BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13755
(612 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 144/181 (79%)
Query: 61 DSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM 120
D + E+ DY GGYHPV IGDL+ RY VIRKLGWGHFSTVWLCWD RFVA+K++
Sbjct: 5 DDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV 64
Query: 121 KSAPQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN 180
KSA YTETA+DEIKLLKCV+E+DP DPN++ +VQL+D+F ISG++G+H+CMV EV G +
Sbjct: 65 KSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHH 124
Query: 181 TYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFEL 240
K ++KSN +G+P+ VK I++Q+L+ L+YLH+KC IIHTDIKPEN+L+ ++ ++ +
Sbjct: 125 LLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRM 184
Query: 241 A 241
A
Sbjct: 185 A 185
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
I VK+ADLGNACW KHF+ DIQTRQYRSIEVL+ +GY T ADIWS ACMAFELATGDYL
Sbjct: 225 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 284
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLH 608
F+PH+ ++R+EDHI I+ L + H
Sbjct: 285 FEPHSGEDYSRDEDHIAHIIELLGSIPRH 313
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
Query: 52 PESDQEKM-EDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKI 110
PE ++E + D ++ E+ DY GGYH V IGDL+ RY VIRKLGWGHFSTVWL WD
Sbjct: 1 PEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQ 60
Query: 111 ATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHI 170
+FVA+K++KSA YTETA+DEI+LLK V+ +DP DPNRE +VQLLD+F ISGV+G HI
Sbjct: 61 GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120
Query: 171 CMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
CMV EV G + K ++KSN +G+PL VK I++Q+L+ L+YLH KC IIHTDIKPEN+LL
Sbjct: 121 CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
Query: 231 GSNNDHIFELA 241
N +I LA
Sbjct: 181 SVNEQYIRRLA 191
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
Query: 511 VNP--AKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVAC 568
VNP K+ + VK+ADLGNACW KHF+ DIQTRQYRS+EVL+ SGY+T ADIWS AC
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 281
Query: 569 MAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFL 602
MAFELATGDYLF+PH+ +TR+EDHI +I+ L
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 133/172 (77%)
Query: 70 DYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET 129
DY GGYH V IGDL+ RY VIRKLGWGHFSTVWL WD +FVA+K++KSA YTET
Sbjct: 4 DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSN 189
A+DEI+LLK V+ +DP DPNRE +VQLLD+F ISGV+G HICMV EV G + K ++KSN
Sbjct: 64 ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 123
Query: 190 NKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+G+PL VK I++Q+L+ L+YLH KC IIHTDIKPEN+LL N +I LA
Sbjct: 124 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 175
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
Query: 511 VNP--AKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVAC 568
VNP K+ + VK+ADLGNACW KHF+ DIQTRQYRS+EVL+ SGY+T ADIWS AC
Sbjct: 206 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 265
Query: 569 MAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFL 602
MAFELATGDYLF+PH+ +TR+EDHI +I+ L
Sbjct: 266 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 299
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 108/165 (65%), Gaps = 4/165 (2%)
Query: 70 DYRVGGYHPVNIGDLY-EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE 128
DYR GGYHP G+ Y + RY ++RKLGWGHFSTVWL D + VA+KI++ YTE
Sbjct: 1 DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 129 TAIDEIKLLKCVQETD---PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLL 185
A DEIKLL+ V + D I++LLD+F G +GVH+ MV EV G N L+
Sbjct: 61 AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 186 LKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
K ++GIPL VK I KQLL L+Y+H +C IIHTDIKPENVL+
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
I +K+ADLGNACW D+H++ IQTR+YRS EVLL + + ADIWS AC+ FEL TGD+L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 580 FDPHTQNGWTRNEDHIGIIMRFL 602
F+P + +T+++DHI I+ L
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELL 257
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 108/165 (65%), Gaps = 4/165 (2%)
Query: 70 DYRVGGYHPVNIGDLY-EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE 128
DYR GG+HP G+ Y + RY ++RKLGWGHFSTVWL D + VA+KI++ YTE
Sbjct: 1 DYRPGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 129 TAIDEIKLLKCVQETD---PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLL 185
A DEIKLL+ V + D I++LLD+F G +GVH+ MV EV G N L+
Sbjct: 61 AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 186 LKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
K ++GIPL VK I KQLL L+Y+H +C IIHTDIKPENVL+
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
I +K+ADLGNACW D+H++ IQTR+YRS EVLL + + ADIWS AC+ FEL TGD+L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 580 FDPHTQNGWTRNEDHIGIIMRFL 602
F+P + +T+++DHI I+ L
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELL 257
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 14/173 (8%)
Query: 75 GYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALKIMKSAPQYTETAIDE 133
G+ ++GD ++RY ++ LG G F V C D + VALKI+K+ +Y E A E
Sbjct: 21 GHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLE 80
Query: 134 IKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGI 193
I +L+ + E DP N+ VQ+ D F G H+C+ E+ G +T+ L +N
Sbjct: 81 INVLEKINEKDPD--NKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPY 134
Query: 194 PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYN 246
P++ V+ + QL +A+++LH+ + HTD+KPEN+L N+D +EL TYN
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILF-VNSD--YEL---TYN 180
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLFD 581
V++ D G+A + +H S + TR YR+ EV+L G+ D+WS+ C+ FE G LF
Sbjct: 195 VRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQ 254
Query: 582 PHTQNGWTRNEDHIGIIMRFL 602
H N +H+ ++ R L
Sbjct: 255 THD------NREHLAMMERIL 269
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 57 EKMEDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRF-V 115
+ M+ S + S + G+ IGD ++RY ++ LG G F V C D + V
Sbjct: 21 QSMQSSKRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQV 80
Query: 116 ALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE 175
ALKI+++ +Y E A EI +LK ++E D + N+ V + D F G H+C+ E
Sbjct: 81 ALKIIRNVGKYREAARLEINVLKKIKEKDKE--NKFLCVLMSDWFNFHG----HMCIAFE 134
Query: 176 VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ G NT++ L ++N + PL +V+ + QL AL +LH + HTD+KPEN+L
Sbjct: 135 LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILF 188
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 489 ERLSHKDKTCKEDNVPSYPRDNVNPAKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRS 548
E L ++ K+C+E +V + +++AD G+A + +H + + TR YR
Sbjct: 194 ETLYNEHKSCEEKSVKN--------------TSIRVADFGSATFDHEHHTTIVATRHYRP 239
Query: 549 IEVLLRSGYDTSADIWSVACMAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFL 602
EV+L G+ D+WS+ C+ FE G LF H N +H+ ++ + L
Sbjct: 240 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH------ENREHLVMMEKIL 287
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 75 GYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRF-VALKIMKSAPQYTETAIDE 133
G+ IGD ++RY ++ LG G F V C D + VALKI+++ +Y E A E
Sbjct: 16 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 75
Query: 134 IKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGI 193
I +LK ++E D + N+ V + D F G H+C+ E+ G NT++ L ++N +
Sbjct: 76 INVLKKIKEKDKE--NKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPY 129
Query: 194 PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
PL +V+ + QL AL +LH + HTD+KPEN+L
Sbjct: 130 PLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILF 165
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 489 ERLSHKDKTCKEDNVPSYPRDNVNPAKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRS 548
E L ++ K+C+E +V + +++AD G+A + +H + + TR YR
Sbjct: 171 ETLYNEHKSCEEKSVKN--------------TSIRVADFGSATFDHEHHTTIVATRHYRP 216
Query: 549 IEVLLRSGYDTSADIWSVACMAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFL 602
EV+L G+ D+WS+ C+ FE G LF H N +H+ ++ + L
Sbjct: 217 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH------ENREHLVMMEKIL 264
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 88/157 (56%), Gaps = 8/157 (5%)
Query: 75 GYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRF-VALKIMKSAPQYTETAIDE 133
G+ IGD ++RY ++ LG G F V C D + VALKI+++ +Y E A E
Sbjct: 7 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 66
Query: 134 IKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGI 193
I +LK ++E D + N+ V + D F G H+C+ E+ G NT++ L ++N +
Sbjct: 67 INVLKKIKEKDKE--NKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPY 120
Query: 194 PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
PL +V+ + QL AL +LH + HTD+KPEN+L
Sbjct: 121 PLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILF 156
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 489 ERLSHKDKTCKEDNVPSYPRDNVNPAKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRS 548
E L ++ K+C+E +V + +++AD G+A + +H + + TR YR
Sbjct: 162 ETLYNEHKSCEEKSVKN--------------TSIRVADFGSATFDHEHHTTIVATRHYRP 207
Query: 549 IEVLLRSGYDTSADIWSVACMAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFL 602
EV+L G+ D+WS+ C+ FE G LF H N +H+ ++ + L
Sbjct: 208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH------ENREHLVMMEKIL 255
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALKIMKSAPQYTETAIDEIKLLKCV 140
GD+ RY ++ LG G F V C D K R VA+KI+K+ +Y E A EI++L+ +
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
TDP R VQ+L+ F G HIC+V E+ G +TY + ++ L +++
Sbjct: 69 NTTDPNSTFR--CVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ Q+ +++ +LH+ + HTD+KPEN+L
Sbjct: 123 MAYQICKSVNFLHSN-KLTHTDLKPENILF 151
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 508 RDNVNPAKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVA 567
R +NP D+K+ D G+A + D+H S + TR YR+ EV+L G+ D+WS+
Sbjct: 169 RTLINP-------DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIG 221
Query: 568 CMAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
C+ E G +F H +++H+ ++ R L H +K
Sbjct: 222 CILIEYYLGFTVFPTHD------SKEHLAMMERILGPLPKHMIQK 260
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALKIMKSAPQYTETAIDEIKLLKCV 140
GD+ RY ++ LG G F V C D K R VA+KI+K+ +Y E A EI++L+ +
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
TDP R VQ+L+ F G HIC+V E+ G +TY + ++ L +++
Sbjct: 69 NTTDPNSTFR--CVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ Q+ +++ +LH+ + HTD+KPEN+L
Sbjct: 123 MAYQICKSVNFLHSN-KLTHTDLKPENILF 151
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 508 RDNVNPAKDICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVA 567
R +NP D+K+ D G+A + D+H S + R YR+ EV+L G+ D+WS+
Sbjct: 169 RTLINP-------DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIG 221
Query: 568 CMAFELATGDYLFDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
C+ E G +F H +++H+ ++ R L H +K
Sbjct: 222 CILIEYYLGFTVFPTHD------SKEHLAMMERILGPLPKHMIQK 260
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 10 KIYY-NLRKKKKQIRLNLSSTRGGRKDKNADDDADSWVDVTSDPESDQEKMEDSNDNEES 68
+IY+ L KK+Q GG + DDD S+V V D +
Sbjct: 57 EIYFLGLNAKKRQ------GMTGGPNNGGYDDDQGSYVQVPHDHVA-------------- 96
Query: 69 KDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE 128
RY V++ +G G F V +D + VALK++++ ++
Sbjct: 97 ------------------YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHR 138
Query: 129 TAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKS 188
A +EI++L+ +++ D N ++ +L+NFT HICM E+ N Y+L+ K+
Sbjct: 139 QAAEEIRILEHLRKQDKD--NTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKN 192
Query: 189 NNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+G L V+ +L+ L+ LH K IIH D+KPEN+LL
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILL 233
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G++C+ + IQ+R YR+ EV+L + Y D+WS+ C+ EL TG
Sbjct: 241 IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 10 KIYY-NLRKKKKQIRLNLSSTRGGRKDKNADDDADSWVDVTSDPESDQEKMEDSNDNEES 68
+IY+ L KK+Q GG + DDD S+V V D +
Sbjct: 57 EIYFLGLNAKKRQ------GMTGGPNNGGYDDDQGSYVQVPHDHVA-------------- 96
Query: 69 KDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE 128
RY V++ +G G F V +D + VALK++++ ++
Sbjct: 97 ------------------YRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHR 138
Query: 129 TAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKS 188
A +EI++L+ +++ D N ++ +L+NFT HICM E+ N Y+L+ K+
Sbjct: 139 QAAEEIRILEHLRKQDKD--NTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKN 192
Query: 189 NNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+G L V+ +L+ L+ LH K IIH D+KPEN+LL
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILL 233
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G++C+ + IQ+R YR+ EV+L + Y D+WS+ C+ EL TG
Sbjct: 241 IKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 10 KIYY-NLRKKKKQIRLNLSSTRGGRKDKNADDDADSWVDVTSDPESDQEKMEDSNDNEES 68
+IY+ L KK+Q GG + DDD S+V V D +
Sbjct: 57 EIYFLGLNAKKRQ------GMTGGPNNGGYDDDQGSYVQVPHDHVA-------------- 96
Query: 69 KDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE 128
RY V++ +G G F V +D + VALK++++ ++
Sbjct: 97 ------------------YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHR 138
Query: 129 TAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKS 188
A +EI++L+ +++ D N ++ +L+NFT HICM E+ N Y+L+ K+
Sbjct: 139 QAAEEIRILEHLRKQDKD--NTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKN 192
Query: 189 NNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+G L V+ +L+ L+ LH K IIH D+KPEN+LL
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALH-KNRIIHCDLKPENILL 233
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G++C+ + IQ+R YR+ EV+L + Y D+WS+ C+ EL TG
Sbjct: 241 IKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ 141
G+ + RY + +G G F V +D++ +VA+KI+K+ + A E++LL+ +
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+ D + + IV L +F H+C+V E+ +N Y LL +N +G+ L +
Sbjct: 90 KHDTE--MKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 143
Query: 202 VKQLLEALEYLHN-KCNIIHTDIKPENVLL 230
+Q+ AL +L + +IIH D+KPEN+LL
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILL 173
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+K+ D G++C + + IQ+R YRS EVLL YD + D+WS+ C+ E+ TG+ LF
Sbjct: 181 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ 141
G+ + RY + +G G F V +D++ +VA+KI+K+ + A E++LL+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+ D + + IV L +F H+C+V E+ +N Y LL +N +G+ L +
Sbjct: 109 KHDTE--MKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 202 VKQLLEALEYLHN-KCNIIHTDIKPENVLL 230
+Q+ AL +L + +IIH D+KPEN+LL
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+K+ D G++C + + IQ+R YRS EVLL YD + D+WS+ C+ E+ TG+ LF
Sbjct: 200 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ 141
G+ + RY + +G G F V +D++ +VA+KI+K+ + A E++LL+ +
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+ D + + IV L +F H+C+V E+ +N Y LL +N +G+ L +
Sbjct: 109 KHDTE--MKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 202 VKQLLEALEYLHN-KCNIIHTDIKPENVLL 230
+Q+ AL +L + +IIH D+KPEN+LL
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+K+ D G++C + + IQ+R YRS EVLL YD + D+WS+ C+ E+ TG+ LF
Sbjct: 200 IKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 82 GDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ 141
G L + VIRK+G G F V LC ++ A+K++++ +YT +A E +LK +Q
Sbjct: 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQ 89
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
D + N K + ++ H+C++ E G + Y+++ ++N G + ++K
Sbjct: 90 NDDINNNNIVK-------YHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLY 142
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV 248
++L+AL YL K ++ HTD+KPEN+LL +D FE +L T +V
Sbjct: 143 CIEILKALNYL-RKMSLTHTDLKPENILL---DDPYFEKSLITVRRV 185
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLFD 581
+KL D G A ++ + I TRQYR+ EV+L G+D S+D+WS C+ EL TG LF
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Query: 582 PH 583
H
Sbjct: 261 TH 262
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAIDEI 134
+G + RY + ++G G + TV+ D + FVALK ++ + + E+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 135 KLLKCVQETDPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGI 193
LL+ ++ + PN +V+L+D S + + +V E + L K+ G+
Sbjct: 63 ALLRRLEAF--EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL 117
Query: 194 PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
P +K +++Q L L++LH C I+H D+KPEN+L+ S
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGG 157
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
VKLAD G A + + T YR+ EVLL+S Y T D+WSV C+ E+ L
Sbjct: 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218
Query: 580 F 580
F
Sbjct: 219 F 219
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE----TAIDEIKLLKCVQET 143
RY + ++G G + TV+ D + FVALK ++ P E + + E+ LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAF 63
Query: 144 DPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
+ PN +V+L+D S + + +V E + L K+ G+P +K ++
Sbjct: 64 --EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+Q L L++LH C I+H D+KPEN+L+ S
Sbjct: 119 RQFLRGLDFLHANC-IVHRDLKPENILVTSGG 149
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
VKLAD G A + D + T YR+ EVLL+S Y T D+WSV C+ E+ L
Sbjct: 151 VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
Query: 580 F 580
F
Sbjct: 211 F 211
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE----TAIDEIKLLKCVQET 143
RY + ++G G + TV+ D + FVALK ++ P E + + E+ LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAF 63
Query: 144 DPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
+ PN +V+L+D S + + +V E + L K+ G+P +K ++
Sbjct: 64 --EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+Q L L++LH C I+H D+KPEN+L+ S
Sbjct: 119 RQFLRGLDFLHANC-IVHRDLKPENILVTSGG 149
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
VKLAD G A + + T YR+ EVLL+S Y T D+WSV C+ E+ L
Sbjct: 151 VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
Query: 580 F 580
F
Sbjct: 211 F 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTE----TAIDEIKLLKCVQET 143
RY + ++G G + TV+ D + FVALK ++ P E + + E+ LL+ ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGEEGLPISTVREVALLRRLEAF 63
Query: 144 DPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
+ PN +V+L+D S + + +V E + L K+ G+P +K ++
Sbjct: 64 --EHPN---VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+Q L L++LH C I+H D+KPEN+L+ S
Sbjct: 119 RQFLRGLDFLHANC-IVHRDLKPENILVTSGG 149
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 522 VKLADLGNA---CWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDY 578
VKLAD G A ++ F + T YR+ EVLL+S Y T D+WSV C+ E+
Sbjct: 151 VKLADFGLARIYSYQMALFPV-VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
Query: 579 LF 580
LF
Sbjct: 210 LF 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQY---TETAIDEIKLLKCVQ 141
+ +RY ++ LG G F V C D+I + A+K++ A T T + E++LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
PN K+ ++L++ + +I L G + ++K K ++ I
Sbjct: 80 H-----PNIMKLFEILEDSS-----SFYIVGELYTGG-ELFDEIIK--RKRFSEHDAARI 126
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+KQ+ + Y+H K NI+H D+KPEN+LL S
Sbjct: 127 IKQVFSGITYMH-KHNIVHRDLKPENILLES 156
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 521 DVKLADLG-NACWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
D+K+ D G + C++ +D I T Y + EVL R YD D+WS + + L +G
Sbjct: 162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYT--ETAIDEIKLLKC 139
++ RY R LG G F V LC DKI + A+K++ + Q T E+ + E++LLK
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ PN I++L + F G + +V EV G + ++ + K +
Sbjct: 107 LDH-----PN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEII--SRKRFSEVDA 152
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN----NDHIFELALKTYNQVLKE 251
I++Q+L + Y+H K I+H D+KPEN+LL S N I + L T+ + K+
Sbjct: 153 ARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYT--ETAIDEIKLLKC 139
++ RY R LG G F V LC DKI + A+K++ + Q T E+ + E++LLK
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ PN I++L + F G + +V EV G + ++ + K +
Sbjct: 106 LDH-----PN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEII--SRKRFSEVDA 151
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN----NDHIFELALKTYNQVLKE 251
I++Q+L + Y+H K I+H D+KPEN+LL S N I + L T+ + K+
Sbjct: 152 ARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA--------------PQYTETAID 132
+ YF +RKLG G + V LC +K A+K++K + ++ E +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNK 191
EI LLK + PN I++L D F + +V E EG ++ ++ N
Sbjct: 96 EISLLKSLDH-----PN---IIKLFDVFE----DKKYFYLVTEFYEGGELFEQII--NRH 141
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ I+KQ+L + YLH K NI+H DIKPEN+LL + N
Sbjct: 142 KFDECDAANIMKQILSGICYLH-KHNIVHRDIKPENILLENKN 183
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYT--ETAIDEIKLLKC 139
++ RY R LG G F V LC DKI + A+K++ + Q T E+ + E++LLK
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ PN I++L + F G + +V EV G + ++ + K +
Sbjct: 83 LDH-----PN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEII--SRKRFSEVDA 128
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN----NDHIFELALKTYNQVLKE 251
I++Q+L + Y+H K I+H D+KPEN+LL S N I + L T+ + K+
Sbjct: 129 ARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET----AIDEIKLLKCVQET 143
RY ++KLG G + V LC DK+ A+KI+K + T + +DE+ +LK +
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH- 63
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTY-KLLLKSNNKGIPLYNVKCI 201
PN K+ + ++ + +V+EV G + +++L+ + + I
Sbjct: 64 ----PNIMKLYEFFED-------KRNYYLVMEVYRGGELFDEIILRQKFSEV---DAAVI 109
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+KQ+L YLH K NI+H D+KPEN+LL S +
Sbjct: 110 MKQVLSGTTYLH-KHNIVHRDLKPENLLLESKS 141
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 48/266 (18%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY + RK+G G F ++L D A VA+K L+CV+ PQ
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK------------------LECVKTKHPQL 51
Query: 148 PNREKIVQLLDNF----TI--SGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
KI +++ TI G G + MV+E+ G + + L ++ L V +
Sbjct: 52 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLL 110
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLG----SNNDHI--FELALKTYNQVLKENLPL 255
Q++ +EY+H+K N IH D+KP+N L+G N +I F LA K + +++P
Sbjct: 111 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 169
Query: 256 LHMRNIP-----SFIQKQLNSNSKDRKMVKYQKYVEKSLSIIVQSYSNLNRKDGEGTAKE 310
+N+ + I L R ++ Y V Y NL +G
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGY--------VLMYFNLGSLPWQGLKAA 221
Query: 311 TNQIKDERNEKSAEVKEEHPREVIVQ 336
T K ++ E+ +E K P EV+ +
Sbjct: 222 T---KRQKYERISEKKMSTPIEVLCK 244
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQY---TETAIDEIKLLKCVQ 141
+ +RY ++ LG G F V C D+I + A+K++ A T T + E++LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
PN K+ ++L++ + +I L G + ++K K ++ I
Sbjct: 80 H-----PNIMKLFEILEDSS-----SFYIVGELYTGG-ELFDEIIK--RKRFSEHDAARI 126
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+KQ+ + Y+H K NI+H D+KPEN+LL S
Sbjct: 127 IKQVFSGITYMH-KHNIVHRDLKPENILLES 156
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 521 DVKLADLG-NACWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
D+K+ D G + C++ +D I T Y + EVL R YD D+WS + + L +G
Sbjct: 162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQY---TETAIDEIKLLKCVQ 141
+ +RY ++ LG G F V C D+I + A+K++ A T T + E++LLK +
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
PN K+ ++L++ + +I L G + ++K K ++ I
Sbjct: 80 H-----PNIMKLFEILEDSS-----SFYIVGELYTGG-ELFDEIIK--RKRFSEHDAARI 126
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+KQ+ + Y+H K NI+H D+KPEN+LL S
Sbjct: 127 IKQVFSGITYMH-KHNIVHRDLKPENILLES 156
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 521 DVKLADLG-NACWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
D+K+ D G + C++ +D I T Y + EVL R YD D+WS + + L +G
Sbjct: 162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 48/266 (18%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY + RK+G G F ++L D A VA+K L+CV+ PQ
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK------------------LECVKTKHPQL 49
Query: 148 PNREKIVQLLDN------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
KI +++ G G + MV+E+ G + + L ++ L V +
Sbjct: 50 HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLL 108
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLG----SNNDHI--FELALKTYNQVLKENLPL 255
Q++ +EY+H+K N IH D+KP+N L+G N +I F LA K + +++P
Sbjct: 109 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 167
Query: 256 LHMRNIP-----SFIQKQLNSNSKDRKMVKYQKYVEKSLSIIVQSYSNLNRKDGEGTAKE 310
+N+ + I L R ++ Y V Y NL +G
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGY--------VLMYFNLGSLPWQGLKAA 219
Query: 311 TNQIKDERNEKSAEVKEEHPREVIVQ 336
T K ++ E+ +E K P EV+ +
Sbjct: 220 T---KRQKYERISEKKMSTPIEVLCK 242
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYT--ETAIDEIKLLKC 139
++ RY R LG G F V LC DKI + A+K++ + Q T E+ + E++LLK
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ PN I +L + F G + +V EV G + ++ + K +
Sbjct: 83 LDH-----PN---IXKLYEFFEDKG----YFYLVGEVYTGGELFDEII--SRKRFSEVDA 128
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN----NDHIFELALKTYNQVLKE 251
I++Q+L + Y H K I+H D+KPEN+LL S N I + L T+ + K+
Sbjct: 129 ARIIRQVLSGITYXH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KPEN+L+ +
Sbjct: 117 LAFCHSH-RVLHRDLKPENLLINTEG 141
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 578 YLF 580
LF
Sbjct: 203 ALF 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KPEN+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPENLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 83 DLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-----IMKSAPQYTETAIDEIKLL 137
D Y Y +IR L G F+ + LC + +F ALK +++ +T++ D+I
Sbjct: 27 DKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKIS-- 82
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGV-----HICMVLE------VEGFNTYKLLL 186
++ N +I+ + N G+ + ++ E + F+ Y +L
Sbjct: 83 --IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 187 KSNNKG-IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
N IP+ +KCI+K +L + Y+HN+ NI H D+KP N+L+ N
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET----AIDEIKLLKCVQET 143
RY ++KLG G + V LC DK+ A+KI+K + T + +DE+ +LK +
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTY-KLLLKSNNKGIPLYNVKCI 201
PN K+ + ++ + +V+EV G + +++L+ + + I
Sbjct: 81 ----PNIMKLYEFFEDKR-------NYYLVMEVYRGGELFDEIILRQKFSEV---DAAVI 126
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+KQ+L YLH K NI+H D+KPEN+LL S +
Sbjct: 127 MKQVLSGTTYLH-KHNIVHRDLKPENLLLESKS 158
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYT--ETAIDEIKLLKC 139
++ RY R LG G F V LC DKI + A+K++ + Q T E+ + E++LLK
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ PN I++L + F G + +V EV G + ++ + K +
Sbjct: 89 LDH-----PN---IMKLYEFFEDKG----YFYLVGEVYTGGELFDEII--SRKRFSEVDA 134
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN----NDHIFELALKTYNQVLKE 251
I++Q+L + Y+H K I+H D+KPEN+LL S N I + L T+ + K+
Sbjct: 135 ARIIRQVLSGITYMH-KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 190
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ------YTETAIDEIKLLKCV 140
+RY + LG G F+TV+ DK + VA+K +K + TA+ EIKLL
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL--- 66
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
Q+ + I+ LLD F H +I +V + ++++K N+ + ++K
Sbjct: 67 -----QELSHPNIIGLLDAFG----HKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKA 116
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ L+ LEYLH I+H D+KP N+LL N
Sbjct: 117 YMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENG 149
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 522 VKLADLGNA---CWRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
+KLAD G A ++ + + TR YR+ E+L + Y D+W+V C+ EL
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 23/148 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID-EIKLLKCVQETDP 145
+ + + LG G FS V+L ++ + ALK +K +P + +++++ EI +LK ++
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK---- 64
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVK---CI 201
E IV L D + + H +V++ V G + +L+ +G+ Y K +
Sbjct: 65 ----HENIVTLEDIYEST----THYYLVMQLVSGGELFDRILE---RGV--YTEKDASLV 111
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVL 229
++Q+L A++YLH I+H D+KPEN+L
Sbjct: 112 IQQVLSAVKYLHEN-GIVHRDLKPENLL 138
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALK---IMKSAPQYTETAIDEIKLLKCVQ 141
+Q+Y + ++G G + V+ D K RFVALK + + I E+ +L+ ++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 142 ETDPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
+ PN +V+L D T+S + +V E + L K G+P +K
Sbjct: 70 TF--EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
++ QLL L++LH+ ++H D+KP+N+L+ S+
Sbjct: 125 MMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG 157
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 522 VKLADLGNACWRDKHF----SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+KLAD G A R F + + T YR+ EVLL+S Y T D+WSV C+ E+
Sbjct: 159 IKLADFGLA--RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 578 YLF 580
LF
Sbjct: 217 PLF 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET---AIDEIKLLKCVQET 143
+ Y ++KLG G + V LC DK+ A+KI++ T + ++E+ +LK +
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH- 95
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN I++L D F + + + E F+ +K N + I+K
Sbjct: 96 ----PN---IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE-----VDAAVIIK 143
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGS 232
Q+L + YLH K NI+H D+KPEN+LL S
Sbjct: 144 QVLSGVTYLH-KHNIVHRDLKPENLLLES 171
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 522 VKLADLG-NACWRD-KHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G +A + + K + T Y + EVL R YD D+WS+ + F L G
Sbjct: 178 IKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAGYPP 236
Query: 580 FDPHT 584
F T
Sbjct: 237 FGGQT 241
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLK----- 138
L+E Y + +G G FS V C ++ + A+KI+ A ++T + + LK
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTEDLKREASI 79
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYN 197
C P IV+LL+ ++ G+ + MV E ++G + ++K + G +Y+
Sbjct: 80 CHMLKHPH------IVELLETYSSDGM----LYMVFEFMDGADLCFEIVKRADAGF-VYS 128
Query: 198 ---VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++Q+LEAL Y H+ NIIH D+KPENVLL S +
Sbjct: 129 EAVASHYMRQILEALRYCHDN-NIIHRDVKPENVLLASKEN 168
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 62 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KPEN+L+ +
Sbjct: 118 LAFCHSH-RVLHRDLKPENLLINTEG 142
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 578 YLF 580
LF
Sbjct: 204 ALF 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KPEN+L+ +
Sbjct: 117 LAFCHSH-RVLHRDLKPENLLINTEG 141
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 578 YLF 580
LF
Sbjct: 203 ALF 205
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALK---IMKSAPQYTETAIDEIKLLKCVQ 141
+Q+Y + ++G G + V+ D K RFVALK + + I E+ +L+ ++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 142 ETDPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
+ PN +V+L D T+S + +V E + L K G+P +K
Sbjct: 70 TF--EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
++ QLL L++LH+ ++H D+KP+N+L+ S+
Sbjct: 125 MMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG 157
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 522 VKLADLGNACWRDKHF----SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+KLAD G A R F + + T YR+ EVLL+S Y T D+WSV C+ E+
Sbjct: 159 IKLADFGLA--RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 578 YLF 580
LF
Sbjct: 217 PLF 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 48 VTSDPESD-QEKMEDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLC 106
+ S PE++ +E++ NEESK R IG R LG G F V+L
Sbjct: 5 LPSAPENNPEEELASKQKNEESKK-RQWALEDFEIG----------RPLGKGKFGNVYLA 53
Query: 107 WDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNREKIVQLLDNFTISGV 165
+K + +ALK++ A E A E +L + V+ ++ + PN I++L F
Sbjct: 54 REKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN---ILRLYGYFH---- 104
Query: 166 HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKP 225
+ ++LE T L+ +K + +L AL Y H+K +IH DIKP
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK-RVIHRDIKP 162
Query: 226 ENVLLGSNND 235
EN+LLGS +
Sbjct: 163 ENLLLGSAGE 172
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 63
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 64 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 120 LAFCHSH-RVLHRDLKPQNLLINTEG 144
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 146 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 578 YLF 580
LF
Sbjct: 206 ALF 208
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 21/156 (13%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQE 142
Q + ++R LG G F V L + R+ A+K++K + E DE +L V
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-- 63
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCI 201
T P I+++ F I M+++ +EG + LL KS P+ K
Sbjct: 64 THP------FIIRMWGTFQ----DAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFY 111
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
++ ALEYLH+K +II+ D+KPEN+LL N HI
Sbjct: 112 AAEVCLALEYLHSK-DIIYRDLKPENILL-DKNGHI 145
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWD-KIATRFVALK---IMKSAPQYTETAIDEIKLLKCVQ 141
+Q+Y + ++G G + V+ D K RFVALK + + I E+ +L+ ++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 142 ETDPQDPNREKIVQLLDNFTISGV-HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
+ PN +V+L D T+S + +V E + L K G+P +K
Sbjct: 70 TF--EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
++ QLL L++LH+ ++H D+KP+N+L+ S+
Sbjct: 125 MMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSG 157
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 522 VKLADLGNACWRDKHF----SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+KLAD G A R F + + T YR+ EVLL+S Y T D+WSV C+ E+
Sbjct: 159 IKLADFGLA--RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 578 YLF 580
LF
Sbjct: 217 PLF 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 48 VTSDPESD-QEKMEDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLC 106
+ S PE++ +E++ NEESK R IG R LG G F V+L
Sbjct: 5 LPSAPENNPEEELASKQKNEESKK-RQWALEDFEIG----------RPLGKGKFGNVYLA 53
Query: 107 WDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNREKIVQLLDNFTISGV 165
+K + +ALK++ A E A E +L + V+ ++ + PN I++L F
Sbjct: 54 REKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN---ILRLYGYFH---- 104
Query: 166 HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKP 225
+ ++LE T L+ +K + +L AL Y H+K +IH DIKP
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK-RVIHRDIKP 162
Query: 226 ENVLLGSNND 235
EN+LLGS +
Sbjct: 163 ENLLLGSAGE 172
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 117 LAFCHSH-RVLHRDLKPQNLLINTEG 141
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 143 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 578 YLF 580
LF
Sbjct: 203 ALF 205
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPQNLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPQNLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 62 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 118 LAFCHSH-RVLHRDLKPQNLLINTEG 142
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 578 YLF 580
LF
Sbjct: 204 ALF 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 62 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 118 LAFCHSH-RVLHRDLKPQNLLINTEG 142
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 578 YLF 580
LF
Sbjct: 204 ALF 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPQNLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-------- 66
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 67 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 123 LAFCHSH-RVLHRDLKPQNLLINTEG 147
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 578 YLF 580
LF
Sbjct: 209 ALF 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LSFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + + S GIPL +K + QLL+
Sbjct: 62 NHPNIVKLLDVIHTEN----KLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 118 LAFCHSH-RVLHRDLKPQNLLINTEG 142
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 578 YLF 580
LF
Sbjct: 204 ALF 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 66
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 67 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 123 LAFCHSH-RVLHRDLKPQNLLINTEG 147
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 578 YLF 580
LF
Sbjct: 209 ALF 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 63
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 64 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 120 LAFCHSH-RVLHRDLKPQNLLINTEG 144
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 146 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 578 YLF 580
LF
Sbjct: 206 ALF 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 117 LAFCHSH-RVLHRDLKPQNLLINTEG 141
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 578 YLF 580
LF
Sbjct: 203 ALF 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 117 LAFCHSH-RVLHRDLKPQNLLINTEG 141
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 578 YLF 580
LF
Sbjct: 203 ALF 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPQNLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 56 QEKMEDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFV 115
+E++ NEESK R IG R LG G F V+L +K + +
Sbjct: 5 EEELASKQKNEESKK-RQWALEDFEIG----------RPLGKGKFGNVYLAREKQSKFIL 53
Query: 116 ALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNREKIVQLLDNFTISGVHGVHICMVL 174
ALK++ A E A E +L + V+ ++ + PN I++L F + ++L
Sbjct: 54 ALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN---ILRLYGYFH----DATRVYLIL 104
Query: 175 EVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
E T L+ +K + +L AL Y H+K +IH DIKPEN+LLGS
Sbjct: 105 EYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAG 162
Query: 235 D 235
+
Sbjct: 163 E 163
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KPEN+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPENLLINTEG 140
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L + Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FP------GTDHIDQLKLILRLVGTPGAELLKK 249
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 48/266 (18%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
+Y + RK+G G F ++L + + VA+K L+CV+ PQ
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIK------------------LECVKTKHPQL 51
Query: 148 PNREKIVQLLDN------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
K +++ G G + MV+E+ G + + L ++ L V +
Sbjct: 52 HIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLL 110
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLG----SNNDHI--FELALKTYNQVLKENLPL 255
Q++ +EY+H+K N IH D+KP+N L+G N +I F LA K + +++P
Sbjct: 111 ADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 169
Query: 256 LHMRNIP-----SFIQKQLNSNSKDRKMVKYQKYVEKSLSIIVQSYSNLNRKDGEGTAKE 310
+N+ + I L R ++ Y V Y NL +G
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGY--------VLMYFNLGSLPWQGLKAA 221
Query: 311 TNQIKDERNEKSAEVKEEHPREVIVQ 336
T K ++ E+ +E K P EV+ +
Sbjct: 222 T---KRQKYERISEKKMSTPIEVLCK 244
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VAL ++ TAI EI LLK +
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK--------EL 59
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 116 LAFCHSH-RVLHRDLKPQNLLINTEG 140
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 578 YLF 580
LF
Sbjct: 202 ALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VAL ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + K + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + + S GIPL +K + QLL+
Sbjct: 63 NHPNIVKLLDVIHTEN----KLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 119 LAFCHSH-RVLHRDLKPQNLLINTEG 143
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + + ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 578 YLF 580
LF
Sbjct: 205 ALF 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 21/153 (13%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA---PQYTETAIDEIKLLKCVQET 143
++Y I K+G G + V+ C ++ + VA+K + P + A+ EI++LK ++
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH- 61
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCI 201
PN +V LL+ F + +V E + + +L L +G+P + VK I
Sbjct: 62 ----PN---LVNLLEVFR----RKRRLHLVFE---YCDHTVLHELDRYQRGVPEHLVKSI 107
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
Q L+A+ + H K N IH D+KPEN+L+ ++
Sbjct: 108 TWQTLQAVNFCH-KHNCIHRDVKPENILITKHS 139
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 519 HIDVKLADLGNA---CWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELA 574
H +KL D G A ++ ++ TR YRS E+L+ + Y D+W++ C+ EL
Sbjct: 138 HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 575 TG 576
+G
Sbjct: 198 SG 199
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + ++ TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 71 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 123 SYCHSK-RVIHRDIKPENLLLGSAGE 147
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 75 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 127 SYCHSK-RVIHRDIKPENLLLGSAGE 151
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN------ 197
E ++ LLD FT + +E FN + L ++ G L N
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKXQK 121
Query: 198 -----VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
V+ ++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 174 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK 260
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 91
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 92 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 132
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 172
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 165 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK 251
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 35/163 (21%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 82
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 83 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 123
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N+ + +++
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSE 165
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK 255
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 35/163 (21%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 87 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 127
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N+ + +++
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSE 169
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK---SAPQYTETAIDEIKLLKCVQETDPQDP 148
+ K+G G + V+ +K+ VALK ++ TAI EI LLK +
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK--------EL 58
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N IV+LLD + +V E + + S GIPL +K + QLL+
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
L + H+ ++H D+KP+N+L+ +
Sbjct: 115 LAFCHSH-RVLHRDLKPQNLLINTEG 139
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSGY-DTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ E+LL Y T+ DIWS+ C+ E+ T
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 578 YLF 580
LF
Sbjct: 201 ALF 203
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 186 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 246 FP------GTDHIDQLKLILRLVGTPGAELLKK 272
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 103
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 104 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 144
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 184
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK 254
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 86 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 126
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 166
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 165 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 225 FP------GTDHIDQLKLILRLVGTPGAELLKK 251
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 82
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 83 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 123
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 163
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 71
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 72 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 123
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 124 SYCHSK-RVIHRDIKPENLLLGSAGE 148
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 75 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 127 SYCHSK-RVIHRDIKPENLLLGSAGE 151
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN------ 197
E ++ LLD FT + +E FN + L ++ G L N
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKXQK 121
Query: 198 -----VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
V+ ++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 71
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 72 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 123
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 124 SYCHSK-RVIHRDIKPENLLLGSAGE 148
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 174 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 234 FPG------TDHIDQLKLILRLVGTPGAELLKK 260
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 91
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 92 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 132
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 172
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK 254
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 86 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 126
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 166
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 75 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 126
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 127 SYCHSK-RVIHRDIKPENLLLGSAGE 151
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 183 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 243 FP------GTDHIDQLKLILRLVGTPGAELLKK 269
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 100
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 101 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 141
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 181
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 73 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 125 SYCHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 71 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 123 SYCHSK-RVIHRDIKPENLLLGSAGE 147
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 175 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK 261
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKH- 92
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 93 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 133
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 173
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 165 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK 251
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 82
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 83 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 123
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 163
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 71 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 122
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 123 SYCHSK-RVIHRDIKPENLLLGSAGE 147
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 182 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 242 FP------GTDHIDQLKLILRLVGTPGAELLKK 268
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 99
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 100 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 140
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 180
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALK---IMKSAPQYTETAIDEIKLLKCVQETDPQD 147
V +K+G G+F + L + +VA+K I APQ K L E PQ
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQ-LHLEYRFYKQLGSAGEGLPQ- 61
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
G G + MVLE+ G + + L ++ L V I QLL
Sbjct: 62 ------------VYYFGPXGKYNAMVLELLG-PSLEDLFDLCDRTFTLKTVLMIAIQLLS 108
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELAL 242
+EY+H+K N+I+ D+KPEN L+G + HI + L
Sbjct: 109 RMEYVHSK-NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGL 148
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 182 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 242 FP------GTDHIDQLKLILRLVGTPGAELLKK 268
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 99
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 100 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 140
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 229 FPG------TDHIDQLKLILRLVGTPGAELLKK 255
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 87 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 127
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 165 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 225 FPG------TDHIDQLKLILRLVGTPGAELLKK 251
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 82
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 83 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 123
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 163
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 183 ELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 243 FP------GTDHIDQLKLILRLVGTPGAELLKK 269
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 100
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 101 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 141
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 181
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK 254
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 86 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 126
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 166
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVT 604
F T + D + +I+R + T
Sbjct: 229 FPG------TDHIDQLKLILRLVGT 247
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 87 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 127
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 167
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 183 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 243 FP------GTDHIDQLKLILRLVGTPGAELLKK 269
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 100
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 101 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 141
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 181
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 162 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 222 FPG------TDHIDQLKLILRLVGTPGAELLKK 248
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 79
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 80 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 120
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 160
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 170 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK 256
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 87
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 88 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 128
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 168
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 175 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK 261
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 92
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 93 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 133
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 173 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 232
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 233 FPG------TDHIDQLKLILRLVGTPGAELLKK 259
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 90
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 91 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 131
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 171
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVT 604
F T + D + +I+R + T
Sbjct: 229 FPG------TDHIDQLKLILRLVGT 247
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 87 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 127
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 167
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 175 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 235 FPG------TDHIDQLKLILRLVGTPGAELLKK 261
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 92
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 93 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 133
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 70 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 122 SYCHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 73 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 124
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 125 SYCHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 159 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK 245
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 76
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 77 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 117
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 157
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 159 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK 245
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 76
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 77 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 117
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 157
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 159 ELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK 245
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 76
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 77 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 117
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 157
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 168 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 228 FPG------TDHIDQLKLILRLVGTPGAELLKK 254
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 86 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 126
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 166
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 160 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK 246
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 77
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 78 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 118
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 158
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 160 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 220 FPG------TDHIDQLKLILRLVGTPGAELLKK 246
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 77
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 78 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 118
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
I++L F + ++LE T L+ +K + +L AL
Sbjct: 70 ---ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANAL 121
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGS +
Sbjct: 122 SYCHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCV 140
IG + +RY ++ KLG G STV+L D I VA+K + P+ E + +
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFER---- 60
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKC 200
+ + + + IV ++D V C L +E L + G PL
Sbjct: 61 EVHNSSQLSHQNIVSMID------VDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTA 113
Query: 201 I--VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND-HIFELAL 242
I Q+L+ +++ H+ I+H DIKP+N+L+ SN IF+ +
Sbjct: 114 INFTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIFDFGI 157
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 161 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 221 FPG------TDHIDQLKLILRLVGTPGAELLKK 247
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 78
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 79 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 119
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 159
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKS-APQYTETAIDEIKLLKCVQETDPQD 147
V +K+G G+F + L + +VA+K+ MKS APQ E + K + D
Sbjct: 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGDG-- 66
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ G G + MVLE+ G + + L ++ L V I QL+
Sbjct: 67 ---------IPQVYYFGPCGKYNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELAL 242
+EY+H+K N+I+ D+KPEN L+G + HI + AL
Sbjct: 117 RMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLLKCVQETDPQDPNR 150
RKLG G F V L ++ + +K I K Q I+ EI++LK + PN
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH-----PNI 82
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN--VKCIVKQLLEA 208
KI ++ +++ H ++I M EG + ++ + +G L V ++KQ++ A
Sbjct: 83 IKIFEVFEDY-----HNMYIVME-TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDH 236
L Y H++ +++H D+KPEN+L + H
Sbjct: 137 LAYFHSQ-HVVHKDLKPENILFQDTSPH 163
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 26/161 (16%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKS-APQYTETAIDEIKLLKCVQETDPQD 147
V +K+G G+F + L + +VA+K+ MKS APQ E + K + D
Sbjct: 34 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGDG-- 87
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ G G + MVLE+ G + + L ++ L V I QL+
Sbjct: 88 ---------IPQVYYFGPCGKYNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLIS 137
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELAL 242
+EY+H+K N+I+ D+KPEN L+G + HI + AL
Sbjct: 138 RMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 177
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + D+WSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 34/164 (20%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y Q+Y + LG G F VW DK + V +K +K K +++
Sbjct: 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE--------------KVLEDCW 67
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEV---EGFNTYKLLLKSNNKGIPLYN---- 197
+DP K+ L+ +S V +I VL++ +GF ++L+++ + G+ L+
Sbjct: 68 IEDPKLGKVT--LEIAILSRVEHANIIKVLDIFENQGF--FQLVMEKHGSGLDLFAFIDR 123
Query: 198 --------VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
I +QL+ A+ YL K +IIH DIK EN+++ +
Sbjct: 124 HPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAED 166
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
H +VKLAD G A D R+ + T + + EV+ +S YD+ ADIWS+ A ELA
Sbjct: 160 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 219
Query: 576 GDYLFDPHTQ 585
G+ PH++
Sbjct: 220 GE---PPHSE 226
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E+ + + K+G G F V+ D + VA+KI+ E + ++ Q P
Sbjct: 26 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL--YNVKCIVK 203
+ + S + + +++E G + LL+ PL + I++
Sbjct: 86 Y----------VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILR 131
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++L+ L+YLH++ IH DIK NVLL + +
Sbjct: 132 EILKGLDYLHSEKK-IHRDIKAANVLLSEHGE 162
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 159 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 219 FPG------TDHIDQLKLILRLVGTPGAELLKK 245
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 76
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 77 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCAK 117
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 157
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 72
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 73 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 126
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 127 CHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L + IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLCGIKHL--------HSAGIIHRDLKPSNIVVKSD 162
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 72
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 73 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 126
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 127 CHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 73
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 74 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 127
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 128 CHSK-RVIHRDIKPENLLLGSAGE 150
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 72
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 73 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 126
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 127 CHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
H +VKLAD G A D R+ + T + + EV+ +S YD+ ADIWS+ A ELA
Sbjct: 155 HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 214
Query: 576 GDYLFDPHTQ 585
G+ PH++
Sbjct: 215 GE---PPHSE 221
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E+ + + K+G G F V+ D + VA+KI+ E + ++ Q P
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL--YNVKCIVK 203
+ + S + + +++E G + LL+ PL + I++
Sbjct: 81 ----------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILR 126
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++L+ L+YLH++ IH DIK NVLL + +
Sbjct: 127 EILKGLDYLHSEKK-IHRDIKAANVLLSEHGE 157
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
H +VKLAD G A D R+ + T + + EV+ +S YD+ ADIWS+ A ELA
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 199
Query: 576 GDYLFDPHTQ 585
G+ PH++
Sbjct: 200 GE---PPHSE 206
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E+ + + K+G G F V+ D + VA+KI+ E + ++ Q P
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL--YNVKCIVK 203
+ + S + + +++E G + LL+ PL + I++
Sbjct: 66 ----------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILR 111
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++L+ L+YLH++ IH DIK NVLL + +
Sbjct: 112 EILKGLDYLHSEKK-IHRDIKAANVLLSEHGE 142
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
H +VKLAD G A D R+ + T + + EV+ +S YD+ ADIWS+ A ELA
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 199
Query: 576 GDYLFDPHTQ 585
G+ PH++
Sbjct: 200 GE---PPHSE 206
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E+ + + K+G G F V+ D + VA+KI+ E + ++ Q P
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL--YNVKCIVK 203
+ + S + + +++E G + LL+ PL + I++
Sbjct: 66 ----------YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILR 111
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++L+ L+YLH++ IH DIK NVLL + +
Sbjct: 112 EILKGLDYLHSEKK-IHRDIKAANVLLSEHGE 142
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN-- 72
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 73 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 126
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 127 CHSK-RVIHRDIKPENLLLGSAGE 149
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F S + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFHDS----TRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-KVIHRDIKPENLLLGSAGE 146
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 4 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 63
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 64 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 115
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 116 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 164
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 167 LKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 226
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 227 F-PGTDHIDQWNKVIEQLG 244
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATG 576
++KLAD G A + K + ++ T YR ++LL S Y T D+W V C+ +E+ATG
Sbjct: 138 ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
Query: 577 DYLFDPHTQNGWTRNEDHIGIIMRFLVT 604
LF T E+ + I R L T
Sbjct: 198 RPLFPGSTV------EEQLHFIFRILGT 219
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK-----SAPQYTETAIDEIKLLKCVQ 141
+ Y + KLG G ++TV+ K+ VALK ++ AP TAI E+ LLK
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC---TAIREVSLLK--- 55
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
D IV L D + +V E + + L N I ++NVK
Sbjct: 56 -----DLKHANIVTLHDIIHTEK----SLTLVFEYLDKDLKQYLDDCGNI-INMHNVKLF 105
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKENLP 254
+ QLL L Y H + ++H D+KP+N+L+ EL L + +++P
Sbjct: 106 LFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERG----ELKLADFGLARAKSIP 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 68
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 69 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 122
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 123 CHSK-RVIHRDIKPENLLLGSAGE 145
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 69
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 70 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 123
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 124 CHSK-RVIHRDIKPENLLLGSAGE 146
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 186 ELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 246 FPG------TDHIDQLKLILRLVGTPGAELLKK 272
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 103
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 104 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 144
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 184
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+K V N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKVV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLY-------QMLVGIKHLHS-AGIIHRDLKPSNIVVKSD 162
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 7 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 66
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 67 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 118
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 119 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 167
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + D+WSV C+ E+ L
Sbjct: 170 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 229
Query: 580 F 580
F
Sbjct: 230 F 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L + IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLCGIKHL--------HSAGIIHRDLKPSNIVVKSD 162
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 114 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 62
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+KCV N + I+ LL+ FT + V+I M +++
Sbjct: 63 QNQTHAKRAYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 114
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 115 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 163
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 225
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 226 F-PGTDHIDQWNKVIEQLG 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+K V N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKVV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY + C +K L + IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLCGIKHL--------HSAGIIHRDLKPSNIVVKSD 162
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLK----- 138
L+E Y + +G G FS V C ++ + A+KI+ A ++T + + LK
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTEDLKREASI 79
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYN 197
C P IV+LL+ ++ G+ + MV E ++G + ++K + G +Y+
Sbjct: 80 CHMLKHPH------IVELLETYSSDGM----LYMVFEFMDGADLCFEIVKRADAGF-VYS 128
Query: 198 ---VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++Q+LEAL Y H+ NIIH D+KP VLL S +
Sbjct: 129 EAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKEN 168
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 20/150 (13%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEV----EGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
I++L F + ++LE E + + L K + + Y + +L
Sbjct: 75 ---ILRLYGYFH----DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY-----ITEL 122
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNND 235
AL Y H+K +IH DIKPEN+LLGS +
Sbjct: 123 ANALSYCHSK-RVIHRDIKPENLLLGSAGE 151
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 192 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
Query: 580 F 580
F
Sbjct: 252 F 252
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D + +A+K + Q + + E++LLK ++
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMK-- 108
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 109 ------HENVIGLLDVFTPAT----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 150
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 190
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 20/150 (13%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPN 149
+ R LG G F V+L +K + +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEV----EGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
I++L F + ++LE E + + L K + + Y + +L
Sbjct: 75 ---ILRLYGYFH----DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY-----ITEL 122
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNND 235
AL Y H+K +IH DIKPEN+LLGS +
Sbjct: 123 ANALSYCHSK-RVIHRDIKPENLLLGSAGE 151
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLK----- 138
L+E Y + +G G FS V C ++ + A+KI+ A ++T + + LK
Sbjct: 23 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTEDLKREASI 81
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYN 197
C P IV+LL+ ++ G+ + MV E ++G + ++K + G +Y+
Sbjct: 82 CHMLKHPH------IVELLETYSSDGM----LYMVFEFMDGADLCFEIVKRADAGF-VYS 130
Query: 198 ---VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++Q+LEAL Y H+ NIIH D+KP VLL S +
Sbjct: 131 EAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKEN 170
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L ++ + +ALK++ E A E +L + V+ ++ + PN
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSHLRHPN-- 73
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
I++L F + ++LE T Y+ L K + + +L AL
Sbjct: 74 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 211 YLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGSN +
Sbjct: 127 YCHSK-RVIHRDIKPENLLLGSNGE 150
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L ++ + +ALK++ E A E +L + V+ ++ + PN
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSHLRHPN-- 73
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
I++L F + ++LE T Y+ L K + + +L AL
Sbjct: 74 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 211 YLHNKCNIIHTDIKPENVLLGSNND 235
Y H+K +IH DIKPEN+LLGSN +
Sbjct: 127 YCHSK-RVIHRDIKPENLLLGSNGE 150
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 24/147 (16%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLLKCVQETDPQDPNREK 152
LG G FS V L +K + A+K I K A + E++I+ EI +L+ ++ E
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK--------HEN 81
Query: 153 IVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVK---CIVKQLLEA 208
IV L D + H+ +V++ V G + +++ KG Y K +++Q+L+A
Sbjct: 82 IVALEDIYESPN----HLYLVMQLVSGGELFDRIVE---KG--FYTEKDASTLIRQVLDA 132
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNND 235
+ YLH + I+H D+KPEN+L S ++
Sbjct: 133 VYYLH-RMGIVHRDLKPENLLYYSQDE 158
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ EV+L Y+ + DIWSV C+ E+ TG L
Sbjct: 164 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 223
Query: 580 F 580
F
Sbjct: 224 F 224
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQETDPQDPNRE 151
+G G + +V DK + VA+K + Q + + A E+ LLK +Q E
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--------HE 83
Query: 152 KIVQLLDNFT----ISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
++ LLD FT + + ++ M L S K ++ +V Q+L+
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK------IQYLVYQMLK 137
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND 235
L+Y+H+ ++H D+KP N L N D
Sbjct: 138 GLKYIHS-AGVVHRDLKPGN--LAVNED 162
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ EV+L Y+ + DIWSV C+ E+ TG L
Sbjct: 182 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL 241
Query: 580 F 580
F
Sbjct: 242 F 242
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQETDPQDPNRE 151
+G G + +V DK + VA+K + Q + + A E+ LLK +Q E
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--------HE 101
Query: 152 KIVQLLDNFT----ISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
++ LLD FT + + ++ M + S K ++ +V Q+L+
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK------IQYLVYQMLK 155
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND 235
L+Y+H+ ++H D+KP N L N D
Sbjct: 156 GLKYIHS-AGVVHRDLKPGN--LAVNED 180
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A +F + + TR YR+ EV+L GY + DIWSV C+ EL G +
Sbjct: 163 LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 222
Query: 580 F 580
F
Sbjct: 223 F 223
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY ++ +G G V +D + VA+K + Q + + A E+ LLKCV
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV--- 78
Query: 144 DPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNV 198
N + I+ LL+ FT + V++ M +++ + L LY +
Sbjct: 79 -----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 133
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
C +K L + IIH D+KP N+++ S+
Sbjct: 134 LCGIKHL--------HSAGIIHRDLKPSNIVVKSD 160
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLL 137
+I D+Y+ R LG G FS V L DK + VA+K I K A + E +++ EI +L
Sbjct: 15 DIRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL-Y 196
++ PN + LD+ SG H +++ M L G +L + KG
Sbjct: 71 HKIKH-----PN----IVALDDIYESGGH-LYLIMQLVSGG----ELFDRIVEKGFYTER 116
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ ++ Q+L+A++YLH+ I+H D+KPEN+L
Sbjct: 117 DASRLIFQVLDAVKYLHD-LGIVHRDLKPENLL 148
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 26/161 (16%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKS-APQYTETAIDEIKLLKCVQETDPQD 147
V +K+G G+F + L + +VA+K+ MKS APQ E + K + D
Sbjct: 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGDG-- 66
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ G G + MVLE+ G + + L ++ L V I QL+
Sbjct: 67 ---------IPQVYYFGPCGKYNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELAL 242
+EY+H+K N+I+ D+KPEN L+G + HI + L
Sbjct: 117 RMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGL 156
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 22/156 (14%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLL 137
+I D+Y+ R LG G FS V L DK + VA+K I K A + E +++ EI +L
Sbjct: 15 DIRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL-Y 196
++ PN + LD+ SG H +++ M L G +L + KG
Sbjct: 71 HKIKH-----PN----IVALDDIYESGGH-LYLIMQLVSGG----ELFDRIVEKGFYTER 116
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+ ++ Q+L+A++YLH+ I+H D+KPEN+L S
Sbjct: 117 DASRLIFQVLDAVKYLHD-LGIVHRDLKPENLLYYS 151
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 22/153 (14%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLL 137
+I D+Y+ R LG G FS V L DK + VA+K I K A + E +++ EI +L
Sbjct: 15 DIRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL-Y 196
++ PN + LD+ SG H +++ M L G +L + KG
Sbjct: 71 HKIKH-----PN----IVALDDIYESGGH-LYLIMQLVSGG----ELFDRIVEKGFYTER 116
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ ++ Q+L+A++YLH+ I+H D+KPEN+L
Sbjct: 117 DASRLIFQVLDAVKYLHD-LGIVHRDLKPENLL 148
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 22/156 (14%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAID-EIKLL 137
+I D+Y+ R LG G FS V L DK + VA+K I K A + E +++ EI +L
Sbjct: 15 DIRDIYDFR----DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL-Y 196
++ PN + LD+ SG H +++ M L G +L + KG
Sbjct: 71 HKIKH-----PN----IVALDDIYESGGH-LYLIMQLVSGG----ELFDRIVEKGFYTER 116
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+ ++ Q+L+A++YLH+ I+H D+KPEN+L S
Sbjct: 117 DASRLIFQVLDAVKYLHD-LGIVHRDLKPENLLYYS 151
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 35/163 (21%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN------ 197
E ++ LLD FT + +E FN + L ++ G L N
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKSQK 121
Query: 198 -----VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
V+ ++ Q+L L+Y+H+ +IIH D+KP N+ + +++
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSE 163
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V IGD +RY ++ +G G V +D I R VA+K + Q + +
Sbjct: 4 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 63
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V+I M +++ ++
Sbjct: 64 AYRELVLMKCV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 115
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 156
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + D+WSV C+ E+ L
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 218
Query: 580 F 580
F
Sbjct: 219 F 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ-YTETAIDEIKLL 137
V++GD +++Y K+G G TV+ D + VA++ M Q E I+EI ++
Sbjct: 13 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE--VEGFNTYKLLLKSNNKGIPL 195
+ + ++PN IV LD++ + G + +V+E G T + ++G
Sbjct: 72 R-----ENKNPN---IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
+ + ++ L+ALE+LH+ +IH DIK +N+LLG
Sbjct: 117 -QIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ-ETDPQDPNRE 151
R LG G F V+L +K +ALK++ A E A E +L + V+ ++ + PN
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN-- 66
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
I++L F + ++LE T L+ +K + +L AL Y
Sbjct: 67 -ILRLYGYFH----DATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 120
Query: 212 LHNKCNIIHTDIKPENVLLGSNND 235
H+K +IH DIKPEN+LLGS +
Sbjct: 121 CHSK-RVIHRDIKPENLLLGSAGE 143
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ-YTETAIDEIKLL 137
V++GD +++Y K+G G TV+ D + VA++ M Q E I+EI ++
Sbjct: 13 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKS-NNKGIPL 195
+ + ++PN IV LD++ + G + +V+E + G + ++ ++ ++G
Sbjct: 72 R-----ENKNPN---IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
+ + ++ L+ALE+LH+ +IH DIK +N+LLG
Sbjct: 117 -QIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ-YTETAIDEIKLL 137
V++GD +++Y K+G G TV+ D + VA++ M Q E I+EI ++
Sbjct: 13 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE--VEGFNTYKLLLKSNNKGIPL 195
+ + ++PN IV LD++ + G + +V+E G T + ++G
Sbjct: 72 R-----ENKNPN---IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEG--- 116
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
+ + ++ L+ALE+LH+ +IH DIK +N+LLG
Sbjct: 117 -QIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 521 DVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
DVKLAD G A D R+ + T + + EV+ +S YD+ ADIWS+ A ELA G+
Sbjct: 158 DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLL 137
NI D E+ + + ++G G F V+ D + VA+KI ++ A E EI +L
Sbjct: 17 NIAD-PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPL-- 195
+ + + S + G + +++E G + LL++ P
Sbjct: 76 SQCDSS------------YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG----PFDE 119
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ + ++K++L+ L+YLH++ IH DIK NVLL D
Sbjct: 120 FQIATMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGD 158
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ G A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 223 FPG------TDHIDQLKLILRLVGTPGAELLKK 249
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ-YTETAIDEIKLL 137
V++GD +++Y K+G G TV+ D + VA++ M Q E I+EI ++
Sbjct: 14 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKS-NNKGIPL 195
+ + ++PN IV LD++ + G + +V+E + G + ++ ++ ++G
Sbjct: 73 R-----ENKNPN---IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEG--- 117
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
+ + ++ L+ALE+LH+ +IH DIK +N+LLG
Sbjct: 118 -QIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 151
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A D + TR YR+ EV+L Y + DIWSV C+ E+ TG L
Sbjct: 166 ELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
Query: 580 F 580
F
Sbjct: 226 F 226
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQETDPQDP 148
++ +G G + V D VA+K + Q + + A E++LLK ++
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH------ 83
Query: 149 NREKIVQLLDNFTISGV--HGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
E ++ LLD FT +V+ G + KL+ ++ + ++ +V Q+L
Sbjct: 84 --ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM---KHEKLGEDRIQFLVYQML 138
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ L Y+H IIH D+KP N L N D
Sbjct: 139 KGLRYIH-AAGIIHRDLKPGN--LAVNED 164
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 170 ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK 256
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 87
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 88 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 128
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 168
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 522 VKLADLG---NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDY 578
+K+ D G AC + + + TR YR+ EV+L GY + DIWSV C+ EL G
Sbjct: 165 LKILDFGLARTAC-TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV 223
Query: 579 LF 580
+F
Sbjct: 224 IF 225
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY ++ +G G V +D + VA+K + Q + + A E+ LLKCV
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV--- 80
Query: 144 DPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNV 198
N + I+ LL+ FT + V++ M +++ + L LY +
Sbjct: 81 -----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 135
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
C +K L A IIH D+KP N+++ S+
Sbjct: 136 LCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 170 ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK 256
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 87
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 88 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 128
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 168
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D G A + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 170 ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVTSDLHTCEK 612
F T + D + +I+R + T +K
Sbjct: 230 FPG------TDHIDQLKLILRLVGTPGAELLKK 256
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 87
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 88 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 128
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 168
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLY-------QMLXGIKHLHS-AGIIHRDLKPSNIVVKSD 162
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 108 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 159
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 200
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
Query: 580 F 580
F
Sbjct: 263 F 263
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATG 576
H V+++DLG AC + K + T Y + EVL + YD+SAD +S+ CM F+L G
Sbjct: 327 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
Query: 577 DYLFDPH 583
F H
Sbjct: 387 HSPFRQH 393
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATG 576
H V+++DLG AC + K + T Y + EVL + YD+SAD +S+ CM F+L G
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 577 DYLFDPH 583
F H
Sbjct: 388 HSPFRQH 394
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATG 576
H V+++DLG AC + K + T Y + EVL + YD+SAD +S+ CM F+L G
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 577 DYLFDPH 583
F H
Sbjct: 388 HSPFRQH 394
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 519 HIDVKLADLGNAC-WRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATG 576
H V+++DLG AC + K + T Y + EVL + YD+SAD +S+ CM F+L G
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
Query: 577 DYLFDPH 583
F H
Sbjct: 388 HSPFRQH 394
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++++ D G A D+ + + TR YR+ E++L Y+ + DIWSV C+ EL G L
Sbjct: 169 ELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 580 F 580
F
Sbjct: 229 F 229
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
QR +R +G G + +V +D + VA+K + Q + E++LLK ++
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH- 86
Query: 144 DPQDPNREKIVQLLDNFT----ISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVK 199
E ++ LLD FT I V++ L N ++KS + + +V+
Sbjct: 87 -------ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN---IVKS--QALSDEHVQ 134
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+V QLL L+Y+H+ IIH D+KP NV + +++
Sbjct: 135 FLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSE 169
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET---AIDEIKLLKCVQETDPQDPN 149
++LG G F+ V C K + A K +K + + + EI +L+ + ++ P+ N
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE-LAKSCPRVIN 93
Query: 150 REKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
++ + + I ++LE G + L L + + +V ++KQ+LE
Sbjct: 94 LHEVYE----------NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS 232
+ YLH NI+H D+KP+N+LL S
Sbjct: 144 VYYLHQN-NIVHLDLKPQNILLSS 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ +VL+ S Y TS DIWS+ C+ E+ TG
Sbjct: 158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 578 YLF 580
LF
Sbjct: 218 PLF 220
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
++Y + K+G G + V+ D R VALK ++ + TAI EI LLK +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH- 78
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIV 202
PN IV L+D +H C+ L E K +L N G+ +K +
Sbjct: 79 ----PN---IVSLIDV-----IHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
QLL + + H I+H D+KP+N+L+ N+D +LA
Sbjct: 126 YQLLRGVAHCHQH-RILHRDLKPQNLLI--NSDGALKLA 161
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++++ D G A D+ + + TR YR+ E++L Y+ + DIWSV C+ EL G L
Sbjct: 169 ELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 580 F 580
F
Sbjct: 229 F 229
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 35/163 (21%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
QR +R +G G + +V +D + VA+K + Q + E++LLK ++
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-- 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E F+ ++ L + G L N VKC
Sbjct: 86 ------HENVIGLLDVFTPA----------TSIEDFS--EVYLVTTLMGADLNNIVKCQA 127
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+V QLL L+Y+H+ IIH D+KP NV + +++
Sbjct: 128 LSDEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDSE 169
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATGD 577
+KLAD G A + ++ ++ T YR+ +VL+ S Y TS DIWS+ C+ E+ TG
Sbjct: 158 LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
Query: 578 YLF 580
LF
Sbjct: 218 PLF 220
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
++Y + K+G G + V+ D R VALK ++ + TAI EI LLK +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH- 78
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIV 202
PN IV L+D +H C+ L E K +L N G+ +K +
Sbjct: 79 ----PN---IVSLIDV-----IHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
QLL + + H I+H D+KP+N+L+ N+D +LA
Sbjct: 126 YQLLRGVAHCHQH-RILHRDLKPQNLLI--NSDGALKLA 161
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 63 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 114
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 115 ELDHERMSYLLY-------QMLXGIKHLHS-AGIIHRDLKPSNIVVKSD 155
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 580 F 580
F
Sbjct: 218 F 218
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 108 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 159
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 200
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
Query: 580 F 580
F
Sbjct: 263 F 263
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 68
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 69 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 120
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 121 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 161
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 164 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 223
Query: 580 F 580
F
Sbjct: 224 F 224
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++++ D G A D+ + + TR YR+ E++L Y+ + DIWSV C+ EL G L
Sbjct: 161 ELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 580 F 580
F
Sbjct: 221 F 221
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 35/156 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
QR +R +G G + +V +D + VA+K + Q + E++LLK ++
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH- 78
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E F+ ++ L + G L N VKC
Sbjct: 79 -------ENVIGLLDVFTPAT----------SIEDFS--EVYLVTTLMGADLNNIVKCQA 119
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENV 228
+V QLL L+Y+H+ IIH D+KP NV
Sbjct: 120 LSDEHVQFLVYQLLRGLKYIHS-AGIIHRDLKPSNV 154
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 71 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 122
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 163
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 580 F 580
F
Sbjct: 226 F 226
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 71 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 122
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 163
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 580 F 580
F
Sbjct: 226 F 226
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK--SAPQYTETAIDEIKLLKCVQETDPQDPN 149
+ KLG G ++TV+ +K +VALK +K S TAI EI L+K ++
Sbjct: 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH------- 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLL----LKSNNKGIPLYNVKCIVKQL 205
E IV+L D + +V E + K + + + +G+ L VK QL
Sbjct: 63 -ENIVRLYDVIHTEN----KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
L+ L + H I+H D+KP+N+L+
Sbjct: 118 LQGLAFCHEN-KILHRDLKPQNLLI 141
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATGD 577
+KL D G A FS ++ T YR+ +VL+ S Y TS DIWS C+ E+ TG
Sbjct: 147 LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
Query: 578 YLF 580
LF
Sbjct: 207 PLF 209
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 64 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 115
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 156
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 580 F 580
F
Sbjct: 219 F 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 521 DVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLR-SGYDTSADIWSVACMAFELATGDYL 579
++K+ D A D + + TR YR+ E++L Y+ + DIWSV C+ EL TG L
Sbjct: 163 ELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 580 FDPHTQNGWTRNEDHIGIIMRFLVT 604
F T + D + +I+R + T
Sbjct: 223 FPG------TDHIDQLKLILRLVGT 241
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 37/163 (22%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQET 143
+RY + +G G + +V +D VA+K + Q + + E++LLK ++
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH- 80
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN-VKC-- 200
E ++ LLD FT + +E FN + L ++ G L N VKC
Sbjct: 81 -------ENVIGLLDVFTPAR----------SLEEFN--DVYLVTHLMGADLNNIVKCQK 121
Query: 201 --------IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ Q+L L+Y+H+ +IIH D+KP N L N D
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSN--LAVNED 161
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++ + RK+G G F ++L + VA+K L+ V+ PQ
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------------LENVKTKHPQL 49
Query: 148 PNREKIVQLLDNFTI------SGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
KI ++L T GV G + +V+++ G + + L ++ + L V +
Sbjct: 50 LYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG-PSLEDLFNFCSRKLSLKTVLML 108
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLG----SNNDHI--FELALKTYNQVLKENLPL 255
Q++ +E++H+K + +H DIKP+N L+G +N +I F LA K + +++P
Sbjct: 109 ADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPY 167
Query: 256 LHMRNI 261
+N+
Sbjct: 168 RENKNL 173
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 521 DVKLADLGNAC-WRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
DVKLAD G A D R+ + T + + EV+ +S YD ADIWS+ A ELA G+
Sbjct: 154 DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ I++++L+ L+YLH++ I H DIK NVLL D
Sbjct: 118 IATILREILKGLDYLHSERKI-HRDIKAANVLLSEQGD 154
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETDPQDPN 149
++ +LG G F V+ +K A K++++ + + E I EI++L +
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--------D 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV+LL + H + +++E ++ ++G+ ++ + +Q+LEAL
Sbjct: 75 HPYIVKLLGAY----YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
+LH+K IIH D+K NVL+ D
Sbjct: 131 NFLHSK-RIIHRDLKAGNVLMTLEGD 155
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 64 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 115
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 156
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 580 F 580
F
Sbjct: 219 F 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+KCV N + I+ LL+ FT + V++ M +++ ++
Sbjct: 63 AYRELVLMKCV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 114
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 155
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 580 F 580
F
Sbjct: 218 F 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK-SAPQYTETAIDEIKLLKCVQET 143
+ Q+Y +G G S V C + A+KIM+ +A + + ++E++ +ET
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVRE-ATRRET 150
Query: 144 D--PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN--TYKLLLKSNNKGIPLYNVK 199
Q I+ L+D++ S + ++ + E F+ T K+ L +
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKE-------TR 203
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKENLPLLHMR 259
I++ LLEA+ +LH NI+H D+KPEN+LL N L+ ++ L+ L +
Sbjct: 204 SIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQ--IRLSDFGFSCHLEPGEKLRELC 260
Query: 260 NIPSFIQKQLNSNSKDRKMVKYQKYVE 286
P ++ ++ S D Y K V+
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVD 287
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV + E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+K V N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKVV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLY-------QMLVGIKHLHS-AGIIHRDLKPSNIVVKSD 162
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV + E+ G L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVL 224
Query: 580 FDPHTQ--NGWTRNEDHIG 596
F P T + W + + +G
Sbjct: 225 F-PGTDHIDQWNKVIEQLG 242
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 68 SKDYRVGGYHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP 124
S+ R ++ V IGD +RY ++ +G G V +D I R VA+K +
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 125 Q---YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEV 176
Q + + A E+ L+K V N + I+ LL+ FT + V+I M +++
Sbjct: 62 QNQTHAKRAYRELVLMKVV--------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 177 EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 114 NLSQVIQMELDHERMSYLLY-------QMLVGIKHLHS-AGIIHRDLKPSNIVVKSD 162
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 36/163 (22%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKI 153
LG G + V+ D +A+K I + +Y++ +EI L K ++ + I
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN--------I 81
Query: 154 VQLLDNFTISGVHGVHICMVLEVEGFNTYKLL------LKSNNKGIPLYNVKCIVKQLLE 207
VQ L +F+ +G + I M +V G + LL LK N + I Y KQ+LE
Sbjct: 82 VQYLGSFSENGF--IKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYT-----KQILE 133
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLK 250
L+YLH+ I+H DIK +NVL + TY+ VLK
Sbjct: 134 GLKYLHDN-QIVHRDIKGDNVL------------INTYSGVLK 163
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 543 TRQYRSIEVLLRS--GYDTSADIWSVACMAFELATGDYLF 580
T QY + E++ + GY +ADIWS+ C E+ATG F
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETDPQDPN 149
++ +LG G F V+ +K A K++++ + + E I EI++L +
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--------D 66
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV+LL + H + +++E ++ ++G+ ++ + +Q+LEAL
Sbjct: 67 HPYIVKLLGAY----YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
+LH+K IIH D+K NVL+ D
Sbjct: 123 NFLHSK-RIIHRDLKAGNVLMTLEGD 147
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ-YTETAIDEIKLL 137
V++GD +++Y K+G G TV+ D + VA++ M Q E I+EI ++
Sbjct: 14 VSVGD-PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKS-NNKGIPL 195
+ + ++PN IV LD++ + G + +V+E + G + ++ ++ ++G
Sbjct: 73 R-----ENKNPN---IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEG--- 117
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
+ + ++ L+ALE+LH+ +IH +IK +N+LLG
Sbjct: 118 -QIAAVCRECLQALEFLHSN-QVIHRNIKSDNILLG 151
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+K V N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKXV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY Q+L +++LH+ IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLY-------QMLXGIKHLHS-AGIIHRDLKPSNIVVKSD 162
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 33/156 (21%)
Query: 89 YFVIRKLGWGHFSTVWLC-----WDKIATRFVALKIMKSAPQY--TETAIDEIKLLKCVQ 141
Y + LG G F V L K+A +F++ +++K + + E I +KLL+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR--- 67
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLK----SNNKGIPLYN 197
I++L D T I MV+E G + +++ + ++G
Sbjct: 68 --------HPHIIKLYDVITTP----TDIVMVIEYAGGELFDYIVEKKRMTEDEG----- 110
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
+ +Q++ A+EY H + I+H D+KPEN+LL N
Sbjct: 111 -RRFFQQIICAIEYCH-RHKIVHRDLKPENLLLDDN 144
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 26/161 (16%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALK---IMKSAPQYTETAIDEIKLLKCVQETDPQD 147
V +K+G G+F + L + +VA+K I APQ E + K + T
Sbjct: 8 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL----EYRFYKQLSAT---- 59
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
E + Q+ G G + MVLE+ G + + L ++ L V I QL+
Sbjct: 60 ---EGVPQVY----YFGPXGKYNAMVLELLG-PSLEDLFDLCDRTFTLKTVLMIAIQLIT 111
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELAL 242
+EY+H K ++I+ D+KPEN L+G HI + L
Sbjct: 112 RMEYVHTK-SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGL 151
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 36/163 (22%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKI 153
LG G + V+ D +A+K I + +Y++ +EI L K ++ + I
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN--------I 67
Query: 154 VQLLDNFTISGVHGVHICMVLEVEGFNTYKLL------LKSNNKGIPLYNVKCIVKQLLE 207
VQ L +F+ +G + I M +V G + LL LK N + I Y KQ+LE
Sbjct: 68 VQYLGSFSENGF--IKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYT-----KQILE 119
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLK 250
L+YLH+ I+H DIK +NVL + TY+ VLK
Sbjct: 120 GLKYLHDN-QIVHRDIKGDNVL------------INTYSGVLK 149
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 543 TRQYRSIEVLLRS--GYDTSADIWSVACMAFELATGDYLF 580
T QY + E++ + GY +ADIWS+ C E+ATG F
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHF--SRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+K V N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKXV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L + IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHL--------HSAGIIHRDLKPSNIVVKSD 162
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA+KI+ + + + A++ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 72 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 116
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 117 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 176 LCGTPTYLAPEV 187
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 522 VKLADLGNACWRDKHFSRD--IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
+K+ D G A F + TR YR+ EV+L GY + DIWSV C+ E+ L
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 580 F 580
F
Sbjct: 225 F 225
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 76 YHPVNIGD---LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTET 129
++ V +GD +RY ++ +G G V +D + R VA+K + Q + +
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFT----ISGVHGVHICM-VLEVEGFNTYKL 184
A E+ L+K V N + I+ LL+ FT + V++ M +++ ++
Sbjct: 70 AYRELVLMKXV--------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 185 LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L LY + C +K L A IIH D+KP N+++ S+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSD 162
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 574 ATGDYLF 580
+ +F
Sbjct: 242 LSNRPIF 248
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 77 HPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAID 132
P ++G Y Q ++ +G G + V +D + VA+K K +P Y + +
Sbjct: 37 QPFDVGPRYTQ----LQYIGEGAYGMVSSAYDHVRKTRVAIK--KISPFEHQTYCQRTLR 90
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNK 191
EI++L + N I +L T+ + V+I ++E + + K SN+
Sbjct: 91 EIQILLRFRHE-----NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND- 144
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
++ + Q+L L+Y+H+ N++H D+KP N+L+ + D
Sbjct: 145 -----HICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLINTTCD 182
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATG 576
++K+AD G A + ++ +I T YR+ +VL+ S Y T+ DIWSV C+ E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 577 DYLF 580
LF
Sbjct: 198 TPLF 201
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYTETAIDEIKLLKCVQETD 144
++Y + K+G G + V+ + F KI K T I EI +LK ++ ++
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVK 203
IV+L D V +VL E + K LL G+ K +
Sbjct: 62 --------IVKLYD------VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
QLL + Y H++ ++H D+KP+N+L+
Sbjct: 108 QLLNGIAYCHDR-RVLHRDLKPQNLLI 133
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA+KI+ + + + A++ EI++LK
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 71 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 115
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 116 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 175 LCGTPTYLAPEV 186
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA+KI+ + + + A++ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 72 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 116
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 117 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 176 LCGTPTYLAPEV 187
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
+++KLG G F VW+ + +T+ VA+K +K + ++E L+K +Q
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQ--------H 66
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEAL 209
+K+V+L T I ++ E + LKS+ G + L + Q+ E +
Sbjct: 67 DKLVRLYAVVT----KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 210 EYLHNKCNIIHTDIKPENVLL 230
Y+ K N IH D++ NVL+
Sbjct: 123 AYIERK-NYIHRDLRAANVLV 142
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA+KI+ + + + A++ EI++LK
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 78 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 122
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 123 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 182 LCGTPTYLAPEV 193
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA+KI+ + + + A++ EI++LK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 72 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 116
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 117 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 176 LCGTPTYLAPEV 187
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Query: 574 ATGDYLF 580
+ +F
Sbjct: 222 LSNRPIF 228
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 82 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 131 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 162
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Query: 574 ATGDYLF 580
+ +F
Sbjct: 222 LSNRPIF 228
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 82 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 131 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 162
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 166
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Query: 574 ATGDYLF 580
+ +F
Sbjct: 222 LSNRPIF 228
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 82 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 131 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 162
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATG 576
++K+AD G A + ++ ++ T YR+ +VL+ S Y T+ DIWSV C+ E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 577 DYLF 580
LF
Sbjct: 198 TPLF 201
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYTETAIDEIKLLKCVQETD 144
++Y + K+G G + V+ + F KI K T I EI +LK ++ ++
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVK 203
IV+L D V +VL E + K LL G+ K +
Sbjct: 62 --------IVKLYD------VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
QLL + Y H++ ++H D+KP+N+L+
Sbjct: 108 QLLNGIAYCHDR-RVLHRDLKPQNLLI 133
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 164 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Query: 574 ATGDYLF 580
+ +F
Sbjct: 224 LSNRPIF 230
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 84 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 132
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 133 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 164
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 162 DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Query: 574 ATGDYLF 580
+ +F
Sbjct: 222 LSNRPIF 228
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 82 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 131 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 162
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 166
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 160 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
Query: 574 ATGDYLF 580
+ +F
Sbjct: 220 LSNRPIF 226
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 80 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 128
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 129 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 160
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 182 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 574 ATGDYLF 580
+ +F
Sbjct: 242 LSNRPIF 248
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 23/155 (14%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLK---SNNKGIPLYNVKC 200
N I ++ TI + V+ +V + G + YKLL SN+ ++
Sbjct: 102 -----NIIGINDIIRAPTIEQMKDVY--LVTHLMGADLYKLLKTQHLSND------HICY 148
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 149 FLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTXD 182
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 160 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
Query: 574 ATGDYLF 580
+ +F
Sbjct: 220 LSNRPIF 226
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 80 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 128
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 129 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 160
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 167 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Query: 574 ATGDYLF 580
+ +F
Sbjct: 227 LSNRPIF 233
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 87 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 135
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 136 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 167
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 168 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
Query: 574 ATGDYLF 580
+ +F
Sbjct: 228 LSNRPIF 234
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 88 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 136
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 137 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 168
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 159 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
Query: 574 ATGDYLF 580
+ +F
Sbjct: 219 LSNRPIF 225
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 79 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 127
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 128 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 159
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 182 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 574 ATGDYLF 580
+ +F
Sbjct: 242 LSNRPIF 248
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 102 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 150
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 151 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 182
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 166
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ 146
++Y +++KLG G + VW D+ VA+K + A Q + A + + + E
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-- 66
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
E IV LL+ V+ +V + + + ++ N P++ + +V QL+
Sbjct: 67 --GHENIVNLLNVLRADNDRDVY--LVFDYMETDLHAVI--RANILEPVHK-QYVVYQLI 119
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGS 232
+ ++YLH+ ++H D+KP N+LL +
Sbjct: 120 KVIKYLHSG-GLLHRDMKPSNILLNA 144
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA++ K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIR--KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 166
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 166
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 164 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Query: 574 ATGDYLF 580
+ +F
Sbjct: 224 LSNRPIF 230
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 84 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 132
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 133 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 164
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 164 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
Query: 574 ATGDYLF 580
+ +F
Sbjct: 224 LSNRPIF 230
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 84 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 132
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + +D
Sbjct: 133 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTSD 164
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 170 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
Query: 574 ATGDYLF 580
+ +F
Sbjct: 230 LSNRPIF 236
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 90 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 138
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 139 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 170
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 162 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
Query: 574 ATGDYLF 580
+ +F
Sbjct: 222 LSNRPIF 228
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 82 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 131 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 162
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
Query: 574 ATGDYLF 580
+ +F
Sbjct: 226 LSNRPIF 232
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 86 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 134
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 135 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 166
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 521 DVKLADLGNACWRDK------HFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFEL 573
D+K+ D G A D + TR YR+ E++L S GY S DIWSV C+ E+
Sbjct: 167 DLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
Query: 574 ATGDYLF 580
+ +F
Sbjct: 227 LSNRPIF 233
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQET 143
RY + +G G + V +D + VA+K K +P Y + + EIK+L +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK--KISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 144 DPQDPNREKIVQLLDNFTISGVHGVHICM-VLEVEGFNTYKLLLKSNNKGIPLYNVKCIV 202
N I ++ TI + V+I ++E + + K SN+ ++ +
Sbjct: 87 -----NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 135
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
Q+L L+Y+H+ N++H D+KP N+LL + D
Sbjct: 136 YQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCD 167
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELATG 576
++K+AD G A + ++ ++ T YR+ +VL+ S Y T+ DIWSV C+ E+ G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 577 DYLF 580
LF
Sbjct: 198 APLF 201
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIM--KSAPQYTETAIDEIKLLKCVQETD 144
++Y + K+G G + V+ + F KI K T I EI +LK ++ ++
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVK 203
IV+L D V +VL E + K LL G+ K +
Sbjct: 62 --------IVKLYD------VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
QLL + Y H++ ++H D+KP+N+L+
Sbjct: 108 QLLNGIAYCHDR-RVLHRDLKPQNLLI 133
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++++LG G F VW+ + +T+ VA+K +K + ++E L+K +Q
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQ--------H 67
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEAL 209
+K+V+L T I ++ E + LKS+ G + L + Q+ E +
Sbjct: 68 DKLVRLYAVVT----REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 210 EYLHNKCNIIHTDIKPENVLL 230
Y+ K N IH D++ NVL+
Sbjct: 124 AYIERK-NYIHRDLRAANVLV 143
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 520 IDVKLADLGNACW----RDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
+++K+AD G A +KH++ T Y S E+ RS + +D+WS+ CM + L
Sbjct: 149 MNIKIADFGLATQLKMPHEKHYTL-CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI 207
Query: 576 GDYLFDPHT 584
G FD T
Sbjct: 208 GRPPFDTDT 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAID---EIKLLKC 139
Y + + LG G V L +++ + VA++I+ + + + A++ EI++LK
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 140 VQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNV 198
+ N I+++ + F + +VLE+ EG + ++ NK +
Sbjct: 197 L--------NHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATC 241
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLH 257
K Q+L A++YLH IIH D+KPENVLL S D + ++ ++++L E +
Sbjct: 242 KLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 300
Query: 258 MRNIPSFIQKQL 269
+ P+++ ++
Sbjct: 301 LCGTPTYLAPEV 312
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 274 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EK 323
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 324 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 380 E-RMNYVHRDLRAANILVGEN 399
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNA---CWRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATGD 577
+K+ D G A + F+ +I T YR E+LL S Y TS DIWS+AC+ E+
Sbjct: 176 LKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 578 YLF 580
LF
Sbjct: 236 PLF 238
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQ---YTETAIDEIKLLKCVQETD 144
RY I KLG G + V+ D + VA+K ++ + TAI E+ LLK +Q +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
I++L I H +H+ Y N + + +K + Q
Sbjct: 95 --------IIEL--KSVIHHNHRLHLIFEYAENDLKKY----MDKNPDVSMRVIKSFLYQ 140
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
L+ + + H++ +H D+KP+N+LL
Sbjct: 141 LINGVNFCHSR-RCLHRDLKPQNLLL 165
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP-QD 147
Y + + LG G V L +++ + VA++I+ +A + L E + +
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N I+++ + F + +VLE+ EG + ++ NK + K Q+L
Sbjct: 211 LNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV--GNKRLKEATCKLYFYQML 263
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSN-NDHIFELALKTYNQVLKENLPLLHMRNIPSFI 265
A++YLH IIH D+KPENVLL S D + ++ ++++L E + + P+++
Sbjct: 264 LAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 322
Query: 266 QKQL 269
++
Sbjct: 323 APEV 326
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 134 IKLLK-CVQETDPQDPNRE-KIVQLLDNFTISGVHGV----HICMVLEVEGFNTYKLLLK 187
IK+LK ++ D ++ RE +I+ LDN I + GV + +V+E+ G L
Sbjct: 42 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLV 101
Query: 188 SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ IP+ NV ++ Q+ ++YL K N +H D+ NVLL
Sbjct: 102 GKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLL 143
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 168 VHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPEN 227
V ICM L + + + + IP + I +++ALE+LH+K ++IH D+KP N
Sbjct: 125 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 228 VLL 230
VL+
Sbjct: 185 VLI 187
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 77 HPVNI--GDLYEQRYFVIRKLGWGHFSTVWLCWDKIATR-FVALKIMKSAPQYTETAIDE 133
PV + G +Y+ Y ++ +LG G F V C +K R FVA I P T +E
Sbjct: 40 QPVEVKQGSVYDY-YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNE 98
Query: 134 IKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGI 193
I ++ + + K++ L D F MVL +E + +L + +
Sbjct: 99 ISIMNQL--------HHPKLINLHDAFEDK------YEMVLILEFLSGGELFDRIAAEDY 144
Query: 194 PLYNVKCI--VKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ + I ++Q E L+++H +I+H DIKPEN++
Sbjct: 145 KMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIM 181
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 168 VHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPEN 227
V ICM L + + + + IP + I +++ALE+LH+K ++IH D+KP N
Sbjct: 81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 228 VLLGS 232
VL+ +
Sbjct: 141 VLINA 145
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCV 140
I D YE R+ + G G + V +DK+ R VA+K + + E ID ++L+ +
Sbjct: 51 IPDRYEIRHLI----GTGSYGHVCEAYDKLEKRVVAIKKIL---RVFEDLIDCKRILREI 103
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHGV-HICMVLEVEGFNTYKLLLKSNNKGIPLY--- 196
+ N + +V++LD V + +VLE+ + +K L ++ P+Y
Sbjct: 104 AILNRL--NHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRT-----PVYLTE 155
Query: 197 -NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
++K ++ LL ++Y+H+ I+H D+KP N L+
Sbjct: 156 LHIKTLLYNLLVGVKYVHS-AGILHRDLKPANCLV 189
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 535 KHFSRDIQTRQYRSIE-VLLRSGYDTSADIWSVACMAFEL 573
+ + + TR YR+ E +LL+ Y + D+WS+ C+ EL
Sbjct: 238 RQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETD 144
E + +I +LG G F V+ +K + A K++ + + + E + EI +L
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN IV+LLD F ++ +++E ++ + + ++ + KQ
Sbjct: 94 ---PN---IVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
L+AL YLH+ IIH D+K N+L + D
Sbjct: 144 TLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETD 144
E + +I +LG G F V+ +K + A K++ + + + E + EI +L
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN IV+LLD F ++ +++E ++ + + ++ + KQ
Sbjct: 94 ---PN---IVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
L+AL YLH+ IIH D+K N+L + D
Sbjct: 144 TLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETD 144
E + +I +LG G F V+ +K + A K++ + + + E + EI +L
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN IV+LLD F ++ +++E ++ + + ++ + KQ
Sbjct: 94 ---PN---IVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
L+AL YLH+ IIH D+K N+L + D
Sbjct: 144 TLDALNYLHDN-KIIHRDLKAGNILFTLDGD 173
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETA---IDEIKL 136
++GD YE +I +G G + V ++ + VA+K + +A A + E+K+
Sbjct: 51 DVGDEYE----IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 106
Query: 137 LKCVQETDPQDPNREKIVQLLDNFTISGVHGVH--ICMVLEVEGFNTYKLLLKSNNKGIP 194
LK + + I+ + D + +G + +VL++ + ++++ +++ +
Sbjct: 107 LKHFKH--------DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLT 156
Query: 195 LYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L +V+ + QLL L+Y+H+ +IH D+KP N+L+ N
Sbjct: 157 LEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNEN 194
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 521 DVKLADLGNA---C---WRDKHFSRD-IQTRQYRSIEVLLR-SGYDTSADIWSVACMAFE 572
++K+ D G A C ++F + + TR YR+ E++L Y + D+WSV C+ E
Sbjct: 196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 255
Query: 573 LATGDYLF 580
+ LF
Sbjct: 256 MLARRQLF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 127
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 128 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 182
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 183 LHS-INIAHRDVKPENLLYTS 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELAL 242
I++Q+ AL YLHN+ I H DIKPEN L +N FE+ L
Sbjct: 173 IMRQIFSALHYLHNQ-GICHRDIKPENFLFSTNKS--FEIKL 211
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 121
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 122 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 176
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 177 LHS-INIAHRDVKPENLLYTS 196
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 77
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 78 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 133 LHS-INIAHRDVKPENLLYTS 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETA---IDEIKL 136
++GD YE +I +G G + V ++ + VA+K + +A A + E+K+
Sbjct: 52 DVGDEYE----IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI 107
Query: 137 LKCVQETDPQDPNREKIVQLLDNFTISGVHGVH--ICMVLEVEGFNTYKLLLKSNNKGIP 194
LK + + I+ + D + +G + +VL++ + ++++ +++ +
Sbjct: 108 LKHFKH--------DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLT 157
Query: 195 LYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
L +V+ + QLL L+Y+H+ +IH D+KP N+L+ N
Sbjct: 158 LEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNEN 195
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 521 DVKLADLGNA---C---WRDKHFSRD-IQTRQYRSIEVLLR-SGYDTSADIWSVACMAFE 572
++K+ D G A C ++F + + TR YR+ E++L Y + D+WSV C+ E
Sbjct: 197 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 256
Query: 573 LATGDYLF 580
+ LF
Sbjct: 257 MLARRQLF 264
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EK 240
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 241 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 297 E-RMNYVHRDLRAANILVGEN 316
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EK 240
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 241 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 297 E-RMNYVHRDLRAANILVGEN 316
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 77
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 78 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 133 LHS-INIAHRDVKPENLLYTS 152
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 180 NTYKLLLKSNNKGIPLYNVKCI--------VKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
N + LL+ + G + C+ + Q LE LEYLH++ I+H D+K +NVLL
Sbjct: 142 NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR-RILHGDVKADNVLLS 200
Query: 232 SNNDH 236
S+ H
Sbjct: 201 SDGSH 205
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 509 DNVNPAKDICHIDVKLADLGNA-CWRDKHFSRDIQTRQY-------RSIEVLLRSGYDTS 560
DNV + D H L D G+A C + +D+ T Y + EV+L D
Sbjct: 195 DNVLLSSDGSH--AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAK 252
Query: 561 ADIWSVACMAFELATGDYLFDPHTQ 585
D+WS CM + G + P TQ
Sbjct: 253 VDVWSSCCMMLHMLNGCH---PWTQ 274
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAIDEIKL 136
+ E Y + +LG G F+ V C K A +F+ + + S+ + E E+ +
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 137 LKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPL 195
L+ ++ PN I+ L D F + + ++LE V G + L + + +
Sbjct: 62 LREIRH-----PN---IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTE 107
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+KQ+L+ + YLH+K I H D+KPEN++L N
Sbjct: 108 DEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKN 145
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 77
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 78 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 133 LHS-INIAHRDVKPENLLYTS 152
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 75
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 76 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 131 LHS-INIAHRDVKPENLLYTS 150
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 522 VKLADLGNACWRDKH--FSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+KL D G A H + T Y + EVL YD S D+WS+ + + L G
Sbjct: 157 LKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 91 VIRKLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
+I++LG G F VW+ W+ VA+K +K E+ ++E +++K ++
Sbjct: 13 LIKRLGNGQFGEVWMGTWN--GNTKVAIKTLKPGTMSPESFLEEAQIMKKLK-------- 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
+K+VQL + + ++I +G + L + + L N+ + Q+ +
Sbjct: 63 HDKLVQL---YAVVSEEPIYIVTEYMNKG-SLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 210 EYLHNKCNIIHTDIKPENVLLGSN 233
Y+ + N IH D++ N+L+G+
Sbjct: 119 AYIE-RMNYIHRDLRSANILVGNG 141
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 180 NTYKLLLKSNNKGIPLYNVKCI--------VKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
N + LL+ + G + C+ + Q LE LEYLH++ I+H D+K +NVLL
Sbjct: 161 NIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR-RILHGDVKADNVLLS 219
Query: 232 SNNDH 236
S+ H
Sbjct: 220 SDGSH 224
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Query: 509 DNVNPAKDICHIDVKLADLGNA-CWRDKHFSRDIQTRQY-------RSIEVLLRSGYDTS 560
DNV + D H L D G+A C + + + T Y + EV+L D
Sbjct: 214 DNVLLSSDGSH--AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAK 271
Query: 561 ADIWSVACMAFELATGDYLFDPHTQ 585
D+WS CM + G + P TQ
Sbjct: 272 VDVWSSCCMMLHMLNGCH---PWTQ 293
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 75
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 76 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 131 LHS-INIAHRDVKPENLLYTS 150
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 81
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 82 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 136
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 137 LHS-INIAHRDVKPENLLYTS 156
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 83
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 84 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 138
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 139 LHS-INIAHRDVKPENLLYTS 158
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH--------EK 240
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 241 LVQL---YAVVSEEPIYIVGEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 297 E-RMNYVHRDLRAANILVGEN 316
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 91
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 92 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 146
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 147 LHS-INIAHRDVKPENLLYTS 166
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 25/149 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y +++ LG G F V L + + VALKI+ K + ++D Q
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 60
Query: 149 NREKI--VQLLDNFTISGVHGV-----HICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+I ++LL + I ++ V I MV+E G + +++ + + +
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRF 118
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+Q++ A+EY H + I+H D+KPEN+LL
Sbjct: 119 FQQIISAVEYCH-RHKIVHRDLKPENLLL 146
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 76
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 77 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 131
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 132 LHS-INIAHRDVKPENLLYTS 151
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 513 PAKDICHIDVK--------------LADLGNACWRDKHFSRD------IQTRQYRSIEVL 552
P+ ++CH D+K L D G+A K S I +R YR+ E++
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSA----KKLSPSEPNVAYICSRYYRAPELI 203
Query: 553 L-RSGYDTSADIWSVACMAFELATGDYLF 580
Y T+ DIWSV C+ E+ G+ +F
Sbjct: 204 FGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
R+ V R G G F TV L +K VA+K + P++ + ++ L +
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH----- 78
Query: 148 PNREKIVQLLDNFTISG---VHGVHICMVLEVEGFNTYKLLLKSNNKGI--PLYNVKCIV 202
PN IVQL F G +++ +V+E ++ + + P +K +
Sbjct: 79 PN---IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 203 KQLLEALEYLH-NKCNIIHTDIKPENVLL 230
QL+ ++ LH N+ H DIKP NVL+
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAIDEIKL 136
+ E Y + +LG G F+ V C K A +F+ + + S+ + E E+ +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 137 LKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPL 195
L+ ++ PN I+ L D F + + ++LE V G + L + + +
Sbjct: 83 LREIRH-----PN---IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTE 128
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+KQ+L+ + YLH+K I H D+KPEN++L
Sbjct: 129 DEATQFLKQILDGVHYLHSK-RIAHFDLKPENIML 162
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 25/149 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y +++ LG G F V L + + VALKI+ K + ++D Q
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 59
Query: 149 NREKI--VQLLDNFTISGVHGV-----HICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+I ++LL + I ++ V I MV+E G + +++ + + +
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRF 117
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+Q++ A+EY H + I+H D+KPEN+LL
Sbjct: 118 FQQIISAVEYCH-RHKIVHRDLKPENLLL 145
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK+++ P+ A E++L Q P+ +IV
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPK----ARREVEL----HWRASQCPHIVRIV 82
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ +E + +L + ++G + I+K + EA++Y
Sbjct: 83 DVYEN-----LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 137
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 138 LHS-INIAHRDVKPENLLYTS 157
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + D G +V+E T + ++ + P ++ ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+L+ + N
Sbjct: 127 QALNFSHQN-GIIHRDVKPANILISATN 153
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 165 AIADSGNSVXQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I M +G L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVMEYMSKG-CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 -ERMNYVHRDLRAANILVGEN 150
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 70 DYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTET 129
DY + G + + D +E V +LG G S V+ C K + ALK++K
Sbjct: 40 DYWIDGSNRDALSDFFE----VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV 95
Query: 130 AIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKS 188
+ LL+ PN K+ ++ + T I +VLE V G + +++
Sbjct: 96 RTEIGVLLRL------SHPNIIKLKEIFETPT-------EISLVLELVTGGELFDRIVEK 142
Query: 189 NNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+ VKQ+LEA+ YLH I+H D+KPEN+L +
Sbjct: 143 GYYS--ERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYAT 183
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + D G +V+E T + ++ + P ++ ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+++ + N
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMISATN 153
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 165 AIADSGNSVTQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 86
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----CLLKYIRK-IGSFDETCTRFYTAE 140
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 141 IVSALEYLHGK-GIIHRDLKPENILL 165
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCV------ 140
++Y + + LG G F V +D + + ALK + P+Y +D +K+L V
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLV 66
Query: 141 ---------QETDPQDPNREKIVQLLDN--------FTISGVHGVHICMVLEVEGFNTYK 183
+ PQ P+ + +N ++ ++ +++E +K
Sbjct: 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHK 126
Query: 184 LL--LKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+L + + IP+ + + QL A+ ++H+ I H DIKP+N+L+ S ++
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDN 179
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 517 ICHIDVK--------------LADLGNA--CWRDKHFSRDIQTRQYRSIEVLLRSG-YDT 559
ICH D+K L D G+A + I +R YR+ E++L + Y
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTP 221
Query: 560 SADIWSVACMAFELATGDYLFDPHT 584
S D+WS+ C+ EL G LF T
Sbjct: 222 SIDLWSIGCVFGELILGKPLFSGET 246
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + D G +V+E T + ++ + P ++ ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+++ + N
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMISATN 153
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 165 AIADSGNSVTQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 25/149 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y +++ LG G F V L + + VALKI+ K + ++D Q
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 54
Query: 149 NREKI--VQLLDNFTISGVHGV-----HICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+I ++LL + I ++ V I MV+E G + +++ + + +
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRF 112
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+Q++ A+EY H + I+H D+KPEN+LL
Sbjct: 113 FQQIISAVEYCH-RHKIVHRDLKPENLLL 140
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 25/149 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y +++ LG G F V L + + VALKI+ K + ++D Q
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 50
Query: 149 NREKI--VQLLDNFTISGVHGV-----HICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
+I ++LL + I ++ V I MV+E G + +++ + + +
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRF 108
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+Q++ A+EY H + I+H D+KPEN+LL
Sbjct: 109 FQQIISAVEYCH-RHKIVHRDLKPENLLL 136
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I + +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVIEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + D G +V+E T + ++ + P ++ ++
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+++ + N
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMISATN 153
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 165 AIADSGNSVTQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I + +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVIEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKIR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 168 VHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPEN 227
V IC L + + + + IP + I +++ALE+LH+K ++IH D+KP N
Sbjct: 108 VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 167
Query: 228 VLLGS 232
VL+ +
Sbjct: 168 VLINA 172
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 192 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRH--------EK 241
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 242 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 298 E-RMNYVHRDLRAANILVGEN 317
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAIDEIKLLK 138
E Y + +LG G F+ V C K A +F+ + + S+ + E E+ +L+
Sbjct: 11 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYN 197
++ PN I+ L D F + + ++LE V G + L + + +
Sbjct: 71 EIRH-----PN---IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDE 116
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+KQ+L+ + YLH+K I H D+KPEN++L N
Sbjct: 117 ATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKN 152
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 18 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 67
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 68 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 124 E-RMNYVHRDLRAANILVGEN 143
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 134 IKLLK-CVQETDPQDPNRE-KIVQLLDNFTISGVHGV----HICMVLEVEGFNTYKLLLK 187
IK+LK ++ D ++ RE +I+ LDN I + GV + +V+E+ G L
Sbjct: 368 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLV 427
Query: 188 SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ IP+ NV ++ Q+ ++YL K N +H ++ NVLL
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLL 469
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 25/194 (12%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDK-IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
E Y + +LG G F+ V C +K + A I K + + + C +E +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV-------CREEIE 63
Query: 145 PQDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYN 197
RE I++ + + I +H V+ + ++LE V G + L + + +
Sbjct: 64 -----REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEE 116
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPL 255
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 117 ATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 256 LHMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-IATRFVALKIMKSAPQYTETAIDEIKLL 137
+N GD+ +Y V + G ++L D+ + R V LK + + A+ +
Sbjct: 72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ 131
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHIC-MVLEVEGFNTYKLLLKSNNKGIPLY 196
+ P IVQ+ + + HG + +V+E G + K +S + +P+
Sbjct: 132 FLAEVVHP------SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQKLPVA 182
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ ++L AL YLH+ +++ D+KPEN++L
Sbjct: 183 EAIAYLLEILPALSYLHS-IGLVYNDLKPENIML 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 522 VKLADLGNA---CWRDKHFSRDIQTRQYRSIEVLLRS-GYDTSADIWSVACMAFELATGD 577
VKL D G A + + ++ TR YR+ E+L+ Y + D+W++ C+ E+ G+
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 578 YLF 580
LF
Sbjct: 223 PLF 225
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 35/152 (23%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSA---PQYTETAIDEIKLLKCVQETDPQDPNRE 151
+G G + V C +K R VA+K + + A+ EIKLLK ++ E
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--------HE 84
Query: 152 KIVQLLDNFTISGVHGVHIC-------MVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIV 202
+V LL+ +C +V E F + +L L+ G+ V+ +
Sbjct: 85 NLVNLLE-----------VCKKKKRWYLVFE---FVDHTILDDLELFPNGLDYQVVQKYL 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
Q++ + + H+ NIIH DIKPEN+L+ +
Sbjct: 131 FQIINGIGFCHSH-NIIHRDIKPENILVSQSG 161
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 180 NTYKLLLKSNNKGIPLYNVKCI--------VKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
N + LL+ + G + + C+ + Q LE LEYLH + I+H D+K +NVLL
Sbjct: 126 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLS 184
Query: 232 SNND 235
S+
Sbjct: 185 SDGS 188
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
+KLG G F VW+ T+ VA+K MK E + E ++K +Q +K
Sbjct: 194 KKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQ--------HDK 244
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEALEY 211
+V+L T ++ ++ E + LKS+ PL + Q+ E + +
Sbjct: 245 LVKLHAVVTKEPIY-----IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 212 LHNKCNIIHTDIKPENVLLGSN 233
+ + N IH D++ N+L+ ++
Sbjct: 300 IEQR-NYIHRDLRAANILVSAS 320
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 180 NTYKLLLKSNNKGIPLYNVKCI--------VKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
N + LL+ + G + + C+ + Q LE LEYLH + I+H D+K +NVLL
Sbjct: 140 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLS 198
Query: 232 SNND 235
S+
Sbjct: 199 SDGS 202
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y + +LG G FS V C K T+ A KI+ + K + D Q
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINT---------------KKLSARDHQKL 77
Query: 149 NRE-KIVQLLDNFTISGVH------GVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
RE +I +LL + I +H G H + V G ++ ++ +
Sbjct: 78 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHC 135
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+ Q+LE++ ++H +I+H D+KPEN+LL S
Sbjct: 136 IHQILESVNHIHQH-DIVHRDLKPENLLLAS 165
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKI---MKSAPQYTETAIDEIKLLKCVQETDP 145
Y V R++G G F ++ + + + VA+K APQ DE + K +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR----DEYRTYKLLAGCTG 66
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+ N G G+H +V+++ G + + LL + + V KQ+
Sbjct: 67 -----------IPNVYYFGQEGLHNVLVIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQM 114
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELALKTY--NQVLKENLPLLH 257
L ++ +H K ++++ DIKP+N L+G N ++ + + + + V K+++P
Sbjct: 115 LARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 173
Query: 258 MRNI 261
+N+
Sbjct: 174 KKNL 177
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 521 DVKLADLGNA--CWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+VKL D G A D+ F+++ + T Y S E + R Y+ +DIWS+ C+ +EL
Sbjct: 154 NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-- 211
Query: 578 YLFDPHT 584
L P T
Sbjct: 212 -LMPPFT 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 180 NTYKLLLKSNNKGIPLYNVKCI--------VKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
N + LL+ + G + + C+ + Q LE LEYLH + I+H D+K +NVLL
Sbjct: 142 NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLS 200
Query: 232 SNND 235
S+
Sbjct: 201 SDGS 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 84
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + D G +V+E T + ++ + P ++ ++
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 143
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+++ + N
Sbjct: 144 QALNFSHQN-GIIHRDVKPANIMISATN 170
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 182 AIADSGNSVTQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
+KLG G F VW+ T+ VA+K MK E + E ++K +Q +K
Sbjct: 188 KKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQ--------HDK 238
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEALEY 211
+V+L T ++ ++ E + LKS+ PL + Q+ E + +
Sbjct: 239 LVKLHAVVTKEPIY-----IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 212 LHNKCNIIHTDIKPENVLLGSN 233
+ + N IH D++ N+L+ ++
Sbjct: 294 IEQR-NYIHRDLRAANILVSAS 314
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E+ + V+ KLG G + +V+ K + VA+K + E+D
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK-------------------QVPVESDL 68
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLEVEGFNTYKLLLKSNNKGIPLYNVK 199
Q+ +E I+Q D+ + +G + + +V+E G + +++ NK + +
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA 128
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
I++ L+ LEYLH IH DIK N+LL +
Sbjct: 129 TILQSTLKGLEYLHF-MRKIHRDIKAGNILLNTEG 162
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 522 VKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
KLAD G A ++ I T + + EV+ GY+ ADIWS+ A E+A G
Sbjct: 164 AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +KQ+L + YLH+ I H D+KPEN++L
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIML 147
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKI---MKSAPQYTETAIDEIKLLKCVQETDP 145
Y V R++G G F ++ + + + VA+K APQ DE + K +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR----DEYRTYKLLAGCTG 67
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+ N G G+H +V+++ G + + LL + + V KQ+
Sbjct: 68 -----------IPNVYYFGQEGLHNVLVIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQM 115
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNND------HIFELALKTY--NQVLKENLPLLH 257
L ++ +H K ++++ DIKP+N L+G N ++ + + + + V K+++P
Sbjct: 116 LARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 174
Query: 258 MRNI 261
+N+
Sbjct: 175 KKNL 178
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 86
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 140
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 141 IVSALEYLHGK-GIIHRDLKPENILL 165
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 128 ETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLK 187
E EI +LK + PN K+V++LD+ H+ MV E+ N ++
Sbjct: 81 EQVYQEIAILKKLDH-----PNVVKLVEVLDDPNED-----HLYMVFEL--VNQGPVMEV 128
Query: 188 SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQ 247
K + + + L++ +EYLH + IIH DIKP N+L+G + HI N+
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDG-HIKIADFGVSNE 186
Query: 248 VLKENLPLLHMRNIPSFIQKQLNSNSKDRKM 278
+ L + P+F+ + S S+ RK+
Sbjct: 187 FKGSDALLSNTVGTPAFMAPE--SLSETRKI 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLL- 137
+G+L + + I +LG G+ V+ K + +A K+ ++ P I E+++L
Sbjct: 62 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 138 KCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
+C N IV F G + ICM ++G + ++L K+ IP
Sbjct: 122 EC---------NSPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQI 167
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ + +++ L YL K I+H D+KP N+L+ S +
Sbjct: 168 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 205
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 205 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
Query: 580 FDP 582
P
Sbjct: 265 IPP 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++R LG G F V+L +K +ALK++ + E +++ +E + Q R
Sbjct: 18 IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR-----REIEIQSHLR 72
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+ + N+ +++ + G YK L K +++L +AL
Sbjct: 73 HPNILRMYNY-FHDRKRIYLMLEFAPRG-ELYKELQKHGR--FDEQRSATFMEELADALH 128
Query: 211 YLHNKCNIIHTDIKPENVLLGSNND 235
Y H + +IH DIKPEN+L+G +
Sbjct: 129 YCHER-KVIHRDIKPENLLMGYKGE 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 172 MVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLG 231
MV+E ++L K P+ QL++ LEYLH++ I+H DIKP N+LL
Sbjct: 85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLT 143
Query: 232 SNN 234
+
Sbjct: 144 TGG 146
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 16 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 65
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 66 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 122 E-RMNYVHRDLRAANILVGEN 141
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 87
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 141
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 142 IVSALEYLHGK-GIIHRDLKPENILL 166
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 63
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 117
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 118 IVSALEYLHGK-GIIHRDLKPENILL 142
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 50 SDPESDQEKMEDSNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDK 109
S P + ++ + ++Y H V G+ + Y ++RKLG G +S V+ +
Sbjct: 2 SGPVPSRARVYTDVNTHRPREYWDYASHVVEWGN--QDDYQLVRKLGRGKYSEVFEAINI 59
Query: 110 IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVH 169
V +KI+K P EIK+L+ ++ PN I+ L D +
Sbjct: 60 TNNEKVVVKILK--PVKKNKIKREIKILENLR----GGPN---IITLAD--IVKDPVSRT 108
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+V E +K L ++ + Y+++ + ++L+AL+Y H+ I+H D+KP NV+
Sbjct: 109 PALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVM 163
Query: 230 L 230
+
Sbjct: 164 I 164
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 94 KLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAIDEIKLLKCVQETDPQ 146
+LG G F+ V C +K A +F+ + KS+ + E E+ +LK +Q
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---- 73
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
PN + ++ +N T + ++LE V G + L + + + +KQ+
Sbjct: 74 -PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNN 234
L + YLH+ I H D+KPEN++L N
Sbjct: 124 LNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 62
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 116
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 117 IVSALEYLHGK-GIIHRDLKPENILL 141
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 94 KLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAIDEIKLLKCVQETDPQ 146
+LG G F+ V C +K A +F+ + KS+ + E E+ +LK +Q
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH---- 73
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
PN + ++ +N T + ++LE V G + L + + + +KQ+
Sbjct: 74 -PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 206 LEALEYLHNKCNIIHTDIKPENVLLGSNN 234
L + YLH+ I H D+KPEN++L N
Sbjct: 124 LNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G V ++K ALK ++ P+ A E++L Q P+ +IV
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPK----ARREVEL----HWRASQCPHIVRIV 121
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEALEY 211
+ +N ++ C+++ E + +L + ++G + I K + EA++Y
Sbjct: 122 DVYEN-----LYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQY 176
Query: 212 LHNKCNIIHTDIKPENVLLGS 232
LH+ NI H D+KPEN+L S
Sbjct: 177 LHS-INIAHRDVKPENLLYTS 196
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 64
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 118
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 119 IVSALEYLHGK-GIIHRDLKPENILL 143
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNAC--WRDKHFSRDI-QTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+DVK+ D G A D +D+ T Y + EVL + G+ DIWS+ C+ + L G
Sbjct: 163 MDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
Query: 577 DYLFD 581
F+
Sbjct: 223 KPPFE 227
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA----PQYTETAIDEIKLLKCVQE 142
+RY R LG G F+ + D A K++ + P E EI + K
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS--- 82
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVH-----ICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
LDN + G HG + +VLE+ + L L K +
Sbjct: 83 --------------LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPE 127
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ ++Q ++ ++YLHN +IH D+K N+ L + D
Sbjct: 128 ARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD 164
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 143 EIVSALEYLHGK-GIIHRDLKPENILL 168
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNAC--WRDKHFSRDI-QTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+DVK+ D G A D +D+ T Y + EVL + G+ DIWS+ C+ + L G
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 577 DYLFD 581
F+
Sbjct: 239 KPPFE 243
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA----PQYTETAIDEIKLLKCVQE 142
+RY R LG G F+ + D A K++ + P E EI + K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS--- 98
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVH-----ICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
LDN + G HG + +VLE+ + L L K +
Sbjct: 99 --------------LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPE 143
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ ++Q ++ ++YLHN +IH D+K N+ L + D
Sbjct: 144 ARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD 180
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 141 EIVSALEYLHGK-GIIHRDLKPENILL 166
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 145 EIVSALEYLHGK-GIIHRDLKPENILL 170
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 84
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 138
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 139 IVSALEYLHGK-GIIHRDLKPENILL 163
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG G FSTV L + +R A+KI++ I E K+ +E D ++
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEK-----RHIIKENKVPYVTRERD--------VM 61
Query: 155 QLLDN-------FTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI---VKQ 204
LD+ FT ++ + G LLK K I ++ C +
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG-----ELLKYIRK-IGSFDETCTRFYTAE 115
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ ALEYLH K IIH D+KPEN+LL
Sbjct: 116 IVSALEYLHGK-GIIHRDLKPENILL 140
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 7 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 63 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 108
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 150
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 72 RVGGYHPVNIGDLY-----EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK-SAPQ 125
R G ++ +L+ E+ + +R++G G F V+ D + VA+K M S Q
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 93
Query: 126 YTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLL 185
E D IK ++ +Q+ + PN +Q + H ++ + L
Sbjct: 94 SNEKWQDIIKEVRFLQKL--RHPN---TIQYRGCYLRE-----HTAWLVMEYCLGSASDL 143
Query: 186 LKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
L+ + K + + + L+ L YLH+ N+IH D+K N+LL
Sbjct: 144 LEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILL 187
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 14 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 63
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 64 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 120 E-RMNYVHRDLRAANILVGEN 139
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 7 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 63 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 108
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 109 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 150
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAIDEIKLLK------CV 140
RY ++ LG G V+ D + VA+K I+ + PQ + A+ EIK+++ V
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 141 QETDPQDPNREKIVQLLDNFT-ISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVK 199
+ + P+ ++ + + T ++ V+ V M ++ LL+ + +
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH--------AR 123
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ QLL L+Y+H+ N++H D+KP N+ + + +
Sbjct: 124 LFMYQLLRGLKYIHS-ANVLHRDLKPANLFINTED 157
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 580 FDP 582
P
Sbjct: 203 IPP 205
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
I +LG G+ V+ K + +A K+ ++ P I E+++L + N
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------HECN 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV F G + ICM ++G + ++L K+ IP + + +++ L
Sbjct: 63 SPYIVGFYGAFYSDG--EISICME-HMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
YL K I+H D+KP N+L+ S +
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE 143
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 137 EIVSALEYLHGK-GIIHRDLKPENILL 162
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y + E L + Y +DIWS+ ELA G Y
Sbjct: 153 EIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 580 FDP 582
P
Sbjct: 213 IPP 215
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLK 138
+G+L + + I +LG G+ V + + +A K+ ++ P I E+++L
Sbjct: 10 VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL- 68
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+ N IV F G + ICM ++G + ++L ++ K IP +
Sbjct: 69 -------HECNSPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKEA--KRIPEEIL 116
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ +L L YL K I+H D+KP N+L+ S +
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIM-KSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
+ LG G FS C K + + A+KI+ K T+ I +KL + PN
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-------GHPN-- 67
Query: 152 KIVQLLDNFTISGVHGVHICMVLEV-EGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
IV+L + F +H +V+E+ G ++ + K K I+++L+ A+
Sbjct: 68 -IVKLHEVFHDQ----LHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVS 120
Query: 211 YLHNKCNIIHTDIKPENVLLGSNNDHI 237
++H+ ++H D+KPEN+L ND++
Sbjct: 121 HMHD-VGVVHRDLKPENLLFTDENDNL 146
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 520 IDVKLADLGNACWR---DKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+++K+ D G A + ++ T Y + E+L ++GYD S D+WS+ + + + +G
Sbjct: 146 LEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
Query: 577 DYLFDPH 583
F H
Sbjct: 206 QVPFQSH 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 122 EIVSALEYLHGK-GIIHRDLKPENILL 147
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVCEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ ALEYLH K IIH D+KPEN+LL
Sbjct: 137 EIVSALEYLHGK-GIIHRDLKPENILL 162
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 541 IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+ T QY S E+L S+D+W++ C+ ++L G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 517 ICHIDVK--------------LADLGNA--CWRDKHFSRDIQTRQYRSIEVLL-RSGYDT 559
ICH D+K L D G+A + I +R YR+ E++ + Y T
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTT 221
Query: 560 SADIWSVACMAFELATGDYLF 580
+ DIWS C+ EL G LF
Sbjct: 222 NIDIWSTGCVMAELMQGQPLF 242
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ +K + QLL +L Y+H+ I H DIKP+N+LL
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLL 174
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 170 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 580 FDP 582
P
Sbjct: 230 IPP 232
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLK 138
+G+L + + I +LG G+ V+ K + +A K+ ++ P I E+++L
Sbjct: 27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 85
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+ N IV F G + ICM ++G + ++L K+ IP +
Sbjct: 86 -------HECNSPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQIL 133
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ +++ L YL K I+H D+KP N+L+ S +
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 60
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 115
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 116 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 151
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 15 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 64
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + + I +G + L K + L + + Q+ + Y+
Sbjct: 65 LVQL---YAVVSEEPIXIVTEYMSKG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 121 E-RMNYVHRDLRAANILVGEN 140
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 580 FDP 582
P
Sbjct: 203 IPP 205
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
I +LG G+ V+ K + +A K+ ++ P I E+++L + N
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------HECN 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV F G + ICM ++G + ++L K+ IP + + +++ L
Sbjct: 63 SPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
YL K I+H D+KP N+L+ S +
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE 143
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA---PQYTETAIDEIKLLKCVQETDP 145
Y +++ +G G+F+ V L + R VA+KI+ P + E++++K +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 70
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN K+ ++++ + +++E G + L+ + + +Q
Sbjct: 71 --PNIVKLFEVIETEKT-------LYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQ 119
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ A++Y H K I+H D+K EN+LL
Sbjct: 120 IVSAVQYCHQK-RIVHRDLKAENLLL 144
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 580 FDP 582
P
Sbjct: 203 IPP 205
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
I +LG G+ V+ K + +A K+ ++ P I E+++L + N
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------HECN 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV F G + ICM ++G + ++L K+ IP + + +++ L
Sbjct: 63 SPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
YL K I+H D+KP N+L+ S +
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE 143
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY ++ +G G+F L DK+ VA+K ++ AIDE + + +
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-----AAIDENVQREIINHRSLRH 75
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
PN + +++ T H+ +++E G Y+ + N + +QLL
Sbjct: 76 PNIVRFKEVILTPT-------HLAIIMEYASGGELYERI--CNAGRFSEDEARFFFQQLL 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H+ I H D+K EN LL
Sbjct: 127 SGVSYCHSM-QICHRDLKLENTLL 149
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 517 ICHIDVKLADL---GNACWR----DKHFSRD----------IQTRQYRSIEVLLRSGYDT 559
ICH D+KL + G+ R D +S+ + T Y + EVLLR YD
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG 196
Query: 560 S-ADIWSVACMAFELATGDYLFD 581
AD+WS + + G Y F+
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 521 DVKLADLGNA--CWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+VKL D G A D F++ + T Y S E + R Y+ +DIWS+ C+ +EL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-- 211
Query: 578 YLFDPHT 584
L P T
Sbjct: 212 -LMPPFT 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+DVK+ D G A + R T Y + EVL + G+ DIWS+ C+ + L G
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 577 DYLFD 581
F+
Sbjct: 239 KPPFE 243
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA----PQYTETAIDEIKLLKCVQE 142
+RY R LG G F+ + D A K++ + P E EI + K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS--- 98
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVH-----ICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
LDN + G HG + +VLE+ + L L K +
Sbjct: 99 --------------LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPE 143
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ ++Q ++ ++YLHN +IH D+K N+ L + D
Sbjct: 144 ARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD 180
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+DVK+ D G A + R T Y + EVL + G+ DIWS+ C+ + L G
Sbjct: 179 MDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 577 DYLFD 581
F+
Sbjct: 239 KPPFE 243
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA----PQYTETAIDEIKLLKCVQE 142
+RY R LG G F+ + D A K++ + P E EI + K
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS--- 98
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVH-----ICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
LDN + G HG + +VLE+ + L L K +
Sbjct: 99 --------------LDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPE 143
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ ++Q ++ ++YLHN +IH D+K N+ L + D
Sbjct: 144 ARYFMRQTIQGVQYLHNN-RVIHRDLKLGNLFLNDDMD 180
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 580 FDP 582
P
Sbjct: 203 IPP 205
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
I +LG G+ V+ K + +A K+ ++ P I E+++L + N
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------HECN 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV F G + ICM ++G + ++L K+ IP + + +++ L
Sbjct: 63 SPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
YL K I+H D+KP N+L+ S +
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE 143
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 580 FDP 582
P
Sbjct: 203 IPP 205
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDPN 149
I +LG G+ V+ K + +A K+ ++ P I E+++L + N
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL--------HECN 62
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
IV F G + ICM ++G + ++L K+ IP + + +++ L
Sbjct: 63 SPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNND 235
YL K I+H D+KP N+L+ S +
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE 143
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 22 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 71
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 72 LVQL---YAVVSEEPIYIVTEYMNKG-SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 128 E-RMNYVHRDLRAANILVGEN 147
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVTEYMSKG-SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D+ N+L+G N
Sbjct: 131 E-RMNYVHRDLAAANILVGEN 150
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 22 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 71
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G + L K + L + + Q+ + Y+
Sbjct: 72 LVQL---YAVVSEEPIYIVTEYMNKG-SLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 128 E-RMNYVHRDLRAANILVGEN 147
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
+KLG G F VW+ T+ VA+K MK E + E ++K +Q +K
Sbjct: 21 KKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQ--------HDK 71
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEALEY 211
+V+L T ++ ++ E + LKS+ PL + Q+ E + +
Sbjct: 72 LVKLHAVVTKEPIY-----IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 212 LHNKCNIIHTDIKPENVLLGSN 233
+ + N IH D++ N+L+ ++
Sbjct: 127 IEQR-NYIHRDLRAANILVSAS 147
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 521 DVKLADLGNA--CWRDKHFSRD-IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
+VKL D G A D F++ + T Y S E + R Y+ +DIWS+ C+ +EL
Sbjct: 154 NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-- 211
Query: 578 YLFDPHT 584
L P T
Sbjct: 212 -LMPPFT 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA---PQYTETAIDEIKLLKCVQETDP 145
Y +++ +G G+F+ V L + R VA+KI+ P + E++++K +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN K+ ++++ + +++E G + L+ + + +Q
Sbjct: 74 --PNIVKLFEVIETEKT-------LYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQ 122
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLLGSN 233
++ A++Y H K I+H D+K EN+LL ++
Sbjct: 123 IVSAVQYCHQK-RIVHRDLKAENLLLDAD 150
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMK-SAPQYTETAIDEIKLLKCVQETDPQDPNR 150
+R++G G F V+ D + VA+K M S Q E D IK ++ +Q+ + PN
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL--RHPN- 76
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+Q + H ++ + LL+ + K + + + L+ L
Sbjct: 77 --TIQYRGCYLRE-----HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 211 YLHNKCNIIHTDIKPENVLL 230
YLH+ N+IH D+K N+LL
Sbjct: 130 YLHSH-NMIHRDVKAGNILL 148
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
++ Y + +LG G FS V C +A + A KI+ + K + D
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINT---------------KKLSARD 64
Query: 145 PQDPNRE-KIVQLLDNFTISGVH------GVHICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
Q RE +I +LL + I +H G H + V G ++ ++ +
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--D 122
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LEA+ + H + ++H D+KPEN+LL S
Sbjct: 123 ASHCIQQILEAVLHCH-QMGVVHRDLKPENLLLAS 156
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E Y + +LG G F+ V C +K + +Y I + + +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREK-----------STGLEYAAKFIKKRQSRASRRGVSR 59
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYNV 198
++ RE I++ + + + +H V+ + ++LE V G + L + + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPLL 256
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 257 HMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 177 NIFGTPEFVAPEI 189
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI + K +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 523 KLADLGNACWRDKH--FSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
K+ DLG A D+ + + T QY + E+L + Y + D WS +AFE TG F
Sbjct: 165 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
Query: 581 DPHTQ 585
P+ Q
Sbjct: 225 LPNWQ 229
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 94 KLGWGHFSTV--WLCWDKIATRFVALKIMKS--APQYTETAIDEIKLLKCVQETDPQDPN 149
+LG G F V W+ D VA+K + +P+ E EI+++K + PN
Sbjct: 22 RLGTGGFGYVLRWIHQD--TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH-----PN 74
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNK-GIPLYNVKCIVKQLLEA 208
++ D + + + + EG + K L + N G+ ++ ++ + A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L YLH IIH D+KPEN++L
Sbjct: 135 LRYLHEN-RIIHRDLKPENIVL 155
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 523 KLADLGNACWRDKH--FSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
K+ DLG A D+ + + T QY + E+L + Y + D WS +AFE TG F
Sbjct: 164 KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
Query: 581 DPHTQ 585
P+ Q
Sbjct: 224 LPNWQ 228
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 94 KLGWGHFSTV--WLCWDKIATRFVALKIMKS--APQYTETAIDEIKLLKCVQETDPQDPN 149
+LG G F V W+ D VA+K + +P+ E EI+++K + PN
Sbjct: 21 RLGTGGFGYVLRWIHQD--TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNH-----PN 73
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNK-GIPLYNVKCIVKQLLEA 208
++ D + + + + EG + K L + N G+ ++ ++ + A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L YLH IIH D+KPEN++L
Sbjct: 134 LRYLHEN-RIIHRDLKPENIVL 154
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Query: 538 SRDIQTRQYRSIEVL----LRSGYDTSADIWSVACMAFELATGDY-------LFDPHTQ 585
+RD R Y + E + R GYD +D+WS+ +ELATG + +FD TQ
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ 241
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 170 ICMVLEVEGFNT-YKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENV 228
ICM L F+ YK + + IP + I ++AL +L IIH DIKP N+
Sbjct: 98 ICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI 157
Query: 229 LL 230
LL
Sbjct: 158 LL 159
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E Y + +LG G F+ V C +K + +Y I + + +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREK-----------STGLEYAAKFIKKRQSRASRRGVSR 59
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYNV 198
++ RE I++ + + + +H V+ + ++LE V G + L + + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPLL 256
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 257 HMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 177 NIFGTPEFVAPEI 189
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E Y + +LG G F+ V C +K + +Y I + + +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREK-----------STGLEYAAKFIKKRQSRASRRGVSR 59
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYNV 198
++ RE I++ + + + +H V+ + ++LE V G + L + + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPLL 256
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 257 HMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 177 NIFGTPEFVAPEI 189
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 178 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
Query: 577 DYLFD 581
F+
Sbjct: 238 KPPFE 242
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E Y + +LG G F+ V C +K + +Y I + + +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREK-----------STGLEYAAKFIKKRQSRASRRGVSR 59
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYNV 198
++ RE I++ + + + +H V+ + ++LE V G + L + + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPLL 256
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 257 HMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 177 NIFGTPEFVAPEI 189
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 176 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
Query: 577 DYLFD 581
F+
Sbjct: 236 KPPFE 240
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 83 DLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQE 142
+LYE +Y + LG G F V C + + + K +K EI +L +
Sbjct: 2 ELYE-KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60
Query: 143 TDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLL----LKSNNKGIPLYN 197
+ I+ L ++F + M+ E + G + ++ + + N + I Y
Sbjct: 61 RN--------ILHLHESFESME----ELVMIFEFISGLDIFERINTSAFELNEREIVSY- 107
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
V Q+ EAL++LH+ NI H DI+PEN++
Sbjct: 108 ----VHQVCEALQFLHSH-NIGHFDIRPENII 134
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYL 579
++KL D G + D+ + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 146 EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
Query: 580 FDP 582
P
Sbjct: 206 RPP 208
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKL 136
+ +G+L + + I +LG G+ V+ K + +A K+ ++ P I E+++
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 137 LKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLY 196
L + N IV F G + ICM ++G + ++L K+ IP
Sbjct: 61 L--------HECNSPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQ 107
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ + +++ L YL K I+H D+KP N+L+ S +
Sbjct: 108 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 146
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLK 138
+G+L + + I +LG G+ V+ K + +A K+ ++ P I E+++L
Sbjct: 19 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 77
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+ N IV F G + ICM ++G + ++L K+ IP +
Sbjct: 78 -------HECNSPYIVGFYGAFYSDGE--ISICME-HMDGGSLDQVLKKAGR--IPEQIL 125
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+ +++ L YL K I+H D+KP N+L+ S +
Sbjct: 126 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 162
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 521 DVKLADLG-NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDY 578
++KL D G + D + + TR Y S E L + Y +DIWS+ E+A G Y
Sbjct: 162 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 220
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F VW+ W+ T VA+K +K E + E +++K ++ EK
Sbjct: 25 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR--------HEK 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+VQL + + ++I +G L K + L + + Q+ + Y+
Sbjct: 75 LVQL---YAVVSEEPIYIVTEYMSKG-CLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
+ N +H D++ N+L+G N
Sbjct: 131 E-RMNYVHRDLRAANILVGEN 150
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 86 EQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
E Y + +LG G F+ V C +K + +Y I + + +
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREK-----------STGLEYAAKFIKKRQSRASRRGVSR 59
Query: 146 QDPNRE-KIVQLLDNFTISGVHGVH-----ICMVLE-VEGFNTYKLLLKSNNKGIPLYNV 198
++ RE I++ + + + +H V+ + ++LE V G + L + + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEA 117
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQV--LKENLPLL 256
+KQ+L+ + YLH K I H D+KPEN++L N I + L + +++ +
Sbjct: 118 TSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 257 HMRNIPSFIQKQL 269
++ P F+ ++
Sbjct: 177 NIFGTPEFVAPEI 189
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 154 LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Query: 577 DYLFD 581
F+
Sbjct: 214 KPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 158 LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
Query: 577 DYLFD 581
F+
Sbjct: 218 KPPFE 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++LE V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILILELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 479 IRLNIKHKWDERLSHKDKTCKEDNVPSYPRDNVNPAKD--ICHIDVKLADLGNACWRDKH 536
I L +KH D ++ H+D K N+ +D D I + +L AC
Sbjct: 134 ICLALKHVHDRKILHRD--IKSQNI-FLTKDGTVQLGDFGIARVLNSTVELARAC----- 185
Query: 537 FSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLFD 581
I T Y S E+ Y+ +DIW++ C+ +EL T + F+
Sbjct: 186 ----IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 154 LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 213
Query: 577 DYLFD 581
F+
Sbjct: 214 KPPFE 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
++ LG G F V L +K R+ A+KI+K E + + ++ + E +R
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKK-----EVIVAKDEVAHTLTENRVLQNSRH 69
Query: 152 KIVQLLD-NFTISGVHGVHICMVLEVEGFNTYKLLLK-SNNKGIPLYNVKCIVKQLLEAL 209
+ L +F +C V+E N +L S + + +++ AL
Sbjct: 70 PFLTALKYSFQTHD----RLCFVMEYA--NGGELFFHLSRERVFSEDRARFYGAEIVSAL 123
Query: 210 EYLHNKCNIIHTDIKPENVLL 230
+YLH++ N+++ D+K EN++L
Sbjct: 124 DYLHSEKNVVYRDLKLENLML 144
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 522 VKLADLG---NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDY 578
+KL D G A +K T +Y + EV+ R G+ SAD WS + FE+ TG
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 579 LF 580
F
Sbjct: 229 PF 230
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATR-----FVALKIMKSAPQYTETAIDEIKLLKCVQETDP 145
+++ LG G F V+L + TR A+K++K A T D ++ ++
Sbjct: 32 LLKVLGQGSFGKVFLV--RKVTRPDSGHLYAMKVLKKA---TLKVRDRVR--TKMERDIL 84
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
D N +V+L F G + ++L+ + G + + L S +VK + +
Sbjct: 85 ADVNHPFVVKLHYAFQTEG----KLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAE 138
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
L L++LH+ II+ D+KPEN+LL
Sbjct: 139 LALGLDHLHS-LGIIYRDLKPENILL 163
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 522 VKLADLGNACWRDKHFSRD-------IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELA 574
VKL DLG + FS + T Y S E + +GY+ +DIWS+ C+ +E+A
Sbjct: 175 VKLGDLGLG----RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230
Query: 575 T 575
Sbjct: 231 A 231
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 93 RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP-QDPNRE 151
+K+G G FS V+ + VALK ++ +D C++E D + N
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQ-----IFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 152 KIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG---IPLYNVKCIVKQLLEA 208
+++ +F + + +VLE+ ++K K IP V QL A
Sbjct: 93 NVIKYYASF----IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNN 234
LE++H++ ++H DIKP NV + +
Sbjct: 149 LEHMHSR-RVMHRDIKPANVFITATG 173
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+AD G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ +G G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTIGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
++ LG G F V L +K R+ A+KI+K E + + ++ + E +R
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKK-----EVIVAKDEVAHTLTENRVLQNSRH 67
Query: 152 KIVQLLD-NFTISGVHGVHICMVLEVEGFNTYKLLLK-SNNKGIPLYNVKCIVKQLLEAL 209
+ L +F +C V+E N +L S + + +++ AL
Sbjct: 68 PFLTALKYSFQTHD----RLCFVMEYA--NGGELFFHLSRERVFSEDRARFYGAEIVSAL 121
Query: 210 EYLHNKCNIIHTDIKPENVLL 230
+YLH++ N+++ D+K EN++L
Sbjct: 122 DYLHSEKNVVYRDLKLENLML 142
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ I++++LE LEYLH K IH D+K N+LLG +
Sbjct: 122 TIATILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDG 158
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 13/61 (21%)
Query: 516 DICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
DI V+ +G CW ++ GYD ADIWS A ELAT
Sbjct: 176 DITRNKVRKTFVGTPCWMAPEVMEQVR-------------GYDFKADIWSFGITAIELAT 222
Query: 576 G 576
G
Sbjct: 223 G 223
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSA---PQYTETAIDEIKLLKCVQETDP 145
Y + + +G G+F+ V L + R VA+KI+ P + E++++K +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
PN K+ ++++ + +V+E G + L+ + + +Q
Sbjct: 74 --PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ 122
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ A++Y H K I+H D+K EN+LL
Sbjct: 123 IVSAVQYCHQKY-IVHRDLKAENLLL 147
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
++ LG G F V L +K R+ A+KI+K E + + ++ + E +R
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILKK-----EVIVAKDEVAHTLTENRVLQNSRH 68
Query: 152 KIVQLLD-NFTISGVHGVHICMVLEVEGFNTYKLLLK-SNNKGIPLYNVKCIVKQLLEAL 209
+ L +F +C V+E N +L S + + +++ AL
Sbjct: 69 PFLTALKYSFQTHD----RLCFVMEYA--NGGELFFHLSRERVFSEDRARFYGAEIVSAL 122
Query: 210 EYLHNKCNIIHTDIKPENVLL 230
+YLH++ N+++ D+K EN++L
Sbjct: 123 DYLHSEKNVVYRDLKLENLML 143
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+AD G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ +G G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTIGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E + G + + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+AD G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ +G G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTIGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E + G + + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 63 NDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKS 122
+DN +++ V P + + E Y ++ LG G F V L +K R+ A+KI+K
Sbjct: 129 SDNSGAEEMEVSLAKPKHRVTMNEFEY--LKLLGKGTFGKVILVKEKATGRYYAMKILKK 186
Query: 123 APQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLD-NFTISGVHGVHICMVLEVEGFNT 181
E + + ++ + E +R + L +F +C V+E N
Sbjct: 187 -----EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLCFVMEYA--NG 235
Query: 182 YKLLLK-SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
+L S + + +++ AL+YLH++ N+++ D+K EN++L + HI
Sbjct: 236 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-DKDGHI 291
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAIDEIKLLKCV 140
Q+Y + K+G G + TV+ ++ VALK ++ P +A+ EI LLK +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS---SALREICLLKEL 58
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHG-VHICMVLEVEGFNTYKLLLKSNNKGIPLYNVK 199
+ + IV+L D +H + +V E K S N + VK
Sbjct: 59 KHKN--------IVRLHDV-----LHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVK 104
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKENLPL 255
+ QLL+ L + H++ N++H D+KP+N+L+ N EL L + +P+
Sbjct: 105 SFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNG----ELKLANFGLARAFGIPV 155
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELA-T 575
++KLA+ G A + +S ++ T YR +VL + Y TS D+WS C+ ELA
Sbjct: 139 ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 576 GDYLF 580
G LF
Sbjct: 199 GRPLF 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYT----ETAIDEIKLLKCVQETDPQD 147
R LG G F V+ C K + A K + + A+ E K+L V
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV------- 242
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEV--EGFNTYKLL-LKSNNKGIPLYNVKCIVKQ 204
+ IV L F +C+V+ + G Y + + +N G Q
Sbjct: 243 -HSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ LE+LH + NII+ D+KPENVLL
Sbjct: 298 IVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G F V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 68
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 69 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 122 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 151
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYT----ETAIDEIKLLKCVQETDPQD 147
R LG G F V+ C K + A K + + A+ E K+L V
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV------- 242
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEV--EGFNTYKLL-LKSNNKGIPLYNVKCIVKQ 204
+ IV L F +C+V+ + G Y + + +N G Q
Sbjct: 243 -HSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ LE+LH + NII+ D+KPENVLL
Sbjct: 298 IVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G + V L +++ VA+KI MK A E EI C+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI----CINAML---- 62
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 117
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 118 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 153
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 63 NDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKS 122
+DN +++ V P + + E Y ++ LG G F V L +K R+ A+KI+K
Sbjct: 126 SDNSGAEEMEVSLAKPKHRVTMNEFEY--LKLLGKGTFGKVILVKEKATGRYYAMKILKK 183
Query: 123 APQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLD-NFTISGVHGVHICMVLEVEGFNT 181
E + + ++ + E +R + L +F +C V+E N
Sbjct: 184 -----EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLCFVMEYA--NG 232
Query: 182 YKLLLK-SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
+L S + + +++ AL+YLH++ N+++ D+K EN++L + HI
Sbjct: 233 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-DKDGHI 288
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP--QDPNREK 152
LG G V C+ + + ALK++ +P K QE D Q
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSP-------------KARQEVDHHWQASGGPH 64
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEAL 209
IV +LD + +H C+++ +E +L + +G + I++ + A+
Sbjct: 65 IVCILDVY--ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 210 EYLHNKCNIIHTDIKPENVLLGS 232
++LH+ NI H D+KPEN+L S
Sbjct: 123 QFLHSH-NIAHRDVKPENLLYTS 144
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFEL 573
ID AD + + + TR YR+ EV+L S Y + D+WS C+ EL
Sbjct: 162 IDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+++ + Q L A++ LH N+IH D+KP N+L+ SN D
Sbjct: 113 HIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 171 LAYIHS-FGICHRDIKPQNLLL 191
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 169 LAYIHS-FGICHRDIKPQNLLL 189
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+AD G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 181 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
IR LG G F V L K A+KI+ D+ K++K Q + E
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKIL-----------DKQKVVKLKQIEHTLN---E 92
Query: 152 KIVQLLDNFTI------SGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
K +Q NF S ++ MVLE G + L + P + + Q
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 150
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 IVLTFEYLHS-LDLIYRDLKPENLLI 175
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ I++++LE LEYLH K IH D+K N+LLG +
Sbjct: 117 TIATILREVLEGLEYLH-KNGQIHRDVKAGNILLGEDG 153
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 13/61 (21%)
Query: 516 DICHIDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELAT 575
DI V+ +G CW ++ GYD ADIWS A ELAT
Sbjct: 171 DITRNKVRKTFVGTPCWMAPEVMEQVR-------------GYDFKADIWSFGITAIELAT 217
Query: 576 G 576
G
Sbjct: 218 G 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYT----ETAIDEIKLLKCVQETDPQD 147
R LG G F V+ C K + A K + + A+ E K+L V
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV------- 242
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEV--EGFNTYKLL-LKSNNKGIPLYNVKCIVKQ 204
+ IV L F +C+V+ + G Y + + +N G Q
Sbjct: 243 -HSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ LE+LH + NII+ D+KPENVLL
Sbjct: 298 IVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 163 LAYIHS-FGICHRDIKPQNLLL 183
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 169 LAYIHS-FGICHRDIKPQNLLL 189
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQET-DPQ 146
RY + LG+G S V L D R VA+K++++ + A D L+ +E +
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N IV + G +V+E T + ++ + P ++ ++
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE-VIADAC 126
Query: 207 EALEYLHNKCNIIHTDIKPENVLLGSNN 234
+AL + H IIH D+KP N+++ + N
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMISATN 153
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 523 KLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
+AD GN+ + I T QY S E D +D++S+ C+ +E+ TG+ F
Sbjct: 165 AIADSGNSVTQTAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ 146
Q + ++R +G G ++ V L K R A+K++K + ID ++ K V E
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE------VEGFNTYKLLLK-SNNKGIPLYNVK 199
P F + G+H C E +E N L+ + +P + +
Sbjct: 80 HP-----------FLV----GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 124
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
++ AL YLH + II+ D+K +NVLL S HI
Sbjct: 125 FYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG-HI 160
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 173 LAYIHS-FGICHRDIKPQNLLL 193
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
+ R LG G F V+L +K +ALK++ + E +++ +E + Q R
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR-----REIEIQSHLR 73
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+ + N+ +++ + G YK L K +++L +AL
Sbjct: 74 HPNILRMYNY-FHDRKRIYLMLEFAPRG-ELYKELQKHGR--FDEQRSATFMEELADALH 129
Query: 211 YLHNKCNIIHTDIKPENVLLGSNND 235
Y H + +IH DIKPEN+L+G +
Sbjct: 130 YCHER-KVIHRDIKPENLLMGYKGE 153
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 198 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 234
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 89 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 142
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 143 HSQ-GIMHRDVKPHNVMI 159
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 520 IDVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
++VK+ D G A + R T Y + EVL + G+ D+WS+ C+ + L G
Sbjct: 152 LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Query: 577 DYLFD 581
F+
Sbjct: 212 KPPFE 216
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 90 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 143
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 144 HSQ-GIMHRDVKPHNVMI 160
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP--QDPNREK 152
LG G V C+ + + ALK++ +P K QE D Q
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSP-------------KARQEVDHHWQASGGPH 83
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYN---VKCIVKQLLEAL 209
IV +LD + +H C+++ +E +L + +G + I++ + A+
Sbjct: 84 IVCILDVY--ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 210 EYLHNKCNIIHTDIKPENVLLGS 232
++LH+ NI H D+KPEN+L S
Sbjct: 142 QFLHSH-NIAHRDVKPENLLYTS 163
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 89 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 142
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 143 HSQ-GIMHRDVKPHNVMI 159
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 109 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 162
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 163 HSQ-GIMHRDVKPHNVMI 179
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 20/146 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYT----ETAIDEIKLLKCVQETDPQD 147
R LG G F V+ C K + A K + + A+ E K+L V
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV------- 242
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEV--EGFNTYKLL-LKSNNKGIPLYNVKCIVKQ 204
+ IV L F +C+V+ + G Y + + +N G Q
Sbjct: 243 -HSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
++ LE+LH + NII+ D+KPENVLL
Sbjct: 298 IVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETDPQDPNREKI 153
LG G F V C + +A KI+K+ + E +EI ++ + + +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHAN--------L 148
Query: 154 VQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
+QL D F I +V+E V+G + ++ + L + +KQ+ E + ++
Sbjct: 149 IQLYDAFESKN----DIVLVMEYVDGGELFDRIIDESYNLTELDTI-LFMKQICEGIRHM 203
Query: 213 HNKCNIIHTDIKPENVL 229
H + I+H D+KPEN+L
Sbjct: 204 H-QMYILHLDLKPENIL 219
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 135 LAYIHS-FGICHRDIKPQNLLL 155
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
+ R LG G F V+L +K +ALK++ + E +++ +E + Q R
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR-----REIEIQSHLR 72
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+ + N+ +++ + G YK L K +++L +AL
Sbjct: 73 HPNILRMYNY-FHDRKRIYLMLEFAPRG-ELYKELQKHGR--FDEQRSATFMEELADALH 128
Query: 211 YLHNKCNIIHTDIKPENVLLGSNND 235
Y H + +IH DIKPEN+L+G +
Sbjct: 129 YCHER-KVIHRDIKPENLLMGYKGE 152
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK------SAPQYTETAIDEIKLLKCV 140
Q+Y + K+G G + TV+ ++ VALK ++ P +A+ EI LLK +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS---SALREICLLKEL 58
Query: 141 QETDPQDPNREKIVQLLDNFTISGVHG-VHICMVLEVEGFNTYKLLLKSNNKGIPLYNVK 199
+ + IV+L D +H + +V E K S N + VK
Sbjct: 59 KHKN--------IVRLHDV-----LHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVK 104
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKENLPL 255
+ QLL+ L + H++ N++H D+KP+N+L+ N EL L + +P+
Sbjct: 105 SFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNG----ELKLADFGLARAFGIPV 155
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 521 DVKLADLGNACWRD---KHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFELA 574
++KLAD G A + +S ++ T YR +VL + Y TS D+WS C+ ELA
Sbjct: 139 ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 124 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 160
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIM----------KSAPQYTETAIDEIKLLKCVQETD 144
LG G S V C K + A+KI+ + + E + E+ +L+ V
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--- 81
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN--TYKLLLKSNNKGIPLYNVKCIV 202
PN I+QL D + + + ++ + E F+ T K+ L + I+
Sbjct: 82 -GHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-------TRKIM 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ LLE + LH K NI+H D+KPEN+LL
Sbjct: 131 RALLEVICALH-KLNIVHRDLKPENILL 157
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 535 KHFSRDIQTRQYRSIE-VLLRSGYDTSADIWSVACMAFEL 573
K + + TR YR+ E +LL+ Y S DIWS C+ EL
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 23/150 (15%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y + +G G + V+L +DK + VA+ K + E ID ++L+ +
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAI---KKVNRMFEDLIDCKRILREITIL----- 79
Query: 149 NREK---IVQLLDNFTISGVHGV-HICMVLEVEGFNTYKLLLKSNNKGIPLY----NVKC 200
NR K I++L D + + +VLE+ + KL P++ ++K
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF------KTPIFLTEEHIKT 133
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I+ LL ++H + IIH D+KP N LL
Sbjct: 134 ILYNLLLGENFIH-ESGIIHRDLKPANCLL 162
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 147 LAYIHS-FGICHRDIKPQNLLL 167
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIM----------KSAPQYTETAIDEIKLLKCVQETD 144
LG G S V C K + A+KI+ + + E + E+ +L+ V
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--- 81
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN--TYKLLLKSNNKGIPLYNVKCIV 202
PN I+QL D + + + ++ + E F+ T K+ L + I+
Sbjct: 82 -GHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-------TRKIM 130
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ LLE + LH K NI+H D+KPEN+LL
Sbjct: 131 RALLEVICALH-KLNIVHRDLKPENILL 157
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T + + EVL R GYD + DIWS+ + + + TG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 148 LAYIHS-FGICHRDIKPQNLLL 168
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 154 LAYIHS-FGICHRDIKPQNLLL 174
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 143 LAYIHS-FGICHRDIKPQNLLL 163
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 167
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ 146
Q + ++R +G G ++ V L K R A+K++K + ID ++ K V E Q
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE---Q 61
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE------VEGFNTYKLLLK-SNNKGIPLYNVK 199
N +V G+H C E +E N L+ + +P + +
Sbjct: 62 ASNHPFLV------------GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 109
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
++ AL YLH + II+ D+K +NVLL S HI
Sbjct: 110 FYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG-HI 145
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
IV+LLD + H ++ E +K+L + + Y+++ + +LL+AL+Y
Sbjct: 88 IVKLLD--IVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 213 HNKCNIIHTDIKPENVLL 230
H++ I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ 146
Q + ++R +G G ++ V L K R A+K++K + ID ++ K V E Q
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE---Q 65
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE------VEGFNTYKLLLK-SNNKGIPLYNVK 199
N +V G+H C E +E N L+ + +P + +
Sbjct: 66 ASNHPFLV------------GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 113
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
++ AL YLH + II+ D+K +NVLL S HI
Sbjct: 114 FYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG-HI 149
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + +E F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLL------GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ V+ V +++ ALE+LH K II+ DIK EN+LL SN
Sbjct: 159 HEVQIYVGEIVLALEHLH-KLGIIYRDIKLENILLDSNG 196
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++R +G G F V + + A+K M KCV+ + ++ +
Sbjct: 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ--------------KCVERNEVRNVFK 64
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSN-------NKGIPLYNVKCIVK 203
E +Q++ + + E + F LLL + N VK +
Sbjct: 65 E--LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC 122
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+L+ AL+YL N+ IIH D+KP+N+LL
Sbjct: 123 ELVMALDYLQNQ-RIIHRDMKPDNILL 148
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFEL 573
ID AD + + + TR YR+ EV+L S Y + D+WS C+ EL
Sbjct: 162 IDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+++ + Q L A++ LH N+IH D+KP N+L+ SN D
Sbjct: 113 HIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKI--MKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+++ LG G V L +++ VA+KI MK A E EI + K +
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------- 61
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
N E +V+ + + + + E F+ + + G+P + + QL+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAG 116
Query: 209 LEYLHNKCNIIHTDIKPENVLLGS-NNDHIFELALKT 244
+ YLH I H DIKPEN+LL +N I + L T
Sbjct: 117 VVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLAT 152
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 123 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 159
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQ-------YRSIEVLLRSGYDTSADIWSVACMAFELA 574
VKL+D G S+D+ R+ + + EV+ RS Y T DIWS+ M E+
Sbjct: 180 VKLSDFGFCA----QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
Query: 575 TGD 577
G+
Sbjct: 236 DGE 238
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ + + +L+AL YLH + +IH DIK +++LL
Sbjct: 142 QIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILL 174
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + +E F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLL------GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 535 KHFSRDIQTRQYRSIE-VLLRSGYDTSADIWSVACMAFEL 573
K + + TR YR+ E +LL+ Y S DIWS C+ EL
Sbjct: 211 KQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 79 VNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLK 138
V + D YE ++ + G G + V+L +DK A + VA+ K + E ID ++L+
Sbjct: 24 VKVPDNYEIKHLI----GRGSYGYVYLAYDKNANKNVAI---KKVNRMFEDLIDCKRILR 76
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGV-HICMVLEVEGFNTYKLLLKSNNKGIPLY- 196
+ T + I++L D + + +VLE+ + KL P++
Sbjct: 77 EI--TILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF------KTPIFL 128
Query: 197 ---NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+VK I+ LL +++H + IIH D+KP N LL
Sbjct: 129 TEQHVKTILYNLLLGEKFIH-ESGIIHRDLKPANCLL 164
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 94 KLGWGHFSTVWL-CWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V++ W K + VA+K +K E + E ++K ++ PN
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 89
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGF-NTYKLLLKSNNKGIPLYNVKCIVKQLLEALEY 211
+VQLL T+ +V E + N L + N + + + + Q+ A+EY
Sbjct: 90 LVQLLGVCTLEP----PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 212 LHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
L K N IH D+ N L+G N H+ ++A
Sbjct: 146 LEKK-NFIHRDLAARNCLVGEN--HVVKVA 172
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIM----------KSAPQYTETAIDEIKLLKCVQETD 144
LG G S V C K + A+KI+ + + E + E+ +L+ V
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--- 68
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN--TYKLLLKSNNKGIPLYNVKCIV 202
PN I+QL D + + + ++ + E F+ T K+ L + I+
Sbjct: 69 -GHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-------TRKIM 117
Query: 203 KQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ LLE + LH K NI+H D+KPEN+LL
Sbjct: 118 RALLEVICALH-KLNIVHRDLKPENILL 144
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
T +Y + EV+ R G+ SAD WS + FE+ TG F
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+VK + +L AL++LH+ II+ D+KPEN+LL
Sbjct: 127 DVKFYLAELALALDHLHS-LGIIYRDLKPENILL 159
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 155
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 153 IVQLLDNFTISGVHG--VHICMVLEVEGFNTYKLL--LKSNNKGIPLYNVKCIVKQLLEA 208
IV+L F SG V++ +VL+ Y++ + +P+ VK + QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
L Y+H+ I H DIKP+N+LL
Sbjct: 135 LAYIHS-FGICHRDIKPQNLLL 155
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 155
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 155
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 88 RYFVI------RKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQ 141
R+F I R LG G F V+L +K + VALK++ + Q + ++ +
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-QIEKEGVEHQLRREIEI 76
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFN-TYKLLLKSNNKGIPLYNVKC 200
+ PN I++L + F I ++LE YK L KS
Sbjct: 77 QAHLHHPN---ILRLYNYFYDRR----RIYLILEYAPRGELYKELQKSCT--FDEQRTAT 127
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPEN 227
I+++L +AL Y H K +IH DIKPEN
Sbjct: 128 IMEELADALMYCHGK-KVIHRDIKPEN 153
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 120 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 156
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 155
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 522 VKLADLGNACWRDKHFSRDIQTR----QYRSIEVLLRSGYDTSADIWSVACMAFELATGD 577
VKL D G C H T +Y + E+L+RSG++ + D WS+ + +++ TG
Sbjct: 160 VKLTDFG-LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218
Query: 578 YLF 580
F
Sbjct: 219 PPF 221
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI-VKQLLEALEY 211
IV L+ F G + L +E + +L ++ +GI + + C + ++ AL +
Sbjct: 83 IVDLIYAFQTGGK------LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 212 LHNKCNIIHTDIKPENVLL 230
LH K II+ D+KPEN++L
Sbjct: 137 LHQK-GIIYRDLKPENIML 154
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 193 IPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+P+ VK + QL +L Y+H+ I H DIKP+N+LL
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLL 155
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
T +Y + EV+ R G+ SAD WS + FE+ TG F
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+VK + +L AL++LH+ II+ D+KPEN+LL
Sbjct: 128 DVKFYLAELALALDHLHS-LGIIYRDLKPENILL 160
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
T +Y + EV+ R G+ SAD WS + FE+ TG F
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+VK + +L AL++LH+ II+ D+KPEN+LL
Sbjct: 127 DVKFYLAELALALDHLHS-LGIIYRDLKPENILL 159
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 519 HIDVKLADLGNACWRDK----HFSRDIQTRQYRSIEVLLRSG----YDTSADIWSVACMA 570
H +KLAD G D+ H + T Y S EVL G Y D WSV
Sbjct: 210 HGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 269
Query: 571 FELATGDYLFDPHTQNG-WTRNEDH 594
FE+ GD F + G +++ DH
Sbjct: 270 FEMLVGDTPFYADSLVGTYSKIMDH 294
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD- 147
Y V++ +G G F V L K + + A+K++ + + IK + +D
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLL--------SKFEMIKRSDSAFFWEERDI 128
Query: 148 ---PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
N +VQL F ++ MV+E + G + L+ +N +P K
Sbjct: 129 MAFANSPWVVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTA 181
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
+++ AL+ +H+ +IH D+KP+N+LL
Sbjct: 182 EVVLALDAIHS-MGLIHRDVKPDNMLL 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 68
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + +E F TY LL + N + + + + Q+ A
Sbjct: 69 LVQLL------GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 122 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 151
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 83 DLYEQRYFVIRKLGWGHFSTVWLCW-----DKIATRFVALKIMKSAPQYTETAIDEIKLL 137
D+ ++ + +K+G G F ++L + +K A V ++ ++ P ++E L
Sbjct: 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSE--------L 84
Query: 138 KCVQETDPQDPNREKI-VQLLDNFTISGVHGVHIC---------MVLEVEGFNTYKLLLK 187
K Q +D ++ I + LD I +G + MV+E G + K+
Sbjct: 85 KFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKI--S 142
Query: 188 SNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
N V + ++L+ LEY+H +H DIK N+LLG N LA
Sbjct: 143 GQNGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQVYLA 195
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 113
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 114 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 163
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 164 MLEAVHTIHQH-GIVHSDLKPANFLI 188
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 113
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 114 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 163
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 164 MLEAVHTIHQH-GIVHSDLKPANFLI 188
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG+G TV + R VA+K M + + A+ EIKLL + D + R
Sbjct: 41 LGYGSSGTV-VFQGSFQGRPVAVKRM--LIDFCDIALMEIKLL--TESDDHPNVIRYYCS 95
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHN 214
+ D F + ++ + VE N LK + YN +++Q+ + +LH+
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE----YNPISLLRQIASGVAHLHS 151
Query: 215 KCNIIHTDIKPENVLLGSNN 234
IIH D+KP+N+L+ +++
Sbjct: 152 -LKIIHRDLKPQNILVSTSS 170
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLF 580
T +Y + E+L+RSG++ + D WS+ + +++ TG F
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI-VKQLLEALEY 211
IV L+ F G + L +E + +L ++ +GI + + C + ++ AL +
Sbjct: 83 IVDLIYAFQTGGK------LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 212 LHNKCNIIHTDIKPENVLL 230
LH K II+ D+KPEN++L
Sbjct: 137 LHQK-GIIYRDLKPENIML 154
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG+G TV + R VA+K M + + A+ EIKLL + D + R
Sbjct: 41 LGYGSSGTV-VFQGSFQGRPVAVKRM--LIDFCDIALMEIKLL--TESDDHPNVIRYYCS 95
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHN 214
+ D F + ++ + VE N LK + YN +++Q+ + +LH+
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE----YNPISLLRQIASGVAHLHS 151
Query: 215 KCNIIHTDIKPENVLLGSNN 234
IIH D+KP+N+L+ +++
Sbjct: 152 -LKIIHRDLKPQNILVSTSS 170
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
+ ++ +G G + V+ + A+K+M E EI +LK +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK-------KYS 78
Query: 149 NREKIVQLLDNFTISGVHGV--HICMVLEVEGFNTYKLLLKSNNKGIPLYN--VKCIVKQ 204
+ I F G+ + +V+E G + L+K N KG L + I ++
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK-NTKGNTLKEEWIAYICRE 137
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+L L +LH +IH DIK +NVLL N +
Sbjct: 138 ILRGLSHLHQH-KVIHRDIKGQNVLLTENAE 167
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 521 DVKLADLGNACWRDKHFSRD---IQTRQYRSIEVLL-----RSGYDTSADIWSVACMAFE 572
+VKL D G + D+ R I T + + EV+ + YD +D+WS+ A E
Sbjct: 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
Query: 573 LATG 576
+A G
Sbjct: 227 MAEG 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 87 QRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ 146
Q + ++R +G G ++ V L K R A++++K + ID ++ K V E
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 147 DPNREKIVQLLDNFTISGVHGVHICMVLE------VEGFNTYKLLLK-SNNKGIPLYNVK 199
P F + G+H C E +E N L+ + +P + +
Sbjct: 112 HP-----------FLV----GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 156
Query: 200 CIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
++ AL YLH + II+ D+K +NVLL S HI
Sbjct: 157 FYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEG-HI 192
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 75
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 76 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 129 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 158
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 27/163 (16%)
Query: 80 NIGDLYEQRYFVIRKLGWGHFSTVWLCWDK-----IATRFVALKIMKSAPQYT--ETAID 132
N+ D Y+ +LG G F+ V C +K A +F+ + KS+ + E
Sbjct: 8 NVDDYYDTG----EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 133 EIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNK 191
E+ +LK +Q PN + ++ +N T + ++ E V G + L + +
Sbjct: 64 EVSILKEIQH-----PNVITLHEVYENKT-------DVILIGELVAGGELFDFL--AEKE 109
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ +KQ+L + YLH+ I H D+KPEN++L N
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRN 151
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+++ + Q L A++ LH N+IH D+KP N+L+ SN D
Sbjct: 113 HIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 520 IDVKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSG-YDTSADIWSVACMAFEL 573
ID AD + + TR YR+ EV+L S Y + D+WS C+ EL
Sbjct: 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 98 GHFSTVWLCWDKIATRFVALKIMKS-APQYTETAIDEIKLLKCVQETDPQDPNREKIVQL 156
G F V+ +K + A K++ + + + E + EI +L PN IV+L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PN---IVKL 72
Query: 157 LDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKC 216
LD F ++ +++E ++ + + ++ + KQ L+AL YLH+
Sbjct: 73 LDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN- 127
Query: 217 NIIHTDIKPENVLLGSNND 235
IIH D+K N+L + D
Sbjct: 128 KIIHRDLKAGNILFTLDGD 146
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLLEALEY 211
IVQ F + + + +E+ G KL K +G IP + + +++AL Y
Sbjct: 86 IVQCFGTF----ITNTDVFIAMELMGTCAEKL--KKRMQGPIPERILGKMTVAIVKALYY 139
Query: 212 LHNKCNIIHTDIKPENVLL 230
L K +IH D+KP N+LL
Sbjct: 140 LKEKHGVIHRDVKPSNILL 158
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 522 VKLADLG--NACWRDKHFSRDIQTRQYRSIEVL-----LRSGYDTSADIWSVACMAFELA 574
+KL D G DK R Y + E + + YD AD+WS+ ELA
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 575 TGDYLF 580
TG + +
Sbjct: 224 TGQFPY 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +Q+LEAL Y+H++ IIH D+KP N+ +
Sbjct: 121 LFRQILEALSYIHSQ-GIIHRDLKPMNIFI 149
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +Q+LEAL Y+H++ IIH D+KP N+ +
Sbjct: 121 LFRQILEALSYIHSQ-GIIHRDLKPMNIFI 149
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 113
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 114 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 163
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 164 MLEAVHTIHQH-GIVHSDLKPANFLI 188
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 32 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 78
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQI 136
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 137 VLTFEYLHS-LDLIYRDLKPENLLI 160
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 522 VKLADLGNACWRDKHFSRD---IQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGD- 577
+KL+D G K + + T + + EV+ R Y T DIWS+ M E+ G+
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 578 -YLFDPHTQ 585
Y +P Q
Sbjct: 240 PYFNEPPLQ 248
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ + +L AL YLHN+ +IH DIK +++LL S+
Sbjct: 142 QIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG 178
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY +++ +G G+F L DK A VA+K ++ + E EI + +
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHRSLRH 74
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLL 206
PN + +++ T H+ +V+E +L + N G + +QL+
Sbjct: 75 PNIVRFKEVILTPT-------HLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLI 125
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H + H D+K EN LL
Sbjct: 126 SGVSYAH-AMQVAHRDLKLENTLL 148
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 522 VKLADLG--NACWRDKHFSRDIQTRQYRSIEVLLRSGYDTS-ADIWSVACMAFELATGDY 578
+K+AD G A + T Y + EVLL+ YD AD+WS + + G Y
Sbjct: 156 LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 579 LFD 581
F+
Sbjct: 216 PFE 218
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 68
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 69 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 122 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 151
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +++A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG+G TV + R VA+K M + + A+ EIKLL + D + R
Sbjct: 23 LGYGSSGTV-VFQGSFQGRPVAVKRM--LIDFCDIALMEIKLL--TESDDHPNVIRYYCS 77
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHN 214
+ D F + ++ + VE N LK + YN +++Q+ + +LH+
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE----YNPISLLRQIASGVAHLHS 133
Query: 215 KCNIIHTDIKPENVLLGSNN 234
IIH D+KP+N+L+ +++
Sbjct: 134 -LKIIHRDLKPQNILVSTSS 152
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 100 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 152
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREKIV 154
LG+G TV + R VA+K M + + A+ EIKLL + D + R
Sbjct: 23 LGYGSSGTV-VFQGSFQGRPVAVKRM--LIDFCDIALMEIKLL--TESDDHPNVIRYYCS 77
Query: 155 QLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHN 214
+ D F + ++ + VE N LK + YN +++Q+ + +LH+
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE----YNPISLLRQIASGVAHLHS 133
Query: 215 KCNIIHTDIKPENVLLGSNN 234
IIH D+KP+N+L+ +++
Sbjct: 134 -LKIIHRDLKPQNILVSTSS 152
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 71
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + +E F TY LL + N + + + + Q+ A
Sbjct: 72 LVQLL------GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 125 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 154
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 550 EVLLRSGYDTSADIWSVACMAFELATG 576
E++L GY+ + D W++ + +E+A G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + ++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LE++ Y H+ I+H ++KPEN+LL S
Sbjct: 134 IQQILESIAYCHSN-GIVHRNLKPENLLLAS 163
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 120 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 172
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 173 LTFEYLHS-LDLIYRDLKPENLLI 195
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLMI 174
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 522 VKLADLGNACWRDKHFSRDIQ----------TRQYRSIEVLLRSGYDTSA-DIWSVACMA 570
VK+AD+G A + F+ ++ T YR+ E+LL + + T A DIW++ C+
Sbjct: 171 VKIADMGFA----RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF 226
Query: 571 FELATGDYLFDPHTQNGWTRNEDH 594
EL T + +F ++ T N H
Sbjct: 227 AELLTSEPIFHCRQEDIKTSNPYH 250
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 187 KSNNKGI--PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
K+N K + P VK ++ Q+L+ + YLH ++H D+KP N+L+
Sbjct: 117 KANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILV 161
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLMI 175
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLMI 174
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E G + L + P + + Q++
Sbjct: 100 -NFPFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIV 152
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+++
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLMI 175
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLMI 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
+K+ D G A T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLMI 175
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 75
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + +E F TY LL + N + + + + Q+ A
Sbjct: 76 LVQLL------GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 129 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 158
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEYSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 81 IGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKL 136
+ DL+ Y +++ +G G+F+ V L + + VA+KI+ Q +++ E+++
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRI 59
Query: 137 LKCVQETDPQDPNREKIVQLLDN-----FTISGVHGVHICMVLEVEGFNTYKLLLKSNNK 191
+K + PN K+ ++++ + G + L G+ K
Sbjct: 60 MKVLNH-----PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-------- 106
Query: 192 GIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
+ +Q++ A++Y H K I+H D+K EN+LL ++
Sbjct: 107 -----EARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLLDAD 142
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEYSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 47 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 93
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E V G + L + P + + Q+
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQI 151
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 VLTFEYLHS-LDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 91
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 92 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIV 144
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 145 LTFEYLHS-LDLIYRDLKPENLLI 167
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T + + EVL R GYD + DIWS+ + + TG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+V+ + AL++LHNK I H D+KPEN+L
Sbjct: 116 VVQDVASALDFLHNK-GIAHRDLKPENIL 143
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEYSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+V+ + AL++LHNK I H D+KPEN+L
Sbjct: 116 VVQDVASALDFLHNK-GIAHRDLKPENIL 143
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K ++E + N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVK-LKEIE-HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLMI 174
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 100 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 152
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLI 175
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 91
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 92 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 144
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 145 LTFEYLHS-LDLIYRDLKPENLLI 167
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 93
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 94 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIV 146
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 147 LTFEYLHS-LDLIYRDLKPENLLI 169
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 100 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 152
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLI 175
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LE++ Y H+ I+H ++KPEN+LL S
Sbjct: 110 IQQILESIAYCHSN-GIVHRNLKPENLLLAS 139
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LE++ Y H+ I+H ++KPEN+LL S
Sbjct: 111 IQQILESIAYCHSN-GIVHRNLKPENLLLAS 140
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K ++E + N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVK-LKEIE-HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLMI 174
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 85
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 86 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 138
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 139 LTFEYLHS-LDLIYRDLKPENLLI 161
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 100 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 152
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLI 175
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K A+KI+ + E ++E ++L+ V
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 120 -NFPFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIV 172
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 173 LTFEYLHS-LDLIYRDLKPENLLI 195
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
I+ LG G F V L +K M++ Y +D+ K++K Q N +
Sbjct: 46 IKTLGTGSFGRVML-----------VKHMETGNHYAMKILDKQKVVKLKQIE--HTLNEK 92
Query: 152 KIVQ-----LLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQL 205
+I+Q L S ++ MV+E G + L + P + + Q+
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQI 150
Query: 206 LEALEYLHNKCNIIHTDIKPENVLL 230
+ EYLH+ ++I+ D+KPEN+++
Sbjct: 151 VLTFEYLHS-LDLIYRDLKPENLMI 174
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LE++ Y H+ I+H ++KPEN+LL S
Sbjct: 111 IQQILESIAYCHSN-GIVHRNLKPENLLLAS 140
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 120 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIV 172
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 173 LTFEYLHS-LDLIYRDLKPENLLI 195
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E++L GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+L+
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLI 174
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 75
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 76 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 129 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 158
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 72
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 73 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 126 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 155
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 83
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 84 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 137 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 71
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 72 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 125 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 154
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 72
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 73 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 126 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 155
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y + +LG G FS V C +KI + +Y I+ KL D Q
Sbjct: 6 YQLFEELGKGAFSVVRRC----------MKI-PTGQEYAAKIINTKKL----SARDHQKL 50
Query: 149 NRE-KIVQLLDNFTISGVH------GVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
RE +I +LL + I +H G H + V G ++ ++ +
Sbjct: 51 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHC 108
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
++Q+LE++ + H I+H D+KPEN+LL S +
Sbjct: 109 IQQILESVNHCHLN-GIVHRDLKPENLLLASKS 140
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 72
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 73 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 126 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 155
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 277
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + E F TY LL + N + + + + Q+ A
Sbjct: 278 LVQLL------GVCTREPPFYIITE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH ++ N L+G N H+ ++A
Sbjct: 331 MEYLEKK-NFIHRNLAARNCLVGEN--HLVKVA 360
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 75
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 76 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 129 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 158
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Query: 94 KLGWGHFSTVWLC-WDK-IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNRE 151
++G G F TV+ W +A + LK++ P+ + +E+ +L+ + +
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKI--LKVVDPTPEQFQAFRNEVAVLRKTRHVN------- 93
Query: 152 KIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
I+ + T ++ +V + EG + YK L K ++ + I +Q + ++
Sbjct: 94 -ILLFMGYMTKD-----NLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMD 146
Query: 211 YLHNKCNIIHTDIKPENVLL 230
YLH K NIIH D+K N+ L
Sbjct: 147 YLHAK-NIIHRDMKSNNIFL 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 75
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 76 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 129 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 158
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 92 IRKLGWGHFSTVWLCWDKIATRFVALKIMKSAP----QYTETAIDEIKLLKCVQETDPQD 147
I+ LG G F V L K + A+KI+ + E ++E ++L+ V
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLL 206
N +V+L +F + ++ MV+E V G + L + P + + Q++
Sbjct: 99 -NFPFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIV 151
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
EYLH+ ++I+ D+KPEN+++
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLII 174
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T +Y + E+++ GY+ + D W++ + +E+A G
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 66
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 67 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 116
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 117 MLEAVHTIHQH-GIVHSDLKPANFLI 141
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 74
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 75 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 128 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 157
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K ++ E I+E +++ ++ + P
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVM--MKLSHP-- 62
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 63 ----KLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL C +IH D+ N L+G N
Sbjct: 115 GMAYLEEAC-VIHRDLAARNCLVGENQ 140
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K ++ E I+E +++ ++ + P
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVM--MKLSHP-- 60
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 61 ----KLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL C +IH D+ N L+G N
Sbjct: 113 GMAYLEEAC-VIHRDLAARNCLVGENQ 138
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K ++ E I+E +++ ++ + P
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVM--MKLSHP-- 65
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 66 ----KLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL C +IH D+ N L+G N
Sbjct: 118 GMAYLEEAC-VIHRDLAARNCLVGENQ 143
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LEA+ + H ++H D+KPEN+LL S
Sbjct: 109 IQQILEAVLHCHQM-GVVHRDLKPENLLLAS 138
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 83 DLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALK-IMKSAPQYTETAIDEIKLLKCVQ 141
+L E R V R L G F+ V+ D + R ALK ++ + + I E+ C
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEV----CFM 79
Query: 142 ETDPQDPNREKIVQLLDNFTI----SGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLY- 196
+ PN IVQ +I S ++ E+ + L K ++G PL
Sbjct: 80 KKLSGHPN---IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSC 135
Query: 197 -NVKCIVKQLLEALEYLH-NKCNIIHTDIKPENVLLGSNNDHI 237
V I Q A++++H K IIH D+K EN+LL SN I
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL-SNQGTI 177
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 85
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 86 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 135
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 136 MLEAVHTIHQH-GIVHSDLKPANFLI 160
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 85
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 86 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 135
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 136 MLEAVHTIHQH-GIVHSDLKPANFLI 160
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP-QDPNREKI 153
LG G F V + ++ VA+KI+ + + +IK + +Q + P+ K+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 154 VQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
Q++ T MV+E V G + + K + + + +Q+L A++Y
Sbjct: 77 YQVISTPT-------DFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYC 127
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
H ++H D+KPENVLL ++
Sbjct: 128 HRHM-VVHRDLKPENVLLDAH 147
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +Q+LEAL Y+H++ IIH ++KP N+ +
Sbjct: 121 LFRQILEALSYIHSQ-GIIHRNLKPXNIFI 149
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y + +LG G FS V C +KI + +Y I+ KL D Q
Sbjct: 6 YQLFEELGKGAFSVVRRC----------MKI-PTGQEYAAKIINTKKL----SARDHQKL 50
Query: 149 NRE-KIVQLLDNFTISGVH------GVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCI 201
RE +I +LL + I +H G H + V G ++ ++ +
Sbjct: 51 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHC 108
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
++Q+LE++ + H I+H D+KPEN+LL S +
Sbjct: 109 IQQILESVNHCHLN-GIVHRDLKPENLLLASKS 140
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 122 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 154
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 123 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 155
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y +++ +G G+F+ V L + + VA+KI+ Q +++ E++++K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNH-- 72
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN K+ ++++ + +V+E G + L+ + + +
Sbjct: 73 ---PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 120
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
Q++ A++Y H K I+H D+K EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y +++ +G G+F+ V L + + VA+KI+ Q +++ E++++K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNH-- 72
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN K+ ++++ + +V+E G + L+ + + +
Sbjct: 73 ---PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 120
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
Q++ A++Y H K I+H D+K EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 123 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 155
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T + + EVL R GYD DIWS+ + + + G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 70
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL T + + F TY LL + N + + + + Q+ A
Sbjct: 71 LVQLLGVCTREPPFYI-------ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH D+ N L+G N H+ ++A
Sbjct: 124 MEYLEKK-NFIHRDLAARNCLVGEN--HLVKVA 153
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 543 TRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
T + + EVL R GYD DIWS+ + + + G
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y +++ +G G+F+ V L + + VA+KI+ Q +++ E++++K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKT-QLNSSSLQKLFREVRIMKVLNH-- 72
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN K+ ++++ + +V+E G + L+ + + +
Sbjct: 73 ---PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 120
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
Q++ A++Y H K I+H D+K EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 122 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 154
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
+ Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 117 ARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 155
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 62 SNDNEESKDYRVGGYHPVNIGDLYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK 121
S E S+ + GY P ++Q + + +LG G + V+ K R A+K
Sbjct: 32 SFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM 91
Query: 122 S---APQYTETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEG 178
S P+ + E+ E Q P ++ Q + I + + E+ G
Sbjct: 92 SPFRGPKDRARKLAEVG----SHEKVGQHPCCVRLEQAWEEGGI-------LYLQTELCG 140
Query: 179 FNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ + ++ +P V ++ L AL +LH++ ++H D+KP N+ LG
Sbjct: 141 -PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRG 194
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 170
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 137 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 169
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 85 YEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
+ + Y + +LG G FS V C +K++ + +Y I+ KL D
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRC----------VKVL-AGQEYAAMIINTKKL----SARD 53
Query: 145 PQDPNRE-KIVQLLDNFTISGVH------GVHICMVLEVEGFNTYKLLLKSNNKGIPLYN 197
Q RE +I +LL + I +H G H + V G ++ ++ +
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--D 111
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
++Q+LEA+ + H + ++H ++KPEN+LL S
Sbjct: 112 ASHCIQQILEAVLHCH-QMGVVHRNLKPENLLLAS 145
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 170
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 170
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 137 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 169
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDP-QDPNREKI 153
LG G F V + ++ VA+KI+ + + +IK + +Q + P+ K+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 154 VQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYL 212
Q++ T MV+E V G + + K + + + +Q+L A++Y
Sbjct: 77 YQVISTPT-------DFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYC 127
Query: 213 HNKCNIIHTDIKPENVLLGSN 233
H ++H D+KPENVLL ++
Sbjct: 128 HRHM-VVHRDLKPENVLLDAH 147
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 157 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 189
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 121 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 153
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 118 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 150
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 145 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 177
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 197
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 118 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 150
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 316
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + E F TY LL + N + + + + Q+ A
Sbjct: 317 LVQLL------GVCTREPPFYIITE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH ++ N L+G N H+ ++A
Sbjct: 370 MEYLEKK-NFIHRNLAARNCLVGEN--HLVKVA 399
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGS 232
+V+ + AL++LH K I H D+KPEN+L S
Sbjct: 116 VVRDVAAALDFLHTK-GIAHRDLKPENILCES 146
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 491 LSHKDKTCKEDNVPSYPRDNVNPAKDICHIDVKLA-DLGNAC--WRDKHFSRDIQTRQYR 547
++H+D K +N+ + V+P K IC D+ L N+C + + +Y
Sbjct: 132 IAHRD--LKPENILCESPEKVSPVK-ICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 548 SIEVL-----LRSGYDTSADIWSVACMAFELATGDYLFDPHTQN--GWTRNE 592
+ EV+ + YD D+WS+ + + + +G F H GW R E
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGE 240
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 183
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 170 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 202
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 182
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY +++ +G G+F L DK + VA+K ++ + E EI + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLRH 74
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLL 206
PN + +++ T H+ +V+E +L + N G + +QL+
Sbjct: 75 PNIVRFKEVILTPT-------HLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLI 125
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H + H D+K EN LL
Sbjct: 126 SGVSYCH-AMQVCHRDLKLENTLL 148
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 514 AKDICHIDVKLADL---GNACWRDK----HFSRD----------IQTRQYRSIEVLLRSG 556
A +CH D+KL + G+ R K +S+ + T Y + EVLL+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 557 YDTS-ADIWSVACMAFELATGDYLFD 581
YD AD+WS + + G Y F+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 182
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY +++ +G G+F L DK + VA+K ++ + E EI + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLRH 74
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLL 206
PN + +++ T H+ +V+E +L + N G + +QL+
Sbjct: 75 PNIVRFKEVILTPT-------HLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLI 125
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H + H D+K EN LL
Sbjct: 126 SGVSYCH-AMQVCHRDLKLENTLL 148
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 514 AKDICHIDVKLADL---GNACWRDK----HFSRD----------IQTRQYRSIEVLLRSG 556
A +CH D+KL + G+ R K +S+ + T Y + EVLL+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 557 YDTS-ADIWSVACMAFELATGDYLFD 581
YD AD+WS + + G Y F+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 183
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 183
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 197
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 182
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 94 KLGWGHFSTVW-LCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNREK 152
KLG G + V+ W K + VA+K +K E + E ++K ++ PN
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PN--- 274
Query: 153 IVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL----KSNNKGIPLYNVKCIVKQLLEA 208
+VQLL GV + E F TY LL + N + + + + Q+ A
Sbjct: 275 LVQLL------GVCTREPPFYIITE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 209 LEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
+EYL K N IH ++ N L+G N H+ ++A
Sbjct: 328 MEYLEKK-NFIHRNLAARNCLVGEN--HLVKVA 357
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 183
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
Q+LEA+ + HN C ++H DIK EN+L+ N +
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLNRGEL 197
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 514 AKDICHIDVKLADL---GNACWR----DKHFSRD----------IQTRQYRSIEVLLRSG 556
A +CH D+KL + G+ R D +S+ + T Y + EVLL+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 557 YDTS-ADIWSVACMAFELATGDYLFD 581
YD AD+WS + + G Y F+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFE 218
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY +++ +G G+F L DK + VA+K ++ + EI + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSLRH 74
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLL 206
PN + +++ T H+ +V+E +L + N G + +QL+
Sbjct: 75 PNIVRFKEVILTPT-------HLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLI 125
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H + H D+K EN LL
Sbjct: 126 SGVSYCH-AMQVCHRDLKLENTLL 148
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 179 FNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
N L + K +P V ++L +E +H+ C IIH DIKP+N +LG+
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD-CEIIHGDIKPDNFILGNG 208
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
RY +++ +G G+F L DK + VA+K ++ + E EI + +
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSLRH 73
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNVKCIVKQLL 206
PN + +++ T H+ +V+E +L + N G + +QL+
Sbjct: 74 PNIVRFKEVILTPT-------HLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLI 124
Query: 207 EALEYLHNKCNIIHTDIKPENVLL 230
+ Y H + H D+K EN LL
Sbjct: 125 SGVSYCH-AMQVCHRDLKLENTLL 147
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 514 AKDICHIDVKLADL---GNACWR----DKHFSRD----------IQTRQYRSIEVLLRSG 556
A +CH D+KL + G+ R D +S+ + T Y + EVLL+
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 557 YDTS-ADIWSVACMAFELATGDYLFD 581
YD AD+WS + + G Y F+
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDH 236
+++Q L +LH+ NI+H D+KP N+L+ N H
Sbjct: 123 LLQQTTSGLAHLHS-LNIVHRDLKPHNILISMPNAH 157
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 69
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 70 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 119
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 120 MLEAVHTIHQH-GIVHSDLKPANFLI 144
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 91 VIRKLGWGHFSTVWLC-WDK-IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
V +++G G F TV+ W +A + L + PQ + +E+ +L+ + +
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHVN---- 81
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ L ++ + + +V + EG + Y L S K + + I +Q
Sbjct: 82 -----ILLFMGYSTA----PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTAR 131
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
++YLH K +IIH D+K N+ L +N
Sbjct: 132 GMDYLHAK-SIIHRDLKSNNIFLHEDN 157
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I+K +L A+ Y H K N+ H D+KPEN L
Sbjct: 128 IMKDVLSAVAYCH-KLNVAHRDLKPENFLF 156
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALK--IMKSAPQ-YTETAIDEIKLLKCVQETD 144
+Y + K+G G F V+ + + VALK +M++ + + TA+ EIK+L+ ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-- 76
Query: 145 PQDPNREKIVQLLDNF-TISGVHGVHICMVLEVEGFNTYKL--LLKSNNKGIPLYNVKCI 201
E +V L++ T + + + V F + L LL + L +K +
Sbjct: 77 ------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
++ LL L Y+H + I+H D+K NVL+ D + +LA
Sbjct: 131 MQMLLNGLYYIH-RNKILHRDMKAANVLI--TRDGVLKLA 167
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y +++ +G G+F+ V L + + VA++I+ Q +++ E++++K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFREVRIMKVLNH-- 72
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN K+ ++++ + +V+E G + L+ + + +
Sbjct: 73 ---PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 120
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
Q++ A++Y H K I+H D+K EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y +++ +G G+F+ V L + + VA++I+ Q +++ E++++K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKT-QLNSSSLQKLFREVRIMKVLNH-- 72
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
PN K+ ++++ + +V+E G + L+ + + +
Sbjct: 73 ---PNIVKLFEVIETEKT-------LYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 120
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLL 230
Q++ A++Y H K I+H D+K EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K +K + I+E +++ ++ + P
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIKEGSMSEDDFIEEAEVM--MKLSHP-- 82
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 83 ----KLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 134
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL C +IH D+ N L+G N
Sbjct: 135 GMAYLEEAC-VIHRDLAARNCLVGENQ 160
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I+K +L A+ Y H K N+ H D+KPEN L
Sbjct: 111 IMKDVLSAVAYCH-KLNVAHRDLKPENFLF 139
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K ++ E I+E +++ ++ + P
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVM--MKLSHP-- 63
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 64 ----KLVQLYG----VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL C +IH D+ N L+G N
Sbjct: 116 GMAYLEEAC-VIHRDLAARNCLVGENQ 141
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDK----IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETD 144
Y +++++G G S V+ ++ A ++V L+ ++ Q ++ +EI L +Q+
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSYRNEIAYLNKLQQ-- 65
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQ 204
+ +KI++L D + I+ + I MV+E + L K K I + K K
Sbjct: 66 ----HSDKIIRLYD-YEITDQY---IYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKN 115
Query: 205 LLEALEYLHNKCNIIHTDIKPENVLL 230
+LEA+ +H I+H+D+KP N L+
Sbjct: 116 MLEAVHTIHQH-GIVHSDLKPANFLI 140
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK--SAPQYTETAIDEIKLLKCVQ 141
L+ + + +I+ +G G F V + K R A+KI+ + ETA C +
Sbjct: 87 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA--------CFR 138
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGV-----HICMVLEVE-GFNTYKLLLKSNNKGIPL 195
E R+ +V D I+ +H H+ +V++ G + LL K +K +P
Sbjct: 139 E------ERDVLVNG-DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPE 190
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
+ + +++ A++ +H + + +H DIKP+NVLL N HI L + LK N
Sbjct: 191 DMARFYIGEMVLAIDSIH-QLHYVHRDIKPDNVLLDVNG-HI---RLADFGSCLKMN 242
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 30/135 (22%)
Query: 119 IMKSAPQYTE----TAIDEIKLLKCVQETDPQDPNREKIVQLLD-----NFTISGVHGVH 169
+MK ++ E T + E+K+++C++ PN K + +L NF + G
Sbjct: 39 VMKELIRFDEETQRTFLKEVKVMRCLEH-----PNVLKFIGVLYKDKRLNFITEYIKG-- 91
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
T + ++KS + P K + + YLH+ NIIH D+ N L
Sbjct: 92 ----------GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCL 140
Query: 230 LGSNNDHI---FELA 241
+ N + + F LA
Sbjct: 141 VRENKNVVVADFGLA 155
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 198 VKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
+ ++ AL YLH+ NI++ D+KPEN+LL S HI
Sbjct: 141 ARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQG-HI 178
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 84 LYEQRYFVIRKLGWGHFSTVWLCWDKIATRFVALKIMK--SAPQYTETAIDEIKLLKCVQ 141
L+ + + +I+ +G G F V + K R A+KI+ + ETA C +
Sbjct: 71 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA--------CFR 122
Query: 142 ETDPQDPNREKIVQLLDNFTISGVHGV-----HICMVLEVE-GFNTYKLLLKSNNKGIPL 195
E R+ +V D I+ +H H+ +V++ G + LL K +K +P
Sbjct: 123 E------ERDVLVNG-DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPE 174
Query: 196 YNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
+ + +++ A++ +H + + +H DIKP+NVLL N HI L + LK N
Sbjct: 175 DMARFYIGEMVLAIDSIH-QLHYVHRDIKPDNVLLDVNG-HI---RLADFGSCLKMN 226
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALK--IMKSAPQ-YTETAIDEIKLLKCVQETD 144
+Y + K+G G F V+ + + VALK +M++ + + TA+ EIK+L+ ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-- 76
Query: 145 PQDPNREKIVQLLDNF-TISGVHGVHICMVLEVEGFNTYKL--LLKSNNKGIPLYNVKCI 201
E +V L++ T + + + V F + L LL + L +K +
Sbjct: 77 ------ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
++ LL L Y+H I+H D+K NVL+ D + +LA
Sbjct: 131 MQMLLNGLYYIHRN-KILHRDMKAANVLI--TRDGVLKLA 167
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 85 YEQRYF-VIRKLGWGHFSTVWLC-----WDKIATRFVALKIMKSAPQYTETAIDEIKLLK 138
+E+R+ +R+LG G+F +V +C D K+ S ++ EI++LK
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+Q + IV+ +G + +++E + + + L+ + + I +
Sbjct: 70 SLQH--------DNIVKYKGVCYSAGRRNLK--LIMEFLPYGSLREYLQKHKERIDHIKL 119
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
Q+ + +EYL K IH D+ N+L+ + N
Sbjct: 120 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENEN 154
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD- 147
Y V++ +G G F V L K + A+K++ + + IK + +D
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL--------SKFEMIKRSDSAFFWEERDI 127
Query: 148 ---PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
N +VQL F ++ MV+E + G + L+ +N +P +
Sbjct: 128 MAFANSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTA 180
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
+++ AL+ +H+ IH D+KP+N+LL D L L + +K N
Sbjct: 181 EVVLALDAIHS-MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMN 224
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 522 VKLADLGNACWRDK----HFSRDIQTRQYRSIEVLLRSG----YDTSADIWSVACMAFEL 573
+KLAD G +K + T Y S EVL G Y D WSV +E+
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 574 ATGDYLF 580
GD F
Sbjct: 272 LVGDTPF 278
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 519 HIDVKLADLGNACW--RDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
H ++++DLG A + + T Y + EV+ Y S D W++ C+ +E+ G
Sbjct: 322 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
Query: 577 DYLF 580
F
Sbjct: 382 QSPF 385
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 170 ICMVLEVEGFNTYKL-LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENV 228
+C+VL + K + G P ++ LE LH + I++ D+KPEN+
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENI 317
Query: 229 LLGSNNDHI 237
LL ++ HI
Sbjct: 318 LL-DDHGHI 325
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD- 147
Y V++ +G G F V L K + A+K++ + + IK + +D
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL--------SKFEMIKRSDSAFFWEERDI 122
Query: 148 ---PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
N +VQL F ++ MV+E + G + L+ +N +P +
Sbjct: 123 MAFANSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTA 175
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
+++ AL+ +H+ IH D+KP+N+LL D L L + +K N
Sbjct: 176 EVVLALDAIHS-MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMN 219
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 522 VKLADLGNACWRDK----HFSRDIQTRQYRSIEVLLRSG----YDTSADIWSVACMAFEL 573
+KLAD G +K + T Y S EVL G Y D WSV +E+
Sbjct: 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 574 ATGDYLF 580
GD F
Sbjct: 267 LVGDTPF 273
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 25 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 75
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 76 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 132 FIEER-NYIHRDLRAANILV 150
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I Q+ EA+E+LH+K ++H D+KP N+
Sbjct: 123 IFLQIAEAVEFLHSK-GLMHRDLKPSNIFF 151
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 27 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 77
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 78 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 134 FIEER-NYIHRDLRAANILV 152
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 519 HIDVKLADLGNACW--RDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATG 576
H ++++DLG A + + T Y + EV+ Y S D W++ C+ +E+ G
Sbjct: 322 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
Query: 577 DYLF 580
F
Sbjct: 382 QSPF 385
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 170 ICMVLEVEGFNTYKL-LLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENV 228
+C+VL + K + G P ++ LE LH + I++ D+KPEN+
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENI 317
Query: 229 LLGSNNDHI 237
LL ++ HI
Sbjct: 318 LL-DDHGHI 325
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 73
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 74 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 130 FIEER-NYIHRDLRAANILV 148
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 91 VIRKLGWGHFSTVWLC-WDK-IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
V +++G G F TV+ W +A + L + PQ + +E+ +L+ + +
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHVN---- 81
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ L ++ + +V + EG + Y L S K + + I +Q
Sbjct: 82 -----ILLFMGYSTK----PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTAR 131
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
++YLH K +IIH D+K N+ L +N
Sbjct: 132 GMDYLHAK-SIIHRDLKSNNIFLHEDN 157
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I Q+ EA+E+LH+K ++H D+KP N+
Sbjct: 169 IFIQIAEAVEFLHSK-GLMHRDLKPSNIFF 197
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 12 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQH-------- 62
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 63 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 119 FIEER-NYIHRDLRAANILV 137
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD- 147
Y V++ +G G F V L K + A+K++ + + IK + +D
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL--------SKFEMIKRSDSAFFWEERDI 127
Query: 148 ---PNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
N +VQL F ++ MV+E + G + L+ +N +P +
Sbjct: 128 MAFANSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTA 180
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
+++ AL+ +H+ IH D+KP+N+LL D L L + +K N
Sbjct: 181 EVVLALDAIHS-MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMN 224
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 522 VKLADLGNACWRDK----HFSRDIQTRQYRSIEVLLRSG----YDTSADIWSVACMAFEL 573
+KLAD G +K + T Y S EVL G Y D WSV +E+
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 574 ATGDYLF 580
GD F
Sbjct: 272 LVGDTPF 278
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 26 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 76
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 77 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 133 FIEER-NYIHRDLRAANILV 151
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAID----EIKLLKCVQETD 144
Y + LG G F V + ++ VA+KI+ + + EI+ LK +
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH-- 75
Query: 145 PQDPNREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVK 203
P+ K+ Q++ + I MV+E V G + + K N + + + +
Sbjct: 76 ---PHIIKLYQVISTPS-------DIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQ 123
Query: 204 QLLEALEYLHNKCNIIHTDIKPENVLLGSN 233
Q+L ++Y H ++H D+KPENVLL ++
Sbjct: 124 QILSGVDYCHRHM-VVHRDLKPENVLLDAH 152
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+++ + +L L LH + ++H D+ P N+LL NND
Sbjct: 135 HIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNND 172
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 197 NVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNND 235
+++ + +L L LH + ++H D+ P N+LL NND
Sbjct: 135 HIQYFMYHILLGLHVLH-EAGVVHRDLHPGNILLADNND 172
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 22 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 72
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 73 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 129 FIEER-NYIHRDLRAANILV 147
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 67
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 68 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 124 FIEER-NYIHRDLRAANILV 142
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALK--IMKSAPQ-YTETAIDEIKLLKCVQETD 144
+Y + K+G G F V+ + + VALK +M++ + + TA+ EIK+L+ ++
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-- 76
Query: 145 PQDPNREKIVQLLDNF-TISGVHGVHICMVLEVEGFNTYKL--LLKSNNKGIPLYNVKCI 201
E +V L++ T + + + V F + L LL + L +K +
Sbjct: 77 ------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
++ LL L Y+H I+H D+K NVL+ D + +LA
Sbjct: 131 MQMLLNGLYYIHRN-KILHRDMKAANVLI--TRDGVLKLA 167
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQ-DPN 149
+++ +G G FS V + K + A+KIM ++ E+ + +E D + +
Sbjct: 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN---KWDMLKRGEVSCFR--EERDVLVNGD 119
Query: 150 REKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEAL 209
R I QL +F + +++ M V G + LL K + IP + + +++ A+
Sbjct: 120 RRWITQL--HFAFQDENYLYLVMEYYVGG-DLLTLLSKFGER-IPAEMARFYLAEIVMAI 175
Query: 210 EYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLK 250
+ +H + +H DIKP+N+LL D + L + LK
Sbjct: 176 DSVH-RLGYVHRDIKPDNILL----DRCGHIRLADFGSCLK 211
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 88 RYFVIRKLGWGHFSTVWLCWDKIATRFVALK--IMKSAPQ-YTETAIDEIKLLKCVQETD 144
+Y + K+G G F V+ + + VALK +M++ + + TA+ EIK+L+ ++
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-- 75
Query: 145 PQDPNREKIVQLLDNF-TISGVHGVHICMVLEVEGFNTYKL--LLKSNNKGIPLYNVKCI 201
E +V L++ T + + + V F + L LL + L +K +
Sbjct: 76 ------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 202 VKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
++ LL L Y+H I+H D+K NVL+ D + +LA
Sbjct: 130 MQMLLNGLYYIHRN-KILHRDMKAANVLI--TRDGVLKLA 166
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 73
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 74 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 130 FIEER-NYIHRDLRAANILV 148
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 91 VIRKLGWGHFSTVWLC-WDK-IATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
V +++G G F TV+ W +A + L + PQ + +E+ +L+ + +
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHVN---- 69
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
+ L ++ + +V + EG + Y L S K + + I +Q
Sbjct: 70 -----ILLFMGYSTK----PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTAR 119
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
++YLH K +IIH D+K N+ L +N
Sbjct: 120 GMDYLHAK-SIIHRDLKSNNIFLHEDN 145
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 170 ICMVLE-VEGFNTYKLLLKSNNKGIPLYNVK-----CIVKQLLEALEYLHN--KCNIIHT 221
+C+V+E EG + Y +L + +P Y C+ Q + + YLH+ +IH
Sbjct: 75 VCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL--QCSQGVAYLHSMQPKALIHR 130
Query: 222 DIKPENVLLGSNN 234
D+KP N+LL +
Sbjct: 131 DLKPPNLLLVAGG 143
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLFD 581
+K+ D G AC H + + + + + EV S Y D++S + +E+ T FD
Sbjct: 146 LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 19 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 69
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 70 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 126 FIEER-NYIHRDLRAANILV 144
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 67
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 68 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 124 FIEER-NYIHRDLRAANILV 142
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 18 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 68
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 69 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 125 FIEER-NYIHRDLRAANILV 143
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--------H 67
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 68 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH D++ N+L+
Sbjct: 124 FIEER-NYIHRDLRAANILV 142
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 170 ICMVLE-VEGFNTYKLLLKSNNKGIPLYNVK-----CIVKQLLEALEYLHN--KCNIIHT 221
+C+V+E EG + Y +L + +P Y C+ Q + + YLH+ +IH
Sbjct: 74 VCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL--QCSQGVAYLHSMQPKALIHR 129
Query: 222 DIKPENVLLGSNN 234
D+KP N+LL +
Sbjct: 130 DLKPPNLLLVAGG 142
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 522 VKLADLGNACWRDKHFSRDIQTRQYRSIEVLLRSGYDTSADIWSVACMAFELATGDYLFD 581
+K+ D G AC H + + + + + EV S Y D++S + +E+ T FD
Sbjct: 145 LKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Ferritin H Ire Rna
pdb|3SNP|B Chain B, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Ferritin H Ire Rna
pdb|3SN2|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In
Complex With Transferrin Receptor Ire B Rna
Length = 908
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 191 KGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLK 250
KG L +K + L E+ E +H + N++ + P L G N D + + Y ++
Sbjct: 804 KGPFLLGIKAV---LAESYERIH-RSNLVGMGVIPLEYLPGENADSLGLTGRERYTIIIP 859
Query: 251 ENL-PLLHMRNIPSFIQKQLNSNSKDRKMVKYQKYVE 286
ENL P +H +Q +L++ + ++++ VE
Sbjct: 860 ENLTPRMH-------VQVKLDTGKTFQAVIRFDTDVE 889
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 33/153 (21%)
Query: 89 YFVIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDP 148
Y +++ +G G+F+ V L + + VA+KI+ +T ++ L K +E
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKII------DKTQLNSSSLQKLFREV----- 64
Query: 149 NREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKG-IPLYNV--------- 198
+I ++L++ I V + V+E E T L+ + + G + Y V
Sbjct: 65 ---RIXKVLNHPNI-----VKLFEVIETE--KTLYLVXEYASGGEVFDYLVAHGRXKEKE 114
Query: 199 -KCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +Q++ A++Y H K I+H D+K EN+LL
Sbjct: 115 ARAKFRQIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+C Q++ A+++ H++ ++H DIK EN+L+
Sbjct: 142 RCFFGQVVAAIQHCHSR-GVVHRDIKDENILI 172
>pdb|3SD4|A Chain A, Crystal Structure Of The First Tudor Domain Of Human Phf20
pdb|3SD4|B Chain B, Crystal Structure Of The First Tudor Domain Of Human Phf20
Length = 69
Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 67 ESKDYRVGGYHPVNIGDL-YEQRYFVIRKLGWGHFSTVWLCWD 108
E++D R+ ++P +I D+ YE+ +I W H W CWD
Sbjct: 20 EARD-RLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWD 61
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 92 IRKLGWGHFSTV----WLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQD 147
++++G G F V WL DK VA+K ++ E I+E +++ ++ + P
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVM--MKLSHP-- 62
Query: 148 PNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLE 207
K+VQL + IC+V E L++ + + + E
Sbjct: 63 ----KLVQLYG----VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 208 ALEYLHNKCNIIHTDIKPENVLLGSNN 234
+ YL + ++IH D+ N L+G N
Sbjct: 115 GMAYL-EEASVIHRDLAARNCLVGENQ 140
>pdb|3Q1J|A Chain A, Crystal Structure Of Tudor Domain 1 Of Human Phd Finger
Protein 20
Length = 66
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 67 ESKDYRVGGYHPVNIGDL-YEQRYFVIRKLGWGHFSTVWLCWD 108
E++D R+ ++P +I D+ YE+ +I W H W CWD
Sbjct: 17 EARD-RLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWD 58
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
+ +Q+ + ++Y+H+K +IH D+KP N+ L
Sbjct: 141 LFEQITKGVDYIHSK-KLIHRDLKPSNIFL 169
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 208 ALEYLHNKCN--IIHTDIKPENVLLGSNNDHIFELALKTYN 246
L YLH+ C+ IIH D+K N+LL D FE + +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFG 179
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 540 DIQTRQYRSIEVLLRS--GYDTSADIWSVACMAFELATGDYLFD--PHTQ 585
++ + S EVL ++ GYD +DI+SV A ELA G F P TQ
Sbjct: 179 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 228
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 540 DIQTRQYRSIEVLLRS--GYDTSADIWSVACMAFELATGDYLFD--PHTQ 585
++ + S EVL ++ GYD +DI+SV A ELA G F P TQ
Sbjct: 195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 145
Query: 230 LGSNN 234
+ SN+
Sbjct: 146 VSSND 150
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 146
Query: 230 LGSNN 234
+ SN+
Sbjct: 147 VSSND 151
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 208 ALEYLHNKCN--IIHTDIKPENVLLGSNNDHIFELALKTYN 246
L YLH+ C+ IIH D+K N+LL D FE + +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFG 187
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 148
Query: 230 LGSNN 234
+ SN+
Sbjct: 149 VSSND 153
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 140
Query: 230 LGSNN 234
+ SN+
Sbjct: 141 VSSND 145
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 143
Query: 230 LGSNN 234
+ SN+
Sbjct: 144 VSSND 148
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 143
Query: 230 LGSNN 234
+ SN+
Sbjct: 144 VSSND 148
>pdb|2H09|A Chain A, Crystal Structure Of Diphtheria Toxin Repressor Like
Protein From E. Coli
Length = 155
Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 299 LNRKDGEGTAKETNQIK--DERNEKSAEVKEEHPREVIVQVDDLVKDNETETSEEKR 353
++R+ G TAK+ Q+ +E E +V+E H RE+I +L+ D E E ++
Sbjct: 1 MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQ 57
>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
Length = 1263
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 355 LELINNHIDENNQSKDINVLFPNVVGEDKMNIFSDSDGSYVVMRVEANRPTL--KDSDTL 412
LEL+NN I ++ V ++K I S D V + ++ +T+
Sbjct: 994 LELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETV 1053
Query: 413 EPFKL-KDTDQLKYN-DGKLEA--DLEELLNKDLPFHANTNIICNTSRSASKMQRRNSST 468
+ F+L K++ L ++ DG ++ + KD H T + C+ S A+K ++
Sbjct: 1054 KDFRLLKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADK 1113
Query: 469 PSKMWS 474
+K+WS
Sbjct: 1114 TAKIWS 1119
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 113 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 171
Query: 230 LGSNN 234
+ SN+
Sbjct: 172 VSSND 176
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 523
Query: 230 LGSNN 234
+ SN+
Sbjct: 524 VSSND 528
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 170 ICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVL 229
+ +++E+ + L+ + L ++ QL AL YL +K +H DI NVL
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVL 143
Query: 230 LGSNN 234
+ SN+
Sbjct: 144 VSSND 148
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 91 VIRKLGWGHFSTVWLCWDKIATRFVALKIMKSAPQYTETAIDEIKLLKCVQETDPQDPNR 150
++ +LG G F VW+ + T+ VA+K +K + + E L+K +Q
Sbjct: 13 LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQH-------- 63
Query: 151 EKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEALE 210
+++V+L T ++ + M E + L + + + + + Q+ E +
Sbjct: 64 QRLVRLYAVVTQEPIYIITEYM----ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 211 YLHNKCNIIHTDIKPENVLL 230
++ + N IH +++ N+L+
Sbjct: 120 FIEER-NYIHRNLRAANILV 138
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 137 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 165
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 137 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 165
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 136 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 164
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 129 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 157
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 95 LGWGHFSTVWLCWDKIATRFVALKIM-----KSAPQYTETAIDEIKLLKCVQETDPQDPN 149
+G G F+ V L + VA+KIM S +T I+ +K L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR----------- 66
Query: 150 REKIVQLLDNFTISGVHGVHICMVLE-VEGFNTYKLLLKSNNKGIPLYNVKCIVKQLLEA 208
+ I QL + I MVLE G + ++ + + + + +Q++ A
Sbjct: 67 HQHICQLYHVLETAN----KIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSA 120
Query: 209 LEYLHNKCNIIHTDIKPENVLL 230
+ Y+H++ H D+KPEN+L
Sbjct: 121 VAYVHSQ-GYAHRDLKPENLLF 141
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELALKTYNQVLKEN 252
I +++++ + YLH K I+H D+K +NV + I + L + + VL+
Sbjct: 135 IAQEIVKGMGYLHAK-GILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAG 185
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 114 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 142
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 114 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 142
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 36/168 (21%)
Query: 93 RKLGWGHF-----STVWLCWDKIATRFVALKIMKSAPQY--TETAIDEIKLLKCVQETDP 145
+ LG G F +T + + A VA+K++KS E + E+K++ + +
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ--- 108
Query: 146 QDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLL------------KSNNKGI 193
E IV LL T HG + ++ E + Y LL K + + +
Sbjct: 109 ----HENIVNLLGACT----HGGPVLVITE---YCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 194 PLYNVKCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHIFELA 241
L ++ Q+ + + +L +K N IH D+ NVLL N H+ ++
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLL--TNGHVAKIG 202
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 111 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 139
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 109 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNNDHI 237
+ Q+LEA+ + HN ++H DIK EN+L+ N +
Sbjct: 113 RSFFWQVLEAVRHCHNX-GVLHRDIKDENILIDLNRGEL 150
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 109 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 201 IVKQLLEALEYLHNKCNIIHTDIKPENVLL 230
I +Q + ++YLH K +IIH D+K N+ L
Sbjct: 109 IARQTAQGMDYLHAK-SIIHRDLKSNNIFL 137
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 85 YEQRYF-VIRKLGWGHFSTVWLC-----WDKIATRFVALKIMKSAPQYTETAIDEIKLLK 138
+E+R+ +++LG G+F +V +C D K+ S ++ EI++LK
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+Q + IV+ +G ++ +++E + + + L+ + + I +
Sbjct: 85 SLQH--------DNIVKYKGVCYSAGRR--NLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
Q+ + +EYL K IH D+ N+L+ + N
Sbjct: 135 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENEN 169
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 85 YEQRYF-VIRKLGWGHFSTVWLC-----WDKIATRFVALKIMKSAPQYTETAIDEIKLLK 138
+E+R+ +++LG G+F +V +C D K+ S ++ EI++LK
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 139 CVQETDPQDPNREKIVQLLDNFTISGVHGVHICMVLEVEGFNTYKLLLKSNNKGIPLYNV 198
+Q + IV+ +G + +++E + + + L+ + + I +
Sbjct: 85 SLQH--------DNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 199 KCIVKQLLEALEYLHNKCNIIHTDIKPENVLLGSNN 234
Q+ + +EYL K IH D+ N+L+ + N
Sbjct: 135 LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENEN 169
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 31/141 (21%)
Query: 115 VALKIMKSAPQY--TETAIDEIKLLKCVQETDPQDPNREKIVQLLDNFTISGVHGVHICM 172
VA+K++KS E + E+K++ + + E IV LL T HG + +
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-------HENIVNLLGACT----HGGPVLV 119
Query: 173 VLEVEGFNTYKLLL------------KSNNKGIPLYNVKCIVKQLLEALEYLHNKCNIIH 220
+ E + Y LL K + + + L ++ Q+ + + +L +K N IH
Sbjct: 120 ITE---YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIH 175
Query: 221 TDIKPENVLLGSNNDHIFELA 241
D+ NVLL N H+ ++
Sbjct: 176 RDVAARNVLL--TNGHVAKIG 194
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 9/33 (27%)
Query: 207 EALEYLHNKC---------NIIHTDIKPENVLL 230
EA+EY+ C N +H D+KPEN++
Sbjct: 150 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 182
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 9/33 (27%)
Query: 207 EALEYLHNKC---------NIIHTDIKPENVLL 230
EA+EY+ C N +H D+KPEN++
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 288
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,106,092
Number of Sequences: 62578
Number of extensions: 844369
Number of successful extensions: 4230
Number of sequences better than 100.0: 836
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 490
Number of HSP's that attempted gapping in prelim test: 2792
Number of HSP's gapped (non-prelim): 1442
length of query: 612
length of database: 14,973,337
effective HSP length: 105
effective length of query: 507
effective length of database: 8,402,647
effective search space: 4260142029
effective search space used: 4260142029
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)