BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13761
(402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9PTG8|TACC3_XENLA Transforming acidic coiled-coil-containing protein 3 OS=Xenopus
laevis GN=tacc3 PE=1 SV=2
Length = 931
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 55/320 (17%)
Query: 120 ESELRKQSLYVQFDPFLK-SPVRQKPSIKSPPTQSI--------------------MEEE 158
ES LRKQSLY++FDP L+ SP + I P+ + +E E
Sbjct: 619 ESVLRKQSLYLKFDPLLRESPKKSAAGINLLPSVPLKCSSDLFGAIPEANFPLIPSIENE 678
Query: 159 SLNDSAKLLGTSELNESVNSLSIKENESLNGNCATSTPSGTAHTANLISPERNSTSDEKD 218
LLGT + ++ +L I ++ + + P+ T++ I + + D
Sbjct: 679 EKPKGLDLLGTFTVADT--ALLI-----VDAPSSVAVPNPFLSTSDAIVEMLKYSQKDMD 731
Query: 219 KLI---------------------EKLKKENASYQKMLNDYENTITQCVNQRENDKKQFE 257
I EKL E K++ ++E TITQ + E+ ++Q E
Sbjct: 732 AAIEAVRLEVQEKDLEVLEWKTKHEKLYLEYVEMGKIIAEFEGTITQIL---EDSQRQKE 788
Query: 258 KYKKELEK---EKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEE 314
K EL K EK++VQ+ L + E +F+++ + E+ K +EG + NE+ L+ +
Sbjct: 789 TAKLELNKVLQEKQQVQVDLNSMETSFSELFKRLEKQKEALEGYRKNEEALKKCVEDYLV 848
Query: 315 ELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLA 374
+KK+ +Y ALK HA +L +AN+++ + E T L+A L+K +M+I SL+ SL
Sbjct: 849 RIKKEEQRYQALKAHAEEKLNRANEEIAHVRSKAKSEATALQATLRKEQMKIQSLERSLE 908
Query: 375 RKTEENAELTSICDDLISKL 394
+K++EN ELT ICDD I K+
Sbjct: 909 QKSKENDELTKICDDFILKM 928
>sp|Q9JJ11|TACC3_MOUSE Transforming acidic coiled-coil-containing protein 3 OS=Mus
musculus GN=Tacc3 PE=1 SV=1
Length = 631
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 168/337 (49%), Gaps = 40/337 (11%)
Query: 83 VNLMEDENLNKSEAGPNTAELSK-EDFQTGDECKAPISESELRKQSLYVQFDPFLK-SPV 140
V+L E+ + SE AE+ E F T ES RKQSLYV+FDP LK SP+
Sbjct: 307 VDLKEESFRDPSEVLGTGAEVDYLEQFGTSS-----FKESAWRKQSLYVKFDPLLKDSPL 361
Query: 141 RQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLSIKENESLNGNCATSTPSGTA 200
R P +P T S + E + S K +N ++ L L+ + TP +
Sbjct: 362 RPMPV--APITNSTQDTEEESGSGKPTEAELVN--LDFLG-----DLDVPVSAPTPVWSL 412
Query: 201 HTANLISPER----------------NSTSDEKDKLIEKLKKENASYQKM---LNDYEN- 240
L+ E N E +L K + N Y +M ++++E
Sbjct: 413 EPRGLLPAEPIVDVLKYSQKDLDAVVNVMQQENLELKSKYEDLNTKYLEMGKSVDEFEKI 472
Query: 241 ---TITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEG 297
++ + QRE + +K +K L KE++++ L + E +F+D+ ++E+ K +IEG
Sbjct: 473 AYKSLEEAEKQRELKEIAEDKIQKVL-KERDQLNADLNSMEKSFSDLFKRFEKRKEVIEG 531
Query: 298 MKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKA 357
+ NE+ L+ E +++K+ +Y ALK HA +L AN+++ + + E L+A
Sbjct: 532 YQKNEESLKKYVGECIVKIEKEGQRYQALKIHAEEKLRLANEEIAQVHSKAQAEVLALQA 591
Query: 358 MLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
L+K++MQ SL+ +L +KT+E ELT ICDDLISK+
Sbjct: 592 SLRKAQMQNHSLEMTLEQKTKEIDELTRICDDLISKM 628
>sp|O75410|TACC1_HUMAN Transforming acidic coiled-coil-containing protein 1 OS=Homo
sapiens GN=TACC1 PE=1 SV=2
Length = 805
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 105/182 (57%)
Query: 214 SDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLH 273
++E K E+ ++E +K++ +YE TI Q + + +K ++L EKE+
Sbjct: 621 ANEWKKKYEETRQEVLEMRKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALAD 680
Query: 274 LRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQ 333
L + E + +D+ +YE K ++EG K NE+ L+ + +K++ +Y ALK HA +
Sbjct: 681 LNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEK 740
Query: 334 LEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISK 393
L+KAN+++ + E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+K
Sbjct: 741 LDKANEEIAQVRTKAKAESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAK 800
Query: 394 LS 395
L
Sbjct: 801 LG 802
>sp|Q6Y685|TACC1_MOUSE Transforming acidic coiled-coil-containing protein 1 OS=Mus
musculus GN=Tacc1 PE=1 SV=1
Length = 774
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 105/182 (57%)
Query: 214 SDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLH 273
++E K E+ ++E +K++ +YE TI Q + + +K ++L EKE+
Sbjct: 590 ANEWKKKYEETREEVLEMRKIVAEYEKTIAQMIEDEQRTSMSSQKSFQQLTMEKEQALAD 649
Query: 274 LRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQ 333
L + E + +D+ +YE K ++EG K NE+ L+ + +K++ +Y ALK HA +
Sbjct: 650 LNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHAEEK 709
Query: 334 LEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISK 393
L++AN+++ + E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+K
Sbjct: 710 LDRANEEIAQVRSKAKAESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAK 769
Query: 394 LS 395
L
Sbjct: 770 LG 771
>sp|Q9Y6A5|TACC3_HUMAN Transforming acidic coiled-coil-containing protein 3 OS=Homo
sapiens GN=TACC3 PE=1 SV=1
Length = 838
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 221 IEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEK---EKEEVQLHLRNS 277
E+L +N K+++ +E + Q + E +KQ E K E++K EK+++ L +
Sbjct: 662 CEELHGKNLELGKIMDRFEEVVYQAM---EEVQKQKELSKAEIQKVLKEKDQLTTDLNSM 718
Query: 278 EIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKA 337
E +F+D+ ++E+ K +IEG + NE+ L+ + + ++ +Y ALK HA +L+ A
Sbjct: 719 EKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEGQRYQALKAHAEEKLQLA 778
Query: 338 NQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
N+++ + E L+A L+K +M+I SL++++ +KT+EN ELT ICDDLISK+
Sbjct: 779 NEEIAQVRSKAQAEALALQASLRKEQMRIQSLEKTVEQKTKENEELTRICDDLISKM 835
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 120 ESELRKQSLYVQFDPFLK-SPVRQKP 144
ES LRKQSLY++FDP L+ SP R P
Sbjct: 551 ESALRKQSLYLKFDPLLRDSPGRPVP 576
>sp|O95359|TACC2_HUMAN Transforming acidic coiled-coil-containing protein 2 OS=Homo sapiens
GN=TACC2 PE=1 SV=3
Length = 2948
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 203 ANLISPERNSTSDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKE 262
A +I+ ER S+ KDK E+ ++E +K++ +YE TI Q + + +K + ++
Sbjct: 2756 AEIITKERE-VSEWKDKY-EESRREVMEMRKIVAEYEKTIAQMIEDEQREKSVSHQTVQQ 2813
Query: 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNK 322
L EKE+ L + E + D+ +YE+ K ++EG + NE+ L+ E +KK+ +
Sbjct: 2814 LVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKNEEVLKRCAQEYLSRVKKEEQR 2873
Query: 323 YDALKTHAISQLEKANQDL-DLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENA 381
Y ALK HA +L++AN ++ +R K + + + L+K ++++ +L+ +L +K +E
Sbjct: 2874 YQALKVHAEEKLDRANAEIAQVRGKAQQEQAAHQAS-LRKEQLRVDALERTLEQKNKEIE 2932
Query: 382 ELTSICDDLISKLS 395
ELT ICD+LI+K+
Sbjct: 2933 ELTKICDELIAKMG 2946
>sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing protein 2 OS=Mus musculus
GN=Tacc2 PE=1 SV=2
Length = 1149
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 112/194 (57%), Gaps = 5/194 (2%)
Query: 203 ANLISPERNSTSDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKE 262
A +I+ ER S+ +DK E+ ++E +K++ +YE TI Q + E K + ++
Sbjct: 958 AEVIAKERE-VSEWRDKY-EESRREVVEMRKIVAEYEKTIAQMIPGTER-KILSHQTVQQ 1014
Query: 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNK 322
L EKE+ L + E + D+ +YE+ K ++EG + NE+ L+ E +KK+ +
Sbjct: 1015 LVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKNEEVLKKCAQEYLSRVKKEEQR 1074
Query: 323 YDALKTHAISQLEKANQDL-DLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENA 381
Y ALK HA +L++AN ++ +R K + + + L+K ++++ +L+ +L +K +E
Sbjct: 1075 YQALKVHAEEKLDRANAEIAQVRGKAQQEQAAYQAS-LRKEQLRVDALERTLEQKNKEIE 1133
Query: 382 ELTSICDDLISKLS 395
ELT ICD+LI+K+
Sbjct: 1134 ELTKICDELIAKMG 1147
>sp|Q5M9N0|CD158_HUMAN Coiled-coil domain-containing protein 158 OS=Homo sapiens
GN=CCDC158 PE=1 SV=2
Length = 1113
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 197 SGTAHTANLISPERNSTSDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQF 256
+G A+ + NS + + + E+ + +N+ Y + L+D E+T++Q ++ K+ +
Sbjct: 281 TGLTEKASSARSQANSIQSQMEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMY 340
Query: 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANED--------HLRAR 308
E +ELEK QL L NSE+ + ER + E ++ H R +
Sbjct: 341 EDKTEELEK-----QLVLANSEL----TEARTERDQFSQESGNLDDQLQKLLADLHKREK 391
Query: 309 HSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLK--KSEMQ 365
LE+E K++ D + I L + +LD RN ME +L+A+LK KSE Q
Sbjct: 392 ELSLEKEQNKRLWDRDTGNSITIDHLRR---ELDNRN----MEVQRLEALLKALKSECQ 443
>sp|Q8CDI6|CD158_MOUSE Coiled-coil domain-containing protein 158 OS=Mus musculus
GN=Ccdc158 PE=2 SV=1
Length = 1109
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 197 SGTAHTANLISPERNSTSDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQF 256
+G A+ + NS + + + E+ + +N+ Y + L+D E+T++Q ++ K+ +
Sbjct: 280 TGLTEKASSARSQANSVQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELRESKRMY 339
Query: 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANED--------HLRAR 308
E +ELEK QL L NSE+ + ER + E ++ H R +
Sbjct: 340 EDKIEELEK-----QLVLANSEL----TEARTERDQFSQESGNLDDQLQKLLADLHKREK 390
Query: 309 HSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLK--KSEMQ 365
LE+E K++ D + I L + +LD RN ME +L+A+LK KSE Q
Sbjct: 391 ELSLEKEQNKRLWDRDTGNSITIDHLRR---ELDDRN----MEVQRLEALLKAMKSECQ 442
>sp|Q2KN99|CYTSA_RAT Cytospin-A OS=Rattus norvegicus GN=Specc1l PE=2 SV=1
Length = 1118
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 218 DKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEV----QLH 273
+++IE +K A+ L +Y+ T+ +D+ + + K +LEKEK++V +H
Sbjct: 546 ERIIESEQKGKAALAATLEEYKATVA-------SDQIEMNRLKAQLEKEKQKVAELYSIH 598
Query: 274 LRNSEIAFND----VHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTH 329
+ D V L E+++ + ++ + H R + L++ + K ++Y A +
Sbjct: 599 NSGDKSDIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQEE 658
Query: 330 AISQLEKANQDLD-LRNKTYEMET 352
A Q+E N L+ LR++ E ET
Sbjct: 659 AKKQIEDLNMTLEKLRSELEEKET 682
>sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4 OS=Arabidopsis
thaliana GN=SMC4 PE=2 SV=1
Length = 1241
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 222 EKLKKENASYQKMLNDYE--NT-ITQCVNQRENDKKQFEKYKKELE---KEKEEVQLHLR 275
EKLK + A +K+ D + NT I +C Q E ++K +K K +E +EKE ++
Sbjct: 839 EKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKGIEEATREKERLEGEKE 898
Query: 276 NSEIAFNDVHLK-------YERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKT 328
N + F D+ K Y++++ +I+ K D L S+ E LKK V++ A +
Sbjct: 899 NLHVTFKDITQKAFEIQETYKKTQQLIDEHK---DVLTGAKSDY-ENLKKSVDELKASRV 954
Query: 329 HA---ISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQI 366
A + ++K +L++R K Y+ + L+ K QI
Sbjct: 955 DAEFKVQDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQI 995
>sp|P29616|MYSC_CHICK Myosin heavy chain, cardiac muscle isoform (Fragment) OS=Gallus
gallus PE=1 SV=1
Length = 1102
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 13/76 (17%)
Query: 221 IEKLKKENASYQKMLNDYENTITQCVNQRENDK--KQFEKYKKELEKEKEEVQLHLRNSE 278
+E LK+EN + Q+ ++D N I+ E +K + EK KK++E+EK EVQL L +E
Sbjct: 661 LETLKRENKNLQEEISDLTNQIS------EGNKNLHEIEKVKKQVEQEKSEVQLALEEAE 714
Query: 279 IAFNDVHLKYERSKVI 294
A L++E SK +
Sbjct: 715 GA-----LEHEESKTL 725
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.123 0.321
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,853,034
Number of Sequences: 539616
Number of extensions: 6057262
Number of successful extensions: 36654
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 2541
Number of HSP's that attempted gapping in prelim test: 28460
Number of HSP's gapped (non-prelim): 7403
length of query: 402
length of database: 191,569,459
effective HSP length: 120
effective length of query: 282
effective length of database: 126,815,539
effective search space: 35761981998
effective search space used: 35761981998
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 62 (28.5 bits)