Query psy13761
Match_columns 402
No_of_seqs 97 out of 115
Neff 3.2
Searched_HMMs 29240
Date Fri Aug 16 19:50:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13761.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13761hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ol1_A Vimentin; structural ge 97.4 0.0052 1.8E-07 52.1 15.1 107 231-359 11-117 (119)
2 1c1g_A Tropomyosin; contractIl 97.3 0.073 2.5E-06 45.4 26.8 63 263-325 137-199 (284)
3 3na7_A HP0958; flagellar bioge 97.0 0.09 3.1E-06 48.8 19.5 42 255-296 43-84 (256)
4 1c1g_A Tropomyosin; contractIl 97.0 0.15 5E-06 43.5 27.1 23 222-244 23-45 (284)
5 3oja_B Anopheles plasmodium-re 96.1 0.13 4.6E-06 51.1 15.6 115 257-382 462-576 (597)
6 3ghg_A Fibrinogen alpha chain; 95.1 0.39 1.3E-05 50.4 14.7 111 230-379 50-160 (562)
7 3vkg_A Dynein heavy chain, cyt 94.8 2.3 7.8E-05 52.5 22.2 84 305-388 1974-2066(3245)
8 3na7_A HP0958; flagellar bioge 94.3 3.3 0.00011 38.2 19.8 87 296-392 100-186 (256)
9 2v71_A Nuclear distribution pr 94.3 3.3 0.00011 38.1 20.7 130 216-391 14-143 (189)
10 3vkg_A Dynein heavy chain, cyt 93.9 3.8 0.00013 50.7 21.4 45 351-395 2022-2066(3245)
11 2dfs_A Myosin-5A; myosin-V, in 93.8 2.6 8.9E-05 46.9 18.6 79 263-345 958-1036(1080)
12 2v71_A Nuclear distribution pr 92.5 6.4 0.00022 36.2 21.2 63 215-277 20-82 (189)
13 3ghg_A Fibrinogen alpha chain; 92.4 0.53 1.8E-05 49.4 9.8 49 273-321 103-152 (562)
14 2dfs_A Myosin-5A; myosin-V, in 92.2 5.8 0.0002 44.2 18.4 13 311-323 988-1000(1080)
15 3swk_A Vimentin; cytoskeleton, 92.2 2.4 8.1E-05 34.2 11.5 83 255-348 4-86 (86)
16 1deq_A Fibrinogen (alpha chain 90.4 6 0.0002 40.1 14.7 102 230-367 53-158 (390)
17 2b5u_A Colicin E3; high resolu 89.7 22 0.00076 37.3 18.8 59 261-319 317-375 (551)
18 2eqb_B RAB guanine nucleotide 88.6 9.8 0.00034 31.9 13.5 52 324-375 39-94 (97)
19 3tnu_A Keratin, type I cytoske 88.0 8.1 0.00028 32.7 11.9 35 256-290 43-77 (131)
20 3tnu_B Keratin, type II cytosk 87.5 12 0.00041 31.5 12.9 35 256-290 41-75 (129)
21 2efl_A Formin-binding protein 86.4 18 0.00063 32.5 22.6 61 236-296 101-161 (305)
22 2v66_B Nuclear distribution pr 86.2 15 0.00051 31.3 14.1 76 304-383 7-82 (111)
23 3oja_A Leucine-rich immune mol 85.9 19 0.00066 35.1 14.9 44 305-348 429-472 (487)
24 2no2_A HIP-I, huntingtin-inter 85.9 14 0.00049 30.8 12.9 76 306-392 21-96 (107)
25 1m1j_A Fibrinogen alpha subuni 85.6 28 0.00096 36.2 16.3 29 350-378 132-160 (491)
26 3mq9_A Bone marrow stromal ant 85.0 25 0.00086 34.1 15.2 18 330-347 402-419 (471)
27 3i00_A HIP-I, huntingtin-inter 84.8 8.4 0.00029 33.0 10.3 78 229-328 36-113 (120)
28 1m1j_B Fibrinogen beta chain; 83.2 41 0.0014 34.6 16.4 33 345-377 163-195 (464)
29 3o0z_A RHO-associated protein 82.9 27 0.00093 31.7 20.5 110 215-324 16-135 (168)
30 2efk_A CDC42-interacting prote 82.9 27 0.00092 31.6 22.8 62 236-297 94-155 (301)
31 3tnu_B Keratin, type II cytosk 82.2 21 0.00073 29.9 11.8 93 257-349 14-106 (129)
32 3etw_A Adhesin A; antiparallel 81.8 16 0.00056 31.4 10.9 63 305-369 39-101 (119)
33 3tnu_A Keratin, type I cytoske 81.2 17 0.00059 30.6 10.9 93 257-349 16-108 (131)
34 2eqb_B RAB guanine nucleotide 81.0 8.2 0.00028 32.3 8.5 36 350-385 26-61 (97)
35 1m1j_A Fibrinogen alpha subuni 79.6 29 0.00098 36.2 13.6 90 215-321 61-153 (491)
36 3iv1_A Tumor susceptibility ge 79.1 12 0.0004 30.3 8.6 63 325-387 11-76 (78)
37 3oja_A Leucine-rich immune mol 78.6 18 0.00063 35.2 11.7 14 269-282 371-384 (487)
38 2fxo_A Myosin heavy chain, car 76.8 33 0.0011 28.9 17.8 65 250-321 33-97 (129)
39 3haj_A Human pacsin2 F-BAR; pa 76.7 64 0.0022 32.2 20.5 11 383-393 263-273 (486)
40 1deq_A Fibrinogen (alpha chain 76.3 29 0.001 35.2 12.4 52 215-266 63-117 (390)
41 1m1j_B Fibrinogen beta chain; 75.1 80 0.0027 32.5 16.4 28 357-384 168-195 (464)
42 3ajw_A Flagellar FLIJ protein; 74.5 34 0.0012 28.0 12.8 46 243-288 11-56 (150)
43 3iv1_A Tumor susceptibility ge 74.5 27 0.00091 28.2 9.5 58 263-320 16-73 (78)
44 3haj_A Human pacsin2 F-BAR; pa 73.9 75 0.0026 31.7 22.1 28 331-358 191-218 (486)
45 2j1d_G DAAM1, disheveled-assoc 72.0 75 0.0026 32.0 14.4 62 332-398 386-449 (483)
46 3uzd_A 14-3-3 protein gamma; s 71.5 4.2 0.00015 38.6 4.9 81 312-396 9-106 (248)
47 2o8p_A 14-3-3 domain containin 71.0 10 0.00036 35.6 7.3 78 311-396 10-110 (227)
48 2oto_A M protein; helical coil 70.1 52 0.0018 28.2 20.4 58 223-284 26-83 (155)
49 2oto_A M protein; helical coil 70.0 53 0.0018 28.2 18.8 42 258-299 29-70 (155)
50 3pdy_A Plectin; cytoskeleton, 69.3 58 0.002 28.5 15.4 81 312-393 79-174 (210)
51 3hnw_A Uncharacterized protein 67.2 52 0.0018 28.4 10.5 38 349-386 88-125 (138)
52 3s4r_A Vimentin; alpha-helix, 66.6 50 0.0017 26.7 12.4 77 304-383 13-89 (93)
53 3mq9_A Bone marrow stromal ant 66.5 97 0.0033 30.0 15.7 7 277-283 409-415 (471)
54 3o0z_A RHO-associated protein 65.9 78 0.0027 28.7 18.0 80 261-347 30-112 (168)
55 3ubw_A 14-3-3E, 14-3-3 protein 65.4 8.2 0.00028 37.1 5.5 85 312-396 36-133 (261)
56 2no2_A HIP-I, huntingtin-inter 64.7 61 0.0021 27.0 14.7 33 351-383 69-101 (107)
57 2ap3_A Conserved hypothetical 64.6 89 0.003 28.9 15.5 69 289-357 113-187 (199)
58 1l8d_A DNA double-strand break 63.8 54 0.0019 26.1 11.5 35 346-380 67-101 (112)
59 2npm_A 14-3-3 domain containin 63.0 25 0.00085 33.6 8.3 84 312-396 33-133 (260)
60 2odv_A Plectin 1, HD1; plakin 62.5 97 0.0033 28.6 18.0 115 264-391 65-192 (235)
61 1g8x_A Myosin II heavy chain f 62.4 2E+02 0.0067 32.1 17.3 38 351-392 917-955 (1010)
62 3iox_A AGI/II, PA; alpha helix 62.0 1.6E+02 0.0054 30.8 15.8 83 267-363 11-93 (497)
63 3hnw_A Uncharacterized protein 61.2 81 0.0028 27.2 10.7 62 259-320 69-130 (138)
64 4hpq_C ATG17, KLTH0D15642P; au 60.9 1.4E+02 0.005 30.1 19.2 31 216-246 232-262 (413)
65 2fxo_A Myosin heavy chain, car 60.2 76 0.0026 26.6 16.6 102 217-318 18-122 (129)
66 3u59_A Tropomyosin beta chain; 59.5 68 0.0023 25.9 14.4 35 259-293 10-44 (101)
67 3nmd_A CGMP dependent protein 58.8 26 0.00088 28.0 6.4 35 356-390 32-66 (72)
68 2fic_A Bridging integrator 1; 57.8 1E+02 0.0035 27.4 20.7 29 329-357 183-211 (251)
69 3i00_A HIP-I, huntingtin-inter 57.8 88 0.003 26.6 10.0 19 215-233 11-29 (120)
70 2j69_A Bacterial dynamin-like 57.7 1.9E+02 0.0064 30.3 19.3 35 319-353 452-486 (695)
71 1f5n_A Interferon-induced guan 57.0 1.9E+02 0.0065 30.2 19.0 94 291-384 457-561 (592)
72 2w83_C C-JUN-amino-terminal ki 56.8 67 0.0023 26.0 8.5 36 258-293 9-44 (77)
73 1x8y_A Lamin A/C; structural p 56.6 52 0.0018 26.1 7.9 43 305-347 15-57 (86)
74 3iqu_A 14-3-3 protein sigma; s 56.5 16 0.00055 34.4 5.7 83 312-396 13-110 (236)
75 2e7s_A RAB guanine nucleotide 56.4 46 0.0016 29.3 8.2 26 326-351 61-86 (135)
76 1ykh_B RNA polymerase II holoe 56.2 20 0.00068 30.7 5.8 41 356-396 91-131 (132)
77 1wle_A Seryl-tRNA synthetase; 55.8 1.8E+02 0.0063 29.8 13.8 50 333-382 92-148 (501)
78 2avr_X Adhesion A; antiparalle 55.1 1E+02 0.0035 26.6 10.9 25 340-364 72-96 (119)
79 3lbx_A Spectrin alpha chain, e 54.6 98 0.0034 26.2 12.0 56 276-339 26-81 (161)
80 3r6n_A Desmoplakin; spectrin r 54.2 1.9E+02 0.0064 29.2 15.1 29 365-393 134-162 (450)
81 4dyl_A Tyrosine-protein kinase 54.0 1.6E+02 0.0056 28.6 19.6 55 241-295 102-157 (406)
82 1fxk_A Prefoldin; archaeal pro 53.4 79 0.0027 24.7 10.1 42 291-332 63-104 (107)
83 1gk4_A Vimentin; intermediate 52.7 82 0.0028 24.7 10.6 47 302-348 10-56 (84)
84 1yke_B RNA polymerase II holoe 52.4 25 0.00084 31.0 5.9 42 356-397 91-132 (151)
85 4e81_A Chaperone protein DNAK; 51.7 1.1E+02 0.0037 27.8 10.2 10 163-172 62-71 (219)
86 3a7o_A Autophagy protein 16; c 51.6 34 0.0012 27.5 6.0 39 351-392 19-57 (75)
87 2zvf_A Alanyl-tRNA synthetase; 51.3 21 0.00072 30.3 5.2 50 279-328 4-53 (171)
88 2dq0_A Seryl-tRNA synthetase; 51.0 1.4E+02 0.0047 30.2 11.8 50 332-382 52-101 (455)
89 3i2w_A Syndapin, LD46328P; EFC 50.6 1.4E+02 0.0049 26.9 14.4 39 254-292 117-155 (290)
90 3caz_A BAR protein; thermo-aci 50.5 1.1E+02 0.0039 29.0 10.3 88 279-396 88-178 (294)
91 3a2a_A Voltage-gated hydrogen 50.3 38 0.0013 26.1 5.8 42 348-389 9-50 (58)
92 1o9d_A 14-3-3-like protein C; 50.0 1.1E+02 0.0036 29.2 10.2 84 312-396 13-112 (260)
93 2v0o_A FCHO2, FCH domain only 49.8 1.4E+02 0.0047 26.5 23.6 57 237-293 98-157 (276)
94 3mov_A Lamin-B1; LMNB1, B-type 49.8 91 0.0031 25.4 8.5 55 295-349 14-68 (95)
95 2qyw_A Vesicle transport throu 49.7 1E+02 0.0035 25.0 11.0 78 282-371 14-99 (102)
96 1ic2_A Tropomyosin alpha chain 48.7 93 0.0032 24.2 10.8 35 347-381 38-72 (81)
97 1ses_A Seryl-tRNA synthetase; 48.6 1.8E+02 0.0062 28.9 12.1 66 314-382 28-96 (421)
98 4ad8_A DNA repair protein RECN 48.4 2.1E+02 0.0073 28.3 16.6 44 350-393 288-331 (517)
99 3etw_A Adhesin A; antiparallel 48.3 1.3E+02 0.0045 25.8 13.3 84 305-389 11-100 (119)
100 3vmx_A Voltage-gated hydrogen 48.2 50 0.0017 24.6 6.0 39 349-387 3-41 (48)
101 2jee_A YIIU; FTSZ, septum, coi 47.6 1.1E+02 0.0038 24.8 9.4 24 305-328 11-34 (81)
102 1wt6_A Myotonin-protein kinase 46.4 77 0.0026 25.9 7.4 43 338-384 30-72 (81)
103 3qf7_D MRE11; ABC-ATPase, ATPa 46.0 21 0.00071 26.5 3.6 35 280-320 8-42 (50)
104 1ci6_A Transcription factor AT 45.8 72 0.0025 24.0 6.8 45 342-386 15-59 (63)
105 1x79_B RAB GTPase binding effe 45.3 1.4E+02 0.0049 25.4 13.8 82 259-343 7-88 (112)
106 1m1j_C Fibrinogen gamma chain; 45.2 60 0.0021 32.7 8.1 20 230-249 24-43 (409)
107 2nrj_A HBL B protein; enteroto 45.2 72 0.0024 31.0 8.5 87 301-391 117-203 (346)
108 2zqm_A Prefoldin beta subunit 44.5 1.2E+02 0.004 24.1 12.2 45 291-335 68-112 (117)
109 3uun_A Dystrophin; triple heli 44.4 1E+02 0.0035 23.4 13.4 110 222-343 5-114 (119)
110 1l8d_A DNA double-strand break 44.1 1.2E+02 0.0041 24.1 13.3 25 257-281 16-40 (112)
111 2p2u_A HOST-nuclease inhibitor 43.9 66 0.0023 28.4 7.3 43 326-368 28-70 (171)
112 3teq_A Stromal interaction mol 43.8 1.5E+02 0.005 25.0 9.0 69 314-382 10-82 (101)
113 1sjj_A Actinin; 3-helix bundle 42.9 3.1E+02 0.011 28.6 18.9 126 257-392 403-553 (863)
114 2akf_A Coronin-1A; coiled coil 42.1 26 0.0009 24.0 3.4 29 348-376 4-32 (32)
115 2i1j_A Moesin; FERM, coiled-co 41.8 48 0.0016 34.4 7.0 38 346-383 401-438 (575)
116 1sjj_A Actinin; 3-helix bundle 41.5 3.3E+02 0.011 28.4 19.9 48 316-363 573-626 (863)
117 2x7r_B Transmembrane protein G 40.6 69 0.0024 24.6 6.0 37 227-263 7-43 (63)
118 2e7s_A RAB guanine nucleotide 40.4 1.9E+02 0.0065 25.4 11.6 44 333-376 83-129 (135)
119 1dip_A Delta-sleep-inducing pe 40.3 33 0.0011 27.8 4.3 32 300-331 15-46 (78)
120 2v66_B Nuclear distribution pr 40.3 1.7E+02 0.0058 24.8 16.3 71 220-290 4-74 (111)
121 3a7p_A Autophagy protein 16; c 40.2 2E+02 0.007 25.7 12.2 23 316-338 126-148 (152)
122 1j1e_C Troponin I, TNI; THIN f 40.2 97 0.0033 28.4 7.9 41 301-346 59-100 (180)
123 3tkl_B LIDA protein, substrate 40.1 79 0.0027 30.3 7.5 57 227-298 12-68 (267)
124 3mov_A Lamin-B1; LMNB1, B-type 39.6 1.4E+02 0.0047 24.4 8.0 48 339-386 26-73 (95)
125 3efz_A 14-3-3 protein; 14-3-3, 39.5 58 0.002 31.3 6.7 85 312-396 34-130 (268)
126 3uul_A Utrophin; spectrin repe 39.2 1.3E+02 0.0043 23.0 13.7 108 225-344 8-115 (118)
127 1f5n_A Interferon-induced guan 38.3 3.7E+02 0.013 28.1 15.7 9 231-239 440-448 (592)
128 3i2w_A Syndapin, LD46328P; EFC 38.3 2.3E+02 0.0077 25.6 13.1 17 340-356 185-201 (290)
129 3s9g_A Protein hexim1; cyclin 37.9 1E+02 0.0034 26.2 7.1 23 363-385 64-86 (104)
130 2ve7_A Kinetochore protein HEC 37.6 29 0.00098 33.4 4.3 11 127-137 53-63 (315)
131 1j1d_C Troponin I, TNI; THIN f 37.0 1.1E+02 0.0037 26.7 7.4 43 301-348 59-102 (133)
132 2br9_A 14-3-3E, 14-3-3 protein 36.7 2.2E+02 0.0075 26.5 10.0 84 312-396 10-107 (234)
133 1nkp_A C-MYC, MYC proto-oncoge 36.6 1.2E+02 0.0041 24.1 7.2 51 283-333 20-74 (88)
134 2nrj_A HBL B protein; enteroto 36.6 1.2E+02 0.004 29.5 8.5 61 332-393 226-286 (346)
135 2xus_A Breast cancer metastasi 36.4 77 0.0026 23.6 5.5 23 265-287 6-28 (49)
136 1x8y_A Lamin A/C; structural p 35.8 1.2E+02 0.0042 23.9 7.1 44 304-347 7-50 (86)
137 3ghg_C Fibrinogen gamma chain; 35.8 3.1E+02 0.011 27.8 11.6 77 209-287 30-113 (411)
138 1naf_A ADP-ribosylation factor 35.2 1.5E+02 0.0053 26.2 8.3 49 280-329 92-144 (158)
139 3lss_A Seryl-tRNA synthetase; 35.2 3.7E+02 0.013 27.6 12.2 14 333-346 59-72 (484)
140 2wt7_A Proto-oncogene protein 35.2 1.4E+02 0.0047 22.3 7.4 41 346-386 19-59 (63)
141 3a7p_A Autophagy protein 16; c 34.9 2.5E+02 0.0085 25.1 10.9 72 218-293 67-138 (152)
142 1gk4_A Vimentin; intermediate 34.7 1.6E+02 0.0056 23.0 9.3 23 268-290 4-26 (84)
143 4emc_A Monopolin complex subun 34.7 85 0.0029 29.1 6.7 14 381-394 68-81 (190)
144 2x3v_A Syndapin I, protein kin 34.6 2.8E+02 0.0095 25.6 24.1 32 260-291 136-167 (337)
145 3gwo_A Envelope glycoprotein G 34.4 69 0.0023 23.8 5.0 30 234-263 5-34 (54)
146 3efg_A Protein SLYX homolog; x 34.2 1.4E+02 0.0047 23.6 7.0 43 352-394 16-58 (78)
147 2efk_A CDC42-interacting prote 34.0 2.6E+02 0.0088 25.0 23.0 21 276-296 120-140 (301)
148 4aj5_K Spindle and kinetochore 33.2 2.1E+02 0.0072 24.9 8.5 46 311-356 47-92 (123)
149 4b9q_A Chaperone protein DNAK; 32.5 2.7E+02 0.0093 28.4 10.8 22 374-395 582-603 (605)
150 1vp7_A Exodeoxyribonuclease VI 32.5 44 0.0015 27.9 4.1 51 347-398 31-81 (100)
151 3qne_A Seryl-tRNA synthetase, 32.1 3.5E+02 0.012 27.8 11.4 49 333-382 55-103 (485)
152 3mq7_A Bone marrow stromal ant 31.9 2.5E+02 0.0087 24.3 11.3 71 320-390 20-97 (121)
153 3u1c_A Tropomyosin alpha-1 cha 31.2 2.1E+02 0.0072 23.2 14.9 30 258-287 9-38 (101)
154 3ni0_A Bone marrow stromal ant 31.0 2.4E+02 0.0082 23.7 10.1 65 320-384 13-87 (99)
155 2efr_A General control protein 30.9 2.8E+02 0.0097 24.5 22.4 110 256-394 40-149 (155)
156 1t2k_D Cyclic-AMP-dependent tr 30.9 1.6E+02 0.0054 21.6 7.1 33 351-383 23-55 (61)
157 4emc_A Monopolin complex subun 30.7 2.8E+02 0.0095 25.7 9.4 16 376-391 66-81 (190)
158 4b6x_A AVRRPS4, avirulence pro 30.6 2.2E+02 0.0076 23.4 7.8 29 256-284 53-81 (90)
159 1dh3_A Transcription factor CR 30.5 1.6E+02 0.0055 21.6 7.5 45 349-394 8-52 (55)
160 1ytz_I Troponin I; muscle, THI 30.1 92 0.0032 28.6 6.1 44 301-349 56-100 (182)
161 4e81_A Chaperone protein DNAK; 29.5 3.2E+02 0.011 24.7 10.6 23 374-396 194-216 (219)
162 3bas_A Myosin heavy chain, str 29.3 2.1E+02 0.0073 22.6 11.2 54 335-395 34-87 (89)
163 3onj_A T-snare VTI1; helix, HA 28.9 2.2E+02 0.0076 22.7 10.0 55 320-375 30-91 (97)
164 1fxk_C Protein (prefoldin); ar 28.3 2.4E+02 0.0083 23.0 13.0 35 295-329 90-124 (133)
165 3mtu_E Head morphogenesis prot 28.3 1.6E+02 0.0056 23.7 6.5 45 229-277 33-77 (77)
166 2efr_A General control protein 28.2 3.1E+02 0.011 24.2 16.4 20 358-377 99-118 (155)
167 1uix_A RHO-associated kinase; 28.1 2.2E+02 0.0077 22.5 9.9 24 304-327 8-31 (71)
168 4dk0_A Putative MACA; alpha-ha 28.0 2.8E+02 0.0096 25.5 9.2 6 216-221 67-72 (369)
169 3trt_A Vimentin; cytoskeleton, 27.7 2E+02 0.0067 21.7 9.9 10 359-368 65-74 (77)
170 3qh9_A Liprin-beta-2; coiled-c 27.2 2.5E+02 0.0087 22.8 9.4 18 274-291 4-21 (81)
171 4h22_A Leucine-rich repeat fli 27.1 2.8E+02 0.0097 23.4 8.4 54 337-390 17-70 (103)
172 1u00_A HSC66, chaperone protei 26.8 3.5E+02 0.012 24.3 10.2 20 375-394 192-211 (227)
173 4afl_A P29ING4, inhibitor of g 26.8 2.4E+02 0.0082 22.4 10.6 34 314-347 62-95 (104)
174 3vem_A Helicase protein MOM1; 26.4 3.1E+02 0.011 23.6 10.8 44 214-260 34-77 (115)
175 2zxx_A Geminin; coiled-coil, c 26.1 1.9E+02 0.0065 23.3 6.6 24 365-388 42-65 (79)
176 1o3x_A ADP-ribosylation factor 25.9 1.5E+02 0.005 25.7 6.4 16 312-327 118-133 (140)
177 1qoy_A Hemolysin E; toxin, mem 25.0 5.1E+02 0.018 25.6 14.1 79 309-391 223-304 (318)
178 2ocy_A RAB guanine nucleotide 24.8 3.7E+02 0.013 23.9 18.9 39 324-362 71-109 (154)
179 3htk_A Structural maintenance 24.8 1.9E+02 0.0067 20.7 6.6 13 333-345 41-53 (60)
180 3nvo_A Zinc transport protein 24.5 3.7E+02 0.013 23.8 9.4 93 231-330 153-250 (264)
181 1jek_B ENV polyprotein; envelo 24.4 1.1E+02 0.0038 21.5 4.3 25 232-256 6-30 (36)
182 2dgc_A Protein (GCN4); basic d 24.3 2.3E+02 0.0079 21.3 6.6 36 360-395 26-61 (63)
183 3lay_A Zinc resistance-associa 24.2 2.1E+02 0.0073 25.6 7.3 32 331-362 112-143 (175)
184 3q0x_A Centriole protein; cent 24.2 3.5E+02 0.012 25.4 9.0 66 299-396 159-224 (228)
185 1go4_E MAD1 (mitotic arrest de 24.2 3.1E+02 0.011 22.8 7.9 65 215-279 15-96 (100)
186 3ghg_C Fibrinogen gamma chain; 24.1 5.7E+02 0.02 25.9 14.5 38 263-300 29-66 (411)
187 2ykt_A Brain-specific angiogen 24.0 4.4E+02 0.015 24.5 17.6 112 222-349 39-152 (253)
188 1nlw_A MAD protein, MAX dimeri 23.9 2.6E+02 0.0088 21.8 6.9 55 283-337 15-73 (80)
189 3f31_A Spectrin alpha chain, b 23.9 3E+02 0.01 22.6 12.8 55 277-339 17-71 (149)
190 3q8t_A Beclin-1; autophagy, AT 23.6 2.9E+02 0.01 22.3 14.2 28 257-284 10-37 (96)
191 2z2t_D Fusion inhibitor peptid 23.5 1.6E+02 0.0053 19.9 4.9 27 231-257 5-31 (36)
192 2j69_A Bacterial dynamin-like 23.4 6.5E+02 0.022 26.2 17.3 23 323-345 471-493 (695)
193 3vp9_A General transcriptional 23.3 1.4E+02 0.0049 24.6 5.5 27 241-267 58-84 (92)
194 2ycu_A Non muscle myosin 2C, a 23.2 58 0.002 36.1 4.1 41 348-392 906-947 (995)
195 3iox_A AGI/II, PA; alpha helix 23.1 6.6E+02 0.023 26.2 14.9 11 234-244 28-38 (497)
196 2q6q_A Spindle POLE BODY compo 22.9 2.9E+02 0.01 22.0 8.7 31 212-242 3-33 (74)
197 3bas_A Myosin heavy chain, str 22.8 2.9E+02 0.0098 21.9 10.8 22 252-273 36-57 (89)
198 2wt7_B Transcription factor MA 22.7 1.9E+02 0.0063 23.8 6.0 32 259-290 56-87 (90)
199 1ci6_A Transcription factor AT 22.4 2.2E+02 0.0075 21.3 6.0 43 349-392 9-51 (63)
200 2ocy_A RAB guanine nucleotide 22.4 4.1E+02 0.014 23.6 18.4 46 332-377 94-142 (154)
201 2v0o_A FCHO2, FCH domain only 22.3 4E+02 0.014 23.4 24.0 29 262-290 84-112 (276)
202 3obv_E Protein diaphanous homo 22.3 5.4E+02 0.018 25.8 10.6 170 231-401 254-444 (457)
203 3kqg_A Langerin, C-type lectin 22.2 1.3E+02 0.0043 25.0 5.2 47 337-388 4-50 (182)
204 3ter_A Mammalian stromal inter 22.1 4.1E+02 0.014 23.4 11.0 37 314-350 41-77 (136)
205 1fxk_C Protein (prefoldin); ar 21.8 3.3E+02 0.011 22.2 12.5 13 287-299 33-45 (133)
206 3s84_A Apolipoprotein A-IV; fo 21.7 5E+02 0.017 24.3 20.9 11 382-392 231-241 (273)
207 1lwu_C Fibrinogen gamma chain; 21.6 2.1E+02 0.007 28.0 7.2 26 348-373 24-49 (323)
208 4fla_A Regulation of nuclear P 21.5 4.1E+02 0.014 23.2 10.9 83 264-350 64-146 (152)
209 1gmj_A ATPase inhibitor; coile 21.4 3.3E+02 0.011 22.2 8.5 23 362-384 56-78 (84)
210 3fpp_A Macrolide-specific effl 21.4 3.2E+02 0.011 24.9 8.1 11 353-363 131-141 (341)
211 1uii_A Geminin; human, DNA rep 21.2 3.4E+02 0.012 22.1 7.6 29 362-390 51-79 (83)
212 1ic2_A Tropomyosin alpha chain 21.1 2.9E+02 0.0099 21.3 11.2 41 257-297 5-45 (81)
213 2wvr_A Geminin; DNA replicatio 21.1 2.8E+02 0.0097 26.0 7.6 23 366-388 124-146 (209)
214 4dk0_A Putative MACA; alpha-ha 20.7 4.9E+02 0.017 23.9 10.2 18 269-286 67-84 (369)
215 3vie_B Sifuvirtide; 6-helix bu 20.6 1.9E+02 0.0065 19.6 4.9 29 231-259 6-34 (37)
216 1quu_A Human skeletal muscle a 20.2 4.4E+02 0.015 23.1 12.3 21 375-395 133-153 (250)
217 1lwu_B Fibrinogen beta chain; 20.2 1.5E+02 0.0052 28.9 5.9 47 330-376 7-54 (323)
218 3vp9_A General transcriptional 20.2 2.3E+02 0.0079 23.4 6.1 17 343-359 68-84 (92)
219 2v4h_A NF-kappa-B essential mo 20.2 4.1E+02 0.014 22.7 12.2 56 266-325 25-80 (110)
220 2i1j_A Moesin; FERM, coiled-co 20.1 1.7E+02 0.0058 30.3 6.6 37 327-363 407-446 (575)
No 1
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=97.45 E-value=0.0052 Score=52.07 Aligned_cols=107 Identities=15% Similarity=0.232 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHH
Q psy13761 231 YQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHS 310 (402)
Q Consensus 231 M~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ie 310 (402)
|..+=.-|+.+|.. +..+|..+..+|..+..++.++..+..|+=.|||. |-.++..++
T Consensus 11 ~~~~~~~ye~~I~~-----------LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~-----------E~~~r~~~E 68 (119)
T 3ol1_A 11 MSRLGDLYEEEMRE-----------LRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQE-----------EMLQREEAE 68 (119)
T ss_dssp --CCTHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHH
T ss_pred ccccHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----------HHHHHHHHH
Confidence 34444567777665 45567778899999999999999999999999985 334555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Q psy13761 311 ELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAML 359 (402)
Q Consensus 311 ey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~L 359 (402)
.-...+++.-..--..|.-.+.+++...+||+-+++.|+.|+..|++++
T Consensus 69 ~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~heeEl~eLq~qi 117 (119)
T 3ol1_A 69 NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQI 117 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555566555555566777888999999999999999999999999875
No 2
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=97.26 E-value=0.073 Score=45.36 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=29.3
Q ss_pred HHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDA 325 (402)
Q Consensus 263 llkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqA 325 (402)
+..+...+...+..+...+.++-.++..++.-+..+...-..+...+..+..++.....+...
T Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (284)
T 1c1g_A 137 DEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKT 199 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444555555555444444444444444444444444444444444333
No 3
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.98 E-value=0.09 Score=48.75 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHH
Q psy13761 255 QFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIE 296 (402)
Q Consensus 255 ~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIe 296 (402)
.....+..+..+.+.+...+..+|....++-.|-.+.+.-+.
T Consensus 43 ~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~ 84 (256)
T 3na7_A 43 AKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMS 84 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444444444444433
No 4
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=96.96 E-value=0.15 Score=43.50 Aligned_cols=23 Identities=4% Similarity=0.209 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 222 EKLKKENASYQKMLNDYENTITQ 244 (402)
Q Consensus 222 e~l~~~n~eM~~Im~EYEktI~q 244 (402)
..+......+..-+..++..+..
T Consensus 23 ~~l~~~l~~l~~~~~~~~~~~~~ 45 (284)
T 1c1g_A 23 DEAEADKKAAEDRSKQLEDELVS 45 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444443333
No 5
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.13 E-value=0.13 Score=51.08 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=49.8
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEK 336 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ 336 (402)
+.+++++..+.++..+.++.++..+.+.-.+|...+ +++.+..+.+++.++...++.+..+..++.++.-+.++.+.
T Consensus 462 ~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (597)
T 3oja_B 462 RAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPK---DGLARSSDNLNKVFTHLKERQAFKLRETQARRTEADAKQKE 538 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC---CSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCccc---cccCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcc
Confidence 444455555555544444444444333333333111 13333334555555555555555555555544433222221
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 337 ANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 337 ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
. .+.+.+...++..++..+-++..+.+++...+++..+
T Consensus 539 ~--------~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~ 576 (597)
T 3oja_B 539 T--------EDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQ 576 (597)
T ss_dssp H--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------hhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 1 2222344444444444444444444444444444443
No 6
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=95.07 E-value=0.39 Score=50.35 Aligned_cols=111 Identities=12% Similarity=0.177 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHH
Q psy13761 230 SYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARH 309 (402)
Q Consensus 230 eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~i 309 (402)
+|+..|.+.|+.+...|++ ++..|..+.+++.+.|.-|..+.+.+.+=.++-....+.+
T Consensus 50 rLQglLdkqErDltkrINE---------------------LKnqLEdlsKnsKdseqy~k~~~E~Lr~rq~q~~dNdNty 108 (562)
T 3ghg_A 50 RMKGLIDEVNQDFTNRINK---------------------LKNSLFEYQKNNKDSHSLTTNIMEILRGDFSSANNRDNTY 108 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------------------HHHHHTHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH
T ss_pred chhhhHHhhcCcHHHHHHH---------------------HHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhccchhH
Confidence 3666677777777666655 2223333456666776666555444322111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHH
Q psy13761 310 SELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEE 379 (402)
Q Consensus 310 eey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKE 379 (402)
.+| -..++.+++.||.....+| +.+.+||..|+..-++++-||..++.|...
T Consensus 109 nE~---S~ELRRrIqyLKekVdnQl---------------snIrvLQsnLedq~~kIQRLEvDIdiqirs 160 (562)
T 3ghg_A 109 NRV---SEDLRSRIEVLKRKVIEKV---------------QHIQLLQKNVRAQLVDMKRLEVDIDIKIRS 160 (562)
T ss_dssp HHT---THHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1244556666664433332 456778888888888888888888887654
No 7
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.78 E-value=2.3 Score=52.55 Aligned_cols=84 Identities=18% Similarity=0.272 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH---HhhHHHHHHHHHHhhHHHHHHhhHHHHHHH
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKAN------QDLDLRN---KTYEMETTKLKAMLKKSEMQITSLQESLAR 375 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~AN------EEIaqvr---sk~eaE~~aLqA~LKKeEmkv~SLEesLEQ 375 (402)
-|+.+++.++.+.++...-++.|+-|++.|+.|. ++++++. ..+++++.+.++.|+..+-+++.|+.+.+.
T Consensus 1974 ~k~~v~~~~~~~~~~~~ei~~~k~~~e~dL~~A~Pa~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~ 2053 (3245)
T 3vkg_A 1974 KQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYAT 2053 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666677777778888888888888877764 3333322 334455556666666666666666666666
Q ss_pred HHHHHHHHHHHHH
Q psy13761 376 KTEENAELTSICD 388 (402)
Q Consensus 376 KtKENeELTkICD 388 (402)
.++|.+.|..=.+
T Consensus 2054 ~~~ek~~L~~e~~ 2066 (3245)
T 3vkg_A 2054 LIRETEQIKTESS 2066 (3245)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666554433
No 8
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=94.27 E-value=3.3 Score=38.23 Aligned_cols=87 Identities=13% Similarity=0.098 Sum_probs=45.7
Q ss_pred HhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHH
Q psy13761 296 EGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLAR 375 (402)
Q Consensus 296 egyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQ 375 (402)
+..+..-..+.+.+.+++.+++..+... +.+...+.....+++..+....+.+..+++.+....-+...|...+
T Consensus 100 e~~~~~i~~lE~eile~~e~ie~~~~~l----~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l~~~i-- 173 (256)
T 3na7_A 100 DIAKERSNQANREIENLQNEIKRKSEKQ----EDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKT-- 173 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 3333333334444444444444433332 2344555666666666666666666666666655555554443333
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy13761 376 KTEENAELTSICDDLIS 392 (402)
Q Consensus 376 KtKENeELTkICDELIs 392 (402)
-.+|.+..+-+..
T Consensus 174 ----~~~lL~~Yerir~ 186 (256)
T 3na7_A 174 ----EPKIYSFYERIRR 186 (256)
T ss_dssp ----CHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHH
Confidence 3467777777765
No 9
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=94.26 E-value=3.3 Score=38.13 Aligned_cols=130 Identities=13% Similarity=0.147 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHH
Q psy13761 216 EKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVII 295 (402)
Q Consensus 216 ~~~~~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevI 295 (402)
.|+..+.+.+..+.+|..=+++|-..=.+|=.+ +-.+|..+|+.-++|-.+
T Consensus 14 ywk~~~~~~~q~~~~le~El~EFqesSrELE~E---------------------LE~eL~~~Ek~~~~L~~~-------- 64 (189)
T 2v71_A 14 YWKELSMKYKQSFQEARDELVEFQEGSRELEAE---------------------LEAQLVQAEQRNRDLQAD-------- 64 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHH--------
Confidence 588888999999999998888886643333222 223333344444444333
Q ss_pred HhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHH
Q psy13761 296 EGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLAR 375 (402)
Q Consensus 296 egyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQ 375 (402)
+..+...+..|..||+..+.-+...+.....+|+.++.. ...|+..+|..+.....|++....
T Consensus 65 -------------~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~----~~~l~~~ireLEq~NDdlEr~~R~ 127 (189)
T 2v71_A 65 -------------NQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAI----KEQLHKYVRELEQANDDLERAKRA 127 (189)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 333444444455555555555555555555565555533 334555556666666666555555
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13761 376 KTEENAELTSICDDLI 391 (402)
Q Consensus 376 KtKENeELTkICDELI 391 (402)
.+-=++.+-.--+..|
T Consensus 128 ~~~SleD~e~kln~ai 143 (189)
T 2v71_A 128 TIMSLEDFEQRLNQAI 143 (189)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHH
Confidence 5544444444444444
No 10
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.88 E-value=3.8 Score=50.72 Aligned_cols=45 Identities=27% Similarity=0.279 Sum_probs=21.0
Q ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc
Q psy13761 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLS 395 (402)
Q Consensus 351 E~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~ 395 (402)
++.+.++.|+..+-++..+++.|++.+.+.+++++=...|-.+++
T Consensus 2022 ~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~ 2066 (3245)
T 3vkg_A 2022 AANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESS 2066 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444444444444444444444443
No 11
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=93.80 E-value=2.6 Score=46.93 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=35.3
Q ss_pred HHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLD 342 (402)
Q Consensus 263 llkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIa 342 (402)
+..|...+..++..+|+.-.++. ..+.-+..+.+--+.|++.++...+..+..+++++.++..-++++....+|.+
T Consensus 958 ~~~e~~~L~~~l~~le~~~~e~~----~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~ 1033 (1080)
T 2dfs_A 958 YSTETEKLRSDVERLRMSEEEAK----NATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNT 1033 (1080)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445444555555433322 33333344444444444444444445555555555555444444444444443
Q ss_pred HHH
Q psy13761 343 LRN 345 (402)
Q Consensus 343 qvr 345 (402)
.++
T Consensus 1034 ~L~ 1036 (1080)
T 2dfs_A 1034 LLK 1036 (1080)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 12
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=92.52 E-value=6.4 Score=36.23 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhH
Q psy13761 215 DEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNS 277 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~ 277 (402)
..+...|.+++.+..++..-=.++|.-+-.=|...++........+.++..|.+.+...+...
T Consensus 20 ~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~ 82 (189)
T 2v71_A 20 MKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQ 82 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777788888777777777777777777777777777777778888888888877655433
No 13
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=92.35 E-value=0.53 Score=49.38 Aligned_cols=49 Identities=12% Similarity=0.009 Sum_probs=36.8
Q ss_pred HHHhHHHhhH-HHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 273 HLRNSEIAFN-DVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVN 321 (402)
Q Consensus 273 DLnS~EkSFS-DLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQ 321 (402)
++.+.=..|+ +|=++|.-+|..|.+-.+|-..|++.|++....|+++|-
T Consensus 103 dNdNtynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 103 NRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555666 788888888888888778888888888877777776664
No 14
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=92.23 E-value=5.8 Score=44.22 Aligned_cols=13 Identities=31% Similarity=0.440 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHH
Q psy13761 311 ELEEELKKQVNKY 323 (402)
Q Consensus 311 ey~~rvkkeeQRY 323 (402)
.+.+.+...++.|
T Consensus 988 ~L~~e~~~l~~~~ 1000 (1080)
T 2dfs_A 988 SLQEEIAKLRKEL 1000 (1080)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 15
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=92.22 E-value=2.4 Score=34.17 Aligned_cols=83 Identities=12% Similarity=0.181 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 255 QFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQL 334 (402)
Q Consensus 255 ~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKL 334 (402)
....++..+..++.++..++.++.-+..|+-.|||. |-.++.+++.=...+++.-.-.-.-|..-+.++
T Consensus 4 eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~-----------E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE~kv 72 (86)
T 3swk_A 4 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQE-----------EMLQREEAENTLQSFRQDVDNASLARLDLERKV 72 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 356778889999999999999999999999999974 334444454444444444444445566677777
Q ss_pred HHHHHHHHHHHHhh
Q psy13761 335 EKANQDLDLRNKTY 348 (402)
Q Consensus 335 e~ANEEIaqvrsk~ 348 (402)
+...+||+-+++.|
T Consensus 73 esL~eEl~fLkk~h 86 (86)
T 3swk_A 73 ESLQEEIAFLKKLH 86 (86)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhcC
Confidence 77888888877655
No 16
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=90.39 E-value=6 Score=40.10 Aligned_cols=102 Identities=14% Similarity=0.223 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHH----HHhhHHHHHhhHhhHHHH
Q psy13761 230 SYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLK----YERSKVIIEGMKANEDHL 305 (402)
Q Consensus 230 eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrR----YEK~KevIegyKkNEE~L 305 (402)
.|+.+|++.++.|..-|++ +...|..+.+++.+.|.- |+.+|+....-+.|+.++
T Consensus 53 rLqg~Ldk~er~~~~rIe~---------------------L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~ 111 (390)
T 1deq_A 53 RMKGLIDEVDQDFTSRINK---------------------LRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTF 111 (390)
T ss_pred hHHHHHHHhhhhHHHHHHH---------------------HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHH
Confidence 3666666666555444433 233333444444444443 445555555556666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHh
Q psy13761 306 RARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQIT 367 (402)
Q Consensus 306 Kk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~ 367 (402)
-+-. ..+++||.-||.....+|. .|..+ +..+..+...++|.|+.|.
T Consensus 112 ~e~s-------~eLe~~i~~lk~~V~~q~~----~ir~L----q~~l~~q~~kiqRLE~~Id 158 (390)
T 1deq_A 112 KQIN-------EDLRSRIEILRRKVIEQVQ----RINLL----QKNVRDQLVDMKRLEVDID 158 (390)
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHhH----HHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 4333 3456777778877766665 22222 3334445555666666654
No 17
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=89.68 E-value=22 Score=37.33 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=30.7
Q ss_pred HHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHH
Q psy13761 261 KELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQ 319 (402)
Q Consensus 261 qkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkke 319 (402)
..+..+-++++++|+-.+++|+..-.|-.+.-.++...|.-=...-+.+.+....++.-
T Consensus 317 ~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~~f 375 (551)
T 2b5u_A 317 EAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQF 375 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhhhh
Confidence 33444555555566656666666655555555555554444444444555555544443
No 18
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=88.64 E-value=9.8 Score=31.86 Aligned_cols=52 Identities=23% Similarity=0.272 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHH----HHHHhhHHHHHHH
Q psy13761 324 DALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKS----EMQITSLQESLAR 375 (402)
Q Consensus 324 qALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKe----Emkv~SLEesLEQ 375 (402)
.+++..|+......+.|++.+-.+.=.|+-.+=|.-|+. +.++..|..+|.-
T Consensus 39 ~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e~~~~e~kn~~L~~qL~d 94 (97)
T 2eqb_B 39 NELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLRE 94 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 356677888888888888888777655555555544555 5555555555543
No 19
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=87.96 E-value=8.1 Score=32.68 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=19.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 256 FEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 256 ~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK 290 (402)
+...++.+..|-+.+...-.++|.+..|+-.+|+.
T Consensus 43 lrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~ 77 (131)
T 3tnu_A 43 LRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM 77 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555556666555555543
No 20
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=87.47 E-value=12 Score=31.49 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=20.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 256 FEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 256 ~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK 290 (402)
+...++.+..|-+.+...-.++|.+..|+-.+|+.
T Consensus 41 lrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~ 75 (129)
T 3tnu_B 41 MNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL 75 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34455556666666665556666666666555543
No 21
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=86.40 E-value=18 Score=32.55 Aligned_cols=61 Identities=13% Similarity=0.150 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHH
Q psy13761 236 NDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIE 296 (402)
Q Consensus 236 ~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIe 296 (402)
.+...-+..+..+.++.++.+.....++.++......+|...-+.|....+.+++.+.-.+
T Consensus 101 ~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~ 161 (305)
T 2efl_A 101 SQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFE 161 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666667677777788888889999999999999999999999888888877544
No 22
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=86.21 E-value=15 Score=31.31 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHH
Q psy13761 304 HLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAEL 383 (402)
Q Consensus 304 ~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeEL 383 (402)
.|+..+..+.-.++.|..+|+..+.-+...+.....+|+.++..+. .|+..+|..|.....|+++-...+-=.+++
T Consensus 7 dL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~----~l~~~iReLEq~NDDLER~~R~t~~SLeD~ 82 (111)
T 2v66_B 7 DLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKE----QLHKYVRELEQANDDLERAKRATIVSLEDF 82 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhchHHHHHHHHHHhhHHHH
Confidence 4555555555566666666666666666666666666666555433 345556666666666555544444333333
No 23
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=85.90 E-value=19 Score=35.08 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTY 348 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~ 348 (402)
.+..+..+.+....+.+++..-+++.+..++.....|+..+..+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (487)
T 3oja_A 429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATL 472 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHH
Confidence 33334444444444444444444444444555555554444443
No 24
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=85.88 E-value=14 Score=30.83 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy13761 306 RARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTS 385 (402)
Q Consensus 306 Kk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTk 385 (402)
+....+.....+..+.+++.++..+..++...+..++.+++.-.+ -...+..|..+++...+++.+|+.
T Consensus 21 ~q~~~e~e~~k~eL~~~~~~~~~~~~~k~~eq~~~le~lk~eL~~-----------~~~el~~lq~~l~~~~~~~~~l~~ 89 (107)
T 2no2_A 21 RQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELAT-----------SQRELQVLQGSLETSAQSEANWAA 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666777778888888889999999988888888776443 222333366667777777777777
Q ss_pred HHHHHHH
Q psy13761 386 ICDDLIS 392 (402)
Q Consensus 386 ICDELIs 392 (402)
=|++|.+
T Consensus 90 ~~~~l~~ 96 (107)
T 2no2_A 90 EFAELEK 96 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 25
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=85.63 E-value=28 Score=36.20 Aligned_cols=29 Identities=10% Similarity=0.209 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhHHHHHHhhHHHHHHHHHH
Q psy13761 350 METTKLKAMLKKSEMQITSLQESLARKTE 378 (402)
Q Consensus 350 aE~~aLqA~LKKeEmkv~SLEesLEQKtK 378 (402)
..+.+||..|+..-.+++-||..+..+..
T Consensus 132 ~~IrvLq~~l~~q~skIQRLE~dI~~q~~ 160 (491)
T 1m1j_A 132 NRIKALQNSIQEQVVEMKRLEVDIDIKIR 160 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667788888888888888888877653
No 26
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=84.95 E-value=25 Score=34.12 Aligned_cols=18 Identities=11% Similarity=0.113 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy13761 330 AISQLEKANQDLDLRNKT 347 (402)
Q Consensus 330 AEEKLe~ANEEIaqvrsk 347 (402)
-..+|..+..-..+++.+
T Consensus 402 ~~~~~~~~~~~~~~~~~~ 419 (471)
T 3mq9_A 402 LQQELTEAQKGFQDVEAQ 419 (471)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH
Confidence 334444444444444433
No 27
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=84.81 E-value=8.4 Score=32.99 Aligned_cols=78 Identities=13% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHH
Q psy13761 229 ASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRAR 308 (402)
Q Consensus 229 ~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ 308 (402)
.+=+.+|..|.+-|.+|=.+....+ ...++++.|.+++..++..+++.-.+- +.+...
T Consensus 36 ~E~q~~v~ql~~~i~~Le~eL~e~r----~~~q~a~~e~e~Lr~e~~~l~~~~~~~------------------~~~q~~ 93 (120)
T 3i00_A 36 TESQRVVLQLKGHVSELEADLAEQQ----HLRQQAADDCEFLRAELDELRRQREDT------------------EKAQRS 93 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCC--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhh------------------HHHHHH
Confidence 3344556666666666655555443 235667777777777666543322211 122333
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy13761 309 HSELEEELKKQVNKYDALKT 328 (402)
Q Consensus 309 ieey~~rvkkeeQRYqALKa 328 (402)
+.+.+.+-+.-++||+.||.
T Consensus 94 ~~e~E~kAqa~Eerf~KLKe 113 (120)
T 3i00_A 94 LSEIERKAQANEQRYSKLKE 113 (120)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555555666677777764
No 28
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=83.21 E-value=41 Score=34.65 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=22.5
Q ss_pred HHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHH
Q psy13761 345 NKTYEMETTKLKAMLKKSEMQITSLQESLARKT 377 (402)
Q Consensus 345 rsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKt 377 (402)
...+...+..|+..+.....+|+.|+..+.++.
T Consensus 163 ~~~~~~~i~~L~~~~~~l~~ki~~l~~~~~~~~ 195 (464)
T 1m1j_B 163 DNNIPSSLRVLRAVIDSLHKKIQKLENAIATQT 195 (464)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777777777777777777665543
No 29
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=82.93 E-value=27 Score=31.66 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHH
Q psy13761 215 DEKDKLIEKLKKENASYQKMLNDYENTITQCV----------NQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDV 284 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM~~Im~EYEktI~qlI----------eE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDL 284 (402)
+++..++...-.....|++.-.|+-++++++- .-.+..+...+.++..+....++=+.+..-...-..||
T Consensus 16 ~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~el 95 (168)
T 3o0z_A 16 EEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDL 95 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666654444455566666666665555432 12222233334444444444444444444444444555
Q ss_pred HHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 285 HLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYD 324 (402)
Q Consensus 285 hrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYq 324 (402)
-.|..-+.+=++..+.++..+......+.++|-..+..+-
T Consensus 96 q~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a 135 (168)
T 3o0z_A 96 QARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKN 135 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555555555555555555554444433
No 30
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=82.88 E-value=27 Score=31.55 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHh
Q psy13761 236 NDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEG 297 (402)
Q Consensus 236 ~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIeg 297 (402)
.+...-+..++.+..+.++.+.....++.++......+|...-+.|..+.+.+++.+.....
T Consensus 94 ~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~~ 155 (301)
T 2efk_A 94 VRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAER 155 (301)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445566677777777788888888999999999999998888898888888888776543
No 31
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=82.19 E-value=21 Score=29.94 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=44.5
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEK 336 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ 336 (402)
+.++..+...-..-..+|.+...-.+++-+....+.-=|.+++.--..|-..+.+...+....-..|++.-.+-+..|..
T Consensus 14 ~~K~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~ 93 (129)
T 3tnu_B 14 QTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQK 93 (129)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 34445555555555555666666666666666666666666655555666666666666665555566555666666666
Q ss_pred HHHHHHHHHHhhH
Q psy13761 337 ANQDLDLRNKTYE 349 (402)
Q Consensus 337 ANEEIaqvrsk~e 349 (402)
+..++++.-..++
T Consensus 94 ~r~e~~~ql~EYq 106 (129)
T 3tnu_B 94 AKQDMARLLREYQ 106 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666665555554
No 32
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=81.82 E-value=16 Score=31.44 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhH
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSL 369 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SL 369 (402)
-...++.+.+-..+..+|...+.+.+..+. =..++.++.++++.....|+..++..+..|.-.
T Consensus 39 A~~~La~~~~l~~~i~er~~~i~~~~~~~~--yk~~y~~l~k~Y~~~~keLd~~ik~qekiIdnF 101 (119)
T 3etw_A 39 ARQALAQNEQVYNELSQRAQRLQAEANTRF--YKSQYQELASKYEDALKKLEAEMEQQKAVISDF 101 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCT--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444434444444444443332222 124667777777777777777777777666544
No 33
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=81.20 E-value=17 Score=30.62 Aligned_cols=93 Identities=11% Similarity=0.162 Sum_probs=44.5
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEK 336 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ 336 (402)
+.++..+...-.....+|.+...-.+++-+....+.-=|.+++.--..|...+.+...+....-+.|+..-.+-+..|..
T Consensus 16 ~~K~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~ 95 (131)
T 3tnu_A 16 FTKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQ 95 (131)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555566666666667776666666666666666556666666666666666666666666666666666
Q ss_pred HHHHHHHHHHhhH
Q psy13761 337 ANQDLDLRNKTYE 349 (402)
Q Consensus 337 ANEEIaqvrsk~e 349 (402)
+..++++.-+.++
T Consensus 96 ~r~em~~ql~EYq 108 (131)
T 3tnu_A 96 LRCEMEQQNQEYK 108 (131)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666654
No 34
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=80.97 E-value=8.2 Score=32.32 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=18.0
Q ss_pred HHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy13761 350 METTKLKAMLKKSEMQITSLQESLARKTEENAELTS 385 (402)
Q Consensus 350 aE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTk 385 (402)
.++..|+..|.++.-+....+....+..+|.++||.
T Consensus 26 ~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTa 61 (97)
T 2eqb_B 26 DEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTA 61 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555555555555555555555553
No 35
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=79.56 E-value=29 Score=36.16 Aligned_cols=90 Identities=11% Similarity=0.075 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhh
Q psy13761 215 DEKDKLIEKLKKENASY---QKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERS 291 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM---~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~ 291 (402)
.+....|++|+.....+ ..-+..|-+.|..++.+.+.+....+..+.++.. ||=+||+=+
T Consensus 61 rdv~~rI~kLkn~L~~~s~s~~~s~~y~~~~~~~lk~~~~q~~dndn~~~e~S~-----------------eLe~ri~yI 123 (491)
T 1m1j_A 61 QNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVST-----------------ELRRRIVTL 123 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhccchhHHHHHHH-----------------HHHHHHHHH
Confidence 45666677777644444 3446677777777776655555554444433332 344555555
Q ss_pred HHHHHhhHhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 292 KVIIEGMKANEDHLRARHSELEEELKKQVN 321 (402)
Q Consensus 292 KevIegyKkNEE~LKk~ieey~~rvkkeeQ 321 (402)
|+.|.+-=.|...|+.-|++....|+++|.
T Consensus 124 K~kVd~qi~~IrvLq~~l~~q~skIQRLE~ 153 (491)
T 1m1j_A 124 KQRVATQVNRIKALQNSIQEQVVEMKRLEV 153 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655544447777777777766666665553
No 36
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=79.09 E-value=12 Score=30.31 Aligned_cols=63 Identities=17% Similarity=0.326 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy13761 325 ALKTHAISQLEKANQDLDLRNKTYEM---ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSIC 387 (402)
Q Consensus 325 ALKaHAEEKLe~ANEEIaqvrsk~ea---E~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkIC 387 (402)
.|+....++++.+.-||+.+++..+. =-.+|..++.+.+-....++..++-....++||.+.|
T Consensus 11 KLRrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~~l 76 (78)
T 3iv1_A 11 KLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELSSAL 76 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46666777788888888887766432 2346778888888888888888888888888888764
No 37
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=78.65 E-value=18 Score=35.24 Aligned_cols=14 Identities=14% Similarity=0.166 Sum_probs=5.1
Q ss_pred HHHHHHHhHHHhhH
Q psy13761 269 EVQLHLRNSEIAFN 282 (402)
Q Consensus 269 Qa~aDLnS~EkSFS 282 (402)
.+...+....+...
T Consensus 371 ~le~~~~~~~~~~~ 384 (487)
T 3oja_A 371 ALDEQVSNGRRAHA 384 (487)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33333333333333
No 38
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=76.78 E-value=33 Score=28.90 Aligned_cols=65 Identities=22% Similarity=0.339 Sum_probs=36.3
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 250 ENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVN 321 (402)
Q Consensus 250 eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQ 321 (402)
+..++.++....++..++..+...|.+--..++|...+++++.. ....|-..+.++..++..++.
T Consensus 33 e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~-------~k~eLe~~l~el~~rleeeee 97 (129)
T 2fxo_A 33 EARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIK-------NKIQLEAKVKEMNKRLEDEEE 97 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 34455556667777777777777777655555666555554432 222344444555555544443
No 39
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=76.66 E-value=64 Score=32.16 Aligned_cols=11 Identities=27% Similarity=0.347 Sum_probs=4.6
Q ss_pred HHHHHHHHHHc
Q psy13761 383 LTSICDDLISK 393 (402)
Q Consensus 383 LTkICDELIsK 393 (402)
+..+|++|...
T Consensus 263 ~~~~~e~l~~~ 273 (486)
T 3haj_A 263 YKAIYHDLEQS 273 (486)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444433
No 40
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=76.26 E-value=29 Score=35.17 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhH
Q psy13761 215 DEKDKLIEKLKKENASY---QKMLNDYENTITQCVNQRENDKKQFEKYKKELEKE 266 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM---~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkE 266 (402)
.++...|++|+.....| .+-+..|-+.|..++.+.+.+....+..+.++..+
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~e 117 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINED 117 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Confidence 46777778877655554 34466777777777777666665555444444433
No 41
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=75.07 E-value=80 Score=32.51 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=12.3
Q ss_pred HHhhHHHHHHhhHHHHHHHHHHHHHHHH
Q psy13761 357 AMLKKSEMQITSLQESLARKTEENAELT 384 (402)
Q Consensus 357 A~LKKeEmkv~SLEesLEQKtKENeELT 384 (402)
..++..+..+..+...|.+.+.....+.
T Consensus 168 ~~i~~L~~~~~~l~~ki~~l~~~~~~~~ 195 (464)
T 1m1j_B 168 SSLRVLRAVIDSLHKKIQKLENAIATQT 195 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444433
No 42
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=74.45 E-value=34 Score=28.03 Aligned_cols=46 Identities=9% Similarity=0.046 Sum_probs=22.6
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHH
Q psy13761 243 TQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKY 288 (402)
Q Consensus 243 ~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRY 288 (402)
..++.=.++........+..+....+.+...|+.++.-..+...++
T Consensus 11 ~~ll~l~~~~ed~a~~~l~~a~~~~~~~~~~L~~L~~~~~~y~~~~ 56 (150)
T 3ajw_A 11 ETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNL 56 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334333444444445555555555555555555555544444333
No 43
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=74.45 E-value=27 Score=28.23 Aligned_cols=58 Identities=9% Similarity=0.122 Sum_probs=50.1
Q ss_pred HHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q psy13761 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQV 320 (402)
Q Consensus 263 llkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkee 320 (402)
+...-+|..++|+++-+.=.+|..---|++.+|..++.+...+.+.|+-|..+.+..+
T Consensus 16 l~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 16 MKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566789999999999999999999999999999999999999888887777665543
No 44
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=73.86 E-value=75 Score=31.65 Aligned_cols=28 Identities=25% Similarity=0.323 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy13761 331 ISQLEKANQDLDLRNKTYEMETTKLKAM 358 (402)
Q Consensus 331 EEKLe~ANEEIaqvrsk~eaE~~aLqA~ 358 (402)
..++++|..+....+..+..-+.+++..
T Consensus 191 ~~k~~k~~~~~~~a~~~Y~~~v~~~n~~ 218 (486)
T 3haj_A 191 QDKIEKCKQDVLKTKEKYEKSLKELDQG 218 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555555555444
No 45
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=72.05 E-value=75 Score=31.99 Aligned_cols=62 Identities=31% Similarity=0.317 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHH--HHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Q psy13761 332 SQLEKANQDLDLRNKTYEMETTKL--KAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSSCV 398 (402)
Q Consensus 332 EKLe~ANEEIaqvrsk~eaE~~aL--qA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~~~~ 398 (402)
..+.+|-+++.+.+++.+.|-.+. +|.++ ++..... -..+.....+=+..-|+||+++.+|.
T Consensus 386 ~~f~~A~~en~~~~~~~e~eekr~~~e~~~~-~~~~~~r----~~~~~~~~~~~~g~~D~Ll~~Lr~g~ 449 (483)
T 2j1d_G 386 QAVSEAKQENENMRKKKEEEERRARMEAQLK-EQRERER----KMRKAKENSEESGEFDDLVSALRSGE 449 (483)
T ss_dssp HHHHHHHHHHHHHHTHHHHTHHHHHHHHHHH-HHHHHHH----HHHHC---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----HhccCCCCCcccccHHHHHHHHhCCC
Confidence 446667777777666555444332 22222 2222111 01111111223467899999998864
No 46
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=71.45 E-value=4.2 Score=38.64 Aligned_cols=81 Identities=20% Similarity=0.329 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHH-------------HH
Q psy13761 312 LEEELKKQVNKYDAL----KTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQES-------------LA 374 (402)
Q Consensus 312 y~~rvkkeeQRYqAL----KaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEes-------------LE 374 (402)
|.+++..+-.||+-| |.-++..-+.-++|-.-+-.-++.=+-+.++.+|-.- |++.. -+
T Consensus 9 ~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiis----sieqke~~~~~~~~~~~i~~ 84 (248)
T 3uzd_A 9 QKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVIS----SIEQKTSADGNEKKIEMVRA 84 (248)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHC---CCC-HHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHH----HHHHHhhccCCHHHHHHHHH
Confidence 667777777787654 5444444455667777777778888888888888541 11110 01
Q ss_pred HHHHHHHHHHHHHHHHHHcccc
Q psy13761 375 RKTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 375 QKtKENeELTkICDELIsK~~~ 396 (402)
-+.|=..||..||+++|.=++.
T Consensus 85 yr~kie~EL~~iC~dil~lld~ 106 (248)
T 3uzd_A 85 YREKIEKELEAVCQDVLSLLDN 106 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 1222346899999999876543
No 47
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=70.96 E-value=10 Score=35.61 Aligned_cols=78 Identities=8% Similarity=0.062 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHH------
Q psy13761 311 ELEEELKKQVNKYDALKTHAISQL--------EKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARK------ 376 (402)
Q Consensus 311 ey~~rvkkeeQRYqALKaHAEEKL--------e~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQK------ 376 (402)
.|.+++..+-.||+-|-.....-. +.-++|-.-+-.-++.-+-+.++.+|-.-. ++||
T Consensus 10 ~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiiss--------iEqkek~~~~ 81 (227)
T 2o8p_A 10 KYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQ--------EQTKQLNNDE 81 (227)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHSCSCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHH--------HHHHHcCCHH
Confidence 477777777777776654333322 345677777777778888888888874321 2222
Q ss_pred ---------HHHHHHHHHHHHHHHHcccc
Q psy13761 377 ---------TEENAELTSICDDLISKLSS 396 (402)
Q Consensus 377 ---------tKENeELTkICDELIsK~~~ 396 (402)
.|=..||..||++.|.=++.
T Consensus 82 ~~~~i~~yr~kie~EL~~iC~dil~lld~ 110 (227)
T 2o8p_A 82 LVKICSEYVFSLRKDIKAFLQSFEDCVDR 110 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 23346999999999876554
No 48
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=70.06 E-value=52 Score=28.24 Aligned_cols=58 Identities=17% Similarity=0.335 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHH
Q psy13761 223 KLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDV 284 (402)
Q Consensus 223 ~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDL 284 (402)
.+..+|..++.-.++|..-+. ............++.+...++.+...+........+|
T Consensus 26 ~l~~eN~~Lk~e~e~l~~~~~----~~~~~~~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l 83 (155)
T 2oto_A 26 RLRHENKDLKARLENAMEVAG----RDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLA 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666665555543222 2222333445555666666666665555555444333
No 49
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=69.99 E-value=53 Score=28.23 Aligned_cols=42 Identities=7% Similarity=-0.031 Sum_probs=29.3
Q ss_pred HHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhH
Q psy13761 258 KYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMK 299 (402)
Q Consensus 258 ~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyK 299 (402)
.+...|..+.+++...+........+|-.+|..++.....++
T Consensus 29 ~eN~~Lk~e~e~l~~~~~~~~~~~~eL~~~~~~Le~~n~~L~ 70 (155)
T 2oto_A 29 HENKDLKARLENAMEVAGRDFKRAEELEKAKQALEDQRKDLE 70 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 344557777777777777777777788778877766655544
No 50
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=69.28 E-value=58 Score=28.46 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH---------------HHhhHHHHHHhhHHHHHHHH
Q psy13761 312 LEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLK---------------AMLKKSEMQITSLQESLARK 376 (402)
Q Consensus 312 y~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLq---------------A~LKKeEmkv~SLEesLEQK 376 (402)
+..++....++|+.|...|...-.... .+-+..+.......=+. ..+--.+-+-..++..|+..
T Consensus 79 i~~rl~~l~~~~~~L~~~a~~R~~~L~-~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~ 157 (210)
T 3pdy_A 79 YRDCLGRLDLQYAKLLNSSKARLRSLE-SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELK 157 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHh
Confidence 666777778888888877776544443 22222222222111111 11112222445677888888
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy13761 377 TEENAELTSICDDLISK 393 (402)
Q Consensus 377 tKENeELTkICDELIsK 393 (402)
......+..+++.||..
T Consensus 158 ~~~v~~l~~~~~~Ll~~ 174 (210)
T 3pdy_A 158 EKKIKELQNAGDRLLRE 174 (210)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 89999999999999875
No 51
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=67.24 E-value=52 Score=28.41 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy13761 349 EMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSI 386 (402)
Q Consensus 349 eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkI 386 (402)
..|+..|+-.|...++++.++...++...+++.+|.+=
T Consensus 88 ~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 88 DKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677777788888888888888888888888777653
No 52
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=66.62 E-value=50 Score=26.73 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHH
Q psy13761 304 HLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAEL 383 (402)
Q Consensus 304 ~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeEL 383 (402)
.|-...+-|+++|+-++|.-..|-..-..--. ..-..+..-+++++..|+..+--.......|+-+++....+.++|
T Consensus 13 ~LNdRlAsyIdKVR~LEqqN~~Le~~i~~l~~---~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~ 89 (93)
T 3s4r_A 13 ELNDRFANLIDKVRFLEQQNKILLAELEQLKG---QGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRL 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888899999999998888888654432221 234556677888888888888777777777777666655555544
No 53
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=66.52 E-value=97 Score=29.99 Aligned_cols=7 Identities=29% Similarity=0.648 Sum_probs=2.6
Q ss_pred HHHhhHH
Q psy13761 277 SEIAFND 283 (402)
Q Consensus 277 ~EkSFSD 283 (402)
+++.|.+
T Consensus 409 ~~~~~~~ 415 (471)
T 3mq9_A 409 AQKGFQD 415 (471)
T ss_dssp HHHHHHH
T ss_pred HhhhHHH
Confidence 3333333
No 54
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=65.93 E-value=78 Score=28.69 Aligned_cols=80 Identities=8% Similarity=0.104 Sum_probs=46.9
Q ss_pred HHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q psy13761 261 KELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQV---NKYDALKTHAISQLEKA 337 (402)
Q Consensus 261 qkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkee---QRYqALKaHAEEKLe~A 337 (402)
.++.+-.-.+...+.++|.++.||..++ ..+..+...|-+.+..+...+..+. .+-..+.+-.+.++..+
T Consensus 30 ~rlkK~~tEl~k~~~~~E~~~rELq~~~-------~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L 102 (168)
T 3o0z_A 30 VRLRKSHTEMSKSISQLESLNRELQERN-------RILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSL 102 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445556667777777775554 4455566667777777777777664 22233334445566666
Q ss_pred HHHHHHHHHh
Q psy13761 338 NQDLDLRNKT 347 (402)
Q Consensus 338 NEEIaqvrsk 347 (402)
..|+++++..
T Consensus 103 ~~El~~~k~~ 112 (168)
T 3o0z_A 103 QEEVKHLKHN 112 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 55
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=65.36 E-value=8.2 Score=37.05 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHH-------HHHhhHHHH-H-HHHHH
Q psy13761 312 LEEELKKQVNKYDAL----KTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSE-------MQITSLQES-L-ARKTE 378 (402)
Q Consensus 312 y~~rvkkeeQRYqAL----KaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeE-------mkv~SLEes-L-EQKtK 378 (402)
|.+++.++-.||+-| |.-++..-+.-++|-.-+-.-++.-+-+.++.+|-.- .+-.+-... + +-+.|
T Consensus 36 ~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i~~yr~k 115 (261)
T 3ubw_A 36 YQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQM 115 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHHHHHHHH
Confidence 666777777777654 4444444445567777777777777777788887431 100000000 1 11233
Q ss_pred HHHHHHHHHHHHHHcccc
Q psy13761 379 ENAELTSICDDLISKLSS 396 (402)
Q Consensus 379 ENeELTkICDELIsK~~~ 396 (402)
=..||..||+++|.=++.
T Consensus 116 Ie~EL~~iC~dil~lld~ 133 (261)
T 3ubw_A 116 VETELKLICCDILDVLDK 133 (261)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 346899999999876554
No 56
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=64.70 E-value=61 Score=27.00 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=16.3
Q ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHH
Q psy13761 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAEL 383 (402)
Q Consensus 351 E~~aLqA~LKKeEmkv~SLEesLEQKtKENeEL 383 (402)
|+..|+..+-..+..-..+...+....+|.+.|
T Consensus 69 el~~lq~~l~~~~~~~~~l~~~~~~l~~Ek~~L 101 (107)
T 2no2_A 69 ELQVLQGSLETSAQSEANWAAEFAELEKERDSL 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555545555554444444444
No 57
>2ap3_A Conserved hypothetical protein; structural genomics, tetra helix, PSI, protein structure INI midwest center for structural genomics; 1.60A {Staphylococcus aureus subsp} SCOP: a.24.27.1
Probab=64.62 E-value=89 Score=28.87 Aligned_cols=69 Identities=9% Similarity=0.059 Sum_probs=55.2
Q ss_pred HhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy13761 289 ERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKT------HAISQLEKANQDLDLRNKTYEMETTKLKA 357 (402)
Q Consensus 289 EK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKa------HAEEKLe~ANEEIaqvrsk~eaE~~aLqA 357 (402)
+..+.+..-|++...+.-.-...|...|..+.+=|..||. --.+|+...|.-+.++..++..-+..++.
T Consensus 113 kqa~~l~~~~k~RY~~~~~l~~~Y~k~l~~EKeLy~~Lk~k~~~~~~l~eki~~vN~~y~~~~~~FN~yTk~yN~ 187 (199)
T 2ap3_A 113 KEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNK 187 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777888889999999999999999999999999983 46777778888777777776666666654
No 58
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=63.85 E-value=54 Score=26.13 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=15.2
Q ss_pred HhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHH
Q psy13761 346 KTYEMETTKLKAMLKKSEMQITSLQESLARKTEEN 380 (402)
Q Consensus 346 sk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKEN 380 (402)
..+++++..++..+....-++..++..++....+.
T Consensus 67 ~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~ 101 (112)
T 1l8d_A 67 SKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEI 101 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444443333
No 59
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=63.01 E-value=25 Score=33.60 Aligned_cols=84 Identities=18% Similarity=0.292 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHH------H----HH
Q psy13761 312 LEEELKKQVNKYDALKTHAISQ-------LEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQE------S----LA 374 (402)
Q Consensus 312 y~~rvkkeeQRYqALKaHAEEK-------Le~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEe------s----LE 374 (402)
|.+++..+-.||+-+-.....= -+.-++|-.-+-.-++.=+-+.++.+|-.-. ++.-++ . -+
T Consensus 33 ~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiiss-ieqke~~k~~~~~~~~i~~ 111 (260)
T 2npm_A 33 YMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISS-VEQKEHSRNAEDASKMCGK 111 (260)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHH-HHHHhhccCcHHHHHHHHH
Confidence 6666666666776554433322 2345667777777777777777777775421 110000 0 01
Q ss_pred HHHHHHHHHHHHHHHHHHcccc
Q psy13761 375 RKTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 375 QKtKENeELTkICDELIsK~~~ 396 (402)
-+.|=..||..||+++|.=++.
T Consensus 112 yr~kie~EL~~iC~dil~lld~ 133 (260)
T 2npm_A 112 YRSKVEAELTDICNDILTMLDK 133 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHH
Confidence 1223347999999999876554
No 60
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=62.53 E-value=97 Score=28.62 Aligned_cols=115 Identities=20% Similarity=0.145 Sum_probs=61.1
Q ss_pred HhHHHHHHHHHHhHHHh-------------hHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 264 EKEKEEVQLHLRNSEIA-------------FNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHA 330 (402)
Q Consensus 264 lkERDQa~aDLnS~EkS-------------FSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHA 330 (402)
..||..+...+.++++. -+||-+.+.++-....+ -|..|+..+.. ++++...-+||+.--...
T Consensus 65 ~~EK~~Le~ll~~lqtklr~~~~~ppeg~~~~di~~~W~~Le~ae~e---Re~aL~~el~R-lerLe~La~kf~rka~~~ 140 (235)
T 2odv_A 65 EADKNRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILE---REKQLRSEFER-LEALQRIVTKLQMEAGLA 140 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCCCTTCSHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 34555555555554433 23566666665554333 34455555442 355667778888777788
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 331 ISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLI 391 (402)
Q Consensus 331 EEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELI 391 (402)
++.|+.+..-|.. .- ..+... +.+++.+ .++..|..-...+..|..+|++|.
T Consensus 141 e~~L~~~~~~L~~-d~---~~l~~~-~a~k~~e----~ie~dL~~~e~~i~~l~~~a~~L~ 192 (235)
T 2odv_A 141 EEQLNQADALLQS-DV---RLLAAG-KVPQRAG----EVERDLDKADSMIRLLFNDVQTLK 192 (235)
T ss_dssp HHHHHHHHHHHHH-HH---HHTTTT-CCCSCHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hh---hhcchh-HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877777721 11 111111 2233322 334444444444666666666665
No 61
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=62.36 E-value=2e+02 Score=32.07 Aligned_cols=38 Identities=24% Similarity=0.170 Sum_probs=21.9
Q ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy13761 351 ETTKLKAMLKKSEMQITSLQESLARKTEENA-ELTSICDDLIS 392 (402)
Q Consensus 351 E~~aLqA~LKKeEmkv~SLEesLEQKtKENe-ELTkICDELIs 392 (402)
.+.+++|.+||.+.=.. .|..-..... +|..++++|+.
T Consensus 917 dL~~Vqal~KKhea~e~----dl~a~e~ri~~~l~~~a~eL~~ 955 (1010)
T 1g8x_A 917 SITAVQAKLKNLEAFDG----ECQSLEGQSNSDLLSILAQLTE 955 (1010)
T ss_dssp STTTTGGGTTSHHHHTT----TTTHHHHTHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 46778888888876322 2222223344 66666666654
No 62
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=61.97 E-value=1.6e+02 Score=30.84 Aligned_cols=83 Identities=23% Similarity=0.176 Sum_probs=45.6
Q ss_pred HHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 267 KEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNK 346 (402)
Q Consensus 267 RDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrs 346 (402)
..+.+.+|.-+.++-.|+-..||+-.. +.-.+|.+ ..++.....+|+.+-|+.-+.+|.+=+++++..++
T Consensus 11 la~yq~elarvqkana~aka~Ye~~~a--e~~a~n~~--------i~aeNeaikkrNa~aka~Ye~~l~kY~~dlakY~~ 80 (497)
T 3iox_A 11 LTAYQTELARVQKANADAKAAYEAAVA--ANNAANAA--------LTAENTAIKKRNADAKADYEAKLAKYQADLAKYQK 80 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666666666665433 22223332 33444455577777777777777776666665543
Q ss_pred hhHHHHHHHHHHhhHHH
Q psy13761 347 TYEMETTKLKAMLKKSE 363 (402)
Q Consensus 347 k~eaE~~aLqA~LKKeE 363 (402)
+.+..++.|..=|
T Consensus 81 ----~~AeY~~kl~aYe 93 (497)
T 3iox_A 81 ----DLADYPVKLKAYE 93 (497)
T ss_dssp ----HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHH
Confidence 2444555444444
No 63
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=61.19 E-value=81 Score=27.23 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=34.3
Q ss_pred HHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q psy13761 259 YKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQV 320 (402)
Q Consensus 259 eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkee 320 (402)
++-++..+.+.+..++..+++-..+|...-...+.-++..++.-+.|++.+.++..++.+.+
T Consensus 69 El~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 69 DYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555556655555555565555555555555555555555555555555555554
No 64
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=60.89 E-value=1.4e+02 Score=30.07 Aligned_cols=31 Identities=6% Similarity=0.229 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13761 216 EKDKLIEKLKKENASYQKMLNDYENTITQCV 246 (402)
Q Consensus 216 ~~~~~~e~l~~~n~eM~~Im~EYEktI~qlI 246 (402)
+-+..++-++....++-.||.+-..++..+.
T Consensus 232 e~~elleVv~~Da~EL~~V~~eL~~~~~~i~ 262 (413)
T 4hpq_C 232 DAQNLFEIVERDDKDLAAINSLLQDAAIDVA 262 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcchhhHHHHHHHHHHHHHHHH
Confidence 3444455555555555555555555444433
No 65
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=60.23 E-value=76 Score=26.63 Aligned_cols=102 Identities=12% Similarity=0.188 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH---HHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH
Q psy13761 217 KDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKY---KKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV 293 (402)
Q Consensus 217 ~~~~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~e---iqkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke 293 (402)
++..+.++.........--.+++.....++.++..-....+.+ +..+..-++.+.+.-..+|....++..|++...+
T Consensus 18 ~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeeee 97 (129)
T 2fxo_A 18 MKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEE 97 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444445555566666667666655544443222 2223333444444445566666666666666666
Q ss_pred HHHhhHhhHHHHHHHHHHHHHHHHH
Q psy13761 294 IIEGMKANEDHLRARHSELEEELKK 318 (402)
Q Consensus 294 vIegyKkNEE~LKk~ieey~~rvkk 318 (402)
....+...-..+...+.++...+..
T Consensus 98 ~~~~L~~~kkkle~e~~~Lk~~led 122 (129)
T 2fxo_A 98 MNAELTAKKRKLEDECSELKRDIDD 122 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555444444444444444433
No 66
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=59.51 E-value=68 Score=25.88 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=17.3
Q ss_pred HHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH
Q psy13761 259 YKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV 293 (402)
Q Consensus 259 eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke 293 (402)
.++.+..++|.+......+|...-++-.+.++.-+
T Consensus 10 Km~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ 44 (101)
T 3u59_A 10 KMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEE 44 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34445555555555555555544444444444333
No 67
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=58.80 E-value=26 Score=27.97 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.1
Q ss_pred HHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 356 KAMLKKSEMQITSLQESLARKTEENAELTSICDDL 390 (402)
Q Consensus 356 qA~LKKeEmkv~SLEesLEQKtKENeELTkICDEL 390 (402)
...|+.-+..|..|+..|.+|..++.+|..=||.+
T Consensus 32 ~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 32 IEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34466777789999999999999999999999986
No 68
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=57.83 E-value=1e+02 Score=27.41 Aligned_cols=29 Identities=24% Similarity=0.153 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy13761 329 HAISQLEKANQDLDLRNKTYEMETTKLKA 357 (402)
Q Consensus 329 HAEEKLe~ANEEIaqvrsk~eaE~~aLqA 357 (402)
.|+++++.|.++++.+......|+-.|.+
T Consensus 183 kae~el~~ak~~ye~ln~~L~~eLp~l~~ 211 (251)
T 2fic_A 183 KAEEELIKAQKVFEEMNVDLQEELPSLWN 211 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36677777777777666666666666533
No 69
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=57.76 E-value=88 Score=26.64 Aligned_cols=19 Identities=47% Similarity=0.686 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy13761 215 DEKDKLIEKLKKENASYQK 233 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM~~ 233 (402)
++-|..|+.|++++..++.
T Consensus 11 d~rD~~Ie~Lkreie~lk~ 29 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKA 29 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 5567777777776655544
No 70
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=57.74 E-value=1.9e+02 Score=30.33 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy13761 319 QVNKYDALKTHAISQLEKANQDLDLRNKTYEMETT 353 (402)
Q Consensus 319 eeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~ 353 (402)
.+++|..|..+.+..++.+.+.++...+++.....
T Consensus 452 i~~~f~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (695)
T 2j69_A 452 ITDKSAAWTLTAEKDINAAFKELSRSASQYGASYN 486 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36778888888888777766666555555443333
No 71
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=56.96 E-value=1.9e+02 Score=30.20 Aligned_cols=94 Identities=16% Similarity=0.259 Sum_probs=58.6
Q ss_pred hHHHHHhhHhhHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhHHHHHHHHHHhh
Q psy13761 291 SKVIIEGMKANEDHLRARH-------SELEEELKKQVNKYDALKTHAISQL---EKANQDLDLRNKTYEMETTKLKAMLK 360 (402)
Q Consensus 291 ~KevIegyKkNEE~LKk~i-------eey~~rvkkeeQRYqALKaHAEEKL---e~ANEEIaqvrsk~eaE~~aLqA~LK 360 (402)
..+|+..|-++.+.....| .+++..+..+..|-++..+.++.-- ..-.+-+.+-+++|+..+..|..++.
T Consensus 457 ~~~vl~~fl~~~~~~~~~ilq~d~~l~~~~k~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~ql~~kme 536 (592)
T 1f5n_A 457 AEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKME 536 (592)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3477888888888777777 4566677777777776654443222 22233355666777777777777554
Q ss_pred HHH-HHHhhHHHHHHHHHHHHHHHH
Q psy13761 361 KSE-MQITSLQESLARKTEENAELT 384 (402)
Q Consensus 361 KeE-mkv~SLEesLEQKtKENeELT 384 (402)
++. .-++-.++.|+.|-+|-++|.
T Consensus 537 ~~~~~~~~e~~~~~~~~~~~~~~~~ 561 (592)
T 1f5n_A 537 NDRVQLLKEQERTLALKLQEQEQLL 561 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 334556777777777755554
No 72
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=56.81 E-value=67 Score=25.99 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=20.5
Q ss_pred HHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH
Q psy13761 258 KYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV 293 (402)
Q Consensus 258 ~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke 293 (402)
.++..++.|+.++.+.=|.+...=.||..|-+-+-.
T Consensus 9 kevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~ 44 (77)
T 2w83_C 9 REVENLILENTQLLETKNALNIVKNDLIAKVDELTC 44 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445556666666666666666555566555544433
No 73
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=56.56 E-value=52 Score=26.11 Aligned_cols=43 Identities=12% Similarity=0.199 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKT 347 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk 347 (402)
|...+.+.+.++...-+.|+..-.+-+..|..+..+++...+.
T Consensus 15 Le~~l~e~E~~~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~E 57 (86)
T 1x8y_A 15 KEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDE 57 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333344444444444444444444443333
No 74
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=56.54 E-value=16 Score=34.40 Aligned_cols=83 Identities=17% Similarity=0.255 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHH---HH--------hhHHHHHHHH
Q psy13761 312 LEEELKKQVNKYDAL----KTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEM---QI--------TSLQESLARK 376 (402)
Q Consensus 312 y~~rvkkeeQRYqAL----KaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEm---kv--------~SLEesLEQK 376 (402)
|.+++..+-.||+-+ |.-++..-+.-++|-.-+-.-++.=+-+.++.+|-.-. +- ..+-+. -+
T Consensus 13 ~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i~~--yr 90 (236)
T 3iqu_A 13 QKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVRE--YR 90 (236)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHHHH--HH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHHHH--HH
Confidence 667777777788654 44444444456677777777777778888888875311 00 001111 12
Q ss_pred HHHHHHHHHHHHHHHHcccc
Q psy13761 377 TEENAELTSICDDLISKLSS 396 (402)
Q Consensus 377 tKENeELTkICDELIsK~~~ 396 (402)
.|=..||..||+++|.=++.
T Consensus 91 ~kie~EL~~iC~dil~lld~ 110 (236)
T 3iqu_A 91 EKVETELQGVCDTVLGLLDS 110 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 23346899999998876554
No 75
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=56.45 E-value=46 Score=29.28 Aligned_cols=26 Identities=23% Similarity=0.252 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy13761 326 LKTHAISQLEKANQDLDLRNKTYEME 351 (402)
Q Consensus 326 LKaHAEEKLe~ANEEIaqvrsk~eaE 351 (402)
++..|+......+.|++.+-..-=.|
T Consensus 61 ~R~~aE~~~~~ie~ElE~LTasLFeE 86 (135)
T 2e7s_A 61 LRTKAEEEADKLNKEVEDLTASLFDE 86 (135)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555554443333
No 76
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=56.16 E-value=20 Score=30.75 Aligned_cols=41 Identities=7% Similarity=0.189 Sum_probs=34.4
Q ss_pred HHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q psy13761 356 KAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 356 qA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~~ 396 (402)
.+++++.+-++.-.+..++++.++.+.|.+.|+++|..+..
T Consensus 91 ~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i~~ 131 (132)
T 1ykh_B 91 LRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDFVD 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35677777788888888999999999999999999987754
No 77
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=55.84 E-value=1.8e+02 Score=29.82 Aligned_cols=50 Identities=16% Similarity=0.042 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhH-------HHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 333 QLEKANQDLDLRNKTYE-------METTKLKAMLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 333 KLe~ANEEIaqvrsk~e-------aE~~aLqA~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
+.+.++++|.+..++-+ .+..+|.+.++...-++..|+.++.+...+..+
T Consensus 92 ~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~ 148 (501)
T 1wle_A 92 EKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYL 148 (501)
T ss_dssp HHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777655432 366677777777777777776666666555543
No 78
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=55.14 E-value=1e+02 Score=26.58 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=11.2
Q ss_pred HHHHHHHhhHHHHHHHHHHhhHHHH
Q psy13761 340 DLDLRNKTYEMETTKLKAMLKKSEM 364 (402)
Q Consensus 340 EIaqvrsk~eaE~~aLqA~LKKeEm 364 (402)
++.++-++++.-...|...+++.+.
T Consensus 72 eY~~L~KkYk~~~~~Ld~eI~~qe~ 96 (119)
T 2avr_X 72 QYQELASKYEDALKKLEAEMEQQKA 96 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444433
No 79
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=54.62 E-value=98 Score=26.18 Aligned_cols=56 Identities=11% Similarity=0.080 Sum_probs=29.8
Q ss_pred hHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 276 NSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQ 339 (402)
Q Consensus 276 S~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANE 339 (402)
.+..-...|..||.++++.+.. -+..+++.. .+.+..+....+..+..++...|..
T Consensus 26 ~I~~r~~~l~~rw~~L~~~a~~-------R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~ 81 (161)
T 3lbx_A 26 EIQERRQEVLTRYQSFKERVAE-------RGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTD 81 (161)
T ss_dssp TGGGHHHHGGGHHHHHHHHHHH-------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccC
Confidence 3444444555566665555444 233333333 3455566666666677776666653
No 80
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=54.16 E-value=1.9e+02 Score=29.23 Aligned_cols=29 Identities=21% Similarity=0.216 Sum_probs=21.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy13761 365 QITSLQESLARKTEENAELTSICDDLISK 393 (402)
Q Consensus 365 kv~SLEesLEQKtKENeELTkICDELIsK 393 (402)
+-+.|+.+|+-.......+....+.||..
T Consensus 134 khq~l~~EL~~~e~~i~~v~~~G~~Li~~ 162 (450)
T 3r6n_A 134 AFSIRMSQLEVKEKELNKLKQESDQLVLN 162 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHchHHHHHHHHHHHHHHHc
Confidence 44567777777777778888888888753
No 81
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=53.99 E-value=1.6e+02 Score=28.59 Aligned_cols=55 Identities=9% Similarity=0.210 Sum_probs=43.1
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHhHHHHHH-HHHHhHHHhhHHHHHHHHhhHHHH
Q psy13761 241 TITQCVNQRENDKKQFEKYKKELEKEKEEVQ-LHLRNSEIAFNDVHLKYERSKVII 295 (402)
Q Consensus 241 tI~qlIeE~eq~k~~~~~eiqkllkERDQa~-aDLnS~EkSFSDLhrRYEK~KevI 295 (402)
-+..++.+.++.++.+.....++.+++.... .+|...-+.|...++-+++.+.-.
T Consensus 102 ~l~~~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~ 157 (406)
T 4dyl_A 102 KLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKY 157 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777777788888888999998888 888888888888888887777543
No 82
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=53.42 E-value=79 Score=24.74 Aligned_cols=42 Identities=12% Similarity=0.283 Sum_probs=30.0
Q ss_pred hHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 291 SKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAIS 332 (402)
Q Consensus 291 ~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEE 332 (402)
..++...+.++-+.+...++.+...+...+.++..|+.+..+
T Consensus 63 ~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 63 KDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777777777777777777777766544
No 83
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=52.72 E-value=82 Score=24.74 Aligned_cols=47 Identities=13% Similarity=0.325 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13761 302 EDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTY 348 (402)
Q Consensus 302 EE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~ 348 (402)
-.+|...+.+...+....-+.|+..-.+-+..|..+..++++..+.+
T Consensus 10 ~~sLE~~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EY 56 (84)
T 1gk4_A 10 NESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREY 56 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555555555555555555555555555555555555544444
No 84
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=52.41 E-value=25 Score=31.01 Aligned_cols=42 Identities=10% Similarity=0.173 Sum_probs=35.6
Q ss_pred HHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccccc
Q psy13761 356 KAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSSC 397 (402)
Q Consensus 356 qA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~~~ 397 (402)
.+++++.+-++.-.+.+++++.++.+.|.+.|+++|..+..+
T Consensus 91 ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~ia~~ 132 (151)
T 1yke_B 91 LRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDFVDG 132 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777888888889999999999999999999988653
No 85
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=51.71 E-value=1.1e+02 Score=27.79 Aligned_cols=10 Identities=40% Similarity=0.468 Sum_probs=6.8
Q ss_pred cccccccccc
Q psy13761 163 SAKLLGTSEL 172 (402)
Q Consensus 163 ~~~llg~~~~ 172 (402)
...+||.|.+
T Consensus 62 dn~~Lg~f~l 71 (219)
T 4e81_A 62 DNKSLGQFNL 71 (219)
T ss_dssp GSEEEEEEEE
T ss_pred cCCEEEEEEE
Confidence 4467888864
No 86
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=51.55 E-value=34 Score=27.50 Aligned_cols=39 Identities=33% Similarity=0.440 Sum_probs=33.1
Q ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLIS 392 (402)
Q Consensus 351 E~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIs 392 (402)
-+++|+-.|+--+.++..|++.+.-|.|..+ ++-||||+
T Consensus 19 ~l~~Lr~eL~~Ke~eI~~L~e~i~lk~kd~E---rLNDEiis 57 (75)
T 3a7o_A 19 TLAILQKELKSKEQEIRRLKEVIALKNKNTE---RLNDELIS 57 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---HhhHHHHH
Confidence 5678888999999999999999999988765 55788886
No 87
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=51.27 E-value=21 Score=30.31 Aligned_cols=50 Identities=18% Similarity=0.126 Sum_probs=40.4
Q ss_pred HhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 279 IAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKT 328 (402)
Q Consensus 279 kSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKa 328 (402)
.++..+..++..++++..-++.+.+.+...++.+.++++..+.+...|+.
T Consensus 4 ~A~~~~~~~~~~l~~~a~~Lk~~~~~l~~~v~~l~~e~k~l~ke~~~l~~ 53 (171)
T 2zvf_A 4 AAIEAVEEMERLLREASSILRVEPAKLPKTVERFFEEWKDQRKEIERLKS 53 (171)
T ss_dssp GGTHHHHHHHHHHHHHHHTTTCCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999999988777888888877777777766666654
No 88
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=50.98 E-value=1.4e+02 Score=30.16 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 332 SQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 332 EKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
.+.+.++++|.+.+++ ..+..+|.+..+...-++..|+.++.+...+..+
T Consensus 52 ~~~n~~sk~i~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (455)
T 2dq0_A 52 HERNKIAVEIGKRRKK-GEPVDELLAKSREIVKRIGELENEVEELKKKIDY 101 (455)
T ss_dssp HHHHHHHHHHHHHHTS-CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777775543 2455667777666666666666665555554433
No 89
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=50.63 E-value=1.4e+02 Score=26.92 Aligned_cols=39 Identities=10% Similarity=0.159 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhH
Q psy13761 254 KQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSK 292 (402)
Q Consensus 254 ~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~K 292 (402)
+.......++.+.......+|...-+.|..+.+.++..+
T Consensus 117 K~~~~~~~k~~k~~~~~~~~l~kaKk~Y~~~c~e~~~a~ 155 (290)
T 3i2w_A 117 KDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTERSAT 155 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555555555555555555444443
No 90
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=50.54 E-value=1.1e+02 Score=28.96 Aligned_cols=88 Identities=23% Similarity=0.403 Sum_probs=50.0
Q ss_pred HhhHHHHHH---HHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy13761 279 IAFNDVHLK---YERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKL 355 (402)
Q Consensus 279 kSFSDLhrR---YEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aL 355 (402)
--|-|+|+. .-++-+-|..|.+--|+||....+ ..+..-+|+-.|-... .|++-| ++
T Consensus 88 vryldihkhgreiarllekiqkyfQ~IEtlK~ql~n----f~e~RLiYDHYKlKvd-ELEK~~---------------Kd 147 (294)
T 3caz_A 88 VRYLDIHKHGREIARLLEKIQKYRQEIEEIKKEYKE----TDKYRERYDHYKVKLD-NLEKKN---------------KD 147 (294)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-HHHHHT---------------CC
T ss_pred hhhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHhHH-HHHhcc---------------ch
Confidence 445555543 223344455555555666665553 3344556655443221 122211 56
Q ss_pred HHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q psy13761 356 KAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 356 qA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~~ 396 (402)
+-+++|.|.++.+-+-.- ..+|-|+|++|..
T Consensus 148 SeKI~RNQsKLssAEtaY----------kqvcsDiInkMnk 178 (294)
T 3caz_A 148 QERIERNQQKFKDAEAAY----------SSVCADLIQKMET 178 (294)
T ss_dssp HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHH
T ss_pred HHHHHHhHHHhhhHHHHH----------HHHHHHHHHHHHH
Confidence 777888888887765543 3579999999976
No 91
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=50.33 E-value=38 Score=26.07 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q psy13761 348 YEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDD 389 (402)
Q Consensus 348 ~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDE 389 (402)
.+..+.+|+-..-..--+|+-|+.+.-+|.+||+-|.++--+
T Consensus 9 se~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 9 SERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555555556678889999999999999999987543
No 92
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=49.98 E-value=1.1e+02 Score=29.24 Aligned_cols=84 Identities=18% Similarity=0.284 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHH------HH----HH
Q psy13761 312 LEEELKKQVNKYDALKTHAISQL------EKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQE------SL----AR 375 (402)
Q Consensus 312 y~~rvkkeeQRYqALKaHAEEKL------e~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEe------sL----EQ 375 (402)
|.+++..+-.||+-+-....+=. +.-++|-.-+-.-++.-+-+-++.+|-.-. ++.-++ .+ +-
T Consensus 13 ~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiiss-ieqke~~k~~~~~~~~i~~y 91 (260)
T 1o9d_A 13 YMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISS-IEQKEESRGNEEHVNSIREY 91 (260)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHH-HHHHhhccCcHHHHHHHHHH
Confidence 66677777777766554433322 234567777777777777777777765321 110000 00 01
Q ss_pred HHHHHHHHHHHHHHHHHcccc
Q psy13761 376 KTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 376 KtKENeELTkICDELIsK~~~ 396 (402)
+.|=..||..||+++|.=++.
T Consensus 92 r~kie~EL~~iC~dil~lld~ 112 (260)
T 1o9d_A 92 RSKIENELSKICDGILKLLDA 112 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHH
Confidence 223347999999999875544
No 93
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=49.82 E-value=1.4e+02 Score=26.48 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHH---HHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH
Q psy13761 237 DYENTITQCVNQRENDKKQFEKYK---KELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV 293 (402)
Q Consensus 237 EYEktI~qlIeE~eq~k~~~~~ei---qkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke 293 (402)
+...-+..+..+..+..+.+.... .++.++......+|...-+.|....+.+|+.+.
T Consensus 98 ~~~~~l~~~~~~~~~~rK~~~~~~~~~~~~~~~~~~~~~~l~Kak~~Y~~~c~e~e~~~~ 157 (276)
T 2v0o_A 98 ELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKK 157 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333445555555555555554442 356666666666666666667777776766553
No 94
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=49.79 E-value=91 Score=25.43 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=39.5
Q ss_pred HHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy13761 295 IEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYE 349 (402)
Q Consensus 295 IegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~e 349 (402)
|.++++--..|...+.+.+.++..+-..|++.-.+-+..|..+..++++....++
T Consensus 14 ~~~Lq~~~~~LE~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq 68 (95)
T 3mov_A 14 YFQGQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYE 68 (95)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556655567788888888888888888888888888888888877777766664
No 95
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=49.74 E-value=1e+02 Score=25.01 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=43.4
Q ss_pred HHHHHHHHhh-HHHHHhhHhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH----HHH
Q psy13761 282 NDVHLKYERS-KVIIEGMKANEDHLRARHSELEEELKKQ---VNKYDALKTHAISQLEKANQDLDLRNKTYEM----ETT 353 (402)
Q Consensus 282 SDLhrRYEK~-KevIegyKkNEE~LKk~ieey~~rvkke---eQRYqALKaHAEEKLe~ANEEIaqvrsk~ea----E~~ 353 (402)
++||..||.. +.++.+ + .....++... ++|-++++ +++..|+.|.+=|.++.-.... .=.
T Consensus 14 SelFe~YE~df~~l~~~-------i----~~kl~~i~~~~~~e~rk~~i~-~ie~~ldEA~eLl~qMelE~r~~p~s~R~ 81 (102)
T 2qyw_A 14 SEHFEKLHEIFRGLLED-------L----QGVPERLLGTAGTEEKKKLVR-DFDEKQQEANETLAEMEEELRYAPLTFRN 81 (102)
T ss_dssp HHHHHHHHHHHHHHHHH-------H----HHHHHHHHTCCCSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-------H----HHHHHHhcccCCcHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 6888888863 222222 2 2222233322 56666655 8888888888888885544332 333
Q ss_pred HHHHHhhHHHHHHhhHHH
Q psy13761 354 KLKAMLKKSEMQITSLQE 371 (402)
Q Consensus 354 aLqA~LKKeEmkv~SLEe 371 (402)
.++++||--...+.+|..
T Consensus 82 ~~~~klr~Yk~dL~~lk~ 99 (102)
T 2qyw_A 82 PMMSKLRNYRKDLAKLHR 99 (102)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455555555555554444
No 96
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=48.73 E-value=93 Score=24.17 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHH
Q psy13761 347 TYEMETTKLKAMLKKSEMQITSLQESLARKTEENA 381 (402)
Q Consensus 347 k~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENe 381 (402)
+...++.+|+-.++-.+-.+...++.|...+...+
T Consensus 38 ~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLe 72 (81)
T 1ic2_A 38 QLEDELVALQKKLKGTEDELDKYSESLKDAQEKLE 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555444444444444433
No 97
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=48.64 E-value=1.8e+02 Score=28.85 Aligned_cols=66 Identities=18% Similarity=0.096 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 314 EELKKQVNKYDALKTHAIS---QLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 314 ~rvkkeeQRYqALKaHAEE---KLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
+.|...-+++.++...+++ +.+.++++|.+ +...+..+|.+..+...-++..|+.++.+...+..+
T Consensus 28 ~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (421)
T 1ses_A 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPK---APPEEKEALIARGKALGEEAKRLEEALREKEARLEA 96 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444433332 33444555554 333556677777777666666666666665555443
No 98
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=48.40 E-value=2.1e+02 Score=28.26 Aligned_cols=44 Identities=5% Similarity=-0.055 Sum_probs=22.3
Q ss_pred HHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy13761 350 METTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISK 393 (402)
Q Consensus 350 aE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK 393 (402)
.++.++...++..-..+.+.+..++.+.++...+...++.++..
T Consensus 288 ~~l~~~~~~~~~~l~~l~~~~~~l~~l~~~~~~~~~~~~~~~~~ 331 (517)
T 4ad8_A 288 EDVVEFGAQAAEELAGLEEDERDAGSLQADVDALHAELLKVGQA 331 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444555555555555555555555554443
No 99
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=48.35 E-value=1.3e+02 Score=25.81 Aligned_cols=84 Identities=13% Similarity=0.206 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh----H--HHHHHhhHHHHHHHHHH
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLK----K--SEMQITSLQESLARKTE 378 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LK----K--eEmkv~SLEesLEQKtK 378 (402)
|+.--++|..-..++.+||...++.|+.-=...++. ..++.+....+..+++.-+ + ..-.+..++..+.+..+
T Consensus 11 l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~-~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~~keLd~ 89 (119)
T 3etw_A 11 LQALDAEYQNLANQEEARFNEERAQADAARQALAQN-EQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDALKKLEA 89 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 444455666667788888888887777643333332 4444445555555544321 1 22345566777777788
Q ss_pred HHHHHHHHHHH
Q psy13761 379 ENAELTSICDD 389 (402)
Q Consensus 379 ENeELTkICDE 389 (402)
+....++|-|.
T Consensus 90 ~ik~qekiIdn 100 (119)
T 3etw_A 90 EMEQQKAVISD 100 (119)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888774
No 100
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=48.17 E-value=50 Score=24.62 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy13761 349 EMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSIC 387 (402)
Q Consensus 349 eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkIC 387 (402)
+..+.+|+-..-..-++|.-|+.+...+++||+-|.++-
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 344556666666677888888888888888888888764
No 101
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=47.62 E-value=1.1e+02 Score=24.76 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 305 LRARHSELEEELKKQVNKYDALKT 328 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKa 328 (402)
|-..|+...+.|.-.+-....||.
T Consensus 11 LE~KIq~avdtI~lLqmEieELKe 34 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKE 34 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666666666666666664
No 102
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=46.37 E-value=77 Score=25.85 Aligned_cols=43 Identities=12% Similarity=0.253 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHH
Q psy13761 338 NQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELT 384 (402)
Q Consensus 338 NEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELT 384 (402)
.+|+.+++ +...+++-.|+-.+.++.+|...++++.++.+||-
T Consensus 30 ~EELs~vr----~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq 72 (81)
T 1wt6_A 30 SREMEAIR----TDNQNFASQLREAEARNRDLEAHVRQLQERMELLQ 72 (81)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444 44556667888999999999999999999999863
No 103
>3qf7_D MRE11; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima}
Probab=45.97 E-value=21 Score=26.46 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=28.8
Q ss_pred hhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q psy13761 280 AFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQV 320 (402)
Q Consensus 280 SFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkee 320 (402)
-|++||+-|-|-++ +|-|.|-+-..++.+.|++.+
T Consensus 8 d~felfkey~k~r~------~~he~l~k~~~ell~evkkse 42 (50)
T 3qf7_D 8 DYFELFKEYLKKRE------ENHEKLLKILDELLDEVKKSE 42 (50)
T ss_dssp CHHHHHHHHHHHHC------TTHHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHHhh
Confidence 48999999988775 688889999999999888765
No 104
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=45.75 E-value=72 Score=24.00 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=30.2
Q ss_pred HHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy13761 342 DLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSI 386 (402)
Q Consensus 342 aqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkI 386 (402)
.+.+.+-..+...|...+...+.++..|...+.+...|+.-|-.+
T Consensus 15 ~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 15 TRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666777777777777777777777777777666543
No 105
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=45.30 E-value=1.4e+02 Score=25.36 Aligned_cols=82 Identities=15% Similarity=0.005 Sum_probs=44.4
Q ss_pred HHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 259 YKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKAN 338 (402)
Q Consensus 259 eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~AN 338 (402)
+..++..+..|+..+|.++-+-+.+|-.- .++.-+..++-=..|...++..+..+...++.|-..|..+.++|....
T Consensus 7 ~~~~lq~~~~ql~~qL~k~~~~r~~Le~~---w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt 83 (112)
T 1x79_B 7 QVKKLQLMLRQANDQLEKTMKDKQELEDF---IKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMAVLM 83 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556666666666665555555433 233333444444455555555666666666666666666665555544
Q ss_pred HHHHH
Q psy13761 339 QDLDL 343 (402)
Q Consensus 339 EEIaq 343 (402)
..-.+
T Consensus 84 ~~Re~ 88 (112)
T 1x79_B 84 QSREQ 88 (112)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 106
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=45.20 E-value=60 Score=32.75 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q psy13761 230 SYQKMLNDYENTITQCVNQR 249 (402)
Q Consensus 230 eM~~Im~EYEktI~qlIeE~ 249 (402)
.+...|..||+.|..-+.+.
T Consensus 24 ~i~d~L~k~e~~V~~~l~~L 43 (409)
T 1m1j_C 24 GIADFFNKYRLTTDGELLEI 43 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcchhHHHHH
Confidence 45667778888777766553
No 107
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=45.19 E-value=72 Score=31.03 Aligned_cols=87 Identities=14% Similarity=0.212 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHH
Q psy13761 301 NEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEEN 380 (402)
Q Consensus 301 NEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKEN 380 (402)
+-+.|++.+..+...+.+.+++-+. +-+.|..-...+..=.+........|+..|.-..-.+..|+.++++..++.
T Consensus 117 d~~~l~~~L~~L~~~i~~~q~~~~~----~~~~L~~F~~~l~~d~~~f~~~~~~l~~~L~~~~~~I~~Lq~eI~~l~~~I 192 (346)
T 2nrj_A 117 DGETLKEGITDLRGEIQQNQKYAQQ----LIEELTKLRDSIGHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVLGSV 192 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhHhhHHhHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence 3344555554444444444433333 334444455555555556666677777777777777777888888888777
Q ss_pred HHHHHHHHHHH
Q psy13761 381 AELTSICDDLI 391 (402)
Q Consensus 381 eELTkICDELI 391 (402)
.....++...+
T Consensus 193 ~~~~~~i~~~~ 203 (346)
T 2nrj_A 193 NYYKQLESDGF 203 (346)
T ss_dssp CGGGCCC--CC
T ss_pred HHHHHHHhccc
Confidence 76666554443
No 108
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=44.48 E-value=1.2e+02 Score=24.08 Aligned_cols=45 Identities=24% Similarity=0.289 Sum_probs=33.0
Q ss_pred hHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 291 SKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLE 335 (402)
Q Consensus 291 ~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe 335 (402)
..+++..+.++-+.+...++.+...+...+.++..|+.+..+.+.
T Consensus 68 ~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~~~~ 112 (117)
T 2zqm_A 68 KDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQSALR 112 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 455667777777777778888888888888888887777766653
No 109
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=44.36 E-value=1e+02 Score=23.43 Aligned_cols=110 Identities=10% Similarity=0.067 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhh
Q psy13761 222 EKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKAN 301 (402)
Q Consensus 222 e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkN 301 (402)
.+.+....+|..-|.+-|..+...-. . . ..-..++..+..-..+..++.+-+..+..+...-.++-. .-.-+
T Consensus 5 ~~F~~~l~el~~WL~~~e~~l~~~~~-~---~-~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~---~~~~~ 76 (119)
T 3uun_A 5 DRYQTALEEVLSWLLSAEDTLQAQGE-I---S-NDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIG---TGKLS 76 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCS-C---C-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-C---C-CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH---cCCCC
Confidence 34455566666666666666554211 0 0 113456667777777788877777777777655544422 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 302 EDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDL 343 (402)
Q Consensus 302 EE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaq 343 (402)
.........++....+||..|...+.+.-.....-+.+
T Consensus 77 ----~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~ 114 (119)
T 3uun_A 77 ----EDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMD 114 (119)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234466778888899999998888776666555443
No 110
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=44.08 E-value=1.2e+02 Score=24.09 Aligned_cols=25 Identities=16% Similarity=0.286 Sum_probs=11.0
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhh
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAF 281 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSF 281 (402)
..++.++...+..+...+..+++..
T Consensus 16 ~~~l~~L~~~~~~l~~~i~~l~~~l 40 (112)
T 1l8d_A 16 EEERNEITQRIGELKNKIGDLKTAI 40 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444443
No 111
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=43.85 E-value=66 Score=28.42 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhh
Q psy13761 326 LKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITS 368 (402)
Q Consensus 326 LKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~S 368 (402)
++.-..+--..+|.+|+.++..+.+++..|++.+...+-.++.
T Consensus 28 l~r~~~~i~~~~n~eI~~ik~~~~~~~~~l~~~i~~l~~~l~~ 70 (171)
T 2p2u_A 28 IDRKVGEIEAQMNEAIDAAKARASQKSAPLLARRKELEDGVAT 70 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334445579999999999999888888877766655443
No 112
>3teq_A Stromal interaction molecule 1; signaling protein; 1.90A {Homo sapiens}
Probab=43.82 E-value=1.5e+02 Score=25.01 Aligned_cols=69 Identities=19% Similarity=0.168 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH----HhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 314 EELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKA----MLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 314 ~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA----~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
-..+.+.+.|..=|..|+.+|..|.+..++++++...=+-.++. ++--..-+|-++...|.+-+.+..|
T Consensus 10 ~T~e~E~q~~~~kk~~aekql~~A~e~~eKl~KKrsS~~gs~~~ahs~slD~vD~~Il~Ak~aL~evt~~l~E 82 (101)
T 3teq_A 10 LTHEVEVQYYNIKKQNAEKQLMVAKEGAEKIKKKRNTLFGTFHVAHSSSLDDVDHKILTAKQALSEATAALRE 82 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHTCGGGGGTTCHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhhhchheeeehhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677889999999999999999999999999997766555543 2333334444555555555544444
No 113
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=42.85 E-value=3.1e+02 Score=28.56 Aligned_cols=126 Identities=11% Similarity=0.132 Sum_probs=66.9
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEK 336 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ 336 (402)
-..++.+++..++...++.+.+..+..+...=+.+.. .++-. ......++....+|++.|+..+...-.+
T Consensus 403 l~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~--~~~~~--------~~~I~~~~~~l~~~W~~L~~~~~~R~~~ 472 (863)
T 1sjj_A 403 LSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNE--LDYYD--------SPSVNARCQKICDQWDNLGALTQKRREA 472 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH--TCCTT--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCccc--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567778888888888888888777777655444442 12111 1334455556666666666666543333
Q ss_pred HHHH------HHHHHHhhHHHHHHHHHHhhH-------------------HHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 337 ANQD------LDLRNKTYEMETTKLKAMLKK-------------------SEMQITSLQESLARKTEENAELTSICDDLI 391 (402)
Q Consensus 337 ANEE------Iaqvrsk~eaE~~aLqA~LKK-------------------eEmkv~SLEesLEQKtKENeELTkICDELI 391 (402)
..+. ++++...+...+..+..=+.. ..-+...++..|+....+...++.++++|.
T Consensus 473 L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~ 552 (863)
T 1sjj_A 473 LERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVS 552 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3222 222222322222222221111 112223355566666666777788888776
Q ss_pred H
Q psy13761 392 S 392 (402)
Q Consensus 392 s 392 (402)
.
T Consensus 553 ~ 553 (863)
T 1sjj_A 553 K 553 (863)
T ss_dssp H
T ss_pred H
Confidence 5
No 114
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=42.14 E-value=26 Score=23.98 Aligned_cols=29 Identities=24% Similarity=0.436 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHhhHHHHHHhhHHHHHHHH
Q psy13761 348 YEMETTKLKAMLKKSEMQITSLQESLARK 376 (402)
Q Consensus 348 ~eaE~~aLqA~LKKeEmkv~SLEesLEQK 376 (402)
.+.++..|++.+.+.|-++.-|+++++.|
T Consensus 4 lee~~r~l~~ivq~lq~r~drle~tvqak 32 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLEETVQAK 32 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45678888999999999998888887653
No 115
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=41.84 E-value=48 Score=34.36 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=0.0
Q ss_pred HhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHH
Q psy13761 346 KTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAEL 383 (402)
Q Consensus 346 sk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeEL 383 (402)
.....|-..|.+.++..++.+.-|.+..+.+..|..+|
T Consensus 401 ~~~~~e~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 438 (575)
T 2i1j_A 401 NMEAAERQKLEDEIRAKQEEVSRIQQEVELKDSETRRL 438 (575)
T ss_dssp --------------------------------------
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455556677777777777777777777777666555
No 116
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=41.45 E-value=3.3e+02 Score=28.40 Aligned_cols=48 Identities=4% Similarity=0.077 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHhhHHHHHHHHHHhhHHH
Q psy13761 316 LKKQVNKYDALKTHAISQLEKANQDLD------LRNKTYEMETTKLKAMLKKSE 363 (402)
Q Consensus 316 vkkeeQRYqALKaHAEEKLe~ANEEIa------qvrsk~eaE~~aLqA~LKKeE 363 (402)
+....+||+.|...+.+.-....+.++ ++...+..++..+..-++..+
T Consensus 573 ~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~~Wi~e~e 626 (863)
T 1sjj_A 573 PQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKM 626 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777777777777666666554 444455444444444444433
No 117
>2x7r_B Transmembrane protein GP41; envelope glycoprotein, membrane anchored fusion protein, viral protein; 2.00A {Human immunodeficiency virus type 1LW12}
Probab=40.63 E-value=69 Score=24.56 Aligned_cols=37 Identities=19% Similarity=0.416 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q psy13761 227 ENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKEL 263 (402)
Q Consensus 227 ~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkl 263 (402)
+-.+..+=++.|..+|+.++++.+.+++..+.++..+
T Consensus 7 TW~qWekeI~nyt~~Iy~LLe~sq~qqekNe~~Ll~L 43 (63)
T 2x7r_B 7 DKMEWDREINNYTSLIHSLIEESQNQQEKNEQELLEL 43 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3445566678999999999999876666555555443
No 118
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=40.40 E-value=1.9e+02 Score=25.37 Aligned_cols=44 Identities=18% Similarity=0.250 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHh---hHHHHHHHHHHhhHHHHHHhhHHHHHHHH
Q psy13761 333 QLEKANQDLDLRNKT---YEMETTKLKAMLKKSEMQITSLQESLARK 376 (402)
Q Consensus 333 KLe~ANEEIaqvrsk---~eaE~~aLqA~LKKeEmkv~SLEesLEQK 376 (402)
-.+.||+-.+..++. .+.....|++.++-.+..+.+++.+|...
T Consensus 83 LFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~e~ll~~lq~QL~~L 129 (135)
T 2e7s_A 83 LFDEANNLVADARMEKYAIEILNKRLTEQLREKDMLLDTLTLQLKNL 129 (135)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTTHHHHCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455544443322 34445677788888888888887777543
No 119
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=40.26 E-value=33 Score=27.76 Aligned_cols=32 Identities=25% Similarity=0.192 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 300 ANEDHLRARHSELEEELKKQVNKYDALKTHAI 331 (402)
Q Consensus 300 kNEE~LKk~ieey~~rvkkeeQRYqALKaHAE 331 (402)
+.=|.||..|.++++++.+.+....-||.+|.
T Consensus 15 EEVevLKe~I~EL~e~~~qLE~EN~~Lk~~as 46 (78)
T 1dip_A 15 EEVEILKEQIRELVEKNSQLERENTLLKTLAS 46 (78)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33478999999999999999999999998873
No 120
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=40.26 E-value=1.7e+02 Score=24.80 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 220 LIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 220 ~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK 290 (402)
....|+..+..+..=+++|-.-..+.-.+.-.....++.++..+...++.+...+..+|..=.||=+...-
T Consensus 4 ~~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~ 74 (111)
T 2v66_B 4 RNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRA 74 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34455555555555566665555554444444555567888888888888888888888877776544433
No 121
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=40.18 E-value=2e+02 Score=25.68 Aligned_cols=23 Identities=4% Similarity=0.039 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 316 LKKQVNKYDALKTHAISQLEKAN 338 (402)
Q Consensus 316 vkkeeQRYqALKaHAEEKLe~AN 338 (402)
.+..-+|+.+=|...-++|+.||
T Consensus 126 N~~LV~RWM~rk~qEAe~MN~an 148 (152)
T 3a7p_A 126 HSQLVARWLKKTEKETEAMNSEI 148 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444555555666666666655
No 122
>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2
Probab=40.15 E-value=97 Score=28.37 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 301 NEDHLRARHSELEEELKKQ-VNKYDALKTHAISQLEKANQDLDLRNK 346 (402)
Q Consensus 301 NEE~LKk~ieey~~rvkke-eQRYqALKaHAEEKLe~ANEEIaqvrs 346 (402)
|++.|+..+.+|-++|.+. ++||+. +.++.+-.-||..++.
T Consensus 59 se~~L~e~ckELh~~I~~LEeEKYDl-----E~kvkkqdyEI~dL~~ 100 (180)
T 1j1e_C 59 GFAELQDLARQLHARVDKVDEERYDI-----EAKVTKNITEIADLTQ 100 (180)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhH-----HHHHHhcchhHHHHHH
Confidence 8888999999999987776 788984 3344444444444443
No 123
>3tkl_B LIDA protein, substrate of the DOT/ICM system; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Legionella pneumophila}
Probab=40.06 E-value=79 Score=30.29 Aligned_cols=57 Identities=28% Similarity=0.413 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhh
Q psy13761 227 ENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGM 298 (402)
Q Consensus 227 ~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegy 298 (402)
.+.++.++|++||..|.+.-+... -.+.+.+-|.++|+.=.+|-.+|.-.-..+.+|
T Consensus 12 a~ke~q~~~~~ye~ai~~~qen~~---------------k~e~L~~rl~kLE~qq~~lt~KY~~Ye~sL~eF 68 (267)
T 3tkl_B 12 ADKEIQKMLDEYEQAIKRAQENIK---------------KGEELEKKLDKLERQGKDLEDKYKTYEENLEGF 68 (267)
T ss_dssp ------------------------------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788889999999988554322 224555566666666666666665555444444
No 124
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=39.59 E-value=1.4e+02 Score=24.37 Aligned_cols=48 Identities=10% Similarity=0.286 Sum_probs=30.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy13761 339 QDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSI 386 (402)
Q Consensus 339 EEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkI 386 (402)
..|..+...+..++..+++.+-..+..+..+...+++-.+|.++|..|
T Consensus 26 ~~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Llnv 73 (95)
T 3mov_A 26 ERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDV 73 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555556666666666666666666666666666666777776554
No 125
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=39.55 E-value=58 Score=31.35 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHH---HHH-----h-h--HHHHHHHHHHH
Q psy13761 312 LEEELKKQVNKYDALKTH-AISQLEKANQDLDLRNKTYEMETTKLKAMLKKSE---MQI-----T-S--LQESLARKTEE 379 (402)
Q Consensus 312 y~~rvkkeeQRYqALKaH-AEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeE---mkv-----~-S--LEesLEQKtKE 379 (402)
|.+++..+-.||+-+-.. |+..-+.-++|-.-+-.-++.-+-+.++.+|-.- -+- . + +..--+-+.|=
T Consensus 34 ~~AKLaeqaeRYddMv~~M~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~~i~~yr~ki 113 (268)
T 3efz_A 34 YRAKLADMVGNYKDVIKVLTESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQVIEDIKRDF 113 (268)
T ss_dssp ------------CHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHHHHHHHHHHH
Confidence 556666777777554433 3333455667777777777888888888887431 010 0 0 00001112333
Q ss_pred HHHHHHHHHHHHHcccc
Q psy13761 380 NAELTSICDDLISKLSS 396 (402)
Q Consensus 380 NeELTkICDELIsK~~~ 396 (402)
..||..||+++|.=++.
T Consensus 114 e~EL~~iC~diL~llD~ 130 (268)
T 3efz_A 114 EESILLESEDVIRIIDD 130 (268)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46899999999876554
No 126
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=39.16 E-value=1.3e+02 Score=23.01 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHH
Q psy13761 225 KKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDH 304 (402)
Q Consensus 225 ~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~ 304 (402)
+....+|..-|.+-|.++..+- . .. ..-..++..+.....+..++.+-+..+..+...-.++-. ...-+
T Consensus 8 ~~~l~el~~WL~e~e~~l~~~~-~---~~-~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~---~~~~~--- 76 (118)
T 3uul_A 8 QIALEEVLTWLLSAEDTFQEQD-D---IS-DDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMT---QGTLS--- 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSC-C---CC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCSC---
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-C---CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCC---
Confidence 3344455555555555443311 0 00 113456667777777777777777777766554444321 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 305 LRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLR 344 (402)
Q Consensus 305 LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqv 344 (402)
.........++.....||..|...+.+...+...-+.+.
T Consensus 77 -~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~ 115 (118)
T 3uul_A 77 -DEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMEL 115 (118)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112334667778888899999888887766655544433
No 127
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=38.34 E-value=3.7e+02 Score=28.08 Aligned_cols=9 Identities=22% Similarity=0.383 Sum_probs=4.2
Q ss_pred HHHHHHHHH
Q psy13761 231 YQKMLNDYE 239 (402)
Q Consensus 231 M~~Im~EYE 239 (402)
+..++..|.
T Consensus 440 ~~~~~~~Y~ 448 (592)
T 1f5n_A 440 LQDLKKKYY 448 (592)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444555553
No 128
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=38.26 E-value=2.3e+02 Score=25.62 Aligned_cols=17 Identities=12% Similarity=0.304 Sum_probs=6.6
Q ss_pred HHHHHHHhhHHHHHHHH
Q psy13761 340 DLDLRNKTYEMETTKLK 356 (402)
Q Consensus 340 EIaqvrsk~eaE~~aLq 356 (402)
.....+..+..-+.+++
T Consensus 185 ~~~~a~~~Y~~~v~~~n 201 (290)
T 3i2w_A 185 QVQKCREKYEQAIAEIT 201 (290)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333344443333333
No 129
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=37.92 E-value=1e+02 Score=26.17 Aligned_cols=23 Identities=26% Similarity=0.406 Sum_probs=16.0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHH
Q psy13761 363 EMQITSLQESLARKTEENAELTS 385 (402)
Q Consensus 363 Emkv~SLEesLEQKtKENeELTk 385 (402)
-.+|..|+..|++.+.||..|..
T Consensus 64 ~~~v~eLe~everL~~ENq~L~~ 86 (104)
T 3s9g_A 64 DARVRELELELDRLRAENLQLLT 86 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Confidence 55667777777777777776643
No 130
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=37.57 E-value=29 Score=33.40 Aligned_cols=11 Identities=27% Similarity=0.241 Sum_probs=6.1
Q ss_pred ccccccCccCC
Q psy13761 127 SLYVQFDPFLK 137 (402)
Q Consensus 127 sLYlkFDplLk 137 (402)
-||-.+||-.+
T Consensus 53 fL~~~idp~~~ 63 (315)
T 2ve7_A 53 FLYGFLCPSYE 63 (315)
T ss_dssp HHHTTTSTTCC
T ss_pred HHHHhcCCCCc
Confidence 36666666443
No 131
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=36.96 E-value=1.1e+02 Score=26.71 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13761 301 NEDHLRARHSELEEELKKQ-VNKYDALKTHAISQLEKANQDLDLRNKTY 348 (402)
Q Consensus 301 NEE~LKk~ieey~~rvkke-eQRYqALKaHAEEKLe~ANEEIaqvrsk~ 348 (402)
|++.|+..+.+|-++|.+. ++||+. +.++.+-+-||..++...
T Consensus 59 s~~~L~e~~keLh~~I~~LEeEKYDl-----E~kvkkq~yEI~dL~~rV 102 (133)
T 1j1d_C 59 GFAELQDLARQLHARVDKVDEERYDI-----EAKVTKNITEIADLTQKI 102 (133)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHcchHHHHHHHHH
Confidence 7888999999999998776 788984 556666666676666553
No 132
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=36.65 E-value=2.2e+02 Score=26.55 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHH------HH----HHHH
Q psy13761 312 LEEELKKQVNKYDALKTH----AISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQE------SL----ARKT 377 (402)
Q Consensus 312 y~~rvkkeeQRYqALKaH----AEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEe------sL----EQKt 377 (402)
|.+++..+-.||+-+-.. ++..-+.-++|-.-+-.-++.=+-+.++.+|-... ++.-++ .+ +-+.
T Consensus 10 ~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiiss-ieqk~~~k~~~~~~~~i~~yr~ 88 (234)
T 2br9_A 10 YQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISS-IEQKEENKGGEDKLKMIREYRQ 88 (234)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH-HHHHhhccCchHHHHHHHHHHH
Confidence 667777777777766543 33222355677777777777777777777775422 111100 00 1122
Q ss_pred HHHHHHHHHHHHHHHcccc
Q psy13761 378 EENAELTSICDDLISKLSS 396 (402)
Q Consensus 378 KENeELTkICDELIsK~~~ 396 (402)
|=..||..||+++|.=++.
T Consensus 89 kie~EL~~iC~~il~lld~ 107 (234)
T 2br9_A 89 MVETELKLICCDILDVLDK 107 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHH
Confidence 3347999999999876554
No 133
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=36.60 E-value=1.2e+02 Score=24.08 Aligned_cols=51 Identities=8% Similarity=0.019 Sum_probs=34.5
Q ss_pred HHHHHHHhhHHHHHhh----HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 283 DVHLKYERSKVIIEGM----KANEDHLRARHSELEEELKKQVNKYDALKTHAISQ 333 (402)
Q Consensus 283 DLhrRYEK~KevIegy----KkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEK 333 (402)
+|-.+|..++.+|=++ |-+--..-..+.+|...+....+++..-+..-..+
T Consensus 20 ~ln~~f~~Lr~~vP~~~~~~K~sK~~iL~~A~~YI~~L~~~~~~l~~~~~~L~~~ 74 (88)
T 1nkp_A 20 ELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKR 74 (88)
T ss_dssp HHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677778877766 45555555666779999998888888766543333
No 134
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=36.56 E-value=1.2e+02 Score=29.50 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy13761 332 SQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISK 393 (402)
Q Consensus 332 EKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK 393 (402)
.++..+..+|++++.+..... .+.+.|.-.+..+.++...++.-..-.+-|...++-|-++
T Consensus 226 k~~~~~~~ei~~l~~~i~~~~-~l~~~l~~~~~~~~~l~~~I~~Ai~al~~l~~~W~~m~~~ 286 (346)
T 2nrj_A 226 DNLGKLEPLLAELRQTVDYKV-TLNRVVGVAYSNINEMHKALDDAINALTYMSTQWHDLDSQ 286 (346)
T ss_dssp GGHHHHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888899999988775433 4669999999999999999999888888998888888776
No 135
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=36.38 E-value=77 Score=23.61 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHhHHHhhHHHHHH
Q psy13761 265 KEKEEVQLHLRNSEIAFNDVHLK 287 (402)
Q Consensus 265 kERDQa~aDLnS~EkSFSDLhrR 287 (402)
.-|..+..+|..+|+.|++|=.+
T Consensus 6 rrr~e~ld~l~~LEkqF~~LkEq 28 (49)
T 2xus_A 6 RRRSECVSEMLDLEKQFSELKEK 28 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888999999999988443
No 136
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=35.80 E-value=1.2e+02 Score=23.93 Aligned_cols=44 Identities=9% Similarity=0.152 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13761 304 HLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKT 347 (402)
Q Consensus 304 ~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk 347 (402)
.|+.....+...+...++||..=-......|...-.++++++..
T Consensus 7 ~L~~q~~~Le~~l~e~E~~~~~~l~~~q~~i~~lE~el~~~r~e 50 (86)
T 1x8y_A 7 QLQCQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRAR 50 (86)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555556666666666666654444444444444444444443
No 137
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=35.78 E-value=3.1e+02 Score=27.82 Aligned_cols=77 Identities=10% Similarity=0.095 Sum_probs=50.0
Q ss_pred cccccchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHhHHHHHHHHHHhHHHhh
Q psy13761 209 ERNSTSDEKDKLIEKLKK---ENASYQKMLNDYENTITQCVNQRENDKKQ----FEKYKKELEKEKEEVQLHLRNSEIAF 281 (402)
Q Consensus 209 l~~s~~~~~~~~~e~l~~---~n~eM~~Im~EYEktI~qlIeE~eq~k~~----~~~eiqkllkERDQa~aDLnS~EkSF 281 (402)
++| +...+.-++.|.. ....+..-..+|-+.|+.+....+++... ..+.-.+.+.|+..+..-+...+.+.
T Consensus 30 ~ky--e~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~n~~~~~q~Skkml~~~~~~~~~~~~~~~~i 107 (411)
T 3ghg_C 30 STY--QTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASILTHDSSI 107 (411)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHh--ccchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 444 3456666665554 55556666788888888888888777665 34444557777777766666666666
Q ss_pred HHHHHH
Q psy13761 282 NDVHLK 287 (402)
Q Consensus 282 SDLhrR 287 (402)
..|-.-
T Consensus 108 ~~l~~~ 113 (411)
T 3ghg_C 108 RYLQEI 113 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 138
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=35.21 E-value=1.5e+02 Score=26.20 Aligned_cols=49 Identities=16% Similarity=0.284 Sum_probs=33.6
Q ss_pred hhHHHHHHHHhhHHHHHhhH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 280 AFNDVHLKYERSKVIIEGMK----ANEDHLRARHSELEEELKKQVNKYDALKTH 329 (402)
Q Consensus 280 SFSDLhrRYEK~KevIegyK----kNEE~LKk~ieey~~rvkkeeQRYqALKaH 329 (402)
.+.+||.+-.+++..|-.+- .||+.|-+.+ ...+.|..-=.||+.++.-
T Consensus 92 ll~eL~~~Ck~~qp~i~~Li~e~~ddee~L~elL-~~ND~Ln~vl~kY~~~~~g 144 (158)
T 1naf_A 92 LMKELYQRCERMRPTLFRLASDTEDNDEALAEIL-QANDNLTQVINLYKQLVRG 144 (158)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHCCSCHHHHHHHH-HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHH-HhhHHHHHHHHHHHHHhcC
Confidence 56677777777777655554 4777775444 4777888888889888753
No 139
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=35.19 E-value=3.7e+02 Score=27.62 Aligned_cols=14 Identities=7% Similarity=0.240 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHH
Q psy13761 333 QLEKANQDLDLRNK 346 (402)
Q Consensus 333 KLe~ANEEIaqvrs 346 (402)
+.+.++++|.+..+
T Consensus 59 ~rN~~sk~i~~~~~ 72 (484)
T 3lss_A 59 LINICSKAVGAKKK 72 (484)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 44556667766655
No 140
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=35.17 E-value=1.4e+02 Score=22.26 Aligned_cols=41 Identities=24% Similarity=0.206 Sum_probs=20.5
Q ss_pred HhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy13761 346 KTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSI 386 (402)
Q Consensus 346 sk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkI 386 (402)
..-...+..|+..+...+.....|..++.+...|+..|..+
T Consensus 19 ~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~ 59 (63)
T 2wt7_A 19 NRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFI 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444445555555555555555555555555555444
No 141
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=34.92 E-value=2.5e+02 Score=25.13 Aligned_cols=72 Identities=10% Similarity=0.126 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH
Q psy13761 218 DKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV 293 (402)
Q Consensus 218 ~~~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke 293 (402)
...+..|+.+...+..-+..-+.. +.++.+.-+...+++..+..+-..+..-+..+++-..+|..||.+.|.
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeee----l~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~ 138 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEV----IALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTE 138 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555554444444433332 223333344455667777777777777777777777778888877665
No 142
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=34.73 E-value=1.6e+02 Score=22.99 Aligned_cols=23 Identities=4% Similarity=0.092 Sum_probs=12.6
Q ss_pred HHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 268 EEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 268 DQa~aDLnS~EkSFSDLhrRYEK 290 (402)
+.+...-.++|.+..|+-.+|+.
T Consensus 4 ~~l~~~~~sLE~~l~e~e~~~~~ 26 (84)
T 1gk4_A 4 DALKGTNESLERQMREMEENFAV 26 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455566666666655544
No 143
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=34.69 E-value=85 Score=29.06 Aligned_cols=14 Identities=36% Similarity=0.413 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHcc
Q psy13761 381 AELTSICDDLISKL 394 (402)
Q Consensus 381 eELTkICDELIsK~ 394 (402)
.|.+-|-.||++.+
T Consensus 68 ~e~i~i~~DL~e~L 81 (190)
T 4emc_A 68 AENSEVIKDLYEYL 81 (190)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHc
Confidence 35555666776655
No 144
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=34.56 E-value=2.8e+02 Score=25.59 Aligned_cols=32 Identities=9% Similarity=0.009 Sum_probs=13.6
Q ss_pred HHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhh
Q psy13761 260 KKELEKEKEEVQLHLRNSEIAFNDVHLKYERS 291 (402)
Q Consensus 260 iqkllkERDQa~aDLnS~EkSFSDLhrRYEK~ 291 (402)
+.++.++......+|...-+.|....+.++..
T Consensus 136 ~~k~~k~~~~~~~~l~KaKk~Y~~~c~e~e~a 167 (337)
T 2x3v_A 136 FRKAQKPWAKKMKELEAAKKAYHLACKEERLA 167 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444433
No 145
>3gwo_A Envelope glycoprotein GP160; viral membrane fusion, HIV-1, envelope protein, neutra antibodies, AIDS, apoptosis; HET: JEF; 1.65A {Human immunodeficiency virus type 1 lwisolate} PDB: 3h01_A 3h00_A 1fav_C* 4g6f_P 2pv6_A 3mnw_P 3mnz_P
Probab=34.43 E-value=69 Score=23.80 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Q psy13761 234 MLNDYENTITQCVNQRENDKKQFEKYKKEL 263 (402)
Q Consensus 234 Im~EYEktI~qlIeE~eq~k~~~~~eiqkl 263 (402)
-++.|..+|+.++++.+.+++..+.++..+
T Consensus 5 eI~nyt~~Iy~lle~sq~qqekNe~~Ll~L 34 (54)
T 3gwo_A 5 EINNYTSLIHSLIEESQNQQEKNEQELLEL 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 467899999999999776666555544443
No 146
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.15 E-value=1.4e+02 Score=23.55 Aligned_cols=43 Identities=26% Similarity=0.302 Sum_probs=19.9
Q ss_pred HHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Q psy13761 352 TTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394 (402)
Q Consensus 352 ~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~ 394 (402)
+..|..++--.+--|..|...+-+-.++++.|++-|.-|..++
T Consensus 16 i~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl 58 (78)
T 3efg_A 16 LVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDL 58 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444455555554444444
No 147
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=33.99 E-value=2.6e+02 Score=25.04 Aligned_cols=21 Identities=19% Similarity=0.191 Sum_probs=7.8
Q ss_pred hHHHhhHHHHHHHHhhHHHHH
Q psy13761 276 NSEIAFNDVHLKYERSKVIIE 296 (402)
Q Consensus 276 S~EkSFSDLhrRYEK~KevIe 296 (402)
.+++.+.+.+...+|.|....
T Consensus 120 k~~k~~~~~~~~l~KaKk~Y~ 140 (301)
T 2efk_A 120 RAQQQLENGFKQLENSKRKFE 140 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 148
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=33.20 E-value=2.1e+02 Score=24.89 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy13761 311 ELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLK 356 (402)
Q Consensus 311 ey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLq 356 (402)
-+.++|.....||++|+++-+.-...-.+-|+.++........-.|
T Consensus 47 ~Ll~~LsaIk~ry~~L~~q~~~iaaeQke~~d~ir~tL~~tm~miQ 92 (123)
T 4aj5_K 47 TLLKELSVIKSRYQTLYARFKPVAVEQKESKSRICATVKKTMNMIQ 92 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999883333333556666665444443333
No 149
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=32.53 E-value=2.7e+02 Score=28.41 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHccc
Q psy13761 374 ARKTEENAELTSICDDLISKLS 395 (402)
Q Consensus 374 EQKtKENeELTkICDELIsK~~ 395 (402)
+.-....++|.+.|+.++.++-
T Consensus 582 ~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 4b9q_A 582 AAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHHHHHHHTHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3445556788899999998873
No 150
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=32.47 E-value=44 Score=27.93 Aligned_cols=51 Identities=22% Similarity=0.377 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Q psy13761 347 TYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSSCV 398 (402)
Q Consensus 347 k~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~~~~ 398 (402)
+++.-+..|...+++.|.---+|+++|..-.+=. +|.+.|.+.+.+++..+
T Consensus 31 sFEeal~eLEeIV~~LE~gel~LEesl~lyeeG~-~L~k~C~~~L~~AE~kV 81 (100)
T 1vp7_A 31 DFETALAELESLVSAMENGTLPLEQSLSAYRRGV-ELARVCQDRLAQAEQQV 81 (100)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 4777888899999999988889999998776555 89999999998877643
No 151
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=32.06 E-value=3.5e+02 Score=27.83 Aligned_cols=49 Identities=16% Similarity=0.166 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHH
Q psy13761 333 QLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAE 382 (402)
Q Consensus 333 KLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeE 382 (402)
+.+.++++|.+.++. ..++.+|.+.++...-++..|+.++.+...+..+
T Consensus 55 ~rn~~sk~i~~~k~~-~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~ 103 (485)
T 3qne_A 55 KLNSVQKEIGKRFKA-KEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRS 103 (485)
T ss_dssp HHHHHHHHHHHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677788776543 2355667777776666666666666655555433
No 152
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=31.87 E-value=2.5e+02 Score=24.32 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHhhHHHHH----HhhHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 320 VNKYDALKTHAISQLEKANQDLDLRN---KTYEMETTKLKAMLKKSEMQ----ITSLQESLARKTEENAELTSICDDL 390 (402)
Q Consensus 320 eQRYqALKaHAEEKLe~ANEEIaqvr---sk~eaE~~aLqA~LKKeEmk----v~SLEesLEQKtKENeELTkICDEL 390 (402)
++..+....|-+.+|-.|.+-+.+.. ..-..=+..|+++|+++..+ ++-|+.++...++...+...=-..|
T Consensus 20 q~ECrN~T~lLq~qLTqAQe~l~~~eaQAaTCNqTV~tL~~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erl 97 (121)
T 3mq7_A 20 VMEARNVTHLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERL 97 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 153
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=31.19 E-value=2.1e+02 Score=23.16 Aligned_cols=30 Identities=17% Similarity=0.101 Sum_probs=15.1
Q ss_pred HHHHHHHhHHHHHHHHHHhHHHhhHHHHHH
Q psy13761 258 KYKKELEKEKEEVQLHLRNSEIAFNDVHLK 287 (402)
Q Consensus 258 ~eiqkllkERDQa~aDLnS~EkSFSDLhrR 287 (402)
..++.+..+.|-+......++...-++-.+
T Consensus 9 kKm~~lk~e~e~a~drae~~e~~~k~~e~~ 38 (101)
T 3u1c_A 9 KKMQMLKLDKENALDRAEQAEADKKAAEER 38 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666665555444444443333
No 154
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=30.95 E-value=2.4e+02 Score=23.73 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHhhHH-------HHHHhhHHHHHHHHHHHHHHHH
Q psy13761 320 VNKYDALKTHAISQLEKANQDLDLRN---KTYEMETTKLKAMLKKS-------EMQITSLQESLARKTEENAELT 384 (402)
Q Consensus 320 eQRYqALKaHAEEKLe~ANEEIaqvr---sk~eaE~~aLqA~LKKe-------Emkv~SLEesLEQKtKENeELT 384 (402)
++.....-.|-+.+|-.|.+-+.+.. ..-..-+..|+++|+|+ +.++.-|+.+|...++...+..
T Consensus 13 q~ECrNvT~lLq~qLT~Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 13 QAECRNTTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566677777777776666655 33345577888888888 4556667776666666555543
No 155
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=30.89 E-value=2.8e+02 Score=24.55 Aligned_cols=110 Identities=20% Similarity=0.243 Sum_probs=69.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 256 FEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLE 335 (402)
Q Consensus 256 ~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe 335 (402)
+...+..+..+-..+...|.|+|.+... +-.-|+.+...|..+..+++..+.||+ .|+-++.
T Consensus 40 aE~k~~eLEeeL~~v~~nlKsLE~seek--------------asqrEd~yEeqIk~L~~kLKEAE~RAE----~AERsv~ 101 (155)
T 2efr_A 40 SEGKSAELEEELKTVTNNLKSLEAQAEK--------------YSQKEDKYEEEIKVLSDKLKEAETRAE----FAERSVT 101 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccchhhhhH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 4566667777777777777777776543 334566677777778888888888887 4666666
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Q psy13761 336 KANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394 (402)
Q Consensus 336 ~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~ 394 (402)
+...+|+++... |.....+...+...|++.-.+...+..=.++|=+.+
T Consensus 102 kLEk~id~lEd~-----------L~~~Kek~~~i~~eLd~tl~el~~~~~~~~~~~~~~ 149 (155)
T 2efr_A 102 KLEKSIDDLEDE-----------LYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEV 149 (155)
T ss_dssp HHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 666666666543 333344445555556655555555555555554433
No 156
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=30.86 E-value=1.6e+02 Score=21.64 Aligned_cols=33 Identities=18% Similarity=0.068 Sum_probs=14.0
Q ss_pred HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHH
Q psy13761 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAEL 383 (402)
Q Consensus 351 E~~aLqA~LKKeEmkv~SLEesLEQKtKENeEL 383 (402)
.+..|+..+...+..+..|...+.+...|+..|
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444444444443
No 157
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=30.71 E-value=2.8e+02 Score=25.68 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13761 376 KTEENAELTSICDDLI 391 (402)
Q Consensus 376 KtKENeELTkICDELI 391 (402)
+..|+-+++.=--+++
T Consensus 66 ~~~e~i~i~~DL~e~L 81 (190)
T 4emc_A 66 QQAENSEVIKDLYEYL 81 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHc
Confidence 5566666665333333
No 158
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=30.64 E-value=2.2e+02 Score=23.43 Aligned_cols=29 Identities=7% Similarity=0.015 Sum_probs=23.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHhHHHhhHHH
Q psy13761 256 FEKYKKELEKEKEEVQLHLRNSEIAFNDV 284 (402)
Q Consensus 256 ~~~eiqkllkERDQa~aDLnS~EkSFSDL 284 (402)
..++|..-.....|+.+||.++-..|+=+
T Consensus 53 NpaeIA~~~~~L~qAraDL~~l~r~~av~ 81 (90)
T 4b6x_A 53 NPAEIANTSQQLRHARADLADLQRRFAVL 81 (90)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888899999999888777644
No 159
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=30.46 E-value=1.6e+02 Score=21.61 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Q psy13761 349 EMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394 (402)
Q Consensus 349 eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~ 394 (402)
.....|-+...|| +..+..|+..+.+...||..|..-...|-..+
T Consensus 8 ~NResA~rSR~RK-k~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 8 KNREAARESRRKK-KEYVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444544444 46788899999999999999988888776554
No 160
>1ytz_I Troponin I; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.2 PDB: 2w49_2 2w4u_2 1yv0_I 1vdi_A 1vdj_A
Probab=30.09 E-value=92 Score=28.58 Aligned_cols=44 Identities=18% Similarity=0.314 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy13761 301 NEDHLRARHSELEEELKKQ-VNKYDALKTHAISQLEKANQDLDLRNKTYE 349 (402)
Q Consensus 301 NEE~LKk~ieey~~rvkke-eQRYqALKaHAEEKLe~ANEEIaqvrsk~e 349 (402)
|++.|+....+|-++|.+. ++||+. +.++.+.+-||..++....
T Consensus 56 se~~L~e~ckELh~~I~~LEeEKYDl-----E~kvkkq~yEI~dL~~rVn 100 (182)
T 1ytz_I 56 SMQELQELSKKLHAKIDSVDEERYDT-----EVKLQKTNKELEDLSQKLF 100 (182)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHTTTTG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhH-----HHHHHhhhHHHHHHHHHHH
Confidence 9999999999999998877 788984 6677777788887766543
No 161
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=29.46 E-value=3.2e+02 Score=24.66 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcccc
Q psy13761 374 ARKTEENAELTSICDDLISKLSS 396 (402)
Q Consensus 374 EQKtKENeELTkICDELIsK~~~ 396 (402)
+.-....++|.++|+.++..+..
T Consensus 194 ~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 194 AAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455567888899998876543
No 162
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=29.31 E-value=2.1e+02 Score=22.62 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc
Q psy13761 335 EKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLS 395 (402)
Q Consensus 335 e~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~ 395 (402)
+..-.++..-..+..++-..|+.+ +...++.++...+...+|-.++.+|-..++
T Consensus 34 e~~rkele~~~~~l~~ek~~L~~q-------l~eaEe~~~~L~~~K~eLE~~l~el~~rl~ 87 (89)
T 3bas_A 34 ERIKKELEEQNVTLLEQKNDLFGS-------MKQLEDKVEELLSKNYHLENEVARLKKLVG 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333444444444444444444444 455556666666666677777766655443
No 163
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=28.93 E-value=2.2e+02 Score=22.74 Aligned_cols=55 Identities=20% Similarity=0.211 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH------HHHHHHHhhHHHHHHhh-HHHHHHH
Q psy13761 320 VNKYDALKTHAISQLEKANQDLDLRNKTYEME------TTKLKAMLKKSEMQITS-LQESLAR 375 (402)
Q Consensus 320 eQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE------~~aLqA~LKKeEmkv~S-LEesLEQ 375 (402)
++|-.++ .+++..|+.|++=|.++.-....= =..++++||--...+.+ |...|.+
T Consensus 30 e~Rk~~i-~~ie~~ldEA~ell~qMelE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~lk~ 91 (97)
T 3onj_A 30 SQRNTTL-KHVEQQQDELFDLLDQMDVEVNNSIGDASERATYKAKLREWKKTIQSDIKRPLQS 91 (97)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3454444 367777777777777665443322 34555556655555555 5554443
No 164
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=28.32 E-value=2.4e+02 Score=22.99 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=14.0
Q ss_pred HHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 295 IEGMKANEDHLRARHSELEEELKKQVNKYDALKTH 329 (402)
Q Consensus 295 IegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaH 329 (402)
++-+.++.+.|.+.++.+...+.....++..+...
T Consensus 90 ~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~ 124 (133)
T 1fxk_C 90 MESIKSQKNELESTLQKMGENLRAITDIMMKLSPQ 124 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444444444333333333
No 165
>3mtu_E Head morphogenesis protein, tropomyosin alpha-1 C; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Bacillus phage PHI29}
Probab=28.28 E-value=1.6e+02 Score=23.71 Aligned_cols=45 Identities=9% Similarity=0.160 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhH
Q psy13761 229 ASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNS 277 (402)
Q Consensus 229 ~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~ 277 (402)
++++.--.-||++|-.+-++....+.. ...+..+-||...+|++|
T Consensus 33 ~~~~~~~~~~EKTIDDLEDkL~~eKEK----~k~i~eeLDqTL~ELnsm 77 (77)
T 3mtu_E 33 QQLRVNYGSFVSEYNDLEEKVAHAKEE----NLNMHQMLDQTLLELNNM 77 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHH----HHHHHHHHHHHHHHhhcC
Confidence 445555567888888887776544443 455667778888887764
No 166
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=28.24 E-value=3.1e+02 Score=24.25 Aligned_cols=20 Identities=25% Similarity=0.333 Sum_probs=9.3
Q ss_pred HhhHHHHHHhhHHHHHHHHH
Q psy13761 358 MLKKSEMQITSLQESLARKT 377 (402)
Q Consensus 358 ~LKKeEmkv~SLEesLEQKt 377 (402)
++.+.|..|.-|+..|..-.
T Consensus 99 sv~kLEk~id~lEd~L~~~K 118 (155)
T 2efr_A 99 SVTKLEKSIDDLEDELYAQK 118 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444445554444433
No 167
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=28.08 E-value=2.2e+02 Score=22.51 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 304 HLRARHSELEEELKKQVNKYDALK 327 (402)
Q Consensus 304 ~LKk~ieey~~rvkkeeQRYqALK 327 (402)
.|.+..++...+++..++.|..++
T Consensus 8 ~l~~E~eel~~klk~~~ee~~~~~ 31 (71)
T 1uix_A 8 NLANEKEELNNKLKEAQEQLSRLK 31 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355556666777777777777766
No 168
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=27.96 E-value=2.8e+02 Score=25.51 Aligned_cols=6 Identities=0% Similarity=-0.003 Sum_probs=2.4
Q ss_pred HHHHHH
Q psy13761 216 EKDKLI 221 (402)
Q Consensus 216 ~~~~~~ 221 (402)
++...+
T Consensus 67 ~~~~~l 72 (369)
T 4dk0_A 67 TQINTL 72 (369)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 169
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=27.73 E-value=2e+02 Score=21.69 Aligned_cols=10 Identities=10% Similarity=0.381 Sum_probs=3.8
Q ss_pred hhHHHHHHhh
Q psy13761 359 LKKSEMQITS 368 (402)
Q Consensus 359 LKKeEmkv~S 368 (402)
+...+++++|
T Consensus 65 iq~L~~el~s 74 (77)
T 3trt_A 65 VQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3333333333
No 170
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=27.16 E-value=2.5e+02 Score=22.82 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=3.5
Q ss_pred HHhHHHhhHHHHHHHHhh
Q psy13761 274 LRNSEIAFNDVHLKYERS 291 (402)
Q Consensus 274 LnS~EkSFSDLhrRYEK~ 291 (402)
|++||+-=.|...+|.+.
T Consensus 4 L~~~Ekd~~~~ee~~~~~ 21 (81)
T 3qh9_A 4 LVGMEKEQREQEEKQRKA 21 (81)
T ss_dssp ----------CHHHHHHH
T ss_pred hhHHhhhhhhhHHHHhhH
Confidence 344555444444444433
No 171
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=27.10 E-value=2.8e+02 Score=23.37 Aligned_cols=54 Identities=22% Similarity=0.247 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 337 ANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDL 390 (402)
Q Consensus 337 ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDEL 390 (402)
.|-.++.=++..-=++--|+-.|--.+-.+..+.+++..|.++.+-+.+-|+.|
T Consensus 17 snAQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L 70 (103)
T 4h22_A 17 SNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSIL 70 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 172
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=26.80 E-value=3.5e+02 Score=24.26 Aligned_cols=20 Identities=5% Similarity=0.077 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHcc
Q psy13761 375 RKTEENAELTSICDDLISKL 394 (402)
Q Consensus 375 QKtKENeELTkICDELIsK~ 394 (402)
.-..-.++|.++|+.+..++
T Consensus 192 ~~~~~~~~L~~~~~~i~~r~ 211 (227)
T 1u00_A 192 AIEQAIKNVDKQTQDFAARR 211 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455567778888777654
No 173
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=26.77 E-value=2.4e+02 Score=22.40 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13761 314 EELKKQVNKYDALKTHAISQLEKANQDLDLRNKT 347 (402)
Q Consensus 314 ~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk 347 (402)
..+...++-|...+.-+.+|+..|+.-++-|.+-
T Consensus 62 ~~l~~I~~~~~~~~~l~dEKv~lA~~~~dlvdkh 95 (104)
T 4afl_A 62 ALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKH 95 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788888888889998888877766543
No 174
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=26.36 E-value=3.1e+02 Score=23.57 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=27.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q psy13761 214 SDEKDKLIEKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYK 260 (402)
Q Consensus 214 ~~~~~~~~e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~ei 260 (402)
+|=+.-..+.|++....|.+ -||.+..|+..|-+++-.....+.
T Consensus 34 sDPL~~ELeRLr~~~d~~~K---~HE~kklqLkse~e~E~ae~k~KY 77 (115)
T 3vem_A 34 NDPFLHELEKLRRESENSKK---TFEEKKSILKAELERKMAEVQAEF 77 (115)
T ss_dssp CSHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666777776666555 578888888888555544433333
No 175
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=26.11 E-value=1.9e+02 Score=23.34 Aligned_cols=24 Identities=25% Similarity=0.482 Sum_probs=11.3
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 365 QITSLQESLARKTEENAELTSICD 388 (402)
Q Consensus 365 kv~SLEesLEQKtKENeELTkICD 388 (402)
.|.++++.+.....||..|..+.|
T Consensus 42 ~ie~~~eEi~~LkeEN~~L~el~~ 65 (79)
T 2zxx_A 42 EIEQKDSEIARLRKENKDLAEVAE 65 (79)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444555444444433
No 176
>1o3x_A ADP-ribosylation factor binding protein GGA1; protein transport; 2.10A {Homo sapiens} SCOP: a.7.8.1 PDB: 1nwm_X 1x79_A
Probab=25.93 E-value=1.5e+02 Score=25.71 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13761 312 LEEELKKQVNKYDALK 327 (402)
Q Consensus 312 y~~rvkkeeQRYqALK 327 (402)
..+.|..-=.||+.++
T Consensus 118 ~ND~ln~vl~kY~~~~ 133 (140)
T 1o3x_A 118 ANDNLTQVINLYKQLV 133 (140)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHh
Confidence 4444445555555544
No 177
>1qoy_A Hemolysin E; toxin, membrane pore former, cytolysin, pores; 2.0A {Escherichia coli} SCOP: h.4.4.1 PDB: 2wcd_A
Probab=25.01 E-value=5.1e+02 Score=25.64 Aligned_cols=79 Identities=19% Similarity=0.299 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHH---HHhhHHHHHHHHHHHHHHHHH
Q psy13761 309 HSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEM---QITSLQESLARKTEENAELTS 385 (402)
Q Consensus 309 ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEm---kv~SLEesLEQKtKENeELTk 385 (402)
|+.|.++|+-.+.=|..|. ++|+.||+.++++..+...|..++-+.-+..+. .+.+=-.-+.+...--.+|-.
T Consensus 223 i~s~k~~ikaI~~FF~~L~----~kI~eA~~~~D~v~~~L~~e~~~i~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~l~~ 298 (318)
T 1qoy_A 223 IPELKNKLKSVQNFFTTLS----NTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMIN 298 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHH----HHHHHHHhhHHHHHHHHHHHHHHhccccccccCceeeeeCCHHHHHHhHHHHHHHHH
Confidence 4667788888888888776 578889999999999999999888877666332 222111223334444557777
Q ss_pred HHHHHH
Q psy13761 386 ICDDLI 391 (402)
Q Consensus 386 ICDELI 391 (402)
.|-+--
T Consensus 299 ~C~eY~ 304 (318)
T 1qoy_A 299 TCNEYQ 304 (318)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 787643
No 178
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=24.82 E-value=3.7e+02 Score=23.90 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHH
Q psy13761 324 DALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKS 362 (402)
Q Consensus 324 qALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKe 362 (402)
.+.+..|+......+.|++.+-..-=.|+-.+=|.-|+.
T Consensus 71 ~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~~ 109 (154)
T 2ocy_A 71 NELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKE 109 (154)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777776665544444443333444
No 179
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=24.78 E-value=1.9e+02 Score=20.67 Aligned_cols=13 Identities=8% Similarity=0.233 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q psy13761 333 QLEKANQDLDLRN 345 (402)
Q Consensus 333 KLe~ANEEIaqvr 345 (402)
.|+.+.++|....
T Consensus 41 ~l~~~~~~I~~~k 53 (60)
T 3htk_A 41 KLNTIRDEVIKKK 53 (60)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 180
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=24.52 E-value=3.7e+02 Score=23.77 Aligned_cols=93 Identities=9% Similarity=0.083 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhH-----HHH
Q psy13761 231 YQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANE-----DHL 305 (402)
Q Consensus 231 M~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNE-----E~L 305 (402)
|-.|++.|-..+.++-.+...-... + ...+......|..+.+...-|.+-+.-++.++..+..+. +..
T Consensus 153 ld~ivd~y~~~l~~l~~~id~lE~~----l---~~~~~~~l~~l~~lrr~l~~lrr~l~p~~~vl~~L~~~~~~~~~~~~ 225 (264)
T 3nvo_A 153 CDALTDHASEFIEELHDKIIDLEDN----L---LDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDH 225 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC-----------CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----H---hcCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccCChHH
Confidence 4556666666555544433221111 1 111223345566677777777777777788887776643 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 306 RARHSELEEELKKQVNKYDALKTHA 330 (402)
Q Consensus 306 Kk~ieey~~rvkkeeQRYqALKaHA 330 (402)
+..+.+...++.+.-...+.+..-+
T Consensus 226 ~~~l~Dv~d~~~~~~e~~~~~re~l 250 (264)
T 3nvo_A 226 RRRMQDIADRLGRGLDEIDACIART 250 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555544444444444333
No 181
>1jek_B ENV polyprotein; envelope glycoprotein, retrovirus, HIV, SIV, GP41, viral Pro; 1.50A {Synthetic} SCOP: h.3.2.1
Probab=24.44 E-value=1.1e+02 Score=21.51 Aligned_cols=25 Identities=4% Similarity=0.066 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhHHH
Q psy13761 232 QKMLNDYENTITQCVNQRENDKKQF 256 (402)
Q Consensus 232 ~~Im~EYEktI~qlIeE~eq~k~~~ 256 (402)
-+-|+.|+..|+.++++.+.+.+..
T Consensus 6 ereI~~~t~nIy~LLeeAq~Qq~~a 30 (36)
T 1jek_B 6 EEEIEQHEGNLSLLLREAALQVHIA 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999977666554
No 182
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=24.26 E-value=2.3e+02 Score=21.32 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=27.0
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc
Q psy13761 360 KKSEMQITSLQESLARKTEENAELTSICDDLISKLS 395 (402)
Q Consensus 360 KKeEmkv~SLEesLEQKtKENeELTkICDELIsK~~ 395 (402)
.|-+-++..|+..+++.+.+|.+|..-.+.|=..++
T Consensus 26 ~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 26 ARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455667888888888899999999888777755544
No 183
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=24.25 E-value=2.1e+02 Score=25.56 Aligned_cols=32 Identities=3% Similarity=0.216 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHH
Q psy13761 331 ISQLEKANQDLDLRNKTYEMETTKLKAMLKKS 362 (402)
Q Consensus 331 EEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKe 362 (402)
+.+++....||.+++.+...+-..++..++|+
T Consensus 112 eakI~aL~~Ei~~Lr~qL~~~R~k~~~em~Ke 143 (175)
T 3lay_A 112 TAKINAVAKEMESLGQKLDEQRVKRDVAMAQA 143 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36777788888888888887777777777664
No 184
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=24.20 E-value=3.5e+02 Score=25.37 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=48.6
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHH
Q psy13761 299 KANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTE 378 (402)
Q Consensus 299 KkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtK 378 (402)
..|++.+|..++ .||.++| +++..|+..|.+.+++..|+..+|+|-.+
T Consensus 159 ~asde~Ik~yLa----------~R~~~lK----------------------~kl~~l~~~L~~~~~e~~s~~~~~~~~~~ 206 (228)
T 3q0x_A 159 PGNDSVVKQFLA----------FRLSEVK----------------------GTCHDLSDDLSRTRDDRDSMVAQLAQCRQ 206 (228)
T ss_dssp ECCHHHHHHHHH----------HHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHH----------HHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888886665 5666666 24455677778888888888888888888
Q ss_pred HHHHHHHHHHHHHHcccc
Q psy13761 379 ENAELTSICDDLISKLSS 396 (402)
Q Consensus 379 ENeELTkICDELIsK~~~ 396 (402)
..+||-.-.|-+.-.+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~ 224 (228)
T 3q0x_A 207 QLAQLREQYDKHLLEVQA 224 (228)
T ss_dssp HHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHhhhheeeec
Confidence 888888888877665554
No 185
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=24.17 E-value=3.1e+02 Score=22.84 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhh---------------hhhhHHHHHHHHHHHhHHHHHHHHHHhH
Q psy13761 215 DEKDKLIEKLKKENASYQKMLNDYENTITQCV--NQR---------------ENDKKQFEKYKKELEKEKEEVQLHLRNS 277 (402)
Q Consensus 215 ~~~~~~~e~l~~~n~eM~~Im~EYEktI~qlI--eE~---------------eq~k~~~~~eiqkllkERDQa~aDLnS~ 277 (402)
+.++..++.|.+++..|+.-++.+|.-+-+.. .+- ....+....++.++..|-+.++..+..|
T Consensus 15 ~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~~v~~l 94 (100)
T 1go4_E 15 DTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLRAM 94 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999998776621 111 0112234567777888888888777776
Q ss_pred HH
Q psy13761 278 EI 279 (402)
Q Consensus 278 Ek 279 (402)
|.
T Consensus 95 Ee 96 (100)
T 1go4_E 95 ER 96 (100)
T ss_dssp C-
T ss_pred hc
Confidence 64
No 186
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=24.12 E-value=5.7e+02 Score=25.88 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=22.1
Q ss_pred HHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHh
Q psy13761 263 LEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKA 300 (402)
Q Consensus 263 llkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKk 300 (402)
|++-..-+..+|+.||....++-...--.++.|..++.
T Consensus 29 L~kye~~V~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~ 66 (411)
T 3ghg_C 29 LSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQL 66 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccchhhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 44444455566666777776666665555555555443
No 187
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=24.00 E-value=4.4e+02 Score=24.54 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHH-HHHhh-H
Q psy13761 222 EKLKKENASYQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKV-IIEGM-K 299 (402)
Q Consensus 222 e~l~~~n~eM~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~Ke-vIegy-K 299 (402)
.++++....|......|-.+++.+=+- ......+ .+|-.++.+ .+|.|+.-+...+ +...| .
T Consensus 39 ~kY~~al~~~~~a~~~f~dal~kia~~-A~~s~gs-~elG~~L~~--------------i~~~~r~ie~~l~~~~~~~~~ 102 (253)
T 2ykt_A 39 KNYEKALAGVTYAAKGYFDALVKMGEL-ASESQGS-KELGDVLFQ--------------MAEVHRQIQNQLEEMLKSFHN 102 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTSSSC-HHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcch-HHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHH
Confidence 444555555566666666666554332 2221122 333333322 3444444433222 11111 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy13761 300 ANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYE 349 (402)
Q Consensus 300 kNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~e 349 (402)
..=--|.+.+++....+....++|..=-.++...|++|..++-.++++.+
T Consensus 103 ~li~pL~~kie~d~K~v~~~~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k 152 (253)
T 2ykt_A 103 ELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQ 152 (253)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhhcc
Confidence 22233666777777777777778877666788889999999988888764
No 188
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=23.94 E-value=2.6e+02 Score=21.85 Aligned_cols=55 Identities=11% Similarity=-0.006 Sum_probs=31.9
Q ss_pred HHHHHHHhhHHHHHhhHhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 283 DVHLKYERSKVIIEGMKANE----DHLRARHSELEEELKKQVNKYDALKTHAISQLEKA 337 (402)
Q Consensus 283 DLhrRYEK~KevIegyKkNE----E~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~A 337 (402)
+|=..|..++.+|=++..|+ -.+-+.+.+|...++..+++++.-+.....+.+..
T Consensus 15 ~lk~~f~~Lr~~vP~~~~~~k~sk~~iL~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L 73 (80)
T 1nlw_A 15 HLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHL 73 (80)
T ss_dssp HHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777776553332 23444455788888888887776554444333333
No 189
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=23.89 E-value=3e+02 Score=22.60 Aligned_cols=55 Identities=15% Similarity=0.084 Sum_probs=34.7
Q ss_pred HHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 277 SEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQ 339 (402)
Q Consensus 277 ~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANE 339 (402)
+..-...|..||.++++.+.. -+..+++.. .+.+..+.+..+..+..++...|..
T Consensus 17 I~~r~~~l~~r~~~L~~~a~~-------R~~~Le~s~-~l~~F~~d~~el~~Wi~ek~~~~~~ 71 (149)
T 3f31_A 17 IQERRQQVLDRYHRFKELSTL-------RRQKLEDSY-RFQFFQRDAEELEKWIQEKLQIASD 71 (149)
T ss_dssp HHHHHHHHHHHTCSCHHHHHH-------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444555666777777776654 344445444 3666677777777777777776654
No 190
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=23.61 E-value=2.9e+02 Score=22.29 Aligned_cols=28 Identities=29% Similarity=0.248 Sum_probs=13.0
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHH
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDV 284 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDL 284 (402)
.+++..+..+-..+...|..+|+-...|
T Consensus 10 ~~eL~~l~~eE~~L~~eL~~lEke~~~l 37 (96)
T 3q8t_A 10 QRELKELALEEERLIQELEDVEKNRKVV 37 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3444444444444444444444444443
No 191
>2z2t_D Fusion inhibitor peptide SC34EK; coiled-coil, viral protein/inhibitor complex; 2.10A {Synthetic}
Probab=23.54 E-value=1.6e+02 Score=19.92 Aligned_cols=27 Identities=11% Similarity=0.480 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHH
Q psy13761 231 YQKMLNDYENTITQCVNQRENDKKQFE 257 (402)
Q Consensus 231 M~~Im~EYEktI~qlIeE~eq~k~~~~ 257 (402)
..+=++.|...|+.++++.+.+.+..+
T Consensus 5 Wekei~n~t~~Iy~lle~sq~qqekNe 31 (36)
T 2z2t_D 5 WDRKIEEYTKKIEELIKKSQEQQEKNE 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 345568999999999999775554433
No 192
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=23.35 E-value=6.5e+02 Score=26.24 Aligned_cols=23 Identities=22% Similarity=0.068 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 323 YDALKTHAISQLEKANQDLDLRN 345 (402)
Q Consensus 323 YqALKaHAEEKLe~ANEEIaqvr 345 (402)
|..|.+.+..-..+.|+-++.+.
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~ 493 (695)
T 2j69_A 471 FKELSRSASQYGASYNQITDQIT 493 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444
No 193
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=23.32 E-value=1.4e+02 Score=24.62 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=11.2
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHhHH
Q psy13761 241 TITQCVNQRENDKKQFEKYKKELEKEK 267 (402)
Q Consensus 241 tI~qlIeE~eq~k~~~~~eiqkllkER 267 (402)
+|++|-...-+-|+.++++|.+|..|.
T Consensus 58 tvyeLE~~h~kmKq~YEeEI~rLr~eL 84 (92)
T 3vp9_A 58 TVYERELTHRKMKDAYEEEIKHLKLGL 84 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334444444444444433
No 194
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=23.19 E-value=58 Score=36.08 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy13761 348 YEMETTKLKAMLKKSEMQITSLQESLARKTEENA-ELTSICDDLIS 392 (402)
Q Consensus 348 ~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENe-ELTkICDELIs 392 (402)
.-..+..++|.+||.+. ++..|..-..... +|+.+|++|++
T Consensus 906 ~g~dl~~vqallkKhea----~e~dl~a~e~ri~~~l~~~a~~L~~ 947 (995)
T 2ycu_A 906 TGDSITAVQAKLKNLEA----FDGECQSLEGQSNSDLLSILAQLTE 947 (995)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHTTTCSCSSHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567888888888866 3444444444444 67777777764
No 195
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=23.10 E-value=6.6e+02 Score=26.25 Aligned_cols=11 Identities=18% Similarity=0.359 Sum_probs=5.5
Q ss_pred HHHHHHHHHHH
Q psy13761 234 MLNDYENTITQ 244 (402)
Q Consensus 234 Im~EYEktI~q 244 (402)
.-++||+.++.
T Consensus 28 aka~Ye~~~ae 38 (497)
T 3iox_A 28 AKAAYEAAVAA 38 (497)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34555554444
No 196
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=22.87 E-value=2.9e+02 Score=22.05 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=25.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 212 STSDEKDKLIEKLKKENASYQKMLNDYENTI 242 (402)
Q Consensus 212 s~~~~~~~~~e~l~~~n~eM~~Im~EYEktI 242 (402)
+|.+++..++...+.++..+..|++.+..-+
T Consensus 3 kQNKeL~~kl~~Kq~EI~rLnvlvgslR~KL 33 (74)
T 2q6q_A 3 QQNKELNFKLREKQNEIFELKKIAETLRSKL 33 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888889999999999999886543
No 197
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=22.77 E-value=2.9e+02 Score=21.87 Aligned_cols=22 Identities=23% Similarity=0.213 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHHhHHHHHHHH
Q psy13761 252 DKKQFEKYKKELEKEKEEVQLH 273 (402)
Q Consensus 252 ~k~~~~~eiqkllkERDQa~aD 273 (402)
.+..++....++..++..+...
T Consensus 36 ~rkele~~~~~l~~ek~~L~~q 57 (89)
T 3bas_A 36 IKKELEEQNVTLLEQKNDLFGS 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455556666666666555
No 198
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=22.75 E-value=1.9e+02 Score=23.77 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=14.2
Q ss_pred HHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 259 YKKELEKEKEEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 259 eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK 290 (402)
+...+..+.+++..++..+-+.-..+-.+|+.
T Consensus 56 e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 56 EKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444444445544
No 199
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=22.42 E-value=2.2e+02 Score=21.28 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 349 EMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLIS 392 (402)
Q Consensus 349 eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICDELIs 392 (402)
...++|-+-..| -..+...|+..++..+++|.+|..-++.|=.
T Consensus 9 rNr~AA~R~R~K-Kk~~~~~le~~~~~L~~~N~~L~~~i~~L~~ 51 (63)
T 1ci6_A 9 QNKTAATRYRQK-KRAEQEALTGECKELEKKNEALKERADSLAK 51 (63)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666643 3556778888888888888888887777644
No 200
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=22.41 E-value=4.1e+02 Score=23.59 Aligned_cols=46 Identities=20% Similarity=0.261 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHh---hHHHHHHHHHHhhHHHHHHhhHHHHHHHHH
Q psy13761 332 SQLEKANQDLDLRNKT---YEMETTKLKAMLKKSEMQITSLQESLARKT 377 (402)
Q Consensus 332 EKLe~ANEEIaqvrsk---~eaE~~aLqA~LKKeEmkv~SLEesLEQKt 377 (402)
.-.+.||+-.+..+.. .+.....|+..++-.+..+.+++.+|....
T Consensus 94 sLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK 142 (154)
T 2ocy_A 94 SLFDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLK 142 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566555544433 344456777888888888888888776543
No 201
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=22.33 E-value=4e+02 Score=23.43 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=13.9
Q ss_pred HHHhHHHHHHHHHHhHHHhhHHHHHHHHh
Q psy13761 262 ELEKEKEEVQLHLRNSEIAFNDVHLKYER 290 (402)
Q Consensus 262 kllkERDQa~aDLnS~EkSFSDLhrRYEK 290 (402)
.+-..+.++...|+.+-..+..+...+++
T Consensus 84 ~~a~~h~~~a~~l~~~~~~l~~~~~~~~~ 112 (276)
T 2v0o_A 84 KLANCHLDLVRKLQELIKEVQKYGEEQVK 112 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555444555555444443
No 202
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=22.27 E-value=5.4e+02 Score=25.80 Aligned_cols=170 Identities=16% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHhHHHHHHHHHHhHHHhhHHHH-------HHHHhhHHHHHhhHhhHH
Q psy13761 231 YQKMLNDYENTITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVH-------LKYERSKVIIEGMKANED 303 (402)
Q Consensus 231 M~~Im~EYEktI~qlIeE~eq~k~~~~~eiqkllkERDQa~aDLnS~EkSFSDLh-------rRYEK~KevIegyKkNEE 303 (402)
+-.++.+.---+..+.+|......-+.-.+..+..+-.++...+..+++....+. .=+.+++..+.....--+
T Consensus 254 l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~~~d~f~~~m~~Fl~~A~~~~~ 333 (457)
T 3obv_E 254 LAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYN 333 (457)
T ss_dssp HHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHH
Q psy13761 304 HLRARHSELEEELKKQVNKY---------DALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLA 374 (402)
Q Consensus 304 ~LKk~ieey~~rvkkeeQRY---------qALKaHAEEKLe~ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLE 374 (402)
.|..........+...-.-| +..=..-.+-+..-..-..+.....++|-..-+|.+.+++-+..-+++...
T Consensus 334 ~L~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~r~e~eek~~r~~~a~e~~~~~~~e~~~~ 413 (457)
T 3obv_E 334 KLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQK 413 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HH-----HHHHHHHHHHHHHHHHcccccccCC
Q psy13761 375 RK-----TEENAELTSICDDLISKLSSCVKLK 401 (402)
Q Consensus 375 QK-----tKENeELTkICDELIsK~~~~~~~~ 401 (402)
.+ ..+.+| +..-|+|++++.+|.-++
T Consensus 414 ~~~~~~~~~~~~~-~gv~D~Ll~~l~sg~~f~ 444 (457)
T 3obv_E 414 REQLIDMNAEGDE-TGVMDSLLEALQSGAAFR 444 (457)
T ss_dssp HTTSCCTTSCSCC-CCHHHHHHHHHHHSTTC-
T ss_pred HhhhhcccCCccc-cccHHHHHHHHhcchhhh
No 203
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=22.21 E-value=1.3e+02 Score=25.03 Aligned_cols=47 Identities=11% Similarity=0.260 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 337 ANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICD 388 (402)
Q Consensus 337 ANEEIaqvrsk~eaE~~aLqA~LKKeEmkv~SLEesLEQKtKENeELTkICD 388 (402)
++.+|+.+++..+ .+..|++.+...+.++..+...|.+. ..+...|.
T Consensus 4 l~~~~~~l~~~~~-~~~~l~~~~~~l~~~l~~~~~~l~~~----~~~~~~Cp 50 (182)
T 3kqg_A 4 LNAQIPELKSDLE-KASALNTKIRALQGSLENMSKLLKRQ----NDILQVVS 50 (182)
T ss_dssp ---------CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHT
T ss_pred hhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhccCC
Confidence 4556666666543 55666777666666666665554432 23455664
No 204
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=22.10 E-value=4.1e+02 Score=23.39 Aligned_cols=37 Identities=8% Similarity=0.122 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy13761 314 EELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEM 350 (402)
Q Consensus 314 ~rvkkeeQRYqALKaHAEEKLe~ANEEIaqvrsk~ea 350 (402)
-..+.+.+.|..=|..|+.+|..|.+..++++++...
T Consensus 41 ~T~E~E~q~~~~kk~~Aekql~~Ake~~eKlkKKrsS 77 (136)
T 3ter_A 41 RTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGS 77 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHhHHHHHHHHHccccHHHHHHHHHHHHHHHHHhhhc
Confidence 5677788899999999999999999999999999443
No 205
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=21.76 E-value=3.3e+02 Score=22.20 Aligned_cols=13 Identities=8% Similarity=0.164 Sum_probs=7.6
Q ss_pred HHHhhHHHHHhhH
Q psy13761 287 KYERSKVIIEGMK 299 (402)
Q Consensus 287 RYEK~KevIegyK 299 (402)
.|++++++++.++
T Consensus 33 e~~~~~e~l~~l~ 45 (133)
T 1fxk_C 33 ELEILEKTLSDIQ 45 (133)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc
Confidence 4555666666655
No 206
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=21.73 E-value=5e+02 Score=24.35 Aligned_cols=11 Identities=0% Similarity=0.012 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q psy13761 382 ELTSICDDLIS 392 (402)
Q Consensus 382 ELTkICDELIs 392 (402)
++++-.+.++.
T Consensus 231 ~~~~~l~~~~e 241 (273)
T 3s84_A 231 NFNKALVQQME 241 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444443333
No 207
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=21.63 E-value=2.1e+02 Score=28.05 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHhhHHHHHHhhHHHHH
Q psy13761 348 YEMETTKLKAMLKKSEMQITSLQESL 373 (402)
Q Consensus 348 ~eaE~~aLqA~LKKeEmkv~SLEesL 373 (402)
+.+++..|+..|...+.+|+.|+..|
T Consensus 24 ~~~~i~~L~~~l~~~~~~i~~l~~~i 49 (323)
T 1lwu_C 24 HDAQIQELSEMWRVNQQFVTRLQQQL 49 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444333
No 208
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=21.47 E-value=4.1e+02 Score=23.21 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 264 EKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDL 343 (402)
Q Consensus 264 lkERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqALKaHAEEKLe~ANEEIaq 343 (402)
+++|+.+..=..-++.+..-|-.-..++..=++.=++-...|..|...|.+.+.+-+.++++.| .++++++.--.+
T Consensus 64 lkDk~~~e~l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK----~Kl~rv~~vkke 139 (152)
T 4fla_A 64 ITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYK----QKLARVTQVRKE 139 (152)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_pred HHHhhHH
Q psy13761 344 RNKTYEM 350 (402)
Q Consensus 344 vrsk~ea 350 (402)
+++-.+.
T Consensus 140 L~~hi~s 146 (152)
T 4fla_A 140 LKSHIQS 146 (152)
T ss_dssp HHHHHHT
T ss_pred HHHHhhc
No 209
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=21.43 E-value=3.3e+02 Score=22.17 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=9.4
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHH
Q psy13761 362 SEMQITSLQESLARKTEENAELT 384 (402)
Q Consensus 362 eEmkv~SLEesLEQKtKENeELT 384 (402)
.+-+|.-|++.+++-.+-+.+|.
T Consensus 56 h~~ei~~le~~i~rhk~~i~~l~ 78 (84)
T 1gmj_A 56 HAKEIERLQKEIERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333334444444444444443
No 210
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=21.38 E-value=3.2e+02 Score=24.89 Aligned_cols=11 Identities=18% Similarity=0.456 Sum_probs=4.1
Q ss_pred HHHHHHhhHHH
Q psy13761 353 TKLKAMLKKSE 363 (402)
Q Consensus 353 ~aLqA~LKKeE 363 (402)
..+++.++..+
T Consensus 131 ~~~~a~l~~a~ 141 (341)
T 3fpp_A 131 GTIDAQIKRNQ 141 (341)
T ss_dssp HHHHHHHHHTH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 211
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=21.23 E-value=3.4e+02 Score=22.14 Aligned_cols=29 Identities=24% Similarity=0.410 Sum_probs=21.8
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 362 SEMQITSLQESLARKTEENAELTSICDDL 390 (402)
Q Consensus 362 eEmkv~SLEesLEQKtKENeELTkICDEL 390 (402)
.-..|.+|++.+....++|++|-.+...+
T Consensus 51 Lh~~ie~l~eEi~~lk~en~eL~elae~~ 79 (83)
T 1uii_A 51 LHKEIEQKDNEIARLKKENKELAEVAEHV 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33457778888888889999988776653
No 212
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=21.10 E-value=2.9e+02 Score=21.31 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=22.8
Q ss_pred HHHHHHHHhHHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHh
Q psy13761 257 EKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEG 297 (402)
Q Consensus 257 ~~eiqkllkERDQa~aDLnS~EkSFSDLhrRYEK~KevIeg 297 (402)
...++.+..+.|.+...+..++.-.-+.-.+..+.-+-|..
T Consensus 5 kkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~ 45 (81)
T 1ic2_A 5 KKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVA 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34455666666666666666666555555555444443333
No 213
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=21.07 E-value=2.8e+02 Score=25.99 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=12.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Q psy13761 366 ITSLQESLARKTEENAELTSICD 388 (402)
Q Consensus 366 v~SLEesLEQKtKENeELTkICD 388 (402)
|.+|++.+....+||++|-.|.+
T Consensus 124 ie~l~eEi~~LkeEn~eLkeLae 146 (209)
T 2wvr_A 124 IEQKDNEIARLKKENKELAEVAE 146 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555444
No 214
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=20.71 E-value=4.9e+02 Score=23.85 Aligned_cols=18 Identities=11% Similarity=0.034 Sum_probs=7.9
Q ss_pred HHHHHHHhHHHhhHHHHH
Q psy13761 269 EVQLHLRNSEIAFNDVHL 286 (402)
Q Consensus 269 Qa~aDLnS~EkSFSDLhr 286 (402)
.+...+...+..+..+-.
T Consensus 67 ~~~~~l~~~~a~l~~~~a 84 (369)
T 4dk0_A 67 TQINTLNTRKAALASYQA 84 (369)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444333
No 215
>3vie_B Sifuvirtide; 6-helix bundle, membrane fusion inhibition, HIV, viral prote antiviral protein complex; 1.80A {Human immunodeficiency virus 1}
Probab=20.59 E-value=1.9e+02 Score=19.58 Aligned_cols=29 Identities=10% Similarity=0.398 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q psy13761 231 YQKMLNDYENTITQCVNQRENDKKQFEKY 259 (402)
Q Consensus 231 M~~Im~EYEktI~qlIeE~eq~k~~~~~e 259 (402)
-.+-++.|..+|+.++++.+.+.+..+.+
T Consensus 6 Wekei~n~t~~Iy~lle~sq~qqekNek~ 34 (37)
T 3vie_B 6 WEREIENYTRQIYRILEESQEQQDRNERD 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34567889999999999877665554433
No 216
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=20.23 E-value=4.4e+02 Score=23.06 Aligned_cols=21 Identities=10% Similarity=0.170 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHccc
Q psy13761 375 RKTEENAELTSICDDLISKLS 395 (402)
Q Consensus 375 QKtKENeELTkICDELIsK~~ 395 (402)
|-.++.+++..-|++-...+.
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~ 153 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQ 153 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHhHHHHHHHHHHHHHhc
Confidence 445555566666655554443
No 217
>1lwu_B Fibrinogen beta chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_B*
Probab=20.22 E-value=1.5e+02 Score=28.86 Aligned_cols=47 Identities=15% Similarity=0.316 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHhhHHHHHHhhHHHHHHHH
Q psy13761 330 AISQLEKANQDLDLRN-KTYEMETTKLKAMLKKSEMQITSLQESLARK 376 (402)
Q Consensus 330 AEEKLe~ANEEIaqvr-sk~eaE~~aLqA~LKKeEmkv~SLEesLEQK 376 (402)
|.+.|+.....|..+. ..+...+..|++.+....-+|+.|+..|.+.
T Consensus 7 ~~~~le~~~~~ik~~~~~~~~~~I~~Lq~~le~L~~KI~~LE~~v~~q 54 (323)
T 1lwu_B 7 AQKEIENRYKEVKIRIESTVAGSLRSMKSVLEHLRAKMQRMEEAIKTQ 54 (323)
T ss_dssp CHHHHHHHTHHHHHHHHTTTHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555443 4555566667777777666666666555443
No 218
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=20.18 E-value=2.3e+02 Score=23.39 Aligned_cols=17 Identities=35% Similarity=0.348 Sum_probs=8.3
Q ss_pred HHHHhhHHHHHHHHHHh
Q psy13761 343 LRNKTYEMETTKLKAML 359 (402)
Q Consensus 343 qvrsk~eaE~~aLqA~L 359 (402)
.++..++.|+..|+..|
T Consensus 68 kmKq~YEeEI~rLr~eL 84 (92)
T 3vp9_A 68 KMKDAYEEEIKHLKLGL 84 (92)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444555555555443
No 219
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=20.17 E-value=4.1e+02 Score=22.67 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhHHHhhHHHHHHHHhhHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13761 266 EKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDA 325 (402)
Q Consensus 266 ERDQa~aDLnS~EkSFSDLhrRYEK~KevIegyKkNEE~LKk~ieey~~rvkkeeQRYqA 325 (402)
+-|-+.+.|.+.|.++.+--.-..++|+.|...++.- ..|.-+.+-++-+...|.+
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~l----E~I~vLkaQv~IY~~DF~a 80 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVM----ETVPVLKAQADIYKADFQA 80 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcc
Confidence 4456677777777777777777777776555533311 1233334444444444544
No 220
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=20.05 E-value=1.7e+02 Score=30.27 Aligned_cols=37 Identities=8% Similarity=0.229 Sum_probs=2.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHhhHHH
Q psy13761 327 KTHAISQLEKANQDLDLRNKT---YEMETTKLKAMLKKSE 363 (402)
Q Consensus 327 KaHAEEKLe~ANEEIaqvrsk---~eaE~~aLqA~LKKeE 363 (402)
|.+.+.++..|..++.++... -.+|+..|+..+...+
T Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~a~ 446 (575)
T 2i1j_A 407 RQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDAR 446 (575)
T ss_dssp -----------------------------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444322 2234444444444433
Done!