Your job contains 1 sequence.
>psy13761
MLRKYQTNPPTKQLKKKSLPKEPFNPHNDSLGEFELAESQLISEEKRLSERLKEEKELAE
DTKEVVNLSGHSDRDLLENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISE
SELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLS
IKENESLNGNCATSTPSGTAHTANLISPERNSTSDEKDKLIEKLKKENASYQKMLNDYEN
TITQCVNQRENDKKQFEKYKKELEKEKEEVQLHLRNSEIAFNDVHLKYERSKVIIEGMKA
NEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKTYEMETTKLKAMLK
KSEMQITSLQESLARKTEENAELTSICDDLISKLSSCVKLKF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13761
(402 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026620 - symbol:tacc "transforming acidic coiled-... 280 1.9e-27 2
UNIPROTKB|F1NCL7 - symbol:TACC3 "Uncharacterized protein"... 261 3.4e-27 2
UNIPROTKB|F1S8S7 - symbol:TACC3 "Uncharacterized protein"... 251 4.6e-24 2
UNIPROTKB|Q9PTG8 - symbol:tacc3 "Transforming acidic coil... 250 3.5e-23 2
UNIPROTKB|A6QL93 - symbol:TACC3 "TACC3 protein" species:9... 240 4.4e-23 3
RGD|1302948 - symbol:Tacc3 "transforming, acidic coiled-c... 226 4.5e-22 2
MGI|MGI:1341163 - symbol:Tacc3 "transforming, acidic coil... 220 6.8e-22 2
UNIPROTKB|E2RGF0 - symbol:TACC3 "Uncharacterized protein"... 228 3.8e-21 2
UNIPROTKB|Q9Y6A5 - symbol:TACC3 "Transforming acidic coil... 234 7.8e-21 2
UNIPROTKB|G8JLK4 - symbol:TACC1 "Transforming acidic coil... 235 7.4e-19 2
UNIPROTKB|O75410 - symbol:TACC1 "Transforming acidic coil... 235 7.8e-19 2
RGD|1303004 - symbol:Tacc2 "transforming, acidic coiled-c... 222 1.4e-18 3
RGD|1303120 - symbol:Tacc1 "transforming, acidic coiled-c... 234 1.5e-18 2
MGI|MGI:2443510 - symbol:Tacc1 "transforming, acidic coil... 234 6.3e-18 2
UNIPROTKB|F1MSQ8 - symbol:F1MSQ8 "Uncharacterized protein... 235 7.8e-18 2
UNIPROTKB|H0YBT8 - symbol:TACC1 "Transforming acidic coil... 234 1.7e-17 1
UNIPROTKB|F1MDB9 - symbol:TACC2 "Uncharacterized protein"... 222 1.7e-17 3
UNIPROTKB|E7EVI4 - symbol:TACC1 "Transforming acidic coil... 235 2.5e-17 1
UNIPROTKB|E7ET87 - symbol:TACC1 "Transforming acidic coil... 235 2.7e-17 1
UNIPROTKB|H0YAY0 - symbol:TACC1 "Transforming acidic coil... 234 3.0e-17 1
UNIPROTKB|E1C586 - symbol:Gga.42270 "Uncharacterized prot... 235 4.5e-17 1
UNIPROTKB|E7EMZ9 - symbol:TACC2 "Transforming acidic coil... 220 4.9e-17 3
UNIPROTKB|E9PBC6 - symbol:TACC2 "Transforming acidic coil... 220 5.2e-17 3
ZFIN|ZDB-GENE-050522-327 - symbol:tacc3 "transforming, ac... 208 5.2e-17 2
UNIPROTKB|O95359 - symbol:TACC2 "Transforming acidic coil... 220 5.6e-17 3
MGI|MGI:1928899 - symbol:Tacc2 "transforming, acidic coil... 211 1.7e-16 3
UNIPROTKB|I3LM30 - symbol:TACC2 "Uncharacterized protein"... 216 4.3e-16 2
DICTYBASE|DDB_G0275391 - symbol:tacc "transforming acidic... 117 0.00013 2
ZFIN|ZDB-GENE-030131-2964 - symbol:tpm4b "tropomyosin 4b"... 114 0.00034 1
MGI|MGI:2449202 - symbol:Tpm4 "tropomyosin 4" species:100... 111 0.00075 1
RGD|3899 - symbol:Tpm4 "tropomyosin 4" species:10116 "Rat... 111 0.00075 1
>FB|FBgn0026620 [details] [associations]
symbol:tacc "transforming acidic coiled-coil protein"
species:7227 "Drosophila melanogaster" [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=NAS;TAS]
[GO:0007067 "mitosis" evidence=NAS;IMP] [GO:0035046 "pronuclear
migration" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA;TAS] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0000242 "pericentriolar material" evidence=NAS] [GO:0007344
"pronuclear fusion" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008104 "protein localization" evidence=IMP;TAS]
[GO:0007143 "female meiosis" evidence=TAS] [GO:0000235 "astral
microtubule" evidence=TAS] [GO:0007052 "mitotic spindle
organization" evidence=TAS] [GO:0008017 "microtubule binding"
evidence=TAS] [GO:0005876 "spindle microtubule" evidence=TAS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007279 "pole cell
formation" evidence=IMP] EMBL:AE014297 GO:GO:0035046 GO:GO:0005875
GO:GO:0008104 GO:GO:0007067 GO:GO:0007052 GO:GO:0007143
GO:GO:0007279 GO:GO:0008017 GO:GO:0000242 GO:GO:0000922
GO:GO:0000235 InterPro:IPR007707 Pfam:PF05010 GO:GO:0007026
GO:GO:0007344 PANTHER:PTHR13924 GeneTree:ENSGT00530000063855
KO:K14283 FlyBase:FBgn0026620 UniGene:Dm.1062 GeneID:40589
KEGG:dme:Dmel_CG9765 CTD:40589 GenomeRNAi:40589 NextBio:819533
EMBL:AY058499 RefSeq:NP_477433.2 STRING:Q95TU9
EnsemblMetazoa:FBtr0089953 UCSC:CG9765-RC InParanoid:Q95TU9
Uniprot:Q95TU9
Length = 1308
Score = 280 (103.6 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 57/164 (34%), Positives = 92/164 (56%)
Query: 228 NASYQKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLK 287
NA ++ YE I + ++++ HL + E F+D+H+K
Sbjct: 1136 NAKLNGVIEAYEKAIAELISEKEQQAQLHERQLQEVQADRDANYHHLTSLETTFSDLHVK 1195
Query: 288 YERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDLDLRNKT 347
YE+SK + +K+NE+ L A ++ + L+ Q +YD +K HA+ QLE AN+ LD ++
Sbjct: 1196 YEKSKEMTSQLKSNEESLLAERKQMMDNLRLQEQRYDKMKNHAMQQLEIANKKLDTYSRE 1255
Query: 348 YEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLI 391
+ ET KLKA+LKK E+ S+ E L +K+ ENA+L IC++LI
Sbjct: 1256 HADETKKLKALLKKEEISRVSMTEQLQQKSRENADLLKICEELI 1299
Score = 70 (29.7 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 26/102 (25%), Positives = 52/102 (50%)
Query: 102 ELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLN 161
E+ +F G + + + + SL ++FDP L +PV P + P Q +E++L
Sbjct: 956 EIFDAEFHDGVNNQNRSNSVPIDRSSLLLKFDPLLGAPV---PV--NHPNQ---QEQALQ 1007
Query: 162 DSAKLLGTSELNESVNSLSIKENESLNGNCATSTPSGTAHTA 203
+ +LG+++ + S +++E+E+ +GN + S TA
Sbjct: 1008 N---ILGSNQHQNRLLSPTLEEHETSDGNQSFGVISSAKDTA 1046
Score = 52 (23.4 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 26/109 (23%), Positives = 43/109 (39%)
Query: 98 PNTAELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEE 157
P T E + E DEC P + + S ++ D L+S + ++ + ME
Sbjct: 24 PTTME-ALEAASPADECSTPRDKGGVTLVSAHL--DSLLESASEELQRLEGKHCELFMES 80
Query: 158 --------ESLNDSAKLLGT--SELNESVNSLSIKENESLNGNCATSTP 196
E DS + + SE+N ++N +S E E L +P
Sbjct: 81 ISNPLPAPEDSTDSREEIQKFLSEINFNLNQVSANEMEHLQAMSGELSP 129
Score = 38 (18.4 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 75 DLLENEIPVNLMEDENLNKSEAGPNTAELS------KEDFQTGDECKAPISESELRKQSL 128
D+++N+ ++ N N + N ++ K + ++ + + E ELR+++L
Sbjct: 1067 DVIDNDCN-KTFDNSNTNTEDKTHNYNDMDELEKKIKNEVTRSEDIEKKLKEGELREEAL 1125
>UNIPROTKB|F1NCL7 [details] [associations]
symbol:TACC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0030953 "astral microtubule
organization" evidence=IEA] [GO:0032886 "regulation of
microtubule-based process" evidence=IEA] [GO:0042994 "cytoplasmic
sequestering of transcription factor" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] GO:GO:0005737
GO:GO:0005813 GO:GO:0006950 GO:GO:0008283 GO:GO:0051726
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0042994
GO:GO:0032886 PANTHER:PTHR13924 GeneTree:ENSGT00530000063855
CTD:10460 KO:K14283 OMA:LEGYRKN EMBL:AADN02014928 EMBL:AADN02014929
IPI:IPI00604253 RefSeq:NP_001004429.2 UniGene:Gga.9887
Ensembl:ENSGALT00000025333 GeneID:422899 KEGG:gga:422899
NextBio:20825460 Uniprot:F1NCL7
Length = 890
Score = 261 (96.9 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 58/163 (35%), Positives = 94/163 (57%)
Query: 233 KMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERSK 292
K++ ++E TITQ + V L + E +F+++ ++E+ K
Sbjct: 725 KVVAEFEGTITQMMEDSQKQKELSKKEIQRMVEEKQQVISDLNSMEKSFSELFKRFEKQK 784
Query: 293 VIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEME 351
++EG + NE+ L+ E +KK+ +Y ALK HA +L +AN+++ +RNK + E
Sbjct: 785 EVLEGYRKNEEALKKCAEEYLARIKKEEQRYQALKAHAEEKLHQANEEIAQVRNKA-KSE 843
Query: 352 TTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
T L+A L+K +M+I SL+ SL +KT+EN ELT ICDDLI K+
Sbjct: 844 TAALQASLRKEQMRIQSLERSLEQKTKENDELTKICDDLILKM 886
Score = 82 (33.9 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 120 ESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQS-IMEEE----SLNDSAKLLGTSELNE 174
ES LRKQSLY++FDP L+ R++P + + IM ++D +KLL E +
Sbjct: 567 ESALRKQSLYLKFDPLLRDSPRKQPIFGTIEANTDIMTAPLQCGPISDLSKLL--EETEK 624
Query: 175 SVNSLSIKENES---LNGNCATSTP 196
+SL +E L G T P
Sbjct: 625 PTSSLQNEEKPKGLDLLGTFTTPDP 649
Score = 55 (24.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 27/130 (20%), Positives = 59/130 (45%)
Query: 75 DLLENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISESELRKQSLY-VQFD 133
+ L++++ + + + K+EA + E++K+ + P E ++ + Y + FD
Sbjct: 92 EALQDDLSMPISTVISQQKTEA--SDTEINKQMPEKVSAAPYPDDEMPVKSRGSYNLDFD 149
Query: 134 PFLK-SPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLSIKENESLNGNCA 192
+P + +++ P +++ + S+ TSE ES NSL + S + +
Sbjct: 150 NLNDINPFQSSMQLQNSPGN--LQKSPVRVSSSPEKTSE--ESSNSLPLDNTASPSTTAS 205
Query: 193 TSTPSGTAHT 202
T PS +T
Sbjct: 206 TEYPSEQDNT 215
>UNIPROTKB|F1S8S7 [details] [associations]
symbol:TACC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0042994 "cytoplasmic sequestering of transcription factor"
evidence=IEA] [GO:0032886 "regulation of microtubule-based process"
evidence=IEA] [GO:0030953 "astral microtubule organization"
evidence=IEA] [GO:0030097 "hemopoiesis" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005813 GO:GO:0021987
GO:GO:0006950 GO:GO:0022008 GO:GO:0051726 GO:GO:0030097
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0042994
GO:GO:0022027 GO:GO:0032886 PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 CTD:10460 KO:K14283 OMA:LEGYRKN
EMBL:FP102127 RefSeq:XP_003128852.1 UniGene:Ssc.4976
Ensembl:ENSSSCT00000009494 GeneID:100513802 KEGG:ssc:100513802
Uniprot:F1S8S7
Length = 740
Score = 251 (93.4 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 54/163 (33%), Positives = 97/163 (59%)
Query: 233 KMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERSK 292
K+++ +E T+ Q + + V LR+ E +F+++ ++E+ K
Sbjct: 576 KIMDRFEETVYQAMEEAQKQKELARVEVQKALQEQEHVSGDLRSVEKSFSELFRRFEKQK 635
Query: 293 VIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEME 351
+IEG + NE L+ E E L+K+ +Y ALK HA +L+ A++++ +R++ + E
Sbjct: 636 EVIEGYRTNEASLKKCVEEYMERLEKEGQRYQALKAHAEEKLQLASEEMAQVRSRA-QAE 694
Query: 352 TTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
L+A+LKK +M++ SL++++ +KT+EN ELT ICDDLISK+
Sbjct: 695 VLALQAVLKKEQMRVQSLEKAMEQKTKENDELTRICDDLISKM 737
Score = 80 (33.2 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 120 ESELRKQSLYVQFDPFLK-SPVRQKPSIKSPPTQSIMEEES 159
+S LRKQSLY++FDP L+ SP R P+ P + M+ S
Sbjct: 453 DSALRKQSLYLKFDPLLQDSPRRPAPTGPKPSSACGMDAPS 493
>UNIPROTKB|Q9PTG8 [details] [associations]
symbol:tacc3 "Transforming acidic coiled-coil-containing
protein 3" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031369 "translation initiation factor
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IPI]
GO:GO:0005737 GO:GO:0043234 GO:GO:0017148 InterPro:IPR007707
Pfam:PF05010 PANTHER:PTHR13924 CTD:10460 HOVERGEN:HBG044999
KO:K14283 EMBL:AF200212 EMBL:BC094101 RefSeq:NP_001081964.1
UniGene:Xl.25749 DIP:DIP-29250N IntAct:Q9PTG8 MINT:MINT-119799
GeneID:398145 KEGG:xla:398145 Xenbase:XB-GENE-865032 Uniprot:Q9PTG8
Length = 931
Score = 250 (93.1 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 55/163 (33%), Positives = 93/163 (57%)
Query: 233 KMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERSK 292
K++ ++E TITQ + VQ+ L + E +F+++ + E+ K
Sbjct: 767 KIIAEFEGTITQILEDSQRQKETAKLELNKVLQEKQQVQVDLNSMETSFSELFKRLEKQK 826
Query: 293 VIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEME 351
+EG + NE+ L+ + +KK+ +Y ALK HA +L +AN+++ +R+K + E
Sbjct: 827 EALEGYRKNEEALKKCVEDYLVRIKKEEQRYQALKAHAEEKLNRANEEIAHVRSKA-KSE 885
Query: 352 TTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
T L+A L+K +M+I SL+ SL +K++EN ELT ICDD I K+
Sbjct: 886 ATALQATLRKEQMKIQSLERSLEQKSKENDELTKICDDFILKM 928
Score = 77 (32.2 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 33/88 (37%), Positives = 43/88 (48%)
Query: 120 ESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGT-SELNESVNS 178
ES LRKQSLY++FDP L R+ P KS +++ L S+ L G E N +
Sbjct: 619 ESVLRKQSLYLKFDPLL----RESPK-KSAAGINLLPSVPLKCSSDLFGAIPEANFPLIP 673
Query: 179 LSIKENESLNGNCATSTPSGTAHTANLI 206
SI+ E G T + A TA LI
Sbjct: 674 -SIENEEKPKGLDLLGTFT-VADTALLI 699
>UNIPROTKB|A6QL93 [details] [associations]
symbol:TACC3 "TACC3 protein" species:9913 "Bos taurus"
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0042994
"cytoplasmic sequestering of transcription factor" evidence=IEA]
[GO:0032886 "regulation of microtubule-based process" evidence=IEA]
[GO:0030953 "astral microtubule organization" evidence=IEA]
[GO:0030097 "hemopoiesis" evidence=IEA] [GO:0022027 "interkinetic
nuclear migration" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] GO:GO:0005737 GO:GO:0005813 GO:GO:0021987
GO:GO:0006950 GO:GO:0022008 GO:GO:0051726 GO:GO:0030097
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0042994
GO:GO:0022027 GO:GO:0032886 PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 CTD:10460 eggNOG:NOG68914
HOGENOM:HOG000294059 HOVERGEN:HBG044999 KO:K14283 OMA:LEGYRKN
OrthoDB:EOG4H9XK8 EMBL:DAAA02018566 EMBL:BC147883 IPI:IPI00689427
RefSeq:NP_001093775.1 UniGene:Bt.59859 STRING:A6QL93
Ensembl:ENSBTAT00000054961 GeneID:506194 KEGG:bta:506194
InParanoid:A6QL93 NextBio:20867492 Uniprot:A6QL93
Length = 810
Score = 240 (89.5 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 50/163 (30%), Positives = 95/163 (58%)
Query: 233 KMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERSK 292
K+++ +E T+ Q + + + L + E +F+D+ ++E+ K
Sbjct: 646 KIMDSFEGTVYQVMEESQKQKELTKAEMQKVLKEKAQLTADLHSMEKSFSDLFKRFEKQK 705
Query: 293 VIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEME 351
+IEG + NE+ L+ + E ++K+ KY ALK A +L +A++++ +R+K + +
Sbjct: 706 EVIEGYRTNEESLKKCVEDYIERVEKEAQKYQALKAQAEEKLRQASEEIAQVRSKA-QTD 764
Query: 352 TTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
L+A+L+K +M++ SL++ + +KT+EN ELT ICDDLISK+
Sbjct: 765 ALALQAVLRKEQMRVHSLEKVVEQKTKENDELTRICDDLISKM 807
Score = 78 (32.5 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 20/37 (54%), Positives = 22/37 (59%)
Query: 116 AP-ISESELRKQSLYVQFDPFLK-SPVRQKPSIKSPP 150
AP ES LRKQSLY+ FDP L+ SP PS P
Sbjct: 488 APSFKESALRKQSLYLNFDPLLQDSPQGLTPSSSGRP 524
Score = 45 (20.9 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 171 ELNESVNSLSIKENESLNGNCA 192
+L+ +V + KENE L G CA
Sbjct: 615 DLDSAVEATQ-KENEVLRGKCA 635
>RGD|1302948 [details] [associations]
symbol:Tacc3 "transforming, acidic coiled-coil containing
protein 3" species:10116 "Rattus norvegicus" [GO:0000226
"microtubule cytoskeleton organization" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006950 "response to stress" evidence=ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO] [GO:0022027
"interkinetic nuclear migration" evidence=ISO] [GO:0030097
"hemopoiesis" evidence=ISO] [GO:0030953 "astral microtubule
organization" evidence=ISO] [GO:0032886 "regulation of
microtubule-based process" evidence=ISO] [GO:0042994 "cytoplasmic
sequestering of transcription factor" evidence=ISO] [GO:0051726
"regulation of cell cycle" evidence=ISO] RGD:1302948 GO:GO:0005737
GO:GO:0005813 GO:GO:0021987 GO:GO:0006950 GO:GO:0022008
GO:GO:0051726 GO:GO:0030097 GO:GO:0030953 InterPro:IPR007707
Pfam:PF05010 GO:GO:0042994 GO:GO:0022027 GO:GO:0032886
PANTHER:PTHR13924 GeneTree:ENSGT00530000063855 OrthoDB:EOG4H9XK8
IPI:IPI00470219 Ensembl:ENSRNOT00000032972 Uniprot:D3Z962
Length = 587
Score = 226 (84.6 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 46/122 (37%), Positives = 83/122 (68%)
Query: 274 LRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQ 333
L + E +F+D+ ++E+ K +IEG + NED L+ + ++ K+ +Y ALK HA +
Sbjct: 463 LNSMEKSFSDLFKRFEKQKEVIEGYQKNEDSLKKCVEDYIVKIGKEGQRYQALKAHAEEK 522
Query: 334 LEKANQDL-DLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLIS 392
L+ AN+++ +R+K + E L+A L+K+++QI SL++++ +KT+EN EL ICD+LI+
Sbjct: 523 LKMANEEIAQVRSKA-QAEALALQASLRKAQLQIQSLEKTVEQKTKENDELNRICDELIA 581
Query: 393 KL 394
K+
Sbjct: 582 KM 583
Score = 94 (38.1 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 120 ESELRKQSLYVQFDPFLK-SPVRQKPSIKSPPTQSIME-EES 159
ES RKQSLY++FDP LK SP+R P +P T S + EES
Sbjct: 298 ESAWRKQSLYLKFDPLLKESPLRSMPVPVAPVTNSTQDTEES 339
Score = 51 (23.0 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIME--EESLNDSAKLLGT-SELN 173
P+ ES + + +P + PV P + +++ EES D A++LG +E++
Sbjct: 228 PVPESSHQGPEPLLDSEP-VTLPVEPVPESSHQGPEPLLDPKEESFRDPAEVLGAGAEVD 286
Query: 174 --ESVNSLSIKEN 184
E + S KE+
Sbjct: 287 YLEQFGTSSFKES 299
>MGI|MGI:1341163 [details] [associations]
symbol:Tacc3 "transforming, acidic coiled-coil containing
protein 3" species:10090 "Mus musculus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA;TAS] [GO:0006950 "response to
stress" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0022027
"interkinetic nuclear migration" evidence=IMP] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0030953 "astral microtubule
organization" evidence=IDA] [GO:0032886 "regulation of
microtubule-based process" evidence=IMP] [GO:0042994 "cytoplasmic
sequestering of transcription factor" evidence=IDA] [GO:0051726
"regulation of cell cycle" evidence=IGI] MGI:MGI:1341163
GO:GO:0005737 GO:GO:0005813 GO:GO:0021987 GO:GO:0006950
GO:GO:0022008 GO:GO:0051726 GO:GO:0030097 GO:GO:0030953
InterPro:IPR007707 Pfam:PF05010 GO:GO:0042994 GO:GO:0022027
GO:GO:0032886 PANTHER:PTHR13924 eggNOG:NOG68914
HOGENOM:HOG000294059 OrthoDB:EOG4H9XK8 EMBL:AF156934 EMBL:AF093542
IPI:IPI00120968 IPI:IPI00227909 UniGene:Mm.379024
ProteinModelPortal:Q9JJ11 SMR:Q9JJ11 IntAct:Q9JJ11 STRING:Q9JJ11
PhosphoSite:Q9JJ11 PaxDb:Q9JJ11 PRIDE:Q9JJ11 HOVERGEN:HBG098556
Genevestigator:Q9JJ11 Uniprot:Q9JJ11
Length = 631
Score = 220 (82.5 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 47/121 (38%), Positives = 78/121 (64%)
Query: 274 LRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQ 333
L + E +F+D+ ++E+ K +IEG + NE+ L+ E +++K+ +Y ALK HA +
Sbjct: 508 LNSMEKSFSDLFKRFEKRKEVIEGYQKNEESLKKYVGECIVKIEKEGQRYQALKIHAEEK 567
Query: 334 LEKANQDLDLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISK 393
L AN+++ + + E L+A L+K++MQ SL+ +L +KT+E ELT ICDDLISK
Sbjct: 568 LRLANEEIAQVHSKAQAEVLALQASLRKAQMQNHSLEMTLEQKTKEIDELTRICDDLISK 627
Query: 394 L 394
+
Sbjct: 628 M 628
Score = 101 (40.6 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 34/85 (40%), Positives = 43/85 (50%)
Query: 83 VNLMEDENLNKSEAGPNTAELSK-EDFQTGDECKAPISESELRKQSLYVQFDPFLK-SPV 140
V+L E+ + SE AE+ E F T ES RKQSLYV+FDP LK SP+
Sbjct: 307 VDLKEESFRDPSEVLGTGAEVDYLEQFGTSS-----FKESAWRKQSLYVKFDPLLKDSPL 361
Query: 141 RQKPSIKSPPTQSIMEEESLNDSAK 165
R P +P T S + E + S K
Sbjct: 362 RPMPV--APITNSTQDTEEESGSGK 384
Score = 46 (21.3 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 155 MEEESLNDSAKLLGT-SELN--ESVNSLSIKEN 184
++EES D +++LGT +E++ E + S KE+
Sbjct: 309 LKEESFRDPSEVLGTGAEVDYLEQFGTSSFKES 341
Score = 40 (19.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 29/129 (22%), Positives = 52/129 (40%)
Query: 64 EVVNLSGHSDRDL-LENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISESE 122
E+VNL D D+ + PV +E L +E + + S++D D + +
Sbjct: 389 ELVNLDFLGDLDVPVSAPTPVWSLEPRGLLPAEPIVDVLKYSQKDL---DAVVNVMQQEN 445
Query: 123 LRKQSLYVQFDP-FLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLSI 181
L +S Y + +L+ KS + +SL ++ K E+ E +
Sbjct: 446 LELKSKYEDLNTKYLEMG-------KSVDEFEKIAYKSLEEAEKQRELKEIAEDKIQKVL 498
Query: 182 KENESLNGN 190
KE + LN +
Sbjct: 499 KERDQLNAD 507
>UNIPROTKB|E2RGF0 [details] [associations]
symbol:TACC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0042994 "cytoplasmic sequestering of
transcription factor" evidence=IEA] [GO:0032886 "regulation of
microtubule-based process" evidence=IEA] [GO:0030953 "astral
microtubule organization" evidence=IEA] [GO:0030097 "hemopoiesis"
evidence=IEA] [GO:0022027 "interkinetic nuclear migration"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0006950 "response to
stress" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005813
GO:GO:0021987 GO:GO:0006950 GO:GO:0022008 GO:GO:0051726
GO:GO:0030097 GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010
GO:GO:0042994 GO:GO:0022027 GO:GO:0032886 PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 OMA:LEGYRKN EMBL:AAEX03002462
Ensembl:ENSCAFT00000023795 Uniprot:E2RGF0
Length = 788
Score = 228 (85.3 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 50/168 (29%), Positives = 93/168 (55%)
Query: 228 NASYQKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLK 287
N K+++ +E + Q + + + L + E +F+D+ +
Sbjct: 619 NLEMGKIMDGFEGIVYQAMEEAQKQKELAKAEIQKILKEKDQLAADLSSMEKSFSDLFKR 678
Query: 288 YERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNK 346
+E+ K +IEG NE+ L+ + ++K+ +Y ALK HA +L+ A++++ +R+K
Sbjct: 679 FEKQKEVIEGYHTNEESLKKCVEDYIVRIEKEGQRYQALKAHAEEKLKLASEEIAQVRSK 738
Query: 347 TYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
+ E +A L+K +M+I SL++++ +KT+EN ELT ICDDLISK+
Sbjct: 739 A-QAEALAFQASLRKEQMRIQSLEKTVEQKTKENEELTRICDDLISKM 785
Score = 87 (35.7 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 120 ESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSA 164
ES LRKQSLY++FDP LK R +P +P T S ++S D A
Sbjct: 497 ESALRKQSLYLKFDPLLKDSPR-RPVPVAPETNST--QDSTQDMA 538
Score = 39 (18.8 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 147 KSPPTQSIMEEESLNDSAKLLGT-SELN--ESVNSLSIKEN 184
+ P S +EE D ++LGT +E++ E S KE+
Sbjct: 458 QDPEPASDPKEECFRDPTEVLGTGAEVDYLEQFGSSLFKES 498
>UNIPROTKB|Q9Y6A5 [details] [associations]
symbol:TACC3 "Transforming acidic coiled-coil-containing
protein 3" species:9606 "Homo sapiens" [GO:0006950 "response to
stress" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0030953 "astral microtubule
organization" evidence=IEA] [GO:0032886 "regulation of
microtubule-based process" evidence=IEA] [GO:0042994 "cytoplasmic
sequestering of transcription factor" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] GO:GO:0005737
GO:GO:0005813 GO:GO:0021987 Pathway_Interaction_DB:aurora_a_pathway
GO:GO:0006950 GO:GO:0022008 GO:GO:0051726 GO:GO:0030097
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0042994
GO:GO:0022027 GO:GO:0032886 PANTHER:PTHR13924 EMBL:AF093543
EMBL:AJ243997 EMBL:BC106071 IPI:IPI00002135 RefSeq:NP_006333.1
UniGene:Hs.104019 ProteinModelPortal:Q9Y6A5 SMR:Q9Y6A5
IntAct:Q9Y6A5 STRING:Q9Y6A5 PhosphoSite:Q9Y6A5 DMDM:13431939
PaxDb:Q9Y6A5 PeptideAtlas:Q9Y6A5 PRIDE:Q9Y6A5
Ensembl:ENST00000313288 GeneID:10460 KEGG:hsa:10460 UCSC:uc003gdo.3
CTD:10460 GeneCards:GC04P001690 HGNC:HGNC:11524 HPA:CAB010111
HPA:HPA005781 HPA:HPA022039 MIM:605303 neXtProt:NX_Q9Y6A5
PharmGKB:PA36301 eggNOG:NOG68914 HOGENOM:HOG000294059
HOVERGEN:HBG044999 InParanoid:Q9Y6A5 KO:K14283 OMA:LEGYRKN
OrthoDB:EOG4H9XK8 PhylomeDB:Q9Y6A5 GenomeRNAi:10460 NextBio:39663
ArrayExpress:Q9Y6A5 Bgee:Q9Y6A5 CleanEx:HS_TACC3
Genevestigator:Q9Y6A5 GermOnline:ENSG00000013810 Uniprot:Q9Y6A5
Length = 838
Score = 234 (87.4 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 51/168 (30%), Positives = 94/168 (55%)
Query: 228 NASYQKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLK 287
N K+++ +E + Q + + + L + E +F+D+ +
Sbjct: 669 NLELGKIMDRFEEVVYQAMEEVQKQKELSKAEIQKVLKEKDQLTTDLNSMEKSFSDLFKR 728
Query: 288 YERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNK 346
+E+ K +IEG + NE+ L+ + + ++ +Y ALK HA +L+ AN+++ +R+K
Sbjct: 729 FEKQKEVIEGYRKNEESLKKCVEDYLARITQEGQRYQALKAHAEEKLQLANEEIAQVRSK 788
Query: 347 TYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
+ E L+A L+K +M+I SL++++ +KT+EN ELT ICDDLISK+
Sbjct: 789 A-QAEALALQASLRKEQMRIQSLEKTVEQKTKENEELTRICDDLISKM 835
Score = 77 (32.2 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 120 ESELRKQSLYVQFDPFLK-SPVRQKP 144
ES LRKQSLY++FDP L+ SP R P
Sbjct: 551 ESALRKQSLYLKFDPLLRDSPGRPVP 576
Score = 49 (22.3 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 155 MEEESLNDSAKLLGT-SELN--ESVNSLSIKEN 184
++EES D A++LGT +E++ E + S KE+
Sbjct: 520 LKEESFRDPAEVLGTGAEVDYLEQFGTSSFKES 552
Score = 39 (18.8 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 191 CA-TSTPSGTAHTANLIS 207
CA TS P TA T +L++
Sbjct: 293 CAHTSAPESTAPTNHLVA 310
>UNIPROTKB|G8JLK4 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
GO:GO:0005737 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 EMBL:AC067817 HGNC:HGNC:11522 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AC016813 ProteinModelPortal:G8JLK4
Ensembl:ENST00000443286 Bgee:G8JLK4 Uniprot:G8JLK4
Length = 792
Score = 235 (87.8 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 626 RKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 685
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 686 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 744
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 745 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 788
Score = 56 (24.8 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 82 PVNLMEDENLNKSEAGPNTAELSKE-DFQTGDECK--APISESELRK 125
P + ++DE + + G T E S E D + G+ C P S+LRK
Sbjct: 203 PPDALQDEAMTEGSMGV-TLEASAEADLKAGNSCPELVPSRRSKLRK 248
>UNIPROTKB|O75410 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0032886 "regulation of
microtubule-based process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0015630 "microtubule
cytoskeleton" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] GO:GO:0005634 GO:GO:0005737
GO:GO:0021987 GO:GO:0000226 Pathway_Interaction_DB:aurora_a_pathway
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0022008
GO:GO:0015630 EMBL:CH471080 GO:GO:0005815 GO:GO:0007049
GO:GO:0045111 InterPro:IPR007707 Pfam:PF05010 GO:GO:0022027
GO:GO:0032886 EMBL:AF049910 EMBL:AY177411 EMBL:AY139007
EMBL:AK314620 EMBL:BC041391 EMBL:AB029026 EMBL:AY039239
EMBL:AY072874 EMBL:AY072875 EMBL:AY072876 IPI:IPI00025683
IPI:IPI00216765 IPI:IPI00332794 IPI:IPI00428263 IPI:IPI00549229
IPI:IPI00550248 IPI:IPI00550465 IPI:IPI00550627
RefSeq:NP_001116296.1 RefSeq:NP_001139688.1 RefSeq:NP_006274.2
UniGene:Hs.279245 ProteinModelPortal:O75410 SMR:O75410
IntAct:O75410 STRING:O75410 PhosphoSite:O75410 PaxDb:O75410
PRIDE:O75410 DNASU:6867 Ensembl:ENST00000276520
Ensembl:ENST00000317827 Ensembl:ENST00000330691
Ensembl:ENST00000348567 Ensembl:ENST00000379931
Ensembl:ENST00000518415 Ensembl:ENST00000520615
Ensembl:ENST00000521050 Ensembl:ENST00000521642 GeneID:6867
KEGG:hsa:6867 UCSC:uc003xlz.3 UCSC:uc003xma.3 UCSC:uc003xmb.4
UCSC:uc003xmf.4 UCSC:uc003xmh.4 CTD:6867 GeneCards:GC08P038586
H-InvDB:HIX0007462 HGNC:HGNC:11522 HPA:CAB017041 HPA:HPA024702
MIM:605301 neXtProt:NX_O75410 PharmGKB:PA36299 eggNOG:NOG83363
HOVERGEN:HBG105967 KO:K14281 OMA:SSDTNDS PhylomeDB:O75410
ChiTaRS:TACC1 GenomeRNAi:6867 NextBio:26803 PMAP-CutDB:O75410
ArrayExpress:O75410 Bgee:O75410 Genevestigator:O75410
GermOnline:ENSG00000147526 PANTHER:PTHR13924 Uniprot:O75410
Length = 805
Score = 235 (87.8 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 639 RKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 698
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 699 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 757
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 758 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 801
Score = 56 (24.8 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 82 PVNLMEDENLNKSEAGPNTAELSKE-DFQTGDECK--APISESELRK 125
P + ++DE + + G T E S E D + G+ C P S+LRK
Sbjct: 187 PPDALQDEAMTEGSMGV-TLEASAEADLKAGNSCPELVPSRRSKLRK 232
>RGD|1303004 [details] [associations]
symbol:Tacc2 "transforming, acidic coiled-coil containing
protein 2" species:10116 "Rattus norvegicus" [GO:0000226
"microtubule cytoskeleton organization" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO] [GO:0022027
"interkinetic nuclear migration" evidence=ISO] [GO:0030953 "astral
microtubule organization" evidence=ISO] [GO:0032886 "regulation of
microtubule-based process" evidence=ISO] [GO:0035257 "nuclear
hormone receptor binding" evidence=ISO] RGD:1303004
InterPro:IPR007707 Pfam:PF05010 PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 CTD:10579 KO:K14282 IPI:IPI00470218
RefSeq:NP_001004418.1 UniGene:Rn.13989 ProteinModelPortal:D4A858
Ensembl:ENSRNOT00000047161 GeneID:309025 KEGG:rno:309025
UCSC:RGD:1303004 NextBio:660012 ArrayExpress:D4A858 Uniprot:D4A858
Length = 1129
Score = 222 (83.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 964 RKIVAEYEKTIAQMIEDEQREKSISHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 1023
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 1024 KEVLEGFRKNEEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 1082
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 1083 EQAAYQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 1126
Score = 67 (28.6 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 30/104 (28%), Positives = 46/104 (44%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAKLL--- 167
P + +KQ+LY+ FD +SPV+ P + PT S + E+L N +AKL
Sbjct: 717 PQDDDTPKKQALYLMFDTPQESPVKSPPVRMSDSPTPCSGSSFEDTEALVNATAKLQHPV 776
Query: 168 --GTSELNESVNSLSIKENESLNGNCATSTPSGTAHTANLISPE 209
G + E + L K ++ A TP A + +PE
Sbjct: 777 PRGLASNQEPLLQLPEKSSQKELEAMALGTP---AEAIEITAPE 817
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 6 QTN-PPTKQLKKKSLPKEP 23
Q N PPTK++ KK + K P
Sbjct: 465 QENAPPTKKIGKKPVAKMP 483
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 134 PFLKSPVRQKPSIKSPPTQSIMEEESLNDSA 164
P +PV+ P+ PP + E E + A
Sbjct: 142 PESTTPVKAPPAPPPPPPEVTPEPEVIEPPA 172
>RGD|1303120 [details] [associations]
symbol:Tacc1 "transforming, acidic coiled-coil containing
protein 1" species:10116 "Rattus norvegicus" [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0021987 "cerebral cortex development"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0032886 "regulation of microtubule-based process"
evidence=IEA;ISO] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA;ISO] RGD:1303120 GO:GO:0021987 GO:GO:0000226
GO:GO:0022008 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 GO:GO:0022027 GO:GO:0032886 CTD:6867 KO:K14281
PANTHER:PTHR13924 GeneTree:ENSGT00530000063855 OrthoDB:EOG4RJG22
IPI:IPI00470311 RefSeq:NP_001004107.1 UniGene:Rn.220272
UniGene:Rn.73645 ProteinModelPortal:D4A927 PRIDE:D4A927
Ensembl:ENSRNOT00000035347 GeneID:306562 KEGG:rno:306562
UCSC:RGD:1303120 NextBio:656212 ArrayExpress:D4A927 Uniprot:D4A927
Length = 772
Score = 234 (87.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 69/244 (28%), Positives = 115/244 (47%)
Query: 155 MEEESLNDSAKLLGTSELNESVNSLSIKENESLNGNC---ATSTPSGTAHTANLISPERN 211
MEEE L LL TS V S++ L+G C A T T +I+ E
Sbjct: 530 MEEEELTVHG-LLETSSEKAPV-SVACGGESPLDGICLSEADKTAVLTLIREEIITKEIE 587
Query: 212 STSXXXXXXXXXXXXXNASYQKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQ 271
+ +K++ +YE TI Q +
Sbjct: 588 ANEWKKKYEETREEVLEM--RKIVAEYEKTIAQMIEDEQRTNMSSQKSFQQLTMEKEQAL 645
Query: 272 LHLRNSEIAFNDVHLKYERSKVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAI 331
L + E + +D+ +YE K ++EG K NE+ L+ + +K++ +Y ALK HA
Sbjct: 646 ADLNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHAE 705
Query: 332 SQLEKANQDL-DLRNKTYEMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDL 390
+L++AN+++ +R+K + E+ L A L++ +M++ SL+ +L +K +E ELT ICD+L
Sbjct: 706 EKLDRANEEIAQVRSKA-KAESAALHAGLRREQMKVESLERALQQKNQEIEELTKICDEL 764
Query: 391 ISKL 394
I+KL
Sbjct: 765 IAKL 768
Score = 54 (24.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 74 RDLLENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFD 133
R L ++ P+NL E +++ + AG S D Q G +P+ + + V+
Sbjct: 275 RGLRAHKSPLNLKEAASIHCNSAGD-----SGVDLQEGSRA-SPLKLDDFTEDGRSVETR 328
Query: 134 PFL-KSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNE-SVNSLSIKE 183
L K P R KPS K P +I ++ S+K +G +L + ++ S+ +
Sbjct: 329 SALPKQPGR-KPSHKLAP--NIRKD----GSSKPVGVEQLTDPTIEDASLAQ 373
>MGI|MGI:2443510 [details] [associations]
symbol:Tacc1 "transforming, acidic coiled-coil containing
protein 1" species:10090 "Mus musculus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0019904 "protein
domain specific binding" evidence=IPI] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0032886 "regulation of microtubule-based process" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] MGI:MGI:2443510
GO:GO:0005634 GO:GO:0005737 GO:GO:0021987 GO:GO:0000226
GO:GO:0051301 GO:GO:0022008 GO:GO:0005815 GO:GO:0007049
InterPro:IPR007707 Pfam:PF05010 GO:GO:0022027 GO:GO:0032886
CTD:6867 eggNOG:NOG83363 HOVERGEN:HBG105967 KO:K14281 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AY177412 EMBL:AY177413 EMBL:BC125389
EMBL:BC145709 IPI:IPI00399972 IPI:IPI00420499 RefSeq:NP_796063.3
RefSeq:NP_955355.1 UniGene:Mm.308452 ProteinModelPortal:Q6Y685
SMR:Q6Y685 STRING:Q6Y685 PhosphoSite:Q6Y685 PaxDb:Q6Y685
PRIDE:Q6Y685 DNASU:320165 Ensembl:ENSMUST00000084512 GeneID:320165
KEGG:mmu:320165 UCSC:uc009lfs.1 UCSC:uc009lft.1
GeneTree:ENSGT00530000063855 HOGENOM:HOG000294120 InParanoid:Q6Y685
OrthoDB:EOG4RJG22 NextBio:396157 Bgee:Q6Y685 Genevestigator:Q6Y685
GermOnline:ENSMUSG00000065954 Uniprot:Q6Y685
Length = 774
Score = 234 (87.4 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 51/164 (31%), Positives = 90/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 608 RKIVAEYEKTIAQMIEDEQRTSMSSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 667
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L++AN+++ +R+K +
Sbjct: 668 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKVHAEEKLDRANEEIAQVRSKA-KA 726
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 727 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 770
Score = 48 (22.0 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 87 EDENLNKSEAGPNTAELSKEDFQTGDECKAPI-SESELRK 125
+DE + G ++ +TG C P+ S S+LRK
Sbjct: 193 QDEPVMDRGMGVTLEAFTEASLKTGGPCPEPVASRSKLRK 232
>UNIPROTKB|F1MSQ8 [details] [associations]
symbol:F1MSQ8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0032886 "regulation of microtubule-based process"
evidence=IEA] [GO:0022027 "interkinetic nuclear migration"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
GO:GO:0021987 GO:GO:0000226 GO:GO:0022008 GO:GO:0015630
GO:GO:0045111 InterPro:IPR007707 Pfam:PF05010 GO:GO:0022027
GO:GO:0032886 OMA:SSDTNDS PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 EMBL:DAAA02060864 EMBL:DAAA02060865
IPI:IPI01001413 Ensembl:ENSBTAT00000005554 Uniprot:F1MSQ8
Length = 729
Score = 235 (87.8 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 563 RKIVAEYEKTIAQMIEDEQRTSMSSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 622
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 623 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 681
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 682 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 725
Score = 45 (20.9 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 136 LKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLSIKENE 185
L+SPV + P + +S ++ L++S K + + E + + I+ NE
Sbjct: 498 LESPVEKTPVSVACGVESPLDGICLSESDKTAVLTLIREEIITKEIEANE 547
Score = 45 (20.9 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 118 ISESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVN 177
+ ++E ++ DP SP R +P + + + K LG SEL+E+
Sbjct: 194 VQDNEAMTAGAALEADPGAGSP-RPEPGAGR---SRLRKPRPVPLRKKALG-SELSEATP 248
Query: 178 SLSI-----KENESLNGNCATS---TPSGTAHTANLISPE 209
+L ++ ++ + CA TP G AH + PE
Sbjct: 249 ALEDMRPVGEDGKAGSQKCAPEMMETPGGDAHDSGAEQPE 288
>UNIPROTKB|H0YBT8 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
GO:GO:0005737 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 EMBL:AC067817 HGNC:HGNC:11522 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AC016813 Ensembl:ENST00000518809
Uniprot:H0YBT8
Length = 454
Score = 234 (87.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 52/164 (31%), Positives = 93/164 (56%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q ++++ + L + E + +D+ +YE
Sbjct: 289 RKIVAEYEKTIAQMIDEQRTSMTSQKSFQQLTMEKEQALA-DLNSVERSLSDLFRRYENL 347
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 348 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 406
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 407 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 450
>UNIPROTKB|F1MDB9 [details] [associations]
symbol:TACC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0032886 "regulation of microtubule-based process"
evidence=IEA] [GO:0030953 "astral microtubule organization"
evidence=IEA] [GO:0022027 "interkinetic nuclear migration"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
GO:GO:0005794 GO:GO:0021987 GO:GO:0005730 GO:GO:0022008
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0022027
GO:GO:0032886 PANTHER:PTHR13924 GeneTree:ENSGT00530000063855
EMBL:DAAA02059448 EMBL:DAAA02059449 IPI:IPI00924308
Ensembl:ENSBTAT00000061158 OMA:TAEVAEW ArrayExpress:F1MDB9
Uniprot:F1MDB9
Length = 2830
Score = 222 (83.2 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 2665 RKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 2724
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 2725 KEVLEGFRKNEEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 2783
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 2784 EQAAYQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 2827
Score = 66 (28.3 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 124 RKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAKL 166
+KQ+LY+ FD +SPV+ P + PT S E E+L N AK+
Sbjct: 2425 KKQALYLMFDTSQESPVKSPPVRMSESPTPCSGSSFEETEALLNTGAKI 2473
Score = 49 (22.3 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 6 QTNPPTKQLKKKSLPKEP 23
+T PPTK++ KK + K P
Sbjct: 2163 ETPPPTKKIGKKPVAKMP 2180
Score = 43 (20.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 67 NLSGHSDRDLL-ENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISE---SE 122
++S +DL+ ++ IP D SE A L G E P + +
Sbjct: 1769 DVSSQVSKDLIAQSTIPAAARVDLTAPASEY----ASLPSVPAGDGVEASTPSCQRLAKD 1824
Query: 123 LRKQSLYVQ-FD-PFLKSPVRQKPSIKSPPTQSIMEEE 158
L + S + F+ P +PV+ P+ PP + I E E
Sbjct: 1825 LSRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIAEPE 1862
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 3 RKYQTNPPTKQLKKKSLPKEP 23
R + PP+ LKKK + K+P
Sbjct: 2008 RTKKPRPPS--LKKKQITKKP 2026
>UNIPROTKB|E7EVI4 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
GO:GO:0005737 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 EMBL:AC067817 HGNC:HGNC:11522 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AC016813 IPI:IPI00976844
ProteinModelPortal:E7EVI4 SMR:E7EVI4 Ensembl:ENST00000520973
UCSC:uc011lcb.2 ArrayExpress:E7EVI4 Bgee:E7EVI4 Uniprot:E7EVI4
Length = 581
Score = 235 (87.8 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 415 RKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 474
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 475 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 533
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 534 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 577
>UNIPROTKB|E7ET87 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
GO:GO:0005737 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 EMBL:AC067817 HGNC:HGNC:11522 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AC016813 IPI:IPI00982286
ProteinModelPortal:E7ET87 SMR:E7ET87 Ensembl:ENST00000519416
UCSC:uc003xmc.4 ArrayExpress:E7ET87 Bgee:E7ET87 Uniprot:E7ET87
Length = 609
Score = 235 (87.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 443 RKIVAEYEKTIAQMIEDEQRTSMTSQKSFQQLTMEKEQALADLNSVERSLSDLFRRYENL 502
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 503 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 561
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 562 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 605
>UNIPROTKB|H0YAY0 [details] [associations]
symbol:TACC1 "Transforming acidic coiled-coil-containing
protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
GO:GO:0005737 GO:GO:0015630 GO:GO:0045111 InterPro:IPR007707
Pfam:PF05010 EMBL:AC067817 HGNC:HGNC:11522 ChiTaRS:TACC1
PANTHER:PTHR13924 EMBL:AC016813 Ensembl:ENST00000521866
Uniprot:H0YAY0
Length = 562
Score = 234 (87.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/164 (31%), Positives = 93/164 (56%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q ++++ + L + E + +D+ +YE
Sbjct: 397 RKIVAEYEKTIAQMIDEQRTSMTSQKSFQQLTMEKEQALA-DLNSVERSLSDLFRRYENL 455
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 456 KGVLEGFKKNEEALKKCAQDYLARVKQEEQRYQALKIHAEEKLDKANEEIAQVRTKA-KA 514
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 515 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 558
>UNIPROTKB|E1C586 [details] [associations]
symbol:Gga.42270 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0032886 "regulation of microtubule-based process" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
GO:GO:0000226 GO:GO:0015630 GO:GO:0008283 GO:GO:0045111
InterPro:IPR007707 Pfam:PF05010 GO:GO:0032886 PANTHER:PTHR13924
GeneTree:ENSGT00530000063855 EMBL:AADN02054845 EMBL:AADN02054846
EMBL:AADN02054847 EMBL:AADN02054848 IPI:IPI00573884
Ensembl:ENSGALT00000040710 ArrayExpress:E1C586 Uniprot:E1C586
Length = 802
Score = 235 (87.8 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 52/164 (31%), Positives = 89/164 (54%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + +D+ +YE
Sbjct: 636 RKIVAEYEKTIAQMIEDEQRTNMTSQKNLQQLTMEKDQALADLNSVERSLSDLFRRYENL 695
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG K NE+ L+ + +K++ +Y ALK HA +L+KAN+++ +R K +
Sbjct: 696 KGVLEGFKKNEEALKKCAQDYLNRVKQEEQRYQALKVHAEEKLDKANEEIAQVRTKA-KA 754
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E+ L A L+K +M++ SL+ +L +K +E ELT ICD+LI+KL
Sbjct: 755 ESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKL 798
>UNIPROTKB|E7EMZ9 [details] [associations]
symbol:TACC2 "Transforming acidic coiled-coil-containing
protein 2" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] GO:GO:0005794 GO:GO:0005730
InterPro:IPR007707 Pfam:PF05010 EMBL:AL731566 PANTHER:PTHR13924
EMBL:AL135793 EMBL:AC063960 IPI:IPI00935164 HGNC:HGNC:11523
ChiTaRS:TACC2 PRIDE:E7EMZ9 Ensembl:ENST00000515603 UCSC:uc009xzx.3
ArrayExpress:E7EMZ9 Bgee:E7EMZ9 Uniprot:E7EMZ9
Length = 2826
Score = 220 (82.5 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 2661 RKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 2720
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 2721 KEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 2779
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 2780 EQAAHQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 2823
Score = 68 (29.0 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAK 165
P + +KQ+LY+ FD +SPV+ P + PT S E E+L N +AK
Sbjct: 2491 PQDDDAPKKQALYLMFDTSQESPVKSSPVRMSESPTPCSGSSFEETEALVNTAAK 2545
Score = 56 (24.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 94 SEAGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPP--- 150
S P L+ + + TG S S K++ + P LK K ++PP
Sbjct: 2054 SSGNPEAVALAPDAYSTGSS-----SASSTLKRTKKPR-PPSLKKKQTTKKPTETPPVKE 2107
Query: 151 TQSIMEEESLNDSAKLLGTSELNESVNS 178
TQ +EESL S + L + ES +
Sbjct: 2108 TQQEPDEESLVPSGENLASETKTESAKT 2135
Score = 45 (20.9 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 6 QTNPP-TKQLKKKSLPKEP 23
Q NPP TK++ KK + K P
Sbjct: 2235 QENPPPTKKIGKKPVAKMP 2253
Score = 40 (19.1 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 134 PFLKSPVRQKPSIKSPPTQSIMEEE 158
P +PV+ P+ PP + I E E
Sbjct: 1911 PESTTPVKAPPAPPPPPPEVIPEPE 1935
>UNIPROTKB|E9PBC6 [details] [associations]
symbol:TACC2 "Transforming acidic coiled-coil-containing
protein 2" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] GO:GO:0005794 GO:GO:0005730
InterPro:IPR007707 Pfam:PF05010 EMBL:AL731566 PANTHER:PTHR13924
EMBL:AL135793 EMBL:AC063960 HGNC:HGNC:11523 ChiTaRS:TACC2
IPI:IPI00963962 Ensembl:ENST00000453444 Ensembl:ENST00000515273
UCSC:uc010qtv.2 Uniprot:E9PBC6
Length = 2875
Score = 220 (82.5 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 2710 RKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 2769
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 2770 KEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 2828
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 2829 EQAAHQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 2872
Score = 68 (29.0 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAK 165
P + +KQ+LY+ FD +SPV+ P + PT S E E+L N +AK
Sbjct: 2540 PQDDDAPKKQALYLMFDTSQESPVKSSPVRMSESPTPCSGSSFEETEALVNTAAK 2594
Score = 56 (24.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 94 SEAGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPP--- 150
S P L+ + + TG S S K++ + P LK K ++PP
Sbjct: 2103 SSGNPEAVALAPDAYSTGSS-----SASSTLKRTKKPR-PPSLKKKQTTKKPTETPPVKE 2156
Query: 151 TQSIMEEESLNDSAKLLGTSELNESVNS 178
TQ +EESL S + L + ES +
Sbjct: 2157 TQQEPDEESLVPSGENLASETKTESAKT 2184
Score = 45 (20.9 bits), Expect = 5.2e-17, Sum P(3) = 5.2e-17
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 6 QTNPP-TKQLKKKSLPKEP 23
Q NPP TK++ KK + K P
Sbjct: 2284 QENPPPTKKIGKKPVAKMP 2302
Score = 40 (19.1 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 134 PFLKSPVRQKPSIKSPPTQSIMEEE 158
P +PV+ P+ PP + I E E
Sbjct: 1960 PESTTPVKAPPAPPPPPPEVIPEPE 1984
>ZFIN|ZDB-GENE-050522-327 [details] [associations]
symbol:tacc3 "transforming, acidic coiled-coil
containing protein 3" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050522-327 InterPro:IPR007707
Pfam:PF05010 PANTHER:PTHR13924 CTD:10460 HOVERGEN:HBG044999
KO:K14283 EMBL:AY170618 IPI:IPI00503314 RefSeq:NP_997746.1
UniGene:Dr.78713 ProteinModelPortal:Q6Y8G7 STRING:Q6Y8G7
PRIDE:Q6Y8G7 GeneID:321283 KEGG:dre:321283 InParanoid:Q6Y8G7
NextBio:20807317 ArrayExpress:Q6Y8G7 Bgee:Q6Y8G7 Uniprot:Q6Y8G7
Length = 942
Score = 208 (78.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 46/162 (28%), Positives = 87/162 (53%)
Query: 234 MLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERSKV 293
+++++E TITQ ++ + L E +F+ V + +R K
Sbjct: 777 IMSEFETTITQITDEHKQKEALAKMEMERVLEEKDQLAKDLNELERSFSSVVKRLDRCKE 836
Query: 294 IIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEMET 352
+IEG K NE+ L+ + L+K+ +Y ALK HA +LE+AN+ + ++R K E
Sbjct: 837 VIEGFKKNEETLKQYAKNCMDRLQKEEKRYQALKAHAEEKLEQANKAIAEVRTKQ-GAEV 895
Query: 353 TKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
L+ LK+ ++++ SL++ L +K +E ++T +CD+L+ K+
Sbjct: 896 AALQVQLKREQLKVQSLEKDLEQKAKEVKDVTELCDELLLKV 937
Score = 74 (31.1 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 16/21 (76%), Positives = 18/21 (85%)
Query: 120 ESELRKQSLYVQFDPFLK-SP 139
ES LRKQSLY++FDP LK SP
Sbjct: 633 ESALRKQSLYLKFDPLLKESP 653
Score = 38 (18.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 137 KSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNS 178
+ PV +K S ++ I +++ N L G S+ + +N+
Sbjct: 63 RDPVTKKIMSPSRTSRPISQDDHKNALETLTGLSDQSSLMNN 104
Score = 37 (18.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 78 ENEIPVNLMED----ENLNKSEAGPNTAELSKEDFQTGDECKAPISESELRKQS 127
EN + NL E E++ S A P+T + D P S ++++ Q+
Sbjct: 538 ENMVEANLPETKELAEDVESSMAVPHTDKPQNPAVPEPDFMAVPESIADIQNQT 591
>UNIPROTKB|O95359 [details] [associations]
symbol:TACC2 "Transforming acidic coiled-coil-containing
protein 2" species:9606 "Homo sapiens" [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0030953 "astral microtubule organization" evidence=IEA]
[GO:0032886 "regulation of microtubule-based process" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0005794 GO:GO:0021987 GO:GO:0005730 GO:GO:0022008
GO:GO:0005815 eggNOG:NOG12793 GO:GO:0030953 InterPro:IPR007707
Pfam:PF05010 GO:GO:0022027 GO:GO:0032886 GO:GO:0035257
PANTHER:PTHR13924 EMBL:AF176646 EMBL:AF095791 EMBL:AF528098
EMBL:AF528099 EMBL:AL135793 EMBL:AC063960 EMBL:BC000999
EMBL:BC039311 EMBL:AF220152 EMBL:AL713712 IPI:IPI00030033
IPI:IPI00384450 IPI:IPI00410127 IPI:IPI00642773 IPI:IPI00643465
IPI:IPI00935164 RefSeq:NP_008928.1 RefSeq:NP_996742.1
RefSeq:NP_996743.1 RefSeq:NP_996744.2 UniGene:Hs.501252
UniGene:Hs.713875 ProteinModelPortal:O95359 IntAct:O95359
MINT:MINT-1203853 STRING:O95359 PhosphoSite:O95359 PaxDb:O95359
PRIDE:O95359 Ensembl:ENST00000260733 Ensembl:ENST00000334433
Ensembl:ENST00000358010 Ensembl:ENST00000360561
Ensembl:ENST00000369000 Ensembl:ENST00000369005
Ensembl:ENST00000513429 GeneID:10579 KEGG:hsa:10579 UCSC:uc001lfv.3
UCSC:uc001lfw.3 UCSC:uc001lfy.3 UCSC:uc001lfz.3 UCSC:uc001lga.3
CTD:10579 GeneCards:GC10P123738 HGNC:HGNC:11523 HPA:HPA031020
MIM:605302 neXtProt:NX_O95359 PharmGKB:PA36300 HOVERGEN:HBG093142
InParanoid:O95359 KO:K14282 OMA:ECKVSTR OrthoDB:EOG44QT02
PhylomeDB:O95359 ChiTaRS:TACC2 GenomeRNAi:10579 NextBio:40155
ArrayExpress:O95359 Bgee:O95359 Genevestigator:O95359
GermOnline:ENSG00000138162 Uniprot:O95359
Length = 2948
Score = 220 (82.5 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 2783 RKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 2842
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 2843 KEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 2901
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 2902 EQAAHQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 2945
Score = 68 (29.0 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAK 165
P + +KQ+LY+ FD +SPV+ P + PT S E E+L N +AK
Sbjct: 2536 PQDDDAPKKQALYLMFDTSQESPVKSSPVRMSESPTPCSGSSFEETEALVNTAAK 2590
Score = 56 (24.8 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 94 SEAGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPP--- 150
S P L+ + + TG S S K++ + P LK K ++PP
Sbjct: 2099 SSGNPEAVALAPDAYSTGSS-----SASSTLKRTKKPR-PPSLKKKQTTKKPTETPPVKE 2152
Query: 151 TQSIMEEESLNDSAKLLGTSELNESVNS 178
TQ +EESL S + L + ES +
Sbjct: 2153 TQQEPDEESLVPSGENLASETKTESAKT 2180
Score = 45 (20.9 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 6 QTNPP-TKQLKKKSLPKEP 23
Q NPP TK++ KK + K P
Sbjct: 2280 QENPPPTKKIGKKPVAKMP 2298
Score = 41 (19.5 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 114 CKAPISESELRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEE 158
C P + S P +PV+ P+ PP + I E E
Sbjct: 1936 CPDPAKDLSRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPE 1980
>MGI|MGI:1928899 [details] [associations]
symbol:Tacc2 "transforming, acidic coiled-coil containing
protein 2" species:10090 "Mus musculus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0022027
"interkinetic nuclear migration" evidence=IMP] [GO:0030953 "astral
microtubule organization" evidence=IDA] [GO:0032886 "regulation of
microtubule-based process" evidence=IMP] [GO:0035257 "nuclear
hormone receptor binding" evidence=ISO] MGI:MGI:1928899
GO:GO:0005634 GO:GO:0005737 GO:GO:0021987 GO:GO:0022008
GO:GO:0005815 eggNOG:NOG12793 GO:GO:0030953 InterPro:IPR007707
Pfam:PF05010 GO:GO:0022027 GO:GO:0032886 GO:GO:0035257
PANTHER:PTHR13924 HOGENOM:HOG000294120 CTD:10579 KO:K14282
EMBL:AY177410 EMBL:AB041546 EMBL:AK050985 EMBL:AK165603
EMBL:BC004057 IPI:IPI00116209 IPI:IPI00310822 IPI:IPI00410743
IPI:IPI00816988 RefSeq:NP_067289.2 RefSeq:NP_996738.2
UniGene:Mm.86322 ProteinModelPortal:Q9JJG0 SMR:Q9JJG0 STRING:Q9JJG0
PaxDb:Q9JJG0 PRIDE:Q9JJG0 GeneID:57752 KEGG:mmu:57752
UCSC:uc009kaf.1 UCSC:uc009kag.1 UCSC:uc009kal.1 UCSC:uc009kan.1
HOVERGEN:HBG055954 NextBio:313904 Genevestigator:Q9JJG0
GermOnline:ENSMUSG00000030852 Uniprot:Q9JJG0
Length = 1149
Score = 211 (79.3 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 48/164 (29%), Positives = 88/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + + L + E + D+ +YE+
Sbjct: 985 RKIVAEYEKTIAQMIPGTERKILSHQTVQQLVLEKEQALA-DLNSVEKSLADLFRRYEKM 1043
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 1044 KEVLEGFRKNEEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 1102
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 1103 EQAAYQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 1146
Score = 61 (26.5 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAKL 166
P + +KQ+LY+ FD +SPV+ P + PT S + E+L N + KL
Sbjct: 738 PQDDDTPKKQALYLMFDTPQESPVKSPPVRMSDSPTPCSGSSFEDTEALVNAATKL 793
Score = 45 (20.9 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 6 QTN-PPTKQLKKKSLPKEP 23
Q N PPTK++ KK + K P
Sbjct: 473 QENAPPTKKIGKKPVAKMP 491
Score = 43 (20.2 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 96 AGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFD-PFLKSPVRQKPSIKSPPTQSI 154
+ P+ A E TG ++++E R F+ P +PV+ P+ PP +
Sbjct: 111 SAPSAAGPGVEVTPTGSP--QHLAKNEPRSSDSEEAFETPESTTPVKAPPAPPPPPPEVT 168
Query: 155 MEEESLNDSA 164
E E ++ A
Sbjct: 169 PEPEVIDPPA 178
Score = 37 (18.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 182 KENESLNGNCATSTPSGT 199
K+ L G+CA S P GT
Sbjct: 33 KQQGDLPGSCAGSIP-GT 49
>UNIPROTKB|I3LM30 [details] [associations]
symbol:TACC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0032886 "regulation of microtubule-based process"
evidence=IEA] [GO:0030953 "astral microtubule organization"
evidence=IEA] [GO:0022027 "interkinetic nuclear migration"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
GO:GO:0005794 GO:GO:0021987 GO:GO:0005730 GO:GO:0022008
GO:GO:0030953 InterPro:IPR007707 Pfam:PF05010 GO:GO:0022027
GO:GO:0032886 PANTHER:PTHR13924 GeneTree:ENSGT00530000063855
OMA:ECKVSTR EMBL:CU367846 Ensembl:ENSSSCT00000029273 Uniprot:I3LM30
Length = 2855
Score = 216 (81.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 48/164 (29%), Positives = 87/164 (53%)
Query: 232 QKMLNDYENTITQCVNQRXXXXXXXXXXXXXXXXXXXXVQLHLRNSEIAFNDVHLKYERS 291
+K++ +YE TI Q + L + E + D+ +YE+
Sbjct: 2691 RKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKM 2750
Query: 292 KVIIEGMKANEDHLRARHSELEEELKKQVNKYDALKTHAISQLEKANQDL-DLRNKTYEM 350
K ++EG + NE+ L+ E +KK+ +Y ALK HA +L++AN ++ +R K +
Sbjct: 2751 KEVLEGFRKNEEVLKKCAQEYSR-VKKEEQRYQALKVHAEEKLDRANAEIAQVRGKA-QQ 2808
Query: 351 ETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKL 394
E +A L+K ++++ +L+ +L +K +E ELT ICD+LI+K+
Sbjct: 2809 EQAAYQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKM 2852
Score = 67 (28.6 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 117 PISESELRKQSLYVQFDPFLKSPVRQKP-SIKSPPT----QSIMEEESL-NDSAKL 166
P ++ +KQ+LY+ FD +SPV+ P + PT S E E+L N AK+
Sbjct: 2444 PQDDAAPKKQALYLMFDTSEESPVKSPPVRMSESPTPCSGSSFEETEALVNAGAKI 2499
Score = 52 (23.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 45/184 (24%), Positives = 70/184 (38%)
Query: 6 QTNPP-TKQLKKKSLPKEPFN-PHNDSLGEFELAESQLIXXXXXXXXXXXXXXXXAEDTK 63
Q NPP TK++ KK + K P P E +L + +++
Sbjct: 2210 QENPPPTKKIGKKPVAKMPLRRPKMKKTPE-KLDNTPASPTRSPADPNPFSSTSKMQESP 2268
Query: 64 EVVNLSGHSDRDLLENEI-PVNLMED--ENLNKSEAG---PNTA-ELSKEDFQTGDECKA 116
++ S D D ++ I P + +KS A P +A E S D GD
Sbjct: 2269 KLAQHSYSFDPDACDDSIDPFQACSKTPSSPSKSPASFEIPASAVEASGAD---GDGLNK 2325
Query: 117 PISESE--LRKQSLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNE 174
P + + L+ + V+ P +SP+ PS PT + E SA + T E
Sbjct: 2326 PAKKKKTPLKTDTFRVKKSP-KRSPLSDPPS--QDPTPAATPETPPVISAVVHATDEEKL 2382
Query: 175 SVNS 178
+V S
Sbjct: 2383 AVTS 2386
Score = 39 (18.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 134 PFLKSPVRQKPSIKSPPTQSIMEEE 158
P +PV+ P+ PP + + E E
Sbjct: 1886 PESTTPVKAPPAPPPPPPEVVPEPE 1910
>DICTYBASE|DDB_G0275391 [details] [associations]
symbol:tacc "transforming acidic
coiled-coil-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0005813 "centrosome" evidence=IDA;TAS]
dictyBase:DDB_G0275391 GO:GO:0005813 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 eggNOG:NOG12793 RefSeq:XP_643708.1
EnsemblProtists:DDB0220500 GeneID:8619979 KEGG:ddi:DDB_G0275391
InParanoid:Q553N8 OMA:YERQAQI Uniprot:Q553N8
Length = 1478
Score = 117 (46.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/108 (28%), Positives = 60/108 (55%)
Query: 291 SKVIIEGMKANEDHLRARHSELEEELKKQ--VNKYDALKTHAISQLEKANQDLDLRNKTY 348
S+ +++ + + + + S L+ + Q V+K++ALK HA ++L+ A++ L +
Sbjct: 1375 SEALLDNEQLRKQIIDLKESNLQANKENQIHVSKFNALKAHAEAKLDSASEQLTKLKEVA 1434
Query: 349 EMETTKLKAMLKKSEMQITSLQESLARKTEENAELTSICDDLISKLSS 396
+ E L L +SE ++ S++E +EN EL +CD+LI KL +
Sbjct: 1435 KKEIEVLTIKLNRSESKV-SIKE------KENDELVKLCDELIFKLQT 1475
Score = 59 (25.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/122 (20%), Positives = 51/122 (41%)
Query: 67 NLSGHSDRDLLENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISESELRKQ 126
N+ ++ + E ++E +N K A T E +++ ++ K + EL +Q
Sbjct: 903 NIDYEAEEKKSQEESRKRMLERQNKAKGAAKQKTPEDEEKERIKLEKQKERDQQRELMRQ 962
Query: 127 SLYVQFDPFLKSPVRQKPSIKSPPTQSIMEEESLNDSAKLLGTSELNESVNSLSIKENES 186
++ + +SPV++ S +Q EEES +D S + + + N +
Sbjct: 963 AMSGVSNG--ESPVKKDKQSSSSSSQKPSEEESKSDQPTTKSKSPSPQPTENNNNNNNNN 1020
Query: 187 LN 188
N
Sbjct: 1021 SN 1022
Score = 52 (23.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 29/149 (19%), Positives = 55/149 (36%)
Query: 4 KYQTNPPTKQLKKKSLPKEPFNPHN-DSLGEFELAESQLIXXXXXXXXXXXXXXXXAEDT 62
K + PP +Q ++ + + N + + L + Q AE
Sbjct: 222 KSPSPPPPQQQAEEPISQPTLNDDEYERQAQIALQQQQEKQRQMELEIQREYERLAAEGQ 281
Query: 63 KEVVNLSGHSDRDLLENEIPVNLMEDENLNKSEAGPNTAELSKEDFQTGDECKAPISESE 122
N+ +++ E E +E +N +K A T E +++ ++ K + E
Sbjct: 282 GVEENIDYEAEQRKREEESRKRFLERQNKSKGAAKQKTPEDEEKERIKLEKQKERDQQRE 341
Query: 123 LRKQSLYVQFDPFLKSPVRQ-KPSIKSPP 150
L KQ++ P +S + KPS P
Sbjct: 342 LMKQAMSGSGTPTKESKQEESKPSQNDQP 370
Score = 51 (23.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 91 LNKSEAGPNTAELSKEDFQTGDECKAPISESELRKQSLYVQFDPFLKSPVRQK---PSIK 147
L K + EL K+ +G+ + +QS P +SP QK P +
Sbjct: 487 LEKQKERDQQRELMKQAMGSGNNTPKKEEPKPIEEQSKPPTSQPKSQSPPPQKVEEPISQ 546
Query: 148 SPPTQSIMEEES 159
+PPT E ++
Sbjct: 547 APPTDEEYERQA 558
>ZFIN|ZDB-GENE-030131-2964 [details] [associations]
symbol:tpm4b "tropomyosin 4b" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] ZFIN:ZDB-GENE-030131-2964
InterPro:IPR000533 Pfam:PF00261 PRINTS:PR00194 HSSP:P42639
HOVERGEN:HBG107404 GeneTree:ENSGT00550000074494
HOGENOM:HOG000231522 KO:K10375 eggNOG:NOG249432 EMBL:CU693492
EMBL:CU693474 EMBL:BC055225 IPI:IPI00487267 RefSeq:NP_955969.1
UniGene:Dr.76950 SMR:Q7SXW1 STRING:Q7SXW1
Ensembl:ENSDART00000097874 GeneID:324244 KEGG:dre:324244 CTD:324244
OMA:ARGMELE OrthoDB:EOG4K3KXP NextBio:20808674 Uniprot:Q7SXW1
Length = 248
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 40/139 (28%), Positives = 67/139 (48%)
Query: 271 QLHLRNSEIAFNDVHLKYE---RSKVIIEGM--KANE--DHLRARHSELEEELKKQVNKY 323
++ L+ ++ D KYE R VI+EG +A E + + +LEEELK N
Sbjct: 109 EIQLKEAKHIAEDSDRKYEEVARKLVILEGELERAEERAEIAELKGGDLEEELKNVTNNL 168
Query: 324 DALKTHAISQLEKANQDLD----LRNKTYEMETTK--LKAMLKKSEMQITSLQESLARKT 377
+L+ + EK ++ D L +K E+ET + + K E I L+ESL
Sbjct: 169 KSLEAQSEKYSEKEDKYEDEIKVLTDKLKEVETRAEFAERTVAKLEKTIDDLEESLGEAK 228
Query: 378 EENAELTSICDDLISKLSS 396
++N E+ + D + +L+S
Sbjct: 229 QQNLEMHQVLDQTLQELNS 247
>MGI|MGI:2449202 [details] [associations]
symbol:Tpm4 "tropomyosin 4" species:10090 "Mus musculus"
[GO:0001725 "stress fiber" evidence=ISO] [GO:0002102 "podosome"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030863
"cortical cytoskeleton" evidence=IDA] [GO:0031941 "filamentous
actin" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
MGI:MGI:2449202 GO:GO:0006979 GO:GO:0046872 GO:GO:0030863
GO:GO:0001725 GO:GO:0002102 InterPro:IPR000533 Pfam:PF00261
PRINTS:PR00194 PROSITE:PS00326 eggNOG:NOG304012 HOVERGEN:HBG107404
OrthoDB:EOG4TXBSM GeneTree:ENSGT00550000074494 HOGENOM:HOG000231522
CTD:7171 KO:K10375 OMA:EKCKQVE EMBL:BC023701 EMBL:BC023827
EMBL:BC070421 IPI:IPI00421223 RefSeq:NP_001001491.1
UniGene:Mm.295124 ProteinModelPortal:Q6IRU2 SMR:Q6IRU2
IntAct:Q6IRU2 STRING:Q6IRU2 PhosphoSite:Q6IRU2 PaxDb:Q6IRU2
PRIDE:Q6IRU2 Ensembl:ENSMUST00000003575 GeneID:326618
KEGG:mmu:326618 UCSC:uc009mfi.1 InParanoid:Q6IRU2 NextBio:397902
Bgee:Q6IRU2 CleanEx:MM_TPM4 Genevestigator:Q6IRU2
GermOnline:ENSMUSG00000031799 Uniprot:Q6IRU2
Length = 248
Score = 111 (44.1 bits), Expect = 0.00075, P = 0.00075
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 270 VQLHLRNSEIAFNDVHLKYE---RSKVIIEG-MKANEDHLRARH---SELEEELKKQVNK 322
+++ L+ ++ ++ KYE R VI+EG +K E+ +LEEELK N
Sbjct: 108 LEMQLKEAKHITDEADRKYEEVARKLVILEGELKRAEERAEVSELKCGDLEEELKNVTNN 167
Query: 323 YDALK--THAISQLE-KANQDLDL-RNKTYEMETTK--LKAMLKKSEMQITSLQESLARK 376
+L+ + S+ E K +++ L +K E ET + + K E I L+E LA+
Sbjct: 168 LKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVSKLEKTIDDLEEKLAQA 227
Query: 377 TEENAELTSICDDLISKLSSCV 398
EEN L D +++L+ C+
Sbjct: 228 KEENVGLHQTLDQTLNELN-CI 248
>RGD|3899 [details] [associations]
symbol:Tpm4 "tropomyosin 4" species:10116 "Rattus norvegicus"
[GO:0001725 "stress fiber" evidence=IEA;ISO] [GO:0002102 "podosome"
evidence=IEA;ISO] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006936 "muscle
contraction" evidence=TAS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0030863 "cortical cytoskeleton"
evidence=IEA;ISO] [GO:0031941 "filamentous actin" evidence=IEA;ISO]
[GO:0046872 "metal ion binding" evidence=IEA] RGD:3899 GO:GO:0006979
GO:GO:0046872 GO:GO:0030863 GO:GO:0006936 GO:GO:0031941 GO:GO:0001725
GO:GO:0002102 InterPro:IPR000533 Pfam:PF00261 PRINTS:PR00194
PROSITE:PS00326 HOVERGEN:HBG107404 OrthoDB:EOG4TXBSM
GeneTree:ENSGT00550000074494 HOGENOM:HOG000231522 CTD:7171 KO:K10375
OMA:EKCKQVE eggNOG:NOG249432 EMBL:J02780 EMBL:Y00169 IPI:IPI00214905
PIR:S10623 RefSeq:NP_036810.1 UniGene:Rn.108199
ProteinModelPortal:P09495 SMR:P09495 STRING:P09495 PRIDE:P09495
Ensembl:ENSRNOT00000021073 GeneID:24852 KEGG:rno:24852 UCSC:RGD:3899
InParanoid:P09495 NextBio:604640 Genevestigator:P09495
GermOnline:ENSRNOG00000015496 Uniprot:P09495
Length = 248
Score = 111 (44.1 bits), Expect = 0.00075, P = 0.00075
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 271 QLHLRNSEIAFNDVHLKYE---RSKVIIEG-MKANEDHLRA---RHSELEEELKKQVNKY 323
++ L+ ++ + KYE R VI+EG ++ E+ + S+LEEELK N
Sbjct: 109 EMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKSSDLEEELKNVTNNL 168
Query: 324 DALK--THAISQLE-KANQDLDL-RNKTYEMETTK--LKAMLKKSEMQITSLQESLARKT 377
+L+ + S+ E K +++ L +K E ET + + K E I L+E LA+
Sbjct: 169 KSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVSKLEKTIDDLEEKLAQAK 228
Query: 378 EENAELTSICDDLISKLSSCV 398
EEN L D +++L+ C+
Sbjct: 229 EENVGLHQTLDQTLNELN-CI 248
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.306 0.123 0.327 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 402 353 0.00079 117 3 11 23 0.39 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 572 (61 KB)
Total size of DFA: 202 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.74u 0.13s 38.87t Elapsed: 00:00:07
Total cpu time: 38.75u 0.13s 38.88t Elapsed: 00:00:07
Start: Thu Aug 15 16:37:07 2013 End: Thu Aug 15 16:37:14 2013