RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13762
(190 letters)
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 87.9 bits (217), Expect = 1e-21
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 42 KILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
++CYY+ +Y REG GK+ +L AL C+HLVY YAG+ + S+++ LD K+
Sbjct: 2 NLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKH 61
Query: 102 KGHELYKQVTALKTSYPDLNIILGVGGFED 131
+ +VT+LK YP L ++L VGG D
Sbjct: 62 ----QFSEVTSLKRKYPHLKVLLSVGGDHD 87
Score = 60.6 bits (146), Expect = 6e-12
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 122 IILGVGGFEDQKDKEKYLDLVIHTVGVKAAYAKQNGLAGVAMVDLSLDDFKGNC-GEKYV 180
I LGV +D + KAAYA+ L GVA+ DLS DDF+G C G+KY
Sbjct: 271 INLGVA-TDDPD-----------SASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYP 318
Query: 181 LVKSAKHHL 189
++++ K+ L
Sbjct: 319 ILRAIKYRL 327
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein
(SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 292
Score = 67.5 bits (164), Expect = 2e-14
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 42 KILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
K++CYY + REG G + + P L CTH++Y +A ISN+ E+DT +
Sbjct: 2 KLICYYTSWSQYREGDGSCFPDAIDPFL--CTHVIYTFANISNN---------EIDTWEW 50
Query: 102 KGHELYKQVTALKTSYPDLNIILGVGGFEDQKDKEKYLDLVIHTVGVKA------AYAKQ 155
LY + LK P L +L VG E++ + T + + +
Sbjct: 51 NDVTLYDTLNTLKNRNPKLKTLLSVG--GWNFGPERFSKIASKTQSRRTFIKSVPPFLRT 108
Query: 156 NGLAGV 161
+G G+
Sbjct: 109 HGFDGL 114
Score = 55.2 bits (132), Expect = 4e-10
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 122 IILGVGGFEDQKDKEKYLDLVIHTVGVKAAYAKQNGLAGVAMVDLSLDDFKGNC---GEK 178
+++G+ +DQ+ +V KA Y K LAG + L LDDF+G
Sbjct: 232 LVMGIP-TDDQE-----------SVKNKARYLKNRQLAGAMVWALDLDDFRGTFCGQNLT 279
Query: 179 YVLVKSAKHHL 189
+ L + K L
Sbjct: 280 FPLTSAVKDVL 290
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 297
Score = 62.9 bits (152), Expect = 9e-13
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 42 KILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
K++CY+ + A R+G+ + ++L P+L CTHL+YA+AG++N + E
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSL--CTHLIYAFAGMTNHQLSTTEWNDE------ 53
Query: 102 KGHELYKQVTALKTSYPDLNIILGVG 127
LY++ LK P L +L +G
Sbjct: 54 ---TLYQEFNGLKKMNPKLKTLLAIG 76
Score = 51.7 bits (123), Expect = 8e-09
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
Query: 122 IILGVGGFEDQKDKEKYLDLVIHTVGVKAAYAKQNGLAGVAMVDLSLDDFKG-NCGE-KY 179
+ILG+ +D + + K +Y KQ GL G + L LDDF G +C + +Y
Sbjct: 239 LILGMP-TDDVE-----------SFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRY 286
Query: 180 VLVKSAKHHL 189
L+++ + L
Sbjct: 287 PLIQTLRQEL 296
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 356
Score = 61.3 bits (148), Expect = 4e-12
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 12/102 (11%)
Query: 41 KKILCYYNHEAYK-------REGKGKVATEELRPALTT-CTHLVYAYAGISNSDYHIKSL 92
K ++ YY + + PA TH+ +++ I+++
Sbjct: 3 KAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSN----LEC 58
Query: 93 DKELDTDKNKGHELYKQVTALKTSYPDLNIILGVGGFEDQKD 134
+ T+ K ++ ++TALK P L I+ +GG+ D
Sbjct: 59 AWDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSND 100
Score = 42.1 bits (98), Expect = 2e-05
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 12/57 (21%)
Query: 118 PDLNIILGVGGFEDQKDKEKYLDLVIHTVGVKAAYAKQNGLAGVAMVDLSLDDFKGN 174
P I++GV F+D + + KA Y KQ L GV L D+ G+
Sbjct: 279 PSAKIVMGVP-FDDAE-----------SFKYKAKYIKQQQLGGVMFWHLGQDNRNGD 323
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1,
saccharide binding domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 302
Score = 60.2 bits (145), Expect = 8e-12
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 42 KILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
+++CYY A R +G + P L CTHL+YA+AG+ N+ E+
Sbjct: 2 QLMCYYTSWAKDRPIEGSFKPGNIDPCL--CTHLIYAFAGMQNN---------EITYTHE 50
Query: 102 KGHELYKQVTALKTSYPDLNIILGVGGF 129
+ Y+ + LK +L +L +GG+
Sbjct: 51 QDLRDYEALNGLKDKNTELKTLLAIGGW 78
Score = 49.0 bits (116), Expect = 6e-08
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 145 TVGVKAAYAKQNGLAGVAMVDLSLDDFKGN-CGE-KYVLVKSAKHHL 189
+ +KA + K N L G + L +DDF G+ C + + L + K L
Sbjct: 250 SFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDL 296
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus
fumigatus [TaxId: 5085]}
Length = 333
Score = 53.6 bits (128), Expect = 2e-09
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 41 KKILCYY-NHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTD 99
+ + Y+ N Y R ++L TH++YA+A + + D D +
Sbjct: 5 YRSVVYFVNWAIYGR----NHNPQDLPVER--LTHVLYAFANVRPETGEVYMTDSWADIE 58
Query: 100 K-----------NKGHELYKQVTALKTSYPDLNIILGVGGFED 131
K N + KQ+ LK +L ++L +GG+
Sbjct: 59 KHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWTY 101
Score = 31.3 bits (70), Expect = 0.051
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 145 TVGVKAAYAKQNGLAGVAMVDLSLDDF 171
+K+ Y K GL G D S D
Sbjct: 265 VANLKSGYIKSLGLGGAMWWDSSSDKT 291
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus
(Coccidioides immitis) [TaxId: 5501]}
Length = 330
Score = 53.3 bits (127), Expect = 2e-09
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 17/109 (15%)
Query: 41 KKILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDK 100
+ + Y+ + A G ++L+ TH++YA+A I + D DTDK
Sbjct: 3 FRSVVYFVNWAIYGRG---HNPQDLKADQ--FTHILYAFANI-RPSGEVYLSDTWADTDK 56
Query: 101 -----------NKGHELYKQVTALKTSYPDLNIILGVGGFEDQKDKEKY 138
N + KQ+ LK + +L +L +GG+ + +
Sbjct: 57 HYPGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTP 105
Score = 27.9 bits (61), Expect = 0.82
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 145 TVGVKAAYAKQNGLAGVAMVDLSLDDFKGN 174
G KA Y +NG+ G + S D
Sbjct: 262 IAGKKAEYITKNGMGGGMWWESSSDKTGNE 291
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B
{Arthrobacter sp., tad20 [TaxId: 1667]}
Length = 374
Score = 49.5 bits (117), Expect = 4e-08
Identities = 21/127 (16%), Positives = 37/127 (29%), Gaps = 34/127 (26%)
Query: 34 LEDNPPPKKILCYY-NHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHI--- 89
L + + Y+ Y R + K TH+ Y++ I+N
Sbjct: 2 LTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKN--LTHINYSFGNINNQTLTCFMA 59
Query: 90 ----------------------------KSLDKELDTDKNKGHELYKQVTALKTSYPDLN 121
KS+ + DT + Q+ LK P L
Sbjct: 60 NKAQGTGPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLK 119
Query: 122 IILGVGG 128
+++ +GG
Sbjct: 120 VMISLGG 126
Score = 33.7 bits (76), Expect = 0.009
Identities = 9/26 (34%), Positives = 10/26 (38%)
Query: 145 TVGVKAAYAKQNGLAGVAMVDLSLDD 170
T K Y GL G +LS D
Sbjct: 323 TTKQKTDYIVSKGLGGGMWWELSGDR 348
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus
circulans [TaxId: 1397]}
Length = 347
Score = 45.6 bits (107), Expect = 9e-07
Identities = 28/130 (21%), Positives = 41/130 (31%), Gaps = 44/130 (33%)
Query: 40 PKKILCYY-NHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISN-------------- 84
KI+ YY + AY R ++ P TH+ YA+A I
Sbjct: 11 SYKIVGYYPSWAAYGR----NYNVADIDPTK--VTHINYAFADICWNGIHGNPDPSGPNP 64
Query: 85 ---------------SDYHIKSLDKELDTDKN--------KGHELYKQVTALKTSYPDLN 121
+ I D +DT K Q+ LK + P+L
Sbjct: 65 VTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLK 124
Query: 122 IILGVGGFED 131
I+ VGG+
Sbjct: 125 TIISVGGWTW 134
Score = 37.5 bits (86), Expect = 5e-04
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 12/49 (24%)
Query: 122 IILGVGGFEDQKDKEKYLDLVIHTVGVKAAYAKQNGLAGVAMVDLSLDD 170
++LGV F+D + +VG K AY K GL G +LS D
Sbjct: 299 LVLGVP-FDDAE-----------SVGYKTAYIKSKGLGGAMFWELSGDR 335
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 358
Score = 44.8 bits (105), Expect = 2e-06
Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 47/145 (32%)
Query: 25 SKVKYIPINLEDNPPP------KKILCYY-NHEAYKREGKGKVATEELRPALTTCTHLVY 77
S + + L + P K + Y+ Y R +++ THL+Y
Sbjct: 4 SHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGR----NFTVDKIPAQN--LTHLLY 57
Query: 78 AYAGISN-------------------------SDYHIKSLDKELDTDK---------NKG 103
+ I D+ + D K +
Sbjct: 58 GFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPY 117
Query: 104 HELYKQVTALKTSYPDLNIILGVGG 128
+ Q+ ALK ++PDL I+ +GG
Sbjct: 118 KGNFGQLMALKQAHPDLKILPSIGG 142
Score = 28.6 bits (63), Expect = 0.43
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 144 HTVGVKAAYAKQNGLAGVAMVDLSLDD 170
+V K Y L G+ ++ D+
Sbjct: 314 RSVQAKGKYVLDKQLGGLFSWEIDADN 340
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis,
Narbonin [TaxId: 3912]}
Length = 289
Score = 42.4 bits (99), Expect = 1e-05
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Query: 40 PKKILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTD 99
PK I Y TE + T H + +A S + + E D
Sbjct: 1 PKPIFREYIGVKPNSTTLHDFPTEII-NTETLEFHYILGFAIESYYESGKGTGTFEESWD 59
Query: 100 KNKGHELYKQVTALKTSYPDLNIILGVGGFEDQ 132
++V LK +P++ +++ +GG
Sbjct: 60 VELFG--PEKVKNLKRRHPEVKVVISIGGRGVN 90
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Flavobacterium meningosepticum, endoglycosidase F1
[TaxId: 238]}
Length = 285
Score = 39.0 bits (90), Expect = 1e-04
Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 4/88 (4%)
Query: 41 KKILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDK 100
K+ + + L +V A I+ + K +
Sbjct: 6 IKLFSFTEVNDTNPLNNLNFTLKNSGKPL--VDMVVLFSANINYDAANDKVFVSNNPNVQ 63
Query: 101 NKGHELYKQVTALKTSYPDLNIILGVGG 128
+ K + L+ + +IL + G
Sbjct: 64 HLLTNRAKYLKPLQ--DKGIKVILSILG 89
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Streptomyces plicatus, endoglycosidase H [TaxId: 1922]}
Length = 265
Score = 36.2 bits (83), Expect = 0.001
Identities = 19/143 (13%), Positives = 35/143 (24%), Gaps = 20/143 (13%)
Query: 42 KILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
+ Y GK + V A I+ + + +
Sbjct: 5 TSVAYVEVNNNSMLNVGKYTLADGGGNA--FDVAVIFAANINYDTGTKTAYLHFNENVQR 62
Query: 102 KGHELYKQVTALKTSYPDLNIILGVGG---------FEDQKDKEKYLDLVIHTVGVKAAY 152
Q+ L+ + ++L V G F Q+ + + V
Sbjct: 63 VLDNAVTQIRPLQ--QQGIKVLLSVLGNHQGAGFANFPSQQAASAFAKQLSDAV------ 114
Query: 153 AKQNGLAGVAMVDLSLDDFKGNC 175
+ GL GV D +
Sbjct: 115 -AKYGLDGVDFDDEYAEYGNNGT 136
>d1a8ya3 c.47.1.3 (A:229-347) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 119
Score = 27.1 bits (60), Expect = 0.78
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 85 SDYHIKSLDKELDTDKNKGHELYKQVTALKTSYPDLNIIL 124
HI + +E D D + E+ K V T PDL+II
Sbjct: 19 DGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIW 58
>d1unld_ a.74.1.1 (D:) CDK5 activator 1 (NCK5a, p25) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 150
Score = 27.1 bits (60), Expect = 0.98
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 58 GKVATE-ELRPALTTCTHLVYAYAG 81
+V ++ EL+ L TC +L Y+Y G
Sbjct: 70 SEVGSDHELQAVLLTCLYLSYSYMG 94
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 26.4 bits (58), Expect = 1.1
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 54 REGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
+ G + EEL+ L + G +D K+ K D D +
Sbjct: 52 ADASGFIEEEELKFVLKSFAAD-----GRDLTDAETKAFLKAADKDGD 94
>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal
domain (domain IV) {Rat (Rattus norvegicus), M-type
[TaxId: 10116]}
Length = 186
Score = 26.7 bits (58), Expect = 1.6
Identities = 8/46 (17%), Positives = 14/46 (30%)
Query: 56 GKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
+++ EL+ L S K + LD D +
Sbjct: 30 EDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGS 75
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 25.3 bits (55), Expect = 1.6
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 8/52 (15%)
Query: 50 EAYKREGKGKVATEELRPALTTCTHLVYAYAGISNSDYHIKSLDKELDTDKN 101
E + + GK++ +E R + + I +E+D D N
Sbjct: 8 EKFDKNKDGKLSLDEFREVALAFSP--------YFTQEDIVKFFEEIDVDGN 51
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas
amyloderamosa [TaxId: 32043]}
Length = 475
Score = 26.6 bits (57), Expect = 2.1
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 84 NSDYHIKSLDKELDTDKNKGHELYKQVTALKTSYPDL 120
N D L TD++ + +++ A + ++P L
Sbjct: 434 NLDSSANWLTYSWTTDQSNFYTFAQRLIAFRKAHPAL 470
>d1vhka2 c.116.1.5 (A:74-253) Hypothetical protein YqeU {Bacillus
subtilis [TaxId: 1423]}
Length = 180
Score = 24.7 bits (53), Expect = 6.4
Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 11/111 (9%)
Query: 22 ATKSKVKYIPINLEDNPPPKKILCYYNHEAYKREGKGKVATEELRPALTTCTHLVYAYAG 81
A +S VK + ++ EA + + P +
Sbjct: 40 AARSVVKLDDKKAKKK---RERWTKIAKEA------AEQSYRNEVPRVMDVHSFQQLLQ- 89
Query: 82 ISNSDYHIKSLDKELDTDKNKGHELYKQVTALKTSYPDLNIILGVGGFEDQ 132
D+ + E + + + V++L L + GG +
Sbjct: 90 -RMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKGSSLLIVFGPEGGLTEA 139
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.394
Gapped
Lambda K H
0.267 0.0493 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 690,158
Number of extensions: 31261
Number of successful extensions: 103
Number of sequences better than 10.0: 1
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 36
Length of query: 190
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 110
Effective length of database: 1,309,196
Effective search space: 144011560
Effective search space used: 144011560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.6 bits)