BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13766
(165 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 4/113 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDE----RISFE 99
++E+ EAF+LFD GD KI SQ G+V+RALGQNPT +V K KSDE R+ FE
Sbjct: 9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFE 68
Query: 100 VFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP+ QA++K R T +D++EG R FDK+GNG + AELRH+LTTLG M+
Sbjct: 69 TFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT 121
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 17 LKNSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQ 76
LK+ ++ F + M N+ + ++YLE F++FD G+ K+ +++ +VL LG+
Sbjct: 60 LKSRRVDF-ETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE 118
Query: 77 NPTECDVKKYSQQHK-SDERISFEVFL 102
TE +V+ H+ S+ I++E FL
Sbjct: 119 KMTEEEVETVLAGHEDSNGCINYEAFL 145
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDE----RISFEVF 101
E+ EAFQLFD GD KI SQ G+V+RALGQNPT +V K KSDE + FE F
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 67
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
LP+ Q I+K + +D++EGLR FDK+GNG + AE+RH+L TLG M+
Sbjct: 68 LPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 118
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
L+F Q L M NK ++Y+E ++FD G+ + ++I +VL LG+ TE
Sbjct: 62 LKFEQFLPMMQTIAK-NKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 82 DVKKYSQQHK-SDERISFE 99
+V++ H+ S+ I++E
Sbjct: 121 EVEQLVAGHEDSNGCINYE 139
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY----SQQHKSDERISFE 99
I+++ EAF LFD GD KI +SQ+G+++RALGQNPT ++ K S++ + ++I+FE
Sbjct: 3 INDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFE 62
Query: 100 VFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP+ QA + + T +DF+EGLR FDK+GNG + AELRH+L TLG M+
Sbjct: 63 EFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 115
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 21 KLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTE 80
K+ F + L M NK + ++++E ++FD G+ + +++ +VL LG+ TE
Sbjct: 58 KITFEEFL-PMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 116
Query: 81 CDVKKYSQ-QHKSDERISFEVFL 102
+V++ + Q S+ I++E F+
Sbjct: 117 EEVEELMKGQEDSNGCINYEAFV 139
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDE----RISFEVF 101
E+ EAFQLFD GD KI SQ G+V+RALGQNPT +V K KSDE + FE F
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
LP+ Q I+K + +D++EGLR FDK+GNG + AE+RH+L TLG M+
Sbjct: 70 LPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMT 120
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
L+F Q L M NK ++Y+E ++FD G+ + ++I +VL LG+ TE
Sbjct: 64 LKFEQFLPMMQTIAK-NKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 82 DVKKYSQQHK-SDERISFE 99
+V++ H+ S+ I++E
Sbjct: 123 EVEQLVAGHEDSNGCINYE 141
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 4/115 (3%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY----SQQHKSDERIS 97
+ D++ EAF LFD GD KI SQ+G++ RALGQNPT ++ K S++ + I+
Sbjct: 3 AAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAIT 62
Query: 98 FEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FE FLP+ QA + + T +DF+EGLR FDK+GNG + AELRH+L TLG M+
Sbjct: 63 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 117
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 38 NKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQ-QHKSDERI 96
NK + ++++E ++FD G+ + +++ +VL LG+ TE +V++ + Q S+ I
Sbjct: 76 NKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCI 135
Query: 97 SFEVFL 102
++E F+
Sbjct: 136 NYEAFV 141
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 76/115 (66%), Gaps = 4/115 (3%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY----SQQHKSDERIS 97
+ D++ EAF LFD GD KI SQ+G++ RALGQNPT ++ K S++ + I+
Sbjct: 5 AAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAIT 64
Query: 98 FEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FE FLP+ QA + + T +DF+EGLR FDK+GNG + AELRH+L TLG M+
Sbjct: 65 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 119
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 38 NKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQ-QHKSDERI 96
NK + ++++E ++FD G+ + +++ +VL LG+ TE +V++ + Q S+ I
Sbjct: 78 NKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCI 137
Query: 97 SFEVFL 102
++E F+
Sbjct: 138 NYEAFV 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 30 KMYGYEPVNKVMTS--IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYS 87
K G+EP +T I E+ EAF LFD GD I ++G V+R+LGQNPTE +++
Sbjct: 285 KTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 344
Query: 88 QQ--HKSDERISFEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLT 145
+ D I F FL + K + D+ ++ E R FDKDGNG+IS+AELRH++T
Sbjct: 345 NEVDADGDGTIDFPEFLIMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 402
Query: 146 TLG 148
LG
Sbjct: 403 NLG 405
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 432
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 433 FVQMMTA 439
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 101 FLPI 104
F+ +
Sbjct: 142 FVTM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPI 104
F+ +
Sbjct: 142 FVTM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 114
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPI 104
F+ +
Sbjct: 142 FVTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 113
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPI 104
F+ +
Sbjct: 141 FVTM 144
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 113
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVTMMTA 147
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 66 LNLM--ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG 110
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 138 FVQVMMA 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 69 LNLM--ARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG 113
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQVMMA 147
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 70 LTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG ++
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLT 118
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG ++
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLT 117
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQMMTA 147
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 67 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 111
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 139 FVQMMTA 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 13 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 72
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 73 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 117
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 145 FVQMMTA 151
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ + E R FDKDGNGFIS+AELRH++T LG
Sbjct: 69 LNLM--ARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG 113
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 49 EAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFLPIYQ 106
EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E F+ +
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMM 146
Query: 107 A 107
A
Sbjct: 147 A 147
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 113
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHK--SDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQMMTA 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 11 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 70
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 71 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 115
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 143 FVQMMTA 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 15 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 74
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 75 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 119
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 147 FVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 113
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQMMTA 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 70 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 114
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVQMMTA 148
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 65 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 109
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 137 FVQMMTA 143
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 66 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 110
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 138 FVQMMTA 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 67 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 111
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 101 FLPI 104
F+ +
Sbjct: 139 FVQM 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 67 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 111
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 139 FVQMMTA 145
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 113
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQMMTA 147
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 8 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 67
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 68 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 112
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 101 FLPI 104
F+ +
Sbjct: 140 FVQM 143
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 113
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 141 FVQMMTA 147
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLP 103
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D + + P
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID--FP 66
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ + + D+ ++ E R FDKDGNGFIS+AELRH++T LG
Sbjct: 67 EFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 111
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N + F + L M K+ S +E EAF++FD G+ I +++ +V+ LG+
Sbjct: 60 NGTIDFPEFLTMM-----ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 114
Query: 79 TECDVKKYSQQH--KSDERISFEVFLPI 104
T+ +V + ++ D ++++E F+ +
Sbjct: 115 TDEEVDEMIREADIDGDGQVNYEEFVTM 142
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ IE + FD+DGNG IS+AELRH++T LG
Sbjct: 69 LSLM--ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E +EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D I
Sbjct: 77 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 136
Query: 97 SFEVFL 102
++E F+
Sbjct: 137 NYEEFV 142
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ IE + FD+DGNG IS+AELRH++T LG
Sbjct: 69 LSLM--ARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 113
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E +EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D I
Sbjct: 77 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 136
Query: 97 SFEVFL 102
++E F+
Sbjct: 137 NYEEFV 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 369 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 441 FVQMMTA 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 370
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 371 LTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 443 FVQMMTA 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 370 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 414
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 442 FVQMMTA 448
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 370 LTMM--ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 414
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 442 FVQMMTA 448
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 336 LTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 380
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 408 FVQMMTA 414
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 336 LTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 380
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 408 FVQMMTA 414
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 332
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 333 LTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 377
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 405 FVQMMTA 411
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 370 LTMM--ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 414
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++
Sbjct: 378 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 97 SFEVFLPIYQA 107
++E F+ + A
Sbjct: 438 NYEEFVQMMTA 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 369 LTMM--ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++
Sbjct: 377 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 436
Query: 97 SFEVFLPIYQA 107
++E F+ + A
Sbjct: 437 NYEEFVQMMTA 447
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 370 LTMM--ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 414
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++
Sbjct: 378 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 97 SFEVFLPIYQA 107
++E F+ + A
Sbjct: 438 NYEEFVQMMTA 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 369 LTMM--ARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++
Sbjct: 377 KYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 436
Query: 97 SFEVFLPIYQA 107
++E F+ + A
Sbjct: 437 NYEEFVQMMTA 447
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
+ E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D + F F
Sbjct: 9 VTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L + K + D ++ E R FDKDGNGF+S+AELRH++T LG +S
Sbjct: 69 LGMM--ARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLS 117
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEVFL 102
+E EAF++FD G+ + +++ +V+ LG+ ++ +V + + D ++++E F+
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
Query: 103 PI 104
+
Sbjct: 143 RV 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKD NGFIS+AELRH++T LG
Sbjct: 70 LNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 115 DTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D +F E FDKDG+G I++ EL ++ +LG
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD + I +++ +V+ LG+ T+ +V + ++ D +I++E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVKVMMA 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R FDKD NGFIS+AELRH++T LG
Sbjct: 70 LNLM--ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 113 SADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ D +F E FDKDG+G I++ EL ++ +LG
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLG 41
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD + I +++ +V+ LG+ T+ +V + ++ D +I+++
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 142 FVKVMMA 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 370 LTMMARWMK--DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 414
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 442 FVQMMTA 448
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I Q+G V+R+LGQNPTE +++ + +D I F F
Sbjct: 310 IAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQF 369
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D+ ++ E R F KDGNG+IS+A+LRH++T LG
Sbjct: 370 LTMM--ARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG 414
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N + F Q L M K S +E EAF++F G+ I +Q+ +V+ LG+
Sbjct: 361 NGTIDFPQFLTMM---ARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKL 417
Query: 79 TECDVKKYSQQH--KSDERISFEVFLPIYQA 107
T+ +V + ++ D ++++E F+ + A
Sbjct: 418 TDEEVDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + K + D +++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 65 LTMM--ARKMKDTD-SEEIREAFRVFDKDGNGYISAAELRHVMTNLG 108
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHK--SDERISFE 99
T +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 75 TDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Query: 100 VFLPIYQA 107
F+ + A
Sbjct: 135 EFVQMMTA 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L K + D+ ++ E R FDKDGNG+IS+AELRH+ T LG ++
Sbjct: 69 LT--XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLT 117
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V LG+ T+ +V + ++ D ++
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQV 136
Query: 97 SFEVFLPIYQA 107
++E F+ A
Sbjct: 137 NYEEFVQXXTA 147
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L K + D+ ++ E R FDKDGNG+IS+AELRH+ T LG ++
Sbjct: 70 LT--XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLT 118
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V LG+ T+ +V + ++ D ++
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQV 137
Query: 97 SFEVFLPIYQA 107
++E F+ A
Sbjct: 138 NYEEFVQXXTA 148
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERI-SFEV 100
I+E E F LFD + D + +++G++LR LG NPTE V ++ K E+ E
Sbjct: 8 IEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEE 67
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
LPIY+ +S + AD+F+E + FD++G G ISSAE+R++L LG
Sbjct: 68 ILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 9/53 (16%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTE---------CDVKK 85
T+ DE++EAF+ FD G I ++I NVL+ LG+ TE CD+++
Sbjct: 82 TAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRE 134
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V R+LG NPTE +++ + +D I+F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L K D+ ++ E R FDKDGNG+IS+AELRH+ T LG ++
Sbjct: 69 LTXXARCXK--DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLT 117
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E EAF++FD G+ I +++ +V LG+ T+ +V + ++ D ++
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQV 136
Query: 97 SFEVFLPIYQA 107
++E F+ A
Sbjct: 137 NYEEFVQXXTA 147
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ E F+LFD + D + +IG+V R LG NP DV HK E+ + FE
Sbjct: 9 IDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 68
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+L+ LG +S
Sbjct: 69 FLPAYEGLMDCEQGTYAD-YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 119
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ E F+LFD + D + +IG+V R LG NP DV HK E+ + FE
Sbjct: 8 IDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 67
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+L+ LG +S
Sbjct: 68 FLPAYEGLMDCEQGTYAD-YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 5 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 64
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 65 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 115
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKK 85
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV +
Sbjct: 82 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 121
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 67
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 68 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDV 83
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 122
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 6 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 65
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 66 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 116
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKK 85
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV +
Sbjct: 83 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 122
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 5 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 64
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 65 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 115
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKK 85
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV +
Sbjct: 82 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDE 121
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 67
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 68 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDV 83
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 122
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 44 IDEYLEAFQLF---DNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFE 99
ID+ + F+LF D R D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 8 IDDLKDVFELFAFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFE 66
Query: 100 VFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+LT LG +S
Sbjct: 67 EFLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLTALGERLS 118
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDV 83
+Y+EAF+ FD G I +++ +VL ALG+ ++ DV
Sbjct: 85 DYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 122
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 IDEYLEAFQLFD--NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER-ISFEV 100
ID+ + F+LFD + D + ++G+V R LG NP DV HK E+ + FE
Sbjct: 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEE 67
Query: 101 FLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
FLP Y+ + AD ++E + FD++G GFIS AELRH+L+ LG +S
Sbjct: 68 FLPAYEGLMDCEQGTFAD-YMEAFKTFDREGQGFISGAELRHVLSGLGERLS 118
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
++ EAF LFD GD I V ++ V+R+L QNPTE +++ + +D I F+ FL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ K + D ++ E + FDKD NG+IS++ELRH++ LG
Sbjct: 71 LMA--KKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG 113
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFL 102
+E EAF++FD + I S++ +V+ LG+ T+ +V++ ++ D ++++E F+
Sbjct: 83 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Query: 103 PIYQAI 108
+ +
Sbjct: 143 KMMMTV 148
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEVF 101
I E+ +AF FD G KI ++G ++R LGQNPTE +++ ++ ++ +++F F
Sbjct: 9 IAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
I + R DT ++ E + FD+DG+GFIS AELR ++ LG
Sbjct: 69 CGIM--AKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG 113
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFL 102
+E EAF++FD GD I +++ V+ LG+ T+ ++ + ++ D I++E F+
Sbjct: 83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I E+ EAF LFD + I S++ V+R+LG +P+E +V + D +I F F
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
L + + +S D+ + +E + FDK+G+G IS+AEL+H+LT++G ++ L
Sbjct: 69 LALMS--RQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N +++FS+ L M N S E LEAF++FD GD I +++ +VL ++G+
Sbjct: 60 NHQIEFSEFLALMSRQLKSND---SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 116
Query: 79 TECDVK 84
T+ +++
Sbjct: 117 TDAELE 122
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I E+ EAF LFD + I S++ V+R+LG +P+E +V + D +I F F
Sbjct: 10 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + + +S D+ + +E + FDK+G+G IS+AEL+H+LT++G
Sbjct: 70 LALMS--RQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N +++FS+ L M N S E LEAF++FD GD I +++ +VL ++G+
Sbjct: 61 NHQIEFSEFLALMSRQLKSND---SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117
Query: 79 TECDV 83
T+ +V
Sbjct: 118 TDAEV 122
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I E+ EAF LFD + I S++ V+R+LG +P+E +V + D +I F F
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + + +S D+ + +E + FDK+G+G IS+AEL+H+LT++G
Sbjct: 69 LALMS--RQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N +++FS+ L M N S E LEAF++FD GD I +++ +VL ++G+
Sbjct: 60 NHQIEFSEFLALMSRQLKSND---SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 116
Query: 79 TECDV 83
T+ +V
Sbjct: 117 TDAEV 121
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVF 101
S D+ E FQ+FD D K+ + ++G+ LR+LG+NPT ++ Q + E F
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE-FDLATF 60
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFM--SWVNLVEK 159
+Y+ K + + + ++ R DK+GNG I AELR LL LG+ + S V + K
Sbjct: 61 KTVYRKPIK-TPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Query: 160 EV 161
EV
Sbjct: 120 EV 121
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 23 QFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECD 82
+F FK +P+ E L+AF+ D G+ I +++ +L LG T +
Sbjct: 54 EFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113
Query: 83 VKKYSQQ--HKSDERISFEVFL 102
V++ ++ D I++E F+
Sbjct: 114 VEELMKEVSVSGDGAINYESFV 135
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I E+ EAF LFD I S++ V+R+LG +P+E +V + D I F F
Sbjct: 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEF 69
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + + + D+ + +E + FDK+G+G IS+AEL+H+LT++G
Sbjct: 70 LALMS--RQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 114
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 19 NSKLQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP 78
N ++FS+ L M N S E LEAF++FD GD I +++ +VL ++G+
Sbjct: 61 NHAIEFSEFLALMSRQLKCND---SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117
Query: 79 TECDV 83
T+ +V
Sbjct: 118 TDAEV 122
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 47 YLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIYQ 106
Y +AF LFD G +I + IG++LRA GQNPT ++ + ++ + E FL +
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE--VDMEQFLQVLN 64
Query: 107 AISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
+ ++F++G + FDKD G I ELR++LT+LG +S
Sbjct: 65 RPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLS 110
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
L + + +KG+S + +D R FDK+ +GFI EL +L G ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELEDC---FRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E + F++FD D I + ++G +LRA G++ TE
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 82 DVKKY--SQQHKSDERISFEVFLPIYQAI 108
D++ +D RI F+ FL + + +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
L + + +KG+S ++ + R FDK+ +GFI EL +L G ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKS---EEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E + F++FD D I + ++G +LRA G++ TE
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 82 DVKKY--SQQHKSDERISFEVFLPIYQAI 108
D++ +D RI F+ FL + + +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
L + + +KG+S ++ R FDK+ +GFI EL +L G ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKS---EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E F++FD D I + ++G +LRA G++ TE
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 132
Query: 82 DVKKY--SQQHKSDERISFEVFLPIYQAI 108
D++ +D RI F+ FL + + +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 16 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
L + + +KG+S ++ R FDK+ +GFI EL +L G ++ ++
Sbjct: 76 LVMMVRQMKEDAKGKS---EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 131
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E F++FD D I + ++G +LRA G++ TE
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEE 129
Query: 82 DVKKY--SQQHKSDERISFEVFLPIYQAI 108
D++ +D RI F+ FL + + +
Sbjct: 130 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 158
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
L + + +KG+S ++ R FDK+ +GFI EL +L G
Sbjct: 79 LVMMVRQMKEDAKGKS---EEELANCFRIFDKNADGFIDIEELGEILRATG 126
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E F++FD D I + ++G +LRA G++ E
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEE 132
Query: 82 DVKKY--SQQHKSDERISFEVFLPIYQAI 108
D++ +D RI F+ FL + + +
Sbjct: 133 DIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
E EAF LFD G I ++ +RALG P + ++KK + D I FE FL
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVEKEV 161
+ A K D+ ++ ++ R FD D +G I+ +LR + LG NL E+E+
Sbjct: 89 MMTA--KMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTEEEL 139
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEV 100
S +E L+AF+LFD+ I + + V + LG+N TE ++++ D I +
Sbjct: 99 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
Query: 101 FLPIYQAIS 109
F+ I + S
Sbjct: 159 FIRIMKKTS 167
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 39 KVMTSID--EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERI 96
KV+T+ + EY EAFQLFD DNK+ ++G V+RALG NPT+ + + + + D
Sbjct: 6 KVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Query: 97 SF--EVFLPI 104
F E FL I
Sbjct: 66 KFDQETFLTI 75
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I V ++G V+R LGQ PT+ ++ ++ D I FE F
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L + + +KG+S ++ E R FD++ +G+I + EL + G ++
Sbjct: 76 LVMMVRQMKEDAKGKS---EEELAECFRIFDRNADGYIDAEELAEIFRASGEHVT 127
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 22 LQFSQVLFKMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTEC 81
+ F + L M + S +E E F++FD D I ++ + RA G++ T+
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDE 129
Query: 82 DVKKYSQ--QHKSDERISFEVFLPIYQAI 108
+++ + +D RI F+ FL + + +
Sbjct: 130 EIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I+E EAF+ FD D I+ +GN +R +G PTE ++ + SQQ + + F+ F
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 102 LPIYQAISKGRSADT--ADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
+ + +AD + + R FD +G+G IS++ELR + L
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 41 MTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRA-LGQNPTECDVKKYSQ--QHKSDERIS 97
M + E +AF+ FD GD +I S++ +RA LG D+++ + D R+
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVD 143
Query: 98 FEVFL 102
FE F+
Sbjct: 144 FEEFV 148
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
E R FDKD +G+I+ +L + + T+G + + L+E
Sbjct: 15 EAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 51
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I+E EAF+ FD D I+ +GN +R +G PTE ++ + SQQ + + F+ F
Sbjct: 24 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 83
Query: 102 LPIYQAISKGRSADT--ADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
+ + +AD + + R FD +G+G IS++ELR + L
Sbjct: 84 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 131
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 103 PIYQAISKGRS--ADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
P+ K RS + ++ E R FDKD +G+I+ +L + + T+G + + L+E
Sbjct: 8 PLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 65
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 41 MTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRA-LGQNPTECDVKKYSQ--QHKSDERIS 97
M + E +AF+ FD GD +I S++ +R LG D+++ + D R+
Sbjct: 98 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 157
Query: 98 FEVFL 102
FE F+
Sbjct: 158 FEEFV 162
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I V ++G V+R LGQ PT+ ++ ++ D I FE F
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 102 LPI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
L + + +KG+S ++ E R FD++ +G+I + EL + G ++
Sbjct: 76 LVMMVRQMKEDAKGKS---EEELAELFRIFDRNADGYIDAEELAEIFRASGEHVT 127
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I+E EAF+ FD D I+ +GN +R +G PTE ++ + SQQ + + F+ F
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 102 LPIYQAISKGRSADT--ADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
+ + +AD + + R FD +G+G IS++ELR + L
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 117
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
E R FDKD +G+I+ +L + + T+G + + L+E
Sbjct: 15 EAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 51
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 41 MTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRA-LGQNPTECDVKKYSQ--QHKSDERIS 97
M + E +AF+ FD GD +I S++ +R LG D+++ + D R+
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 143
Query: 98 FEVFL 102
FE F+
Sbjct: 144 FEEFV 148
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISKGRSADTADDFIEGLR 125
L + K + D+ ++ E R
Sbjct: 69 LTMM--ARKMKDTDSEEEIREAFR 90
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 102 LPI 104
L +
Sbjct: 70 LTM 72
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 41
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LTM 71
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLG 40
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 51 FQLFDNRGDNKIHVSQIGNVLRALGQNPTE---CDVKKYSQQHKSDERISFEVFLPIYQA 107
F LFD +G I +G+ LRA+G NPT D+ + ++ + + +
Sbjct: 10 FTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEV 69
Query: 108 ISKGRSADT---ADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
K A T +DF++ + FDK+ G +S +LR++LT LG ++
Sbjct: 70 NEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT 117
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDV 83
+++++AFQ+FD K+ V + +L LG+ T+ +V
Sbjct: 83 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF LFD GD I ++G V+R+LGQNPTE +++ + +D I F F
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 L 102
L
Sbjct: 69 L 69
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLG 40
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
E EAF LFD G I ++ +RALG P + ++KK D I FE FL
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ A R D+ ++ ++ R FD D G IS L+ + LG M+ L E
Sbjct: 69 MMTAKMGER--DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEV 100
S +E ++AF+LFD+ KI + V + LG+N T+ ++++ D ++ E
Sbjct: 79 SREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
Query: 101 FLPIYQAIS 109
F I + S
Sbjct: 139 FFRIMKKTS 147
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 96 ISFEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
I F FL + K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 18 IDFPEFLTMMA--RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 110 KGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
K + D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 39
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 67 FVQMMTA 73
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ EAF L+D GD I ++G V+R+LG NPTE +++ + +D I F F
Sbjct: 9 IAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 102 LPIYQAISK 110
L + I K
Sbjct: 69 LTMMARIMK 77
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E +DKDG+G I++ EL ++ +LG
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLG 40
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 112 RSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 38
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 66 FVQMMTA 72
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVF 101
+ I E+ EAF + D D I + ++L ++G+NPT D ++ I+F +F
Sbjct: 4 SQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPT--DEYLEGMMSEAPGPINFTMF 61
Query: 102 LPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
L ++ K D D FD++ +GFI LR LLTT+G+
Sbjct: 62 LTMFG--EKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGD 107
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 115 DTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 35
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 63 FVQMMTA 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 113 SADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 36
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 64 FVQMMTA 70
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 114 ADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D+ ++ E R FDKDGNG+IS+AELRH++T LG
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 35
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 101 FLPI 104
F+ +
Sbjct: 63 FVQM 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 112 RSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ D+ ++ IE + FD+DGNG IS+AELRH++T LG
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG 38
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERI 96
K S +E +EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D I
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 97 SFEVFLPI 104
++E F+ +
Sbjct: 62 NYEEFVRM 69
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG+S + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG+S + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEE 135
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG+S + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEE 135
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVFLP 103
E EAF LFD G I V ++ +RALG P + ++KK + + +++F FL
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ K DT ++ ++ + FD D G IS L+ + LG ++ L E
Sbjct: 67 VM--TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 119
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVFL 102
+E L+AF+LFD+ KI + V + LG+N T+ ++++ + D +S + FL
Sbjct: 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Query: 103 PIYQ 106
I +
Sbjct: 139 RIMK 142
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+C++ + D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
Query: 102 L 102
L
Sbjct: 79 L 79
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG++ + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTLG 148
E R FDKDGNG+IS+AELRH++T LG
Sbjct: 6 EAFRVFDKDGNGYISAAELRHVMTNLG 32
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFL 102
+E EAF++FD G+ I +++ +V+ LG+ T+ +V + ++ D ++++E F+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 103 PIYQA 107
+ A
Sbjct: 62 QMMTA 66
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 115 DTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D+ ++ E R FDKD NGFIS+AELRH++T LG
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG 34
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD + I +++ +V+ LG+ T+ +V + ++ D +I++E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 62 FVKVMMA 68
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 113 SADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D+ ++ E R FDKDGNG+IS+A+LRH++T LG
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLG 37
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEV 100
S +E EAF++FD G+ I + + +V+ LG+ T+ +V + ++ D ++++E
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 101 FLPIYQA 107
F+ + A
Sbjct: 65 FVQMMTA 71
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG++ + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRCMKDDSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 135
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 112 RSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+ D+ ++ E R DKDGNG+IS+AELRH++T LG
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG 59
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 34 YEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--K 91
++ + K S +E EAF++ D G+ I +++ +V+ LG+ T+ +V + ++
Sbjct: 18 FQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 77
Query: 92 SDERISFEVFLPIYQA 107
D ++++E F+ + A
Sbjct: 78 GDGQVNYEEFVQMMTA 93
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG+S + D R +DK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDL---FRMWDKNADGYIDLDELKIMLQATGETITEDDIEE 135
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 103 PI----YQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ + SKG+S + D R DK+ +G+I EL+ +L G ++ ++ E
Sbjct: 79 VMMVRSMKDDSKGKSEEELSDL---FRMXDKNADGYIDLDELKIMLQATGETITEDDIEE 135
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
++ EAF LFD GD I V ++ V+R+L QNPTE +++ + +D I F+ FL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 104 I 104
+
Sbjct: 71 L 71
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTL 147
DF E FDKDG+G I+ EL ++ +L
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
++ EAF LFD GD I V ++ V+R+L QNPTE +++ + +D I F+ FL
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 104 I 104
+
Sbjct: 71 L 71
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTL 147
DF E FDKDG+G I+ EL ++ +L
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSL 39
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 8 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
Query: 102 L 102
L
Sbjct: 68 L 68
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I ++G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 L 102
L
Sbjct: 79 L 79
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVF 101
I E+ AF +FD G I +G V+R LGQNPT+ ++ ++ D I FE F
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 102 L 102
L
Sbjct: 79 L 79
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIY 105
E EAF + D D I + + ++ +LG+ P + ++ ++ +++F FL ++
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPG--QLNFTAFLTLF 74
Query: 106 QAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
G D D FD+DG GFI L+ LL +G+ S
Sbjct: 75 GEKVSG--TDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFS 119
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSD--ERISFEVF 101
I E+ EAF LFD + I S++ V+R+LG +P+E +V + D +I F F
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 102 LPI 104
L +
Sbjct: 69 LAL 71
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 119 DFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
+F E FDKD NG ISS+EL ++ +LG
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLG 40
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY---SQQHKSDERISF 98
T I+++ EAF + D D I + A+G+ +VK + ++ I+F
Sbjct: 22 TEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGR----LNVKNEELDAMIKEASGPINF 77
Query: 99 EVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
VFL ++ KG AD D + + D DG G I + L LLTT G
Sbjct: 78 TVFLTMFGEKLKG--ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGG 126
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 115 DTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D ++ E + FDKD NG+IS++ELRH++ LG
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLG 34
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFL 102
+E EAF++FD + I S++ +V+ LG+ T+ +V++ ++ D ++++E F+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 103 PIYQAI 108
+ +
Sbjct: 64 KMMMTV 69
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY---SQQHKSDERISF 98
T I+++ EAF + D D I + A+G+ +VK + ++ I+F
Sbjct: 4 TEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGR----LNVKNEELDAMIKEASGPINF 59
Query: 99 EVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
VFL ++ KG AD D + + D DG G I + L LLTT G
Sbjct: 60 TVFLTMFGEKLKG--ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGG 108
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEV 100
S +E F++FD D I + ++G +LRA G++ E D++ +D RI F+
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 101 FLPIYQAI 108
FL + + +
Sbjct: 68 FLKMMEGV 75
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 114 ADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
D ++ E + FDKD NG+IS++ELRH++ LG
Sbjct: 5 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLG 39
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQH--KSDERISFEVFL 102
+E EAF++FD + I S++ +V+ LG+ T+ +V++ ++ D ++++E F+
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 103 PIYQAI 108
+ +
Sbjct: 69 KMMMTV 74
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ 89
I+E EAF+ FD D I+ +GN +R +G PTE ++ + SQQ
Sbjct: 8 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ 54
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
E R FDKD +G+I+ +L + + T+G + + L+E
Sbjct: 14 EAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 50
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 108 ISKGRSADTADDFIEGLRH----FDKDGNGFISSAELRHLLTTLGNFMSWVNLVEKEVI 162
+S+ R D +D +E +R FD+DGNGFIS EL + +LG +M N VE EVI
Sbjct: 22 LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLG-YMP--NEVELEVI 77
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 36 PVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSD 93
PV+ ++E EAF++FD G+ I ++G +R+LG P E +++ Q+ D
Sbjct: 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGD 86
Query: 94 ERISFEVFL 102
++ FE F+
Sbjct: 87 GQVDFEEFV 95
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 61 KIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIYQAISKGRSADTADDF 120
KI + R LG P+ D KK + + + +++E +L Y +I D ++
Sbjct: 31 KISIDNASYNARKLGLAPSSIDEKKIKELYG--DNLTYEQYLE-YLSICV-HDKDNVEEL 86
Query: 121 IEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
I+ HFD + G+++ ++++++LTT G+ ++
Sbjct: 87 IKMFAHFDNNCTGYLTKSQMKNILTTWGDALT 118
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQN--PTECDVKKYSQQHKSDERISFEVF 101
+ E+ EAF+LFD+ I + VL+ G P + + +I F F
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEF 64
Query: 102 LPIYQAISKGRSADTADDFI-EGLRHFDKDGNGFISSAELRHLLTTLGN------FMSWV 154
L + + + T++D + + R FD +G G+I A L+ L LG+ F ++
Sbjct: 65 LSM---MGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 155 NLVEKE 160
+ E E
Sbjct: 122 GITETE 127
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 61 KIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIYQAISKGRSADTADDF 120
K+ + + R LG P+ D KK + + +++E +L R D ++
Sbjct: 12 KLRIEDASHNARKLGLAPSSTDEKKIRDLYG--DSLTYEQYLEYLTXCVHDR--DNXEEL 67
Query: 121 IEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
I+ HFD + +GF++ + +++LTT G+ ++
Sbjct: 68 IKXFSHFDNNSSGFLTKNQXKNILTTWGDALT 99
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVF 101
+E ++ F FDN + +Q N+L G TE + S++RI++++F
Sbjct: 65 EELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDALNAFSSEDRINYKLF 121
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
E EAF LFD G I ++ +RALG P + ++KK + D I FE FL
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 90
Query: 104 IYQA 107
+ A
Sbjct: 91 MMTA 94
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 42 TSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY---SQQHKSDERISF 98
T I ++ EAF + D D I + A+G+ +VK + ++ I+F
Sbjct: 9 TQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGR----LNVKNEELDAMIKEASGPINF 64
Query: 99 EVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTT 146
VFL ++ KG AD D + + D DG G I + L LLTT
Sbjct: 65 TVFLTMFGEKLKG--ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT 110
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 50 AFQLFDN-RGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHK--SDERISFEVFLPIYQ 106
AF+ F+ G ++ QIG +L LG T+ +++ + + I F+ F I
Sbjct: 18 AFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSF-KIIG 76
Query: 107 AISKGRSADTAD---DFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
A G + + E R +DK+GNG+IS+ +R +L L +S +L
Sbjct: 77 ARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 129
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 15/119 (12%)
Query: 34 YEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALG----QNPTECDVKKYSQQ 89
Y P + M E +E F+ D G I V ++ L + G TE + Y +
Sbjct: 16 YAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKN 75
Query: 90 HKSDERISFEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
H + I+F+ F ++ I R EG R D G+G + S E+R L + G
Sbjct: 76 HSGE--ITFDEFKDLHHFILSMR---------EGFRKRDSSGDGRLDSNEVRAALLSSG 123
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALG--QNPTECDVKKYSQQHKSDERISFEVFLP 103
E EAF LFD G I V ++ RALG E + + +F FL
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLT 91
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
+ K DT ++ ++ + FD D G IS L+ + LG ++ L E
Sbjct: 92 VX--TQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEVFL 102
+E L+AF+LFD+ KI + V + LG+N T+ ++++ D +S + FL
Sbjct: 104 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
Query: 103 PIYQAIS 109
I + S
Sbjct: 164 RIXKKTS 170
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKK 85
E EAF LFD G I V ++ +RALG P + ++KK
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKK 71
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 51 FQLFDNRGDNKIHVSQIGNVLRALGQ-NPTECDVKKYSQQHKSDERISFEVFLPIYQA 107
F+ FD GD KI S++G+ L+ LG P E D ISF+ F +A
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 124 LRHFDKDGNGFISSAELRHLLTTLGN 149
+ FD +G+G ISS+EL L TLG+
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS 42
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 51 FQLFDNRGDNKIHVSQIGNVLRALGQNPT 79
F LFD +G I +G+ LRA+G NPT
Sbjct: 10 FTLFDKKGQGAIAKDSLGDYLRAIGYNPT 38
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 117 ADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
+DF++ + FDK+ G +S +LR++LT LG ++
Sbjct: 4 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT 39
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDV 83
+++++AFQ+FD K+ V + +L LG+ T+ +V
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 43
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLP 103
+ E+ EAFQL D D I + I +LG+ TE ++ S ++ I+F +FL
Sbjct: 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELD--SMVAEAPGPINFTMFLT 113
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
I+ G D D + FD+ G+G L+ LTT G
Sbjct: 114 IFGDRIAG--TDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWG 155
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ--HKSDERISFEVFL 102
+E L+AF+LFD+ KI + V + LG+N T+ ++++ + D +S + FL
Sbjct: 21 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 80
Query: 103 PIYQAIS 109
I + S
Sbjct: 81 RIMKKTS 87
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEV 100
S +E L+AF+LFD+ I + + V + LG+N TE ++++ D I +
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 101 FLPIYQAIS 109
F+ I + S
Sbjct: 67 FIRIMKKTS 75
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 115 DTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVEKEV 161
D+ ++ ++ R FD D +G I+ +LR + LG NL E+E+
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTEEEL 47
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKY--SQQHKSDERISFEVFL 102
+E L+AF+LFD+ KI + V + LG+N T+ ++++ D +S + FL
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
Query: 103 PIYQAIS 109
I + S
Sbjct: 71 RIMKKTS 77
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLF-DNRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F + D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT 53
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLF-DNRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F + D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPT 53
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
E R +DK+GNG+IS+ +R +L L +S +L
Sbjct: 7 EAFRLYDKEGNGYISTDVMREILAELDETLSSEDL 41
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLF-DNRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPT 53
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 32/116 (27%)
Query: 35 EPVNKVM--TSIDEYLE-AFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHK 91
E NK + T + EY + +LFD+ D K+ ++++ +L P +
Sbjct: 134 EKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL------PVQ----------- 176
Query: 92 SDERISFEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
E FL +Q I +F + +D+DGNG+I EL LL L
Sbjct: 177 -------ENFLLKFQGIKM-----CGKEFNKAFELYDQDGNGYIDENELDALLKDL 220
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 116 TADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
TA F E HFD DG+G++ EL++L+ L
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQNLIQEL 45
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 35/118 (29%)
Query: 30 KMYGYEPVNKVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQ 89
K G E ++ T +D+Y R D KI + ++ +VL PTE
Sbjct: 50 KKAGLELSPEMKTFVDQY-------GQRDDGKIGIVELAHVL------PTE--------- 87
Query: 90 HKSDERISFEVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
E FL +++ + + ++F++ R +D D +GFI + EL++ L L
Sbjct: 88 ---------ENFLLLFRC----QQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDL 132
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
E+ AF +F D I ++G V+R LGQNPT ++++ + D + F+ FL
Sbjct: 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
D+ F+ FD GD KI +S++ + LR LG + +V++ + +D I F F+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 61
Query: 103 PIYQA 107
A
Sbjct: 62 SFCNA 66
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 117 ADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
ADD + FD +G+G IS +EL L TLG+
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGS 34
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFL 102
D+ F+ FD GD KI +S++ + LR LG + +V++ + +D I F F+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFI 60
Query: 103 PIYQA 107
A
Sbjct: 61 SFCNA 65
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 117 ADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
ADD + FD +G+G IS +EL L TLG+
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGS 33
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 41 MTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRA-LGQNPTECDVKKYSQ--QHKSDERIS 97
M + E +AF+ FD GD +I S++ +R LG D+++ + D R+
Sbjct: 3 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVD 62
Query: 98 FEVFLPI 104
FE F+ +
Sbjct: 63 FEEFVRM 69
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 122 EGLRHFDKDGNGFISSAELRHLLTTL 147
+ R FD +G+G IS++ELR + L
Sbjct: 11 DAFREFDTNGDGEISTSELREAMRKL 36
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 43 SIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALG 75
S +E AF++FD D I + ++G +LRA G
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT 53
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT 53
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F D I ++G V+R LGQNPT
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPT 53
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIY 105
E EAF + D D I ++ + +LG+ P + ++ ++ ++F +FL I+
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPG--PLNFTMFLSIF 60
Query: 106 QAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGN 149
K D+ + FD+D ++ ++ LL +G+
Sbjct: 61 S--DKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGD 102
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 49 EAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLPIYQ 106
E F D +I ++ L+ +G N E ++ Q D I ++ F+
Sbjct: 31 EXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAATL 90
Query: 107 AISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
++K + D +FDKDG+G+I+ EL+ G
Sbjct: 91 HLNK---IEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNP-TECDVKKYSQQHKSD 93
+E L AF++FD GD I + +++ +G+ P T+ +V++ ++ D
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADED 57
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 125 RHFDKDGNGFISSAELRHLLTTLGNFMSWVNL 156
R FD+DG+G I+ ELR + LG + L
Sbjct: 13 RAFDQDGDGHITVDELRRAMAGLGQPLPQEEL 44
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 50 AFQLFDNRGDNKIHVSQIGNVLRALGQ--NPTECDVKKYSQQHKSDERISFEVF 101
AF+ FD GD I V ++ + LGQ E D D R+++E F
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVK 84
+DE AFQLFD+ KI + + V + LG+ T+ +++
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
E EAF LFD D + ++ ++ALG + ++ ++ S+ R + ++ F
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
+ K D D+ + FD D G IS LR + LG ++
Sbjct: 84 VMG--EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLT 130
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVK 84
+DE AFQLFD+ KI + + V + LG+ T+ +++
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELR 135
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLP 103
E EAF LFD D + ++ +ALG + ++ ++ S+ R ++ F
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYI 83
Query: 104 IYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMS 152
+ K D D+ + FD D G IS LR + LG ++
Sbjct: 84 VXG--EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLT 130
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQ-----QHKSD 93
+++ S + L AFQ FD+ G KI ++G + TE D + + Q +D
Sbjct: 117 QLLLSRERLLAAFQQFDSDGSGKITNEELGRLF-----GVTEVDDETWHQVLQECDKNND 171
Query: 94 ERISFEVFLPIYQAI 108
+ FE F+ + Q I
Sbjct: 172 GEVDFEEFVEMMQKI 186
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 124 LRHFDKDGNGFISSAELRHLLTTLGN 149
+ FD +G+G IS+AEL L TLG+
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS 40
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 46 EYLEAFQLFD-NRGDNKIHVSQIGNVLRALGQNPT 79
E+ AF +F D I ++G V R LGQNPT
Sbjct: 19 EFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPT 53
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 49 EAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDER--ISFEVFLPIYQ 106
E F++ D I ++ + L+ +G E ++K D+ I + F+
Sbjct: 14 ELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATV 73
Query: 107 AISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLG 148
++K + ++ + +FDKDG+G+I+ E++ G
Sbjct: 74 HLNK---LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG 112
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 99 EVFLPIYQAISKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTL 147
E FL I++ + D + +F + R +D D +G+IS+AEL++ L L
Sbjct: 88 ENFLLIFR---REAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDL 133
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 120 FIEGLRHFDKDGNGFISSAEL----RHLLTTL 147
F++ +HFD D NG+I EL RH L L
Sbjct: 13 FLQIWQHFDADDNGYIEGKELDDFFRHXLKKL 44
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQ-----QHKSD 93
+++ S + L AFQ FD+ G KI ++G + TE D + + Q +D
Sbjct: 391 QLLLSRERLLAAFQQFDSDGSGKITNEELGRLF-----GVTEVDDETWHQVLQECDKNND 445
Query: 94 ERISFEVFLPIYQAI 108
+ FE F+ + Q I
Sbjct: 446 GEVDFEEFVEMMQKI 460
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 44 IDEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLP 103
I E EAF + D D I ++ + + +LG+ P + ++ ++ ++F +FL
Sbjct: 18 IQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPG--PLNFTMFLS 75
Query: 104 IY 105
I+
Sbjct: 76 IF 77
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 109 SKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFM 151
+KG S + ++F HFD+ G + + R L ++G M
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNM 758
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 109 SKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
SKG++ + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 9 SKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 55
>pdb|2VRB|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(H)
Length = 287
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 99 EVFLPIYQAISKGRSADTADDF 120
E+ IY AISKG ++ T+DD
Sbjct: 246 EITAAIYDAISKGEASKTSDDL 267
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 109 SKGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
SKG++ + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 4 SKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 50
>pdb|2JL1|A Chain A, Structural Insight Into Bioremediation Of Triphenylmethane
Dyes By Citrobacter Sp. Triphenylmethane Reductase
Length = 287
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 99 EVFLPIYQAISKGRSADTADDF 120
E+ IY AISKG ++ T+DD
Sbjct: 246 EITAAIYDAISKGEASKTSDDL 267
>pdb|2VRC|A Chain A, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
pdb|2VRC|B Chain B, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
pdb|2VRC|C Chain C, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
Length = 287
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 99 EVFLPIYQAISKGRSADTADDF 120
E+ IY AISKG ++ T+DD
Sbjct: 246 EITAAIYDAISKGEASKTSDDL 267
>pdb|2VRC|D Chain D, Crystal Structure Of The Citrobacter Sp. Triphenylmethane
Reductase Complexed With Nadp(h)
Length = 287
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 99 EVFLPIYQAISKGRSADTADDF 120
E+ IY AISKG ++ T+DD
Sbjct: 246 EITAAIYDAISKGEASKTSDDL 267
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 110 KGRSADTADDFIEGLRHFDKDGNGFISSAELRHLLTTLGNFMSWVNLVE 158
KG+S + D R FDK+ +G+I EL+ +L G ++ ++ E
Sbjct: 2 KGKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 47
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVL 71
K + S D+ AFQ FD G+ KI V ++ +V
Sbjct: 137 KSLLSKDKLESAFQKFDQDGNGKISVDELASVF 169
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 39 KVMTSIDEYLEAFQLFDNRGDNKIHVSQIGNVL 71
K + S D+ AFQ FD G+ KI V ++ +V
Sbjct: 420 KSLLSKDKLESAFQKFDQDGNGKISVDELASVF 452
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIY 105
E EAF + D D I ++ + + +LG+ P + ++ ++ ++F +FL I+
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPG--PLNFTMFLSIF 81
>pdb|1J7Q|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
pdb|1J7R|A Chain A, Solution Structure And Backbone Dynamics Of The Defunct
Ef- Hand Domain Of Calcium Vector Protein
Length = 86
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 45 DEYLEAFQLFDNRGDNKIHVSQIGNVLRALGQN 77
DE ++ F +FD +N VS ++L LGQ
Sbjct: 14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQT 46
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 46 EYLEAFQLFDNRGDNKIHVSQIGNVLRALGQNPTECDVKKYSQQHKSDERISFEVFLPIY 105
E EAF + D D I ++ + + +LG+ P + ++ ++ ++F +FL I+
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPG--PLNFTMFLSIF 81
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 127 FDKDGNGFISSAELRHLLTTLGNFMSWV 154
+D DGNG+IS AE+ ++ + +S V
Sbjct: 108 YDLDGNGYISKAEMLEIVQAIYKMVSSV 135
>pdb|2JMM|A Chain A, Nmr Solution Structure Of A Minimal Transmembrane Beta-
Barrel Platform Protein
Length = 156
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/12 (83%), Positives = 12/12 (100%)
Query: 128 DKDGNGFISSAE 139
DKDGNG+IS+AE
Sbjct: 90 DKDGNGYISAAE 101
>pdb|1GQQ|A Chain A, Murc - Crystal Structure Of The Apo-Enzyme From
Haemophilus Influenzae
pdb|1GQQ|B Chain B, Murc - Crystal Structure Of The Apo-Enzyme From
Haemophilus Influenzae
pdb|1GQY|A Chain A, Murc- Crystal Structure Of The Enzyme From Haemophilus
Influenzae Complexed With Amppcp
pdb|1GQY|B Chain B, Murc- Crystal Structure Of The Enzyme From Haemophilus
Influenzae Complexed With Amppcp
Length = 475
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 75 GQNPTECDVK-KYSQQHKSDERISFEVFLPIYQAISKGRSADTADDFIEGLRHFD 128
G +PTE V K +++ D+RI I+Q R+ D DDF++ L D
Sbjct: 347 GHHPTEVGVTIKAAREGWGDKRIVM-----IFQPHRYSRTRDLFDDFVQVLSQVD 396
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,920,589
Number of Sequences: 62578
Number of extensions: 191391
Number of successful extensions: 1074
Number of sequences better than 100.0: 213
Number of HSP's better than 100.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 519
Number of HSP's gapped (non-prelim): 417
length of query: 165
length of database: 14,973,337
effective HSP length: 91
effective length of query: 74
effective length of database: 9,278,739
effective search space: 686626686
effective search space used: 686626686
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)