BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13767
(801 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1V5R|A Chain A, Solution Structure Of The Gas2 Domain Of The Growth Arrest
Specific 2 Protein
Length = 97
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 729 IHDEVKRLVQ--LCTCRQKFRVFQVGEGKYRFGDSQKLRLVRILRST-VMVRVGGGWVAL 785
+ D VKR+ + C C KF V ++ +G+YR G +K+ +R+L + VMVRVGGGW
Sbjct: 10 LDDAVKRISEDPPCKCPTKFCVERLSQGRYRVG--EKILFIRMLHNKHVMVRVGGGWETF 67
Query: 786 DEFLIKNDPCR 796
+L+K+DPCR
Sbjct: 68 AGYLLKHDPCR 78
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKL--------EMGAVADMFDHDYNPGL 703
LTD+FR +DKN DG + R++ +DG K E + E+ A+ D D N G
Sbjct: 348 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN-GY 406
Query: 704 IDWKEFIAA 712
ID+ EF+
Sbjct: 407 IDYSEFVTV 415
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKL--------EMGAVADMFDHDYNPGL 703
LTD+FR +DKN DG + R++ +DG K E + E+ A+ D D N G
Sbjct: 65 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRN-GY 123
Query: 704 IDWKEFIAA 712
ID+ EF+
Sbjct: 124 IDYSEFVTV 132
>pdb|1S35|A Chain A, Crystal Structure Of Repeats 8 And 9 Of Human Erythroid
Spectrin
Length = 214
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 241 LAEKFWSELQSVMATLRDLQDNLNSQEPPAVEPKAIQQ-QQYALKEIKAEIDQTKPEVEQ 299
+ + F +L A L Q + S++ P P+A Q QQ+A IK EID + ++
Sbjct: 1 MEQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHA--GIKDEIDGHQDSYQR 58
Query: 300 CRASGQKLMKICGEPDKPEVKKHIEDLDSAWDNVTALFAKREENLIHAMEKAMEFHETLQ 359
+ SG+K+++ +P+ + + +E LD+ WD + ++ R H + + + F E Q
Sbjct: 59 VKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRS----HTLAQCLGFQE-FQ 113
Query: 360 RKGEQGTITALFAKREENLIH 380
+ +Q A+ + +E L H
Sbjct: 114 KDAKQA--EAILSNQEYTLAH 132
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 15/76 (19%)
Query: 651 RLTDLFRKMDKNNDGLIPREDFVDG--------------IIKTKFETSKLEMGAVADMFD 696
+LT++FRK+D NNDG++ R++ V G +I+ + T + ++ ++ + D
Sbjct: 332 QLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLD 391
Query: 697 HDYNPGLIDWKEFIAA 712
D G I++ EFIA+
Sbjct: 392 MD-GSGSIEYSEFIAS 406
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDG---IIKTKFETSKL--------EMGAVADMFDHDYN 700
LT +F KMDKN DG + R + ++G +++ K + + + E+ V D D D N
Sbjct: 360 LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKN 419
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 420 -GYIEYSEFVTV 430
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDG---IIKTKFETSKL--------EMGAVADMFDHDYN 700
LT +F KMDKN DG + R + ++G +++ K + + + E+ V D D D N
Sbjct: 361 LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKN 420
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 421 -GYIEYSEFVTV 431
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDG---IIKTKFETSKL--------EMGAVADMFDHDYN 700
LT +F KMDKN DG + R + ++G +++ K + + + E+ V D D D N
Sbjct: 337 LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKN 396
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 397 -GYIEYSEFVTV 407
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 36.6 bits (83), Expect = 0.057, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 635 DDWRKRFLRFMNHKKSRLTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADM 694
DD + R + L +LF+ +D +N G I ++ DG+ + E + E+ + D
Sbjct: 8 DDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDA 67
Query: 695 FDHDYNPGLIDWKEFIAA 712
D D G ID+ EFIAA
Sbjct: 68 ADID-KSGTIDYGEFIAA 84
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 36.6 bits (83), Expect = 0.063, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFIA 711
L +LF+ +D +N G I ++ DG+ + E + E+ + D D D G ID+ EFIA
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADID-KSGTIDYGEFIA 70
Query: 712 A 712
A
Sbjct: 71 A 71
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADM----------FDHDYNP 701
LTD+F+K+DKN DG + +++ ++G K E+G + ++ D D N
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGY--NVLRNFKNELGELKNVEEEVDNILKEVDFDKN- 413
Query: 702 GLIDWKEFIAA 712
G I++ EFI+
Sbjct: 414 GYIEYSEFISV 424
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 623 LIELEKVKNFSWDDWRKRFLRFMNHKKSRLTDLFRKM-DKNNDG---------LIP-RED 671
IE E++KNF D K + K + TDL K+ D NNDG L+P +E+
Sbjct: 119 FIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQEN 178
Query: 672 FVDGIIKTKFETSKL---EMGAVADMFDHDYNPGLIDWKEFIAALRPDWEEKKPNTESEK 728
F+ KF+ K+ E +++D D N G ID E A L+ E+ K +
Sbjct: 179 FL-----LKFQGIKMCGKEFNKAFELYDQDGN-GYIDENELDALLKDLCEKNKQELDINN 232
Query: 729 IHDEVKRLVQLCTCRQKFRV 748
I K ++ L + +R
Sbjct: 233 ISTYKKNIMALSDGGKLYRT 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIK---------TKFETSKL--EMGAVADMFDHDYN 700
LT +FR++D N DG + R++ ++G K + ++S++ E+ + D D N
Sbjct: 316 LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRN 375
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 376 -GYIEYSEFVTV 386
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIK---------TKFETSKL--EMGAVADMFDHDYN 700
LT +FR++D N DG + R++ ++G K + ++S++ E+ + D D N
Sbjct: 42 LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRN 101
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 102 -GYIEYSEFVTV 112
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDG---IIKTKFE-TSKLEMGA-------VADMFDHDYN 700
LT +F K DKN DG + R + ++G + + K + S L+ A V D D D N
Sbjct: 337 LTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKN 396
Query: 701 PGLIDWKEFIAA 712
G I++ EF+
Sbjct: 397 -GYIEYSEFVTV 407
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 652 LTDLFRKMDKN--NDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEF 709
L +LF+K+ +DGLI +E+F + KT + L V D+FD +N G++ ++EF
Sbjct: 19 LYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHN-GILGFEEF 76
Query: 710 IAALRPDWEEKKPNTESEKIHDEVKRLVQLCTCRQK 745
AL PN I D++ QL +Q+
Sbjct: 77 ARALSV----FHPNA---PIDDKIHFSFQLYDLKQQ 105
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 652 LTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFIA 711
L FR++D++ + ++F G+ K + E V +D + G +D +EF+
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRN-GSGTLDLEEFLR 97
Query: 712 ALRP 715
ALRP
Sbjct: 98 ALRP 101
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 652 LTDLFRKMDKN--NDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEF 709
L +LF+K+ +DGLI +E+F + KT + L V D+FD +N G++ ++EF
Sbjct: 50 LYELFKKISSAVIDDGLINKEEFQLALFKTN-KKESLFADRVFDLFDTKHN-GILGFEEF 107
Query: 710 IAAL 713
AL
Sbjct: 108 ARAL 111
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 651 RLTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFI 710
RL F+K+D +N G + E+F+ + + + L + V D+FD D N G +D+KEFI
Sbjct: 22 RLGKRFKKLDLDNSGSLSVEEFMS---LPELQQNPL-VQRVIDIFDTDGN-GEVDFKEFI 76
Query: 711 AAL 713
+
Sbjct: 77 EGV 79
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 596 RLLWDTWRNVWLLAWERQRRLQERLNYLIELEKVKNFSWDDWRKRFLRFMNHKKSRLTDL 655
R ++ +V + W+ R LQ +++ N ++ ++ R+ N + + L
Sbjct: 59 REIYTVLASVGIKKWDINRILQA-----LDINDRGNITYTEFMAGCYRWKNIESTFLKAA 113
Query: 656 FRKMDKNNDGLIPREDFV 673
F K+DK+ DG I + D V
Sbjct: 114 FNKIDKDEDGYISKSDIV 131
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 651 RLTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFI 710
RL F+K+D +N G + E+F+ + + + L + V D+FD D N G +D+KEFI
Sbjct: 21 RLGKRFKKLDLDNSGSLSVEEFMS---LPELQQNPL-VQRVIDIFDTDGN-GEVDFKEFI 75
Query: 711 AAL 713
+
Sbjct: 76 EGV 78
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 651 RLTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFI 710
RL F+K+D +N G + E+F+ + + + L + V D+FD D N G +D+KEFI
Sbjct: 8 RLGKRFKKLDLDNSGSLSVEEFMS---LPELQQNPL-VQRVIDIFDTDGN-GEVDFKEFI 62
Query: 711 AAL 713
+
Sbjct: 63 EGV 65
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 651 RLTDLFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFI 710
RL F+K+D +N G + E+F+ + + + L + V D+FD D N G +D+KEFI
Sbjct: 7 RLGKRFKKLDLDNSGSLSVEEFMS---LPELQQNPL-VQRVIDIFDTDGN-GEVDFKEFI 61
Query: 711 AAL 713
+
Sbjct: 62 EGV 64
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 655 LFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFIA 711
+F++ D N DG I + D ++T TS E+ + D D + G ID+ EFI+
Sbjct: 8 IFKRFDTNGDGKISLSELTDA-LRTLGSTSADEVQRMMAEIDTDGD-GFIDFNEFIS 62
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 655 LFRKMDKNNDGLIPREDFVDGIIKTKFETSKLEMGAVADMFDHDYNPGLIDWKEFIA 711
+F++ D N DG I + D ++T TS E+ + D D + G ID+ EFI+
Sbjct: 7 IFKRFDTNGDGKISLSELTDA-LRTLGSTSADEVQRMMAEIDTDGD-GFIDFNEFIS 61
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 630 KNFSWDD-WRKRFLRFMNHKKSR-----LTDLFRKMDKNNDGLIPREDFVDGIIKTKF-- 681
K FS + ++K LR + S L + F +D + G I E+ G+ +
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 682 -ETSKLEMGAVADMFDHDYNPGLIDWKEFIAA 712
E+ L++ AD+ N G ID+KEFIAA
Sbjct: 61 KESEILDLXQAADV----DNSGTIDYKEFIAA 88
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,713,169
Number of Sequences: 62578
Number of extensions: 917529
Number of successful extensions: 3439
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 3362
Number of HSP's gapped (non-prelim): 112
length of query: 801
length of database: 14,973,337
effective HSP length: 107
effective length of query: 694
effective length of database: 8,277,491
effective search space: 5744578754
effective search space used: 5744578754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)