BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13773
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 229 bits (585), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 172/291 (59%), Gaps = 60/291 (20%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN------------------ 43
+ YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIAN
Sbjct: 497 LVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 556
Query: 44 --ECQAN----FISVKGPELLTMWFGESEA---------------------NVRDIFDKV 76
E +AN F + ++F E ++ V D +
Sbjct: 557 FGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGM 616
Query: 77 TMENFRYAMGKSS------PSALR----ETIVEVPNITWEDIGGLEGVKRELQE--LVQD 124
+ + +G ++ P+ LR + ++ +P ++ L+ K L++ L D
Sbjct: 617 NAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP--LPDEASRLQIFKASLRKTPLSAD 674
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDE 184
+DLN++AK T GFSGADLTEICQRACKLAIR+SIE EIR+E+E+ + ME E
Sbjct: 675 LDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELA 734
Query: 185 DDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFP 235
D PVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 735 D-PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 27/111 (24%)
Query: 33 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDK----------------- 75
G+ + + +ANEC F+ G +L ++ SEA ++ I +K
Sbjct: 396 GEDVDLEQVANECHG-FV---GADLASLC---SEAAIQQIREKMELIDLEDDTIDAEVLN 448
Query: 76 ---VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFR+AMGKSSPSALRE +VE PN TW DIGGL+ VKRELQELVQ
Sbjct: 449 SLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE A F + GPE+++ GE
Sbjct: 227 LPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGE 286
Query: 65 SEANVRDIF 73
SE+N+R F
Sbjct: 287 SESNLRKAF 295
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 108/138 (78%), Gaps = 5/138 (3%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L ++VDL YIAKVT GFSGADLTEICQRACKLAIRQ+IE EIRRE+E+ A N ++ M
Sbjct: 663 LAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKER-AENQNSAMDM- 720
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
DEDDPVPEIT AHFEEAM+FARRSV+D DIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 721 --DEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGN 778
Query: 241 SQSGGPNSAPANESGTGG 258
+ SG N+ P N G G
Sbjct: 779 T-SGSGNNLPVNSPGDNG 795
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 70/71 (98%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 492 YPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 551
Query: 65 SEANVRDIFDK 75
SEANVRDIFDK
Sbjct: 552 SEANVRDIFDK 562
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 107/234 (45%), Gaps = 61/234 (26%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 220 PLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 279
Query: 66 EANVRDIF-----------------------DKVTMENFRY----------AMGKSS--- 89
E+N+R F DK E R M KSS
Sbjct: 280 ESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLI 339
Query: 90 -------PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
P+++ RE + +P+ T G LE ++ + +L DVDL
Sbjct: 340 VMAATNRPNSIDPALRRFGRFDREIDIGIPDAT----GRLEVLRIHTKNMKLHDDVDLEQ 395
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
IA ++G GADL +C A IR+ ++ I E +K+ AS A+ E+
Sbjct: 396 IAAESHGHVGADLASLCSEAALQQIREKMDL-IDLEDDKIDAEVLASLAVTMEN 448
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFRYAM KSSPSALRET+VEVPN TW DIGGLE VK+ELQELVQ
Sbjct: 444 VTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQ 491
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 102/116 (87%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD++++AK+TNGFSGADLTEICQRACKLAIR+SIE EIRRER++ NP+A ME
Sbjct: 666 VAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDR-QTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFP+
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPA 775
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GE
Sbjct: 222 LPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 281
Query: 65 SEANVRDIFDK 75
SE+N+R F++
Sbjct: 282 SESNLRKAFEE 292
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +D+DL ++AK T GFSGADLTEICQRACKLAIR+SIE EIR E+E+ ME
Sbjct: 673 LSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+D DPVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQQSRGFG NF+FP Q
Sbjct: 733 -DDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPG--EQ 789
Query: 241 SQSGGPNSAPA 251
S P SAP
Sbjct: 790 RGSDAP-SAPV 799
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 68/71 (95%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 501 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 560
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 561 SEANVRDVFDK 571
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 27/103 (26%)
Query: 41 IANECQANFISVKGPELLTMWFGESEANVRDIFDK--------------------VTMEN 80
IANEC F+ G +L ++ SEA ++ I +K VTMEN
Sbjct: 405 IANECHG-FV---GADLASLC---SEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMEN 457
Query: 81 FRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
FR+A GKSSPSALRE +VE PN TW DIGGL+ VKRELQELVQ
Sbjct: 458 FRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 500
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE + F + GPE+++ GE
Sbjct: 228 LPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGE 287
Query: 65 SEANVRDIFDK 75
SE+N+R F++
Sbjct: 288 SESNLRKAFEE 298
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 95/114 (83%), Gaps = 6/114 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE E R + NP+A ME
Sbjct: 666 VAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRF 234
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRF
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 113/176 (64%), Gaps = 38/176 (21%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETE 182
+DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE E R + NP+A ME E
Sbjct: 668 KDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENE-IRRERERQTNPSA---MEVE 723
Query: 183 DEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQSQ 242
EDDPVPEI + HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS+
Sbjct: 724 -EDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSS----- 776
Query: 243 SGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
+Q G S ++ G G + ++ +DDLY
Sbjct: 777 ---------------------------NQGGSGPSQGSSGGGGGNVFNEDNDDDLY 805
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVPNITWEDIGGL+ VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQ 494
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GE
Sbjct: 222 LPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 281
Query: 65 SEANVRDIFDK 75
SE+N+R F++
Sbjct: 282 SESNLRKAFEE 292
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 71/74 (95%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMW
Sbjct: 492 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 551
Query: 62 FGESEANVRDIFDK 75
FGESEANVR+IFDK
Sbjct: 552 FGESEANVREIFDK 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+E R + NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPS 775
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQ+LVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQ 494
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 71/74 (95%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMW
Sbjct: 492 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 551
Query: 62 FGESEANVRDIFDK 75
FGESEANVR+IFDK
Sbjct: 552 FGESEANVREIFDK 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+E R + NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPS 775
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 71/74 (95%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMW
Sbjct: 492 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 551
Query: 62 FGESEANVRDIFDK 75
FGESEANVR+IFDK
Sbjct: 552 FGESEANVREIFDK 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+E R + NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPS 775
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 71/74 (95%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMW
Sbjct: 492 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 551
Query: 62 FGESEANVRDIFDK 75
FGESEANVR+IFDK
Sbjct: 552 FGESEANVREIFDK 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+E R + NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPS 775
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 71/74 (95%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMW
Sbjct: 492 LVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 551
Query: 62 FGESEANVRDIFDK 75
FGESEANVR+IFDK
Sbjct: 552 FGESEANVREIFDK 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+E R + NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE-IRRERERQTNPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPS 236
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPS 775
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 498 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 558 SEANVREIFDK 568
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD+ +AK T GFSGAD+TEICQRACK AIR++IE +I +E+ + + NP A ME
Sbjct: 670 IAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRR-SENPEA---ME 725
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
ED D V EI AHFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRF ++
Sbjct: 726 -EDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGS 784
Query: 241 SQSGG 245
+ G
Sbjct: 785 GATTG 789
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 60/211 (28%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW---- 61
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 285
Query: 62 -------FGESEANVRDIF-------------------------------DKVTMENFRY 83
F E+E N I D +
Sbjct: 286 ESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVI 345
Query: 84 AMGKSS-PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
MG ++ P+++ RE + VP+ +IG LE ++ + +L +DVDL
Sbjct: 346 VMGATNRPNSIDPALRRFGRFDREIDIGVPD----EIGRLEVLRIHTKNMKLAEDVDLER 401
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIET 160
I+K T+G+ GADL +C A IR+ ++
Sbjct: 402 ISKDTHGYVGADLAALCTEAALQCIREKMDV 432
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT E+F A+G S+PSALRET+VEVPN++W DIGGLE VKRELQE VQ
Sbjct: 450 VTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQ 497
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 498 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 558 SEANVREIFDK 568
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 95/129 (73%), Gaps = 4/129 (3%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD+ +AK T GFSGAD+TEICQRACK AIR++IE +I ER + + NP A ME
Sbjct: 669 VAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRR-SQNPEA---ME 724
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+ DD V EI AHFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRF S
Sbjct: 725 EDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAGV 784
Query: 241 SQSGGPNSA 249
++ G +A
Sbjct: 785 GRTTGVAAA 793
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 60/211 (28%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW---- 61
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 285
Query: 62 -------FGESEANVRDIF-------------------------------DKVTMENFRY 83
F E+E N I D +
Sbjct: 286 ESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVI 345
Query: 84 AMGKSS-PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
MG ++ P+++ RE + VP+ +IG LE ++ + +L +DVDL
Sbjct: 346 VMGATNRPNSIDPALRRFGRFDREIDIGVPD----EIGRLEVLRIHTKNMKLAEDVDLER 401
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIET 160
I+K T+G+ GADL +C A IR+ ++
Sbjct: 402 ISKDTHGYVGADLAALCTEAALQCIREKMDV 432
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V+ E+F A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 450 VSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 497
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 558
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 559 SEANVREIFDK 569
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ ++VDL +A+ T GFSGAD+TEICQRACK AIR++IE +I RER K NP A M+
Sbjct: 670 IAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERER-KSRENPEA---MD 725
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+ DD V EI AHFEE+M+FARRSV+DADIRKY+ FAQTLQQSRGFG+ FRFP + ++
Sbjct: 726 EDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESGDR 785
Query: 241 SQSG 244
+ +G
Sbjct: 786 TTTG 789
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 73/251 (29%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW---- 61
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++
Sbjct: 227 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 286
Query: 62 -------FGESEANVRDIF-------------------------------DKVTMENFRY 83
F E+E N I D +
Sbjct: 287 ESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVI 346
Query: 84 AMGKSS-PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
+G ++ P+++ RE + VP+ ++G LE ++ + +L DVDL
Sbjct: 347 VIGATNRPNSIDPALRRFGRFDREIDIGVPD----EVGRLEVLRIHTKNMKLSDDVDLER 402
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVP 189
IAK T+G+ GADL +C A IR+ ++ I E E + S A
Sbjct: 403 IAKDTHGYVGADLAALCTEAALQCIREKMDV-IDLEDETIDAEVLNSMA----------- 450
Query: 190 EITRAHFEEAM 200
+T HF+ A+
Sbjct: 451 -VTNEHFQTAL 460
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT E+F+ A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 451 VTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 498
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 558
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 559 SEANVREIFDK 569
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 6/129 (4%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL +AK T GFSGAD+TEICQR+CK AIR++IE +I +ER++ A +P A E
Sbjct: 670 VAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKR-AESPEAMEEDE 728
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E + HFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRFP P
Sbjct: 729 EEIAEIKA-----GHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTG 783
Query: 241 SQSGGPNSA 249
+ P +A
Sbjct: 784 TTGAFPGAA 792
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 60/211 (28%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW---- 61
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++
Sbjct: 227 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 286
Query: 62 -------FGESEANVRDIF-------------------------------DKVTMENFRY 83
F E+E N I D +
Sbjct: 287 ESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVI 346
Query: 84 AMGKSS-PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
MG ++ P+++ RE + VP+ +IG LE ++ + +L +DVDL
Sbjct: 347 VMGATNRPNSIDPALRRFGRFDREIDIGVPD----EIGRLEVLRIHTKNMKLAEDVDLER 402
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIET 160
++K T+G+ GADL +C A IR+ ++
Sbjct: 403 VSKDTHGYVGADLAALCTEAALQCIREKMDV 433
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V+ ++F+ A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 451 VSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 498
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 68/71 (95%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVE PEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 499 YPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 558
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 559 SEANVREIFDK 569
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 95/130 (73%), Gaps = 13/130 (10%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +D+DL +AK T GFSGAD+TEICQRACK AIR++IE +I RE+ + NP +
Sbjct: 670 LSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRR-QENP------D 722
Query: 181 TEDED-DPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPN 239
+ DED D VPEI AHFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFGT FRF
Sbjct: 723 SMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADT-- 780
Query: 240 QSQSGGPNSA 249
SGG +A
Sbjct: 781 ---SGGATAA 787
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 60/211 (28%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW---- 61
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++
Sbjct: 227 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 286
Query: 62 -------FGESEANVRDIF-------------------------------DKVTMENFRY 83
F E+E N I D +
Sbjct: 287 ESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVI 346
Query: 84 AMGKSS-PSAL-----------RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNY 129
MG ++ P+++ RE + VP+ ++G LE G+ + +L ++VDL
Sbjct: 347 VMGATNRPNSIDPALRRFGRFDREIDIGVPD----EVGRLEVLGIHTKNMKLAEEVDLER 402
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIET 160
I+K T+G+ GADL +C A IR+ ++
Sbjct: 403 ISKDTHGYVGADLAALCTEAALQCIREKMDV 433
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT E+F+ A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 451 VTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 498
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 67/71 (94%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV+HPEKF KFG+ PSRGVLFYGPPG GKT+LAKA+ANEC ANFISVKGPELL+MWFGE
Sbjct: 517 YPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGE 576
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 577 SESNIRDIFDK 587
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 10/154 (6%)
Query: 95 ETIVEVPNITWEDIGGLEGV-KRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
+T+V VP D EG+ K +L++ + DVD+ +IA T+GFSGADL + QRA K
Sbjct: 662 DTLVYVP---LPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVK 718
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETEDE-DDPVPEITRAHFEEAMRFARRSVNDA 210
LAI++SI EI R++++ A ME E+E +DPVPE+TRAHFEEAM+ ARRSV+D
Sbjct: 719 LAIKESISAEIERQKQREAA--GEDVKMEDEEEGEDPVPELTRAHFEEAMKTARRSVSDV 776
Query: 211 DIRKYEMFAQTLQQSRGFGTNFRFPSNPNQSQSG 244
+IR+YE FAQ+L+ S G + FRFPS + SG
Sbjct: 777 EIRRYEAFAQSLKNSGG-SSFFRFPSANEAADSG 809
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 244 PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES 303
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 304 ESNLRKAFEE 313
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 76 VTMENFRYAMGKSSPSALRET-IVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFRYA+G S+PSALRE +VEVPN+ WEDIGGLE VKREL E VQ
Sbjct: 468 VTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQ 516
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 66/69 (95%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVE+PEKF+KFGM P++GVLFYGPPGCGKTLLAKA+A EC+ANFIS+KGPELL+MW GE
Sbjct: 499 YPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGE 558
Query: 65 SEANVRDIF 73
SE+N+RD+F
Sbjct: 559 SESNIRDLF 567
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H + + K G++P +G+L YGPPG GKTL+A+AIANE A + GPE+++ GES
Sbjct: 227 PLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGES 286
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 287 ESNLRKAFEE 296
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
KV ENFRYA+ + PS+LRET+++ PN+ W DIGGLE VK+EL+E VQ
Sbjct: 450 KVNSENFRYAIEHTDPSSLRETVIQSPNVKWSDIGGLEQVKQELRETVQ 498
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 65/70 (92%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV + EKFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+MWFGES
Sbjct: 516 PVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGES 575
Query: 66 EANVRDIFDK 75
E+NVRDIFDK
Sbjct: 576 ESNVRDIFDK 585
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL +AK T+GFSGADL + QRA KLAI+ SIE +I+RE E PA M
Sbjct: 685 VAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENET-GEAPADDVVM- 742
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
DED V ++ R H EEAM+ ARRSV+DA++R+YE +A L SRG T F+F S
Sbjct: 743 --DEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGL-TGFQFDS--AD 797
Query: 241 SQSGGPN 247
S + GP+
Sbjct: 798 SNTNGPS 804
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 243 PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES 302
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 303 ESNLRKAFEE 312
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 44/48 (91%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM+NFR+A+G S+PSALRET+VEVPN+ WEDIGGLE VKREL+E VQ
Sbjct: 467 VTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQ 514
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 64/71 (90%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV HP+++ KFG+ PS+GVLFYGPPG GKTLLAKA+A E ANFISVKGPELL+MW+GE
Sbjct: 505 YPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGE 564
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 565 SESNIRDIFDK 575
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 94/184 (51%), Gaps = 37/184 (20%)
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAM----- 179
++L IAK T GFSGADL I QRA K AI+ SIE + E EK M
Sbjct: 680 LELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGA 739
Query: 180 --ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSN 237
E E E DPVP IT+ HF EAM+ A+RSV+DA++R+YE ++Q ++ SRG +NF F
Sbjct: 740 KAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNF--- 796
Query: 238 PNQSQSGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPANESGTGGILQDEAE--D 295
N AP + T N N + NSAP SG G AE D
Sbjct: 797 ---------NDAPLGTTAT--------DNANSN-----NSAP---SGAGAAFGSNAEEDD 831
Query: 296 DLYN 299
DLY+
Sbjct: 832 DLYS 835
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 60/210 (28%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RGVL YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 233 PLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGES 292
Query: 66 EANVRDIF-----------------------DKVTMENFRYAMGK--------------- 87
E+N+R F DK E R + +
Sbjct: 293 ESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVV 352
Query: 88 ---------SSPSALR-------ETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNY 129
S ALR E + +P+ T G LE ++ + +L DVDL
Sbjct: 353 VIAATNRPNSIDPALRRFGRFDREVDIGIPDAT----GRLEVLRIHTKNMKLADDVDLEA 408
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQSIE 159
+A T+G+ GAD+ +C A IR+ ++
Sbjct: 409 LAAETHGYVGADIASLCSEAAMQQIREKMD 438
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 56 ELLTMWFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVK 115
+L+ + E +A V D VTM+NFR+A+G S+PSALRET+VE N+TW+D+GGL+ +K
Sbjct: 438 DLIDLDEDEIDAEVLDSL-GVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIK 496
Query: 116 RELQELVQ 123
EL+E V+
Sbjct: 497 EELKETVE 504
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 121 bits (304), Expect = 6e-27, Method: Composition-based stats.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+E+ + KF ++G+L YGPPGCGKTLLAKAIANEC+ANFISVKGPELLTMWFGE
Sbjct: 952 YPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGE 1011
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 1012 SEANVRDLFDK 1022
Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +DVD++ +AK T GFSGAD+T +CQ A AI+++I R++E+ + +
Sbjct: 1121 LNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFK 1180
Query: 181 TEDED--DPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
+D D DPVP +++ HF+ A + AR S+ D+ KYE F + L
Sbjct: 1181 IDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 71.2 bits (173), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++PE F+ G+ +GVL +G PG GKT +AKAIANE A + GPE+++ GES
Sbjct: 546 PLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGES 605
Query: 66 EANVRDIFDKVT 77
E +R IF K +
Sbjct: 606 EQKLRKIFKKAS 617
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 72 IFDKVTME--NFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELV 122
I +K+T++ +F++A+ +PS+LRE V++P +TW DIGG+ VK +L+E +
Sbjct: 898 ILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETI 950
Score = 32.0 bits (71), Expect = 5.1, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 115 KRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
K + +L DV+L IAK +G+ GADL ++C A I++ I
Sbjct: 707 KTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 81/274 (29%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ P+ F + G++PS+G L YGPPG GKTLLAKA+A E ANFIS+KGPE+L+ W GE
Sbjct: 485 LPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGE 544
Query: 65 SEANVRDIFDKVT-----------MENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEG 113
SE +R+IF K +++ G +S S + E IV + + I + G
Sbjct: 545 SEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNG 604
Query: 114 V-------------------------------KRELQELVQDV-----------DLNYIA 131
V +E + + V DLN IA
Sbjct: 605 VVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIA 664
Query: 132 KVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEI 191
+ T G+ GADL +C+ A A R+ NP A++ +
Sbjct: 665 QRTEGYVGADLENLCREAGMNAYRE---------------NPDATS-------------V 696
Query: 192 TRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQS 225
++ +F +A++ R SV++ I+ Y ++T+ +S
Sbjct: 697 SQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKS 730
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++HPE F + G+ P +GV+ YGPPG GKTL+A+A+ANE ANF+S+ GPE+++ ++G+
Sbjct: 208 LPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQ 267
Query: 65 SEANVRDIFDK 75
SE +R+IF K
Sbjct: 268 SEQKLREIFSK 278
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 71 DIFDK--VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
+I +K VT ++F+ A+ PS+LRE +VEVPN+ W+DIGGLE VKRE++E V+
Sbjct: 430 EILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVE 484
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 124/282 (43%), Gaps = 81/282 (28%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ PEKF + G++P GVL YGPPG GKTL+AKA+ANE ANFISV+GP+LL+ W GE
Sbjct: 480 WPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGE 539
Query: 65 SEANVRDIFDKVT-----------MENFRYAMGKSSPSALRETIV--------------E 99
SE +R F K +++ G++ + + E +V E
Sbjct: 540 SEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEE 599
Query: 100 V--------PNIT------------WEDIG--GLEGVKRELQ------ELVQDVDLNYIA 131
V P+I +G G+EG ++ L+ L DV L +A
Sbjct: 600 VMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELA 659
Query: 132 KVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEI 191
+ +G+ G+DL I + A A+R + ED DD +
Sbjct: 660 ERADGYVGSDLANIAREAAIEALR------------------------DDEDADD----V 691
Query: 192 TRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFR 233
AHF AM R ++ D + Y+ + S+G N R
Sbjct: 692 GMAHFRAAMENVRPTITDDLMEYYDQVEDQFKGSQGPNVNSR 733
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 56/70 (80%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++HP+ F K G++P +GVL +GPPG GKTLLAKA+ANE A+F S+ GPE+++ ++GE
Sbjct: 207 LPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGE 266
Query: 65 SEANVRDIFD 74
SE +R+IF+
Sbjct: 267 SEQQLREIFE 276
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V E+F+ A+ + PSA+RE +VE+P ITW+D+GGL K ++E V+
Sbjct: 432 VKREDFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVE 479
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
L DV+L+ +A T+GF GAD+ + + A A+R+ +
Sbjct: 375 LSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYL 412
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 104/215 (48%), Gaps = 68/215 (31%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE F K G++P +GVL GPPG GKTLLAKA+ANE ANF + GPE+++ + GE+
Sbjct: 198 PMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGET 257
Query: 66 EANVRDIF-----------------------DKVTMENFRYAMGK--------------- 87
E N+R IF D+ T E R + +
Sbjct: 258 EENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVV 317
Query: 88 -----SSPSAL-----------RETIVEVPNITWEDIGGLEGVKRELQ------ELVQDV 125
+ P+AL RE ++ VP+ EG K LQ L +DV
Sbjct: 318 VIGATNRPNALDPALRRPGRFDREIVIGVPD--------REGRKEILQIHTRNMPLAEDV 369
Query: 126 DLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET 160
DL+Y+A VT+GF GADL +C+ A A+R+ + +
Sbjct: 370 DLDYLADVTHGFVGADLAALCKEAAMRALRRVLPS 404
Score = 94.4 bits (233), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++ E F K G++P +GVL +GPPG GKTLLAKA+ANE ANFISVKGPE+ + W GE
Sbjct: 470 WPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGE 529
Query: 65 SEANVRDIFDK 75
SE +R+IF K
Sbjct: 530 SEKAIREIFRK 540
Score = 68.6 bits (166), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 64 ESEANVRDIFD--KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQEL 121
E+E +++ D KVTM++F+ A+ PSA+RE +VEVPN+ WEDIGGLE VK+EL+E
Sbjct: 408 EAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREA 467
Query: 122 VQ 123
V+
Sbjct: 468 VE 469
Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
L +DV+L +AK T G++GAD+ +C+ A LA+R+SI
Sbjct: 639 LAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESI 676
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 76 VTMENFRYAMGKSSP-SALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V + +F + K P S ++ET +VP++T+EDIGGL+ ++++E+++
Sbjct: 150 VRVTDFTHVELKEEPVSEIKET--KVPDVTYEDIGGLKEEVKKVREMIE 196
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 78/268 (29%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ H E F + G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GE
Sbjct: 566 WPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGE 625
Query: 65 SEANVRDIF-----------------------------DKVT---------MENFRYAMG 86
SE VR +F D+V +E R +
Sbjct: 626 SERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSSDRVVAALLNELDGIEALRNVLV 685
Query: 87 KSS--------PSALR----ETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVT 134
++ P+ +R + ++ V +E + ++ E + +DVDL+ IA+ T
Sbjct: 686 LAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKT 745
Query: 135 NGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEITRA 194
G SGA++ +CQ A +A+ + +E + EI +A
Sbjct: 746 EGCSGAEVVALCQEAGLIAMHEDLEAK----------------------------EICQA 777
Query: 195 HFEEAMRFARRSVNDADIRKYEMFAQTL 222
HF+ A+ R+++ + Y F++++
Sbjct: 778 HFKTALLALRKAITRDMLEYYASFSESV 805
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
I P ++PE F F + P RGVL YGPPG GKT++ +A+A E A ++ GP ++ +
Sbjct: 294 IVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKY 353
Query: 62 FGESEANVRDIFD 74
GE+E+ +R IF+
Sbjct: 354 LGETESRLRKIFE 366
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 71 DIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
DIF V M++ +A+ SA+RE ++E PN+ W DIGG E VK++L+E V+
Sbjct: 513 DIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVE 565
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +P+K+ G+ GVL YGPPGCGKTLLAKAIA+ECQANFISVKGPELL + GES
Sbjct: 585 PIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGES 644
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 645 ERAVRQVFQR 654
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+ HPE + G++P RG+L +GP GCGKTLLAKAIA E + ++ E+ + GE
Sbjct: 234 YPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGE 293
Query: 65 SEANVRDIF 73
SEA VR +F
Sbjct: 294 SEARVRTLF 302
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ M +F+ A+ K P+A RE +PN+TW+D+G L GV+ EL
Sbjct: 536 IEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREEL 578
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+++PE F ++P RG+L +GPPG GKTLLAKA+ANE ANFISVKGPELL+ W GE
Sbjct: 473 WPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGE 532
Query: 65 SEANVRDIFDK 75
SE +VR++F K
Sbjct: 533 SEKHVREMFRK 543
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++HPE F + G++P +GVL YGPPG GKTL+AKA+ANE A+FI + GPE+++ ++GE
Sbjct: 200 LPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGE 259
Query: 65 SEANVRDIFDK 75
SE +R+IF++
Sbjct: 260 SEQRLREIFEE 270
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
KVT E+F A+ PSA+RE +VEVPN+ WEDIGGLE K+EL E V+
Sbjct: 424 KVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVE 472
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L DV++ +A+ T G+SGAD+ +C+ A LAIR+ I+ + RE K A
Sbjct: 642 LADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL------ 695
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+IT+ HFEEA++ R S+ D+ KYE + +
Sbjct: 696 ---------KITKKHFEEALKKVRPSLTKEDVEKYEKLIEDFHR 730
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
L +DVDL +A++TNGF GADL +C+ A A+R+ +
Sbjct: 368 LAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVL 405
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 54/217 (24%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HPE F++ G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVR----------------DIFDKVTMEN-FRYAMGKSSPSALRETIVEVPNI-TWE 106
SE VR D D + +E G + L + + E+ I +
Sbjct: 705 SERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLK 764
Query: 107 DIGGLEGV-----------------------------KRELQEL-------VQDVDLNYI 130
D+ L +RE+ +L +VDL+ +
Sbjct: 765 DVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDEL 824
Query: 131 AKVTNGFSGADLTEICQRACKLAIRQSIETEIRRERE 167
T+ +SGA++ +C+ A LA+ + I+ + +R
Sbjct: 825 ILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRH 861
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
I P++ PE F +G+ RGVL YGPPG GKT++A+A+ANE A + GPE+++ +
Sbjct: 368 IIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKF 427
Query: 62 FGESEANVRDIFDKVTMEN 80
+GE+EA +R IF + T+ +
Sbjct: 428 YGETEAKLRQIFAEATLRH 446
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+++F AM PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVE 644
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HP+ F + G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVRDIFDK 75
SE VR+IF K
Sbjct: 705 SERAVREIFRK 715
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
I P++ PE F +G+ RG+L YGPPG GKT++A+A+ANE A + GPE+++ +
Sbjct: 368 IIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKF 427
Query: 62 FGESEANVRDIFDKVTMEN 80
+GE+EA +R IF + T+ +
Sbjct: 428 YGETEARLRQIFAEATLRH 446
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+ +F M PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVE 644
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRERE 167
+VDL+ + T+ +SGA++ +C+ A LA+ ++I+ + +R
Sbjct: 818 EVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKRH 861
>sp|Q7SGP2|PEX6_NEUCR Peroxisomal biogenesis factor 6 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pex-6 PE=3 SV=1
Length = 1381
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E PE F K GM+ G+LFYGPPG GKTLLAKAIA E NF SVKGPELL M+ GES
Sbjct: 1010 PLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGES 1068
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 1069 EANVRRVFQR 1078
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQ 123
++PN+TW+D+GGL VK + E +Q
Sbjct: 984 KIPNVTWDDVGGLGNVKDAITETIQ 1008
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E PE F K GM+ G+LFYGPPG GKTLLAKAIA E NF SVKGPELL M+ GES
Sbjct: 1013 PLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGES 1071
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 1072 EANVRRVFQR 1081
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQ 123
++PN+TW+D+GGL VK + E +Q
Sbjct: 987 KIPNVTWDDVGGLNNVKDAVTETIQ 1011
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 69/276 (25%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE + G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL
Sbjct: 506 MAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNK 565
Query: 61 WFGESEANVRDI------------------------------------------FDKVTM 78
+ GESE VR + D ++
Sbjct: 566 YVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSD 625
Query: 79 ENFRYAMGKSS------PSALR------ETIVEVPNITWEDIGGLEGVKRELQELVQDVD 126
+ Y + ++ P+ LR +V++P+ E + L+ + ++ L ++V+
Sbjct: 626 RSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPD-AHERVEILKTLTKQ-TPLHEEVN 683
Query: 127 LNYIAK--VTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDE 184
L+ + + + FSGADL + + A A+R ++ +I ++ + A
Sbjct: 684 LDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSAL--------- 734
Query: 185 DDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
+P+ +T A FE A + + SV+D D +KY+ A+
Sbjct: 735 -EPI-RVTNADFELAFKNIKPSVSDRDRQKYQRLAK 768
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
+ P++HPE + G+ P RGVL +GPPGCGKT+LA A+ANE FIS+ P +++
Sbjct: 189 LVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGM 248
Query: 62 FGESEANVRDIFDK 75
GESE VR++F++
Sbjct: 249 SGESEKKVREVFEE 262
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 79 ENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ 119
++F A+ K PS+ RE VP ++W +IG L+ ++ ELQ
Sbjct: 465 QDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQ 505
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+E PE F K GM+ G+LFYGPPG GKTLLAKAIA E NF SVKGPELL M+ GE
Sbjct: 1048 LPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGE 1106
Query: 65 SEANVRDIFDK 75
SEANVR +F +
Sbjct: 1107 SEANVRRVFQR 1117
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQ 123
++PN+ W+D+GGL VK L E +Q
Sbjct: 1023 KIPNVGWDDVGGLTNVKDALVETIQ 1047
>sp|Q9UVU5|PEX6_PICAN Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1
Length = 1135
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F K GM+ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 832 PLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGES 890
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 891 EANVRRVFQK 900
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 19/24 (79%)
Query: 100 VPNITWEDIGGLEGVKRELQELVQ 123
+P++ WED+GGL+ VK E+ + ++
Sbjct: 807 IPDVKWEDVGGLDVVKDEILDTIE 830
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 79/289 (27%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE + K G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 547 MAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 606
Query: 61 WFGESEANVRDI-------------FDKVT---------------------------MEN 80
+ GESE ++R + FD++ + +
Sbjct: 607 YVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLND 666
Query: 81 FR--YAMGKSS------PSALR------ETIVEVPNITWEDIGGLEGV-KRELQELVQDV 125
R + +G ++ P+ LR +E+PN T E + ++ + K L DV
Sbjct: 667 RRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPN-TEEKLDIIKTLTKSHGTPLSSDV 725
Query: 126 DLNYIAK--VTNGFSGADLTEICQRACKLAIRQS----------IETEIRREREKLAGNP 173
D I + N FSGADL + + + LA+++ ++ ++ +E E L+
Sbjct: 726 DFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGV 785
Query: 174 AASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
+ + +T + F A+R + SV+D D KY+ + +
Sbjct: 786 SGEEII-----------VTMSDFRSALRKIKPSVSDKDRLKYDRLNKKM 823
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 65/217 (29%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ HPE FL G++P RGVL +GPPGCGKT +A A+A E Q FIS+ P +++ GE
Sbjct: 223 LPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGE 282
Query: 65 SEANVRDIF-------------------------------------------DKVTMENF 81
SE +RD+F D++TME
Sbjct: 283 SEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKT 342
Query: 82 R----YAMGKSS-PSAL-----------RETIVEVPNITWEDIGGLEGVKRELQELVQD- 124
+G ++ P +L RE + VPN ++ L +K+ L D
Sbjct: 343 NGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPN----EVSRLHILKKMSDNLKIDG 398
Query: 125 -VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET 160
+D +AK+T GF GADL + A AI++ +T
Sbjct: 399 AIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQT 435
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ E+F A+ P+A RE VP++TW ++G L+ V+ EL
Sbjct: 503 IKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLEL 545
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 69/275 (25%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F + G++P GVL YGPPG GKTLLAKA+A E F+S+KGPELL M+ GES
Sbjct: 674 PLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGES 732
Query: 66 EANVRDI--------------------------------------------FDKVTMENF 81
EANVR++ D ++ +N
Sbjct: 733 EANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNN 792
Query: 82 RYA--MGKSS------PSALR----ETIVEV-PNITWEDIGGLEGVKRELQELVQDVDLN 128
+Y +G ++ PS LR + +V + N + E + + +L + +DLN
Sbjct: 793 KYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLN 852
Query: 129 YIAKVTN-GFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME-----TE 182
IAK + F+GAD+ +C A AI++ E + L + E E
Sbjct: 853 EIAKNCHPNFTGADMYALCSDAVLSAIKRK-----TNEIDLLIQASGTDLSTEEFFKRNE 907
Query: 183 DEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEM 217
++D IT+ F +++ R S+++ ++ +YEM
Sbjct: 908 NQDSLELRITKEDFLTSLKKLRPSISEQELHRYEM 942
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 96 TIVEVPNITWEDIGGLEGVKRELQELVQ 123
TI VP + W+DIGGLE K L++ +Q
Sbjct: 645 TIFTVPKVNWDDIGGLEEAKTVLRDTLQ 672
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H + F G++ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GES
Sbjct: 677 PLLHKDLF-SSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 735
Query: 66 EANVRDIFDK 75
E NVRDIF+K
Sbjct: 736 EKNVRDIFEK 745
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQ 123
+VPN+ W+D+GGLE VK + + VQ
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQ 675
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 111 LEGVKRELQELVQDVDLNYIAK-VTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L+ + R+ + L +DV L +AK + F+GAD+ +C A A ++ +
Sbjct: 838 LKALTRKFK-LSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKV----------- 885
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQ 223
+ + S M TE++D + F +AM S++ +++KYEM Q
Sbjct: 886 --SKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQ 937
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F GM+ G+LFYGPPG GKTLLAKAIA+ NF SVKGPELL M+ GES
Sbjct: 721 PLKHPELF-SSGMKKRSGILFYGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGES 779
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 780 EANVRRVFQK 789
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 20/24 (83%)
Query: 99 EVPNITWEDIGGLEGVKRELQELV 122
++PN+TW+DIGG++ VK E+ + +
Sbjct: 695 KIPNVTWDDIGGMDVVKGEIMDTI 718
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 61
I +P+ HPE F + G+ P +G+L YGPPG GKTLLA+A+ANE A FI+V GPE+++ +
Sbjct: 227 IVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKF 286
Query: 62 FGESEANVRDIF 73
+GESE +R+IF
Sbjct: 287 YGESEQRIREIF 298
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ PE F K G+ P +G+L +GPPG GKT+LAKA+A E ANFI+V+GPE+L+ W GE
Sbjct: 505 WPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGE 564
Query: 65 SEANVRDIFDK 75
SE +R+IF K
Sbjct: 565 SEKAIREIFRK 575
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
KV+M +F A+ PS LRE VEVP + W DIGGL+ VK++L+E V+
Sbjct: 456 KVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVE 504
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +DV L IA+ G++GADL + + A A+R ++ R++ GN
Sbjct: 674 LAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRDECKGNMECYQKHI 733
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQS 225
E + ++++ FE+A+ + S+ ADI++YE F++ L+++
Sbjct: 734 KECMNKTSFKVSKEDFEKALNVVKASLTQADIQRYERFSKELKRA 778
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIE 159
+ DVDL+ +A++T G++GADL + + A A+R+ ++
Sbjct: 398 ITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVD 436
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 80 NFRYAMGKSSPSA----LRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
N+ Y G ++ ++E+ + P ++WEDIG LE K++++E+V+
Sbjct: 182 NYVYVTGSTNIEIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVE 229
>sp|Q6BS73|PEX6_DEBHA Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PEX6 PE=3 SV=2
Length = 1198
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 858 PLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGES 916
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 917 EANVRRVFQK 926
Score = 34.7 bits (78), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 100 VPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGF 137
+P++ WEDIGGL+ VK E+ + + D+ L + +NG
Sbjct: 833 IPDVKWEDIGGLDLVKDEIMDTI-DMPLKHPELFSNGL 869
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 95.5 bits (236), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHP F G+ G+L +GPPG GKTLLAKAIA EC NF+SVKGPEL+ M+ GES
Sbjct: 938 PLEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGES 996
Query: 66 EANVRDIFDK 75
E N+R+IF+K
Sbjct: 997 EKNIREIFNK 1006
Score = 35.8 bits (81), Expect = 0.37, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQ 123
++PN++W+D+GGL VK E+ + +Q
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQ 936
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F GM+ G+LFYGPPG GKTL+AKAIA NF SVKGPELL M+ GES
Sbjct: 751 PLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGES 809
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 810 EANVRRVFQK 819
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 99 EVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNG 136
++PN+TW+DIGG++ VK E+ + + D+ L + T+G
Sbjct: 725 QIPNVTWDDIGGIDFVKGEILDTI-DMPLKHPELFTSG 761
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 94.7 bits (234), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 737 PLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGES 795
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 796 EANVRRVFQK 805
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 100 VPNITWEDIGGLEGVKRELQELV 122
+PN+TW+D+GGL VK + E +
Sbjct: 712 IPNVTWDDVGGLSSVKDAIMETI 734
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 52/75 (69%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M PV +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M
Sbjct: 595 MAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNM 654
Query: 61 WFGESEANVRDIFDK 75
+ GESE VR +F +
Sbjct: 655 YVGESERAVRQVFQR 669
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 284 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 343
Query: 67 ANVRDIFDKVT 77
+R++F++
Sbjct: 344 QKLRELFEQAV 354
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 551 IELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 593
Score = 34.7 bits (78), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 21/103 (20%)
Query: 124 DVDLNYIA--KVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET 181
DV+L IA + ++GADL+ + + A A+RQ E+ R++ +GN
Sbjct: 773 DVNLEAIAGDLRCDCYTGADLSALVREASICALRQ----EMARQK---SGNEKGEL---- 821
Query: 182 EDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+++ HFEEA + R S++ D YE ++L +
Sbjct: 822 --------KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 856
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L Q D ++A +T GF GADL +C+ A
Sbjct: 428 REICLGIPDEASRERI--LQTLCRKLR-LPQAFDFCHLAHLTPGFVGADLMALCREAAMC 484
Query: 153 AIRQSI 158
A+ + +
Sbjct: 485 AVNRVL 490
>sp|P33289|PEX6_PICPA Peroxisomal biogenesis factor 6 OS=Komagataella pastoris GN=PEX6
PE=3 SV=1
Length = 1165
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 838 PMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGES 896
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 897 EANVRKVFQR 906
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 17/78 (21%)
Query: 76 VTMENFRYAMG---KSSPSALRETI-------------VEVPNITWEDIGGLEGVKRELQ 119
V+ EN Y+ G K +P + ++I +PN+ WED+GGL+ VK E+
Sbjct: 773 VSFENMVYSSGGYIKFTPEDVEKSINTARNKFSDSIGAPRIPNVKWEDVGGLDVVKDEIL 832
Query: 120 ELVQDVDLNYIAKVTNGF 137
+ + D+ + + +NG
Sbjct: 833 DTI-DMPMKHPELFSNGI 849
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M PV +P++F G+ G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M
Sbjct: 594 MAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNM 653
Query: 61 WFGESEANVRDIFDK 75
+ GESE VR +F +
Sbjct: 654 YVGESERAVRQVFQR 668
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 283 MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 342
Query: 67 ANVRDIFDK 75
+R++FD+
Sbjct: 343 QKLRELFDQ 351
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ + PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 550 IELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDEL 592
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 21/106 (19%)
Query: 121 LVQDVDLNYIAK--VTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAA 178
L +DV+L IA N ++GADLT + + A A+RQ I + N +
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQ---------KNGVGAGE 819
Query: 179 METEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+ +++ HFE+A + + S++ D YE ++L Q
Sbjct: 820 L----------KVSHKHFEDAFKKVKPSISIKDQVMYEALQRSLSQ 855
>sp|Q9YAC7|PAN_AERPE Proteasome-activating nucleotidase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pan
PE=3 SV=1
Length = 409
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 55/208 (26%)
Query: 4 TYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
P+++P F + G+ P +GVL +GPPG GKTLLAKA+A E +A FI V G EL+ + G
Sbjct: 156 VLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIG 215
Query: 64 ESEANVRDIF-------------DKV-TMENFRYAMGKS--------------------- 88
E VR+IF D++ + + R +G S
Sbjct: 216 EGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDP 275
Query: 89 ----------------SPSALR----ETIVEVPNITWEDIGGLEGVKRELQELVQDVDLN 128
P+ LR + I+EVP + + G+ ++ DVDL
Sbjct: 276 LDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLE 335
Query: 129 YIAKVTNGFSGADLTEICQRACKLAIRQ 156
IAK+T GFSGADL + A AIR+
Sbjct: 336 AIAKLTEGFSGADLKAVVVEAGYNAIRR 363
>sp|Q9LET7|CI111_ARATH Calmodulin-interacting protein 111 OS=Arabidopsis thaliana
GN=CIP111 PE=1 SV=1
Length = 1022
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P +H + F + G +P G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL + W GE
Sbjct: 742 WPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGE 801
Query: 65 SEANVRDIFDK 75
SE VR +F K
Sbjct: 802 SEKAVRSLFAK 812
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 16 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 73
G++P++GVL +GPPG GKT LA+ A NF SV GPE+++ + GESE + ++F
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVF 470
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V E+F A K PSA+RE I+EVP + WED+GG VK +L E V+
Sbjct: 694 VGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVE 741
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE 161
D+ L +A +T G++GAD++ IC+ A A+ +S+E E
Sbjct: 915 DICLKELASITKGYTGADISLICREAAIAALEESLEME 952
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 94 RETIVEVPNITWE-DIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + VP+ T DI L + R ++ + ++ + +A T+GF GADL+ +C A +
Sbjct: 545 REIEIGVPSSTQRSDI--LHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFV 602
Query: 153 AIRQSIE 159
+R+ ++
Sbjct: 603 CLRRHLD 609
>sp|Q74Z13|PEX6_ASHGO Peroxisomal biogenesis factor 6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX6
PE=3 SV=1
Length = 1021
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F GM+ G+LFYGPPG GKTLLAKA+A NF SVKGPELL M+ GES
Sbjct: 742 PLKFPELFAS-GMKKRSGILFYGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGES 800
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 801 EANVRRVFQR 810
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 99 EVPNITWEDIGGLEGVKRELQELV 122
++PN+ WEDIGGLE VK E+ + +
Sbjct: 716 KIPNVFWEDIGGLEMVKGEILDTI 739
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++P F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 738 PLKYPHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGES 796
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 797 EANVRRVFQK 806
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 21/24 (87%)
Query: 100 VPNITWEDIGGLEGVKRELQELVQ 123
+PN+ W+D+GG+EGVK+++ + ++
Sbjct: 713 IPNVGWDDVGGMEGVKKDILDTIE 736
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,423,397
Number of Sequences: 539616
Number of extensions: 5338230
Number of successful extensions: 21561
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 18511
Number of HSP's gapped (non-prelim): 3398
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)