Your job contains 1 sequence.
>psy13773
MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM
WFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQE
LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME
TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ
SQSGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLYN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13773
(299 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 473 1.6e-83 3
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 460 2.7e-80 3
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 460 2.7e-80 3
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 460 2.7e-80 3
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 460 2.7e-80 3
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 460 2.7e-80 3
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 460 3.4e-80 3
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 456 3.6e-80 2
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 458 4.7e-80 3
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 460 5.5e-80 3
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 456 6.4e-80 3
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 452 8.4e-80 3
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 448 6.1e-79 3
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 448 6.1e-79 3
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 456 1.1e-78 2
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 425 1.7e-76 2
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 425 1.7e-76 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 417 1.3e-75 2
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 417 1.3e-75 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 416 3.9e-74 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 367 1.6e-68 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 369 1.7e-68 2
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 366 2.5e-68 2
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 366 8.3e-68 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 341 3.3e-62 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 315 6.4e-61 3
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 308 1.7e-60 3
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 308 1.7e-60 3
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 347 1.2e-58 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 308 1.9e-51 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 348 4.0e-42 2
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 348 4.0e-42 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 300 6.3e-42 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 300 6.3e-42 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 240 3.0e-27 3
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 245 3.7e-27 3
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 253 7.1e-27 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 236 5.9e-26 3
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 227 7.2e-26 3
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 238 7.8e-26 2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 221 3.6e-25 3
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 236 3.7e-25 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 236 3.7e-25 2
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 237 3.8e-25 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 228 3.8e-25 3
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 231 5.8e-25 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 218 9.0e-25 3
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 222 1.1e-24 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 223 1.3e-24 3
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 231 1.7e-24 2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 241 2.6e-24 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 241 3.1e-24 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 224 3.7e-24 3
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 251 4.8e-24 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 201 6.9e-24 3
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 227 8.4e-24 3
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 224 1.4e-23 3
ASPGD|ASPL0000034610 - symbol:pexF species:162425 "Emeric... 237 2.1e-23 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 224 2.8e-23 3
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 231 3.4e-23 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 233 5.0e-23 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 252 8.0e-23 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 237 2.9e-22 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 216 3.0e-22 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 227 4.6e-22 3
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 242 8.3e-22 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 216 2.8e-21 3
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 212 3.1e-21 3
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 212 3.1e-21 3
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes... 237 3.5e-21 2
GENEDB_PFALCIPARUM|MAL8P1.92 - symbol:MAL8P1.92 "ATPase, ... 218 1.2e-20 3
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 196 1.3e-20 3
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 199 5.2e-20 2
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 211 1.1e-19 3
CGD|CAL0005974 - symbol:PEX6 species:5476 "Candida albica... 226 2.2e-19 2
UNIPROTKB|Q59ZE6 - symbol:PEX6 "Likely peroxisomal biogen... 226 2.2e-19 2
TAIR|locus:2034230 - symbol:ERH3 "ECTOPIC ROOT HAIR 3" sp... 167 6.3e-19 2
UNIPROTKB|F1S7T6 - symbol:KATNA1 "Uncharacterized protein... 152 8.7e-19 2
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 216 1.0e-18 3
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 201 1.9e-18 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 212 1.9e-18 4
TAIR|locus:4010714050 - symbol:AT5G52882 species:3702 "Ar... 186 2.0e-18 2
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 168 2.2e-18 3
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 218 2.9e-18 2
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 232 4.1e-18 1
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 211 4.4e-18 2
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 232 5.1e-18 1
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 218 5.2e-18 2
UNIPROTKB|Q1HGK7 - symbol:KATNA1 "Katanin p60 ATPase-cont... 155 5.7e-18 2
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 169 6.0e-18 3
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 224 6.7e-18 2
UNIPROTKB|E1BH39 - symbol:KATNA1 "Uncharacterized protein... 155 9.2e-18 2
UNIPROTKB|Q4R407 - symbol:KATNA1 "Katanin p60 ATPase-cont... 155 9.2e-18 2
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 209 1.0e-17 2
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 209 1.0e-17 2
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 193 1.5e-17 2
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 193 1.5e-17 2
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 193 1.5e-17 2
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 193 1.5e-17 2
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 193 1.5e-17 2
WARNING: Descriptions of 529 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 473 (171.6 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 98/138 (71%), Positives = 110/138 (79%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L ++VDL YIAKVT GFSGADLTEICQRACKLAIRQ+IE EIRRE+E+ A N ++AM+
Sbjct: 663 LAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKER-AENQ--NSAMD 719
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
DEDDPVPEIT AHFEEAM+FARRSV+D DIRKYEMFAQTLQQSRGFG NFRFP
Sbjct: 720 M-DEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFPGQTGN 778
Query: 241 SQSGGPNSAPANESGTGG 258
+ SG N+ P N G G
Sbjct: 779 T-SGSGNNLPVNSPGDNG 795
Score = 382 (139.5 bits), Expect = 4.3e-82, Sum P(2) = 4.3e-82
Identities = 70/71 (98%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 492 YPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 551
Query: 65 SEANVRDIFDK 75
SEANVRDIFDK
Sbjct: 552 SEANVRDIFDK 562
Score = 214 (80.4 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFRYAM KSSPSALRET+VEVPN TW DIGGLE VK+ELQELVQ
Sbjct: 444 VTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQ 491
Score = 201 (75.8 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 220 PLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 279
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 280 ESNLRKAFEE 289
Score = 94 (38.1 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE ++ + +L DVDL IA ++G GADL +C A
Sbjct: 362 REIDIGIPDAT----GRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAAL 417
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ ++ I E +K+ AS A+ E+
Sbjct: 418 QQIREKMDL-IDLEDDKIDAEVLASLAVTMEN 448
Score = 49 (22.3 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLYN 299
FP + SG N+ P N G D +DDLY+
Sbjct: 772 FPGQTGNT-SGSGNNLPVNSPG------DNGDDDLYS 801
Score = 38 (18.4 bits), Expect = 7.3e-46, Sum P(2) = 7.3e-46
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 188 REEEEESLNAVGYDDIGGCRKQLAQIKEMVE 218
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 460 (167.0 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 460 (167.0 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGNVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 460 (167.0 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 460 (167.0 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 460 (167.0 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGNVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 460 (167.0 bits), Expect = 3.4e-80, Sum P(3) = 3.4e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 682 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 737
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 738 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 794
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 795 ---GGAGPSQGSGGGTGG 809
Score = 368 (134.6 bits), Expect = 4.7e-79, Sum P(2) = 4.7e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 511 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 570
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 571 SEANVREIFDK 581
Score = 200 (75.5 bits), Expect = 3.4e-80, Sum P(3) = 3.4e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 239 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 298
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 299 ESNLRKAFEE 308
Score = 199 (75.1 bits), Expect = 3.4e-80, Sum P(3) = 3.4e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 463 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 510
Score = 98 (39.6 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 381 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 436
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 437 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 467
Score = 57 (25.1 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 789 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 821
Score = 38 (18.4 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 207 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 237
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 456 (165.6 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 98/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 398 VAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 453
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 454 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 510
Query: 241 SQSGGPNSAPANESGTGG 258
GG + G+GG
Sbjct: 511 ---GGAGPSQGTGGGSGG 525
Score = 368 (134.6 bits), Expect = 3.6e-80, Sum P(2) = 3.6e-80
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 227 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 286
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 287 SEANVREIFDK 297
Score = 199 (75.1 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 179 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 226
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL + T+G GADL +C A
Sbjct: 97 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVGNETHGHVGADLAALCSEAAL 152
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 153 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 183
Score = 58 (25.5 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 54 GPELLTMWFGESEANVRDIFDK 75
GPE+++ GESE+N+R F++
Sbjct: 3 GPEIMSKLAGESESNLRKAFEE 24
Score = 57 (25.1 bits), Expect = 4.8e-38, Sum P(2) = 4.8e-38
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
FPS NQ GP+ SG G + ++ +DDLY
Sbjct: 505 FPSG-NQG-GAGPSQGTGGGSG-GNVYSEDNDDDLY 537
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 458 (166.3 bits), Expect = 4.7e-80, Sum P(3) = 4.7e-80
Identities = 99/135 (73%), Positives = 110/135 (81%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME E
Sbjct: 671 DVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---MEVE- 725
Query: 184 EDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQSQS 243
EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 726 EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ--- 780
Query: 244 GGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 781 GGAGPSQGSGGGTGG 795
Score = 368 (134.6 bits), Expect = 6.8e-79, Sum P(2) = 6.8e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 4.7e-80, Sum P(3) = 4.7e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 4.7e-80, Sum P(3) = 4.7e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 98 (39.6 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 775 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 807
Score = 38 (18.4 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 460 (167.0 bits), Expect = 5.5e-80, Sum P(3) = 5.5e-80
Identities = 99/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 778
Query: 241 SQSGGPNSAPANESGTGG 258
GG + + GTGG
Sbjct: 779 ---GGAGPSQGSGGGTGG 793
Score = 368 (134.6 bits), Expect = 4.0e-79, Sum P(2) = 4.0e-79
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 5.5e-80, Sum P(3) = 5.5e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 196 (74.1 bits), Expect = 5.5e-80, Sum P(3) = 5.5e-80
Identities = 36/48 (75%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQ+LVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQ 494
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 57 (25.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGG-ILQDEAEDDLY 298
FPS NQ GG + + GTGG + ++ +DDLY
Sbjct: 773 FPSG-NQ---GGAGPSQGSGGGTGGSVYTEDNDDDLY 805
Score = 38 (18.4 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 456 (165.6 bits), Expect = 6.4e-80, Sum P(3) = 6.4e-80
Identities = 98/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 670 VAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 725
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 726 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 782
Query: 241 SQSGGPNSAPANESGTGG 258
GG + G+GG
Sbjct: 783 ---GGAGPSQGTGGGSGG 797
Score = 368 (134.6 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 499 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 558
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 559 SEANVREIFDK 569
Score = 201 (75.8 bits), Expect = 6.4e-80, Sum P(3) = 6.4e-80
Identities = 37/75 (49%), Positives = 53/75 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDKVTMEN 80
E+N+R F++ T +N
Sbjct: 283 ESNLRKAFEE-TEKN 296
Score = 199 (75.1 bits), Expect = 6.4e-80, Sum P(3) = 6.4e-80
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 451 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 498
Score = 98 (39.6 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 369 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 424
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 425 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 455
Score = 57 (25.1 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
FPS NQ GP+ SG G + ++ +DDLY
Sbjct: 777 FPSG-NQG-GAGPSQGTGGGSG-GNVYSEDNDDDLY 809
Score = 38 (18.4 bits), Expect = 6.4e-44, Sum P(2) = 6.4e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 452 (164.2 bits), Expect = 8.4e-80, Sum P(3) = 8.4e-80
Identities = 99/136 (72%), Positives = 112/136 (82%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETE 182
+DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE EIRRERE+ NP+A ME E
Sbjct: 668 KDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT-NPSA---MEVE 723
Query: 183 DEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQSQ 242
EDDPVPEI + HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS+ NQ
Sbjct: 724 -EDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSS-NQGG 780
Query: 243 SGGPNSAPANESGTGG 258
SG P+ SG GG
Sbjct: 781 SG-PSQG---SSGGGG 792
Score = 368 (134.6 bits), Expect = 3.1e-78, Sum P(2) = 3.1e-78
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 203 (76.5 bits), Expect = 8.4e-80, Sum P(3) = 8.4e-80
Identities = 38/48 (79%), Positives = 46/48 (95%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVPNITWEDIGGL+ VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQ 494
Score = 200 (75.5 bits), Expect = 8.4e-80, Sum P(3) = 8.4e-80
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 98 (39.6 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 58 (25.5 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
FPS+ NQ SG P+ + G G + ++ +DDLY
Sbjct: 773 FPSS-NQGGSG-PSQGSSGGGG-GNVFNEDNDDDLY 805
Score = 40 (19.1 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG+ +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGVRKQLAQIKEMVE 221
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 448 (162.8 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 97/139 (69%), Positives = 113/139 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD++++AK+TNGFSGADLTEICQRACKLAIR+SIE EIRRER++ NP+A ME
Sbjct: 666 VAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFP+
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPAG--- 776
Query: 241 SQSG-GPNSAPANESGTGG 258
QSG GP+ P G+GG
Sbjct: 777 GQSGAGPS--PGAGGGSGG 793
Score = 368 (134.6 bits), Expect = 8.6e-78, Sum P(2) = 8.6e-78
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 95 (38.5 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDST----GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 52 (23.4 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 267 PNQSQSG-GPNSAPANESGTGGILQDEAEDDLY 298
P QSG GP+ P G+GG E +DDLY
Sbjct: 774 PAGGQSGAGPS--PGAGGGSGGGHFTEEDDDLY 804
Score = 38 (18.4 bits), Expect = 4.7e-43, Sum P(2) = 4.7e-43
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 448 (162.8 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 96/139 (69%), Positives = 110/139 (79%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE EIRRERE+ NP+A ME
Sbjct: 666 VAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQT-NPSA---ME 721
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSN--- 237
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFP+
Sbjct: 722 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPAGGQG 779
Query: 238 ---PNQSQSGGPNSAPANE 253
P+Q GG + NE
Sbjct: 780 GAGPSQGAGGGSGGSHFNE 798
Score = 368 (134.6 bits), Expect = 8.6e-78, Sum P(2) = 8.6e-78
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 495 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 554
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 555 SEANVREIFDK 565
Score = 200 (75.5 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES 282
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 283 ESNLRKAFEE 292
Score = 199 (75.1 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 447 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Score = 95 (38.5 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 365 REVDIGIPDST----GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAAL 420
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 421 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 451
Score = 51 (23.0 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 267 PNQSQSG-GPNSAPANESGTGGILQDEAEDDLY 298
P Q G GP+ G+GG +E EDDLY
Sbjct: 774 PAGGQGGAGPSQGAGG--GSGGSHFNEEEDDLY 804
Score = 38 (18.4 bits), Expect = 4.7e-43, Sum P(2) = 4.7e-43
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 456 (165.6 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 98/138 (71%), Positives = 112/138 (81%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL+++AK+TNGFSGADLTEICQRACKLAIR+SIE+EIRRERE+ NP+A ME
Sbjct: 664 VAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQT-NPSA---ME 719
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
E EDDPVPEI R HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG+ FRFPS NQ
Sbjct: 720 VE-EDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFPSG-NQ 776
Query: 241 SQSGGPNSAPANESGTGG 258
GG + G+GG
Sbjct: 777 ---GGAGPSQGTGGGSGG 791
Score = 368 (134.6 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHP+KFLKFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 493 YPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 552
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 553 SEANVREIFDK 563
Score = 199 (75.1 bits), Expect = 1.2e-77, Sum P(3) = 1.2e-77
Identities = 37/48 (77%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++FR+A+ +S+PSALRET+VEVP +TWEDIGGLE VKRELQELVQ
Sbjct: 445 VTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 492
Score = 179 (68.1 bits), Expect = 1.2e-77, Sum P(3) = 1.2e-77
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GE
Sbjct: 223 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEG 282
Query: 66 EANVR 70
E+ R
Sbjct: 283 ESACR 287
Score = 98 (39.6 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL +A T+G GADL +C A
Sbjct: 363 REVDIGIPDAT----GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL 418
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ ++ I E E + S A+ +D
Sbjct: 419 QAIRKKMDL-IDLEDETIDAEVMNSLAVTMDD 449
Score = 57 (25.1 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
FPS NQ GP+ SG G + ++ +DDLY
Sbjct: 771 FPSG-NQG-GAGPSQGTGGGSG-GNVYSEDNDDDLY 803
Score = 38 (18.4 bits), Expect = 6.0e-44, Sum P(2) = 6.0e-44
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N + ++DIGG +++E+V+
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVE 221
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 425 (154.7 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 92/152 (60%), Positives = 110/152 (72%)
Query: 106 EDIGGLEGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIR 163
++ L+ K L++ L D+DLN++AK T GFSGADLTEICQRACKLAIR+SIE EIR
Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713
Query: 164 REREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQ 223
+E+E+ + ME E D PVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQ
Sbjct: 714 QEKERQDRSARGEELMEDELAD-PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 772
Query: 224 QSRGFGTNFRFPSN-PNQSQS-GGPNSAPANE 253
QSRGFG NF+FP P+ Q GG + N+
Sbjct: 773 QSRGFGNNFKFPGEAPSAGQPVGGNGGSGGND 804
Score = 380 (138.8 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 68/71 (95%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 500 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 559
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 560 SEANVRDVFDK 570
Score = 210 (79.0 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFR+AMGKSSPSALRE +VE PN TW DIGGL+ VKRELQELVQ
Sbjct: 452 VTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Score = 197 (74.4 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 228 PLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGES 287
Query: 66 EANVRDIF 73
E+N+R F
Sbjct: 288 ESNLRKAF 295
Score = 89 (36.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ +G LE + + +L +DVDL +A +GF GADL +C A
Sbjct: 370 REIDIGIPDA----VGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAI 425
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ +E I E + + S A+ E+
Sbjct: 426 QQIREKMEL-IDLEDDTIDAEVLNSLAVTMEN 456
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 425 (154.7 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 92/152 (60%), Positives = 110/152 (72%)
Query: 106 EDIGGLEGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIR 163
++ L+ K L++ L D+DLN++AK T GFSGADLTEICQRACKLAIR+SIE EIR
Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713
Query: 164 REREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQ 223
+E+E+ + ME E D PVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQ
Sbjct: 714 QEKERQDRSARGEELMEDELAD-PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQ 772
Query: 224 QSRGFGTNFRFPSN-PNQSQS-GGPNSAPANE 253
QSRGFG NF+FP P+ Q GG + N+
Sbjct: 773 QSRGFGNNFKFPGEAPSAGQPVGGNGGSGGND 804
Score = 380 (138.8 bits), Expect = 1.7e-76, Sum P(2) = 1.7e-76
Identities = 68/71 (95%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 500 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 559
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 560 SEANVRDVFDK 570
Score = 210 (79.0 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTMENFR+AMGKSSPSALRE +VE PN TW DIGGL+ VKRELQELVQ
Sbjct: 452 VTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Score = 197 (74.4 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 228 PLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGES 287
Query: 66 EANVRDIF 73
E+N+R F
Sbjct: 288 ESNLRKAF 295
Score = 89 (36.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ +G LE + + +L +DVDL +A +GF GADL +C A
Sbjct: 370 REIDIGIPDA----VGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAI 425
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ +E I E + + S A+ E+
Sbjct: 426 QQIREKMEL-IDLEDDTIDAEVLNSLAVTMEN 456
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 417 (151.9 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 89/130 (68%), Positives = 99/130 (76%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +D+DL ++AK T GFSGADLTEICQRACKLAIR+SIE EIR E+E+ ME
Sbjct: 673 LSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+D DPVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQQSRGFG NF+FP Q
Sbjct: 733 -DDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE--Q 789
Query: 241 SQSGGPNSAP 250
S P SAP
Sbjct: 790 RGSDAP-SAP 798
Score = 380 (138.8 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 68/71 (95%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 501 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 560
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 561 SEANVRDVFDK 571
Score = 207 (77.9 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
Identities = 43/68 (63%), Positives = 51/68 (75%)
Query: 56 ELLTMWFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVK 115
EL+ + + +A V + VTMENFR+A GKSSPSALRE +VE PN TW DIGGL+ VK
Sbjct: 434 ELIDLEDDQIDAEVLNSL-AVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK 492
Query: 116 RELQELVQ 123
RELQELVQ
Sbjct: 493 RELQELVQ 500
Score = 196 (74.1 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE + F + GPE+++ GES
Sbjct: 229 PLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGES 288
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 289 ESNLRKAFEE 298
Score = 94 (38.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ +G LE + + +L DVDL IA +GF GADL +C A
Sbjct: 371 REIDIGIPDA----VGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAAL 426
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ +E I E +++ S A+ E+
Sbjct: 427 QQIREKMEL-IDLEDDQIDAEVLNSLAVTMEN 457
Score = 40 (19.1 bits), Expect = 7.9e-40, Sum P(2) = 7.9e-40
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N I ++D+GG+ +++E+V+
Sbjct: 197 REEEEESMNDIGYDDLGGVRKQLAQIKEMVE 227
Score = 38 (18.4 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 171 GNPAASAAMETEDEDD 186
G+ A SA + +D+DD
Sbjct: 791 GSDAPSAPVPAQDDDD 806
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 417 (151.9 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 89/130 (68%), Positives = 99/130 (76%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L +D+DL ++AK T GFSGADLTEICQRACKLAIR+SIE EIR E+E+ ME
Sbjct: 673 LSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELME 732
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+D DPVPEITRAHFEEAM+FARRSV D DIRKYEMFAQTLQQSRGFG NF+FP Q
Sbjct: 733 -DDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE--Q 789
Query: 241 SQSGGPNSAP 250
S P SAP
Sbjct: 790 RGSDAP-SAP 798
Score = 380 (138.8 bits), Expect = 1.3e-75, Sum P(2) = 1.3e-75
Identities = 68/71 (95%), Positives = 71/71 (100%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEK+LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 501 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 560
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 561 SEANVRDVFDK 571
Score = 207 (77.9 bits), Expect = 2.2e-57, Sum P(2) = 2.2e-57
Identities = 43/68 (63%), Positives = 51/68 (75%)
Query: 56 ELLTMWFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVK 115
EL+ + + +A V + VTMENFR+A GKSSPSALRE +VE PN TW DIGGL+ VK
Sbjct: 434 ELIDLEDDQIDAEVLNSL-AVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVK 492
Query: 116 RELQELVQ 123
RELQELVQ
Sbjct: 493 RELQELVQ 500
Score = 196 (74.1 bits), Expect = 3.2e-56, Sum P(2) = 3.2e-56
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L +GPPG GKTL+A+A+ANE + F + GPE+++ GES
Sbjct: 229 PLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGES 288
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 289 ESNLRKAFEE 298
Score = 94 (38.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ +G LE + + +L DVDL IA +GF GADL +C A
Sbjct: 371 REIDIGIPDA----VGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAAL 426
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ +E I E +++ S A+ E+
Sbjct: 427 QQIREKMEL-IDLEDDQIDAEVLNSLAVTMEN 457
Score = 40 (19.1 bits), Expect = 7.9e-40, Sum P(2) = 7.9e-40
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQ 123
RE E N I ++D+GG+ +++E+V+
Sbjct: 197 REEEEESMNDIGYDDLGGVRKQLAQIKEMVE 227
Score = 38 (18.4 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 171 GNPAASAAMETEDEDD 186
G+ A SA + +D+DD
Sbjct: 791 GSDAPSAPVPAQDDDD 806
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 416 (151.5 bits), Expect = 3.9e-74, Sum P(2) = 3.9e-74
Identities = 88/138 (63%), Positives = 105/138 (76%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL Y++K+T GFSGADLTEICQRACKLAIR++IE EIR ER++ A A
Sbjct: 668 VAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAM---- 723
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+D+ DPVPEI + HFEEAMRFARRSV+D DIRKYEMFAQTLQQSRGFG NFRFP+ P
Sbjct: 724 -DDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-NFRFPTAP-- 779
Query: 241 SQSGGPNSAPANESGTGG 258
+SGG + G+GG
Sbjct: 780 -KSGG---GQGSSQGSGG 793
Score = 367 (134.2 bits), Expect = 3.9e-74, Sum P(2) = 3.9e-74
Identities = 65/71 (91%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVE+P+KFLKFGM PSRGVLFYGPPGCGKTLLAKAIANECQANF+S+KGPELLTMWFGE
Sbjct: 497 YPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGE 556
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 557 SEANVRDVFDK 567
Score = 199 (75.1 bits), Expect = 4.6e-74, Sum P(3) = 4.6e-74
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 225 PLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGES 284
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 285 ESNLRKAFEE 294
Score = 188 (71.2 bits), Expect = 4.6e-74, Sum P(3) = 4.6e-74
Identities = 34/48 (70%), Positives = 45/48 (93%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM++F++A+ +S+PSALRET+VEVP++ WEDIGGL+ VKRELQELVQ
Sbjct: 449 VTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQ 496
Score = 92 (37.4 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L +DVDL I+ T+G GADL +C A
Sbjct: 367 REIDIGIPDST----GRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAAL 422
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AIR+ + T I E + + + S A+ +D
Sbjct: 423 QAIRKKM-TLIDLEDDSIDADLLNSLAVTMDD 453
Score = 63 (27.2 bits), Expect = 8.6e-37, Sum P(2) = 8.6e-37
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLY 298
FP+ P +SGG + G+GG +DE +DDLY
Sbjct: 775 FPTAP---KSGG---GQGSSQGSGGHFRDEGDDDLY 804
Score = 39 (18.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 102 NITWEDIGGLEGVKRELQELVQ 123
+I ++DIGG +++E+V+
Sbjct: 202 DIGYDDIGGCRKQLAQIKEMVE 223
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 367 (134.2 bits), Expect = 1.6e-68, Sum P(2) = 1.6e-68
Identities = 75/129 (58%), Positives = 98/129 (75%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL +AK T GFSGAD+TEICQR+CK AIR++IE +I +ER++ A +P A ME
Sbjct: 670 VAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKR-AESPEA---ME 725
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
EDE++ + EI HFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRFP P
Sbjct: 726 -EDEEE-IAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTG 783
Query: 241 SQSGGPNSA 249
+ P +A
Sbjct: 784 TTGAFPGAA 792
Score = 365 (133.5 bits), Expect = 1.6e-68, Sum P(2) = 1.6e-68
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 558
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 559 SEANVREIFDK 569
Score = 202 (76.2 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 227 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 286
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 287 ESNLRKAFEE 296
Score = 183 (69.5 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V+ ++F+ A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 451 VSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 498
Score = 98 (39.6 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP ++IG LE ++ + +L +DVDL ++K T+G+ GADL +C A
Sbjct: 369 REIDIGVP----DEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAAL 424
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETE 182
IR+ ++ I + E++ S A+ +
Sbjct: 425 QCIREKMDV-IDLDDEEIDAEILNSMAVSND 454
Score = 45 (20.9 bits), Expect = 7.1e-35, Sum P(2) = 7.1e-35
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQ 123
RE + + ++D+GG+ +++ELV+
Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVE 225
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 369 (135.0 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 66/71 (92%), Positives = 70/71 (98%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGMQPS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGE
Sbjct: 493 YPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 552
Query: 65 SEANVRDIFDK 75
SEANVR++FDK
Sbjct: 553 SEANVRELFDK 563
Score = 362 (132.5 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 76/122 (62%), Positives = 89/122 (72%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL ++ + T GFSGADLTEICQRACKLAIR+SIE +I E K A + ME
Sbjct: 664 VAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEKDI--ESTK-ARQESGDTKME 720
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+D DPVPEITR HF+EAMR ARRSV+D DIRKYE FAQTL QSRG G NF+FP +
Sbjct: 721 -DDSVDPVPEITRDHFQEAMRSARRSVSDNDIRKYESFAQTLVQSRGLGNNFKFPDQESS 779
Query: 241 SQ 242
Q
Sbjct: 780 GQ 781
Score = 209 (78.6 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 34/70 (48%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPGCGKT++A+A+ANE A F + GPE+++ GES
Sbjct: 221 PLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGES 280
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 281 ESNLRKAFEE 290
Score = 180 (68.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
Identities = 38/62 (61%), Positives = 46/62 (74%)
Query: 64 ESEANVRDIFDK--VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQEL 121
E E +I + VT ++FR A+ S+PSALRET+VEVP TWEDIGGLEGVKREL+E
Sbjct: 431 EDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRET 490
Query: 122 VQ 123
VQ
Sbjct: 491 VQ 492
Score = 85 (35.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQD--VDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE ++ + + D VDL +A T+G+ GADL +C +
Sbjct: 363 REIDITIPDAT----GRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESAL 418
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
IR+ ++ I E E ++ S ++ T+D
Sbjct: 419 QCIREKMDV-IDLEDETISAEILESMSV-TQD 448
Score = 46 (21.3 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V E F + G++ RE + + ++DIGG+ +++ELV+
Sbjct: 175 VAPETFIHCEGEA---VKREDEDRLDEVGYDDIGGVRKQLGQIRELVE 219
Score = 38 (18.4 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 269 QSQSGGPNSAPANESGTGGILQDEAEDDLYN 299
QS+ G N ++ +G QD++ DDL++
Sbjct: 763 QSRGLGNNFKFPDQESSGQFNQDQS-DDLFS 792
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 366 (133.9 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 498 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 558 SEANVREIFDK 568
Score = 364 (133.2 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 75/129 (58%), Positives = 95/129 (73%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD+ +AK T GFSGAD+TEICQRACK AIR++IE +I ER + + NP A ME
Sbjct: 669 VAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRR-SQNPEA---ME 724
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
+ DD V EI AHFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRF S
Sbjct: 725 EDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAGV 784
Query: 241 SQSGGPNSA 249
++ G +A
Sbjct: 785 GRTTGVAAA 793
Score = 202 (76.2 bits), Expect = 2.9e-68, Sum P(3) = 2.9e-68
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 285
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 286 ESNLRKAFEE 295
Score = 185 (70.2 bits), Expect = 2.9e-68, Sum P(3) = 2.9e-68
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V+ E+F A+G S+PSALRET+VEVPN++WEDIGGLE VKRELQE VQ
Sbjct: 450 VSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQ 497
Score = 101 (40.6 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP ++IG LE ++ + +L +DVDL I+K T+G+ GADL +C A
Sbjct: 368 REIDIGVP----DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAAL 423
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETE 182
IR+ ++ I E + + S A+ E
Sbjct: 424 QCIREKMDV-IDLEDDSIDAEILNSMAVSNE 453
Score = 45 (20.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQ 123
RE + + ++D+GG+ +++ELV+
Sbjct: 195 REDEERLDEVGYDDVGGVRKQMAQIRELVE 224
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 366 (133.9 bits), Expect = 8.3e-68, Sum P(2) = 8.3e-68
Identities = 67/71 (94%), Positives = 69/71 (97%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPVEHPEKF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE
Sbjct: 498 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR+IFDK
Sbjct: 558 SEANVREIFDK 568
Score = 359 (131.4 bits), Expect = 8.3e-68, Sum P(2) = 8.3e-68
Identities = 75/138 (54%), Positives = 97/138 (70%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVD+ +AK T GFSGAD+TEICQRACK AIR++IE +I +E+ + + NP A ME
Sbjct: 670 IAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRR-SENPEA---ME 725
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
ED D V EI AHFEE+M++ARRSV+DADIRKY+ FAQTLQQSRGFG+ FRF ++
Sbjct: 726 -EDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGS 784
Query: 241 SQSGGPNSAPANESGTGG 258
+ G A + G
Sbjct: 785 GATTGVADPFATSAAAAG 802
Score = 202 (76.2 bits), Expect = 1.3e-67, Sum P(3) = 1.3e-67
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 226 PLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGES 285
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 286 ESNLRKAFEE 295
Score = 184 (69.8 bits), Expect = 1.3e-67, Sum P(3) = 1.3e-67
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT E+F A+G S+PSALRET+VEVPN++W DIGGLE VKRELQE VQ
Sbjct: 450 VTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQ 497
Score = 100 (40.3 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP ++IG LE ++ + +L +DVDL I+K T+G+ GADL +C A
Sbjct: 368 REIDIGVP----DEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAAL 423
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETE 182
IR+ ++ I E + + S A+ E
Sbjct: 424 QCIREKMDV-IDLEDDSIDAEILNSMAVTNE 453
Score = 46 (21.3 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQ 123
RE + ++ ++D+GG+ +++ELV+
Sbjct: 195 REDEERLDDVGYDDVGGVRKQMAQIRELVE 224
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 341 (125.1 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 60/71 (84%), Positives = 67/71 (94%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV+HPEKF KFG+ PSRGVLFYGPPG GKT+LAKA+ANEC ANFISVKGPELL+MWFGE
Sbjct: 517 YPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGE 576
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 577 SESNIRDIFDK 587
Score = 332 (121.9 bits), Expect = 3.3e-62, Sum P(2) = 3.3e-62
Identities = 79/168 (47%), Positives = 108/168 (64%)
Query: 90 PSALRETIVEVPNITWEDIGGLEGV-KRELQE--LVQDVDLNYIAKVTNGFSGADLTEIC 146
P L +T+V VP D EG+ K +L++ + DVD+ +IA T+GFSGADL +
Sbjct: 658 PGRL-DTLVYVP---LPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVT 713
Query: 147 QRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDE-DDPVPEITRAHFEEAMRFARR 205
QRA KLAI++SI EI R++++ A ME E+E +DPVPE+TRAHFEEAM+ ARR
Sbjct: 714 QRAVKLAIKESISAEIERQKQREAAGE--DVKMEDEEEGEDPVPELTRAHFEEAMKTARR 771
Query: 206 SVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQSQSGGPNSAPANE 253
SV+D +IR+YE FAQ+L+ S G + FRFPS + SG N+
Sbjct: 772 SVSDVEIRRYEAFAQSLKNSGG-SSFFRFPSANEAADSGNTFGEAGND 818
Score = 205 (77.2 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 244 PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES 303
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 304 ESNLRKAFEE 313
Score = 188 (71.2 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 41/59 (69%), Positives = 46/59 (77%)
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRET-IVEVPNITWEDIGGLEGVKRELQELVQ 123
+A V D VTMENFRYA+G S+PSALRE +VEVPN+ WEDIGGLE VKREL E VQ
Sbjct: 459 DAEVLDSLG-VTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQ 516
Score = 89 (36.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L +DVDL IA T+G+ G+DL +C A
Sbjct: 386 REVDIGIPDPT----GRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAM 441
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 442 QQIREKMD 449
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 315 (115.9 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 58/70 (82%), Positives = 65/70 (92%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV + EKFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+MWFGES
Sbjct: 516 PVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGES 575
Query: 66 EANVRDIFDK 75
E+NVRDIFDK
Sbjct: 576 ESNVRDIFDK 585
Score = 275 (101.9 bits), Expect = 6.4e-61, Sum P(3) = 6.4e-61
Identities = 63/127 (49%), Positives = 82/127 (64%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
+ +DVDL +AK T+GFSGADL + QRA KLAI+ SIE +I+RE E PA M
Sbjct: 685 VAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENET-GEAPADDVVM- 742
Query: 181 TEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ 240
DED V ++ R H EEAM+ ARRSV+DA++R+YE +A L SRG T F+F S
Sbjct: 743 --DEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGL-TGFQFDSA--D 797
Query: 241 SQSGGPN 247
S + GP+
Sbjct: 798 SNTNGPS 804
Score = 205 (77.2 bits), Expect = 6.4e-61, Sum P(3) = 6.4e-61
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 64 ESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
E +A V D VTM+NFR+A+G S+PSALRET+VEVPN+ WEDIGGLE VKREL+E VQ
Sbjct: 456 EIDAEVLDSLG-VTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQ 514
Score = 205 (77.2 bits), Expect = 6.4e-61, Sum P(3) = 6.4e-61
Identities = 35/70 (50%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 243 PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES 302
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 303 ESNLRKAFEE 312
Score = 90 (36.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE V +P+ T G LE + + +L DVDL IA T+G+ G+DL +C A
Sbjct: 385 REVDVGIPDPT----GRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAM 440
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 441 QQIREKMD 448
Score = 44 (20.5 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 197 EEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFP---SNPN 239
E AM+ R ++ D+ + E+ A+ L NFRF SNP+
Sbjct: 437 EAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPS 482
Score = 40 (19.1 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 103 ITWEDIGGLEGVKRELQELVQ 123
+ ++DIGG +++ELV+
Sbjct: 221 VGYDDIGGCRRQMAQIRELVE 241
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 308 (113.5 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 69/139 (49%), Positives = 93/139 (66%)
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE-----IRREREKLAGNPAASAAM 179
+DLN IAK+T+GFSGADL+ I QR+ K AI+ SIE + I+ E+EK+
Sbjct: 681 LDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVD 740
Query: 180 ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPN 239
E E+ED PVP ITRAHFEEAM+ A+RSV+DA++R+YE +AQ LQ SRG ++FRF N
Sbjct: 741 EVEEED-PVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQASRGQFSSFRFNENAG 799
Query: 240 QSQSGGPNSAPANESGTGG 258
+ +G ++A AN G
Sbjct: 800 ATDNG--SAAGANSGAAFG 816
Score = 299 (110.3 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV HP+++ KFG+ P++GVLF+GPPG GKTLLAKA+A E ANFISVKGPELL+MW+GE
Sbjct: 506 YPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGE 565
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 566 SESNIRDIFDK 576
Score = 200 (75.5 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPG GKT++A+A+ANE A F + GPE+++ GES
Sbjct: 234 PLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGES 293
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 294 ESNLRKAFEE 303
Score = 172 (65.6 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT +NFR+A+G S+PSALRET+VE N+TW+DIGGL+ +K EL+E V+
Sbjct: 458 VTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVE 505
Score = 91 (37.1 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP+ G LE + + +L DVDL IA T+GF GAD+ +C A
Sbjct: 376 REVDIGVPDAE----GRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAM 431
Query: 152 LAIRQSIETEIRREREKL 169
IR+ ++ I E E +
Sbjct: 432 QQIREKMDL-IDLEEETI 448
Score = 46 (21.3 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLYN 299
F N N + ++A AN G +++E DDLY+
Sbjct: 792 FRFNENAGATDNGSAAGANSGAAFGNVEEE--DDLYS 826
Score = 41 (19.5 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 103 ITWEDIGGLEGVKRELQELVQ 123
+ ++DIGG + +++ELV+
Sbjct: 212 VGYDDIGGCKKQMAQIRELVE 232
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 308 (113.5 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 69/139 (49%), Positives = 93/139 (66%)
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE-----IRREREKLAGNPAASAAM 179
+DLN IAK+T+GFSGADL+ I QR+ K AI+ SIE + I+ E+EK+
Sbjct: 681 LDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVD 740
Query: 180 ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPN 239
E E+ED PVP ITRAHFEEAM+ A+RSV+DA++R+YE +AQ LQ SRG ++FRF N
Sbjct: 741 EVEEED-PVPYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQASRGQFSSFRFNENAG 799
Query: 240 QSQSGGPNSAPANESGTGG 258
+ +G ++A AN G
Sbjct: 800 ATDNG--SAAGANSGAAFG 816
Score = 299 (110.3 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV HP+++ KFG+ P++GVLF+GPPG GKTLLAKA+A E ANFISVKGPELL+MW+GE
Sbjct: 506 YPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGE 565
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 566 SESNIRDIFDK 576
Score = 200 (75.5 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P +G+L YGPPG GKT++A+A+ANE A F + GPE+++ GES
Sbjct: 234 PLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGES 293
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 294 ESNLRKAFEE 303
Score = 172 (65.6 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 30/48 (62%), Positives = 41/48 (85%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VT +NFR+A+G S+PSALRET+VE N+TW+DIGGL+ +K EL+E V+
Sbjct: 458 VTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVE 505
Score = 91 (37.1 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP+ G LE + + +L DVDL IA T+GF GAD+ +C A
Sbjct: 376 REVDIGVPDAE----GRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAM 431
Query: 152 LAIRQSIETEIRREREKL 169
IR+ ++ I E E +
Sbjct: 432 QQIREKMDL-IDLEEETI 448
Score = 46 (21.3 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 263 FPSNPNQSQSGGPNSAPANESGTGGILQDEAEDDLYN 299
F N N + ++A AN G +++E DDLY+
Sbjct: 792 FRFNENAGATDNGSAAGANSGAAFGNVEEE--DDLYS 826
Score = 41 (19.5 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 103 ITWEDIGGLEGVKRELQELVQ 123
+ ++DIGG + +++ELV+
Sbjct: 212 VGYDDIGGCKKQMAQIRELVE 232
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 347 (127.2 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 61/71 (85%), Positives = 68/71 (95%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV+HPEKFLKFG+ PSRGVLFYGPPG GKT+LAKA+ANEC ANFISVKGPELL+MWFGE
Sbjct: 514 YPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGE 573
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 574 SESNIRDIFDK 584
Score = 292 (107.8 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 73/171 (42%), Positives = 108/171 (63%)
Query: 90 PSALRETIVEVPNITWEDIGGLEGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L ++++ VP +++G L +K +L++ + DVDL YIA T+GFSGADL I Q
Sbjct: 655 PGRL-DSLIYVP--LPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQ 711
Query: 148 RACKLAIRQSIETEIRRERE-KLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRS 206
RA K+AI++SI +I R + + AG M+ ED +DPVPE+T+ HFEEAM+ AR+S
Sbjct: 712 RAVKIAIKESITADINRTKALEAAGE---DVPMD-EDAEDPVPELTKRHFEEAMQQARKS 767
Query: 207 VNDADIRKYEMFAQTLQQSRGFGTNFRFPSNPNQ-SQSGGPN-SAPANESG 255
V+D +IR+YE FAQ ++ + G G F+FP + SGG + N+ G
Sbjct: 768 VSDVEIRRYEAFAQQMKNA-GPGAFFKFPEGEGAPAASGGETFNDGGNDDG 817
Score = 206 (77.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RGVL YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 241 PLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES 300
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 301 ESNLRKAFEE 310
Score = 178 (67.7 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRET-IVEVPNITWEDIGGLEGVKRELQELVQ 123
+A V D VTMENFR+A+G S+PSALRE +VEVPN+ WEDIGGL+ VK++L+E VQ
Sbjct: 456 DAEVLDSLG-VTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQ 513
Score = 82 (33.9 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE + + +L DVDL IA T+G+ G+D+ +C A
Sbjct: 383 REVDIGIPDPT----GRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAM 438
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 439 QQIREKMD 446
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 308 (113.5 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 54/71 (76%), Positives = 64/71 (90%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YPV HP+++ KFG+ PS+GVLFYGPPG GKTLLAKA+A E ANFISVKGPELL+MW+GE
Sbjct: 505 YPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGE 564
Query: 65 SEANVRDIFDK 75
SE+N+RDIFDK
Sbjct: 565 SESNIRDIFDK 575
Score = 264 (98.0 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 65/152 (42%), Positives = 88/152 (57%)
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK---LAGNPAA----SA 177
++L IAK T GFSGADL I QRA K AI+ SIE + E EK + G A
Sbjct: 680 LELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGA 739
Query: 178 AMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFPSN 237
E E E DPVP IT+ HF EAM+ A+RSV+DA++R+YE ++Q ++ SRG +NF F
Sbjct: 740 KAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNFNDA 799
Query: 238 PNQSQSGGPNSAPANESGTGGILLMFPSNPNQ 269
P + + ++A +N S G F SN +
Sbjct: 800 PLGTTA--TDNANSNNSAPSGAGAAFGSNAEE 829
Score = 204 (76.9 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP+ F G++P RGVL YGPPG GKTL+A+A+ANE A F + GPE+++ GES
Sbjct: 233 PLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGES 292
Query: 66 EANVRDIFDK 75
E+N+R F++
Sbjct: 293 ESNLRKAFEE 302
Score = 181 (68.8 bits), Expect = 5.5e-38, Sum P(2) = 5.5e-38
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 56 ELLTMWFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVK 115
+L+ + E +A V D VTM+NFR+A+G S+PSALRET+VE N+TW+D+GGL+ +K
Sbjct: 438 DLIDLDEDEIDAEVLDSLG-VTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIK 496
Query: 116 RELQELVQ 123
EL+E V+
Sbjct: 497 EELKETVE 504
Score = 89 (36.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQ--ELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + +P+ T G LE ++ + +L DVDL +A T+G+ GAD+ +C A
Sbjct: 375 REVDIGIPDAT----GRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAM 430
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 431 QQIREKMD 438
Score = 46 (21.3 bits), Expect = 5.6e-16, Sum P(3) = 5.6e-16
Identities = 18/66 (27%), Positives = 28/66 (42%)
Query: 197 EEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTNFRFP---SNPNQSQSGGPNSAPANE 253
E AM+ R ++ D+ + E+ A+ L NFRF SNP+ + S
Sbjct: 427 EAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTW 486
Query: 254 SGTGGI 259
GG+
Sbjct: 487 DDVGGL 492
Score = 43 (20.2 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 276 NSAPANESGTGGILQDEAE--DDLYN 299
NSAP SG G AE DDLY+
Sbjct: 813 NSAP---SGAGAAFGSNAEEDDDLYS 835
Score = 38 (18.4 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 103 ITWEDIGGLEGVKRELQELVQ 123
+ ++DIGG +++E+V+
Sbjct: 211 VGYDDIGGCRKQMAQIREMVE 231
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 348 (127.6 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 59/71 (83%), Positives = 68/71 (95%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP++HP+KF KFGM PSRGVLFYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGE
Sbjct: 498 YPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR++FDK
Sbjct: 558 SEANVREVFDK 568
Score = 194 (73.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RGVL YGPPG GKT +A+A+ANE A F + GPE+++ GE+
Sbjct: 226 PLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEA 285
Query: 66 EANVRDIFDK 75
EAN+R F++
Sbjct: 286 EANLRRAFEE 295
Score = 152 (58.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 64 ESEANVRDIFDK--VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQEL 121
E E +++ + VT ++F A+G +PS+LRET+VEVPN+ W+DIGGL+ VK L+E+
Sbjct: 436 EDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREM 495
Query: 122 V 122
+
Sbjct: 496 I 496
Score = 134 (52.2 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQR 148
P L + I + +P++ I L + R+ + ++V ++++A+ T GFSGADL E+CQR
Sbjct: 639 PGRLDQLIYIPLPDLGAR-ISILTAILRKCP-VAENVPIDFLAQKTAGFSGADLAELCQR 696
Query: 149 ACKLAIRQSIETEIRREREKLA-GNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSV 207
A + AIR +I+ E ++ KL N + ET + D H + + +
Sbjct: 697 AARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNEND--------VHNKTEQQANDQQK 748
Query: 208 NDADIRKYEM 217
ND D KYE+
Sbjct: 749 NDDDNIKYEI 758
Score = 103 (41.3 bits), Expect = 7.2e-39, Sum P(2) = 7.2e-39
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 141 DLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETE-DEDDPVP-EITRAHFEE 198
D E+ +++ KL + E E E N A + + ++DD + EITR HF+E
Sbjct: 707 DAEEMNKKS-KLELSNKKENEQNETNENDVHNKTEQQANDQQKNDDDNIKYEITRHHFKE 765
Query: 199 AMRFARRSVNDADIRKYEMF 218
+ ARRSV+ AD+ KY+ F
Sbjct: 766 GLAGARRSVSQADLIKYDNF 785
Score = 82 (33.9 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP +D G E + + +L DV L +A T+GF GADL ++C A
Sbjct: 368 REIDIGVP----DDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAAL 423
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 424 TCIREKMD 431
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 348 (127.6 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 59/71 (83%), Positives = 68/71 (95%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP++HP+KF KFGM PSRGVLFYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGE
Sbjct: 498 YPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGE 557
Query: 65 SEANVRDIFDK 75
SEANVR++FDK
Sbjct: 558 SEANVREVFDK 568
Score = 194 (73.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HP F G++P RGVL YGPPG GKT +A+A+ANE A F + GPE+++ GE+
Sbjct: 226 PLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEA 285
Query: 66 EANVRDIFDK 75
EAN+R F++
Sbjct: 286 EANLRRAFEE 295
Score = 152 (58.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 64 ESEANVRDIFDK--VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQEL 121
E E +++ + VT ++F A+G +PS+LRET+VEVPN+ W+DIGGL+ VK L+E+
Sbjct: 436 EDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREM 495
Query: 122 V 122
+
Sbjct: 496 I 496
Score = 134 (52.2 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQR 148
P L + I + +P++ I L + R+ + ++V ++++A+ T GFSGADL E+CQR
Sbjct: 639 PGRLDQLIYIPLPDLGAR-ISILTAILRKCP-VAENVPIDFLAQKTAGFSGADLAELCQR 696
Query: 149 ACKLAIRQSIETEIRREREKLA-GNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSV 207
A + AIR +I+ E ++ KL N + ET + D H + + +
Sbjct: 697 AARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNEND--------VHNKTEQQANDQQK 748
Query: 208 NDADIRKYEM 217
ND D KYE+
Sbjct: 749 NDDDNIKYEI 758
Score = 103 (41.3 bits), Expect = 7.2e-39, Sum P(2) = 7.2e-39
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 141 DLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETE-DEDDPVP-EITRAHFEE 198
D E+ +++ KL + E E E N A + + ++DD + EITR HF+E
Sbjct: 707 DAEEMNKKS-KLELSNKKENEQNETNENDVHNKTEQQANDQQKNDDDNIKYEITRHHFKE 765
Query: 199 AMRFARRSVNDADIRKYEMF 218
+ ARRSV+ AD+ KY+ F
Sbjct: 766 GLAGARRSVSQADLIKYDNF 785
Score = 82 (33.9 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 94 RETIVEVPNITWEDIGGLE--GVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VP +D G E + + +L DV L +A T+GF GADL ++C A
Sbjct: 368 REIDIGVP----DDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAAL 423
Query: 152 LAIRQSIE 159
IR+ ++
Sbjct: 424 TCIREKMD 431
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 300 (110.7 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+E+ + KF ++G+L YGPPGCGKTLLAKAIANEC+ANFISVKGPELLTMWFGE
Sbjct: 952 YPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGE 1011
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 1012 SEANVRDLFDK 1022
Score = 187 (70.9 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-EIRR-EREKLAGNPAASAA 178
L +DVD++ +AK T GFSGAD+T +CQ A AI+++I IR+ E+E+ S
Sbjct: 1121 LNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFK 1180
Query: 179 METEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
++ D DPVP +++ HF+ A + AR S+ D+ KYE F + L
Sbjct: 1181 IDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 172 (65.6 bits), Expect = 9.5e-34, Sum P(3) = 9.5e-34
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++PE F+ G+ +GVL +G PG GKT +AKAIANE A + GPE+++ GES
Sbjct: 546 PLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGES 605
Query: 66 EANVRDIFDKVT 77
E +R IF K +
Sbjct: 606 EQKLRKIFKKAS 617
Score = 122 (48.0 bits), Expect = 9.5e-34, Sum P(3) = 9.5e-34
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 72 IFDKVTME--NFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELV 122
I +K+T++ +F++A+ +PS+LRE V++P +TW DIGG+ VK +L+E +
Sbjct: 898 ILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETI 950
Score = 75 (31.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 115 KRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
K + +L DV+L IAK +G+ GADL ++C A I++ I
Sbjct: 707 KTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Score = 54 (24.1 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 102 NITWEDIGGLEGVKRELQELVQDVDLNY 129
+IT+ED+GG++ +++EL++ + L Y
Sbjct: 523 DITYEDLGGMKKQLNKIRELIE-LPLKY 549
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 300 (110.7 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+E+ + KF ++G+L YGPPGCGKTLLAKAIANEC+ANFISVKGPELLTMWFGE
Sbjct: 952 YPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGE 1011
Query: 65 SEANVRDIFDK 75
SEANVRD+FDK
Sbjct: 1012 SEANVRDLFDK 1022
Score = 187 (70.9 bits), Expect = 6.3e-42, Sum P(2) = 6.3e-42
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-EIRR-EREKLAGNPAASAA 178
L +DVD++ +AK T GFSGAD+T +CQ A AI+++I IR+ E+E+ S
Sbjct: 1121 LNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFK 1180
Query: 179 METEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
++ D DPVP +++ HF+ A + AR S+ D+ KYE F + L
Sbjct: 1181 IDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 172 (65.6 bits), Expect = 9.5e-34, Sum P(3) = 9.5e-34
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++PE F+ G+ +GVL +G PG GKT +AKAIANE A + GPE+++ GES
Sbjct: 546 PLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGES 605
Query: 66 EANVRDIFDKVT 77
E +R IF K +
Sbjct: 606 EQKLRKIFKKAS 617
Score = 122 (48.0 bits), Expect = 9.5e-34, Sum P(3) = 9.5e-34
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 72 IFDKVTME--NFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELV 122
I +K+T++ +F++A+ +PS+LRE V++P +TW DIGG+ VK +L+E +
Sbjct: 898 ILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETI 950
Score = 75 (31.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 115 KRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
K + +L DV+L IAK +G+ GADL ++C A I++ I
Sbjct: 707 KTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHI 750
Score = 54 (24.1 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 102 NITWEDIGGLEGVKRELQELVQDVDLNY 129
+IT+ED+GG++ +++EL++ + L Y
Sbjct: 523 DITYEDLGGMKKQLNKIRELIE-LPLKY 549
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 240 (89.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HPE F++ G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVRDIFDK 75
SE VR+ F K
Sbjct: 705 SERAVRETFRK 715
Score = 196 (74.1 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ RGVL YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 372 PLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 431
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 432 EAKLRQIFAEATLRH 446
Score = 138 (53.6 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+++F AM PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVE 644
Score = 81 (33.6 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + VPN + + L+ + R + L+ + +L +A +G+ GADL +C A A
Sbjct: 517 KEIEIGVPNAQ-DRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCA 575
Query: 154 IRQSIETEIRREREKLAG 171
+R+ ++ + K+AG
Sbjct: 576 LRRILKKQPNLPDVKVAG 593
Score = 75 (31.5 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRER 166
+VDL+ + T+ +SGA++ +C+ A LA+ + I+ + +R
Sbjct: 818 EVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKR 860
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 177 AAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
AA+ +ED I + HF +A+ + ++ R YE + +
Sbjct: 843 AALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDYQE 886
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 245 (91.3 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HPE F++ G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVRDIFDK 75
SE VR+IF K
Sbjct: 705 SERAVREIFRK 715
Score = 204 (76.9 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ P RGVL YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 372 PLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 431
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 432 EARLRQIFAEATLRH 446
Score = 133 (51.9 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+ +F M PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVE 644
Score = 86 (35.3 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + VPN + + L+ + + + L+ +V+L +A +G+ GADL +C A A
Sbjct: 517 KEIEIGVPNAA-DRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYA 575
Query: 154 IRQSIETEIRREREKLAG 171
+R+ + + K+AG
Sbjct: 576 LRRVLNKQPNLSDSKMAG 593
Score = 66 (28.3 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIE 159
DV+L+ + T+ +SGA++ +C+ A LA+ + I+
Sbjct: 818 DVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQ 853
Score = 49 (22.3 bits), Expect = 2.1e-25, Sum P(3) = 2.1e-25
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 177 AAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
AA+ +ED ITR HF A+ ++ + R YE + +
Sbjct: 843 AALLALEEDIQANSITRRHFTRALSTVTPRISKSLRRFYEEYQE 886
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 253 (94.1 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 56/132 (42%), Positives = 82/132 (62%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+++P+ F++ G++P +G+L YGPPGC KTLLAKA+A E NFI+VKGPELL+ W GE
Sbjct: 640 WPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGE 699
Query: 65 SEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIG-GLEGVKRELQELVQ 123
SE VRDIF K ++SPS L E+ + G G V+R + +L+
Sbjct: 700 SERAVRDIFKKAR---------QNSPSIL--FFDEIDGLAISRSGEGSGAVERVVSQLLT 748
Query: 124 DVD-LNYIAKVT 134
++D + + VT
Sbjct: 749 EMDGIQPLTNVT 760
Score = 147 (56.8 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 16 FGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 73
FG++P +G+L YGPPG GKTLLA+ +A + A ++ G ++L ++G +E ++ IF
Sbjct: 341 FGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIF 398
Score = 123 (48.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 21/62 (33%), Positives = 42/62 (67%)
Query: 64 ESEANVRDIFD--KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQEL 121
+ E N++++ K++M + A+ + PS++RE +VE+P + W DIGG E +K++L+E
Sbjct: 578 KQEENLQNLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEA 637
Query: 122 VQ 123
++
Sbjct: 638 IE 639
Score = 87 (35.7 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 14/38 (36%), Positives = 28/38 (73%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE 161
D+D+N ++ +T+G+SGA++T IC+ A A+++ I +
Sbjct: 811 DIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAK 848
Score = 60 (26.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 126 DLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDED 185
++ IA T+GF GAD+ +C+ A + I+ E +KL ++ E E+
Sbjct: 524 EIAMIASKTHGFVGADIESLCKEASLKCFNR-----IKNENQKLF------QSINIEKEE 572
Query: 186 DPVPEITRAHFEEAMRFARRSVND 209
E + + + + S+ND
Sbjct: 573 KGKEEKQEENLQNLLSLIKLSMND 596
Score = 38 (18.4 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 174 AASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
A+ AAM+ ED EI +HF A+ ++ + + Y+ + +
Sbjct: 836 ASIAAMK---EDINAKEINMSHFISAIGNVKKGITQEMLDFYKDYQE 879
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 236 (88.1 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HP+ F + G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVRDIFDK 75
SE VR+IF K
Sbjct: 705 SERAVREIFRK 715
Score = 193 (73.0 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ RG+L YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 372 PLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 431
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 432 EARLRQIFAEATLRH 446
Score = 133 (51.9 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+ +F M PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVE 644
Score = 75 (31.5 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + +PN + + L+ + R + L+ +L +A +G+ GADL +C A A
Sbjct: 517 KEIEIGIPNAQ-DRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHA 575
Query: 154 IRQSIETEIRREREKLAG 171
+R+ + + K+AG
Sbjct: 576 LRRVLRKQPNLPDSKVAG 593
Score = 72 (30.4 bits), Expect = 5.9e-26, Sum P(3) = 5.9e-26
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRER 166
+VDL+ + T+ +SGA++ +C+ A LA+ ++I+ + +R
Sbjct: 818 EVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCIMKR 860
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 227 (85.0 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +PE+F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 599 PVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 659 ERAVRQVFQR 668
Score = 185 (70.2 bits), Expect = 4.8e-24, Sum P(4) = 4.8e-24
Identities = 35/69 (50%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 283 MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 342
Query: 67 ANVRDIFDK 75
+RD+FD+
Sbjct: 343 QKLRDLFDQ 351
Score = 106 (42.4 bits), Expect = 4.8e-24, Sum P(4) = 4.8e-24
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 78 MENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ +F A+ + PSA RE V VPN+TW D+G LE ++ EL
Sbjct: 552 LNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREEL 592
Score = 76 (31.8 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L + + +++A +T GF GADL +C+ A
Sbjct: 427 REVCLGIPDEASRERI--LQTLCRKLR-LPETFNFSHLAHLTPGFVGADLMALCREAAVC 483
Query: 153 AIRQSI--ETEIRREREKLAGNPA 174
A+ + + E +R + G P+
Sbjct: 484 AVHRVLMRRQEQQRTEPETGGLPS 507
Score = 65 (27.9 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 191 ITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
++ HFEEA R + S++ D R YE ++L Q
Sbjct: 822 VSHKHFEEAFRKVKPSISVKDQRMYEALQRSLSQ 855
Score = 59 (25.8 bits), Expect = 7.2e-26, Sum P(3) = 7.2e-26
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 113 GVKRELQELVQDVDLNYIAKV--TNGFSGADLTEICQRACKLAIRQSI 158
G K L E DVDL IA + ++GADL+ + + A A+RQ I
Sbjct: 764 GTKPPLDE---DVDLEAIANDHRCDCYTGADLSALVREASLCALRQEI 808
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 238 (88.8 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ H +KF + G++P RG+L +GPPGC KT++AKA+A E + NF+S+KGPEL +MW GE
Sbjct: 553 WPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGE 612
Query: 65 SEANVRDIFDK 75
SE VR++F K
Sbjct: 613 SERAVREVFRK 623
Score = 101 (40.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 78 MENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
M + + A+ + PSA+RE ++E PN+ W DIGG ++ +Q+ ++
Sbjct: 507 MPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIE 552
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 14 LKFGMQPSRGVLFYGPPGCGKTLLAKA---IANE-CQAN--FISVKGPELLTMWFGESEA 67
L G++ SRG+L YG GCGK+++ +A +A E Q + I + E+ + + GE+E
Sbjct: 297 LPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQ 356
Query: 68 NVRDIFDK 75
+ IF++
Sbjct: 357 KLGAIFER 364
Score = 91 (37.1 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 114 VKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE 161
+K + DVD+ + ++T G+SGA++ +C A A+ QS E E
Sbjct: 719 IKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAE 766
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 221 (82.9 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++PE+F G+ G+L GPPGCGKTLLAKA+AN NFISVKGPELL M+ GES
Sbjct: 539 PIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGES 598
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 599 ERAVRQVFQR 608
Score = 177 (67.4 bits), Expect = 6.6e-22, Sum P(4) = 6.6e-22
Identities = 31/69 (44%), Positives = 47/69 (68%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + + G+ P RG L +GPPGCGKTLLA+A+A E + + PEL++ GESE
Sbjct: 246 MRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESE 305
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 306 QKLRELFEQ 314
Score = 97 (39.2 bits), Expect = 6.6e-22, Sum P(4) = 6.6e-22
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
V M +F ++ + PSA RE VP++TW D+G L+ V+ EL
Sbjct: 490 VLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVREEL 532
Score = 73 (30.8 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 111 LEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L+ + R+++ L D D ++A++T G+ GADL +C+ A A+ +
Sbjct: 406 LKTLCRKIR-LPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNR 450
Score = 67 (28.6 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 180 ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+T E ++R HFE+A + R SV+ D YE +TL +
Sbjct: 752 QTHTESAKDIRVSRVHFEDAFKKVRPSVSKKDQLMYERLRETLSR 796
Score = 55 (24.4 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 120 ELVQDVDLNYIAKVTN--GFSGADLTEICQRACKLAIRQSIE 159
+L DV L IA F+GADL+ + + AC A+R ++
Sbjct: 708 QLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLD 749
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 236 (88.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE +LK G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 536 MCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 595
Query: 61 WFGESEANVRDIFDK 75
+ GESE VR +F +
Sbjct: 596 YVGESEKAVRQVFQR 610
Score = 191 (72.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + G++P RGVL YGPPGCGKT +A A+A E + FI++ P +++ GES
Sbjct: 212 PILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGES 271
Query: 66 EANVRDIFDK 75
E +R+IF++
Sbjct: 272 EKKLREIFEE 281
Score = 89 (36.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQE-LVQDV 125
+T ++F A+ PSA RE +P++TW+++G L ++ EL +VQ +
Sbjct: 492 ITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPI 542
Score = 87 (35.7 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGVKRELQE-LVQDVDLNYIAKVTN--GFSGADLTEI 145
P L +T+ +E+P E + L+ + R L +VDLN I++ + FSGADL+ +
Sbjct: 678 PGRLDKTLYIELPTPE-ERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSL 736
Query: 146 CQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARR 205
+ A A+++ + +K+ ++ ++ EDD IT F+ A+ R
Sbjct: 737 VKEAGVWALKKRFF-----QNQKIQELDSSGFYEDSIGEDDI--SITAEDFDHALSSIRP 789
Query: 206 SVNDADIRKYEMFAQTL 222
SV+D D +YE + L
Sbjct: 790 SVSDRDRMRYEKLNKKL 806
Score = 71 (30.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNY--IAKVTNGFSGADLTEICQRACK 151
RE + VPN + I L+ + + ++ L NY ++K+T G+ GADL + A
Sbjct: 359 REICLNVPNEE-QRISILKAMTKNIK-LENGEHFNYRELSKLTPGYVGADLKSLVTAAGI 416
Query: 152 LAIRQSIET--EIRREREKLAGNP--AASAAMETEDED 185
AI++ ET E++ E + + A +++ ED
Sbjct: 417 SAIKRIFETMSELQEESHSVKDDSMDADPVSLDANKED 454
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 236 (88.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE +LK G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 536 MCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 595
Query: 61 WFGESEANVRDIFDK 75
+ GESE VR +F +
Sbjct: 596 YVGESEKAVRQVFQR 610
Score = 191 (72.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + G++P RGVL YGPPGCGKT +A A+A E + FI++ P +++ GES
Sbjct: 212 PILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGES 271
Query: 66 EANVRDIFDK 75
E +R+IF++
Sbjct: 272 EKKLREIFEE 281
Score = 89 (36.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQE-LVQDV 125
+T ++F A+ PSA RE +P++TW+++G L ++ EL +VQ +
Sbjct: 492 ITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPI 542
Score = 87 (35.7 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGVKRELQE-LVQDVDLNYIAKVTN--GFSGADLTEI 145
P L +T+ +E+P E + L+ + R L +VDLN I++ + FSGADL+ +
Sbjct: 678 PGRLDKTLYIELPTPE-ERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSL 736
Query: 146 CQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARR 205
+ A A+++ + +K+ ++ ++ EDD IT F+ A+ R
Sbjct: 737 VKEAGVWALKKRFF-----QNQKIQELDSSGFYEDSIGEDDI--SITAEDFDHALSSIRP 789
Query: 206 SVNDADIRKYEMFAQTL 222
SV+D D +YE + L
Sbjct: 790 SVSDRDRMRYEKLNKKL 806
Score = 71 (30.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNY--IAKVTNGFSGADLTEICQRACK 151
RE + VPN + I L+ + + ++ L NY ++K+T G+ GADL + A
Sbjct: 359 REICLNVPNEE-QRISILKAMTKNIK-LENGEHFNYRELSKLTPGYVGADLKSLVTAAGI 416
Query: 152 LAIRQSIET--EIRREREKLAGNP--AASAAMETEDED 185
AI++ ET E++ E + + A +++ ED
Sbjct: 417 SAIKRIFETMSELQEESHSVKDDSMDADPVSLDANKED 454
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 237 (88.5 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P +HPE F +FG+ P G+L YGPPGC KTL+A+A+A+E + NF++VKGPEL + W G+
Sbjct: 477 WPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGD 536
Query: 65 SEANVRDIFDK 75
SE +RD+F +
Sbjct: 537 SEKAIRDLFSR 547
Score = 103 (41.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 78 MENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELV 122
+E A + P+ +R+ I+EVPN++W DIGG E +K E+Q+ V
Sbjct: 431 LERVNDARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAV 475
Score = 84 (34.6 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 90 PSALRETI-VEVP-NITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L I V +P +T I + K + + V+ +D + + T+G+SGA+L +C+
Sbjct: 616 PGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDK--LVEKTSGYSGAELVAVCR 673
Query: 148 RACKLAIRQSIETEI 162
A A+R+SI+ I
Sbjct: 674 TAAMFAMRESIDATI 688
Score = 59 (25.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 24 VLFYGPPGCGKTLLAKAIA 42
VL +G PG GKTLL K +A
Sbjct: 275 VLIWGLPGSGKTLLLKEVA 293
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 228 (85.3 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +PE+F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 600 PVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 659
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 660 ERAVRQVFQR 669
Score = 183 (69.5 bits), Expect = 6.0e-23, Sum P(4) = 6.0e-23
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
V HPE +L G+ P RG L +GPPGCGKTLLA+AIA E + + V E+++ GESE
Sbjct: 279 VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESE 338
Query: 67 ANVRDIFDKVTM 78
+R++FD+ +
Sbjct: 339 QKLRELFDQAVL 350
Score = 106 (42.4 bits), Expect = 6.0e-23, Sum P(4) = 6.0e-23
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ M +F A+ PSA RE V +P++TW DIG LE V+ EL
Sbjct: 551 IEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREEL 593
Score = 85 (35.0 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ E I L+ + R+L+ L D ++A +T G+ GADL +C+ A
Sbjct: 423 REICLGIPDEAAREKI--LQTLCRKLK-LPGSFDFLHLAHLTPGYVGADLMALCREAAMC 479
Query: 153 AI-RQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEITR 193
+ R I++E ++ + AG A ++ E E PV E T+
Sbjct: 480 TVNRVLIKSEEQQRKYVQAGGNTAEESVGIETEI-PVEENTK 520
Score = 66 (28.3 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
+I+R HFEEA R + SV+ D YE Q+L
Sbjct: 824 KISRKHFEEAFRKVKSSVSKKDQIMYEELRQSL 856
Score = 50 (22.7 bits), Expect = 3.8e-25, Sum P(3) = 3.8e-25
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 124 DVDLNYIA--KVTNGFSGADLTEICQRACKLAIRQSIE---TEIRREREKL 169
DV+L IA + + ++GADL+ + + A A+RQ + T+ ++E+ ++
Sbjct: 773 DVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEKGEI 823
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 231 (86.4 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 43/70 (61%), Positives = 55/70 (78%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F + G++P GVL YGPPG GKTLLAKA+A E F+S+KGPELL M+ GES
Sbjct: 674 PLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGES 732
Query: 66 EANVRDIFDK 75
EANVR++F+K
Sbjct: 733 EANVRNVFEK 742
Score = 92 (37.4 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 120 ELVQDVDLNYIAKVTN-GFSGADLTEICQRACKLAI-RQSIETEIRREREKLAGNPAASA 177
+L + +DLN IAK + F+GAD+ +C A AI R++ E ++ + +G ++
Sbjct: 844 KLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLIQA---SGTDLSTE 900
Query: 178 AM--ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEM 217
E++D IT+ F +++ R S+++ ++ +YEM
Sbjct: 901 EFFKRNENQDSLELRITKEDFLTSLKKLRPSISEQELHRYEM 942
Score = 77 (32.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 96 TIVEVPNITWEDIGGLEGVKRELQELVQ 123
TI VP + W+DIGGLE K L++ +Q
Sbjct: 645 TIFTVPKVNWDDIGGLEEAKTVLRDTLQ 672
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 218 (81.8 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 43/70 (61%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV++PE + G+ GVL GPPGCGKTLLAKAIANE NFISVKGPEL+ M+ GES
Sbjct: 681 PVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGES 740
Query: 66 EANVRDIFDK 75
E VR F +
Sbjct: 741 ERAVRACFQR 750
Score = 168 (64.2 bits), Expect = 8.7e-22, Sum P(4) = 8.7e-22
Identities = 29/69 (42%), Positives = 47/69 (68%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
++ PE + + G+ PSRG+L +GPPGCGKT LA+AI+ + + + + EL+ GESE
Sbjct: 270 IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESE 329
Query: 67 ANVRDIFDK 75
+R++FD+
Sbjct: 330 ERIREVFDQ 338
Score = 96 (38.9 bits), Expect = 8.7e-22, Sum P(4) = 8.7e-22
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ 119
+T+ +F A+ PSA RE + VP+ TW+DIG LE ++ EL+
Sbjct: 632 LTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELK 675
Score = 85 (35.0 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
L DVDL+ IA T G++GADL + ++A ++RQS+
Sbjct: 853 LADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSL 890
Score = 85 (35.0 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 41/183 (22%), Positives = 77/183 (42%)
Query: 112 EGVKRELQELVQDVDLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E ++ + + L D LNY IA++T G+ GADL + RA +A+++ +++ RE
Sbjct: 428 EILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRR---SMKKFRELH 484
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADI-RKYEMFAQTL--QQSR 226
A + + T D+D+P + ++ + DA+ +K + +T +S
Sbjct: 485 AASEKNMTTV-TLDDDEPSEDAGETPVPDSK--GEETAKDAEAEQKVDGDKETSAKDKSE 541
Query: 227 GFGTNFRFPSNPNQSQSG--GPNSAPAN--ESGTGGIL---LMFPSNPNQSQSGGPNSAP 279
G N P S P P E T + + P P ++ +S+
Sbjct: 542 GDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSS 601
Query: 280 ANE 282
+N+
Sbjct: 602 SND 604
Score = 53 (23.7 bits), Expect = 9.0e-25, Sum P(3) = 9.0e-25
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 195 HFEEAMRFARRSVNDADIRKYE 216
HF+EA++ R SVN+ D + Y+
Sbjct: 906 HFQEALQQLRPSVNEQDRKIYD 927
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 222 (83.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 41/73 (56%), Positives = 52/73 (71%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE + G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL
Sbjct: 506 MAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNK 565
Query: 61 WFGESEANVRDIF 73
+ GESE VR +F
Sbjct: 566 YVGESERAVRQVF 578
Score = 201 (75.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE + G+ P RGVL +GPPGCGKT+LA A+ANE FIS+ P +++ GES
Sbjct: 193 PIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGES 252
Query: 66 EANVRDIFDK 75
E VR++F++
Sbjct: 253 EKKVREVFEE 262
Score = 96 (38.9 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 35/134 (26%), Positives = 71/134 (52%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVT--NGFSGADLTEIC 146
P L +T+ V++P+ E + L+ + ++ L ++V+L+ + + + FSGADL +
Sbjct: 648 PGRLDKTLLVDLPD-AHERVEILKTLTKQTP-LHEEVNLDVLGRDERCSNFSGADLAALV 705
Query: 147 QRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRS 206
+ A A+R ++ +I ++ + +A+E P+ +T A FE A + + S
Sbjct: 706 REAAVTALRSAVFADIASNEPEITQH----SALE------PI-RVTNADFELAFKNIKPS 754
Query: 207 VNDADIRKYEMFAQ 220
V+D D +KY+ A+
Sbjct: 755 VSDRDRQKYQRLAK 768
Score = 91 (37.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 79 ENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ-ELVQDV 125
++F A+ K PS+ RE VP ++W +IG L+ ++ ELQ +VQ +
Sbjct: 465 QDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPI 512
Score = 59 (25.8 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 120 ELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEI 162
+L D D +AK T G+ GADL + A +AI++ I EI
Sbjct: 363 KLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR-IFNEI 404
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 223 (83.6 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 42/70 (60%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +P++F G+ G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 599 PVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 659 ERAVRQVFQR 668
Score = 181 (68.8 bits), Expect = 9.5e-23, Sum P(4) = 9.5e-23
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 283 MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 342
Query: 67 ANVRDIFDK 75
+R++FD+
Sbjct: 343 QKLRELFDQ 351
Score = 107 (42.7 bits), Expect = 9.5e-23, Sum P(4) = 9.5e-23
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ + PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 550 IELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDEL 592
Score = 74 (31.1 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ E I L+ + R+L+ L + + ++A +T GF GADL +C+ A
Sbjct: 427 REVCLGIPDEAARERI--LQTLCRKLR-LPETFNFCHLAHLTPGFVGADLMALCREAAMC 483
Query: 153 AIRQSIETEIRREREK--LAGNPA 174
A+ + + + ++++K + G P+
Sbjct: 484 AVNRVLMKQQAQQKKKPEIEGLPS 507
Score = 64 (27.6 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 113 GVKRELQELVQDVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSIETE 161
G K L E DV+L IA N ++GADLT + + A A+RQ I +
Sbjct: 764 GTKPPLDE---DVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQ 811
Score = 52 (23.4 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+++ HFE+A + + S++ D YE ++L Q
Sbjct: 821 KVSHKHFEDAFKKVKPSISIKDQVMYEALQRSLSQ 855
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 231 (86.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 1 MISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 60
M P++ PE + K G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 547 MAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 606
Query: 61 WFGESEANVRDIFDK 75
+ GESE ++R +F +
Sbjct: 607 YVGESERSIRQVFTR 621
Score = 209 (78.6 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE FL G++P RGVL +GPPGCGKT +A A+A E Q FIS+ P +++ GES
Sbjct: 224 PILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGES 283
Query: 66 EANVRDIFDK 75
E +RD+FD+
Sbjct: 284 EKKIRDLFDE 293
Score = 87 (35.7 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ-ELVQDV 125
+ E+F A+ P+A RE VP++TW ++G L+ V+ EL +VQ +
Sbjct: 503 IKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553
Score = 86 (35.3 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 90 PSALRETI-VEVPNITWEDIGGLEGV-KRELQELVQDVDLNYIAK--VTNGFSGADLTEI 145
P L +++ +E+PN T E + ++ + K L DVD I + N FSGADL +
Sbjct: 689 PGRLDKSLFIELPN-TEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAAL 747
Query: 146 CQRACKLAIRQSI--ETEIRREREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFA 203
+ + LA+++ EI+ + ++ E+ V T + F A+R
Sbjct: 748 VRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIV---TMSDFRSALRKI 804
Query: 204 RRSVNDADIRKYE 216
+ SV+D D KY+
Sbjct: 805 KPSVSDKDRLKYD 817
Score = 75 (31.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQD--VDLNYIAKVTNGFSGADLTEICQRACK 151
RE + VPN ++ L +K+ L D +D +AK+T GF GADL + A
Sbjct: 371 REICLNVPN----EVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGT 426
Query: 152 LAIRQSIETEIRREREKLAGNPAASAAMETED 183
AI++ +T + ++ ME ++
Sbjct: 427 CAIKRIFQTYANIKSTPTTATDSSEDNMEIDE 458
Score = 43 (20.2 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
VTM +FR A+ K PS + ++ + + +G E +K + +E+ Q
Sbjct: 792 VTMSDFRSALRKIKPSVSDKDRLKYDRLN-KKMGLTEEMK-DAEEMKQ 837
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 241 (89.9 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HPE F + G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 636 WPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 695
Query: 65 SEANVRDIFDK 75
SE VR+IF K
Sbjct: 696 SERAVREIFRK 706
Score = 204 (76.9 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ P RGVL YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 363 PLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 422
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 423 EARLRQIFAEATLRH 437
Score = 136 (52.9 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+++F M PSA+RE V+VPN++W DIGGLE VK +L++ V+
Sbjct: 587 KITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVE 635
Score = 82 (33.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + VPN + + L+ + R + L+ + +L +A +G+ GADL +C A A
Sbjct: 508 KEIEIGVPNAQ-DRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHA 566
Query: 154 IRQSIETEIRREREKLAG 171
+R+ + + K+AG
Sbjct: 567 LRRVLRRQPNLPDSKMAG 584
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 241 (89.9 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HPE F + G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 639 WPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 698
Query: 65 SEANVRDIFDK 75
SE VR+IF K
Sbjct: 699 SERAVREIFRK 709
Score = 205 (77.2 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 35/75 (46%), Positives = 54/75 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ P RGVL YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 366 PLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 425
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 426 EARLRQIFAEATLRH 440
Score = 134 (52.2 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+++F M PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 590 KITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVE 638
Score = 83 (34.3 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + VPN + + L+ + R + L+ + +L +A +G+ GADL +C A A
Sbjct: 511 KEIEIGVPNAQ-DRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYA 569
Query: 154 IRQSIETEIRREREKLAG 171
+R+ + + K+AG
Sbjct: 570 LRRVLRKQPNLPDSKVAG 587
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 224 (83.9 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 324 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 383
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 384 ERAVRQVFQR 393
Score = 108 (43.1 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 275 IELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 317
Score = 58 (25.5 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+++ HFEEA + R S++ D YE ++L +
Sbjct: 546 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 580
Score = 53 (23.7 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 42 ANECQANFISVKGPELLTMWFGESEANVRDIFDK 75
+ E + V PE+++ GESE +R++F++
Sbjct: 43 SRELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 76
Score = 44 (20.5 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L IA + ++GADL+ + + A A+RQ +
Sbjct: 497 DVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 533
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 251 (93.4 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 44/70 (62%), Positives = 56/70 (80%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E PEKF G++PS G+L +GPPGCGKTL+AKA+AN +ANFIS+KGPELL + GES
Sbjct: 524 PIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGES 583
Query: 66 EANVRDIFDK 75
E NVR +F +
Sbjct: 584 EYNVRQLFSR 593
Score = 137 (53.3 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ E++ + G +P +L +GP G GKT + +A+A+ Q F+ V L++ GES
Sbjct: 216 PLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQCAFVPVSATSLVSGISGES 275
Query: 66 EANVRDIFDK 75
E N+R+ FD+
Sbjct: 276 EKNIREAFDE 285
Score = 99 (39.9 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ-ELVQD 124
+ N DI +T + + A+ + P+A RE VPN TW ++G L+ V+++L+ +VQ
Sbjct: 467 DQNDEDIC--ITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQP 524
Query: 125 VD 126
++
Sbjct: 525 IE 526
Score = 64 (27.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 119 QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA-GNPA 174
+ L DVD +A++T G+ GADL A A+ +I R +A G+P+
Sbjct: 382 KRLSDDVDFTALARLTPGYVGADLATAVDFAASEAMMAVYTAKISRLTAAVATGSPS 438
Score = 60 (26.2 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 153 AIRQSIETEIRRER-EKLAGNP------AASAAMETEDEDDPVPEITRAHFEEAMRFARR 205
A+R++IE R R K G AAS A +DD P I+ +E A+ +
Sbjct: 698 AVRKTIERVARDPRCGKFTGADLRQLLTAASEACMIRVQDDEAPMISEEDWERALDEVKP 757
Query: 206 SVNDADIRKY 215
SV D D KY
Sbjct: 758 SVKDID--KY 765
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 201 (75.8 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 37/70 (52%), Positives = 48/70 (68%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E E F + G+ +GVL YGPPGC KTL AKA+A E NF++VKGPE+ + GES
Sbjct: 535 PLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGES 594
Query: 66 EANVRDIFDK 75
E +R+IF K
Sbjct: 595 ERAIREIFRK 604
Score = 185 (70.2 bits), Expect = 6.9e-24, Sum P(3) = 6.9e-24
Identities = 30/70 (42%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P F FG+ P RG+L +GPPG GKT+L + +AN A+ +++ GP +++ + GE+
Sbjct: 264 PLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGET 323
Query: 66 EANVRDIFDK 75
EA +RDIF++
Sbjct: 324 EAALRDIFNE 333
Score = 123 (48.4 bits), Expect = 6.9e-24, Sum P(3) = 6.9e-24
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 65 SEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
++AN+ KVT+++ AM PSA+RE +E+P + W DIGG E +K +++E++Q
Sbjct: 475 TDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQ 533
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 127 LNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
+ YIA T+G+ GADLT +C+ + I++ + T+ ++ L
Sbjct: 442 IKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSL 484
Score = 71 (30.1 bits), Expect = 6.9e-24, Sum P(3) = 6.9e-24
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET---EIRREREKLAG 171
VDL+ +A T G+SGA++ +CQ A AI + ++ E+R + G
Sbjct: 707 VDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKG 756
Score = 52 (23.4 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 184 EDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFA 219
ED V ++ HFE+A + R + + YE FA
Sbjct: 738 EDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFA 773
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 227 (85.0 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 44/70 (62%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV PE+F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 599 PVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 658
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 659 ERAVRQVFQR 668
Score = 165 (63.1 bits), Expect = 9.1e-19, Sum P(4) = 9.1e-19
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G P RGVL +GPPGCGKTLLA AIA E + V E+++ GESE
Sbjct: 278 MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESE 337
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 338 QKLRELFEQ 346
Score = 102 (41.0 bits), Expect = 9.1e-19, Sum P(4) = 9.1e-19
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ +F A+ PSA RE V VP++TW DIG LE ++ EL
Sbjct: 550 IEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREEL 592
Score = 71 (30.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L + ++A +T GF GADL +C+ A
Sbjct: 422 REICLGIPDEASRERI--LQTLCRKLR-LPETFPFRHLAHLTPGFVGADLMALCREAAMC 478
Query: 153 AIRQSIET-EIRREREKLAGNPAASAAMETEDEDDPVPE 190
A+ + + T + ++ + G + E +P E
Sbjct: 479 AVSRVLMTLQEQQPTDPEMGTLPSKGGQEDRVGTEPASE 517
Score = 58 (25.5 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTL 222
++++ HFEEA + + S++ D YE Q+L
Sbjct: 821 KVSQKHFEEAFKKVKSSISKKDQVMYEALRQSL 853
Score = 46 (21.3 bits), Expect = 8.4e-24, Sum P(3) = 8.4e-24
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L +A + +SGADL+ + + A A+RQ +
Sbjct: 772 DVNLEALAADLRCDCYSGADLSALVREASICALRQEM 808
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 224 (83.9 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 483 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 542
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 543 ERAVRQVFQR 552
Score = 176 (67.0 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 167 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 226
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 227 QKLRELFEQ 235
Score = 108 (43.1 bits), Expect = 4.8e-21, Sum P(4) = 4.8e-21
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 434 IELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 476
Score = 79 (32.9 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L Q D ++A +T GF GADL +C+ A
Sbjct: 311 REICLGIPDEASRERI--LQTLCRKLR-LPQAFDFCHLAHLTPGFVGADLMALCREAAMC 367
Query: 153 AIRQ---SIETEIRR--EREKLAGNPAASAAMETEDEDDPVPEITR 193
A+ + ++ + ++ E E L + TE + E+ R
Sbjct: 368 AVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQR 413
Score = 58 (25.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+++ HFEEA + R S++ D YE ++L +
Sbjct: 705 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 739
Score = 44 (20.5 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L IA + ++GADL+ + + A A+RQ +
Sbjct: 656 DVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 692
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 237 (88.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 47/70 (67%), Positives = 53/70 (75%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E PE F K GM+ G+LFYGPPG GKTLLAKAIA E NF SVKGPELL M+ GES
Sbjct: 1044 PLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGES 1102
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 1103 EANVRRVFQR 1112
Score = 76 (31.8 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 111 LEGVKRELQELVQDVDLNYIA-KVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
LE + R+ L D+ L ++ ++ ++GADL +C A AI + T + + ++L
Sbjct: 1208 LEALTRKFA-LAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRKA-TAVDEKIKQL 1265
Query: 170 AGNPAASAAM--ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQS 225
G P ++A DD +T F A SV+ ++ +E Q + +
Sbjct: 1266 PGGPVSTAYFFDHLSTPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFERIRQMFEST 1323
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 224 (83.9 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 600 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 659
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 660 ERAVRQVFQR 669
Score = 176 (67.0 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 284 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 343
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 344 QKLRELFEQ 352
Score = 108 (43.1 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 551 IELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 593
Score = 79 (32.9 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L Q D ++A +T GF GADL +C+ A
Sbjct: 428 REICLGIPDEASRERI--LQTLCRKLR-LPQAFDFCHLAHLTPGFVGADLMALCREAAMC 484
Query: 153 AIRQ---SIETEIRR--EREKLAGNPAASAAMETEDEDDPVPEITR 193
A+ + ++ + ++ E E L + TE + E+ R
Sbjct: 485 AVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQR 530
Score = 58 (25.5 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+++ HFEEA + R S++ D YE ++L +
Sbjct: 822 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 856
Score = 44 (20.5 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L IA + ++GADL+ + + A A+RQ +
Sbjct: 773 DVNLEAIAGDLRCDCYTGADLSALVREASICALRQEM 809
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 231 (86.4 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H + F G++ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GES
Sbjct: 677 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 735
Query: 66 EANVRDIFDK 75
E NVRDIF+K
Sbjct: 736 EKNVRDIFEK 745
Score = 75 (31.5 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 111 LEGVKRELQELVQDVDLNYIAK-VTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L+ + R+ + L +DV L +AK + F+GAD+ +C A A ++ +
Sbjct: 838 LKALTRKFK-LSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKV----------- 885
Query: 170 AGNPAASAAMETEDEDDPVPEITR-AHFEEAMRFARRSVNDADIRKYEMFAQTLQ 223
+ + S M TE EDDP + F +AM S++ +++KYEM Q
Sbjct: 886 --SKSDSGDMPTE-EDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQ 937
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 233 (87.1 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 43/68 (63%), Positives = 52/68 (76%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE + G+ GVL +GPPGCGKTLLAKA+ANE +ANFISVKGPELL + GES
Sbjct: 488 PIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGES 547
Query: 66 EANVRDIF 73
E VR +F
Sbjct: 548 ERAVRQVF 555
Score = 169 (64.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ +L +QP RGVL +GPPGCGKT++A A A E FIS+ P +++ GES
Sbjct: 184 PMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGES 243
Query: 66 EANVRDIFDK 75
E +R+ F++
Sbjct: 244 EKALREHFEE 253
Score = 98 (39.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQD 124
V+ ++F A+ K PS+ RE +P+ TW DIG L G++ EL + D
Sbjct: 439 VSNDDFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVD 487
Score = 82 (33.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 111 LEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA 170
L + R+++ LV D+D +AK T GF GADL ++ A AI++ ++ L
Sbjct: 346 LRALTRKMR-LVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDL--------LK 396
Query: 171 GNPAASAAMETEDEDDP-VPEITR--AHFEE 198
N +E +D+ P V E+ R H +E
Sbjct: 397 SNSGEEMDIEGQDDLSPSVKELRRLITHAKE 427
Score = 68 (29.0 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 90 PSALRETI--VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L ET+ V +P+ E + L+ + R L + + DL +A+ GFSGADLT + +
Sbjct: 626 PGRL-ETLLFVNLPS-PLERVEILQTLVRRLP-IEFNEDLRRLAEECEGFSGADLTSLLR 682
Query: 148 RACKLAIRQ 156
RA AI++
Sbjct: 683 RAGYNAIKR 691
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 252 (93.8 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 56/123 (45%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +P+K+ G+ GVL YGPPGCGKTLLAKAIA+ECQANFISVKGPELL + GES
Sbjct: 585 PIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGES 644
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSAL--RETIVEVPNITWEDIGGLEGVKRELQELVQ 123
E VR +F + SSP + E P D GG + +R + +L+
Sbjct: 645 ERAVRQVFQRAAA---------SSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLT 695
Query: 124 DVD 126
++D
Sbjct: 696 EMD 698
Score = 182 (69.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+ HPE + G++P RG+L +GP GCGKTLLAKAIA E + ++ E+ + GE
Sbjct: 234 YPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGE 293
Query: 65 SEANVRDIF 73
SEA VR +F
Sbjct: 294 SEARVRTLF 302
Score = 110 (43.8 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ M +F+ A+ K P+A RE +PN+TW+D+G L GV+ EL
Sbjct: 536 IEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREEL 578
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 74 DKVTMENFRYAMGKSSPSALRE 95
D VTME+F +A+ K PS R+
Sbjct: 802 DTVTMEDFIFALSKIKPSVSRK 823
Score = 49 (22.3 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 123 QDVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSIE 159
QDVDL + + FSGADL+ + + A AI + +
Sbjct: 757 QDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFD 795
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L + D IA +T G+ GAD+ + + A ++ +
Sbjct: 452 LENNFDYEEIATLTPGYVGADINLLVKEAATNSVNR 487
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 237 (88.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 58/170 (34%), Positives = 96/170 (56%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HP+ F + G+QP +GVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GE
Sbjct: 645 WPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGE 704
Query: 65 SEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVK-RELQELVQ 123
SE VR++F K A+ +PS + ++ + G V R L +L+
Sbjct: 705 SERAVREVFRKAR------AV---APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLT 755
Query: 124 DVD-LNYIAKVT-----NGFSGAD-LTEICQRACKLAIRQSIETEIRRER 166
++D + + VT N D + +C+ A LA+ ++I+ + +R
Sbjct: 756 EMDGIEQLKNVTVLAATNRPDRIDKIIAVCKEAALLALEENIKADCIMKR 805
Score = 193 (73.0 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ PE F +G+ RG+L YGPPG GKT++A+A+ANE A + GPE+++ ++GE+
Sbjct: 372 PLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGET 431
Query: 66 EANVRDIFDKVTMEN 80
EA +R IF + T+ +
Sbjct: 432 EARLRQIFAEATLRH 446
Score = 133 (51.9 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
K+T+ +F M PSA+RE ++VPN++W DIGGLE +K +L++ V+
Sbjct: 596 KITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVE 644
Score = 77 (32.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + +PN + + L+ + R + L+ +L +A +G+ GADL +C A A
Sbjct: 517 KEIEIGIPNAQ-DRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYA 575
Query: 154 IRQSIETEIRREREKLAG 171
+R+ + + K+AG
Sbjct: 576 LRRVLRKQPNLPDSKVAG 593
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 216 (81.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ H E F + G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GE
Sbjct: 566 WPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGE 625
Query: 65 SEANVRDIFDK 75
SE VR +F K
Sbjct: 626 SERAVRQVFQK 636
Score = 173 (66.0 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F F + P RGVL YGPPG GKT++ +A+A E A ++ GP ++ + GE+
Sbjct: 298 PFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGET 357
Query: 66 EANVRDIFD 74
E+ +R IF+
Sbjct: 358 ESRLRKIFE 366
Score = 126 (49.4 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 71 DIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
DIF V M++ +A+ SA+RE ++E PN+ W DIGG E VK++L+E V+
Sbjct: 513 DIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVE 565
Score = 94 (38.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 114 VKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-EIRREREKLA 170
++ E + +DVDL+ IA+ T G SGA++ +CQ A +A+ + +E EI + K A
Sbjct: 725 IQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTA 782
Score = 68 (29.0 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 28/115 (24%), Positives = 54/115 (46%)
Query: 111 LEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA 170
L GV E + D L +A T+ + GADL + + A AI+++I ++++ L
Sbjct: 460 LSGVPNE----INDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTIS--LQKDTSGLD 513
Query: 171 GNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQS 225
A++ +D + + + ++ E M +V+ +DI E Q L++S
Sbjct: 514 ----IFGAVQMDDLEFALSSVRQSAMREFM-MESPNVHWSDIGGQEEVKQKLKES 563
Score = 56 (24.8 bits), Expect = 6.0e-21, Sum P(3) = 6.0e-21
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 148 RACKLAIRQSIETEIRRER-EKLAGNPAASAAMETE----DEDDPVPEITRAHFEEAMRF 202
+A K+ + ++ ++ E+ E +G + E ED EI +AHF+ A+
Sbjct: 726 QAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLA 785
Query: 203 ARRSVNDADIRKYEMFAQTL 222
R+++ + Y F++++
Sbjct: 786 LRKAITRDMLEYYASFSESV 805
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 227 (85.0 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 44/70 (62%), Positives = 50/70 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV PE+F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 594 PVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 653
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 654 ERAVRQVFQR 663
Score = 165 (63.1 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G P RGVL +GPPGCGKTLLA AIA E + V E+++ GESE
Sbjct: 278 MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESE 337
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 338 QKLRELFEQ 346
Score = 102 (41.0 bits), Expect = 4.6e-17, Sum P(4) = 4.6e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ +F A+ PSA RE V VP++TW DIG LE ++ EL
Sbjct: 545 IEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREEL 587
Score = 71 (30.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L + ++A +T GF GADL +C+ A
Sbjct: 422 REICLGIPDEASRERI--LQTLCRKLR-LPETFPFRHLAHLTPGFVGADLMALCREAAMC 478
Query: 153 AIRQSIET-EIRREREKLAGNPAASAAMETEDEDDPVPE 190
A+ + + T + ++ + G + E +P E
Sbjct: 479 AVSRVLMTLQEQQPTDPEMGTLPSKGGQEDRVGTEPASE 517
Score = 46 (21.3 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L +A + +SGADL+ + + A A+RQ +
Sbjct: 767 DVNLEALAADLRCDCYSGADLSALVREASICALRQEM 803
Score = 41 (19.5 bits), Expect = 4.6e-22, Sum P(3) = 4.6e-22
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 190 EITRAHFEEAMRFARRSVN 208
++++ HFEEA + + S++
Sbjct: 816 KVSQKHFEEAFKKVKSSIS 834
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 242 (90.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 41/74 (55%), Positives = 58/74 (78%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HP+ F++ G+QP +GVL YGPPGC KT++AKA+A+E NF++VKGPEL+ + GE
Sbjct: 610 WPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGE 669
Query: 65 SEANVRDIFDKVTM 78
SE VR+IF K M
Sbjct: 670 SERAVREIFRKARM 683
Score = 202 (76.2 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 36/73 (49%), Positives = 53/73 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ E F +G+ P RGVL YGPPG GKTL+AKAIANE A+ + GPE+++ ++GES
Sbjct: 337 PLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGES 396
Query: 66 EANVRDIFDKVTM 78
E+ +R IF + ++
Sbjct: 397 ESRLRQIFAEASL 409
Score = 114 (45.2 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
+ +F M PSA+RE V+VP ++W DIGGLE VK +L++ V+
Sbjct: 562 IAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVE 609
Score = 68 (29.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 16/79 (20%), Positives = 41/79 (51%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
+E + +PN + + L+ + +++ + ++ +A +G+ GADL +C+ A A
Sbjct: 482 KEIEIGIPNAQ-DRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYA 540
Query: 154 IRQSIETEIRREREKLAGN 172
+R+++ ++AG+
Sbjct: 541 LRRALGKRAHPSDTEVAGS 559
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 216 (81.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P +H + F + G +P G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL + W GE
Sbjct: 742 WPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGE 801
Query: 65 SEANVRDIFDK 75
SE VR +F K
Sbjct: 802 SEKAVRSLFAK 812
Score = 157 (60.3 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 17 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIF 73
G++P++GVL +GPPG GKT LA+ A NF SV GPE+++ + GESE + ++F
Sbjct: 414 GLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVF 470
Score = 124 (48.7 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
V E+F A K PSA+RE I+EVP + WED+GG VK +L E V+
Sbjct: 694 VGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVE 741
Score = 89 (36.4 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 90 PSAL-RETIVEVPNITWE-DIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L RE + VP+ T DI L + R ++ + ++ + +A T+GF GADL+ +C
Sbjct: 540 PGRLDREIEIGVPSSTQRSDI--LHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCC 597
Query: 148 RACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
A + +R+ ++ L P A ++ D
Sbjct: 598 EAAFVCLRRHLDQSSSSSNLPLEEAPIAESSSNMSD 633
Score = 85 (35.0 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETE 161
D+ L +A +T G++GAD++ IC+ A A+ +S+E E
Sbjct: 915 DICLKELASITKGYTGADISLICREAAIAALEESLEME 952
Score = 37 (18.1 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 141 DLTEICQRACKLAIRQSIETEI 162
++ EI R K AI Q TEI
Sbjct: 950 EMEEISMRHLKAAISQIEPTEI 971
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 212 (79.7 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 41/72 (56%), Positives = 51/72 (70%)
Query: 5 YPVEHPEKFLKFGMQ-PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+ G
Sbjct: 551 YPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVG 610
Query: 64 ESEANVRDIFDK 75
ESE VR +F +
Sbjct: 611 ESERAVRTVFQR 622
Score = 148 (57.2 bits), Expect = 5.7e-18, Sum P(4) = 5.7e-18
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
++ P+ F G+ P RG + +GPPGCGKT+ A+A+A E + + EL++ GE+E
Sbjct: 225 LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETE 284
Query: 67 ANVRDIFD 74
+R +FD
Sbjct: 285 EKIRRLFD 292
Score = 96 (38.9 bits), Expect = 5.7e-18, Sum P(4) = 5.7e-18
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ 119
+++ E+F A+ P+A RE VP+++W+DIG L V+++L+
Sbjct: 502 QISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLE 546
Score = 82 (33.9 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-EIRREREK 168
L DV L IAK+T G+ GADL + + A K+AI + +T ++ E K
Sbjct: 419 LAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHK 467
Score = 65 (27.9 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 183 DEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ D+ V + HF EA R SV +AD +KYE
Sbjct: 764 ENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797
Score = 58 (25.5 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 121 LVQDVDLNYIAKVTN--GFSGADLTEICQRACKLAIRQSI 158
L +D+D + IA++ GF+GADL + + LA++ +
Sbjct: 723 LGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARV 762
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 212 (79.7 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 41/72 (56%), Positives = 51/72 (70%)
Query: 5 YPVEHPEKFLKFGMQ-PSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+ G
Sbjct: 551 YPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVG 610
Query: 64 ESEANVRDIFDK 75
ESE VR +F +
Sbjct: 611 ESERAVRTVFQR 622
Score = 148 (57.2 bits), Expect = 5.7e-18, Sum P(4) = 5.7e-18
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
++ P+ F G+ P RG + +GPPGCGKT+ A+A+A E + + EL++ GE+E
Sbjct: 225 LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETE 284
Query: 67 ANVRDIFD 74
+R +FD
Sbjct: 285 EKIRRLFD 292
Score = 96 (38.9 bits), Expect = 5.7e-18, Sum P(4) = 5.7e-18
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ 119
+++ E+F A+ P+A RE VP+++W+DIG L V+++L+
Sbjct: 502 QISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLE 546
Score = 82 (33.9 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-EIRREREK 168
L DV L IAK+T G+ GADL + + A K+AI + +T ++ E K
Sbjct: 419 LAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHK 467
Score = 65 (27.9 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 183 DEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ D+ V + HF EA R SV +AD +KYE
Sbjct: 764 ENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797
Score = 58 (25.5 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 121 LVQDVDLNYIAKVTN--GFSGADLTEICQRACKLAIRQSI 158
L +D+D + IA++ GF+GADL + + LA++ +
Sbjct: 723 LGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARV 762
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 237 (88.5 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 47/70 (67%), Positives = 53/70 (75%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E PE F K GM+ G+LFYGPPG GKTLLAKAIA E NF SVKGPELL M+ GES
Sbjct: 1015 PLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGES 1073
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 1074 EANVRRVFQR 1083
Score = 54 (24.1 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 49/196 (25%), Positives = 77/196 (39%)
Query: 111 LEGVKRELQELVQDVDLNYIA-KVTNGFSGADLTEICQRACKLAI-RQS--IETEIRR-- 164
+E + R+ L V L +A K+ ++GAD +C A A+ RQ+ ++ +I+
Sbjct: 1179 MEALTRKFT-LHPSVSLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQASHVDAKIKAMS 1237
Query: 165 -EREKLAGNPAASAAMET-EDEDDPVPE--ITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
ER++ T ED D V E + AH EE + SV+ ++ YE
Sbjct: 1238 AERQQEITTAYFFDHFATPEDIDVMVTEEDLLAAH-EEMIP----SVSAGELAHYERVRA 1292
Query: 221 TL---------QQSRGFGTNFRFPSNPNQSQSGGPNSAPANESGTGGILLMFPSNPNQSQ 271
T QQ + R S + + G A S +GG N
Sbjct: 1293 TFEGGRDKQQQQQQQRKDLGARTVSGASSVKGKGKGKGKAIASSSGGEEEDRQDGVNGKA 1352
Query: 272 SGGPNSAPANESGTGG 287
+ G A A+ G+GG
Sbjct: 1353 NKGKGKAVASGYGSGG 1368
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 218 (81.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 39/68 (57%), Positives = 52/68 (76%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV++ + G+ S G+L YGPPGCGKT+LAKAI+NE +ANFI++KGPE+L + GES
Sbjct: 695 PVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVGES 754
Query: 66 EANVRDIF 73
E VR+IF
Sbjct: 755 EKKVREIF 762
Score = 86 (35.3 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
Y + +P KF + + +G G GKT L+ AIA EC F +K PE + +
Sbjct: 270 YSIIYPYKFRLSNLNCIINI--FGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIKYISND 327
Query: 65 SEAN-VRDIFDKVTME 79
++ N +R +F+ + E
Sbjct: 328 NKNNKLRILFEHIKNE 343
Score = 61 (26.5 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 95 ETIVEVPNITWEDIGGLEGVKRELQ 119
E I EVPNI ++IG L+ +K+ L+
Sbjct: 665 ENICEVPNINLDNIGSLKKIKKILE 689
Score = 59 (25.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
++V I+K+T G+SGADL + + + +A+++
Sbjct: 865 KNVRFEEISKLTRGYSGADLYGVLRESAFIALQE 898
Score = 43 (20.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 191 ITRAHFEEAMRFARRSVNDADIRKYE 216
IT+ H +A++ RSV I+ Y+
Sbjct: 1168 ITQKHIIQAIKIIPRSVTKEQIKYYK 1193
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 196 (74.1 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+E + F G+ +GVL YGPPGC KTL AKA+A E NF++VKGPE+ + GES
Sbjct: 518 PLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGES 577
Query: 66 EANVRDIFDK 75
E +R+IF K
Sbjct: 578 ERAIREIFRK 587
Score = 175 (66.7 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 29/71 (40%), Positives = 50/71 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-QANFISVKGPELLTMWFGE 64
P+ +P F FG+ P RG+L +GPPG GKT+L + +AN +A+ +++ GP +++ + GE
Sbjct: 248 PLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGE 307
Query: 65 SEANVRDIFDK 75
+E +RDIF++
Sbjct: 308 TENAIRDIFNE 318
Score = 122 (48.0 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 75 KVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
KVT+++ +A+ + PSA+RE +E+P + W DIGG E +KR+L E+VQ
Sbjct: 468 KVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQ 516
Score = 81 (33.6 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 115 KRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIE 159
K LQ + VDL +A++T+G SGA++T +CQ A AI ++ E
Sbjct: 683 KFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKE 727
Score = 66 (28.3 bits), Expect = 7.2e-15, Sum P(3) = 7.2e-15
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 94 RETIVEVPNI-TWEDIGGLEGVKRELQEL-VQDVDLNYIAKVTNGFSGADLTEICQRACK 151
+E + +P++ E+I + K ++ + ++ IA T+G+ GADLT +C+ +
Sbjct: 392 QEVEIGIPDVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVM 451
Query: 152 LAIRQSIETEI 162
AI + + I
Sbjct: 452 KAINRGLTVGI 462
Score = 53 (23.7 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 184 EDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
E+ +T HFE A++ R + + YE F++
Sbjct: 724 ENKEATTVTNKHFEHALKGISRGITPEMLEYYEKFSK 760
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 199 (75.1 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ P+ + FG+ G L YGPPGCGKTL+AKA ANE ANF+ +KG ELL + GES
Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGES 606
Query: 66 EANVRDIFDK 75
E +R +F +
Sbjct: 607 ELAIRTLFQR 616
Score = 191 (72.3 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ +PE F K G++P G+LF+GPPGCGKT LA AIANE F + E+++ G
Sbjct: 251 FPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGA 310
Query: 65 SEANVRDIFDK 75
SE N+R++F K
Sbjct: 311 SEENIRELFSK 321
Score = 103 (41.3 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVT-NGFSGADLTEICQRACKLAIRQ 156
V +PN E L+ + R+ + + VDL+ IAK GFSGADL + Q+A A+
Sbjct: 692 VPLPNAD-ERASILKAIARK-KPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV-- 747
Query: 157 SIETEIRREREKLAGNPAASAAMETEDEDDPVPEIT--RAHFEEAMRFARRSVNDADIRK 214
E++ G+ +S ED+ + + T HFE+A+ SVN R
Sbjct: 748 ----------EEMIGSSESS-----EDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRH 792
Query: 215 YEMFAQTLQQSRGFGT 230
Y+ + LQ+S G T
Sbjct: 793 YDALSTKLQESVGRNT 808
Score = 76 (31.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELV 122
E + +F V M +F A+ S RE VP++ W+D+GGL+ ++ + +
Sbjct: 490 EEELEKLF--VKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYI 544
Score = 71 (30.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 126 DLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAAS-AAMETEDE 184
D IA++T GF GADL + A + AI++ +++ R+ + G S M +E
Sbjct: 434 DKKRIARLTPGFVGADLESVAYLAGRKAIKRILDS--RKSEQSGDGEDDKSWLRMPWPEE 491
Query: 185 DDPVPEITRAHFEEAMRFARRSV 207
+ + + FEEA+ + S+
Sbjct: 492 ELEKLFVKMSDFEEAVNLVQASL 514
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 211 (79.3 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 39/73 (53%), Positives = 50/73 (68%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P ++P+ F ++ G+L YGP GCGKTLLA AIA EC NFISVKGPELL + G
Sbjct: 884 WPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGS 943
Query: 65 SEANVRDIFDKVT 77
SE VRD+F + +
Sbjct: 944 SEQGVRDVFSRAS 956
Score = 68 (29.0 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 172 NPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFGTN 231
N S ++ ++ P IT++H + A++ + S+++++ +KYE + RG T
Sbjct: 1156 NSNTSTLNKSNLSNEQPPLITQSHIDLALKESSPSISESERKKYERIYNNFLKERGSVTG 1215
Query: 232 FRFPSNPNQS 241
+ P Q+
Sbjct: 1216 NKKEGVPKQT 1225
Score = 49 (22.3 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 90 PSALRETIV-EVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQR 148
P L +++ +P E + L +K ++ L + L ++ T ++GADL +
Sbjct: 1022 PGRLDKSLYCNIPEFN-ERLDILTCLKSKMN-LSPSISLEQLSTNTQYYTGADLRALMYN 1079
Query: 149 ACKLAIRQ---SIETEIRREREKLAGNPAASAAMETED 183
A +I + +E E +R+R++ +++ + +D
Sbjct: 1080 AQLKSIHEWMNHLEEEKKRKRKEKEDQSNKNSSQQQDD 1117
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 226 (84.6 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 834 PLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGES 892
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 893 EANVRRVFQR 902
Score = 46 (21.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 111 LEGVKRELQELVQDVDLNYIA-KVTNGFSGADLTEIC 146
LE + R+ + L +V+L +A K + F+GAD +C
Sbjct: 996 LEALTRKFK-LDDNVNLEQVAAKCSFTFTGADFYALC 1031
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 226 (84.6 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 44/70 (62%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G++ G+LFYGPPG GKTLLAKAIA NF SVKGPELL M+ GES
Sbjct: 834 PLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGES 892
Query: 66 EANVRDIFDK 75
EANVR +F +
Sbjct: 893 EANVRRVFQR 902
Score = 46 (21.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 111 LEGVKRELQELVQDVDLNYIA-KVTNGFSGADLTEIC 146
LE + R+ + L +V+L +A K + F+GAD +C
Sbjct: 996 LEALTRKFK-LDDNVNLEQVAAKCSFTFTGADFYALC 1031
>TAIR|locus:2034230 [details] [associations]
symbol:ERH3 "ECTOPIC ROOT HAIR 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043622 "cortical microtubule organization" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0009832 GO:GO:0005874 GO:GO:0043622 GO:GO:0009825
GO:GO:0010091 EMBL:AC018848 KO:K07767 HAMAP:MF_03023
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:AF358779 EMBL:AF359248
EMBL:AF048706 EMBL:AB044785 EMBL:AY059919 EMBL:BT000149
IPI:IPI00547205 PIR:B96835 RefSeq:NP_178151.1 UniGene:At.11879
ProteinModelPortal:Q9SEX2 SMR:Q9SEX2 IntAct:Q9SEX2 STRING:Q9SEX2
PaxDb:Q9SEX2 PRIDE:Q9SEX2 EnsemblPlants:AT1G80350.1 GeneID:844375
KEGG:ath:AT1G80350 GeneFarm:2769 TAIR:At1g80350 InParanoid:Q9SEX2
PhylomeDB:Q9SEX2 ProtClustDB:CLSN2691706 BRENDA:3.6.4.3
Genevestigator:Q9SEX2 GermOnline:AT1G80350 Uniprot:Q9SEX2
Length = 523
Score = 167 (63.8 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 35/69 (50%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F +P +GVL +GPPG GKTLLAKA+A EC F +V L + W GES
Sbjct: 258 PLWMPEYFQGI-RRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGES 316
Query: 66 EANVRDIFD 74
E VR +FD
Sbjct: 317 ERMVRCLFD 325
Score = 127 (49.8 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 65 SEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQD 124
+E R I + NF + + ++ L + I +P +E L + E+ D
Sbjct: 376 NEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIY-IPLPDFESRKALININLRTVEVASD 434
Query: 125 VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDE 184
V++ +A+ T G+SG DLT +C+ A +R+ I + R E + ++ + +
Sbjct: 435 VNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMS---------KDDIS 485
Query: 185 DDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+DPV FEEA+R + SV+ +DI K+E
Sbjct: 486 NDPV---AMCDFEEAIRKVQPSVSSSDIEKHE 514
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 152 (58.6 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 10 PEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 69
PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GESE V
Sbjct: 4 PE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLV 62
Query: 70 RDIFD 74
R +F+
Sbjct: 63 RLLFE 67
Score = 129 (50.5 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 104 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 162
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DVDL IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 163 -LRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 220
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 221 SKE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 254
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 216 (81.1 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L YGPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 815 PLEHPE-LLSLGLRRS-GLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQS 872
Query: 66 EANVRDIFDK 75
E N+R + K
Sbjct: 873 EENIRQVSSK 882
Score = 49 (22.3 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 181 TEDEDDPVPEITRAH--FEEAMRFARRSVNDADIRKYEMFAQTL 222
TE D + +T F EA+ + SV++ I +Y++ Q L
Sbjct: 1025 TEGVDSELSSLTLCSEDFSEALSGLQPSVSEQQISRYQLLQQKL 1068
Score = 43 (20.2 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 138 SGADLTEICQRACKLAIRQSI 158
+GADL +C A A+++ I
Sbjct: 1001 TGADLYSLCSDAMMCAVKRKI 1021
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 201 (75.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 49/123 (39%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A A+FI V G E + + GE
Sbjct: 180 PLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEG 239
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN SPS + I E+ I + G RE+Q ++ ++
Sbjct: 240 PRMVRDVF-RLAKEN--------SPSII--FIDEIDAIATKRFDAQTGADREVQRILLEL 288
Query: 126 DLN 128
LN
Sbjct: 289 -LN 290
Score = 74 (31.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGN 172
L DVDL +++A+ + SGAD+ ICQ A A+R++ + ++ EK N
Sbjct: 350 LSDDVDLEDWVAR-PDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKN 401
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 212 (79.7 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 9 HPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 68
+P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GESE
Sbjct: 602 NPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERA 661
Query: 69 VRDIFDK 75
VR +F +
Sbjct: 662 VRQVFQR 668
Score = 167 (63.8 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V E+++ GESE
Sbjct: 283 MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESE 342
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 343 QKLRELFEQ 351
Score = 104 (41.7 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE VPN+TW DIG LE ++ EL
Sbjct: 550 IELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREEL 592
Score = 84 (34.6 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 31/110 (28%), Positives = 56/110 (50%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L + ++A +T GF GADL +C+ A
Sbjct: 427 REICLGIPDEASRERI--LQTLCRKLR-LPETFHFRHLAHLTPGFVGADLMALCREAAMC 483
Query: 153 AIRQSIETEIRREREKLAGNPAASAAMETEDEDDPV-PEITRAHFEEAMR 201
A+ + + E++ + +K NP A+ D+++ E T EE R
Sbjct: 484 AVNRVL-MELQGQHKK---NPEIEASPSEGDQEERTGAEPTSKTQEELQR 529
Score = 55 (24.4 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 190 EITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
+I++ HFEEA + + S++ D YE +L +
Sbjct: 821 KISQKHFEEAFKKVKSSISKEDRAMYEALQWSLSR 855
Score = 41 (19.5 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 124 DVDLNYIAKVT--NGFSGADLTEICQRACKLAIRQSI 158
DV+L IA + ++GADL+ + + A A++Q +
Sbjct: 772 DVNLEAIAGDLRCDCYTGADLSALVREASICALKQEM 808
>TAIR|locus:4010714050 [details] [associations]
symbol:AT5G52882 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 IPI:IPI00785844 RefSeq:NP_001078747.1
UniGene:At.23894 ProteinModelPortal:F4KHN5 SMR:F4KHN5 PRIDE:F4KHN5
EnsemblPlants:AT5G52882.1 GeneID:5008305 KEGG:ath:AT5G52882
OMA:LESERFY Uniprot:F4KHN5
Length = 829
Score = 186 (70.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F ++P RG+L +GPPG GKT+LAKAIANE A+FI+V + + WFGE
Sbjct: 536 PLRRPDLFQGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGED 595
Query: 66 EANVRDIF 73
E NVR +F
Sbjct: 596 EKNVRALF 603
Score = 105 (42.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 112 EGVKREL--QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E + R L +E +++D + + ++T G+SG+DL +C A +R+ I+ E +++E+
Sbjct: 692 EKILRTLLSKEKTENLDFHELGQITEGYSGSDLKNLCITAAYRPVRELIQQERLKDQERK 751
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGFG 229
A E+++E+ A E R +N D+RK + S G G
Sbjct: 752 KREEAGKGTEESKEEE--------AEASEERVITLRPLNMEDMRKAKTQVAASFASEGAG 803
Query: 230 TN 231
N
Sbjct: 804 MN 805
Score = 53 (23.7 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 103 ITWEDIGGLEGVKRELQELV 122
+T+ DIG L+ K LQELV
Sbjct: 514 VTFADIGSLDETKDSLQELV 533
Score = 40 (19.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 21 SRGVLFYGPPGCGKTLLAKAIANECQANFI 50
S+ +L GP + +LAKA+++ ++ +
Sbjct: 103 SKAILLSGPAEFYQQMLAKALSHYFESKLL 132
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 168 (64.2 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++ P+ F + G+ +GVL YGP GC KT L KA+A C +F+SV G EL + + G+
Sbjct: 481 WPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGD 540
Query: 65 SEANVRDIF 73
SE + +F
Sbjct: 541 SEKILSQVF 549
Score = 164 (62.8 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 33/70 (47%), Positives = 40/70 (57%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P P F K G+ GVL GPPG GKTLL KA+A E A + + GP L GES
Sbjct: 216 PFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGES 275
Query: 66 EANVRDIFDK 75
E N+R +F+K
Sbjct: 276 EENLRSVFEK 285
Score = 95 (38.5 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 76 VTMENFRYAMGKSSPSALRETI--VEVPNITWEDIGGLEGVKRELQELVQ 123
+ M +F+ A K PS+ R I E ITWE IGGLE VK +L++ V+
Sbjct: 431 INMADFQEAFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVE 480
Score = 83 (34.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
RE I+ P +T + L+ + + + D+DL +A++T G+ GADLT +C+ A A
Sbjct: 361 REVIIGTPTLT-QRRSILQMLTCSMP-ISTDIDLVKLAEMTTGYVGADLTALCREAAMQA 418
Query: 154 IRQS 157
+ S
Sbjct: 419 VFHS 422
Score = 72 (30.4 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
DV L IA T+ FSGAD+ +C+ A LA++++
Sbjct: 674 DVSLQDIAARTDLFSGADIENLCKEAALLALQEN 707
Score = 41 (19.5 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 142 LTEICQRACKLAIRQSIETEIRREREKLAG----NPAASAAMETEDEDD-PVPEITRAHF 196
+ +IC L S++ +I + +G N AA+ E+ + HF
Sbjct: 661 ILKICTEKIPLDTDVSLQ-DIAARTDLFSGADIENLCKEAALLALQENGLEATAVKHGHF 719
Query: 197 EEAMRFARRSVNDADIRKYE-MFAQTL 222
++++ + S++ D+ YE +++Q L
Sbjct: 720 VKSLQTVKPSLSMKDLEFYEKIYSQEL 746
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 218 (81.8 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 314 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 371
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 372 EENVREVF 379
Score = 43 (20.2 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET-ED 183
+GADL +C A A+++ + ++ E P +SA M T ED
Sbjct: 500 TGADLYSLCSDAMTAALKRRVH-DLEEGLE-----PGSSALMLTMED 540
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 232 (86.7 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 45/70 (64%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F GM+ G+LFYGPPG GKTL+AKAIA NF SVKGPELL M+ GES
Sbjct: 751 PLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGES 809
Query: 66 EANVRDIFDK 75
EANVR +F K
Sbjct: 810 EANVRRVFQK 819
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 211 (79.3 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPEKF+K G+ P +GVL YGPPG GKTLLA+A+AN A FI V G EL+ + GE
Sbjct: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F + A K + + + + ++D +GG V+R + E+V
Sbjct: 247 ARMVRELF--------QMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQ 298
Query: 125 VD 126
+D
Sbjct: 299 LD 300
Score = 54 (24.1 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
+D+ +A++ +GAD+ +C A AIR +T ++
Sbjct: 359 RDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 232 (86.7 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 43/70 (61%), Positives = 53/70 (75%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHP F G+ G+L +GPPG GKTLLAKAIA EC NF+SVKGPEL+ M+ GES
Sbjct: 938 PLEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGES 996
Query: 66 EANVRDIFDK 75
E N+R+IF+K
Sbjct: 997 EKNIREIFNK 1006
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 218 (81.8 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 724 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 781
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 782 EENVREVF 789
Score = 48 (22.0 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 111 LEGVKRELQELVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L + R+ + L V L N + + +GADL +C A A+++ +R E L
Sbjct: 883 LSAITRKFK-LEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKR----RVRDLEEGL 937
Query: 170 AGNPAASAAMETEDE 184
P +S + T D+
Sbjct: 938 --EPGSSTLLLTMDD 950
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 155 (59.6 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 229 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 287
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 288 EKLVRLLFE 296
Score = 131 (51.2 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 55/167 (32%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 333 ELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 391
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DVDL IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 392 -LRINLREL-ELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 449
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ + M T ED FE A++ +SV+ ADI KYE
Sbjct: 450 SRD---EMHMPTTMED----------FEIALKKVSKSVSAADIEKYE 483
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 169 (64.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P+ PE F++ G+ RGVL YGPPGC KT L KA A+ +F S+ G EL + + G+
Sbjct: 470 WPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGD 529
Query: 65 SEANVRDIF 73
SE + +F
Sbjct: 530 SEKTLAQLF 538
Score = 159 (61.0 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 4 TYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
T+P+ +P + G+ RG+L GPPG GKTLL + +A + A ++V GPE+ G
Sbjct: 204 TFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPG 263
Query: 64 ESEANVRDIFDK 75
ESE N+R +F++
Sbjct: 264 ESEENLRRVFEQ 275
Score = 95 (38.5 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
RE I+ VP++ + L+ V RE+ L DVDLN +A++T G+ GADL+ + + A A
Sbjct: 351 REVIIGVPSLL-QRRSILKCVCREMP-LSPDVDLNTLAEMTCGYVGADLSALSREAALQA 408
Query: 154 IRQS 157
+R S
Sbjct: 409 MRHS 412
Score = 91 (37.1 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 74 DKVTMENFRYAMGKSSPSALRETI--VEVPNITWEDIGGLEGVKRELQELVQ 123
+ V+M++F A+ PS LR +I + I WE IGGLE VK +L++ ++
Sbjct: 418 EPVSMQHFMQALRHVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIE 469
Score = 78 (32.5 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L QDV L +A T FSGADL +C+ A LA+R+
Sbjct: 675 LHQDVCLEDLAAQTELFSGADLENLCKEAALLALRE 710
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/70 (61%), Positives = 51/70 (72%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GES
Sbjct: 494 PVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES 553
Query: 66 EANVRDIFDK 75
E VR +F +
Sbjct: 554 ERAVRQVFQR 563
Score = 176 (67.0 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ HPE + G+ P RGVL +GPPGCGKTLLA AIA E + V PE+++ GESE
Sbjct: 178 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 237
Query: 67 ANVRDIFDK 75
+R++F++
Sbjct: 238 QKLRELFEQ 246
Score = 108 (43.1 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKREL 118
+ + +F A+ PSA RE V VPN+TW DIG LE ++ EL
Sbjct: 445 IELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREEL 487
Score = 79 (32.9 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
RE + +P+ + E I L+ + R+L+ L Q D ++A +T GF GADL +C+ A
Sbjct: 322 REICLGIPDEASRERI--LQTLCRKLR-LPQAFDFCHLAHLTPGFVGADLMALCREAAMC 378
Query: 153 AIRQ---SIETEIRR--EREKLAGNPAASAAMETEDEDDPVPEITR 193
A+ + ++ + ++ E E L + TE + E+ R
Sbjct: 379 AVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQR 424
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 155 (59.6 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 129 (50.5 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DVDL IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SRE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 155 (59.6 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 129 (50.5 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DVDL IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SKE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 482
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 209 (78.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP ++ + K+ ++ +G+L YGPPGC KTL AKAIA+E NFISVKGPE+ + + GE
Sbjct: 853 YPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGE 912
Query: 65 SEANVRDIFDKVTMEN 80
SE ++R+IF K EN
Sbjct: 913 SEKSIRNIFKKAR-EN 927
Score = 78 (32.5 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 22 RGVLFYGPPGCGKTLLAKAIANE 44
+G+L +GPPGCGKT +A I E
Sbjct: 459 KGILLHGPPGCGKTYIALLIKEE 481
Score = 70 (29.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQS-----------IETEIRR-EREKLAGNPAASA 177
+AK T +SGA++ IC+ A A+RQ+ I+ +I+ E N A S
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIKINPKIKIKIKNNETNNTQNNIAHSE 1172
Query: 178 AMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
+ + +P+ +++ HF ++ + +++ I Y+ + +
Sbjct: 1173 KNKYPFDKEPLIGLSKKHFLRVLKKIKPQTSESLINFYKNYKE 1215
Score = 69 (29.3 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 90 PSALRETIVEVPNITWEDIGGLEGVKRELQE 120
PS ++E +++P ++DIGG + VKR + E
Sbjct: 819 PSGMKELYIDIPKTRFKDIGGYKFVKRCINE 849
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 209 (78.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP ++ + K+ ++ +G+L YGPPGC KTL AKAIA+E NFISVKGPE+ + + GE
Sbjct: 853 YPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGE 912
Query: 65 SEANVRDIFDKVTMEN 80
SE ++R+IF K EN
Sbjct: 913 SEKSIRNIFKKAR-EN 927
Score = 78 (32.5 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 22 RGVLFYGPPGCGKTLLAKAIANE 44
+G+L +GPPGCGKT +A I E
Sbjct: 459 KGILLHGPPGCGKTYIALLIKEE 481
Score = 70 (29.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 130 IAKVTNGFSGADLTEICQRACKLAIRQS-----------IETEIRR-EREKLAGNPAASA 177
+AK T +SGA++ IC+ A A+RQ+ I+ +I+ E N A S
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIKINPKIKIKIKNNETNNTQNNIAHSE 1172
Query: 178 AMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
+ + +P+ +++ HF ++ + +++ I Y+ + +
Sbjct: 1173 KNKYPFDKEPLIGLSKKHFLRVLKKIKPQTSESLINFYKNYKE 1215
Score = 69 (29.3 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 90 PSALRETIVEVPNITWEDIGGLEGVKRELQE 120
PS ++E +++P ++DIGG + VKR + E
Sbjct: 819 PSGMKELYIDIPKTRFKDIGGYKFVKRCINE 849
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 183 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 242
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 243 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 291
Query: 126 DLN 128
LN
Sbjct: 292 -LN 293
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 353 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 400
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 193 (73.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/123 (38%), Positives = 69/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A FI V G E + + GE
Sbjct: 184 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 243
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 244 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 292
Query: 126 DLN 128
LN
Sbjct: 293 -LN 294
Score = 77 (32.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L ++VDL +Y+A+ + SGAD+ ICQ + LA+R++ + ++ EK
Sbjct: 354 LSEEVDLEDYVAR-PDKISGADINSICQESGMLAVRENRYIVLAKDFEK 401
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 146 (56.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 312 PMLMPDYF-KGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGES 370
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 371 EKMVRLLFE 379
Score = 139 (54.0 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 63 GESEANVRDIFDKVTMENFRYAMGKSSPSALRETI-VEVPNITWEDIGGLEGVKRELQEL 121
GE +A V + + NF + + ++ L + I + +P+ D G +K L+E+
Sbjct: 427 GEEQAKVVMV---LAATNFPWDIDEALRRRLEKRIYIPLPS----DEGREALLKINLREV 479
Query: 122 -VQD-VDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAG-NPAASAA 178
V D VDL Y+A G+SGAD+T +C+ A +++R+ K+AG P
Sbjct: 480 KVDDSVDLTYVANELKGYSGADITNVCREASMMSMRR-----------KIAGLTPEQIRQ 528
Query: 179 METEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQS 225
+ TE+ D PV + F EAM +SV+ AD+ KYE + + S
Sbjct: 529 LATEEVDLPV---SNKDFNEAMSRCNKSVSRADLDKYEKWMREFGSS 572
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 218 (81.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 724 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 781
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 782 EENVREVF 789
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET-ED 183
+GADL +C A A+++ +R E L P +SA + T ED
Sbjct: 910 TGADLYSLCSDAMTAALKR----RVRDLEEGL--EPGSSALLLTMED 950
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 218 (81.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 724 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 781
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 782 EENVREVF 789
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET-ED 183
+GADL +C A A+++ + ++ E P +SA M T ED
Sbjct: 910 TGADLYSLCSDAMTAALKRRVH-DLEEGLE-----PGSSALMLTMED 950
>TAIR|locus:2132922 [details] [associations]
symbol:AT4G28000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00546324 RefSeq:NP_194529.4
UniGene:At.54531 ProteinModelPortal:F4JKF8 SMR:F4JKF8 PRIDE:F4JKF8
EnsemblPlants:AT4G28000.1 GeneID:828913 KEGG:ath:AT4G28000
OMA:GAVMNEL ArrayExpress:F4JKF8 Uniprot:F4JKF8
Length = 830
Score = 185 (70.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 6 PVEHPEKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P+ P+ F K G+ +P RG+L +GPPG GKT++AKAIANE A+FI+V + + WFGE
Sbjct: 537 PLRRPDLF-KGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGE 595
Query: 65 SEANVRDIF 73
E NVR +F
Sbjct: 596 DEKNVRALF 604
Score = 97 (39.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 112 EGVKREL--QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E + R L +E +++D +A++T+G+SG+DL C A +R+ I+ E +++E+
Sbjct: 693 EKILRTLLSKEKTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVRELIKQECLKDQERR 752
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRG 227
A + E + + V E E + S+ D + K ++ A + G
Sbjct: 753 KREEAEKNSEEGSEAKEEVSE------ERGITLRPLSMEDMKVAKSQVAASFAAEGAG 804
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 218 (81.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 722 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 779
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 780 EENVREVF 787
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET-ED 183
+GADL +C A A+++ +R E L P +SA + T ED
Sbjct: 908 TGADLYSLCSDAMMTALKR----RVRDLEEGL--EPRSSALLLTMED 948
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 218 (81.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 722 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 779
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 780 EENVREVF 787
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET-ED 183
+GADL +C A A+++ +R E L P +SA + T ED
Sbjct: 908 TGADLYSLCSDAMMTALKR----RVRDLEEGL--EPRSSALLLTMED 948
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 196 (74.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 47/123 (38%), Positives = 70/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E + + G+ P RGVL YGPPGCGKT+LAKA+A+ A+FI V G E + + GE
Sbjct: 179 PLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEG 238
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN +P+ + I E+ I + G RE+Q ++ ++
Sbjct: 239 PRMVRDVF-RLAKEN--------APAII--FIDEIDAIATKRFDAQTGADREVQRILLEL 287
Query: 126 DLN 128
LN
Sbjct: 288 -LN 289
Score = 71 (30.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L +DVDL + SGAD+ ICQ A A+R++ + ++ EK
Sbjct: 349 LSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEK 396
>ZFIN|ZDB-GENE-050522-514 [details] [associations]
symbol:katna1 "katanin p60 (ATPase-containing)
subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
"midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
UniGene:Dr.78566 ProteinModelPortal:Q5RII9
Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
Uniprot:Q5RII9
Length = 485
Score = 155 (59.6 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 223 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGES 281
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 282 EKLVRLLFE 290
Score = 125 (49.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 63 GESEANVRDIFDKVTMENFRYAMGKSSPSALRETI-VEVPNITWEDIGGLEGVKRELQEL 121
G SE + + + NF + + ++ L + I + +P+ G ++ +K L+EL
Sbjct: 337 GTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAK----GRVDLLKINLKEL 392
Query: 122 --VQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAM 179
DV+++ IA+ G+SGAD+T +C+ A +A+R+ IE E L P M
Sbjct: 393 DLANDVNMDKIAEQMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL---PKDEMHM 449
Query: 180 ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
T ED FE A++ +SV+ AD+ KYE
Sbjct: 450 PTTMED----------FETALKKVSKSVSAADLEKYE 476
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 189 (71.6 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P ++ F ++ G+L YG PGCGKTLLA AIA +C NFIS+KGPE+L + G
Sbjct: 753 WPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGA 812
Query: 65 SEANVRDIFDK 75
SE +VR++F++
Sbjct: 813 SEQSVRELFER 823
Score = 94 (38.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 27/85 (31%), Positives = 52/85 (61%)
Query: 90 PSALRETIV-EVPNITWED-IGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L ++++ ++PN +ED + L+ + ++ +L DV+L+ IA+ T GFSGAD+ +
Sbjct: 891 PGRLDKSVICDMPN--YEDRLDILQSITTKM-DLSDDVNLHEIAEKTTGFSGADMQGLGY 947
Query: 148 RACKLAIRQSIETEIRREREKLAGN 172
A A+ ++E +RE+++ A N
Sbjct: 948 NAYLKAVHVTLEELSQREQDE-ANN 971
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEG 113
+T ENF ++ ++ PS +++ I E + +G
Sbjct: 1036 ITHENFLESLKETKPSISHSEKIKLTKIYKEFVNDRDG 1073
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 189 (71.6 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P ++ F ++ G+L YG PGCGKTLLA AIA +C NFIS+KGPE+L + G
Sbjct: 753 WPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLNFISIKGPEILNKYIGA 812
Query: 65 SEANVRDIFDK 75
SE +VR++F++
Sbjct: 813 SEQSVRELFER 823
Score = 94 (38.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 27/85 (31%), Positives = 52/85 (61%)
Query: 90 PSALRETIV-EVPNITWED-IGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L ++++ ++PN +ED + L+ + ++ +L DV+L+ IA+ T GFSGAD+ +
Sbjct: 891 PGRLDKSVICDMPN--YEDRLDILQSITTKM-DLSDDVNLHEIAEKTTGFSGADMQGLGY 947
Query: 148 RACKLAIRQSIETEIRREREKLAGN 172
A A+ ++E +RE+++ A N
Sbjct: 948 NAYLKAVHVTLEELSQREQDE-ANN 971
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEG 113
+T ENF ++ ++ PS +++ I E + +G
Sbjct: 1036 ITHENFLESLKETKPSISHSEKIKLTKIYKEFVNDRDG 1073
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 155 (59.6 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 125 (49.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 53/167 (31%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G + D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DVDL IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SKE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 482
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 218 (81.8 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 713 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 770
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 771 EENVREVF 778
Score = 41 (19.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 138 SGADLTEICQRACKLAIRQSIETEIRREREKLAG-NPAASAAMET-ED 183
+GADL +C A A++ RR R+ G P +SA + T ED
Sbjct: 899 TGADLYSLCADAMTAALK-------RRVRDLEDGLEPGSSALLLTMED 939
>UNIPROTKB|B5X3X5 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8030 "Salmo salar" [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:BT045744
RefSeq:NP_001133845.1 UniGene:Ssa.26227 ProteinModelPortal:B5X3X5
GeneID:100195344 CTD:100195344 Uniprot:B5X3X5
Length = 486
Score = 156 (60.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 223 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGES 281
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 282 EKLVRILFE 290
Score = 123 (48.4 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 116 RELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAA 175
+EL EL DVD+ IA+ + G+SGAD+T +C+ A +A+R+ IE E ++ A
Sbjct: 391 KEL-ELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNIS---RA 446
Query: 176 SAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
M T ED FE +++ +SV+ +D+ KYE + +
Sbjct: 447 EMHMPTTMED----------FESSLKKVSKSVSASDLEKYEKWIE 481
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELV 122
R+ I + PN+ W+DI LE K+ L+E V
Sbjct: 192 RDIISQNPNVKWDDIADLEEAKKLLKEAV 220
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 203 (76.5 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++HP+ F + G++P RGVL YGPPGCGKT + +A+A+ Q + +VKG EL+ W G
Sbjct: 482 WPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGS 541
Query: 65 SEANVRDIF 73
SE VR++F
Sbjct: 542 SEKAVRELF 550
Score = 69 (29.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIE 159
L DVDL+ +A +G+S AD + + A A+R+SI+
Sbjct: 651 LSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSID 689
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 155 (59.6 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 124 (48.7 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 53/167 (31%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DV+L IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SRE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 482
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 155 (59.6 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 124 (48.7 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DV+L IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ + M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SRE---AMHMPTTMED----------FEMALKKISKSVSAADIERYE 482
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 155 (59.6 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F +V L + + GES
Sbjct: 228 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGES 286
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 287 EKLVRLLFE 295
Score = 124 (48.7 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 53/167 (31%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETI-VEVPNITW-EDIG 109
ELL G A+ D K+ M NF + + ++ L + I + +P+ E++
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREEL- 390
Query: 110 GLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
L REL EL DV+L IA+ G+SGAD+T +C+ A +A+R+ IE E L
Sbjct: 391 -LRISLREL-ELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNL 448
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+ M T ED FE A++ +SV+ ADI +YE
Sbjct: 449 SRE---EMHMPTTMED----------FEMALKKVSKSVSAADIERYE 482
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 218 (81.8 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G++ S G+L +GPPG GKTLLAKA+A EC F+SVKGPEL+ M+ G+S
Sbjct: 725 PLEHPE-LLSLGLRRS-GLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 782
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 783 EENVREVF 790
Score = 40 (19.1 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 138 SGADLTEICQRACKLAIRQSI 158
+GADL +C A A+++ +
Sbjct: 911 TGADLYSLCSDAMMTALKRRV 931
>TAIR|locus:2133298 [details] [associations]
symbol:AT4G02480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR000253 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR008984
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0017111
EMBL:AK229937 IPI:IPI00540740 RefSeq:NP_567238.2 UniGene:At.27891
UniGene:At.54098 ProteinModelPortal:Q0WM93 SMR:Q0WM93 STRING:Q0WM93
PRIDE:Q0WM93 EnsemblPlants:AT4G02480.1 GeneID:827979
KEGG:ath:AT4G02480 TAIR:At4g02480 HOGENOM:HOG000225144
InParanoid:Q0WM93 OMA:STRRQAF PhylomeDB:Q0WM93
ProtClustDB:CLSN2690660 Genevestigator:Q0WM93 Uniprot:Q0WM93
Length = 1265
Score = 176 (67.0 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 6 PVEHPEKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++ PE F K + +P++G+L +GPPG GKT+LAKA+A E ANFI++ + + WFGE
Sbjct: 982 PLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGE 1041
Query: 65 SEANVRDIF 73
E V+ +F
Sbjct: 1042 GEKYVKAVF 1050
Score = 109 (43.4 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
R +V +P+ T + + V +E+ DVDL IA +T+G+SG+DL +C A
Sbjct: 1126 RRLMVNLPDAT--NRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFP 1183
Query: 154 IRQSIETEIRREREKLAGN-PAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADI 212
IR+ +E E + + A N P T+ + + AH + + S N ++
Sbjct: 1184 IREILEKEKKEKTAAQAENRPTPPLYSCTDVRSLTMNDFKAAHDQVCASVSSDSSNMNEL 1243
Query: 213 RKY-EMFAQ 220
+++ E++ +
Sbjct: 1244 QQWNELYGE 1252
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 192 (72.6 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ G+L YGPPG GKTLLA +A E NFIS+KGPELL+ + G S
Sbjct: 860 PAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGAS 919
Query: 66 EANVRDIF 73
E VRD+F
Sbjct: 920 EQAVRDVF 927
Score = 72 (30.4 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRA 149
L DVDL ++A VT+ F+GADL + A
Sbjct: 1027 LADDVDLQHVASVTDSFTGADLKALLYNA 1055
Score = 54 (24.1 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 147 QRACKLAIRQSIETEIRREREKLAGNPAASAAMETEDEDDPVP-----EITRAHFEEAMR 201
Q C+ + Q ++R E + G + + E E + P P I++AH A+
Sbjct: 1183 QEGCQ-DLTQEQRDQLRAEISIIKGRYRSQSG-EDESLNQPGPIKTTFAISQAHLMTALA 1240
Query: 202 FARRSVNDADIRK----YEMFAQTLQQSRGFGTNFR 233
R S+++ + ++ YE F ++ GT FR
Sbjct: 1241 HTRPSISEDEGKEFAELYENFQNPKKRKNQSGTVFR 1276
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 197 (74.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++H F+K G+ P RG+L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE
Sbjct: 304 WPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGE 363
Query: 65 SEANVRDIFDKVTM 78
EA +R+ F + +
Sbjct: 364 GEALLRNTFQRARL 377
Score = 129 (50.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P +P + G++ RG+L YGPPG GKT L +A+ EC A+ I + + GE
Sbjct: 40 FPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGE 99
Query: 65 SEANVRDIF 73
SE +R+ F
Sbjct: 100 SEKVLREAF 108
Score = 112 (44.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 76 VTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQ 123
+T ++F+ A PS R VE+P +TW+D+GGL+ +K++LQ+ V+
Sbjct: 256 LTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVE 303
Score = 73 (30.8 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
L DVDL IA+ T+ F+GA+L +C+ + +++R++I
Sbjct: 476 LGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENI 513
Score = 72 (30.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 95 ETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAI 154
+ +VEV ED + + + L VDL IA NG+ GADL +C+ A A
Sbjct: 188 DALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISAS 247
Query: 155 RQSIETEIRRERE-KLA 170
++S ++ I ++ K+A
Sbjct: 248 KRSSDSLILTSQDFKIA 264
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 184 (69.8 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E+F K G++P +GVL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+
Sbjct: 189 PMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 248
Query: 66 EANVRDIF 73
VRD F
Sbjct: 249 AKLVRDAF 256
Score = 84 (34.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E P+ T E G + + + DV+ +A+ T+ F+GA L +C A LA+R+
Sbjct: 336 IEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
Query: 158 IETEIRRE 165
TE+ E
Sbjct: 396 A-TEVNHE 402
>TAIR|locus:2126783 [details] [associations]
symbol:AT4G24860 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GO:GO:0017111 IPI:IPI00528866 RefSeq:NP_194217.2
UniGene:At.32315 ProteinModelPortal:F4JRR2 SMR:F4JRR2 PRIDE:F4JRR2
EnsemblPlants:AT4G24860.1 GeneID:828589 KEGG:ath:AT4G24860
OMA:ITRIQRK ArrayExpress:F4JRR2 Uniprot:F4JRR2
Length = 1122
Score = 179 (68.1 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 6 PVEHPEKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++ PE F K + +P +G+L +GPPG GKT+LAKA+A E ANFI++ + + WFGE
Sbjct: 839 PLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGE 898
Query: 65 SEANVRDIF 73
E V+ +F
Sbjct: 899 GEKYVKAVF 907
Score = 102 (41.0 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 119 QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRERE 167
++L D+D+ IA +TNG+SG+DL +C A I++ +E E +RER+
Sbjct: 1006 EDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEILEKE-KRERD 1053
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 198 (74.8 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 440 FPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLS 499
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 500 KWVGESERQLRLLFDQ 515
Score = 60 (26.2 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D+ L +A+ G+ GAD+ IC A A+R+ +I EKL
Sbjct: 617 DMFLEELAENCVGYCGADIKSICSEAALCALRRRYP-QIYTTSEKL 661
Score = 56 (24.8 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 222 LQQSRGFGTNFRFPSNPNQSQSGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPAN 281
+ Q++ G N ++ SA NE+G G M + Q+ S G N
Sbjct: 1179 ISQAKDDGQNVTDDKIETDTEENQDTSADHNETGNTGESSMEENEKQQNVSEGKIKLRNN 1238
Query: 282 ESGTGGILQDEAED 295
SGT +++E E+
Sbjct: 1239 SSGT--CIENELEE 1250
Score = 40 (19.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 117 ELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAAS 176
E E Q+V I K+ N SG + + + R + T++R+++ G+ ++S
Sbjct: 1220 EENEKQQNVSEGKI-KLRNNSSGTCIENELEESG----RTTACTDLRKDKIACNGDASSS 1274
Query: 177 AAMETEDEDD 186
++ DE++
Sbjct: 1275 QIIDISDENE 1284
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 196 (74.1 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 40/68 (58%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ GVL YGPPG GKTLLA IA E NFISVKGPELL+ + G S
Sbjct: 843 PAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGAS 902
Query: 66 EANVRDIF 73
E VRDIF
Sbjct: 903 EQAVRDIF 910
Score = 81 (33.6 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 42/182 (23%), Positives = 74/182 (40%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAM- 179
L DVDL ++A VTN F+GADL + A A+ + + ++ + + + ++M
Sbjct: 1010 LADDVDLQHVASVTNSFTGADLKALLYNAQLEAVHGRLLSCGLQDGSSSSDSDLSLSSMV 1069
Query: 180 ---ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEM----FAQTLQQSRGFGTNF 232
+ DD + E+++ S D K+ M F + + G GT+
Sbjct: 1070 FLNHSSGSDDSAGD-GECGLEQSLVSLEMSEMLPDESKFNMYRLYFGSSYESELGNGTS- 1127
Query: 233 RFPSNPNQSQSGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPANESGTGGILQDE 292
S+ + P+S + SG G QS S P A++ G + Q++
Sbjct: 1128 ---SDLSPQCLSAPSSTAQDFSGVAG--------KEQSSSRPPVLRTASQEGYQELTQEQ 1176
Query: 293 AE 294
E
Sbjct: 1177 RE 1178
>CGD|CAL0001067 [details] [associations]
symbol:orf19.4362 species:5476 "Candida albicans" [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006626 "protein
targeting to mitochondrion" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0001067 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000225141 EMBL:AACQ01000091
EMBL:AACQ01000090 RefSeq:XP_715087.1 RefSeq:XP_715138.1
ProteinModelPortal:Q5A026 GeneID:3643190 GeneID:3643254
KEGG:cal:CaO19.11840 KEGG:cal:CaO19.4362 Uniprot:Q5A026
Length = 369
Score = 169 (64.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 34/70 (48%), Positives = 44/70 (62%)
Query: 6 PVEHPEKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
P+ PE F +Q +GVLFYGPPGCGKT+LAKAIA E A F+S++ ++ W+G
Sbjct: 117 PLTEPELFAAHSSLIQSPKGVLFYGPPGCGKTMLAKAIAKESGAFFLSIRMSSIMDKWYG 176
Query: 64 ESEANVRDIF 73
ES IF
Sbjct: 177 ESNKITDAIF 186
Score = 97 (39.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA 170
D DL YI T GFSG+DL E+C+ A L +R+ I+ + KL+
Sbjct: 288 DFDLEYIVANTRGFSGSDLRELCREAAILPVREYIKENYNYKSGKLS 334
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 196 (74.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 40/68 (58%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ GVL YGPPG GKTLLA IA E NFISVKGPELL+ + G S
Sbjct: 992 PAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGAS 1051
Query: 66 EANVRDIF 73
E VRDIF
Sbjct: 1052 EQAVRDIF 1059
Score = 81 (33.6 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 42/182 (23%), Positives = 74/182 (40%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAM- 179
L DVDL ++A VTN F+GADL + A A+ + + ++ + + + ++M
Sbjct: 1159 LADDVDLQHVASVTNSFTGADLKALLYNAQLEAVHGRLLSCGLQDGSSSSDSDLSLSSMV 1218
Query: 180 ---ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEM----FAQTLQQSRGFGTNF 232
+ DD + E+++ S D K+ M F + + G GT+
Sbjct: 1219 FLNHSSGSDDSAGD-GECGLEQSLVSLEMSEMLPDESKFNMYRLYFGSSYESELGNGTS- 1276
Query: 233 RFPSNPNQSQSGGPNSAPANESGTGGILLMFPSNPNQSQSGGPNSAPANESGTGGILQDE 292
S+ + P+S + SG G QS S P A++ G + Q++
Sbjct: 1277 ---SDLSPQCLSAPSSTAQDFSGVAG--------KEQSSSRPPVLRTASQEGYQELTQEQ 1325
Query: 293 AE 294
E
Sbjct: 1326 RE 1327
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 198 (74.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP ++ F + ++ G+L YG PGCGKT+LA A+A EC NFISVKGPE+L + G
Sbjct: 868 YPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGA 927
Query: 65 SEANVRDIFDK 75
SE +VRD+F++
Sbjct: 928 SEKSVRDLFER 938
Score = 58 (25.5 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 163 RRER--EKLAGNPAASAAMETEDEDDPVP---EIT-R-AHFEEAMRFARRSVNDADIRKY 215
RR+R E+ AG+ A + A + E P EI R H E ++ R S+++A+ R+
Sbjct: 1135 RRQRQFEQAAGSLAPTTATDNAHETGPAEGREEIVVRWEHMERSLNTTRSSLSEAERRRL 1194
Query: 216 EMFAQTLQQSRGFGTNFRFPSNPNQSQSGGPNS 248
+ + R N P+ + GG S
Sbjct: 1195 LAIYREFVEGR----NGEMPNGEGAREVGGRTS 1223
Score = 54 (24.1 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 90 PSALRETIV-EVPN-ITWEDIGGLEGVKREL---QELVQDVDLNYIAKVTNGFSGADLTE 144
P L ++++ ++PN DI + V ++L E+V +D +A T GFSGADL
Sbjct: 1006 PGRLDKSLLCDMPNHADRADI--IRAVSKKLAMSNEVVARID--EVAARTAGFSGADLQA 1061
Query: 145 ICQRACKLAIRQSI 158
+ A A+ ++
Sbjct: 1062 VVYNAHLEAVHDAL 1075
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 188 (71.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF K G++P +GVL +GPPG GKTLLA+A A++ A F+ + GP+L+ M+ G+
Sbjct: 205 PMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDG 264
Query: 66 EANVRDIFD 74
VRD F+
Sbjct: 265 AKMVRDAFN 273
Score = 76 (31.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E+P+ E + + + +DV+ +A+ T+ F+GA L +C A +A+R+
Sbjct: 352 IELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRG 411
Query: 158 IETEIRRE 165
TEI E
Sbjct: 412 A-TEIDHE 418
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 188 (71.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF K G++P +GVL +GPPG GKTLLA+A A++ A F+ + GP+L+ M+ G+
Sbjct: 205 PMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDG 264
Query: 66 EANVRDIFD 74
VRD F+
Sbjct: 265 AKMVRDAFN 273
Score = 76 (31.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E+P+ E + + + +DV+ +A+ T+ F+GA L +C A +A+R+
Sbjct: 352 IELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRG 411
Query: 158 IETEIRRE 165
TEI E
Sbjct: 412 A-TEIDHE 418
>UNIPROTKB|Q0IIR9 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 CTD:11104 EMBL:BC121679
RefSeq:NP_001072433.1 UniGene:Str.53362 ProteinModelPortal:Q0IIR9
GeneID:779887 KEGG:xtr:779887 Xenbase:XB-GENE-995720 Uniprot:Q0IIR9
Length = 492
Score = 154 (59.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F ++ L + + GES
Sbjct: 229 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGES 287
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 288 EKLVRLLFE 296
Score = 119 (46.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 116 RELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAA 175
+EL EL DV++ IA+ +G+SGAD+T +C+ A +A+R+ IE E L+ +
Sbjct: 397 KEL-ELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRD--- 452
Query: 176 SAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
M T ED FE A++ +SV+ +DI KYE + +
Sbjct: 453 DMHMPTTMED----------FEMALKKVSKSVSASDIEKYEKWIE 487
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELV 122
R+ I + PNI W+DI LE K+ L+E V
Sbjct: 198 RDIISQNPNIRWDDIADLEEAKKLLKEAV 226
Score = 38 (18.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 71 DIFDKVTMENFRYAMGKSSPSALRETIVEVPNITW-EDIG 109
D+ TME+F A+ K S S I + W E+ G
Sbjct: 453 DMHMPTTMEDFEMALKKVSKSVSASDIEKYEK--WIEEFG 490
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 211 (79.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+EHPE L G+ S G+L YGPPG GKTLLAKA+A C F+SVKGPEL+ M+ G+S
Sbjct: 424 PLEHPE-LLSLGLCRS-GLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQS 481
Query: 66 EANVRDIF 73
E NVR++F
Sbjct: 482 EENVRNVF 489
Score = 48 (22.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 111 LEGVKRELQELVQDVDLNYIAKVTNG-FSGADLTEICQRACKLAIRQSIE 159
L V R+ + L V+L+ I + +GAD+ +C A A+++ +E
Sbjct: 583 LSAVTRKFK-LDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVE 631
>TAIR|locus:2024522 [details] [associations]
symbol:DAA1 "DUO1-activated ATPase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048235 "pollen sperm cell differentiation"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 GO:GO:0017111 GO:GO:0048235
IPI:IPI00517535 RefSeq:NP_849842.1 UniGene:At.16450
ProteinModelPortal:F4I5A3 SMR:F4I5A3 PRIDE:F4I5A3
EnsemblPlants:AT1G64110.2 GeneID:842716 KEGG:ath:AT1G64110
OMA:KANPIVL Uniprot:F4I5A3
Length = 829
Score = 181 (68.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F ++P RG+L +GPPG GKT+LAKAIA E A+FI+V + + WFGE
Sbjct: 540 PLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGED 599
Query: 66 EANVRDIF 73
E NVR +F
Sbjct: 600 EKNVRALF 607
Score = 93 (37.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 22/84 (26%), Positives = 44/84 (52%)
Query: 119 QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAA 178
+++ +++D +A +T G++G+DL +C A +R+ I+ E ++ EK A
Sbjct: 706 EKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAG 765
Query: 179 METEDEDDPV---PEITRAHFEEA 199
E E +++ V + R F+EA
Sbjct: 766 EEDEGKEERVITLRPLNRQDFKEA 789
Score = 71 (30.1 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 74 DKVTMENFRYAMGKSSPSALRETIV--EVPNITWEDIGGLEGVKRELQELV 122
+KVT + A +R ++ E N+T++DIG L+ +K LQELV
Sbjct: 487 EKVTPKAPEVAPDNEFEKRIRPEVIPAEEINVTFKDIGALDEIKESLQELV 537
Score = 47 (21.6 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 21 SRGVLFYGPPGCGKTLLAKAIANECQANFI 50
SR +L GP + +LAKA+A+ A +
Sbjct: 105 SRAILLSGPAELYQQMLAKALAHFFDAKLL 134
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 203 (76.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/122 (37%), Positives = 67/122 (54%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPEKF+ G+ P +GVL YGPPG GKTL A+A+AN A F+ V G EL+ + GE
Sbjct: 189 PLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEG 248
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VRD+F + A K + + + + ++D GG V+R + EL+
Sbjct: 249 ARMVRDLF--------QMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQ 300
Query: 125 VD 126
+D
Sbjct: 301 LD 302
Score = 53 (23.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR 155
+D+ +A++ +GAD+ +C A AIR
Sbjct: 361 RDIRFELLARLCPNSTGADIRSVCTEAGMFAIR 393
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 185 (70.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H E+F K G++P +GVL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+
Sbjct: 190 PMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 249
Query: 66 EANVRDIF 73
VRD F
Sbjct: 250 AKLVRDAF 257
Score = 78 (32.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E P+ T E + + + DV+ +A+ T+ F+GA L +C A LA+R+
Sbjct: 337 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 396
Query: 158 IETEIRRE 165
TE+ E
Sbjct: 397 A-TEVNHE 403
>UNIPROTKB|Q9PUL2 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8355 "Xenopus laevis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AF177942
UniGene:Xl.6322 ProteinModelPortal:Q9PUL2 IntAct:Q9PUL2
Xenbase:XB-GENE-995725 Uniprot:Q9PUL2
Length = 486
Score = 154 (59.3 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F K +P +GVL GPPG GKTLLAKA+A EC+ F ++ L + + GES
Sbjct: 225 PMWMPE-FFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGES 283
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 284 EKLVRLLFE 292
Score = 118 (46.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 116 RELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAA 175
+EL EL DV++ IA+ +G+SGAD+T +C+ A +A+R+ IE E L+ +
Sbjct: 393 KEL-ELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRD--- 448
Query: 176 SAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
M T ED FE A++ +SV+ +DI KYE
Sbjct: 449 DMHMPTTMED----------FEMALKKVSKSVSASDIEKYE 479
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELV 122
R+ I + PNI W+DI LE K+ L+E V
Sbjct: 194 RDIISQNPNIRWDDIADLEEAKKLLKEAV 222
Score = 37 (18.1 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 71 DIFDKVTMENFRYAMGKSSPS 91
D+ TME+F A+ K S S
Sbjct: 449 DMHMPTTMEDFEMALKKVSKS 469
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 198 (74.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ G+L YGPPG GKTLLA IA E + NFISVKGPELL+ + G S
Sbjct: 537 PAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGAS 596
Query: 66 EANVRDIF 73
E VRDIF
Sbjct: 597 EQAVRDIF 604
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRA 149
L DVDL ++A VT+ F+GADL + A
Sbjct: 704 LADDVDLQHVASVTDSFTGADLKALLYNA 732
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 194 (73.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 57 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 116
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 117 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 168
Query: 125 VD 126
+D
Sbjct: 169 LD 170
Score = 52 (23.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 229 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 269
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 180 (68.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 66 EANVRDIF 73
VR++F
Sbjct: 240 SRMVRELF 247
Score = 82 (33.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
+E PN E + + L++ +DL IA+ NG SGA+L +C A A+R+
Sbjct: 328 IEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 180 (68.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 66 EANVRDIF 73
VR++F
Sbjct: 240 SRMVRELF 247
Score = 82 (33.9 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
+E PN E + + L++ +DL IA+ NG SGA+L +C A A+R+
Sbjct: 328 IEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 191 (72.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 151 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 210
Query: 66 EANVRDIF 73
VRD F
Sbjct: 211 AKLVRDAF 218
Score = 65 (27.9 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 324 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 364
>RGD|1359252 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1359252
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874 HOVERGEN:HBG057074
CTD:84056 KO:K07767 OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 GeneTree:ENSGT00550000074466 EMBL:BC083673
IPI:IPI00370842 RefSeq:NP_001006957.1 RefSeq:XP_003751164.1
RefSeq:XP_003752600.1 UniGene:Rn.208215 ProteinModelPortal:Q5XIK7
PRIDE:Q5XIK7 Ensembl:ENSRNOT00000001219 GeneID:100910196
GeneID:288449 KEGG:rno:100910196 KEGG:rno:288449 UCSC:RGD:1359252
InParanoid:Q5XIK7 NextBio:628096 Genevestigator:Q5XIK7
GermOnline:ENSRNOG00000000916 Uniprot:Q5XIK7
Length = 488
Score = 147 (56.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 225 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 283
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 284 EKLVRLLFE 292
Score = 123 (48.4 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 52/167 (31%), Positives = 80/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 329 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRA 385
Query: 112 EGVKRELQELVQDVDLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E+ D D++ IA+ T G+SGAD+T IC+ A +A+R+ I
Sbjct: 386 ELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRIN---------- 435
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV TR E A++ +SV+ AD+ KYE
Sbjct: 436 GLSPEEIRALSKEELQMPV---TRGDLELALKKIAKSVSAADLEKYE 479
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 191 (72.3 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 155 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 214
Query: 66 EANVRDIF 73
VRD F
Sbjct: 215 AKLVRDAF 222
Score = 65 (27.9 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 328 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 368
>UNIPROTKB|E1BHF2 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:DAAA02033094
IPI:IPI00710392 RefSeq:NP_001179847.1 UniGene:Bt.104141
ProteinModelPortal:E1BHF2 PRIDE:E1BHF2 Ensembl:ENSBTAT00000012297
GeneID:537739 KEGG:bta:537739 NextBio:20877204 Uniprot:E1BHF2
Length = 490
Score = 147 (56.8 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 227 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 285
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 286 EKLVRLLFE 294
Score = 123 (48.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 331 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRT 387
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 388 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRIN---------- 437
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV TR FE A++ +SV+ AD+ KYE
Sbjct: 438 GLSPEEIRALSKEELQMPV---TRGDFELALKKIAKSVSAADLEKYE 481
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 188 (71.2 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ G+L YGPPG GKTLLA +A E NFIS++GPELL+ + G S
Sbjct: 859 PAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGAS 918
Query: 66 EANVRDIF 73
E VRD+F
Sbjct: 919 EQAVRDVF 926
Score = 71 (30.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRA 149
L DVDL ++A VT F+GADL + A
Sbjct: 1026 LADDVDLQHVASVTESFTGADLKALLYNA 1054
Score = 52 (23.4 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 154 IRQSIETEIRREREKLAGNPAASAAMETEDEDDPVP-----EITRAHFEEAMRFARRSVN 208
+ Q ++R + + G + + E E + P P I++AH A+ R S+N
Sbjct: 1188 LTQEQRDQLRADISIIKGRYQSQSG-EDESLNQPGPIKTSFAISQAHLMTALAHTRPSIN 1246
Query: 209 DADIRK----YEMFAQTLQQSRGFGTNFR 233
+ + ++ YE F ++ GT FR
Sbjct: 1247 EDEGKEFAELYENFQNPKKRKNQSGTVFR 1275
>UNIPROTKB|F1MAX6 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00550000074466 EMBL:DAAA02033094 IPI:IPI00824872
Ensembl:ENSBTAT00000052665 Uniprot:F1MAX6
Length = 499
Score = 147 (56.8 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 236 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 294
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 295 EKLVRLLFE 303
Score = 123 (48.4 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 340 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRT 396
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 397 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRIN---------- 446
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV TR FE A++ +SV+ AD+ KYE
Sbjct: 447 GLSPEEIRALSKEELQMPV---TRGDFELALKKIAKSVSAADLEKYE 490
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 198 (74.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ G+L YGPPG GKTLLA IA E + NFISVKGPELL+ + G S
Sbjct: 859 PAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGAS 918
Query: 66 EANVRDIF 73
E VRDIF
Sbjct: 919 EQAVRDIF 926
Score = 72 (30.4 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRA 149
L DVDL ++A VT+ F+GADL + A
Sbjct: 1026 LADDVDLQHVASVTDSFTGADLKALLYNA 1054
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 191 (72.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 163 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 222
Query: 66 EANVRDIF 73
VRD F
Sbjct: 223 AKLVRDAF 230
Score = 65 (27.9 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 336 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 376
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 194 (73.4 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 46/123 (37%), Positives = 70/123 (56%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H + + + G+ P RGVL +GPPGCGKT+LAKA+A+ A+FI V G E + + GE
Sbjct: 171 PLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEG 230
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ +N SPS + I E+ I + G RE+Q ++ ++
Sbjct: 231 PRMVRDLF-RLAKQN--------SPSII--FIDEIDAIATKRFDAQTGADREVQRILLEL 279
Query: 126 DLN 128
LN
Sbjct: 280 -LN 281
Score = 61 (26.5 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+DVDL I + S AD+ ICQ A A+R++
Sbjct: 343 EDVDLEDIIARPDKISNADINAICQEAGMHAVREN 377
>MGI|MGI:2387638 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2387638 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:BC030434 IPI:IPI00114980
RefSeq:NP_705800.1 UniGene:Mm.397405 ProteinModelPortal:Q8K0T4
SMR:Q8K0T4 PhosphoSite:Q8K0T4 PaxDb:Q8K0T4 PRIDE:Q8K0T4
Ensembl:ENSMUST00000047257 GeneID:231912 KEGG:mmu:231912
UCSC:uc009aow.2 GeneTree:ENSGT00550000074466 InParanoid:Q8K0T4
NextBio:380863 Bgee:Q8K0T4 CleanEx:MM_KATNAL1 Genevestigator:Q8K0T4
GermOnline:ENSMUSG00000041298 Uniprot:Q8K0T4
Length = 488
Score = 147 (56.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 225 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 283
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 284 EKLVRLLFE 292
Score = 122 (48.0 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 54/167 (32%), Positives = 78/167 (46%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 329 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRA 385
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L DV L IA T G+SGAD+T IC+ A +A+R+ I
Sbjct: 386 ELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRIN---------- 435
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV TR E A++ +SV+ AD+ KYE
Sbjct: 436 GLSPEEIRALSKEELQMPV---TRGDLELALKKIAKSVSAADLEKYE 479
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 191 (72.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 193 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 252
Query: 66 EANVRDIF 73
VRD F
Sbjct: 253 AKLVRDAF 260
Score = 66 (28.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
DV+ +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 366 DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELNHE 406
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 170 (64.9 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV+ P F K +P+ G+L YGPPG GK+ LAKA+A E + F SV +L++ W GES
Sbjct: 152 PVKFPHLF-KGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGES 210
Query: 66 EANVRDIFDKVTMEN 80
E V+ +F + EN
Sbjct: 211 EKLVKQLF-AMAREN 224
Score = 93 (37.8 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 126 DLNYIAKVTNGFSGADLTEICQRACKLAIR--QS------IETEIRREREKLAGNPAASA 177
D + +T G+SG+D+ + + A IR QS + TE R+ +P
Sbjct: 323 DYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDG 382
Query: 178 AME---TEDEDDPV--PEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQ 224
A+E T+ E D + P++T F +A++ R +VN+ D+ K E F + Q
Sbjct: 383 AIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQ 434
Score = 85 (35.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 87 KSSPSALRETIV-EVPNITWEDIGGLEGVKRELQELV 122
K AL I+ E PN+ WED+ GLEG K L+E V
Sbjct: 113 KKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAV 149
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 186 (70.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P + E F KFG+ P +G++ YGPPGC KT L KA+A+ + +F+S+ G + + + G+
Sbjct: 588 WPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGD 647
Query: 65 SEANVRDIFDK 75
SE +RDIF K
Sbjct: 648 SEQTIRDIFKK 658
Score = 134 (52.2 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
YP+ P+ F + P +G+L GPPG GKT L + + + IS+ ++ + GE
Sbjct: 305 YPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIEMISIDCAKISGSYIGE 364
Query: 65 SEANVRDIFDKVT 77
+E N+R+IF + +
Sbjct: 365 TEENLRNIFQEAS 377
Score = 103 (41.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 49 FISVKGPELLTMWFGESEANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVE-VPNITWE 106
FI+ LL E N + + +E+FR ++ + S L+ E +VE + N++W+
Sbjct: 511 FIAFSKYNLLKYQNNEQNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWD 570
Query: 107 DIGGLEGVKRELQELVQ 123
DIGGL+ +K EL++ ++
Sbjct: 571 DIGGLDDIKEELRQAIE 587
Score = 82 (33.9 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 114 VKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
+K + L +V+L I+ +TNGFSGADL +C+ A ++R+ +
Sbjct: 753 IKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDL 797
Score = 46 (21.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 90 PSAL-RETIVEVPNITWE-DIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQ 147
P L RE + VPN DI L K + ++ L+ IA T G+ GA++ +C+
Sbjct: 449 PGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNL-LDQIADETVGYVGANIQFLCR 507
Query: 148 RACKLA 153
+ +A
Sbjct: 508 DSAFIA 513
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 182 (69.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE FL+ G++P +GVL YGPPG GKTLLA+AIA+ ANF+ V ++ + GES
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGES 217
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 218 ARLIREMFN 226
Score = 76 (31.8 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET 181
++D I K+ GF+GADL IC A AIR + I + K + + +E+
Sbjct: 331 EIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLES 388
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 147 (56.8 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 226 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 284
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 285 EKLVRLLFE 293
Score = 121 (47.7 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 51/167 (30%), Positives = 78/167 (46%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 330 ELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRA 386
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 387 ELLKINLREVELDPDISLEEIAEKIEGYSGADITNVCRDASLMAMRRRIN---------- 436
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
P A+ E+ PV T+ FE A++ +SV+ AD+ KYE
Sbjct: 437 GLTPEEIRALSKEELQMPV---TKGDFELALKKISKSVSAADLEKYE 480
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 167 (63.8 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 6 PVEHPEKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
P++ PE F +G + P +GVL YGPPG GKT+LAKAIA E A FI+V+ L++ WFG
Sbjct: 103 PLKRPELFA-YGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFG 161
Query: 64 ESEANVRDIF 73
+++ V +F
Sbjct: 162 DAQKLVSAVF 171
Score = 94 (38.1 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 17/57 (29%), Positives = 36/57 (63%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
D+D ++IA++ G++G+D+ E+C++A IR+ ++ E R+ + L P + +E
Sbjct: 274 DIDFDHIARLCEGYTGSDIFELCKKAAYFPIREILDAE-RKGKPCLDPRPLSQLDLE 329
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 194 (73.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++H K ++ S G+L YGPPG GKTL+AKA+A EC +F+SV+GPELL M+ G+S
Sbjct: 635 PLKHVHLMGK-NLRRS-GILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQS 692
Query: 66 EANVRDIFDK 75
E NVR++F +
Sbjct: 693 EQNVREVFSR 702
Score = 72 (30.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 101 PNITWEDIGGLEGVKRELQELVQDVDLNYIA-KVTNGFSGADLTEICQRACKLAIRQSIE 159
P T ED + + + L VD+ IA ++ + SGADL IC A A+R++I+
Sbjct: 786 PCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTID 845
Query: 160 TEIR---REREKLAGNPAASAAMETEDEDDPVPEITRAHFE 197
+ E+E + N T+ + VP I+ E
Sbjct: 846 GHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKDLE 886
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 162 (62.1 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 32/65 (49%), Positives = 41/65 (63%)
Query: 11 EKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 70
EKF G + +G+L GPPG GKTLLAKAIA E F S+ G E + M+ G + VR
Sbjct: 182 EKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVR 241
Query: 71 DIFDK 75
D+FD+
Sbjct: 242 DLFDQ 246
Score = 106 (42.4 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 43/149 (28%), Positives = 69/149 (46%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
R +++ P+IT + + + + + L V+L +AK T GFSGADL + A LA
Sbjct: 322 RRVVLDKPDITGRE--AILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILA 379
Query: 154 IRQS---IETEIRRER--EKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVN 208
R++ +ETE E +AG S + T+++ E+T H E R V
Sbjct: 380 ARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEK-----EVTAYH-ETGHGLVLRLVQ 433
Query: 209 DAD-IRKYEMFAQ--TLQQSRGFGTNFRF 234
AD + K + A+ TL +R R+
Sbjct: 434 GADPVHKISIVARGMTLGHTRQLPNEDRY 462
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 191 (72.3 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 45/123 (36%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 203 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 262
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I V ++ + GG ++R + EL+
Sbjct: 263 PKLVRELF-RVAEEH--------APSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 313
Query: 124 DVD 126
+D
Sbjct: 314 QLD 316
Score = 65 (27.9 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L +DV+L+ + + SGAD+ IC A +A+R+
Sbjct: 373 LAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRE 408
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 191 (72.3 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 205 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 264
Query: 66 EANVRDIF 73
VRD F
Sbjct: 265 AKLVRDAF 272
Score = 65 (27.9 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 378 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 418
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 191 (72.3 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 205 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 264
Query: 66 EANVRDIF 73
VRD F
Sbjct: 265 AKLVRDAF 272
Score = 65 (27.9 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 378 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 418
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 191 (72.3 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 205 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 264
Query: 66 EANVRDIF 73
VRD F
Sbjct: 265 AKLVRDAF 272
Score = 65 (27.9 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 378 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 418
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 191 (72.3 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 208 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 267
Query: 66 EANVRDIF 73
VRD F
Sbjct: 268 AKLVRDAF 275
Score = 65 (27.9 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 381 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 421
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 191 (72.3 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 208 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 267
Query: 66 EANVRDIF 73
VRD F
Sbjct: 268 AKLVRDAF 275
Score = 65 (27.9 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 381 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 421
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 191 (72.3 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 170 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 229
Query: 66 EANVRDIF 73
VRD F
Sbjct: 230 AKLVRDAF 237
Score = 63 (27.2 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 343 DVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGA-TELTHE 383
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 191 (72.3 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 212 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 271
Query: 66 EANVRDIF 73
VRD F
Sbjct: 272 AKLVRDAF 279
Score = 65 (27.9 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 385 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 425
>UNIPROTKB|Q9BW62 [details] [associations]
symbol:KATNAL1 "Katanin p60 ATPase-containing subunit
A-like 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:CH471075
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024 EMBL:AK291439
EMBL:AL356750 EMBL:BC000612 IPI:IPI00789455 RefSeq:NP_001014402.1
RefSeq:NP_115492.1 UniGene:Hs.243596 ProteinModelPortal:Q9BW62
SMR:Q9BW62 IntAct:Q9BW62 MINT:MINT-1463957 STRING:Q9BW62
PhosphoSite:Q9BW62 DMDM:60390214 PaxDb:Q9BW62 PRIDE:Q9BW62
DNASU:84056 Ensembl:ENST00000380615 Ensembl:ENST00000380617
GeneID:84056 KEGG:hsa:84056 UCSC:uc001uss.3 GeneCards:GC13M030776
HGNC:HGNC:28361 HPA:HPA046205 MIM:614764 neXtProt:NX_Q9BW62
PharmGKB:PA134951885 HOGENOM:HOG000225142 InParanoid:Q9BW62
OMA:GVMQQIQ GenomeRNAi:84056 NextBio:73193 ArrayExpress:Q9BW62
Bgee:Q9BW62 CleanEx:HS_KATNAL1 Genevestigator:Q9BW62
GermOnline:ENSG00000102781 Uniprot:Q9BW62
Length = 490
Score = 147 (56.8 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 227 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 285
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 286 EKLVRLLFE 294
Score = 120 (47.3 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 331 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRA 387
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 388 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRIN---------- 437
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV T+ FE A++ +SV+ AD+ KYE
Sbjct: 438 GLSPEEIRALSKEELQMPV---TKGDFELALKKIAKSVSAADLEKYE 481
>UNIPROTKB|F1RST8 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K07767 OMA:GVMQQIQ
GeneTree:ENSGT00550000074466 EMBL:CU210871 RefSeq:XP_001928701.1
UniGene:Ssc.44020 ProteinModelPortal:F1RST8
Ensembl:ENSSSCT00000010220 GeneID:100156612 KEGG:ssc:100156612
Uniprot:F1RST8
Length = 490
Score = 147 (56.8 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 227 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 285
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 286 EKLVRLLFE 294
Score = 120 (47.3 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 331 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRT 387
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 388 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRIN---------- 437
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
+P A+ E+ PV T+ FE A++ +SV+ AD+ KYE
Sbjct: 438 GLSPEEIRALSKEELQMPV---TKGDFELALKKIAKSVSAADLEKYE 481
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 191 (72.3 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 222 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 281
Query: 66 EANVRDIF 73
VRD F
Sbjct: 282 AKLVRDAF 289
Score = 65 (27.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ T+ F+GA +C A +A+R+ TE+ E
Sbjct: 395 DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA-TELTHE 435
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 182 (69.1 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE FL+ G++P +GVL YGPPG GKTLLA+AIA+ ANF+ V ++ + GES
Sbjct: 158 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGES 217
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 218 ARLIREMFN 226
Score = 74 (31.1 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMET 181
++D I K+ GF+GADL IC A AIR + I + K + + +E+
Sbjct: 331 EIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLES 388
>UNIPROTKB|F6V168 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 Ensembl:ENSCAFT00000010676
EMBL:AAEX03014230 RefSeq:XP_543146.2 ProteinModelPortal:F6V168
GeneID:486020 KEGG:cfa:486020 Uniprot:F6V168
Length = 490
Score = 147 (56.8 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 227 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 285
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 286 EKLVRLLFE 294
Score = 119 (46.9 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 331 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRT 387
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 388 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING--------- 438
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
G P A+ E+ PV T+ FE A++ +SV+ AD+ KYE
Sbjct: 439 LG-PEEIRALSKEELQMPV---TKGDFELALKKIAKSVSAADLEKYE 481
>UNIPROTKB|E2QSK3 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
Ensembl:ENSCAFT00000010676 Uniprot:E2QSK3
Length = 492
Score = 147 (56.8 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 229 PMWMPD-FFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGES 287
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 288 EKLVRLLFE 296
Score = 119 (46.9 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 56 ELLTMWFGESEANVRDIFDKVTM----ENFRYAMGKSSPSALRETIVEVPNITWEDIGGL 111
ELL G A D K+ M NF + + ++ L + I +P T + G
Sbjct: 333 ELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIY-IPLPTAK--GRT 389
Query: 112 EGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
E +K L+E L D+ L IA+ G+SGAD+T +C+ A +A+R+ I
Sbjct: 390 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRING--------- 440
Query: 170 AGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE 216
G P A+ E+ PV T+ FE A++ +SV+ AD+ KYE
Sbjct: 441 LG-PEEIRALSKEELQMPV---TKGDFELALKKIAKSVSAADLEKYE 483
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 169 (64.5 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++ P+ F G +P G+L YGPPG GK+ LAKA+A E + F S+ +L++ W GES
Sbjct: 148 PIKLPQLF-SHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGES 206
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 207 ERLVRQLFE 215
Score = 91 (37.1 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 31/109 (28%), Positives = 55/109 (50%)
Query: 126 DLNYIAKVTNGFSGADLTEICQRACKLAIRQSIET-----EI--RREREKLA-----GNP 173
D +AK+T+G+SG+D++ + + A +R+ I T E+ + L G+P
Sbjct: 319 DFKELAKMTDGYSGSDISIVVRDAIMEPVRR-IHTATHFKEVYDNKSNRTLVTPCSPGDP 377
Query: 174 AA--SAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
A S+ +E ED P++T F A+R + ++N DI K+ F +
Sbjct: 378 DAFESSWLEVNPEDIMEPKLTVRDFYSAVRKVKPTLNAGDIEKHTQFTK 426
Score = 84 (34.6 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 87 KSSPSALRETI-VEVPNITWEDIGGLEGVKRELQELV 122
K SAL I VE PN+ W+DI GLE K L+E V
Sbjct: 109 KKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETV 145
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 199 (75.1 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPEKF+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ + +A++ +GA++ +C A AIR + + TE
Sbjct: 366 RDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406
>UNIPROTKB|H7C475 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC009242 EMBL:AC066692 EMBL:AC079924 HGNC:HGNC:29230
ProteinModelPortal:H7C475 Ensembl:ENST00000366438 Uniprot:H7C475
Length = 155
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 40 FPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLS 99
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 100 KWVGESERQLRLLFDQ 115
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 190 (71.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 131 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 190
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 191 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 241
Query: 124 DVD 126
+D
Sbjct: 242 QLD 244
Score = 60 (26.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 301 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 336
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 180 (68.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV+HPE F G+ +G+L YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 164 PVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEG 223
Query: 66 EANVRDIF 73
VR++F
Sbjct: 224 SRMVRELF 231
Score = 75 (31.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E P + E + + L + +DL IA+ NG SGA+L +C A A+R+
Sbjct: 312 IEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRER 371
Query: 158 IETEIRREREKLA 170
+ +E +LA
Sbjct: 372 -RVHVTQEDFELA 383
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 194 (73.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P ++ F+ ++ G+L YG PGCGKTLLA A+A +C NFISVKGPE+L + G
Sbjct: 715 WPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGA 774
Query: 65 SEANVRDIFDK 75
SE N+R++F++
Sbjct: 775 SEQNIRELFER 785
Score = 70 (29.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRA 149
L ++ DL IA+ T GFSGADL +C A
Sbjct: 892 LEKNADLKLIAEKTAGFSGADLQGLCYNA 920
>FB|FBgn0005322 [details] [associations]
symbol:nmd "no mitochondrial derivative" species:7227
"Drosophila melanogaster" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0007286 "spermatid development" evidence=TAS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048190 EMBL:AE014134
GO:GO:0005741 GO:GO:0007286 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 GeneTree:ENSGT00550000074823 EMBL:AY119493
RefSeq:NP_609373.1 UniGene:Dm.11450 SMR:Q9VL02 IntAct:Q9VL02
MINT:MINT-282656 STRING:Q9VL02 EnsemblMetazoa:FBtr0080065
GeneID:44021 KEGG:dme:Dmel_CG5395 UCSC:CG5395-RA CTD:44021
FlyBase:FBgn0005322 InParanoid:Q9VL02 OMA:EMCRNAS OrthoDB:EOG4PG4GP
GenomeRNAi:44021 NextBio:836621 Uniprot:Q9VL02
Length = 369
Score = 145 (56.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 6 PVEHPEKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
P++H + F + Q +GVL +GPPGCGKTL+AKA A E FI++ L W+GE
Sbjct: 116 PIQHKDLFKHSKLWQAPKGVLLHGPPGCGKTLIAKATAKEAGMRFINLDVAILTDKWYGE 175
Query: 65 SEANVRDIF 73
S+ +F
Sbjct: 176 SQKLTSAVF 184
Score = 115 (45.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 119 QELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSI 158
+E+ QDVDLN ++K+TNGFSG+DL E+C+ A +RQ I
Sbjct: 282 EEVSQDVDLNRLSKLTNGFSGSDLREMCRNASVYRMRQLI 321
Score = 55 (24.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 103 ITWEDIGGLEGVKRELQELV 122
++W DI GL+ V +EL+E V
Sbjct: 94 VSWADIAGLDSVIQELRESV 113
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 165 (63.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 92 (37.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
D+D I K+++GF+GADL +C A AIR E + + K A S +E++
Sbjct: 325 DIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 199 (75.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 49/123 (39%), Positives = 68/123 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE + K G++P G+L YGPPG GKT+L KA+ANE Q FI V G E + + GE
Sbjct: 157 PLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEG 216
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN SPS + I EV I + G RE+Q ++ ++
Sbjct: 217 PRMVRDVF-RLAREN--------SPSII--FIDEVDAIATKRFDAQTGADREVQRILLEL 265
Query: 126 DLN 128
LN
Sbjct: 266 -LN 267
Score = 47 (21.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
DV++ T+ S AD+ I Q A AIR++
Sbjct: 330 DVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 199 (75.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 49/123 (39%), Positives = 68/123 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE + K G++P G+L YGPPG GKT+L KA+ANE Q FI V G E + + GE
Sbjct: 157 PLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEG 216
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN SPS + I EV I + G RE+Q ++ ++
Sbjct: 217 PRMVRDVF-RLAREN--------SPSII--FIDEVDAIATKRFDAQTGADREVQRILLEL 265
Query: 126 DLN 128
LN
Sbjct: 266 -LN 267
Score = 47 (21.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
DV++ T+ S AD+ I Q A AIR++
Sbjct: 330 DVNIESFVVRTDKISAADIAAIAQEAGMQAIRKN 363
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 182 (69.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 44/121 (36%), Positives = 64/121 (52%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV+HPE F G+ +GV+ YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 167 PVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEG 226
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VR++F + E+ + ++ T VE GG V+R + EL+ +
Sbjct: 227 SRMVRELF-VMAREHAPSIIFMDEIDSIGSTRVEGSG------GGDSEVQRTMLELLNQL 279
Query: 126 D 126
D
Sbjct: 280 D 280
Score = 70 (29.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAME 180
L + ++L +A+ NG SGAD+ +C A A+R+ + +E +LA + E
Sbjct: 337 LTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRER-RIHVTQEDFELAVGKVMNKNQE 395
Query: 181 T 181
T
Sbjct: 396 T 396
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 190 (71.9 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 202 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 261
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 262 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 312
Query: 124 DVD 126
+D
Sbjct: 313 QLD 315
Score = 61 (26.5 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 372 LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRE 407
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 190 (71.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 203 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 262
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 263 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 313
Query: 124 DVD 126
+D
Sbjct: 314 QLD 316
Score = 61 (26.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 373 LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRE 408
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 180 (68.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE FL+ G++P +GVL YGPPG GKTLLA+AIA+ ANF+ + ++ + GES
Sbjct: 159 PLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGES 218
Query: 66 EANVRDIF 73
+R++F
Sbjct: 219 ARLIREMF 226
Score = 72 (30.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIR 155
++D + K+ GF+GADL +C A AIR
Sbjct: 332 EIDYEAVVKLAEGFNGADLRNVCTEAGMAAIR 363
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 191 (72.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 200 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 259
Query: 66 EANVRDIF 73
VRD F
Sbjct: 260 AKLVRDAF 267
Score = 59 (25.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
D+NY +A+ + F+GA +C A +A+R+ TE+ E
Sbjct: 373 DVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGT-TELTHE 413
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 195 (73.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 39/68 (57%), Positives = 46/68 (67%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ GVL YGPPG GKTLLA IA E NFISVKGPELL+ + G S
Sbjct: 858 PAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGAS 917
Query: 66 EANVRDIF 73
E VRD+F
Sbjct: 918 EQAVRDVF 925
Score = 68 (29.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 114 VKRELQELVQDVDLNYIAKVTNGFSGADL 142
V E L DVDL ++A +T+ F+GADL
Sbjct: 1018 VLSESLPLADDVDLQHVASLTDSFTGADL 1046
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 165 (63.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 144 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 203
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 204 ARLIREMFN 212
Score = 89 (36.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 317 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 376
Query: 184 EDDPV 188
+ PV
Sbjct: 377 DYKPV 381
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 190 (71.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 44/123 (35%), Positives = 73/123 (59%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALR-ETIVEVPNITWE-DIGGLEGVKRELQELVQ 123
VR++F +V E+ +PS + + I + ++ + GG ++R + EL+
Sbjct: 264 PKLVRELF-RVAEEH--------APSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 124 DVD 126
+D
Sbjct: 315 QLD 317
Score = 60 (26.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 89 (36.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 89 (36.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 89 (36.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 89 (36.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 165 (63.1 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 89 (36.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 189 (71.6 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + + G++P +GV+ YGPPG GKTLLAKA+AN+ A F+ V G EL+ + G+
Sbjct: 204 PLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263
Query: 66 EANVRDIFDKVTMEN 80
VR++F +V E+
Sbjct: 264 PKLVRELF-RVAEEH 277
Score = 61 (26.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
L DV L+ + + SGAD+ IC A +A+R+
Sbjct: 374 LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRE 409
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 165 (63.1 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 158 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 217
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 218 ARLIREMFN 226
Score = 89 (36.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 331 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 390
Query: 184 EDDPV 188
+ PV
Sbjct: 391 DYKPV 395
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 174 (66.3 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE FL+ G+ P +G L YGPPG GKTLLA+A+A++ ANF+ V ++ + GES
Sbjct: 160 PLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGES 219
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 220 ARLIREMFN 228
Score = 78 (32.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++ F+GADL +C A AIR E I+ + K + + +E++
Sbjct: 333 EIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKL 392
Query: 184 EDDPV 188
+ PV
Sbjct: 393 DYKPV 397
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 165 (63.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 166 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 225
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 226 ARLIREMFN 234
Score = 89 (36.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 339 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 398
Query: 184 EDDPV 188
+ PV
Sbjct: 399 DYKPV 403
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 165 (63.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 166 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 225
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 226 ARLIREMFN 234
Score = 89 (36.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 339 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 398
Query: 184 EDDPV 188
+ PV
Sbjct: 399 DYKPV 403
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 165 (63.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 166 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 225
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 226 ARLIREMFN 234
Score = 89 (36.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 339 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 398
Query: 184 EDDPV 188
+ PV
Sbjct: 399 DYKPV 403
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 174 (66.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 6 PVEHPEKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
P++ PE F +G + P +GVL YGPPG GKT+LAKAIA E +A FI+VK L++ WFG
Sbjct: 106 PLKRPELFA-YGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFG 164
Query: 64 ESEANVRDIF 73
+++ V +F
Sbjct: 165 DAQKLVSAVF 174
Score = 78 (32.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 126 DLNY--IAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRER 166
D+NY IA++ ++G+D+ E+C++A IR+ +E E +R
Sbjct: 277 DINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKR 319
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 165 (63.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +PE F + G+ P +G L YGPPG GKTLLA+A+A++ NF+ V ++ + GES
Sbjct: 152 PLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGES 211
Query: 66 EANVRDIFD 74
+R++F+
Sbjct: 212 ARLIREMFN 220
Score = 88 (36.0 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLAGNPAASAAMETED 183
++D I K+++GF+GADL +C A AIR + ++ + K A S +E++
Sbjct: 325 EIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKL 384
Query: 184 EDDPV 188
+ PV
Sbjct: 385 DYKPV 389
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 180 (68.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE
Sbjct: 164 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 223
Query: 66 EANVRDIF 73
VR++F
Sbjct: 224 SRMVRELF 231
Score = 70 (29.7 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 98 VEVPNITWEDIGGLEGVKRELQE--LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIR 155
+E PN D G L+ +K ++ L + ++L I+ NG SGA+L +C A A+R
Sbjct: 312 IEFPNPG--DAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALR 369
Query: 156 QSIETEIRREREKLAGNPAASAAMETEDEDD 186
+ + +E ++A S M+ + E +
Sbjct: 370 ER-RVHVSQEDFEMA----VSKVMKKDSEQN 395
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 181 (68.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
PV+HPE F G+ +GV+ YGPPG GKTLLA+A+A+ + FI V G EL+ + GE
Sbjct: 163 PVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEG 222
Query: 66 EANVRDIF 73
VR++F
Sbjct: 223 SRMVRELF 230
Score = 68 (29.0 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA 170
L + ++L IA+ NG SGAD+ +C A A+R+ + +E +LA
Sbjct: 333 LTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRER-RIHVTQEDFELA 381
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 194 (73.4 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 185 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 244
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 245 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 296
Query: 125 VD 126
+D
Sbjct: 297 LD 298
Score = 52 (23.4 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 357 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 397
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 209 (78.6 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 62/182 (34%), Positives = 93/182 (51%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-QAN----FISVKGPELLT 59
+P+ +PE F +F +QP RG LFYGPPG GKTL+A+A+ANEC Q N F KG + L+
Sbjct: 382 FPLLYPEVFERFKIQPPRGCLFYGPPGTGKTLVARALANECSQGNRRVAFFMRKGADCLS 441
Query: 60 MWFGESEANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQ 119
W GESE +R +FD+ Y M R +I I +++I GL V+ Q
Sbjct: 442 KWVGESERQLRLLFDQA------YQM--------RPSI-----IFFDEIDGLAPVRSSKQ 482
Query: 120 ELVQDVDLNYIAKVTNGFSGADLTEICQRACKL-AIRQSIETEIRREREKLAGNPAASAA 178
+ + ++ + + +G G + +L +I ++ R +RE L G P A
Sbjct: 483 DQIHSSIVSTLLALMDGLDGRGEVVVIGATNRLDSIDPALRRPGRFDREFLFGLPNKEAR 542
Query: 179 ME 180
E
Sbjct: 543 KE 544
Score = 45 (20.9 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 160 TEIRREREKLAGNPAASAAMETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRKYE-MF 218
T RR + +L +A M+T E V + ++ + +ADI +E ++
Sbjct: 1244 TRARRSQAELR-QMSAERVMDTVTESAAVVMVDYCELKQLLHMVTELTKEADIFHFEKLY 1302
Query: 219 AQTLQ 223
A Q
Sbjct: 1303 AAICQ 1307
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 191 (72.3 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 170 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 229
Query: 66 EANVRDIF 73
VRD F
Sbjct: 230 AKLVRDAF 237
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 191 (72.3 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H EKF G+QP +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M+ G+
Sbjct: 149 PMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDG 208
Query: 66 EANVRDIF 73
VRD F
Sbjct: 209 AKLVRDAF 216
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 198 (74.8 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 424 FPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLS 483
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 484 KWVGESERQLRLLFDQ 499
Score = 62 (26.9 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D+ L +A+ G+ GAD+ IC A A+R+ +I EKL
Sbjct: 601 DIFLEELAENCVGYCGADIKSICSEAALCALRRRYP-QIYTTSEKL 645
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 173 (66.0 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+++PE FL+ G++P +GVL YGPPG GKTLLA+A+A NF+ V ++ + GES
Sbjct: 151 PLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGES 210
Query: 66 EANVRDIF 73
+R++F
Sbjct: 211 ARIIREMF 218
Score = 77 (32.2 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 90 PSAL-RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNY--IAKVTNGFSGADLTEIC 146
P L R+ + +PN ++G +E +K L+++ + +++Y + K+T+G +GADL +
Sbjct: 291 PGRLDRKIEIPLPN----EVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVV 346
Query: 147 QRACKLAIRQS----IETEIRREREKLA 170
A +AI++ I++++ K+A
Sbjct: 347 TEAGFIAIKEDRDYVIQSDLMSAARKVA 374
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 198 (74.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 99 FPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLS 158
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 159 KWVGESERQLRLLFDQ 174
Score = 59 (25.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D+ L +A+ G+ GAD+ IC A A+R+ +I EKL
Sbjct: 276 DMFLEELAEHCVGYCGADIKSICAEAALCALRRRYP-QIYTTSEKL 320
Score = 38 (18.4 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 160 TEIRREREKLAGNPAASAAMETEDEDD 186
TE+R++R G+ +AS + ++ +
Sbjct: 910 TELRKDRIVCRGDASASQVTDIPEDSE 936
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 193 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 252
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 253 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 304
Query: 125 VD 126
+D
Sbjct: 305 LD 306
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 365 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 405
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 194 (73.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 406
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 194 (73.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 195 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 254
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 255 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 306
Query: 125 VD 126
+D
Sbjct: 307 LD 308
Score = 52 (23.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 367 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 407
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 185 (70.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H + + G+ P RGVL YGPPG GKT+LAKA+A+ A FI V G E + + GE
Sbjct: 169 PLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEG 228
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQELVQDV 125
VRD+F ++ EN SP+ + I E+ I + G RE+Q ++ ++
Sbjct: 229 PRLVRDVF-RLAREN--------SPAII--FIDEIDAIATKRFDAQTGADREVQRILMEL 277
Query: 126 DLN 128
LN
Sbjct: 278 -LN 279
Score = 62 (26.9 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 121 LVQDVDL-NYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREK 168
L +VDL +Y+++ + SGA++ ICQ A AIR++ + ++ EK
Sbjct: 339 LSDEVDLEDYVSR-PDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEK 386
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 198 (74.8 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 430 FPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLS 489
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 490 KWVGESERQLRLLFDQ 505
Score = 61 (26.5 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D+ L +A+ + G+ GAD+ +C A A+R+ +I EKL
Sbjct: 607 DMFLEELAENSVGYCGADIKSVCSEAALCALRRRYP-QIYTTSEKL 651
Score = 39 (18.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 160 TEIRREREKLAGNPAASAAMETEDEDD 186
TE+R+++ G+ ++S ++ DE++
Sbjct: 1243 TELRKDKIACNGDASSSRIIDIFDENE 1269
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 194 (73.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 194 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 254 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 305
Query: 125 VD 126
+D
Sbjct: 306 LD 307
Score = 51 (23.0 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + + TE
Sbjct: 366 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 207 (77.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 52/119 (43%), Positives = 70/119 (58%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P++HPE F K G++P +G+L YGPPG GKTLLAKA+A E A FI V G EL+ + GE
Sbjct: 189 PLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEG 248
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWEDIGGLEGVKRELQE-LVQ 123
+ V+DIF K+ E +PS + I E+ I + L G RE+Q L+Q
Sbjct: 249 ASLVKDIF-KLAKEK--------APSII--FIDEIDAIAAKRTDALTGGDREVQRTLMQ 296
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 169 (64.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 7 VEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESE 66
+ +PEK+++ G +P RGVL G PG GKTLLAKA+A E + FIS E + ++ G
Sbjct: 344 LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGA 403
Query: 67 ANVRDIFDKVTME 79
+ VRD+F + E
Sbjct: 404 SRVRDLFARAKKE 416
Score = 91 (37.1 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 94 RETIVEVPN-ITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKL 152
R VE P+ I E I + K+EL L DV+L IA +T GF+GADL + A L
Sbjct: 489 RVVTVETPDKIGRESILRVHVSKKELP-LGDDVNLGSIASMTTGFTGADLANLVNEAALL 547
Query: 153 AIRQSIETEIRR 164
A R++ +T + +
Sbjct: 548 AGRKN-KTNVEK 558
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 175 (66.7 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++ P +F++ G+ +GVL YGPPGC KT L +A+A C+ +F+SV G +L + + G+
Sbjct: 484 WPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGD 543
Query: 65 SEANVRDIF 73
SE + +F
Sbjct: 544 SEKILSQVF 552
Score = 146 (56.5 bits), Expect = 7.5e-15, Sum P(3) = 7.5e-15
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +P G++ RGVL GPPG GKT L +A+A E A ++V P L GE+
Sbjct: 219 PLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGET 278
Query: 66 EANVRDIFDK 75
E NVR IF +
Sbjct: 279 EENVRRIFKR 288
Score = 82 (33.9 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
RE ++ P + L+ + ++ + VDLN +A++T G+ GADLT +C+ A A
Sbjct: 364 REVVIGTPTLRQRK-AILQVITSKMP-ISGQVDLNLLAEMTVGYVGADLTALCREAAMQA 421
Query: 154 IRQS 157
+ S
Sbjct: 422 LLHS 425
Score = 80 (33.2 bits), Expect = 7.5e-15, Sum P(3) = 7.5e-15
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 74 DKVTME--NFRYAMGKSSPSALRETI--VEVPNITWEDIGGLEGVKRELQELVQ 123
D T++ +F A K PS+ R I ++ + WE IGGLE VK +L++ ++
Sbjct: 430 DNPTIDETDFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIE 483
Score = 75 (31.5 bits), Expect = 7.5e-15, Sum P(3) = 7.5e-15
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS-IE-TEIRRE 165
DV L +A T FSGADL +C+ A LA++++ +E T +++E
Sbjct: 688 DVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQE 731
Score = 48 (22.0 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 171 GNPAASAAMETEDEDD-PVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQ 220
GN AA+ E+ V + + HF E+++ + S++ D+ Y+ Q
Sbjct: 707 GNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSHKDLTLYKNLFQ 757
Score = 37 (18.1 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 151 KLAIRQSIETEIRRERE 167
KL ++QSIE ++ RE
Sbjct: 475 KLKLKQSIEWPLKFPRE 491
>RGD|1304849 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 RGD:1304849 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OrthoDB:EOG441Q9S
GeneTree:ENSGT00550000074694 IPI:IPI00557599
Ensembl:ENSRNOT00000008508 UCSC:RGD:1304849 ArrayExpress:D3ZJD2
Uniprot:D3ZJD2
Length = 1373
Score = 199 (75.1 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 2 ISTYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPE 56
+S P+ H ++KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG +
Sbjct: 426 LSLIPIIHMMTYIKFKIQPPRGCLFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGAD 485
Query: 57 LLTMWFGESEANVRDIFDKV 76
L+ W GESE+ +R +FD++
Sbjct: 486 CLSKWVGESESQLRLLFDQI 505
Score = 59 (25.8 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D+ L +A+ G+ GAD+ IC A A+R+ +I EKL
Sbjct: 606 DMFLEELAENCVGYCGADIKSICAEAALCALRRRYP-QIYTTSEKL 650
Score = 40 (19.1 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 155 RQSIE-TEIRREREKLAGNPAASAAMETEDEDD 186
+Q+ E TE+++ R +G+ A S + +E++
Sbjct: 1237 KQTAEGTELKKARIVCSGDAATSQVTDIAEENE 1269
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 194 (73.4 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE+F+ G++P +GVL +GPPG GKTL A+A+AN A FI V G EL+ + GE
Sbjct: 236 PLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 295
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWED-IGGLEGVKRELQELVQD 124
VR++F+ A K + + I + ++D GG V+R + EL+
Sbjct: 296 ARMVRELFEM--------ARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQ 347
Query: 125 VD 126
+D
Sbjct: 348 LD 349
Score = 52 (23.4 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 123 QDVDLNYIAKVTNGFSGADLTEICQRACKLAIR--QSIETE 161
+D+ +A++ +GA++ +C A AIR + I TE
Sbjct: 408 RDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATE 448
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 171 (65.3 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 5 YPVEHPEKFLKFGM-QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 63
YP+ PE + + Q GVL YGPPGCGKT+LAKA+A E ANFIS++ ++ W+G
Sbjct: 109 YPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYG 168
Query: 64 ESEANVRDIF 73
ES V +F
Sbjct: 169 ESNKIVDAMF 178
Score = 76 (31.8 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIE 159
+ DL IA T GFSG+DL E+C+ A A ++ I+
Sbjct: 280 EFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIK 315
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 184 (69.8 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 41/73 (56%), Positives = 44/73 (60%)
Query: 7 VEHPEKFLK-FGMQPSR---GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 62
+E P KF K F P R VL YGPPGCGKT + A A C FISVKGPELL +
Sbjct: 860 IELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYI 919
Query: 63 GESEANVRDIFDK 75
G SE VRDIF K
Sbjct: 920 GASEQAVRDIFSK 932
Score = 85 (35.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 13 FLKFGMQPSRG-VLFYGPPGCGKTLLAKAIA 42
F KF + PS G +L YGPPG GKT+LA+A A
Sbjct: 585 FSKFKI-PSPGHILIYGPPGSGKTILARAAA 614
Score = 76 (31.8 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRRE 165
+ D+DL IA +T GFSGADL + A A+ + + E + E
Sbjct: 1030 MADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPE 1074
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRE---TIVEVPNITWEDIGGLEGVKRELQELV 122
E+N+ + E+F AM P A+R+ + E + WED+GG+ +K ++E++
Sbjct: 803 ESNISKY--NLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMI 860
Query: 123 Q 123
+
Sbjct: 861 E 861
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 180 (68.4 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H ++F+ G+ P +GVL YGPPG GKT++A+A+A + ++ F+ + GP+L+ M+ G+
Sbjct: 196 PMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDG 255
Query: 66 EANVRDIF 73
VRD F
Sbjct: 256 AKLVRDAF 263
Score = 68 (29.0 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E+P+ + + + + +DV+ +A+ T+ F+GA +C A +A+R+
Sbjct: 343 IELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRD 402
Query: 158 IETEIRRE 165
TEI E
Sbjct: 403 A-TEILHE 409
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 180 (68.4 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ H ++F+ G+ P +GVL YGPPG GKT++A+A+A + ++ F+ + GP+L+ M+ G+
Sbjct: 196 PMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDG 255
Query: 66 EANVRDIF 73
VRD F
Sbjct: 256 AKLVRDAF 263
Score = 68 (29.0 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 98 VEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS 157
+E+P+ + + + + +DV+ +A+ T+ F+GA +C A +A+R+
Sbjct: 343 IELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRD 402
Query: 158 IETEIRRE 165
TEI E
Sbjct: 403 A-TEILHE 409
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 189 (71.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/70 (54%), Positives = 46/70 (65%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P ++PE F ++ GVL YG PG GKTLLA +A E NFISVKGPELL+ + G S
Sbjct: 867 PAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGAS 926
Query: 66 EANVRDIFDK 75
E VRDIF +
Sbjct: 927 EQAVRDIFSR 936
Score = 70 (29.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 35/145 (24%), Positives = 60/145 (41%)
Query: 111 LEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKLA 170
L+ + L L DVDL Y+A T F+GADL + A AI ++ + + ++ +
Sbjct: 1025 LKALSHSLS-LANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIH-NLSSGLTQDFGSSS 1082
Query: 171 GNPAASAAM----ETEDEDDPVPEITRAHFEEAMRFARRSVNDADIRK--YEM-FAQTLQ 223
+ + ++M + DD + A + + + D R Y + F + +
Sbjct: 1083 DSDFSLSSMVFLNHSSGSDDSAIDGEAAPEQSLISLDMSELLPEDSRSNMYRLYFGSSYE 1142
Query: 224 QSRGFGTNFRFPSNPNQSQSGGPNS 248
G GT PS + GPNS
Sbjct: 1143 SELGNGT----PSELSSLCLSGPNS 1163
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 197 (74.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 308 FPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLS 367
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 368 KWVGESERQLRLLFDQ 383
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 116 RELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
R+ + D L +A+ G+ GAD+ +C A +A+R+
Sbjct: 477 RDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRR 517
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 148 (57.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ P+ F K +P +GVL GPPG GKT+LAKA+A EC F +V L + + GES
Sbjct: 253 PLWMPDYF-KGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGES 311
Query: 66 EANVRDIFD 74
E VR +F+
Sbjct: 312 EKLVRLLFE 320
Score = 108 (43.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 92 ALRETIVEVPNITWEDIGGLEGVKR-ELQE--LVQDVDLNYIAKVTNGFSGADLTEICQR 148
ALR + + I +I G E + R L+E L D+DL IA+ +G+SGAD+T +C+
Sbjct: 393 ALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRD 452
Query: 149 ACKLAIRQSIE----TEIRREREKLAGNPAASA 177
A +A+R+ I+ EIR ++ P+ A
Sbjct: 453 ASMMAMRRRIQGLRPEEIRHIPKEELNQPSTPA 485
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 168 (64.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ PE F++ G++ +GVL YGPPG GKTLLA+AIA+ +ANF+ V ++ + GES
Sbjct: 156 PLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGES 215
Query: 66 EANVRDIF 73
+R++F
Sbjct: 216 ARVIREMF 223
Score = 80 (33.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 90 PSAL-RETIVEVPNITWEDIGGLEGVKRELQELVQ--DVDLNYIAKVTNGFSGADLTEIC 146
P L R+ + +PN + G ++ +K + + DVD IAK+ +GF+ ADL +C
Sbjct: 296 PGRLDRKIEIPLPN----EAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVC 351
Query: 147 QRACKLAIR 155
A AIR
Sbjct: 352 TEAGMFAIR 360
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 197 (74.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 256 FPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLS 315
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 316 KWVGESERQLRLLFDQ 331
Score = 59 (25.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 116 RELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQ 156
R+ + D L +A+ G+ GAD+ +C A +A+R+
Sbjct: 425 RDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRR 465
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 177 (67.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ HPE + G++P +GV+ YG PG GKTLLAKA+AN A F+ V G EL+ + G+
Sbjct: 207 PLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDG 266
Query: 66 EANVRDIFDKVTMENFRYAMGKSSPSALRETIVEVPNITWE-DIGGLEGVKRELQELVQD 124
VR++F R A S + I V ++ + GG ++R + EL+
Sbjct: 267 PKLVRELF--------RVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQ 318
Query: 125 VD 126
+D
Sbjct: 319 LD 320
Score = 71 (30.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 121 LVQDVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS----IETEIRREREKL 169
L +DV+L + FSGAD+ IC A LA+R+ + ++ +EK+
Sbjct: 377 LAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKV 429
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 169 (64.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 64
+P++ P +F++ G+ +GVL YGPPGC KT L +A+A C +F+SV G +L + + G+
Sbjct: 474 WPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGD 533
Query: 65 SE 66
SE
Sbjct: 534 SE 535
Score = 142 (55.0 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 6 PVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 65
P+ +P G+ RGVL GPPG GKT L +A+A E A ++V P L GE+
Sbjct: 209 PLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGET 268
Query: 66 EANVRDIFDK 75
E NVR +F +
Sbjct: 269 EENVRRVFGR 278
Score = 80 (33.2 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 80 NFRYAMGKSSPSALRETI--VEVPNITWEDIGGLEGVKRELQELVQ 123
+F A K PS+ R I +++ + WE IGGLE VK +L++ ++
Sbjct: 428 DFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIE 473
Score = 77 (32.2 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQS-IETEIRREREKLAGNPAASAAMETE 182
DV L IA T FSGADL +C+ A LA++++ +E ++ L ++ E
Sbjct: 668 DVSLENIAAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPE 727
Query: 183 D 183
D
Sbjct: 728 D 728
Score = 77 (32.2 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 94 RETIVEVPNITWEDIGGLEGVKRELQELVQDVDLNYIAKVTNGFSGADLTEICQRACKLA 153
RE ++ P + L+ + ++ + VDL+ +A++T G+ GADLT +C+ A A
Sbjct: 354 REVVIGTPTLKQRK-AILQVITSKMP-ISSQVDLSLLAEMTVGYVGADLTALCREAALHA 411
Query: 154 IRQS 157
+ S
Sbjct: 412 LLHS 415
Score = 47 (21.6 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 171 GNPAASAAMETEDEDD-PVPEITRAHFEEAMRFARRSVNDADIRKYEMFAQTLQQSRGF 228
GN AA+ E+ + + HF ++++ + S++ D+ YE L Q +GF
Sbjct: 687 GNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYE----NLFQKQGF 741
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 151 KLAIRQSIETEIRRERE 167
KL ++QSIE ++ RE
Sbjct: 465 KLKLKQSIEWPLKFPRE 481
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 198 (74.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 5 YPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISVKGPELLT 59
+P+ +PE F KF +QP RG LFYGPPG GKTL+A+A+ANEC F KG + L+
Sbjct: 444 FPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLS 503
Query: 60 MWFGESEANVRDIFDK 75
W GESE +R +FD+
Sbjct: 504 KWVGESERQLRLLFDQ 519
Score = 58 (25.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 124 DVDLNYIAKVTNGFSGADLTEICQRACKLAIRQSIETEIRREREKL 169
D L +A+ G+ GAD+ IC A A+R+ +I EKL
Sbjct: 621 DTFLEELAENCVGYCGADIKSICAEAALCALRRRYP-QIYTTSEKL 665
WARNING: HSPs involving 379 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 299 299 0.00095 115 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 629
No. of states in DFA: 605 (64 KB)
Total size of DFA: 203 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.80u 0.10s 31.90t Elapsed: 00:00:06
Total cpu time: 31.84u 0.10s 31.94t Elapsed: 00:00:07
Start: Thu Aug 15 17:26:31 2013 End: Thu Aug 15 17:26:38 2013
WARNINGS ISSUED: 2