BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13774
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/85 (94%), Positives = 83/85 (97%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPCVLFFDELDSIAK+RGGSVGD GGAADRVINQ+LTEMDGM AKKNVFIIGATNR
Sbjct: 571 ARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNR 630
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPA+LRPGRLDQLIYIPLPDE
Sbjct: 631 PDIIDPAVLRPGRLDQLIYIPLPDE 655
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 14 APCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDII 73
+P +LF DE+D+IA R + G+ R+++Q+LT MDG+ + +V +I ATNRP+ I
Sbjct: 302 SPAILFIDEIDAIAPKREKAHGE---VEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSI 358
Query: 74 DPAILRPGRLDQLIYIPLPDEI 95
D A+ R GR D+ I I +PD +
Sbjct: 359 DGALRRFGRFDREIDIGIPDAV 380
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/85 (94%), Positives = 84/85 (98%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR+AAPCVLFFDELDSIAK+RGG+VGD GGAADRVINQILTEMDGMGAKKNVFIIGATNR
Sbjct: 563 ARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNR 622
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPD+
Sbjct: 623 PDIIDPAILRPGRLDQLIYIPLPDD 647
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A +P ++F DE+D+IA R + G+ R+++Q+LT MDGM ++ ++ ATNR
Sbjct: 290 AEKNSPAIIFIDEIDAIAPKRDKTHGE---VERRIVSQLLTLMDGMKKSSHLIVMAATNR 346
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ I I +PD
Sbjct: 347 PNSIDPALRRFGRFDREIDIGIPD 370
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR +APCVLFFDELDSIA RG SVGD GGAADRV+NQ+LTEMDGM AKK VFIIGATNR
Sbjct: 570 ARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNR 629
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPA+LRPGRLDQLIYIPLPDE
Sbjct: 630 PDIIDPALLRPGRLDQLIYIPLPDE 654
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ R+++Q+LT MDG+ ++ +V +IGATNR
Sbjct: 297 AEKNAPSIIFIDEIDSIAPKREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNR 353
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
P+ IDPA+ R GR D+ I I +PDE+
Sbjct: 354 PNSIDPALRRFGRFDREIDIGVPDEV 379
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR +APCVLFFDELDSIA RG SVGD GGAADRV+NQ+LTEMDGM AKK VFIIGATNR
Sbjct: 570 ARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNR 629
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPA+LRPGRLDQLIYIPLPDE
Sbjct: 630 PDIIDPALLRPGRLDQLIYIPLPDE 654
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ R+++Q+LT MDG+ ++ +V ++GATNR
Sbjct: 297 AEKNAPSIIFIDEIDSIAPKREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNR 353
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
P+ IDPA+ R GR D+ I I +PDEI
Sbjct: 354 PNSIDPALRRFGRFDREIDIGVPDEI 379
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 80/85 (94%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAP V+F DELDSIAK+RGGS+GD GGA+DRV+NQ+LTEMDGM AKKNVF+IGATNR
Sbjct: 576 ARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNR 635
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PD IDPAILRPGRLDQLIY+PLPDE
Sbjct: 636 PDQIDPAILRPGRLDQLIYVPLPDE 660
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ RV++Q+LT MDGM A+ NV +I ATNR
Sbjct: 303 AEKNAPAIIFIDEIDSIAPKRDKTNGE---VERRVVSQLLTLMDGMKARSNVVVIAATNR 359
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 360 PNSIDPALRRFGRFDREVDIGIPD 383
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 77/85 (90%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR +APCVLFFDELDSIA RG S GD GGAADRV+NQ+LTEMDGM AKK VFIIGATNR
Sbjct: 570 ARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNR 629
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPA+LRPGRLDQLIYIPLPDE
Sbjct: 630 PDIIDPALLRPGRLDQLIYIPLPDE 654
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ R+++Q+LT MDG+ ++ +V ++GATNR
Sbjct: 297 AEKNAPSIIFIDEIDSIAPKREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNR 353
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
P+ IDPA+ R GR D+ I I +PDE+
Sbjct: 354 PNSIDPALRRFGRFDREIDIGVPDEV 379
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 76/85 (89%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR +APCVLFFDELDSIA RG S GD GGAADRV+NQ+LTEMDGM AKK VFIIGATNR
Sbjct: 569 ARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNR 628
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIID A+LRPGRLDQLIYIPLPDE
Sbjct: 629 PDIIDSALLRPGRLDQLIYIPLPDE 653
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ R+++Q+LT MDG+ ++ +V ++GATNR
Sbjct: 296 AEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNR 352
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
P+ IDPA+ R GR D+ I I +PDEI
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEI 378
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 79/85 (92%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPCV+F DELDSIAKSRGGSVGD GGA+DRV+NQ+LTEMDGM +KKNVF+IGATNR
Sbjct: 588 ARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNR 647
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
P+ +D A++RPGRLD L+Y+PLPD+
Sbjct: 648 PEQLDAALVRPGRLDTLVYVPLPDQ 672
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A +P ++F DE+DSIA R + G+ RV++Q+LT MDGM A+ NV ++ ATNR
Sbjct: 314 AEKNSPAIIFIDEIDSIAPKREKTNGE---VERRVVSQLLTLMDGMKARSNVVVMAATNR 370
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 371 PNSIDPALRRFGRFDREVDIGIPD 394
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/85 (94%), Positives = 83/85 (97%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG+VGDGGGAADRVINQILTEMDGM +KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/85 (92%), Positives = 82/85 (96%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDELDSIAK+RGG++GDGGGAADRVINQILTEMDGM KKNVFIIGATNR
Sbjct: 566 ARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNR 625
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPAILRPGRLDQLIYIPLPDE
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDE 650
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DELD+IA R + G+ R+++Q+LT MDG+ + +V ++ ATNR
Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGLKQRAHVIVMAATNR 349
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + I +PD
Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPD 373
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/86 (87%), Positives = 79/86 (91%), Gaps = 1/86 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGA-ADRVINQILTEMDGMGAKKNVFIIGATN 68
ARAAAPCVLFFDELDSIAK+RGG G GG +DRVINQ+LTEMDGM AKKNVFIIGATN
Sbjct: 572 ARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATN 631
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPDE 94
RPDIIDPA+LRPGRLDQLIYIPLPDE
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDE 657
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 15 PCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIID 74
P +LF DE+D+IA R + G+ R+++Q+LT MDG+ + N+ +I ATNRP+ ID
Sbjct: 304 PAILFIDEIDAIAPKREKTNGE---VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 75 PAILRPGRLDQLIYIPLPDEI 95
A+ R GR D+ I I +PD +
Sbjct: 361 GALRRFGRFDREIDIGIPDAV 381
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAPCVLFFDE+DSIAK+R G+ G GA DR++NQ+L+EMDG+ KKNVF+IGATNR
Sbjct: 570 ARGAAPCVLFFDEIDSIAKARSGNDG-SSGATDRMLNQLLSEMDGINQKKNVFVIGATNR 628
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PD +D A++RPGRLDQL+YIPLPD
Sbjct: 629 PDQLDSALMRPGRLDQLVYIPLPD 652
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A +P ++F DE+D++A R S G+ R+++Q+LT MDGM A+ NV ++GATNR
Sbjct: 297 AEKNSPAIIFIDEIDALAPKREKSQGE---VERRIVSQLLTLMDGMKARSNVIVLGATNR 353
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
P+ IDPA+ R GR D+ I I +PDE
Sbjct: 354 PNSIDPALRRYGRFDREIEIGVPDE 378
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPCV+F DELDSIAK+RG S GD GG RV+NQ+LTEMDG+ +KKNVF+IGATNR
Sbjct: 586 ARAAAPCVVFLDELDSIAKARGASAGDSGGGD-RVVNQLLTEMDGVNSKKNVFVIGATNR 644
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PD IDPA++RPGRLDQLIY+PLPDE
Sbjct: 645 PDQIDPALMRPGRLDQLIYVPLPDE 669
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A +P ++F DE+DSIA R + G RV++Q+LT MDGM A+ NV ++ ATNR
Sbjct: 313 AEKNSPAIIFIDEIDSIAPKREKT---NGEVERRVVSQLLTLMDGMKARSNVVVMAATNR 369
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ IDPA+ R GR D+ + + +PD
Sbjct: 370 PNSIDPALRRFGRFDREVDVGIPD 393
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAAD-RVINQILTEMDGMGAKKNVFIIGATN 68
AR +APCVLFFDELDSIA RGG G GG A RV+NQ+LTEMDGM AKK VFIIGATN
Sbjct: 569 ARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATN 628
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPDE 94
RPDIID A+LRPGRLDQLIYIPLPDE
Sbjct: 629 RPDIIDSALLRPGRLDQLIYIPLPDE 654
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+DSIA R + G+ R+++Q+LT MDG+ ++ +V ++GATNR
Sbjct: 296 AEKNAPSIIFIDEIDSIAPKREKTNGE---VERRIVSQLLTLMDGLKSRAHVIVMGATNR 352
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
P+ IDPA+ R GR D+ I I +PDEI
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEI 378
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 123 bits (308), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAA+PC++FFDE+DS+AK R + + A+DRVINQILTE+DG+ KK +FII ATNR
Sbjct: 1023 ARAASPCIIFFDEIDSLAKERNSNTNND--ASDRVINQILTEIDGINEKKTIFIIAATNR 1080
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PDI+D A+ RPGRLD+LIYI LPD
Sbjct: 1081 PDILDKALTRPGRLDKLIYISLPD 1104
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A PC++F DE+DSIA R S + RV++Q+LT MDG+ NV ++ ATNR
Sbjct: 616 ASEKTPCIIFIDEIDSIANKRSKSNNE---LEKRVVSQLLTLMDGLKKNNNVLVLAATNR 672
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
P+ IDPA+ R GR D+ I IP+PDE
Sbjct: 673 PNSIDPALRRFGRFDREIEIPVPDE 697
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 118 bits (296), Expect = 9e-27, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPC++FFDELDS+A SRG S GD GG DRV++Q+L E+DG+ + ++VF+IGATNR
Sbjct: 790 ARAAAPCIIFFDELDSLAPSRGRS-GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNR 848
Query: 70 PDIIDPAILRPGRLDQLIYI 89
PD++DPA+LRPGR D+L+++
Sbjct: 849 PDLLDPALLRPGRFDKLVFV 868
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 117 bits (294), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPC++FFDELDS+A SRG S GD GG DRV++Q+L E+DG+ + ++VF+IGATNR
Sbjct: 793 ARAAAPCIIFFDELDSLAPSRGRS-GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNR 851
Query: 70 PDIIDPAILRPGRLDQLIYI 89
PD++DPA+LRPGR D+L+++
Sbjct: 852 PDLLDPALLRPGRFDKLVFV 871
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 117 bits (294), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARAAAPC++FFDELDS+A SRG S GD GG DRV++Q+L E+DG+ + ++VF+IGATNR
Sbjct: 792 ARAAAPCIIFFDELDSLAPSRGRS-GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNR 850
Query: 70 PDIIDPAILRPGRLDQLIYI 89
PD++DPA+LRPGR D+L+++
Sbjct: 851 PDLLDPALLRPGRFDKLVFV 870
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR A PCV+FFDELDS+A SRG D GG DRV++Q+L E+DGM +VFIIGATNR
Sbjct: 1007 ARQAKPCVIFFDELDSLAPSRGNG-ADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNR 1065
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PD++D +++RPGRLD+L+Y+ + E
Sbjct: 1066 PDLLDSSLMRPGRLDRLLYLGISSE 1090
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN-VFIIGATN 68
AR A PCV+FFDE+DS+A RG GD GG DR+++Q+L E+DGM + VF+IGATN
Sbjct: 820 AREAKPCVIFFDEIDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATN 878
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPD 93
RPD++D A+LRPGR D+L+Y+ +PD
Sbjct: 879 RPDLLDEALLRPGRFDKLLYLGIPD 903
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR +APC++FFDE+D+IA RG + D+V+NQ+LTE+DGM K+V +I ATNR
Sbjct: 541 ARQSAPCIIFFDEIDAIAPKRGRDLS--SAVTDKVVNQLLTELDGMEEPKDVVVIAATNR 598
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDIIDPA+LRPGRLD++I +P+PDE
Sbjct: 599 PDIIDPALLRPGRLDRVILVPVPDE 623
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A AP ++F DE+D+IA R + G+ R++ Q+LT MDG+ + V +IGATNR
Sbjct: 268 AEENAPSIIFIDEIDAIAPKRDEATGE---VERRLVAQLLTLMDGLKGRGQVVVIGATNR 324
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
P+ +DPA+ RPGR D+ I I +PD
Sbjct: 325 PNALDPALRRPGRFDREIVIGVPD 348
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 8 SMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGAT 67
S A+ A PCVLFFDE DS+A RG D G DRV+NQILT+MDG + V+I+ AT
Sbjct: 693 SRAQMAKPCVLFFDEFDSVAPRRGQ---DSTGVTDRVVNQILTQMDGAESLDGVYIVAAT 749
Query: 68 NRPDIIDPAILRPGRLDQLIYIPLPDE 94
RPD+IDPA+LRPGRLD+LI+ LP+E
Sbjct: 750 TRPDMIDPALLRPGRLDKLIFCDLPNE 776
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMG-AKKNVFIIGATN 68
AR+A PCV+FFDELDS+A +RG S GD GG DRV++Q+L E+DG+ + +++FIIGA+N
Sbjct: 746 ARSARPCVIFFDELDSLAPARGAS-GDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASN 804
Query: 69 RPDIIDPAILRPGRLDQLIYI 89
RPD+IDPA+LRPGR D+L+Y+
Sbjct: 805 RPDLIDPALLRPGRFDKLLYV 825
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 112 bits (280), Expect = 8e-25, Method: Composition-based stats.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 8/99 (8%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A+AA PC+LFFDE +SIA RG D G DRV+NQ+LT++DG+ + V+++ AT+R
Sbjct: 929 AQAAKPCILFFDEFESIAPRRGH---DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSR 985
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD-----EIWLILSDKF 103
PD+IDPA+LRPGRLD+ +Y P PD EI +LSD
Sbjct: 986 PDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSL 1024
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A+AA PC+LFFDE +SIA RG D G DRV+NQ+LT++DG+ + V+++ AT+R
Sbjct: 930 AQAAKPCILFFDEFESIAPRRGH---DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSR 986
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDEI 95
PD+IDPA+LRPGRLD+ +Y P PD++
Sbjct: 987 PDLIDPALLRPGRLDKCVYCPPPDQV 1012
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN-VFIIGATN 68
AR A PCV+FFDE+DS+A RG GD GG DR+++Q+L E+DGM + + VFIIGATN
Sbjct: 806 ARDAKPCVIFFDEVDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATN 864
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPD 93
RPD++D A+LRPGR D+LIY+ + D
Sbjct: 865 RPDLLDEALLRPGRFDKLIYLGIAD 889
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/85 (56%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN-VFIIGATN 68
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DGM + + VF+IGATN
Sbjct: 790 ARDAKPCVIFFDELDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATN 848
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPD 93
RPD++D A+LRPGR D+++Y+ + D
Sbjct: 849 RPDLLDEALLRPGRFDKMLYLGISD 873
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 110 bits (275), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARA AP ++FFDELD++A RG S G G ADRV+ Q+LTEMDG+ KNV ++ ATNR
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSSG-AGNVADRVLAQLLTEMDGIEQLKNVTVLAATNR 774
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PD ID A++RPGR+D++IY+PLPD
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPD 798
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 15 PCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN---VFIIGATNRPD 71
P ++F DELD++ R G+ + RV+ +LT MDG+G++ + V ++GATNRP
Sbjct: 447 PSIIFIDELDALCPKREGAQSE---VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQ 503
Query: 72 IIDPAILRPGRLDQLIYIPLPD 93
+D A+ RPGR D+ I I +P+
Sbjct: 504 ALDAALRRPGRFDKEIEIGIPN 525
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/83 (61%), Positives = 66/83 (79%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A A++PCV+FFDE D++A RGG G G A +RV+NQ+LTEMDG+ + VFII ATNR
Sbjct: 655 AAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNR 714
Query: 70 PDIIDPAILRPGRLDQLIYIPLP 92
PDIID A+ RPGRLD+++Y+PLP
Sbjct: 715 PDIIDAAMCRPGRLDKMVYVPLP 737
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 53/143 (37%)
Query: 2 RIATGASMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMG----- 56
R+ T S A A APC++F DE+D+IA R + D R+++Q+LT MD +
Sbjct: 297 RVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKD---MERRIVSQLLTCMDSLNYLSSN 353
Query: 57 ---------------------------------------------AKKNVFIIGATNRPD 71
K +V +IGATNRP+
Sbjct: 354 NSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPE 413
Query: 72 IIDPAILRPGRLDQLIYIPLPDE 94
+D A+ GR D+ I + +PD+
Sbjct: 414 SLDTALRIGGRFDKEICLGIPDQ 436
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR APCV+FFDE+DS+A RGG +GD +RV++Q+LTE+DG+ K+V +I ATNR
Sbjct: 544 ARQVAPCVIFFDEIDSLAPRRGG-IGDSH-VTERVVSQLLTELDGLEELKDVVVIAATNR 601
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PD+IDPA+LRPGRL++ IYIP PD
Sbjct: 602 PDMIDPALLRPGRLERHIYIPPPD 625
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A+ AP ++F DE+DSIA R G+ RV+ Q+L MDG+ A+ +V +I ATNR
Sbjct: 271 AKENAPSIIFIDEIDSIAPKREEVTGE---VERRVVAQLLALMDGLEARGDVIVIAATNR 327
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PD IDPA+ RPGR D+ I I +PD
Sbjct: 328 PDAIDPALRRPGRFDREIEIGVPD 351
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARA AP ++FFDELD++A RG S+G G ADRV+ Q+LTEMDG+ K+V I+ ATNR
Sbjct: 716 ARAVAPSIIFFDELDALAVERGSSLG-AGNVADRVLAQLLTEMDGIEQLKDVTILAATNR 774
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PD ID A++RPGR+D++IY+PLPD
Sbjct: 775 PDRIDKALMRPGRIDRIIYVPLPD 798
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 15 PCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN---VFIIGATNRPD 71
P ++F DELD++ R G+ + RV+ +LT MDG+G++ + V ++GATNRP
Sbjct: 447 PSIIFIDELDALCPKREGAQNE---VEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPH 503
Query: 72 IIDPAILRPGRLDQLIYIPLPD 93
+D A+ RPGR D+ I I +P+
Sbjct: 504 ALDAALRRPGRFDKEIEIGVPN 525
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
Query: 8 SMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGAT 67
S A AAAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT
Sbjct: 931 SKAAAAAPCILFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFAAT 987
Query: 68 NRPDIIDPAILRPGRLDQLIYIPLPD-----EIWLILSDKFL 104
+RPD++DPA+LRPGRLD+L+ P EI +LS K L
Sbjct: 988 SRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLL 1029
>sp|Q74Z13|PEX6_ASHGO Peroxisomal biogenesis factor 6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX6
PE=3 SV=1
Length = 1021
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN-VFIIGATN 68
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DG+ + +F+IGATN
Sbjct: 811 ARDAKPCVIFFDELDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGLSTGGDGLFVIGATN 869
Query: 69 RPDIIDPAILRPGRLDQLIYIPLPD 93
RPD++D A+LRPGR D+L+Y+ + D
Sbjct: 870 RPDLLDEALLRPGRFDKLLYLGISD 894
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/88 (55%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN----VFIIG 65
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DGM + VF+IG
Sbjct: 1082 ARDARPCVVFFDELDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIG 1140
Query: 66 ATNRPDIIDPAILRPGRLDQLIYIPLPD 93
ATNRPD++DPA+LRPGR D+++Y+ + D
Sbjct: 1141 ATNRPDLLDPALLRPGRFDKMLYLGVSD 1168
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN--VFIIGAT 67
AR ++PCV+FFDELDSIA RG S D G DRV++Q+L E+D + N VF+IGAT
Sbjct: 743 ARNSSPCVIFFDELDSIAPHRGNS-SDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGAT 801
Query: 68 NRPDIIDPAILRPGRLDQLIYI 89
NRPD++DP++LRPGR D+L+Y+
Sbjct: 802 NRPDLLDPSLLRPGRFDKLVYL 823
>sp|Q9UVU5|PEX6_PICAN Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1
Length = 1135
Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN---VFIIGA 66
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DGM + VF++GA
Sbjct: 901 ARDAKPCVIFFDELDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGA 959
Query: 67 TNRPDIIDPAILRPGRLDQLIYIPLPD 93
TNRPD++D A+LRPGR D+++Y+ + D
Sbjct: 960 TNRPDLLDEALLRPGRFDKMLYLGIAD 986
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 106 bits (264), Expect = 5e-23, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAK--KNVFIIGAT 67
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DGM + VF++GAT
Sbjct: 807 ARDAKPCVVFFDELDSVAPQRGNQ-GDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGAT 865
Query: 68 NRPDIIDPAILRPGRLDQLIYIPLPD 93
NRPD++D A+LRPGR D+++Y+ + D
Sbjct: 866 NRPDLLDEALLRPGRFDKMLYLGISD 891
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A +PCV+ L+SIAK + G G ++++ +L + G G V + +N
Sbjct: 525 AYGCSPCVVVLQHLESIAK-KSDQDGKDEGIVSKLVD-VLADYSGHG----VLLAATSND 578
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PD I AI R I I +P E
Sbjct: 579 PDKISEAI--RSRFQFEIEIGVPSE 601
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/93 (51%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 1 MRIATGASMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN 60
+ I T AR APCV+FFDE+D++ SRG +G +R++NQ L E+DG G ++N
Sbjct: 608 LAIRTLFQRARTCAPCVIFFDEVDALTTSRGK---EGAWVVERLLNQFLVELDG-GERRN 663
Query: 61 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 93
V++IGATNRPD++DPA LRPGR L+Y+PLP+
Sbjct: 664 VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPN 696
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 8 SMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN------- 60
S A AP ++F DE+D+I R + R++ Q+LT MDG G K +
Sbjct: 320 SKAYRTAPSIVFIDEIDAIGSKRENQQRE---MEKRIVTQLLTCMDGPGNKGDKNAPDSS 376
Query: 61 ---VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 94
V +IGATNRPD +DPA+ R GR + I + PDE
Sbjct: 377 AGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDE 413
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
AR AAP V+FFDE+DSIA RG S G +R++NQ+L EMDG+ V II ATNR
Sbjct: 576 ARQAAPTVIFFDEIDSIAPIRGLSTD--SGVTERIVNQLLAEMDGIVPLNKVVIIAATNR 633
Query: 70 PDIIDPAILRPGRLDQLIYIPLPDE 94
PDI+DPA+LRPGR D+LIY+P PD+
Sbjct: 634 PDILDPALLRPGRFDRLIYVPPPDK 658
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 1 MRIATGASMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN 60
RI A AP ++F DE+D+IA R G+ RV+ Q+LT MDG+ +
Sbjct: 292 QRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTGE---VEKRVVAQLLTLMDGIKGRGR 348
Query: 61 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 93
V +IGATNRPD IDPA+ RPGR D+ I I PD
Sbjct: 349 VIVIGATNRPDAIDPALRRPGRFDREIEIRPPD 381
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 105 bits (262), Expect = 7e-23, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 8 SMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGAT 67
S A +A PCVLFFDE DSIA RG D G DRV+NQ LT++DG+ V+++ AT
Sbjct: 953 SRASSAKPCVLFFDEFDSIAPRRGH---DNSGVTDRVVNQFLTQLDGVEGLTGVYVLAAT 1009
Query: 68 NRPDIIDPAILRPGRLDQLIYIPLPD 93
+RPD+IDPA+LRPGRLD+ +Y +P+
Sbjct: 1010 SRPDLIDPALLRPGRLDKSLYCNIPE 1035
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
Query: 8 SMARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGAT 67
+ ARA+ PCV+FFDELD++ R S+ + ++ RV+N +LTE+DG+ ++ +F+IGAT
Sbjct: 620 TRARASVPCVIFFDELDALVPRRDTSLSE---SSSRVVNTLLTELDGLNDRRGIFVIGAT 676
Query: 68 NRPDIIDPAILRPGRLDQLIYIPLPD 93
NRPD+IDPA+LRPGRLD+ ++I LP+
Sbjct: 677 NRPDMIDPAMLRPGRLDKSLFIELPN 702
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAAD---RVINQILTEMDGMGAKKN----VF 62
AR+ APC++FFDE+D+I R DGG + R++ Q+LT MD + +K V
Sbjct: 294 ARSLAPCLVFFDEIDAITPKR-----DGGAQREMERRIVAQLLTSMDELTMEKTNGKPVI 348
Query: 63 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEI 95
IIGATNRPD +D A+ R GR D+ I + +P+E+
Sbjct: 349 IIGATNRPDSLDAALRRAGRFDREICLNVPNEV 381
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/83 (57%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
A+ +APCV+FFDE+D++ R GA+ RV+NQ+LTEMDG+ A++ VFI+ ATNR
Sbjct: 670 AKNSAPCVIFFDEVDALCPRRSDR---ETGASVRVVNQLLTEMDGLEARQQVFIMAATNR 726
Query: 70 PDIIDPAILRPGRLDQLIYIPLP 92
PDIIDPAILRPGRLD+ +++ LP
Sbjct: 727 PDIIDPAILRPGRLDKTLFVGLP 749
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGM---GAKKNVFIIGA 66
A + APC++F DE+D+I R + D R++ Q+LT MD + A V +IGA
Sbjct: 353 AVSNAPCIIFIDEIDAITPKREVASKD---MERRIVAQLLTCMDDLNNVAATARVLVIGA 409
Query: 67 TNRPDIIDPAILRPGRLDQLIYIPLPDE 94
TNRPD +DPA+ R GR D+ I + +PDE
Sbjct: 410 TNRPDSLDPALRRAGRFDREICLGIPDE 437
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGM-GAKKN---VFIIG 65
AR A PCV+FFDELDS+A RG GD GG DR+++Q+L E+DGM G ++N VF+IG
Sbjct: 1118 ARDARPCVVFFDELDSVAPKRGNQ-GDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIG 1176
Query: 66 ATNRPDIIDPAILRPGRLDQLIYIPLPD 93
ATNRPD++D A+LRPGR D+++Y+ + D
Sbjct: 1177 ATNRPDLLDTALLRPGRFDKMLYLGVSD 1204
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKNVFIIGATNR 69
ARA++PCV+FFDELD++ R S+ + A+ RV+N +LTE+DG+ + V++I ATNR
Sbjct: 581 ARASSPCVIFFDELDAMVPRRDDSLSE---ASSRVVNTLLTELDGLSDRSGVYVIAATNR 637
Query: 70 PDIIDPAILRPGRLDQLIYIPLPD 93
PDIIDPA+LRPGRLD+ + + LPD
Sbjct: 638 PDIIDPAMLRPGRLDKTLLVDLPD 661
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 10 ARAAAPCVLFFDELDSIAKSRGGSVGDGGGAADRVINQILTEMDGMGAKKN----VFIIG 65
A++ APC++F DE+D++ R + + R++ Q LT MD + +K V +IG
Sbjct: 263 AKSLAPCLMFIDEIDAVTPKRESAQRE---MERRIVAQFLTCMDELSFEKTDGKPVLVIG 319
Query: 66 ATNRPDIIDPAILRPGRLDQLIYIPLPDE 94
ATNRPD +D A+ R GR D+ I + +P +
Sbjct: 320 ATNRPDSLDSALRRAGRFDREICLTVPSQ 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.143 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,345,799
Number of Sequences: 539616
Number of extensions: 1751956
Number of successful extensions: 5747
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 4638
Number of HSP's gapped (non-prelim): 793
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)