BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13775
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35381|ATPA_DROME ATP synthase subunit alpha, mitochondrial OS=Drosophila
melanogaster GN=blw PE=1 SV=2
Length = 552
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 82/108 (75%), Gaps = 4/108 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL GQYVPMAIE+QVAVIYCGVRGHLDK+DPAKIT
Sbjct: 445 FAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKIT 504
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFTG 119
FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V F++ F G
Sbjct: 505 KFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQG 552
>sp|Q9XXK1|ATPA_CAEEL ATP synthase subunit alpha, mitochondrial OS=Caenorhabditis elegans
GN=H28O16.1 PE=1 SV=1
Length = 538
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL GQYVPM IEEQV VIY GV+G+LDK+DP+ IT
Sbjct: 431 FAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAIT 490
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FEKEFLAH++SS++ LL++I++EG+I+ TDA+LK VV NFLA F
Sbjct: 491 KFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536
>sp|P19483|ATPA_BOVIN ATP synthase subunit alpha, mitochondrial OS=Bos taurus GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 506 KFENAFLSHVISQHQALLSKIRTDGKISEESDAKLKEIVTNFLAGF 551
>sp|A5A6H5|ATPA_PANTR ATP synthase subunit alpha, mitochondrial OS=Pan troglodytes
GN=ATP5A1 PE=2 SV=1
Length = 553
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 KFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>sp|P25705|ATPA_HUMAN ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 KFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>sp|Q5R546|ATPA_PONAB ATP synthase subunit alpha, mitochondrial OS=Pongo abelii GN=ATP5A1
PE=2 SV=1
Length = 553
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 KFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551
>sp|P08428|ATPA_XENLA ATP synthase subunit alpha, mitochondrial OS=Xenopus laevis
GN=atp5a PE=2 SV=1
Length = 545
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL GQYVPMAIEEQV VIY GVRGHLDK++P+KIT
Sbjct: 438 FAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGVRGHLDKMEPSKIT 497
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FLAH+KS + LL +I+ +GKI+E DAKLK +V NFL+ F
Sbjct: 498 KFESAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLNFLSTF 543
>sp|P15999|ATPA_RAT ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus
GN=Atp5a1 PE=1 SV=2
Length = 553
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 KFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551
>sp|Q03265|ATPA_MOUSE ATP synthase subunit alpha, mitochondrial OS=Mus musculus GN=Atp5a1
PE=1 SV=1
Length = 553
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +LSR RL LL GQY PMAIEEQVAVIY GVRG+LDKL+P+KIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE FL+H+ S + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 KFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551
>sp|A7HT50|ATPA_PARL1 ATP synthase subunit alpha OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpA PE=3 SV=1
Length = 509
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL GQ+ P+ +EEQV VIY GV G+LDKL A +
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQGQFSPLKVEEQVVVIYAGVNGYLDKLPVADVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
+E++ L +I+SS G+L++I+ E +I+ DT+AKLK+ V NF F
Sbjct: 463 RYEQDLLRNIRSSHPGILDAIRSEKQISADTEAKLKSAVENFSKAFA 509
>sp|P24487|ATPA_SCHPO ATP synthase subunit alpha, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=atp1 PE=3 SV=1
Length = 536
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 58/77 (75%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY P+A+EEQV +IYCGV+G+LDK+ ++ FE +F+ +++SS ++E+I+KEG +++
Sbjct: 460 QYSPLAVEEQVPLIYCGVKGYLDKIPVDRVVEFEHKFIPYLRSSGAEIMEAIRKEGVLSK 519
Query: 101 DTDAKLKTVVTNFLANF 117
T+ LK V+ FL++F
Sbjct: 520 TTEDSLKAVIKEFLSSF 536
>sp|P37211|ATPA_NEUCR ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-1 PE=3 SV=1
Length = 551
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY PMA+ E V +I+ GV G LD + AKI +E +FLAH+K++E ++ +I KEG I++
Sbjct: 473 QYSPMAVNEMVPLIFAGVNGFLDSVPVAKILQWEADFLAHLKTNEPEIMATIDKEGAISK 532
Query: 101 DTDAKLKTVVTNFLANFTG 119
D +AKL+ V+ F +F G
Sbjct: 533 DLEAKLRDVIQTFTKSFLG 551
>sp|Q8UC74|ATPA_AGRT5 ATP synthase subunit alpha OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpA PE=3 SV=1
Length = 509
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL Q + P+ EEQVAVI+ GV G+LDK+ A++
Sbjct: 403 FAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKIPVAQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ FL++++S + +L++I+ E I++DT KLK + NF +F+
Sbjct: 463 KFEQGFLSYLRSEGKAILDTIRTEKAISDDTKGKLKGALDNFAKSFS 509
>sp|P07251|ATPA_YEAST ATP synthase subunit alpha, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP1 PE=1
SV=5
Length = 545
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 27 KSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84
++L+ RL LL QY P+A EEQV +IY GV GHLD ++ ++I FE FL+++KS+
Sbjct: 453 QTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGVNGHLDGIELSRIGEFESSFLSYLKSN 512
Query: 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
LL I+++G+++++ A LK+ +F+A F
Sbjct: 513 HNELLTEIREKGELSKELLASLKSATESFVATF 545
>sp|C3M9S3|ATPA_RHISN ATP synthase subunit alpha OS=Rhizobium sp. (strain NGR234) GN=atpA
PE=3 SV=1
Length = 509
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVI+ GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ L++++S + +L++I+ E I++DT AKLKT + +F +F
Sbjct: 463 KFEQGLLSYLRSEGKAVLDTIRTEKAISDDTKAKLKTAIDSFSKSFA 509
>sp|B0T338|ATPA_CAUSK ATP synthase subunit alpha OS=Caulobacter sp. (strain K31) GN=atpA
PE=3 SV=1
Length = 510
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL Q Y P A+EEQV VIY G RG+LD + + +
Sbjct: 404 FAKFGSDLDASTQKLLARGERLTELLKQPQYAPQAVEEQVCVIYAGTRGYLDNIPTSSVR 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE E LA + S + LL++I+ + + +D + LK+V+ NF A F
Sbjct: 464 RFESELLARLHSQHKDLLDNIRTKKALDKDLENTLKSVLDNFSATFA 510
>sp|P49375|ATPA_KLULA ATP synthase subunit alpha, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP1 PE=1 SV=1
Length = 548
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 27 KSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84
++L RL LL QY P+A EEQV +IY GV G+LD +D ++I FE +FLA++K++
Sbjct: 456 QTLARGERLTQLLKQNQYSPLAAEEQVPLIYAGVNGYLDNIDISRIAEFETKFLAYLKAN 515
Query: 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
++ +I+++G+++++ A LK+ +F+A F
Sbjct: 516 HDEIVSAIREKGELSKELLATLKSATESFVATF 548
>sp|A6UDM3|ATPA_SINMW ATP synthase subunit alpha OS=Sinorhizobium medicae (strain WSM419)
GN=atpA PE=3 SV=1
Length = 509
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVI+ GV G LDKL A +
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGFLDKLPVADVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ L++++S + +L++I+ E I++DT AKLK + +F +F
Sbjct: 463 KFEQGLLSYMRSEGKAVLDTIRTEKAISDDTKAKLKAAIDSFAKSFA 509
>sp|Q0AKV8|ATPA_MARMM ATP synthase subunit alpha OS=Maricaulis maris (strain MCS10)
GN=atpA PE=3 SV=1
Length = 510
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+++EEQV VIY G RG+LDKL + +
Sbjct: 404 FAQFGSDLDAATQKLLNRGQRLTELLKQPQFSPLSMEEQVCVIYAGTRGYLDKLPTSDVQ 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
+E + L H+ LL SI+ E K+T+D++++LK + F +F
Sbjct: 464 RYEADLLRHLHGEHAALLASIRTEKKLTDDSESQLKAALAKFTEHFA 510
>sp|B5ZSN9|ATPA_RHILW ATP synthase subunit alpha OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpA PE=3 SV=1
Length = 509
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
Q+ P+ EEQVAVI+ GV G+LDKL A + FE+ FL++++S +L++I+ E I++
Sbjct: 432 QFSPLKTEEQVAVIFAGVNGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISD 491
Query: 101 DTDAKLKTVVTNFLANFT 118
DT KL + +F +F+
Sbjct: 492 DTKGKLTAALDSFAKSFS 509
>sp|A6QB61|ATPA_SULNB ATP synthase subunit alpha OS=Sulfurovum sp. (strain NBC37-1)
GN=atpA PE=3 SV=1
Length = 504
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%)
Query: 40 GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT 99
G YVP+ +E+QV +I+ G G+LD + + +T FE E + +++ +L++I+ E KI+
Sbjct: 425 GPYVPVPVEKQVVIIFAGANGYLDDIAASSVTKFEAELMPFMEAKYASVLDAIRNEKKIS 484
Query: 100 EDTDAKLKTVVTNFLANFTG 119
+DTDA+L+ + +F +F G
Sbjct: 485 DDTDAQLRKAIEDFKTSFAG 504
>sp|Q2J3I2|ATPA_RHOP2 ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain
HaA2) GN=atpA PE=3 SV=1
Length = 510
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL Q + P+ +EEQV VIY GV G+LD L AK+
Sbjct: 404 FAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDALPVAKVR 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE L+ ++ E G+L++I+ +++DT AKLK VV ++ F
Sbjct: 464 AFEDGLLSLLRGKEVGILDAIRTSRDLSDDTAAKLKAVVESYAKTFA 510
>sp|Q1MAZ0|ATPA_RHIL3 ATP synthase subunit alpha OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpA PE=3 SV=1
Length = 509
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
Q+ P+ EEQVAVI+ GV G+LDKL A + FE+ FL++++S +L++I+ E I++
Sbjct: 432 QFSPLKTEEQVAVIFAGVNGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISD 491
Query: 101 DTDAKLKTVVTNFLANFT 118
DT KL + +F +F+
Sbjct: 492 DTRGKLTAALDSFAKSFS 509
>sp|Q92LK6|ATPA_RHIME ATP synthase subunit alpha OS=Rhizobium meliloti (strain 1021)
GN=atpA PE=3 SV=1
Length = 509
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVI+ GV G+LDKL + +
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVSDVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE L++++S + +L++I+ E I++DT AKLK + +F +F
Sbjct: 463 KFEHGLLSYLRSEGKAVLDTIRTEKAISDDTKAKLKGAIDSFAKSFA 509
>sp|Q9A2V7|ATPA_CAUCR ATP synthase subunit alpha OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=atpA PE=3 SV=1
Length = 510
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + ML+R RL LL Q Y P+++EEQV VIY G RG+LD + + +
Sbjct: 404 FAKFGSDLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVR 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE EFLA + S LLE I+ + + +D + LK+ + +F + F
Sbjct: 464 RFEAEFLARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSSTFA 510
>sp|B8H5I2|ATPA_CAUCN ATP synthase subunit alpha OS=Caulobacter crescentus (strain NA1000
/ CB15N) GN=atpA PE=3 SV=1
Length = 510
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + ML+R RL LL Q Y P+++EEQV VIY G RG+LD + + +
Sbjct: 404 FAKFGSDLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVR 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE EFLA + S LLE I+ + + +D + LK+ + +F + F
Sbjct: 464 RFEAEFLARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSSTFA 510
>sp|Q0BQE6|ATPA_GRABC ATP synthase subunit alpha OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=atpA PE=3 SV=1
Length = 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL Q+ P +E QVAVI+ GV+G+LD + K+
Sbjct: 404 FAQFASDLDASTQKLLARGARLTELLKQPQFTPYPVELQVAVIFAGVKGYLDAIPTDKVV 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ +A ++ +++ +L++I+ + ++ +T+AKL++ + F+ NFT
Sbjct: 464 EFERRLVAELRGAQKDILDAIRNDREVKSETEAKLRSFLEGFVKNFT 510
>sp|Q8FYR3|ATPA_BRUSU ATP synthase subunit alpha OS=Brucella suis biovar 1 (strain 1330)
GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509
>sp|A5VSE3|ATPA_BRUO2 ATP synthase subunit alpha OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509
>sp|A9WWS4|ATPA_BRUSI ATP synthase subunit alpha OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509
>sp|A9M839|ATPA_BRUC2 ATP synthase subunit alpha OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509
>sp|Q57B86|ATPA_BRUAB ATP synthase subunit alpha OS=Brucella abortus biovar 1 (strain
9-941) GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFV 509
>sp|Q2YLI5|ATPA_BRUA2 ATP synthase subunit alpha OS=Brucella abortus (strain 2308)
GN=atpA PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFV 509
>sp|B2S7M5|ATPA_BRUA1 ATP synthase subunit alpha OS=Brucella abortus (strain S19) GN=atpA
PE=3 SV=1
Length = 509
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVIY GV G+LDKL ++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGVNGYLDKLAVNQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
FE+ LA +++ + +LE I+ E +T+D AKLK + F +F
Sbjct: 463 KFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFV 509
>sp|Q13DP4|ATPA_RHOPS ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain
BisB5) GN=atpA PE=3 SV=1
Length = 510
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + + +L+R RL LL Q + P+ +EEQV VIY GV G+LD L AK+
Sbjct: 404 FAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDALPVAKVR 463
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 118
+FE L+ ++ E +L++I+ +++DT AKLK V+ ++ F
Sbjct: 464 SFEDGLLSLLRGKESAILDAIRTSRDLSDDTAAKLKAVIESYAKTFA 510
>sp|A1BJF5|ATPA_CHLPD ATP synthase subunit alpha OS=Chlorobium phaeobacteroides (strain
DSM 266) GN=atpA PE=3 SV=1
Length = 526
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 40 GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT 99
GQY+PMA+E+QVA+I+ G +G LD +D +I FE+EFL ++ +L++I + G +
Sbjct: 443 GQYIPMAVEKQVAIIFLGTQGLLDAVDVTRIRKFEEEFLGLLEHKHPEVLKAIAETGTLE 502
Query: 100 EDTDAKLKTVVTNFLANF 117
DT K+K F+A+F
Sbjct: 503 TDTANKIKEAAQKFIASF 520
>sp|A4T8K0|ATPA_MYCGI ATP synthase subunit alpha OS=Mycobacterium gilvum (strain PYR-GCK)
GN=atpA PE=3 SV=1
Length = 548
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY P ++E+QV I+ G +GHLD + ++ FE+E L H+K+S +L+ I++ K++E
Sbjct: 435 QYTPYSVEDQVVAIFLGTKGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETKKLSE 494
Query: 101 DTDAKLKTVVTNFLANFT 118
T+ KL V+ +F F+
Sbjct: 495 STEEKLTNVINDFKKGFS 512
>sp|B3EL39|ATPA_CHLPB ATP synthase subunit alpha OS=Chlorobium phaeobacteroides (strain
BS1) GN=atpA PE=3 SV=1
Length = 526
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QYVPMA+E+QVA+I+ G +G LD+LD I FE+EFL+ ++ +L SI + G++
Sbjct: 444 QYVPMAVEKQVAIIFAGTQGVLDQLDLQYIRRFEEEFLSLLEHKHSDILNSIAETGQMDV 503
Query: 101 DTDAKLKTVVTNFLANF 117
D +LK V F++ F
Sbjct: 504 DVAKRLKEVAEQFMSTF 520
>sp|Q2K3G8|ATPA_RHIEC ATP synthase subunit alpha OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpA PE=3 SV=1
Length = 509
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + +L+R RL LL Q + P+ EEQVAVI+ GV G+LDKL A++
Sbjct: 403 FAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVAQVG 462
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE+ L++++S +L++I+ E I++DT KL + +F +F
Sbjct: 463 KFEQGLLSYLRSEGSAILDAIRTEKAISDDTKGKLTAALDSFAKSF 508
>sp|B9K7T9|ATPA_THENN ATP synthase subunit alpha OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=atpA PE=3 SV=1
Length = 503
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY PM +EEQV VI+ GVRG+LD L + FEKEFL + + +L+ I+++ ++T
Sbjct: 425 QYSPMPVEEQVVVIFAGVRGYLDDLPVEAVRRFEKEFLRFMHEKHQDILDDIREKKELTP 484
Query: 101 DTDAKLKTVVTNFLANF 117
+T+ KLK + F A F
Sbjct: 485 ETEEKLKKAIEEFKAVF 501
>sp|B1I6J9|ATPA_DESAP ATP synthase subunit alpha OS=Desulforudis audaxviator (strain
MP104C) GN=atpA PE=3 SV=1
Length = 507
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 40 GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT 99
GQY PM +EEQV IY GVRG+LD L K+ FE EFL ++++ + + E IK KIT
Sbjct: 423 GQYNPMPLEEQVMSIYTGVRGYLDSLPADKVRDFEIEFLKYMRTEKPEIGEDIKVNQKIT 482
Query: 100 EDTDAKLKTVVTNFLANFT 118
+ ++KLK V F F
Sbjct: 483 PENESKLKAAVEEFKQMFV 501
>sp|A8GY42|ATPA_RICB8 ATP synthase subunit alpha OS=Rickettsia bellii (strain OSU 85-389)
GN=atpA PE=3 SV=1
Length = 512
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 40 GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT 99
QY P ++EEQ+ IY G + +L + +I FE++ L+ IK +++ +LESIK E +IT
Sbjct: 431 AQYHPFSVEEQIISIYAGTKKYLINIPVERIKEFEEKMLSEIKQNQKDILESIKSEKRIT 490
Query: 100 EDTDAKLKTVVTNFLANFT 118
E+ + KLKT + NF+ +F
Sbjct: 491 EENEQKLKTFLENFVKDFV 509
>sp|Q3AUA7|ATPA_CHLCH ATP synthase subunit alpha OS=Chlorobium chlorochromatii (strain
CaD3) GN=atpA PE=3 SV=1
Length = 526
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 40 GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT 99
GQYVPM +E+QVA+I+ G +G LD +D I E+EFLA ++ +L I ++G +
Sbjct: 443 GQYVPMPVEKQVAIIFVGTQGLLDSVDLKFIRKCEEEFLAMLEMKHADILSGIAEKGTLE 502
Query: 100 EDTDAKLKTVVTNFLANF 117
D +KLK + T F+A F
Sbjct: 503 ADVASKLKDIATKFIATF 520
>sp|B8CZ12|ATPA_HALOH ATP synthase subunit alpha OS=Halothermothrix orenii (strain H 168
/ OCM 544 / DSM 9562) GN=atpA PE=3 SV=1
Length = 541
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY PM +E+QV +IY V GHLD + I FE EFL++I S+ + E+IKK G + +
Sbjct: 425 QYTPMDMEDQVMIIYTVVNGHLDDIPVDNIERFEDEFLSYIHSNYPEIPETIKKTGDLDD 484
Query: 101 DTDAKLKTVVTNFLANFT 118
+T+ KL V+ F NF
Sbjct: 485 ETEEKLTGVIKEFKENFN 502
>sp|B2HQK4|ATPA_MYCMM ATP synthase subunit alpha OS=Mycobacterium marinum (strain ATCC
BAA-535 / M) GN=atpA PE=3 SV=1
Length = 549
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + L R RL LL Q Y PM +EEQV I+ G GHLD + +
Sbjct: 406 FAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGTGGHLDSVPVEDVR 465
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE E L HI++SE LL +I+ K+TE+T+ L V+ +F F
Sbjct: 466 RFETELLDHIRASEENLLSTIRDTQKLTEETEEALTKVINHFKKGF 511
>sp|A0PUK2|ATPA_MYCUA ATP synthase subunit alpha OS=Mycobacterium ulcerans (strain Agy99)
GN=atpA PE=3 SV=1
Length = 549
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 16 YSNFTARIGLNKSLMLSR--RLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
++ F + + L R RL LL Q Y PM +EEQV I+ G GHLD + +
Sbjct: 406 FAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGTGGHLDSVPVEDVR 465
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 117
FE E L HI++SE LL +I+ K+TE+T+ L V+ +F F
Sbjct: 466 RFETELLDHIRASEENLLSTIRDTQKLTEETEEALTKVINHFKKGF 511
>sp|A8F3K0|ATPA_THELT ATP synthase subunit alpha OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=atpA PE=3 SV=1
Length = 503
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY P+ +EEQV V+Y GVRG+LD+L + FEKEFL ++++S+ LL+ I ++ ++T+
Sbjct: 425 QYSPLPVEEQVVVLYAGVRGYLDELPVESVRKFEKEFLDYMRTSKSSLLKLISEKKELTQ 484
Query: 101 DTDAKLKTVVTNFLANF 117
+ + +LK + FL +
Sbjct: 485 EVEDELKKSIQEFLEGW 501
>sp|A9H9A4|ATPA_GLUDA ATP synthase subunit alpha OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=atpA PE=3 SV=1
Length = 513
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 16 YSNFTARI--GLNKSLMLSRRLPILLGQ--YVPMAIEEQVAVIYCGVRGHLDKLDPAKIT 71
+S F + + K L RL LL Q P+A+EEQV V++ G RG +D + K++
Sbjct: 406 FSQFASDLDPATQKQLARGARLVELLKQPETSPLAVEEQVCVLFAGTRGFIDAVPVDKVS 465
Query: 72 TFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFTG 119
++E++ LA + + + +LESI+ E +IT+D + +L +T+F F G
Sbjct: 466 SYERQLLAELHTGGKEILESIRTERQITKDNETRLTDFLTSFGRQFAG 513
>sp|B1LBC1|ATPA_THESQ ATP synthase subunit alpha OS=Thermotoga sp. (strain RQ2) GN=atpA
PE=3 SV=1
Length = 503
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY PM +EEQV V++ GVRG+LD L ++ FEKEFL + + +L+ IK + ++T
Sbjct: 425 QYSPMPVEEQVVVLFAGVRGYLDDLPVEEVRRFEKEFLRFMHEKHQDILDDIKTKKELTS 484
Query: 101 DTDAKLKTVVTNFLANF 117
+T+ KLK + F F
Sbjct: 485 ETEEKLKKAIEEFKTTF 501
>sp|A5ILX0|ATPA_THEP1 ATP synthase subunit alpha OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=atpA PE=3 SV=1
Length = 503
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 41 QYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 100
QY PM +EEQV V++ GVRG+LD L ++ FEKEFL + + +L+ IK + ++T
Sbjct: 425 QYSPMPVEEQVVVLFAGVRGYLDDLPVEEVRRFEKEFLRFMHEKHQDILDDIKTKKELTS 484
Query: 101 DTDAKLKTVVTNFLANF 117
+T+ KLK + F F
Sbjct: 485 ETEEKLKKAIEEFKTTF 501
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,006,075
Number of Sequences: 539616
Number of extensions: 1495734
Number of successful extensions: 4774
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3896
Number of HSP's gapped (non-prelim): 887
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)