Query psy13775
Match_columns 119
No_of_seqs 112 out of 1025
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 20:11:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13775.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13775hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oaa_A ATP synthase subunit al 99.9 9.5E-22 3.3E-26 164.2 9.6 107 13-119 403-513 (513)
2 2ck3_A ATP synthase subunit al 99.8 2.2E-19 7.5E-24 150.1 11.6 106 13-118 400-509 (510)
3 2r9v_A ATP synthase subunit al 99.8 3E-19 1E-23 149.3 11.5 105 14-118 406-514 (515)
4 1fx0_A ATP synthase alpha chai 99.8 3.4E-19 1.1E-23 148.9 11.2 106 13-118 393-502 (507)
5 2qe7_A ATP synthase subunit al 99.7 1.8E-18 6.1E-23 144.4 4.7 104 13-118 392-499 (502)
6 2c61_A A-type ATP synthase non 97.3 8.9E-05 3.1E-09 61.5 2.2 65 14-82 391-462 (469)
7 3vr4_D V-type sodium ATPase su 96.4 0.001 3.6E-08 55.1 2.0 63 15-81 391-460 (465)
8 2obl_A ESCN; ATPase, hydrolase 94.1 0.049 1.7E-06 42.9 4.3 45 13-57 294-345 (347)
9 3gqb_B V-type ATP synthase bet 92.7 0.035 1.2E-06 45.9 1.4 60 15-79 394-460 (464)
10 2dpy_A FLII, flagellum-specifi 90.8 0.19 6.4E-06 40.8 3.6 46 13-58 383-435 (438)
11 2ck3_D ATP synthase subunit be 90.3 0.32 1.1E-05 40.4 4.7 56 13-68 389-459 (482)
12 1sky_E F1-ATPase, F1-ATP synth 89.8 0.42 1.4E-05 39.5 5.0 58 12-69 380-452 (473)
13 1fx0_B ATP synthase beta chain 86.5 0.52 1.8E-05 39.3 3.5 57 13-69 402-473 (498)
14 3vr4_A V-type sodium ATPase ca 84.8 0.75 2.6E-05 39.2 3.8 64 19-82 484-564 (600)
15 3mfy_A V-type ATP synthase alp 83.8 1.5 5.1E-05 37.3 5.2 62 19-82 479-557 (588)
16 1h3o_B Transcription initiatio 78.3 2.9 0.0001 26.2 3.9 31 86-116 12-42 (76)
17 1spg_A Hemoglobin; carbon mono 77.3 9.5 0.00033 25.6 6.7 90 12-114 40-136 (144)
18 2zs0_C Extracellular giant hem 76.1 13 0.00045 24.8 7.2 92 12-114 46-143 (147)
19 1yhu_B Giant hemoglobins B cha 73.6 17 0.00057 24.0 7.4 91 12-113 44-141 (144)
20 2zs0_A Extracellular giant hem 72.3 18 0.00062 23.9 7.2 90 12-113 42-137 (140)
21 2zs0_D Extracellular giant hem 71.1 15 0.00052 24.8 6.5 92 12-114 46-141 (145)
22 2zs0_B Extracellular giant hem 69.8 21 0.00072 23.6 7.0 91 12-113 42-139 (142)
23 1cg5_B Protein (hemoglobin); o 69.7 9.7 0.00033 25.7 5.2 88 12-113 38-132 (141)
24 1sct_B Hemoglobin II (carbonmo 66.6 12 0.00041 25.1 5.2 93 12-114 49-148 (151)
25 1yhu_D Hemoglobin B2 chain; gl 64.8 27 0.00091 23.3 6.7 91 12-113 46-142 (149)
26 1x9f_D Globin C, hemoglobin ch 64.5 27 0.00093 22.9 6.8 90 12-112 42-137 (140)
27 1out_A Hemoglobin I; heme, oxy 63.0 26 0.00088 23.4 6.3 90 12-114 40-135 (143)
28 2nrl_A Myoglobin; transport pr 61.6 24 0.00081 23.6 5.9 87 12-113 36-132 (147)
29 3d1k_A Hemoglobin subunit alph 61.4 32 0.0011 22.7 7.0 90 12-114 39-134 (142)
30 1xq5_A Hemoglobin alpha-1 chai 60.7 27 0.00091 23.2 6.1 89 12-113 40-134 (143)
31 3bom_A Hemoglobin subunit alph 60.1 33 0.0011 22.7 6.4 90 12-114 40-135 (143)
32 1x9f_B Erythrocruorin, globin 60.1 34 0.0012 22.6 8.2 92 12-114 44-141 (145)
33 1cg5_A Protein (hemoglobin); o 59.6 34 0.0012 22.6 6.4 89 12-114 39-133 (141)
34 1lhs_A Myoglobin; oxygen stora 58.6 38 0.0013 22.7 6.9 89 12-113 39-138 (153)
35 3gqb_A V-type ATP synthase alp 58.3 27 0.00092 29.6 6.8 54 19-72 471-541 (578)
36 1x46_A Globin chain, hemoglobi 57.9 25 0.00085 23.3 5.5 93 12-115 40-144 (150)
37 1eca_A Erythrocruorin (AQUO Me 57.7 24 0.00082 23.3 5.4 69 12-84 34-111 (136)
38 1v4x_B Hemoglobin beta chain; 55.4 43 0.0015 22.3 6.8 90 12-114 38-138 (146)
39 1h97_A Globin-3; HET: HEM; 1.1 55.2 44 0.0015 22.3 8.0 89 12-113 42-139 (147)
40 1hlb_A Hemoglobin (deoxy); oxy 55.2 42 0.0014 22.4 6.4 93 12-115 50-151 (158)
41 1yhu_C Hemoglobin B1A chain; g 54.9 39 0.0013 22.4 6.1 91 12-113 47-143 (148)
42 1out_B Hemoglobin I; heme, oxy 54.1 45 0.0016 22.2 6.8 90 12-114 38-138 (146)
43 1jeb_A Hemoglobin zeta chain; 52.9 37 0.0013 22.3 5.7 89 12-113 40-133 (142)
44 3pt8_A Hemoglobin II; oxygen c 52.6 48 0.0016 21.9 7.2 88 12-112 41-139 (152)
45 2w72_C Human hemoglobin A; iro 52.5 38 0.0013 22.2 5.7 90 12-114 39-133 (141)
46 1sct_A Hemoglobin II (carbonmo 51.9 31 0.0011 23.0 5.2 91 12-113 48-146 (150)
47 1yhu_A Hemoglobin A1 chain; gl 51.0 51 0.0017 21.8 8.1 92 12-113 42-138 (145)
48 2aa1_B Hemoglobin beta-C chain 49.3 55 0.0019 21.7 7.0 90 12-114 38-138 (146)
49 1x9f_C Erythrocruorin, globin 48.9 56 0.0019 21.7 6.8 92 12-114 50-147 (153)
50 2vyw_A Hemoglobin; trematode, 48.5 55 0.0019 21.8 6.1 90 12-114 43-141 (148)
51 1x9f_A Globin IV, extracellula 48.0 59 0.002 21.7 6.6 92 12-114 49-146 (151)
52 1ghh_A DINI, DNA-damage-induci 47.1 7.9 0.00027 24.5 1.4 53 63-116 11-73 (81)
53 4hrt_B Hemoglobin B chain; oxy 46.9 38 0.0013 22.6 5.1 92 12-113 50-148 (152)
54 3d1k_B Hemoglobin subunit beta 45.4 58 0.002 21.6 5.8 89 12-113 38-137 (146)
55 1wmu_A Hemoglobin D alpha chai 44.5 56 0.0019 21.4 5.6 90 12-114 39-133 (141)
56 2r80_B Hemoglobin subunit beta 44.1 66 0.0023 21.2 5.9 90 12-114 38-138 (146)
57 2c0k_A Hemoglobin; oxygen tran 44.0 68 0.0023 21.2 7.7 90 12-114 38-140 (151)
58 2r80_A Hemoglobin subunit alph 43.2 58 0.002 21.4 5.5 88 12-114 39-133 (141)
59 3g46_A Globin-1; oxygen transp 43.0 61 0.0021 21.4 5.6 88 13-113 48-142 (146)
60 1mba_A Myoglobin; oxygen stora 42.9 42 0.0014 22.1 4.7 86 12-113 40-138 (147)
61 2dc3_A Cytoglobin; myoglobin, 41.9 78 0.0027 22.1 6.2 92 12-112 59-160 (193)
62 1gcv_B Hemoglobin; oxygen stor 41.4 64 0.0022 21.3 5.5 85 12-113 38-127 (136)
63 4b4y_A Neuroglobin; transport 41.2 44 0.0015 22.3 4.7 91 13-113 47-148 (154)
64 3mkb_A Hemoglobin subunit alph 40.9 35 0.0012 22.8 4.1 90 13-114 40-132 (140)
65 1hlm_A Hemoglobin (cyano Met); 39.9 31 0.0011 23.0 3.7 93 12-115 50-151 (159)
66 3pt8_B Hemoglobin III; oxygen 39.7 79 0.0027 20.8 7.3 90 12-113 41-140 (152)
67 2bf9_A Pancreatic hormone; tur 38.7 36 0.0012 18.3 3.0 20 63-82 10-29 (36)
68 1a6m_A Myoglobin; heme protein 38.2 79 0.0027 20.9 5.6 89 12-113 39-138 (151)
69 3lb2_A Dehaloperoxidase A; glo 37.3 89 0.0031 20.7 6.7 90 12-113 31-130 (137)
70 1n6j_G Calcineurin-binding pro 37.2 19 0.00064 18.9 1.7 19 93-111 4-22 (35)
71 1bba_A Bovine pancreatic polyp 37.1 36 0.0012 18.3 2.9 20 63-82 10-29 (36)
72 3bom_B Hemoglobin subunit beta 37.1 66 0.0023 21.3 5.0 89 12-113 38-138 (147)
73 2bk9_A CG9734-PA; oxygen trans 36.4 90 0.0031 20.6 5.6 89 12-114 38-139 (153)
74 2w72_B Human hemoglobin A; iro 35.7 93 0.0032 20.4 6.0 93 12-114 38-138 (146)
75 1b0b_A Hemoglobin; hemoprotein 35.4 82 0.0028 20.5 5.2 72 13-86 40-122 (142)
76 3mkb_B Hemoglobin subunit beta 34.7 47 0.0016 22.1 3.9 84 13-113 39-127 (136)
77 1c7c_A Protein (deoxyhemoglobi 33.4 91 0.0031 23.0 5.7 88 12-114 181-275 (283)
78 1it2_A Hemoglobin; hagfish, de 33.1 98 0.0033 20.4 5.4 71 12-86 48-130 (146)
79 3bzc_A TEX; helix-turn-helix, 30.8 51 0.0018 28.8 4.3 49 60-109 50-98 (785)
80 1f8p_A Neuropeptide Y (PNPY); 30.8 48 0.0017 17.9 2.7 20 63-82 10-29 (37)
81 1ois_A DNA topoisomerase I; DN 29.0 1.8E+02 0.0061 21.6 8.1 77 40-117 17-130 (223)
82 4hrt_A Globin-2 A chain; oxyge 28.7 1.3E+02 0.0044 19.9 5.8 91 12-113 48-146 (150)
83 2oif_A Horvu GLB1, non-legume 28.3 1.3E+02 0.0044 19.8 5.9 90 12-114 47-151 (162)
84 3vi8_A Peroxisome proliferator 25.7 52 0.0018 24.4 3.1 39 15-57 77-117 (273)
85 1j0g_A Hypothetical protein 18 24.4 18 0.00063 23.1 0.3 14 10-23 68-81 (92)
86 1w1n_A Phosphatidylinositol 3- 23.9 27 0.00094 18.1 0.9 12 43-54 1-12 (33)
87 2l60_A Peptide YY; GPCR ligand 23.8 88 0.003 17.2 3.0 20 63-82 14-33 (41)
88 1a31_A Protein (topoisomerase 23.5 2.4E+02 0.0082 23.9 7.0 77 40-117 55-164 (591)
89 2lhb_A Hemoglobin V (cyano Met 23.1 1.6E+02 0.0056 19.2 6.7 72 12-87 48-133 (149)
90 4h3z_A TRNA (guanine-N(1)-)-me 22.0 1.9E+02 0.0066 22.1 5.7 47 68-114 227-274 (276)
No 1
>3oaa_A ATP synthase subunit alpha; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1} PDB: 2a7u_A
Probab=99.86 E-value=9.5e-22 Score=164.20 Aligned_cols=107 Identities=27% Similarity=0.476 Sum_probs=101.7
Q ss_pred hhHHhhhcCCH--HHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHH
Q psy13775 13 GYHYSNFTARI--GLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGL 88 (119)
Q Consensus 13 ~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~ 88 (119)
-+.|++||+++ .++.+|+||+|++++| ++|+|+++++|+++||++++||||+||+++|.+|++++++|++++++++
T Consensus 403 l~~~~~~g~~ld~~~~~~l~~~~~i~~fL~Q~~~~~~~~~e~~~~l~a~~~g~ld~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (513)
T 3oaa_A 403 LAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPL 482 (513)
T ss_dssp HHHHHTTCCSCCHHHHHHHHHHHHHHHHTCCCSSCCCCTTHHHHHHHHHHSCTTTTTCCHHHHHHHHHHHHHHTGGGCHH
T ss_pred HHHHHHhhccCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcCCCccCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 46899999999 9999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcCC
Q psy13775 89 LESIKKEGKITEDTDAKLKTVVTNFLANFTG 119 (119)
Q Consensus 89 ~~~I~~~~~l~~~~~~~L~~~i~~~~~~f~~ 119 (119)
++.|..++++++++++.|++++++|++...|
T Consensus 483 ~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 513 (513)
T 3oaa_A 483 MQEINQTGGYNDEIEGKLKGILDSFKATQSW 513 (513)
T ss_dssp HHHHHHHCCCCHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999876543
No 2
>2ck3_A ATP synthase subunit alpha\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1bmf_A* 1e1q_A* 1e1r_A* 1e79_A* 1h8h_A* 1nbm_A* 1ohh_A* 1qo1_A 1w0j_A* 1w0k_A* 1h8e_A* 2jdi_A* 2wss_A* 2w6j_A 2w6e_A 2w6g_A 2w6f_A 2w6h_A 2w6i_A 1cow_A* ...
Probab=99.80 E-value=2.2e-19 Score=150.08 Aligned_cols=106 Identities=55% Similarity=0.850 Sum_probs=102.5
Q ss_pred hhHHhhhcCCH--HHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHH
Q psy13775 13 GYHYSNFTARI--GLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGL 88 (119)
Q Consensus 13 ~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~ 88 (119)
-+.|++||+|| .++.+|+||+|++++| ++|+|+|+++|+..||++.+|++|++|+++|.+|+..+++|++++++++
T Consensus 400 l~~~~~~G~~l~~~~~~~l~~~~~i~~fL~Q~~~~~~~~~~~~~~l~~~~~g~l~~i~~~~i~~~~~~~~~~~~~~~~~~ 479 (510)
T 2ck3_A 400 VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQAL 479 (510)
T ss_dssp HGGGSSSCSSSCHHHHHHHHHHHHHHHTTCCCSSCCCCHHHHHHHHHHHHTTSSTTSCGGGHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHhHHHHHHhcCCCCCCCCHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 35789999999 8999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcC
Q psy13775 89 LESIKKEGKITEDTDAKLKTVVTNFLANFT 118 (119)
Q Consensus 89 ~~~I~~~~~l~~~~~~~L~~~i~~~~~~f~ 118 (119)
++.|..++.+++++++.|++++++|++.|.
T Consensus 480 ~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 509 (510)
T 2ck3_A 480 LGKIRTDGKISEESDAKLKEIVTNFLAGFE 509 (510)
T ss_dssp HHHHHHSSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998875
No 3
>2r9v_A ATP synthase subunit alpha; TM1612, structural genomics, JOI for structural genomics, JCSG, protein structure initiative ATP synthesis; HET: ATP PG4; 2.10A {Thermotoga maritima MSB8}
Probab=99.80 E-value=3e-19 Score=149.35 Aligned_cols=105 Identities=35% Similarity=0.656 Sum_probs=101.9
Q ss_pred hHHhhhcCCH--HHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHHH
Q psy13775 14 YHYSNFTARI--GLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLL 89 (119)
Q Consensus 14 ~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~~ 89 (119)
+.|++||+|+ .++.+|++|+|++++| ++|+|+|+++|+..||++.+|++|++|+++|.+|+..+++|+++++++++
T Consensus 406 ~~~~~~G~~l~~~~~~~l~~~~~i~~fL~Q~~~~~~~~~e~~~~l~~~~~g~ld~i~~~~i~~~~~~~~~~~~~~~~~~~ 485 (515)
T 2r9v_A 406 ETFAQFATELDPATRAQIIRGQRLMELLKQEQYSPMPVEEQVVVLFAGVRGYLDDLPVEEVRRFEKEFLRFMHEKHQDIL 485 (515)
T ss_dssp HTTGGGCSCCCHHHHHHHHHHHHHHHHTCCCTTCCCCHHHHHHHHHHHHTTTTTTSCGGGHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHHHhhhHHHH
Confidence 5689999999 8999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHhcC
Q psy13775 90 ESIKKEGKITEDTDAKLKTVVTNFLANFT 118 (119)
Q Consensus 90 ~~I~~~~~l~~~~~~~L~~~i~~~~~~f~ 118 (119)
+.|..++.+++++++.|++++++|++.|.
T Consensus 486 ~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 514 (515)
T 2r9v_A 486 DDIKTKKELTSETEEKLKKAIEEFKTTFR 514 (515)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998874
No 4
>1fx0_A ATP synthase alpha chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_A*
Probab=99.79 E-value=3.4e-19 Score=148.88 Aligned_cols=106 Identities=27% Similarity=0.441 Sum_probs=101.7
Q ss_pred hhHHhhhcCCH--HHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHH
Q psy13775 13 GYHYSNFTARI--GLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGL 88 (119)
Q Consensus 13 ~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~ 88 (119)
-+.|++||+|+ .++.+|+||+|+++.| ++|+|+|+++|+..||++.+|++|++|+++|.+|++.+++|++.+++++
T Consensus 393 l~~~~~~G~~l~~~~~~~l~~~~~i~~fL~Q~~~~~~~~~e~~~~l~~~~~g~l~~i~~~~i~~~~~~~~~~~~~~~~~~ 472 (507)
T 1fx0_A 393 LEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVEEQVMTIYTGTNGYLDSLELDQVRKYLVELRTYVKTNKPEF 472 (507)
T ss_dssp HTTTGGGCSSCCHHHHHHHHHHHHHHHHHCCCTTCCCCHHHHHHHHHHHHTTSSSSSCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhhchhcCCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 35689999999 8999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcC
Q psy13775 89 LESIKKEGKITEDTDAKLKTVVTNFLANFT 118 (119)
Q Consensus 89 ~~~I~~~~~l~~~~~~~L~~~i~~~~~~f~ 118 (119)
++.|..++.+++++++.|++++++|++.|.
T Consensus 473 ~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 502 (507)
T 1fx0_A 473 QEIISSTKTFTEEAEALLKEAIQEQMERFL 502 (507)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999998873
No 5
>2qe7_A ATP synthase subunit alpha; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP} PDB: 1sky_B
Probab=99.72 E-value=1.8e-18 Score=144.36 Aligned_cols=104 Identities=25% Similarity=0.496 Sum_probs=99.0
Q ss_pred hhHHhhhcCCH--HHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHH
Q psy13775 13 GYHYSNFTARI--GLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGL 88 (119)
Q Consensus 13 ~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~ 88 (119)
-+.|++||+|| .++.+|+||+|+++.| ++|+|+|+++|+..||++.+|++|++|+++|.+|++.+++|++++++++
T Consensus 392 l~~~~~~G~~l~~~~~~~l~~~~~i~~fL~Q~~~~~~~~~~~~~~l~~~~~g~l~~i~~~~i~~~~~~~~~~~~~~~~~~ 471 (502)
T 2qe7_A 392 LQAFAQFGSDLDKATQAKLNRGERTVEILKQDEHKPMPVEEQVISIYAVTNGFMDDIPVEDVRRFEEELLSFMRANKDSL 471 (502)
T ss_dssp GGGSTTCCCCTTTTTTTTHHHHHHHHHHHCCCTTCCCCHHHHHHHHHHHHTTTTTSSCSTTHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 35689999999 8999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcC
Q psy13775 89 LESIKKEGKITEDTDAKLKTVVTNFLANFT 118 (119)
Q Consensus 89 ~~~I~~~~~l~~~~~~~L~~~i~~~~~~f~ 118 (119)
++.|..++.++++ +.|++++++|++.|.
T Consensus 472 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~ 499 (502)
T 2qe7_A 472 LDHIRQTGELPDT--KELDAAIEEFKKGFT 499 (502)
T ss_dssp HHHHHSSCCCCCT--THHHHHHHTTCSCSC
T ss_pred HHHHHhcCCCCHH--HHHHHHHHHHHHhhc
Confidence 9999999999999 999999999987663
No 6
>2c61_A A-type ATP synthase non-catalytic subunit B; hydrolase, H+ ATPase, A1AO, ATP synthesis, hydrogen ION transport, ION transport; 1.5A {Methanosarcina mazei GO1} PDB: 3dsr_A* 3b2q_A* 2rkw_A* 3eiu_A*
Probab=97.27 E-value=8.9e-05 Score=61.45 Aligned_cols=65 Identities=11% Similarity=0.185 Sum_probs=56.8
Q ss_pred hHHhhhc--CCH--HHHHHHhcccchhh-hc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 14 YHYSNFT--ARI--GLNKSLMLSRRLPI-LL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 14 ~~Fs~Fg--sdl--~tr~~L~rG~Rl~E-lL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
+.|.+|+ +++ .++..+++|+++.+ .| +.|.|.++++++..|++ +|+.+|.+.+..++.++++++.
T Consensus 391 ~~i~~~~G~~~l~d~~~~~l~~~~~i~~~fL~Q~~~~~~~~~et~~~l~~----~l~~~~~~~~~~~~~~~~~~~~ 462 (469)
T 2c61_A 391 RGLVAIVGKEALSERDTKFLEFADLFEDKFVRQGRNENRTIEDTLEIGWQ----ILTHLPENQLGRIDNKYIQKYH 462 (469)
T ss_dssp HHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTCCCTTCCCCHHHHHHHHHH----HHTTSCGGGCTTSCHHHHHHHS
T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH----HHHhCCHHHHHHHHHHHHHHHh
Confidence 3456665 344 88999999999998 99 88999999999999999 5799999999999999999885
No 7
>3vr4_D V-type sodium ATPase subunit D; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_D* 3vr2_D* 3vr5_D 3vr6_D*
Probab=96.45 E-value=0.001 Score=55.05 Aligned_cols=63 Identities=13% Similarity=0.143 Sum_probs=53.5
Q ss_pred HHhhhc-CCH---HHHHHHhcccch-hhhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 15 HYSNFT-ARI---GLNKSLMLSRRL-PILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 15 ~Fs~Fg-sdl---~tr~~L~rG~Rl-~ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
.+.+|+ +|. .++..+.+|+++ .+.| +.+.|.+.++++.+|+. +++.+|.+++.+|+.++++..
T Consensus 391 ~i~~~~G~d~L~~~d~~~~~~~~~~~~~fL~Q~~~e~~~~~~~~~~l~~----~l~~~p~~~~~~~~~~~~~~~ 460 (465)
T 3vr4_D 391 ELAVVLGESALSDIDKIYAKFAERFENEYVNQGFYTNRTITETLDLGWE----LLAMLPRTELKRIKDDLLDKY 460 (465)
T ss_dssp HHHHHHCTTSCCHHHHHHHHHHHHHHHHTTCCCTTCCCCHHHHHHHHHH----HHTTSCTTTCTTSCHHHHHHH
T ss_pred HHHhhcCCCCCCHHHHHHHHhhHHHHHHHhCCCCCCCCCHHHHHHHHHH----HHhhCCHHHHHHHHHHHHHHh
Confidence 455564 343 789999999998 6888 88999999999999988 788999999999999998754
No 8
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=94.12 E-value=0.049 Score=42.89 Aligned_cols=45 Identities=4% Similarity=-0.015 Sum_probs=39.5
Q ss_pred hhHHhhhcC-----CHHHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHH
Q psy13775 13 GYHYSNFTA-----RIGLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCG 57 (119)
Q Consensus 13 ~~~Fs~Fgs-----dl~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~ 57 (119)
.+.+.+||+ |..|+..+++|+++.+.| +.++|.|.++|+..|..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~Q~~~~~~~~~~~~~~~~~~ 345 (347)
T 2obl_A 294 PELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYEKTIESLFKV 345 (347)
T ss_dssp THHHHTTTCCCCCSCHHHHHHHHTHHHHHHHHCCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCcCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 567888877 448899999999999999 999999999999988765
No 9
>3gqb_B V-type ATP synthase beta chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION TRA hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_D* 3a5d_D 3j0j_D*
Probab=92.75 E-value=0.035 Score=45.93 Aligned_cols=60 Identities=13% Similarity=0.282 Sum_probs=48.0
Q ss_pred HHhhhc-CC-H--HHHHHHhcccchh-hhc--CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHH
Q psy13775 15 HYSNFT-AR-I--GLNKSLMLSRRLP-ILL--GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLA 79 (119)
Q Consensus 15 ~Fs~Fg-sd-l--~tr~~L~rG~Rl~-ElL--~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~ 79 (119)
.+.+|+ +| + .++..+.+|+++. +.| + ++|.+.++++.+++.. +..+|.+++.++..++++
T Consensus 394 ~i~~~~G~d~L~~~d~~~~~~~~~~~~~fL~Q~-~e~~~~~~s~~~l~~l----l~~~p~~~~~~~~~~~~~ 460 (464)
T 3gqb_B 394 KLVAIIGEDALTENDRRYLQFADAFERFFINQG-QQNRSIEESLQIAWAL----LSMLPQGELKRISKDHIG 460 (464)
T ss_dssp HHTSSSCSCCCCSHHHHTTHHHHHHHHTTTCCT-TCCCCHHHHHHHHHHH----HTTSCGGGCTTSCHHHHH
T ss_pred HHHHhcCCCCCCHHHHHHHHhhHHHHHHhcCCC-CCCCCHHHHHHHHHHH----HHhCCHHHHhcCCHHHHH
Confidence 345564 34 3 8999999999985 788 6 9999999999999984 567788888888777765
No 10
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=90.76 E-value=0.19 Score=40.77 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=39.7
Q ss_pred hhHHhhhcC-----CHHHHHHHhcccchhhhc--CCCCCCCHHHHHHHHHHHh
Q psy13775 13 GYHYSNFTA-----RIGLNKSLMLSRRLPILL--GQYVPMAIEEQVAVIYCGV 58 (119)
Q Consensus 13 ~~~Fs~Fgs-----dl~tr~~L~rG~Rl~ElL--~q~~Plsv~eQV~iL~a~~ 58 (119)
.+.+.+||+ |..|+..+.+|+++.+.| +.++|.|.++|+..|+.+-
T Consensus 383 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~fl~Q~~~~~~~~~~~~~~~~~~~ 435 (438)
T 2dpy_A 383 NRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERADWEDSLQALDLIF 435 (438)
T ss_dssp GGGTSSSSCCCTTSCHHHHHHHTTHHHHHHHHCCCTTCCCCHHHHHHHHHHHS
T ss_pred HHHHHHhcCCcCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHH
Confidence 566778866 448899999999999999 9999999999999998763
No 11
>2ck3_D ATP synthase subunit beta\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_D* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ...
Probab=90.26 E-value=0.32 Score=40.38 Aligned_cols=56 Identities=11% Similarity=0.030 Sum_probs=43.4
Q ss_pred hhHHhhhcCCH---HHHHHHhcccchhhhc--CCC----------CCCCHHHHHHHHHHHhcCcCCCCChh
Q psy13775 13 GYHYSNFTARI---GLNKSLMLSRRLPILL--GQY----------VPMAIEEQVAVIYCGVRGHLDKLDPA 68 (119)
Q Consensus 13 ~~~Fs~Fgsdl---~tr~~L~rG~Rl~ElL--~q~----------~Plsv~eQV~iL~a~~~G~ld~ipv~ 68 (119)
..+++.+|.|. .++..|++|+++.+.| +.| ...+.++-+.-|..+-+|-+|++|.+
T Consensus 389 ~~li~i~G~~~l~~~d~~~l~~~~~i~~fL~Q~~~v~~~f~~~~g~~~~~~~t~~~l~~il~g~~d~~pe~ 459 (482)
T 2ck3_D 389 QDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQ 459 (482)
T ss_dssp HHHHHHHCGGGSCHHHHHHHHHHHHHHHHTCCCCGGGHHHHSSCCCCCCHHHHHHHHHHHHTTTTTTSCGG
T ss_pred HHHHHHhCCCcCCHHHHHHHHHHHHHHHHHcCCchHHHHhhcCccccCCHHHHHHHHHHHhcccccCCCHH
Confidence 34568899874 8899999999999999 533 66777777777777777777777765
No 12
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=89.78 E-value=0.42 Score=39.52 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=46.6
Q ss_pred hhhHHhhhcC-CH--HHHHHHhcccchhhhc--CCC----------CCCCHHHHHHHHHHHhcCcCCCCChhh
Q psy13775 12 AGYHYSNFTA-RI--GLNKSLMLSRRLPILL--GQY----------VPMAIEEQVAVIYCGVRGHLDKLDPAK 69 (119)
Q Consensus 12 ~~~~Fs~Fgs-dl--~tr~~L~rG~Rl~ElL--~q~----------~Plsv~eQV~iL~a~~~G~ld~ipv~~ 69 (119)
...+++.||. ++ .++..+++|+++.+.| +.| ...|.++.+-.|..+-+|-+|.+|.+.
T Consensus 380 ~~~li~i~g~~~ls~~d~~~l~~~~~i~~fL~Q~~~~~~~~~~~~~~~~~~~~t~~~l~~i~~~~~~~~~~~~ 452 (473)
T 1sky_E 380 LQDIIAILGMDELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDR 452 (473)
T ss_dssp HHHHHHHHCSTTCTTHHHHHHHHHHHHHHHTCBCCTTTHHHHSCCCCCCCHHHHHHHHHHHHTTTTTTSCGGG
T ss_pred HHHHHHhhCcccCCHHHHHHHHHHHHHHHHHcCCchHhhhhhccCCccCCHHHHHHHHHHHhcccccCCCHHH
Confidence 4456899997 44 8899999999999999 544 567888888888888888888888764
No 13
>1fx0_B ATP synthase beta chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_B*
Probab=86.45 E-value=0.52 Score=39.26 Aligned_cols=57 Identities=12% Similarity=0.111 Sum_probs=48.2
Q ss_pred hhHHhhhcCC-H--HHHHHHhcccchhhhc--CCC----------CCCCHHHHHHHHHHHhcCcCCCCChhh
Q psy13775 13 GYHYSNFTAR-I--GLNKSLMLSRRLPILL--GQY----------VPMAIEEQVAVIYCGVRGHLDKLDPAK 69 (119)
Q Consensus 13 ~~~Fs~Fgsd-l--~tr~~L~rG~Rl~ElL--~q~----------~Plsv~eQV~iL~a~~~G~ld~ipv~~ 69 (119)
..+.+.+|.| + .++..|++|+++.+.| +.| ...+.++.+--|..+-+|-+|++|.+.
T Consensus 402 ~~li~i~G~d~ls~~d~~~l~~~~~i~~fL~Q~~~v~e~ft~~~g~~v~~~~t~~~l~~il~g~~d~~pe~~ 473 (498)
T 1fx0_B 402 QDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDSLPEQA 473 (498)
T ss_dssp HHHHHHHCSTTSCTTTHHHHHHHHHHHHHTCCCCSSCTTTSCSCCCCCCHHHHHHHHHTTTTTTTSSSCGGG
T ss_pred HHHHHHhCCCcCCHHHHHHHHHHHHHHHHHcCCchHHHHhhcCCCcccCHHHHHHHHHHHhcCcccCCCHHH
Confidence 3456789998 4 8899999999999999 544 788999999999999899999998763
No 14
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=84.80 E-value=0.75 Score=39.18 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=47.4
Q ss_pred hcCCH---HHHHHHhcccchhh-hc--CCCCC----CCHHHHHHHHHHH------hcCcCC-CCChhhHHHHHHHHHHHH
Q psy13775 19 FTARI---GLNKSLMLSRRLPI-LL--GQYVP----MAIEEQVAVIYCG------VRGHLD-KLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 19 Fgsdl---~tr~~L~rG~Rl~E-lL--~q~~P----lsv~eQV~iL~a~------~~G~ld-~ipv~~I~~fe~~ll~~l 81 (119)
+|.|- ..+..|++|+++.+ .| +.|+| .|.++|+.+|-.+ ...+++ .+|.++|.++-..++..+
T Consensus 484 ~G~d~Ls~~dk~~l~~a~~i~e~fL~Q~~f~~~d~~~~~~kq~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 563 (600)
T 3vr4_A 484 VGIDSLSDNDRLTLEVAKSIREDYLQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGAYFNEIMEGTVAVRERI 563 (600)
T ss_dssp TCGGGSCHHHHHHHHHHHHHHHHTTCCCTTSTTTTCCCHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHCHHHHHHH
T ss_pred cCCccCCHHHHHHHHHHHHHHHHhCCCCCcCCccccCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHH
Confidence 78884 99999999999986 77 77888 8999999776554 222333 588999988644555555
Q ss_pred H
Q psy13775 82 K 82 (119)
Q Consensus 82 ~ 82 (119)
.
T Consensus 564 ~ 564 (600)
T 3vr4_A 564 S 564 (600)
T ss_dssp H
T ss_pred H
Confidence 4
No 15
>3mfy_A V-type ATP synthase alpha chain; A-type ATP synthase, P loop, phenylalanine mutant, hydrolase; 2.35A {Pyrococcus horikoshii} PDB: 3i4l_A* 3i72_A 3i73_A* 3p20_A 3ikj_A 3qg1_A 3nd8_A 3nd9_A 1vdz_A 3qia_A 3qjy_A 3m4y_A 3se0_A 3sdz_A
Probab=83.83 E-value=1.5 Score=37.29 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=45.0
Q ss_pred hcCC-H--HHHHHHhcccchhh-hc--CCCCCC----CHHHHHHHHHHHh------cCcCC-CCChhhHHHHHHHHHHHH
Q psy13775 19 FTAR-I--GLNKSLMLSRRLPI-LL--GQYVPM----AIEEQVAVIYCGV------RGHLD-KLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 19 Fgsd-l--~tr~~L~rG~Rl~E-lL--~q~~Pl----sv~eQV~iL~a~~------~G~ld-~ipv~~I~~fe~~ll~~l 81 (119)
+|.| | ..+..|++|+++.| .| +.|+|+ |.++|+.+|-.+. ..++. .++.++|.+. .+...+
T Consensus 479 ~G~d~Ls~~dk~~l~~ar~i~e~fL~Q~~f~~~d~~~~~~k~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~ 556 (588)
T 3mfy_A 479 VGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAINRGVPLEEIAKL--PVREEI 556 (588)
T ss_dssp HCSTTCCHHHHHHHHHHHHHHHHTTCCCTTSTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTC--HHHHHH
T ss_pred cCCccCCHHHHHHHHHHHHHHHHhcCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhcC--cHHHHH
Confidence 8999 4 99999999999986 77 889999 9999998766541 12222 4788888772 344444
Q ss_pred H
Q psy13775 82 K 82 (119)
Q Consensus 82 ~ 82 (119)
.
T Consensus 557 ~ 557 (588)
T 3mfy_A 557 G 557 (588)
T ss_dssp T
T ss_pred H
Confidence 3
No 16
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=78.33 E-value=2.9 Score=26.22 Aligned_cols=31 Identities=16% Similarity=0.463 Sum_probs=27.5
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFLAN 116 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~~~ 116 (119)
.+++++|..+..++++.++.|.+...+|+++
T Consensus 12 ~~Lv~~idp~~~ld~~vee~ll~lADdFV~~ 42 (76)
T 1h3o_B 12 QDLVREVDPNEQLDEDVEEMLLQIADDFIES 42 (76)
T ss_dssp HHHHHHHCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4688888889999999999999999999864
No 17
>1spg_A Hemoglobin; carbon monoxide, R-state, teleost FISH effect, oxygen transport; HET: HEM; 1.95A {Leiostomus xanthurus} SCOP: a.1.1.2
Probab=77.30 E-value=9.5 Score=25.62 Aligned_cols=90 Identities=8% Similarity=0.077 Sum_probs=58.3
Q ss_pred hhhHHhhhcCCH--HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI--GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
.-..|++||+|+ ++.+.-.||.+++..| .--. .... +-=.+-.+.---.|+++....+...|+..|...
T Consensus 40 ~k~~F~~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ld~---l~~~-l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~ 115 (144)
T 1spg_A 40 TKIYFSEWGQDLGPQTPQVRNHGAVIMAAVGKAVKSIDN---LVGG-LSQLSELHAFKLRVDPANFKILAHNIILVISMY 115 (144)
T ss_dssp GGGGGTTSCSCSSTTSHHHHHHHHHHHHHHHHHHHTTTC---HHHH-HHHHHHHHHTTSCCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHhHHh---HHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 456899998455 7777889999999888 2222 2221 111223333324688999999999998888643
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
. +..+|++..+.-.+++..+.
T Consensus 116 l---------g~~~t~e~~~AW~k~~~~va 136 (144)
T 1spg_A 116 F---------PGDFTPEVHLSVDKFLACLA 136 (144)
T ss_dssp S---------TTTCCHHHHHHHHHHHHHHH
T ss_pred c---------ccCCCHHHHHHHHHHHHHHH
Confidence 2 44588887777766665544
No 18
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=76.09 E-value=13 Score=24.83 Aligned_cols=92 Identities=11% Similarity=0.013 Sum_probs=61.0
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
....|++|+.+. ...+...||.|++..| .--.|=.+. ..+-=.+-.+.-.-.|+++....+...|+..|....
T Consensus 46 ~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~-~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~~~l 124 (147)
T 2zs0_C 46 AQGLFSGVSADNPDSADFRAHCVRVVNGLDVAINMLNDPAVLN-EQLAHLSAQHQARAGVAAAHFDVMAEAFAEVMPQVS 124 (147)
T ss_dssp GGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHH-HHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHGGGTS
T ss_pred HHHhccccCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHc
Confidence 456899998766 8888899999999887 223321121 122222333333347999999999999999887542
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+ .++++.+.++...+....
T Consensus 125 ---------g-~~t~eAW~~~~~~i~~~l 143 (147)
T 2zs0_C 125 ---------S-CFSSDSWNRCFARIANGI 143 (147)
T ss_dssp ---------T-TCCHHHHHHHHHHHHHHH
T ss_pred ---------C-CCCHHHHHHHHHHHHHHH
Confidence 3 577777777776665543
No 19
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=73.60 E-value=17 Score=24.01 Aligned_cols=91 Identities=10% Similarity=-0.057 Sum_probs=61.0
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
...+|++|+.+- ...+.-.||.+++..| .--.| +.-...+-=.+-.+.-. .|+++....+...|+..|....
T Consensus 44 ~k~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ldd~-~~l~~~l~~L~~~H~~~-gV~p~~f~~~~~~ll~~l~~~l 121 (144)
T 1yhu_B 44 ARDMFKRVRGDNIHTPAFRAHATRVLGGLDMCIALLDDE-PVLNTQLAHLAKQHETR-GVEAAHYDTVNHAVMMGVENVI 121 (144)
T ss_dssp GGGGGGGGTTTCSSSHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHc
Confidence 446899997644 7778889999999888 22222 22223333344555555 8999999999999999886431
Q ss_pred hHHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKE-GKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~-~~l~~~~~~~L~~~i~~~ 113 (119)
+ ..++++.+.++...+...
T Consensus 122 ---------g~~~~t~~AW~~~~~~i~~~ 141 (144)
T 1yhu_B 122 ---------GSEVFDQDAWKPCLNVITNG 141 (144)
T ss_dssp ---------CSSSCCHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCHHHHHHHHHHHHHH
Confidence 3 257787777776666554
No 20
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=72.34 E-value=18 Score=23.90 Aligned_cols=90 Identities=8% Similarity=0.008 Sum_probs=58.6
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
...+|++|+... ...+...||.|++..| .--.|-.+ .-.+-=.+-.+.-. .|+++....+...|+..|....
T Consensus 42 ~k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ld~~~~l-~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll~~l~~~l 119 (140)
T 2zs0_A 42 SRALFSGVGVDDMNSAAFTAHCLRVTGALNRLISQLDQQATI-NADLAHLAGQHASR-NLDASNFAAMGQAVMSVVPTHL 119 (140)
T ss_dssp GGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHHGGG-CCCHHHHHHHHHHHHHHGGGGC
T ss_pred HHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 446899997655 7778889999988877 32332112 22222233444444 8999999999999999887542
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+ .++++.+......+...
T Consensus 120 ---------g-~~t~~AW~~~~~~ia~~ 137 (140)
T 2zs0_A 120 ---------D-CFNQHAWGECYERIASG 137 (140)
T ss_dssp ---------S-CCCHHHHHHHHHHHHHH
T ss_pred ---------C-CCCHHHHHHHHHHHHHH
Confidence 3 46776666666665544
No 21
>2zs0_D Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2zfo_D* 2zs1_D* 2d2m_D* 2d2n_D*
Probab=71.09 E-value=15 Score=24.79 Aligned_cols=92 Identities=5% Similarity=-0.086 Sum_probs=58.3
Q ss_pred hhhHHhhhcCCHHHHHHHhcccchhhhc-CCCCCCCHHHHHH---HHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhH
Q psy13775 12 AGYHYSNFTARIGLNKSLMLSRRLPILL-GQYVPMAIEEQVA---VIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERG 87 (119)
Q Consensus 12 ~~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-~q~~Plsv~eQV~---iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~ 87 (119)
.-..|++|+ ++.+.+...||.|++..| .--.-+.-.+.+. .=.+..+-..-.|+++....+...|+..|....
T Consensus 46 ~k~~F~~~~-~~~~~~~~aH~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~~~gV~p~~F~~~~~~ll~~l~~~l-- 122 (145)
T 2zs0_D 46 SPSMFPGGG-DSSSAEFLAQVSRVISGADIAINSLTNRATCDSLLSHLNAQHKAISGVTGAAVTHLSEAISSVVAQVL-- 122 (145)
T ss_dssp CGGGSGGGG-CTTSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHc--
Confidence 445899999 667888899999999877 1111111112221 112333333337999999999999999886432
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 88 LLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 88 ~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+ .++++.+++....+....
T Consensus 123 -------g-~~t~~AW~k~~~~v~~~l 141 (145)
T 2zs0_D 123 -------P-SAHIDAWGYCMAYIAAGI 141 (145)
T ss_dssp -------T-TCCHHHHHHHHHHHHHHH
T ss_pred -------C-CCCHHHHHHHHHHHHHHH
Confidence 3 567777777766665543
No 22
>2zs0_B Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_B* 2d2m_B* 2zfo_B* 2zs1_B*
Probab=69.82 E-value=21 Score=23.59 Aligned_cols=91 Identities=9% Similarity=-0.032 Sum_probs=59.6
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
...+|++|+... .+.+.-.||.|++..| .--.|-.+ ...+-=.+-.+--. .|+++....+...|+..|....
T Consensus 42 ~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l-~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll~~l~~~l 119 (142)
T 2zs0_B 42 ARGLFSRVNGNDIDSSEFQAHSLRVLGGLDMCVASLDDVPVL-NALLARLNSQHDSR-GIPAAGYPAFVASAISAVRATV 119 (142)
T ss_dssp GGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHHTTS-CCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHc
Confidence 456899997655 7777788999988877 22333222 22233334455544 8999999999999999886532
Q ss_pred hHHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEG-KITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~-~l~~~~~~~L~~~i~~~ 113 (119)
+. .++++.+.+....+...
T Consensus 120 ---------g~~~~t~~AW~~~~~~ia~~ 139 (142)
T 2zs0_B 120 ---------GARSFDNDAWNSCMNQIVSG 139 (142)
T ss_dssp ---------CGGGCCHHHHHHHHHHHHHH
T ss_pred ---------CCcCCCHHHHHHHHHHHHHH
Confidence 22 47777666666665543
No 23
>1cg5_B Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_B*
Probab=69.75 E-value=9.7 Score=25.67 Aligned_cols=88 Identities=6% Similarity=-0.053 Sum_probs=57.6
Q ss_pred hhhHHhhhcCCH--HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI--GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
.-..|++||.|+ ++.+.-.||+|++..| ..-..-+.-.++.-..+. -.|++++-.-+-..|+..|...
T Consensus 38 ~k~~F~~~~~d~~~~~~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~-----~~V~p~~f~~~g~~Ll~~l~~~ 112 (141)
T 1cg5_B 38 TTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKVEINFQNLSGKHQE-----IGVDTQNFKLLGQTFMVELALH 112 (141)
T ss_dssp GGTTCGGGTTCCSTTSHHHHHHHHHHHHHHHHHHHTTTSHHHHTHHHHHHHHH-----HTCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH
Confidence 456899998566 7888889999999888 222211222233333333 3688899888888888888643
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
. +..+|++..+.-.++....
T Consensus 113 l---------g~~~t~e~~~AW~k~~~~v 132 (141)
T 1cg5_B 113 Y---------KKTFRPKEHAAAYKFFRLV 132 (141)
T ss_dssp H---------GGGCCHHHHHHHHHHHHHH
T ss_pred c---------CCCCCHHHHHHHHHHHHHH
Confidence 2 3348887776666665544
No 24
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=66.63 E-value=12 Score=25.07 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=58.4
Q ss_pred hhhHHhhhcCCH---HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI---GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl---~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
....|++|+... ...+.-.||++++..| ....-.+.-...+-=.+-.+.- -.|+.+....+...|+..|...
T Consensus 49 ~k~~F~~f~~~~~~~~n~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~~~H~~-~~V~p~~f~~~~~~Ll~~l~~~ 127 (151)
T 1sct_B 49 AKGKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAVNHIN-RQISADEFGEIVGPLRQTLKAR 127 (151)
T ss_dssp HHHHTGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH-TTCCHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHH
Confidence 346888887554 6677778999999888 2222211112222223333333 4789999999999999888643
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
. +..+|++..+.-.+++..+.
T Consensus 128 l---------g~~~t~e~~~AW~~~~~~va 148 (151)
T 1sct_B 128 M---------GNYFDEDTVAAWASLVAVVQ 148 (151)
T ss_dssp H---------GGGCCHHHHHHHHHHHHHHH
T ss_pred h---------cccCCHHHHHHHHHHHHHHH
Confidence 1 33488887777776665543
No 25
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=64.81 E-value=27 Score=23.30 Aligned_cols=91 Identities=10% Similarity=-0.020 Sum_probs=59.2
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
....|++|+... ...+...||.|++..| .--.|-.+. ..+-=.+-.+.-.-.|+++....+...|+..|....
T Consensus 46 ~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~-~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l~~~l 124 (149)
T 1yhu_D 46 AVGLFGAVKGDEVNSNEFKAHCIRVVNGLDSSIGLLSDPATLN-EQLSHLATQHKARSGVTKGGFSAIAQSFLRVMPQVA 124 (149)
T ss_dssp GGGGGGGGTSSSTTSHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHc
Confidence 456899997665 7778889999998887 222222122 222222333433347999999999999999886431
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+ .+|++.+.++...+...
T Consensus 125 ---------g-~~t~~AW~~~~~~ia~~ 142 (149)
T 1yhu_D 125 ---------S-CFNPDAWSRCFNRITTG 142 (149)
T ss_dssp ---------S-SCCHHHHHHHHHHHHHH
T ss_pred ---------C-CCCHHHHHHHHHHHHHH
Confidence 3 57777777766666554
No 26
>1x9f_D Globin C, hemoglobin chain D1, globin III, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_D*
Probab=64.46 E-value=27 Score=22.90 Aligned_cols=90 Identities=11% Similarity=-0.061 Sum_probs=56.8
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
....|++|+... .+.+.-.||.|++..| .--.|-.+ ...+-=.+-.+.-. .|+++....+...|+..|....
T Consensus 42 ~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ld~~~~l-~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll~~l~~~l 119 (140)
T 1x9f_D 42 IKAPFSRVRGDNIYSPEFGAHSQRVLSGLDITISMLDTPDML-AAQLAHLKVQHVER-NLKPEFFDIFLKHLLHVLGDRL 119 (140)
T ss_dssp GGGGGGGGTTTCTTSHHHHHHHHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 456899987655 6677788999999888 22222212 22222233444444 8999999999999999887542
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTN 112 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~ 112 (119)
+..+|++.+.++...+..
T Consensus 120 ---------g~~~t~~AW~~~~~~ia~ 137 (140)
T 1x9f_D 120 ---------GTHFDFGAWHDCVDQIID 137 (140)
T ss_dssp ---------GGGCCHHHHHHHHHHHHH
T ss_pred ---------cccCCHHHHHHHHHHHHH
Confidence 223666656555555443
No 27
>1out_A Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_A*
Probab=62.98 E-value=26 Score=23.36 Aligned_cols=90 Identities=7% Similarity=0.034 Sum_probs=57.1
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++||... ++.+.-.||.+++..| ..-...+.-.++ +-.+.---.|++++...+...|+..|....
T Consensus 40 ~k~~F~~f~~~~~~~~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L----~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~l 115 (143)
T 1out_A 40 TKTYFSHWADLSPGSGPVKKHGGIIMGAIGKAVGLMDDLVGGMSAL----SDLHAFKLRVDPGNFKILSHNILVTLAIHF 115 (143)
T ss_dssp GGGGGTTSSCCSTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHTHHH----HHHHHHTTCCCTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHH----HHHHHHHhCCCHHHHHHHHHHHHHHHHHHc
Confidence 456899998555 7788889999999888 222211112222 222222236888998888888888886432
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..+|++..+.-.+++..+.
T Consensus 116 ---------g~~~t~e~~~AW~k~~~~va 135 (143)
T 1out_A 116 ---------PSDFTPEVHIAVDKFLAAVS 135 (143)
T ss_dssp ---------TTTCCHHHHHHHHHHHHHHH
T ss_pred ---------cccCCHHHHHHHHHHHHHHH
Confidence 44588877776666655443
No 28
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=61.56 E-value=24 Score=23.57 Aligned_cols=87 Identities=10% Similarity=0.077 Sum_probs=55.0
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
.-..|++|+... ...+.-.||.+++..| .--.|-+.-.++.-..+.+ -.|+++....+...|+..|
T Consensus 36 ~k~~F~~f~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~~l~~L~~~H~~k----~~V~p~~f~~~~~~Ll~~l 111 (147)
T 2nrl_A 36 TQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKGSHAAILKPLANSHATK----HKIPINNFKLISEVLVKVM 111 (147)
T ss_dssp HHTTCTTTTTCCGGGTTTCHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHT----TCCCTHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCCHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 346788886442 6777788999999888 3222222223333333332 2688999999999999888
Q ss_pred HhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 82 KSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 82 ~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
... ..+|++..+.-.+++..+
T Consensus 112 ~~~-----------~~~t~e~~~AW~~~~~~v 132 (147)
T 2nrl_A 112 QEK-----------AGLDAGGQTALRNVMGII 132 (147)
T ss_dssp HHH-----------SCCCHHHHHHHHHHHHHH
T ss_pred HHh-----------ccCCHHHHHHHHHHHHHH
Confidence 532 458887666666555443
No 29
>3d1k_A Hemoglobin subunit alpha-1; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 2aa1_A* 1t1n_A* 1la6_A* 3nfe_A* 3ng6_A* 2h8f_A* 1pbx_A* 1s5x_A* 1s5y_A* 1hbh_A* 2h8d_A* 2peg_A* 3gkv_A* 3gqg_A* 1v4x_A* 1v4u_A* 1v4w_A*
Probab=61.37 E-value=32 Score=22.69 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=57.3
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++|+... ++.+.-.||.+++..| .--...+.-.++.-..+ ---.|+++....+...|+..|....
T Consensus 39 ~~~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~----~~~~V~p~~f~~~~~~ll~~l~~~l 114 (142)
T 3d1k_A 39 TKIYFSHWPDVTPGSPNIKAHGKKVMGGIALAVSKIDDLKTGLMELSEQHA----YKLRVDPSNFKILNHCILVVISTMF 114 (142)
T ss_dssp GGGGGTTSSCCSTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HTSCCCGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----HhcCCChHHHHHHHHHHHHHHHHHc
Confidence 456899997443 6677778999999888 22222222222222233 2236889999999999998886432
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..+|++..+.-.+++..+.
T Consensus 115 ---------g~~~t~e~~~AW~~~~~~v~ 134 (142)
T 3d1k_A 115 ---------PKEFTPEAHVSLDKFLSGVA 134 (142)
T ss_dssp ---------TTTCCHHHHHHHHHHHHHHH
T ss_pred ---------cccCCHHHHHHHHHHHHHHH
Confidence 34588877766666655443
No 30
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=60.67 E-value=27 Score=23.18 Aligned_cols=89 Identities=9% Similarity=-0.004 Sum_probs=56.4
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++|+... ...+.-.||++++..| ..-.+-+.-.++.-..+. --.|+++....+...|+..|....
T Consensus 40 ~k~~F~~~~d~~~~n~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~ll~~l~~~l 115 (143)
T 1xq5_A 40 TKTYFSHWKDLSPGSAPVNKHGKTIMGGIVDAVASIDDLNAGLLALSELHAF----TLRVDPANFKILSHCILVLLAVKF 115 (143)
T ss_dssp GGGGGTTCSCCSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHTHHHHHHHHH----TSCCCTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHh
Confidence 456899997544 6788889999999888 222211222222223322 236888999999999998886532
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+..+|++..+.-.+++..+
T Consensus 116 ---------g~~~t~e~~~AW~k~~~~v 134 (143)
T 1xq5_A 116 ---------PKDFTPEVHISYDKFFSAL 134 (143)
T ss_dssp ---------GGGCCHHHHHHHHHHHHHH
T ss_pred ---------hccCCHHHHHHHHHHHHHH
Confidence 3347887766666655544
No 31
>3bom_A Hemoglobin subunit alpha-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_A*
Probab=60.12 E-value=33 Score=22.73 Aligned_cols=90 Identities=8% Similarity=0.119 Sum_probs=56.6
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc----CC-CCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL----GQ-YVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL----~q-~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++|+... ++.+.-.||.+++..| .. -...+.-.++.-..+. --.|+++....+-..|+..|....
T Consensus 40 ~~~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~Ll~~l~~~l 115 (143)
T 3bom_A 40 TKAYFSHWASVAPGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHAT----KLRVDPTNFKILAHNLIVVIAAYF 115 (143)
T ss_dssp GGGGCTTSSCCSTTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH----TTCCCTTHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHH----HhCCCHhHHHHHHHHHHHHHHHHc
Confidence 446899997444 6677778999999888 22 2211222222222322 236889999999999998886432
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..+|++..+.-.+++..+.
T Consensus 116 ---------g~~~t~e~~~AW~~~~~~va 135 (143)
T 3bom_A 116 ---------PAEFTPEIHLSVDKFLQQLA 135 (143)
T ss_dssp ---------TTTCCHHHHHHHHHHHHHHH
T ss_pred ---------cccCCHHHHHHHHHHHHHHH
Confidence 34588877766666655443
No 32
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=60.08 E-value=34 Score=22.59 Aligned_cols=92 Identities=7% Similarity=-0.052 Sum_probs=60.3
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
....|++|+... .+.+.-.||.+++..| .--.|-.+ ...+-=.+-.+.-. .|+++....+...|+..|....
T Consensus 44 ~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l-~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll~~l~~~l 121 (145)
T 1x9f_B 44 SRSLFKRVHGDDTSHPAFIAHADRVLGGLDIAISTLDQPATL-KEELDHLQVQHEGR-KIPDNYFDAFKTAILHVVAAQL 121 (145)
T ss_dssp GGGGGGGGTTTCTTSHHHHHHHHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHh
Confidence 456899887654 6677788999999888 22222212 22233344445554 8999999999999999886532
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..++++.+.++...+....
T Consensus 122 ---------g~~~t~~AW~~~~~~ia~~l 141 (145)
T 1x9f_B 122 ---------GRCYDREAWDACIDHIEDGI 141 (145)
T ss_dssp ---------TTSCCHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCHHHHHHHHHHHHHHh
Confidence 33477777766666665543
No 33
>1cg5_A Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_A*
Probab=59.60 E-value=34 Score=22.62 Aligned_cols=89 Identities=12% Similarity=0.028 Sum_probs=57.3
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc----CC-CCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL----GQ-YVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL----~q-~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++|+... +..+.-.||.+++..| .. -...+.-.++.-..+ ---.|+++....+...|+..|...
T Consensus 39 ~k~~F~~f~~~~~~n~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~----~~~~V~p~~f~~~~~~ll~~l~~~- 113 (141)
T 1cg5_A 39 TKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLDNLHLHLEDLARKHG----ENLLVDPHNFHLFADCIVVTLAVN- 113 (141)
T ss_dssp GGGGGTTCSCCSTTSHHHHHHHHHHHHHHHHHTTCTTSHHHHHHHHHHHHH----HTTCCCTHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhHHhCCCCCCCHhHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHH----HHcCCCHHHHHHHHHHHHHHHHHH-
Confidence 456899997554 7888889999999888 21 111111222222222 223688999999988888888642
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
-+ .+|++..+.-.++...+.
T Consensus 114 --------lg-~~t~e~~~AW~k~~~~va 133 (141)
T 1cg5_A 114 --------LQ-AFTPVTHCAVDKFLELVA 133 (141)
T ss_dssp --------SS-CCCHHHHHHHHHHHHHHH
T ss_pred --------cc-cCCHHHHHHHHHHHHHHH
Confidence 14 688887777666665543
No 34
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=58.62 E-value=38 Score=22.66 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=58.2
Q ss_pred hhhHHhhhcCC--H----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR--I----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd--l----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++|+.. + ...+.-.||.+++..| .--.|-+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 39 ~k~~F~~f~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~~l~~L~~~H~~k----~~V~p~~f~~~~~~Ll~~ 114 (153)
T 1lhs_A 39 TQERFAKFKNLTTIDALKSSEEVKKHGTTVLTALGRILKQKNNHEQELKPLAESHATK----HKIPVKYLEFICEIIVKV 114 (153)
T ss_dssp HHTTCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHH
T ss_pred HHHHhHhhcCCCcHHHHcCCHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHhhhc----cCCCHHHHHHHHHHHHHH
Confidence 34688998643 2 7778889999999888 3233333444444444432 358899999999999988
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
|.... +..+|++..+.-.+++..+
T Consensus 115 l~~~l---------g~~~t~e~~~AW~k~~~~v 138 (153)
T 1lhs_A 115 IAEKH---------PSDFGADSQAAMKKALELF 138 (153)
T ss_dssp HHHHC---------TTTSCHHHHHHHHHHHHHH
T ss_pred HHHHc---------cccCCHHHHHHHHHHHHHH
Confidence 86532 3457887666665555443
No 35
>3gqb_A V-type ATP synthase alpha chain; A3B3, V-ATPase, ATP synthesis, ATP-binding, hydrogen ION TRA hydrolase, ION transport; 2.80A {Thermus thermophilus HB8} PDB: 3a5c_A* 3a5d_A 3j0j_A* 1um2_C
Probab=58.26 E-value=27 Score=29.57 Aligned_cols=54 Identities=7% Similarity=0.116 Sum_probs=39.2
Q ss_pred hcCCH---HHHHHHhcccchhh-hc--CCCCC----CCHHHHHHHHHHHh------cCcCC-CCChhhHHH
Q psy13775 19 FTARI---GLNKSLMLSRRLPI-LL--GQYVP----MAIEEQVAVIYCGV------RGHLD-KLDPAKITT 72 (119)
Q Consensus 19 Fgsdl---~tr~~L~rG~Rl~E-lL--~q~~P----lsv~eQV~iL~a~~------~G~ld-~ipv~~I~~ 72 (119)
+|.|- ..+..|++|+++.+ .| +.|+| .|.++|+.+|-.+. ..++. .++.++|.+
T Consensus 471 ~G~d~Ls~~dk~~l~~a~~i~~~fL~Q~~f~~~d~~~~~~kq~~~l~~i~~~~~~~~~~~~~~~~~~~i~~ 541 (578)
T 3gqb_A 471 VGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYSSMKKAYGIMKMILAFYKEAEAAIKRGVSIDEILQ 541 (578)
T ss_dssp TTGGGCCHHHHHHHHHHHHHHHHHTCCCSSSTTTTCCCHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHTT
T ss_pred cCCccCCHHHHHHHHHHHHHHHHhCCCCCCCCceecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhc
Confidence 78884 89999999999986 77 77888 89999998765541 11221 356666655
No 36
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=57.85 E-value=25 Score=23.35 Aligned_cols=93 Identities=13% Similarity=0.089 Sum_probs=57.7
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCCCC--CCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQYVP--MAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLA 79 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~~P--lsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~ 79 (119)
....|.+|+... ...+.-.||.+++..| .--.+ .+.-...+-=.+-.+.-. .|+++....+...++.
T Consensus 40 ~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll~ 118 (150)
T 1x46_A 40 SQAKFSAFAGKDLESLKDTAPFALHATRIVSVINEAIALMGVAENRPALKNVLKQQGINHKGR-GVTAAHFEEFETALEA 118 (150)
T ss_dssp HHTTCTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHH
T ss_pred HHHhhHhccCCCHHHHhhChHHHHHHHHHHHHHHHHHHHccCcCcHHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHH
Confidence 345788876432 3667778999998887 22220 111122222233334333 7999999999999999
Q ss_pred HHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy13775 80 HIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 115 (119)
Q Consensus 80 ~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~~ 115 (119)
.+... -+ .++++..+.-.+++..+..
T Consensus 119 ~l~~~---------lg-~~t~e~~~AW~~~~~~i~~ 144 (150)
T 1x46_A 119 FLESH---------AS-GYNAGTKKAWDSAFNNMYS 144 (150)
T ss_dssp HHHHH---------ST-TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHH---------hc-cCCHHHHHHHHHHHHHHHH
Confidence 88643 14 6888877776666655443
No 37
>1eca_A Erythrocruorin (AQUO Met); oxygen transport; HET: HEM; 1.40A {Chironomus thummi thummi} SCOP: a.1.1.2 PDB: 1ecd_A* 1ecn_A* 1eco_A*
Probab=57.70 E-value=24 Score=23.34 Aligned_cols=69 Identities=13% Similarity=0.245 Sum_probs=45.3
Q ss_pred hhhHHhhhcC-CH----HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTA-RI----GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 12 ~~~~Fs~Fgs-dl----~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
.-..|++|++ |+ ++.+.-.||.|++..| ....- +.. .+-=.+..+-. -.|+++....+...++..|.
T Consensus 34 ~k~~F~~f~~~~~~~~~~~~~~~~Hg~~V~~~l~~~v~~l~~--l~~-~l~~L~~~H~~-~~V~p~~F~~l~~~ll~~l~ 109 (136)
T 1eca_A 34 IMAKFTQFAGKDLESIKGTAPFETHANRIVGFFSKIIGELPN--IEA-DVNTFVASHKP-RGVTHDQLNNFRAGFVSYMK 109 (136)
T ss_dssp HHTTCTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHTTTC--CHH-HHHHHHHHHGG-GTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccHH--HHH-HHHHHHHhhhc-CCCCHHHHHHHHHHHHHHHH
Confidence 4568999974 33 5688899999999998 32211 111 12222333333 35899999999999999887
Q ss_pred hc
Q psy13775 83 SS 84 (119)
Q Consensus 83 ~~ 84 (119)
..
T Consensus 110 ~~ 111 (136)
T 1eca_A 110 AH 111 (136)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 38
>1v4x_B Hemoglobin beta chain; oxygen transport, heme, respiratory protein, erythrocyte, ROOT effect, SWIM bladder, oxygen storage/transport complex; HET: HEM; 1.60A {Thunnus thynnus} SCOP: a.1.1.2 PDB: 1v4u_B* 1v4w_B*
Probab=55.40 E-value=43 Score=22.25 Aligned_cols=90 Identities=10% Similarity=0.068 Sum_probs=57.0
Q ss_pred hhhHHhhhcC--CH----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTA--RI----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgs--dl----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++|+. ++ .+.+.-.||.+++..| .--...+.-.++.-..+. --.|+++....+...|+..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~s~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~ll~~ 113 (146)
T 1v4x_B 38 TQRYFGAYGDLSTPDAIKGNAKIAAHGVKVLHGLDRAVKNMDNINEAYSELSVLHSD----KLHVDPDNFRILGDCLTVV 113 (146)
T ss_dssp GGGGGTTSCCCSSHHHHHTCHHHHHHHHHHHHTTHHHHHCTTCHHHHTHHHHHHHHH----TTCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhH----hcCCCHHHHHHHHHHHHHH
Confidence 4568999963 22 6788889999999888 222211222222223332 2368899999999999998
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
|.... +..+|++..+.-.+++..+.
T Consensus 114 l~~~l---------g~~~t~e~~~AW~k~~~~va 138 (146)
T 1v4x_B 114 IAANL---------GDAFTVETQCAFQKFLAVVV 138 (146)
T ss_dssp HHHHH---------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHh---------cccCCHHHHHHHHHHHHHHH
Confidence 86432 34488877766666655443
No 39
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=55.23 E-value=44 Score=22.32 Aligned_cols=89 Identities=12% Similarity=0.094 Sum_probs=57.7
Q ss_pred hhhHHhhhcCC----H-HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR----I-GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 12 ~~~~Fs~Fgsd----l-~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
.-..|++|+.. + ...+.-.||+|++.-| ....=.+.-.-.+-=.+-.+-- -.|+.+.-..+...|+..|.
T Consensus 42 ~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~-~~V~p~~f~~~~~~Ll~~l~ 120 (147)
T 1h97_A 42 YISHFSRLEGHTIENVMQSEGIKHYARTLTEAIVHMLKEISNDAEVKKIAAQYGKDHTS-RKVTKDEFMSGEPIFTKYFQ 120 (147)
T ss_dssp GGGGSGGGTTCCTTTGGGSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHTTTT-SSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Confidence 44689999642 3 6888889999999888 2222111111222223444444 48999999999999999885
Q ss_pred hchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 83 SSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 83 ~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.. .++++..+.-.++....
T Consensus 121 ~~------------~~t~e~~~AW~k~~~~v 139 (147)
T 1h97_A 121 NL------------VKDAEGKAAVEKFLKHV 139 (147)
T ss_dssp HH------------SSSHHHHHHHHHHHHHH
T ss_pred Hc------------CCCHHHHHHHHHHHHHH
Confidence 42 47888777666665544
No 40
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=55.23 E-value=42 Score=22.38 Aligned_cols=93 Identities=10% Similarity=0.134 Sum_probs=59.7
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
....|.+|+... ...+.-.||.+++..| ....- +.-...+-=.+-.+.- -.|+++....+...++..|.
T Consensus 50 ~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ld~-~~l~~~l~~L~~~H~~-~gV~p~~f~~~~~~ll~~l~ 127 (158)
T 1hlb_A 50 AQNKFPQMAGMSASQLRSSRQMQAHAIRVSSIMSEYVEELDS-DILPELLATLARTHDL-NKVGADHYNLFAKVLMEALQ 127 (158)
T ss_dssp HHHTSGGGTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTTCCT-TSHHHHTHHHHHHHHH-TTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCc-HHHHHHHHHHHHHhhc-cCCCHHHHHHHHHHHHHHHH
Confidence 446788885432 6677788999999888 22222 2222222223333333 37899999999999999886
Q ss_pred hchhHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy13775 83 SSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 115 (119)
Q Consensus 83 ~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~~ 115 (119)
... +..++++..+.-.+++..+..
T Consensus 128 ~~l---------g~~~t~e~~~AW~~~~~~v~~ 151 (158)
T 1hlb_A 128 AEL---------GSDFNEKTRDAWAKAFSVVQA 151 (158)
T ss_dssp HHH---------TTCCCTHHHHHHHHHHHHHHH
T ss_pred HHh---------ccCCCHHHHHHHHHHHHHHHH
Confidence 431 346888887777777766544
No 41
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=54.91 E-value=39 Score=22.42 Aligned_cols=91 Identities=11% Similarity=-0.037 Sum_probs=57.9
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
...+|++|+.+. ...+.-.||.|++..| .--.|=.+ ...+-=.+-.+.---.|+++....+...|+..|...
T Consensus 47 ~k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ldd~~~l-~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~- 124 (148)
T 1yhu_C 47 AKNLFTRVNVADINSPEFQGHVVRVMGGLDILINALDDIPTL-ESMLDHLAGQHAVRDGVTGAGFQLMATVLMESLPQV- 124 (148)
T ss_dssp GGGGSGGGTGGGTTSHHHHHHHHHHHHHHHHHHHGGGCHHHH-HHHHHHHHHHHHTSTTCCTTHHHHHHHHHHHHHHHH-
T ss_pred HHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHH-
Confidence 456899997544 7788889999999888 22232111 112222222333213689999999999999988643
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
-+ .++++.+.++...+...
T Consensus 125 --------lg-~~t~eAW~~~~~~va~~ 143 (148)
T 1yhu_C 125 --------VE-GFNPDAWASCLAGIAAA 143 (148)
T ss_dssp --------SS-SCCHHHHHHHHHHHHHH
T ss_pred --------cC-CCCHHHHHHHHHHHHHH
Confidence 13 57887777666666544
No 42
>1out_B Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_B*
Probab=54.10 E-value=45 Score=22.16 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=57.1
Q ss_pred hhhHHhhhcCC-----H-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR-----I-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd-----l-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++|+.. + ...+.-.||.+++..| .--..-+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 38 ~k~~F~~f~d~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~k----~~V~p~~f~~~~~~Ll~~ 113 (146)
T 1out_B 38 TQRYFGSFGNVSTPAAIMGNPKVAAHGKVVCGALDKAVKNMGNILATYKSLSETHANK----LFVDPDNFRVLADVLTIV 113 (146)
T ss_dssp GGGGCGGGCCCSSHHHHHHCHHHHHHHHHHHHTHHHHHHTTTCHHHHTHHHHHHHHHT----TCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcHHHhccCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHh----cCCCHHHHHHHHHHHHHH
Confidence 45689999732 2 6788889999999888 2222111122222223222 358899999999999998
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
|.... +..+|++..+.-.+++..+.
T Consensus 114 l~~~l---------g~~~t~e~~~AW~k~~~~va 138 (146)
T 1out_B 114 IAAKF---------GASFTPEIQATWQKFMKVVV 138 (146)
T ss_dssp HHHHH---------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHh---------hccCCHHHHHHHHHHHHHHH
Confidence 86432 34488887777666665543
No 43
>1jeb_A Hemoglobin zeta chain; oxygen transport, oxygen storage/transport complex; HET: HEM; 2.10A {Homo sapiens} SCOP: a.1.1.2
Probab=52.88 E-value=37 Score=22.27 Aligned_cols=89 Identities=8% Similarity=0.088 Sum_probs=54.3
Q ss_pred hhhHHhhhcCCHHHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchh
Q psy13775 12 AGYHYSNFTARIGLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 86 (119)
Q Consensus 12 ~~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~ 86 (119)
....|++|.-..++.+.-.||++++..| .--.+-+.-.++.-..+. --.|+++....+...|+..+....
T Consensus 40 ~k~~F~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ld~l~~~l~~L~~~H~~----k~~V~p~~f~~~~~~ll~~l~~~l- 114 (142)
T 1jeb_A 40 TKTYFPHFDLHPGSAQLRAHGSKVVAAVGDAVKSIDDIGGALSKLSELHAY----ILRVDPVNFKLLSHCLLVTLAARF- 114 (142)
T ss_dssp GGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHTHHHHHHHHH----TSCCCTHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHhhhh----ccCCCHHHHHHHHHHHHHHHHHHc-
Confidence 4467888822226677778899998888 222221122222222222 136889999999999998886432
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 87 GLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 87 ~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+..+|++..+.-.+++..+
T Consensus 115 --------g~~~t~e~~~AW~~~~~~v 133 (142)
T 1jeb_A 115 --------PADFTAEAHAAWDKFLSVV 133 (142)
T ss_dssp --------TTTCCHHHHHHHHHHHHHH
T ss_pred --------cccCCHHHHHHHHHHHHHH
Confidence 3458887766666665544
No 44
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=52.60 E-value=48 Score=21.94 Aligned_cols=88 Identities=6% Similarity=-0.040 Sum_probs=54.0
Q ss_pred hhhHHhh-hcCCH-----HHHHHHhcccchhhhc----CC-CCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSN-FTARI-----GLNKSLMLSRRLPILL----GQ-YVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~-Fgsdl-----~tr~~L~rG~Rl~ElL----~q-~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
...+|.+ |++-. ...+.-.||.+++..| .. -.| +.-...+--.+-.+.-+ .|+++....+...|+..
T Consensus 41 ~k~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~-~~l~~~l~~L~~~H~~~-gV~p~~f~~~~~~ll~~ 118 (152)
T 3pt8_A 41 TLTPFKSLFGGLTLAQLQDNPKMKAQSLVFCNGMSSFVDHLDDN-DMLVVLIQKMAKLHNNR-GIRASDLRTAYDILIHY 118 (152)
T ss_dssp GGGGGHHHHTTSCHHHHTTCHHHHHHHHHHHHHHHHHHTTTTCH-HHHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 3578888 86533 5567778999999888 22 233 11112222223333322 78999999999999888
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTN 112 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~ 112 (119)
|.. +..++++..+.-.+++..
T Consensus 119 l~~-----------g~~~t~e~~~AW~~~~~~ 139 (152)
T 3pt8_A 119 MED-----------HNHMVGGAKDAWEVFVGF 139 (152)
T ss_dssp HHH-----------TTCCCTTHHHHHHHHHHH
T ss_pred HHH-----------cCcCCHHHHHHHHHHHHH
Confidence 764 345777766655555443
No 45
>2w72_C Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7s_A* 1qi8_A* 1j7y_A* 1o1i_A* 2w72_A* 1bzz_A* 1c7b_A* 1j7w_A* 1o1k_A* 1o1o_A* 1y0c_A* 1ydz_A* 3ia3_B* 1ird_A* 1a00_A* 1a0u_A* 1a0z_A* 1a3n_A* 1a9w_A* 1b86_A* ...
Probab=52.46 E-value=38 Score=22.21 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=55.3
Q ss_pred hhhHHhhhcCCHHHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchh
Q psy13775 12 AGYHYSNFTARIGLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 86 (119)
Q Consensus 12 ~~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~ 86 (119)
....|++|.-..++...-.||++++..| ..-.+-+.-.++.-..+. --.|+++....+...|+..|....
T Consensus 39 ~~~~F~~~d~~~~~~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~----~~gV~p~~f~~~~~~Ll~~l~~~l- 113 (141)
T 2w72_C 39 TKTYFPHFDLSHGSAQVKGQGKKVADALTNAVAHVDDMPNALSALSDLHAH----KLRVDPVNFKLLSHCLLVTLAAHL- 113 (141)
T ss_dssp GGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTTSHHHHTHHHHHHHHH----TTCCCTHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhHH----hcCCCHHHHHHHHHHHHHHHHHHc-
Confidence 4568888822227788889999999888 222221122222222222 136888999998888888886431
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 87 GLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 87 ~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..++++..+.-.++.....
T Consensus 114 --------g~~~t~e~~~AW~~~~~~i~ 133 (141)
T 2w72_C 114 --------PAEFTPAVHASLDKFLASVS 133 (141)
T ss_dssp --------TTTCCHHHHHHHHHHHHHHH
T ss_pred --------cccCCHHHHHHHHHHHHHHH
Confidence 34588887776666655443
No 46
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=51.93 E-value=31 Score=22.95 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=57.9
Q ss_pred hhhHHhhhcCCH---HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHh
Q psy13775 12 AGYHYSNFTARI---GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKS 83 (119)
Q Consensus 12 ~~~~Fs~Fgsdl---~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~ 83 (119)
....|++|+... ...+.-.||++++..| .--.|=.+. ..+-=.+-.+.- -.|+++....+...|+..|..
T Consensus 48 ~k~~F~~~~d~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~-~~l~~L~~~H~~-~gV~p~~f~~~~~~ll~~l~~ 125 (150)
T 1sct_A 48 TKTYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDSLDDPSRLK-CVVEKFAVNHIN-RKISGDAFGAIVEPMKETLKA 125 (150)
T ss_dssp GGGGGCTTCCGGGGGGSHHHHHHHHHHHHHHHHHHHTTTCHHHHH-HHHHHHHHHHHH-TTCCHHHHGGGHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHH
Confidence 446888887543 6777788999999888 323321121 122222333333 378999999999999988864
Q ss_pred chhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 84 SERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 84 ~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.. +..+|++..+.-.+++..+
T Consensus 126 ~l---------g~~~t~e~~~AW~k~~~~v 146 (150)
T 1sct_A 126 RM---------GNYYSDDVAGAWAALVGVV 146 (150)
T ss_dssp HH---------GGGCCHHHHHHHHHHHHHH
T ss_pred Hh---------cccCCHHHHHHHHHHHHHH
Confidence 32 3348888777776666554
No 47
>1yhu_A Hemoglobin A1 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=50.98 E-value=51 Score=21.83 Aligned_cols=92 Identities=10% Similarity=-0.009 Sum_probs=59.0
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchh
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 86 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~ 86 (119)
.-..|++|+... ++.+.-.||.|++..| ....=++.-.-.+-=.+-.+-- -.|+++....+...|+..|....
T Consensus 42 ~k~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~-~gV~p~~f~~~~~~ll~~l~~~l- 119 (145)
T 1yhu_A 42 ARDIFESVNSKDMASPEFKAHIARVLGGLDRVISMLDNQATLDADLAHLKSQHDP-RTIDPVNFVVFRKALIATVAGTF- 119 (145)
T ss_dssp GGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHGG-GCCCTHHHHHHHHHHHHHHHHHH-
T ss_pred HHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHc-
Confidence 456899998544 7788889999999888 2222111111122223334444 37999999999999999886432
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 87 GLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 87 ~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+..+|++.+.++...+...
T Consensus 120 --------g~~~t~~AW~~~~~~va~~ 138 (145)
T 1yhu_A 120 --------GVCFDVPAWQGCYNIIAKG 138 (145)
T ss_dssp --------CTTCCHHHHHHHHHHHHHH
T ss_pred --------cccCCHHHHHHHHHHHHHH
Confidence 3457776666666665544
No 48
>2aa1_B Hemoglobin beta-C chain; ROOT effect, cooperativity, antarctic FISH, oxygen storage/transport complex; HET: HEM; 1.80A {Trematomus newnesi} SCOP: a.1.1.2 PDB: 1xq5_B* 3bj1_B* 3bj2_B* 3bj3_B*
Probab=49.27 E-value=55 Score=21.72 Aligned_cols=90 Identities=8% Similarity=0.017 Sum_probs=57.4
Q ss_pred hhhHHhhhcCC--H----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR--I----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd--l----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++||.. + ...+.-.||.+++..| .--...+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~~----~~V~p~~f~~~~~~Ll~~ 113 (146)
T 2aa1_B 38 TQRYFGKFGNLYNAAAIAQNAMVSKHGTTILNGLDRAVKNMDDITNTYAELSVLHSEK----LHVDPDNFKLLADCLTIV 113 (146)
T ss_dssp GGGGCGGGCCCSSHHHHHHCHHHHHHHHHHHHTTHHHHHCTTCHHHHHHHHHHHHHHT----SCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHhHh----cCCCHHHHHHHHHHHHHH
Confidence 44689999633 2 6788889999999888 2222222222233333322 368899999999999998
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
|.... +..+|++..+.-.+++..+.
T Consensus 114 l~~~l---------g~~~t~e~~~AW~k~~~~va 138 (146)
T 2aa1_B 114 VAARF---------GSAFTGEVQAAFQKFMAVVV 138 (146)
T ss_dssp HHHHH---------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHc---------cccCCHHHHHHHHHHHHHHH
Confidence 86532 33488877766666655443
No 49
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=48.93 E-value=56 Score=21.73 Aligned_cols=92 Identities=8% Similarity=-0.079 Sum_probs=57.2
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
....|++|+... ...+...||.|++..| .--.|=.... .+-=.+-.+.-.-.|+++....+...|+..|....
T Consensus 50 ~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~-~l~~L~~~H~~~lgV~p~~f~~~~~~Ll~~l~~~l 128 (153)
T 1x9f_C 50 VNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDA-ALDHLAHQHEVREGVQKAHFKKFGEILATGLPQVL 128 (153)
T ss_dssp HHHHTGGGTGGGTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhcCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHc
Confidence 446888887555 7777789999988877 2222211111 11112223322237899999999999999886432
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+ .++++.+..+...+....
T Consensus 129 ---------g-~~t~~AW~~~~~~ia~~l 147 (153)
T 1x9f_C 129 ---------D-DYDALAWKSCLKGILTKI 147 (153)
T ss_dssp ---------S-CCCHHHHHHHHHHHHHHH
T ss_pred ---------C-CCCHHHHHHHHHHHHHHH
Confidence 3 567777776666665543
No 50
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=48.49 E-value=55 Score=21.85 Aligned_cols=90 Identities=9% Similarity=0.021 Sum_probs=56.7
Q ss_pred hhhHHhhhcCC----H-HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR----I-GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 12 ~~~~Fs~Fgsd----l-~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
.-..|++|+.. + .+.+.-.||+|++.-| ....=.+.-.-.+-=.+-.+-- -.|+.++...+-..|+..|.
T Consensus 43 ~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~-~~V~p~~f~~~~~~Ll~~l~ 121 (148)
T 2vyw_A 43 YISYFSKLQGLTKDNVGQSEGIRYYGRTLGEELIRLLKAASNPSVLEERIVQGAKDHKA-RPVTKDQFTGAAPIFIKFFQ 121 (148)
T ss_dssp GGGGSGGGTTCCTTTGGGCSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-SSCCHHHHHHTHHHHHHHHH
T ss_pred HHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence 44688888643 2 6667778999999888 2221111111122223334444 47999999999999998885
Q ss_pred hchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 83 SSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 83 ~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
.. .++++..+.-.++...+.
T Consensus 122 ~~------------~~t~e~~~AW~k~~~~va 141 (148)
T 2vyw_A 122 GL------------LKKQEDKDAIEKFLLHVM 141 (148)
T ss_dssp HH------------CCSHHHHHHHHHHHHHHH
T ss_pred Hc------------CCCHHHHHHHHHHHHHHH
Confidence 42 478887777766665543
No 51
>1x9f_A Globin IV, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_A*
Probab=47.97 E-value=59 Score=21.67 Aligned_cols=92 Identities=4% Similarity=-0.124 Sum_probs=56.6
Q ss_pred hhhHHhhhcCCH-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 12 AGYHYSNFTARI-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
.-..|++|+... ...+.-.||.|++..| .--.|=.+.. .+-=.+-.+----.|+++....+...|+..|...
T Consensus 49 ~k~~F~~~~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~-~l~~L~~~H~~~lgV~p~~f~~~~~~ll~~l~~~- 126 (151)
T 1x9f_A 49 SKALFERVKIDEPESGEFKSHLVRVANGLKLLINLLDDTLVLQS-HLGHLADQHIQRKGVTKEYFRGIGEAFARVLPQV- 126 (151)
T ss_dssp GGGGGTTTTTTSTTSSHHHHHHHHHHHHHHHHHTTTTCHHHHHH-HHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHH-
T ss_pred HHHhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH-
Confidence 456899987444 6777888999999888 2222211111 1111222222212789999999999999988643
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
-+ .++++.+.++...+....
T Consensus 127 --------lg-~~t~eAW~k~~~~va~~l 146 (151)
T 1x9f_A 127 --------LS-CFNVDAWNRCFHRLVARI 146 (151)
T ss_dssp --------CS-SCCHHHHHHHHHHHHHHH
T ss_pred --------cC-CCCHHHHHHHHHHHHHHH
Confidence 13 578877777666665543
No 52
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=47.15 E-value=7.9 Score=24.49 Aligned_cols=53 Identities=11% Similarity=0.194 Sum_probs=40.5
Q ss_pred CCCChhhHHHHHHHHHHHHHhchhHH----------HHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q psy13775 63 DKLDPAKITTFEKEFLAHIKSSERGL----------LESIKKEGKITEDTDAKLKTVVTNFLAN 116 (119)
Q Consensus 63 d~ipv~~I~~fe~~ll~~l~~~~~~~----------~~~I~~~~~l~~~~~~~L~~~i~~~~~~ 116 (119)
..+|...+..++.++.+.+...+|+. .+.++-.+ .+++.++.+.+++++..++
T Consensus 11 ~~lp~ga~~aL~~EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g-~~k~dKe~i~eiLqE~we~ 73 (81)
T 1ghh_A 11 SPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIG-ATKEDKQRISEILQETWES 73 (81)
T ss_dssp SCCCTTHHHHHHHHHHHHHHHHCSSSCCEEEEEEESSCEEEEES-CCHHHHHHHHHHHHHHHHT
T ss_pred CCCChhHHHHHHHHHHHHHHhhCCCCCceEEEeecCCCceeecC-CChhHHHHHHHHHHHHHhC
Confidence 47899999999999999999999996 33333233 3466788888888887553
No 53
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=46.90 E-value=38 Score=22.63 Aligned_cols=92 Identities=13% Similarity=0.010 Sum_probs=54.4
Q ss_pred hhhHHhhhcCCH---HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI---GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl---~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
....|++|+... ...+...||.+++..| ....-...-.-.+--.+-.+ .--.|+++....+...|+..|...
T Consensus 50 ~k~~F~~f~~~~~~~~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H-~~~gV~p~~f~~~~~~Ll~~l~~~ 128 (152)
T 4hrt_B 50 AKGKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAVNH-INRQISADEFGEIVGPLRQTLKAR 128 (152)
T ss_dssp HHHHTGGGCCCC---CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-HC-CCCHHHHGGGHHHHHHHHHHH
T ss_pred HHHhhHHhCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-hhCCCCHHHHHHHHHHHHHHHHHH
Confidence 345788886443 3566678888988888 22221111222222233334 333788888888888888887653
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
. +..+|++..+.-.++....
T Consensus 129 l---------g~~~t~e~~~AW~k~~~~v 148 (152)
T 4hrt_B 129 M---------GNYFDEDTVAAWASLVAVV 148 (152)
T ss_dssp H---------GGGCCHHHHHHHHHHHHHH
T ss_pred h---------cccCCHHHHHHHHHHHHHH
Confidence 1 3347888776666665543
No 54
>3d1k_B Hemoglobin subunit beta-1/2; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 1t1n_B* 1la6_B* 3nfe_B* 3ng6_B* 2h8f_B* 1pbx_B* 1s5x_B* 1s5y_B* 1hbh_B* 2h8d_B* 2peg_B* 3gkv_B* 3gqg_B*
Probab=45.35 E-value=58 Score=21.57 Aligned_cols=89 Identities=8% Similarity=0.033 Sum_probs=55.9
Q ss_pred hhhHHhhhcCCH------HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI------GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsdl------~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++|+... ...+.-.||.+++..| .--..-+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~~----~~V~p~~f~~~~~~ll~~ 113 (146)
T 3d1k_B 38 TQRYFSGFGNLYNAEGIMSNANVAAHGIKVLHGLDRGMKNMDNIADAYTDLSTLHSEK----LHVDPDNFKLLSDCITIV 113 (146)
T ss_dssp GGGGGTTSSCCSSHHHHHHCHHHHHHHHHHHHHTHHHHHTGGGHHHHTHHHHHHHHHT----TCCCTHHHHHHHHHHHHH
T ss_pred HHHHhcccccCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 456899985432 6678889999999888 2111111222222233321 368899999999999998
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
|.... +..+|++..+.-.+++..+
T Consensus 114 l~~~l---------g~~~t~e~~~AW~k~~~~v 137 (146)
T 3d1k_B 114 LAAKM---------GHAFTAETQGAFQKFLAAV 137 (146)
T ss_dssp HHHHH---------GGGSCHHHHHHHHHHHHHH
T ss_pred HHHHh---------cccCCHHHHHHHHHHHHHH
Confidence 86432 3347887766666665544
No 55
>1wmu_A Hemoglobin D alpha chain; hemoglobin D, reptilia, the aldabra giant tortoise, geochelone gigantea, oxygen storage/transport complex; HET: HEM; 1.65A {Dipsochelys dussumieri} SCOP: a.1.1.2 PDB: 1v75_A* 2z6n_A* 1hbr_A*
Probab=44.51 E-value=56 Score=21.36 Aligned_cols=90 Identities=8% Similarity=0.028 Sum_probs=54.7
Q ss_pred hhhHHhhhcCCHHHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchh
Q psy13775 12 AGYHYSNFTARIGLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 86 (119)
Q Consensus 12 ~~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~ 86 (119)
....|++|.-..++.+.-.||.+++..| .--.+-+.-.++.-..+. --.|+++....+...|+..|....
T Consensus 39 ~k~~F~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~ll~~l~~~l- 113 (141)
T 1wmu_A 39 TKTYFPHFDLHHDSEQIRHHGKKVVGALGDAVKHIDNLSATLSELSNLHAY----NLRVDPVNFKLLSHCFQVVLGAHL- 113 (141)
T ss_dssp GGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTTSHHHHTHHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH----HhCCCHHHHHHHHHHHHHHHHHHc-
Confidence 4467888822226677778899998888 222211122222222222 236889999999999998886532
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 87 GLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 87 ~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
+..+|++..+.-.+++..+.
T Consensus 114 --------g~~~t~e~~~AW~~~~~~v~ 133 (141)
T 1wmu_A 114 --------GREYTPQVQVAYDKFLAAVS 133 (141)
T ss_dssp --------GGGCCHHHHHHHHHHHHHHH
T ss_pred --------cccCCHHHHHHHHHHHHHHH
Confidence 33488877666666655543
No 56
>2r80_B Hemoglobin subunit beta; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3dhr_B* 3mju_B* 1faw_B* 3k8b_B* 2qmb_B* 3eok_B* 1a4f_B* 1c40_B* 1hv4_B* 2zfb_B* 3mjp_B* 1hbr_B* 3fs4_B* 3a59_B* 1wmu_B* 1v75_B* 2z6n_B* 3at5_B* 3at6_B*
Probab=44.05 E-value=66 Score=21.18 Aligned_cols=90 Identities=12% Similarity=0.131 Sum_probs=57.4
Q ss_pred hhhHHhhhcCC-----H-HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR-----I-GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd-----l-~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
....|++|+.. + ...+.-.||.+++..| .--.+-+.-.++.-..+. .-.|+++....+...++..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~n~~~~~h~~~v~~~l~~~v~~ld~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~ll~~ 113 (146)
T 2r80_B 38 TQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCD----KLHVDPENFRLLGDILVII 113 (146)
T ss_dssp GGGGGGGGCCCSSHHHHHHCHHHHHHHHHHHHHHHHHHHTTTCHHHHTHHHHHHHHH----TSCCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH----HcCCCHHHHHHHHHHHHHH
Confidence 45789999543 2 6788888999999888 222211122222222332 2468899999999999998
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
|.... +..+|++..+.-.+++..+.
T Consensus 114 l~~~l---------g~~~t~e~~~AW~~~~~~va 138 (146)
T 2r80_B 114 LAAHF---------GKDFTPECQAAWQKLVRVVA 138 (146)
T ss_dssp HHHHH---------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHc---------cccCCHHHHHHHHHHHHHHH
Confidence 86432 33478877776666665544
No 57
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=43.95 E-value=68 Score=21.25 Aligned_cols=90 Identities=8% Similarity=0.004 Sum_probs=57.9
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCC---CCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQY---VPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFL 78 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~---~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll 78 (119)
.-..|++|+... ++.+.-.||.+++..| .-- .|-... -.+-=.+-.+-- -.|+.++...+...|+
T Consensus 38 ~k~~F~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~-~~l~~L~~~H~~-~~V~p~~f~~~~~~Ll 115 (151)
T 2c0k_A 38 NLNHFPWFKEIPFDDLPENARFKTHGTRILRQVDEGVKALSVDFGDKKFD-DVWKKLAQTHHE-KKVERRSYNELKDIII 115 (151)
T ss_dssp GGGGCHHHHTSCGGGGGGCHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHH-HHHHHHHHHHTT-SCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHH-HHHHHHHHHHhh-CCCCHHHHHHHHHHHH
Confidence 446899985332 6677788999999977 222 332222 222223344444 5799999999999999
Q ss_pred HHHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 79 AHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 79 ~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
.+|... -+ +|++..+.-.+++..+.
T Consensus 116 ~~l~~~----------lg-~t~e~~~AW~k~~~~va 140 (151)
T 2c0k_A 116 EVVCSC----------VK-LNEKQVHAYHKFFDRAY 140 (151)
T ss_dssp HHHHHH----------SC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHH----------cC-CCHHHHHHHHHHHHHHH
Confidence 988643 12 78877666666655443
No 58
>2r80_A Hemoglobin subunit alpha-A; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3mju_A* 3dhr_A* 3mjp_A* 1faw_A* 3eok_A* 3k8b_A* 2qmb_A* 3fs4_A* 3a59_A* 1a4f_A* 1hv4_A* 2zfb_A* 1c40_A* 3at5_A* 3at6_A*
Probab=43.23 E-value=58 Score=21.41 Aligned_cols=88 Identities=13% Similarity=0.119 Sum_probs=54.1
Q ss_pred hhhHHhhhcCCH--HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI--GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
.-..|++| |+ ++.+.-.||++++..| ..-.+ +-.+-=.+-.+.---.|+++...-+-..|+..|...
T Consensus 39 ~k~~F~~~--~~~~~s~~~~~h~~~v~~al~~~v~~ld~l----~~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~~~ 112 (141)
T 2r80_A 39 TKTYFPHF--DLSHGSAQIKGHGKKVAEALVEAANHIDDI----AGALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVAVH 112 (141)
T ss_dssp GGGGCTTS--CCSTTCHHHHHHHHHHHHHHHHHHHTTTCH----HHHTHHHHHHHHTTSCCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhhhhH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 34678888 44 6667778899988887 22221 111122222232223688888888888888887643
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
. +..+|++..+.-.+++....
T Consensus 113 l---------g~~~t~e~~~AW~~~~~~va 133 (141)
T 2r80_A 113 F---------PSLLTPEVHASLDKFVLAVG 133 (141)
T ss_dssp C---------TTTCCHHHHHHHHHHHHHHH
T ss_pred c---------cccCCHHHHHHHHHHHHHHH
Confidence 2 44588887777666665543
No 59
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} SCOP: a.1.1.2 PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 3uhg_A* 3uhs_A* 3uhk_A* 3uhi_A* 3uhn_A* 3ugy_A* 2auo_A* 2aup_A* 3uhr_A* 3uh5_A* 3uh3_A* ...
Probab=43.02 E-value=61 Score=21.39 Aligned_cols=88 Identities=11% Similarity=-0.061 Sum_probs=50.6
Q ss_pred hhHHhhhcCCH---HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhch
Q psy13775 13 GYHYSNFTARI---GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSE 85 (119)
Q Consensus 13 ~~~Fs~Fgsdl---~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~ 85 (119)
-..|++|+... +..+.-.||++++..| ....-...-.-.+--.+-.+. --.|+++...-+...|+..|...
T Consensus 48 k~~F~~~~~~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~l~~~H~-~~~V~p~~f~~~~~~ll~~l~~~- 125 (146)
T 3g46_A 48 IGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHI-TRKISAAEFGKINGPIKKVLASK- 125 (146)
T ss_dssp GGGGGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-HTTCCHHHHGGGHHHHHHHHHHT-
T ss_pred HHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHc-
Confidence 45888886433 3466778899988777 222211111111222222222 23577888777777777776532
Q ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 86 RGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 86 ~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.+|++..+.-.+++...
T Consensus 126 -----------~~t~e~~~AW~k~~~~v 142 (146)
T 3g46_A 126 -----------NFGDKYANAWAKLVAVV 142 (146)
T ss_dssp -----------TCCHHHHHHHHHHHHHH
T ss_pred -----------CCCHHHHHHHHHHHHHH
Confidence 58888776666665543
No 60
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=42.95 E-value=42 Score=22.06 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=53.3
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCCCC---CCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQYVP---MAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFL 78 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~~P---lsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll 78 (119)
....|++|+... ...+.-.||.|++..| .--.| .+.-.++.-..+ . -.|+++....+...|+
T Consensus 40 ~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~-~----~gV~p~~f~~~~~~ll 114 (147)
T 1mba_A 40 SANFFADFKGKSVADIKASPKLRDVSSRIFTRLNEFVNNAANAGKMSAMLSQFAKEHV-G----FGVGSAQFENVRSMFP 114 (147)
T ss_dssp GGGGCTTTTTCCHHHHHTCTTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-H----TTCCHHHHHHHHHHHH
T ss_pred HHHhhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh-c----CCCCHHHHHHHHHHHH
Confidence 446788886542 3445667888888877 33333 233333444444 2 3578999999999888
Q ss_pred HHHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 79 AHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 79 ~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
..|... ..+|++..+.-.+++..+
T Consensus 115 ~~l~~~-----------~~~t~e~~~AW~~~~~~v 138 (147)
T 1mba_A 115 GFVASV-----------AAPPAGADAAWTKLFGLI 138 (147)
T ss_dssp HHHHTT-----------SCCCTTHHHHHHHHHHHH
T ss_pred HHHHHh-----------cCCCHHHHHHHHHHHHHH
Confidence 888642 447776666555555444
No 61
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=41.88 E-value=78 Score=22.08 Aligned_cols=92 Identities=11% Similarity=0.037 Sum_probs=54.9
Q ss_pred hhhHHhhhcCC-----H-HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR-----I-GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 12 ~~~~Fs~Fgsd-----l-~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
....|.+|+.. + ...+.-.||.+++..| ....-...-...+-=.+-.+..--.|..+....+...|+..|
T Consensus 59 ~k~~F~~f~d~~~~~~l~~n~~~~~h~~~v~~al~~~v~~Ldd~~~l~~~l~~L~~~H~~~~gV~p~~f~~~~~~Ll~~l 138 (193)
T 2dc3_A 59 AKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGKAHALKHKVEPVYFKILSGVILEVV 138 (193)
T ss_dssp GGGGCTTTTTCCCHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 45688888543 2 6777788999999888 222211111112222233332234689999999999999988
Q ss_pred HhchhHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy13775 82 KSSERGLLESIKKEGKITEDTDAKLKTVVTN 112 (119)
Q Consensus 82 ~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~ 112 (119)
.... +..++++..+.-.+++..
T Consensus 139 ~~~l---------g~~~t~e~~~AW~k~~~~ 160 (193)
T 2dc3_A 139 AEEF---------ASDFPPETQRAWAKLRGL 160 (193)
T ss_dssp HHHT---------GGGCCHHHHHHHHHHHHH
T ss_pred HHHh---------hccCCHHHHHHHHHHHHH
Confidence 6542 234777755555554443
No 62
>1gcv_B Hemoglobin; oxygen storage/transport complex; HET: HEM; 2.00A {Mustelus griseus} SCOP: a.1.1.2 PDB: 1gcw_B*
Probab=41.41 E-value=64 Score=21.29 Aligned_cols=85 Identities=6% Similarity=-0.021 Sum_probs=50.8
Q ss_pred hhhHHhhhcCCHHHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchh
Q psy13775 12 AGYHYSNFTARIGLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 86 (119)
Q Consensus 12 ~~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~ 86 (119)
.-..|++|| |+.+- .||+|++..| ..-..-+.-.++.-..+.+ -.|++++-+-+-..++..|....
T Consensus 38 ~k~~F~~f~-d~~~~---~h~~~v~~al~~~v~~ld~l~~~l~~L~~~H~~k----~~V~p~~f~~~~~~Ll~~l~~~l- 108 (136)
T 1gcv_B 38 TNRYFQKRT-DFRSS---IHAGIVVGALQDAVKHMDDVKTLFKDLSKKHADD----LHVDPGSFHLLTDCIIVELAYLR- 108 (136)
T ss_dssp GGGGTTTCT-TCCHH---HHHHHHHHHHHHHHHTTTCHHHHTHHHHHHHHHT----TCCCGGGHHHHHHHHHHHHHHHH-
T ss_pred HHHHhhccc-CCCcc---HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHhHHh----hCCCHHHHHHHHHHHHHHHHHHc-
Confidence 346888887 44111 8899998887 2222111122222233322 36888998888888888876432
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 87 GLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 87 ~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+..++++..+...+++...
T Consensus 109 --------g~~~t~e~~~AW~k~~~~v 127 (136)
T 1gcv_B 109 --------KDCFTPHIQGIWDKFFEVV 127 (136)
T ss_dssp --------GGGSCHHHHHHHHHHHHHH
T ss_pred --------ccCCCHHHHHHHHHHHHHH
Confidence 3348887776666665544
No 63
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=41.19 E-value=44 Score=22.30 Aligned_cols=91 Identities=7% Similarity=-0.031 Sum_probs=56.9
Q ss_pred hhHHhhhcCCH------HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 13 GYHYSNFTARI------GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 13 ~~~Fs~Fgsdl------~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
...|.+|+... ...+...||.+++..| ....-++.-...+--.+-.+.- -.|+++....+...++..+.
T Consensus 47 k~~F~~~~~~~~~~~l~~~~~~~~H~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~H~~-~gV~p~~f~~~~~~Ll~~l~ 125 (154)
T 4b4y_A 47 FQIFPWADASKTAKEMRSHPRFKSHAKSIGKVISDCLVDLNGVKKHEPKLSSLGAMHTK-KKVPTELFGKLGGCILTQVV 125 (154)
T ss_dssp HHHSTTCCTTSCHHHHTTSHHHHHHHHHHHHHHHHHHTTGGGGGGGHHHHGGGGGGSCT-TTSCTHHHHHHHHHHHHHHH
T ss_pred HHHhHHhcCCCcHHHHHcCHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHcc-CCCChHHHHHHHHHHHHHHH
Confidence 46788875431 4556778899988888 3332222222222233344444 57899999999999999886
Q ss_pred hchhHHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q psy13775 83 SSERGLLESIKKE-GKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 83 ~~~~~~~~~I~~~-~~l~~~~~~~L~~~i~~~ 113 (119)
... + ..+|++..+.-.++...+
T Consensus 126 ~~l---------g~~~~t~e~~~AW~~~~~~v 148 (154)
T 4b4y_A 126 KRV---------SEAKWSEEKKEAWLKAYGII 148 (154)
T ss_dssp HHS---------CTTTCCHHHHHHHHHHHHHH
T ss_pred HHc---------CCCCCCHHHHHHHHHHHHHH
Confidence 532 3 568888777666665544
No 64
>3mkb_A Hemoglobin subunit alpha; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2 PDB: 1gcv_A* 1gcw_A*
Probab=40.88 E-value=35 Score=22.81 Aligned_cols=90 Identities=7% Similarity=0.045 Sum_probs=54.5
Q ss_pred hhHHhhhcCCH--HHHHHHhcccchhhhc-CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhHHH
Q psy13775 13 GYHYSNFTARI--GLNKSLMLSRRLPILL-GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLL 89 (119)
Q Consensus 13 ~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL-~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~~~ 89 (119)
-..|++| |+ ++.+.-.||.|++.-| .--..+.--+-.+-=.+-.+..=-.|+++.-+-+-..|+..|...
T Consensus 40 k~~F~~~--~~~~~s~~~~aHg~~v~~al~~~v~~ld~l~~~l~~L~~~H~~~l~V~p~~f~~l~~~Ll~~l~~~----- 112 (140)
T 3mkb_A 40 KSYFDYA--DYSAAGAKVQLHGGKVIRAVVSAAEHDDDLHAHLMVLAVTHGKKLLVDPSNFPMLSECILVTLATH----- 112 (140)
T ss_dssp GGGCCCS--CCSTTCHHHHHHHHHHHHHHHHHHTTTTTHHHHTHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH-----
T ss_pred HhhCccc--cCCCCCHHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH-----
Confidence 4588888 55 7788889999998888 111111111222222233333223678888888888888877543
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 90 ESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 90 ~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
-+ .+|++..+...+++....
T Consensus 113 ----lg-~ft~ev~~AW~k~~~~va 132 (140)
T 3mkb_A 113 ----LA-EFSPATHCAVDKLLSAIS 132 (140)
T ss_dssp ----CS-CCCHHHHHHHHHHHHHHH
T ss_pred ----cC-cCCHHHHHHHHHHHHHHH
Confidence 14 688887776666655443
No 65
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=39.93 E-value=31 Score=23.01 Aligned_cols=93 Identities=9% Similarity=0.109 Sum_probs=57.3
Q ss_pred hhhHHhhhcCC----H-HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR----I-GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 12 ~~~~Fs~Fgsd----l-~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~ 82 (119)
....|.+|+.. + ...+.-.||.+++..| ..+.- +.-...+-=.+-.+.- -.|+.+....+...|+..|.
T Consensus 50 ~~~~F~~~~d~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~-~~l~~~l~~L~~~H~~-~gV~p~~f~~~~~~Ll~~l~ 127 (159)
T 1hlm_A 50 AQRKFPQMAGLSPAELRTSRQMHAHAIRVSALMTTYIDEMDT-EVLPELLATLTRTHDK-NHVGKKNYDLFGKVLMEAIK 127 (159)
T ss_dssp TTTSSTTTTTSCSTTCSCCHHHHHHHHHHHHHHHHHHHTTTS-TTHHHHHHHHHHHHHH-HTCCHHHHHHHHHHHHHHTT
T ss_pred HHHhcccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHH
Confidence 34578888543 2 6677888899988888 33332 2222222222222222 26889999999888888886
Q ss_pred hchhHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy13775 83 SSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 115 (119)
Q Consensus 83 ~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~~ 115 (119)
... +..++++..+.-.+++..+..
T Consensus 128 ~~l---------g~~~t~e~~~AW~~~~~~v~~ 151 (159)
T 1hlm_A 128 AEL---------GVGFTKQVHDAWAKTFAIVQG 151 (159)
T ss_dssp SSC---------SSCCCTTHHHHHHHHHHHHGG
T ss_pred HHh---------cccCCHHHHHHHHHHHHHHHH
Confidence 542 345788777777766665543
No 66
>3pt8_B Hemoglobin III; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} PDB: 3pt7_B*
Probab=39.71 E-value=79 Score=20.79 Aligned_cols=90 Identities=4% Similarity=-0.091 Sum_probs=55.4
Q ss_pred hhhHHhh-hcCCH-----HHHHHHhcccchhhhc----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 12 AGYHYSN-FTARI-----GLNKSLMLSRRLPILL----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 12 ~~~~Fs~-Fgsdl-----~tr~~L~rG~Rl~ElL----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
...+|++ |+... .....-.||.+++..| ....-...-...+-=.+-.+. --.|.++....+...++..+
T Consensus 41 ~k~~F~~~f~~~~~~~l~~n~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~-~~gV~p~~f~~~~~~ll~~l 119 (152)
T 3pt8_B 41 TLTPFKSLFQNVSFNQMTNHPTMKAQSLVFCNGMSSFVDNLDDHEVLVVLLQKMAKLHF-NRGIRIKELRDGYGTLLRYL 119 (152)
T ss_dssp GGGGGTTTTTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 3568888 87654 5667888999999888 322211111122222222332 22789999999999999988
Q ss_pred HhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 82 KSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 82 ~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.... + ++++..+.-.+++..+
T Consensus 120 ~~~l----------g-~t~e~~~AW~~~~~~v 140 (152)
T 3pt8_B 120 EDHC----------H-VEGSTKNAWEDFIAYI 140 (152)
T ss_dssp HHTT----------S-CCHHHHHHHHHHHHHH
T ss_pred HHHc----------C-CCHHHHHHHHHHHHHH
Confidence 7531 2 7777666655555443
No 67
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=38.65 E-value=36 Score=18.27 Aligned_cols=20 Identities=10% Similarity=0.225 Sum_probs=17.9
Q ss_pred CCCChhhHHHHHHHHHHHHH
Q psy13775 63 DKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 63 d~ipv~~I~~fe~~ll~~l~ 82 (119)
|+-++|++.+|-+.+..|+.
T Consensus 10 ~dA~~Eela~Y~~~LrhYiN 29 (36)
T 2bf9_A 10 DDAPVEDLIRFYNDLQQYLN 29 (36)
T ss_dssp TTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 67899999999999999985
No 68
>1a6m_A Myoglobin; heme protein, model compounds, oxygen storage, ligand binding geometry, conformational substates, oxygen transpor; HET: HEM; 1.00A {Physeter catodon} SCOP: a.1.1.2 PDB: 1a6k_A* 1a6n_A* 2jho_A* 1ufp_A* 2eb9_A* 2eb8_A* 2w6w_A* 2ekt_A* 105m_A* 104m_A* 1ajh_A* 1ajg_A* 1bvc_A* 1bvd_A* 1bz6_A* 1bzr_A* 1cq2_A* 1duk_A* 1ebc_A* 1hjt_A* ...
Probab=38.20 E-value=79 Score=20.95 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=55.6
Q ss_pred hhhHHhhhcCC--H----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR--I----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd--l----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++|+.. . ...+.-.||.|++..| .--.|-+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 39 ~k~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~~~~~l~~L~~~H~~~----~~V~p~~f~~~~~~Ll~~ 114 (151)
T 1a6m_A 39 TLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATK----HKIPIKYLEFISEAIIHV 114 (151)
T ss_dssp HHTTCTTTTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHH
T ss_pred HHHHhHhhcCCCcHHHhcCCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhc----cCCCHHHHHHHHHHHHHH
Confidence 34578888632 1 5666778999999888 2223323333444444432 358899999999999988
Q ss_pred HHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
|.... +..+|++..+.-.+++..+
T Consensus 115 l~~~l---------g~~~t~e~~~AW~k~~~~v 138 (151)
T 1a6m_A 115 LHSRH---------PGDFGADAQGAMNKALELF 138 (151)
T ss_dssp HHHHC---------GGGCSHHHHHHHHHHHHHH
T ss_pred HHHHc---------cccCCHHHHHHHHHHHHHH
Confidence 86542 2347777666655555443
No 69
>3lb2_A Dehaloperoxidase A; globin, oxidoreductase; HET: HEM; 1.06A {Amphitrite ornata} SCOP: a.1.1.2 PDB: 1ewa_A* 1ew6_A* 2qfk_A* 3kun_A* 3lb1_A* 3dr9_A* 3lb3_A* 3lb4_A* 3mou_A* 3ord_A* 3mym_A* 3k3u_A* 3o7n_A* 3kuo_A* 2qfn_A* 3myn_A* 3oj1_A* 3ok5_A* 3ixf_A*
Probab=37.25 E-value=89 Score=20.68 Aligned_cols=90 Identities=6% Similarity=0.107 Sum_probs=56.2
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
.-..|++|+... .+.+.-.||.|++..| .--.|-.+...+.-| +..+-. ..|+.+.-..+...|+.+|
T Consensus 31 tk~~F~~f~~~s~~~l~~n~~~~aHg~kV~~al~~~v~~ldd~~~l~~~l~~L-~~~H~~-~gV~p~~F~~l~~~ll~~L 108 (137)
T 3lb2_A 31 ERRYFKNYVGKSDQELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDANTL-VQMKQH-SSLTTGNFEKLFVALVEYM 108 (137)
T ss_dssp GGGGCTTTTTCCCC-CTTSHHHHHHHHHHHHHHHHHHHHCBTTBCCHHHHHHH-HHCGGG-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHcCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence 467899997543 4688899999999988 333333333333332 222322 2499999999999999999
Q ss_pred HhchhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 82 KSSERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 82 ~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.. +++ .-..+.++++...+...
T Consensus 109 ~~-~~~---------~e~~~AW~k~~~~v~~~ 130 (137)
T 3lb2_A 109 RA-SGQ---------SFDSQSWDRFGKNLVSA 130 (137)
T ss_dssp HH-CC-----------CCHHHHHHHHHHHHHH
T ss_pred HH-HCC---------HHHHHHHHHHHHHHHHH
Confidence 85 443 12345555555554443
No 70
>1n6j_G Calcineurin-binding protein cabin 1; MADS-BOX, protein-DNA complex, histone deacetylases, transcription/DNA complex; 2.20A {Homo sapiens}
Probab=37.15 E-value=19 Score=18.90 Aligned_cols=19 Identities=37% Similarity=0.629 Sum_probs=15.9
Q ss_pred HhcCCCCHHHHHHHHHHHH
Q psy13775 93 KKEGKITEDTDAKLKTVVT 111 (119)
Q Consensus 93 ~~~~~l~~~~~~~L~~~i~ 111 (119)
..++.++++.+..|+.+|-
T Consensus 4 sp~gsiseetkqklk~~il 22 (35)
T 1n6j_G 4 SPKGSISEETKQKLKSAIL 22 (35)
T ss_dssp CCSSCCCHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHH
Confidence 3567899999999999875
No 71
>1bba_A Bovine pancreatic polypeptide; pancreatic hormone; NMR {Bos taurus} SCOP: j.6.1.1 PDB: 1ljv_A 1tz5_A 1v1d_A
Probab=37.13 E-value=36 Score=18.26 Aligned_cols=20 Identities=20% Similarity=0.444 Sum_probs=17.9
Q ss_pred CCCChhhHHHHHHHHHHHHH
Q psy13775 63 DKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 63 d~ipv~~I~~fe~~ll~~l~ 82 (119)
|+-++|++.+|-+.+..|+.
T Consensus 10 ~dA~pEela~Y~~~Lr~YiN 29 (36)
T 1bba_A 10 DNATPEQMAQYAAELRRYIN 29 (36)
T ss_dssp SCSSTTHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 67899999999999999985
No 72
>3bom_B Hemoglobin subunit beta-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_B* 3bcq_B* 1spg_B*
Probab=37.08 E-value=66 Score=21.34 Aligned_cols=89 Identities=11% Similarity=0.054 Sum_probs=55.0
Q ss_pred hhhHHhhhcCC--H----HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHH
Q psy13775 12 AGYHYSNFTAR--I----GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 80 (119)
Q Consensus 12 ~~~~Fs~Fgsd--l----~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~ 80 (119)
.-..|++||.. + ++.+.-.||.+++..| .--...+.-.++.-..+.+ -.|+++....+...|+..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~lddl~~~l~~L~~~H~~~----~~V~p~~f~~~~~~Ll~~ 113 (147)
T 3bom_B 38 TQRHFSTFGNLSTPAAIMGNPAVAKHGKTVMHGLDRAVQNLDDIKNTYVTLSVMHSEK----LFVDPDNFRLLADCITVC 113 (147)
T ss_dssp GGGGCGGGSCCSSHHHHHTCHHHHHHHHHHHHHHHHHHHCTTCHHHHTHHHHHHHHHT----SCCCTHHHHHHHHHHHHH
T ss_pred HHHHccccccCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 45689999643 2 6678889999999888 2222112222222222222 368899999999999998
Q ss_pred HHhchhHHHHHHHhcCC-CCHHHHHHHHHHHHHH
Q psy13775 81 IKSSERGLLESIKKEGK-ITEDTDAKLKTVVTNF 113 (119)
Q Consensus 81 l~~~~~~~~~~I~~~~~-l~~~~~~~L~~~i~~~ 113 (119)
|....+ .. +|++..+.-.+++..+
T Consensus 114 l~~~lg---------~~~~t~e~~~AW~k~~~~v 138 (147)
T 3bom_B 114 VAAKLG---------PAVFSADTQEAFQKFLAVV 138 (147)
T ss_dssp HHHHHH---------HHHSCHHHHHHHHHHHHHH
T ss_pred HHHHcC---------cccCCHHHHHHHHHHHHHH
Confidence 865422 23 6777665555554443
No 73
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=36.36 E-value=90 Score=20.57 Aligned_cols=89 Identities=8% Similarity=0.008 Sum_probs=55.4
Q ss_pred hhhHHhhhcCCH-----HHHHHHhcccchhhhc-----CCC---CCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI-----GLNKSLMLSRRLPILL-----GQY---VPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFL 78 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-----~tr~~L~rG~Rl~ElL-----~q~---~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll 78 (119)
.-..|+ |++.. ...+.-.||.|++..| .-. .| +.-...+-=.+-.+--. .|+++....+...|+
T Consensus 38 ~k~~F~-~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~l~~~dd~-~~l~~~l~~L~~~H~~~-gV~p~~f~~~~~~Ll 114 (153)
T 2bk9_A 38 NLEKFP-FRDVPLEELSGNARFRAHAGRIIRVFDESIQVLGQDGDL-EKLDEIWTKIAVSHIPR-TVSKESYNQLKGVIL 114 (153)
T ss_dssp GGGGST-TTTSCGGGGGGCHHHHHHHHHHHHHHHHHHHHTTSTTHH-HHHHHHHHHHHHHHGGG-TCCHHHHHHHHHHHH
T ss_pred HHhcCc-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHccccCCH-HHHHHHHHHHHHHHhcc-CCCHHHHHHHHHHHH
Confidence 346787 76432 5677888999999976 221 22 11122222233344443 799999999999999
Q ss_pred HHHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 79 AHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 79 ~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
..|.... + +|++..+.-.+++..+.
T Consensus 115 ~~l~~~l----------g-~t~e~~~AW~~~~~~v~ 139 (153)
T 2bk9_A 115 DVLTAAS----------S-LDESQAATWAKLVDHVY 139 (153)
T ss_dssp HHHHHHT----------T-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHh----------C-CCHHHHHHHHHHHHHHH
Confidence 9886431 2 68777766666655543
No 74
>2w72_B Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7w_B* 1qi8_B* 1j7y_B* 1dxu_B* 1a0u_B* 1a0z_B* 1gli_B* 1j7s_B* 1o1l_B* 1o1n_B* 1y0t_B* 1y0w_B* 1o1o_B* 1ye2_B* 1y35_B* 1y22_B* 1ye0_B* 1dxt_B* 1y5f_B* 1ird_B* ...
Probab=35.73 E-value=93 Score=20.42 Aligned_cols=93 Identities=10% Similarity=0.098 Sum_probs=56.2
Q ss_pred hhhHHhhhcCC-----H-HHHHHHhcccchhhhc-CCC-CCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHh
Q psy13775 12 AGYHYSNFTAR-----I-GLNKSLMLSRRLPILL-GQY-VPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKS 83 (119)
Q Consensus 12 ~~~~Fs~Fgsd-----l-~tr~~L~rG~Rl~ElL-~q~-~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~ 83 (119)
....|++|+.. + +..+.-.||.+++..| .-- +.=.+... +-=.+-.+.---.|+++....+...|+..|..
T Consensus 38 ~k~~F~~f~~~~~~~~l~~n~~~~~h~~~v~~~l~~~v~~ld~l~~~-l~~L~~~H~~k~~V~p~~f~~~~~~Ll~~l~~ 116 (146)
T 2w72_B 38 TQRFFESFGDLSTPDAVMGNPKVKAQGKKVLGAFSDGLAHLDNLKGT-FATLSELHCDKLHVDPENFRLLGNVLVCVLAH 116 (146)
T ss_dssp GGGGCTTSCCCSSHHHHHHCHHHHHHHHHHHHHHHHHTTCTTCHHHH-HHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHH
T ss_pred HHHHhHhhcCCCcHHHHccCHHHHHHHHHHHHHHHHHHhCHHHHHHH-HHHHHHHhhhccCCChHHHHHHHHHHHHHHHH
Confidence 45689998642 2 7788889999999888 111 11112221 11122222212368899999999999988865
Q ss_pred chhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 84 SERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 84 ~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
.. +..+|++..+.-.+++..+.
T Consensus 117 ~l---------g~~~t~e~~~AW~~~~~~va 138 (146)
T 2w72_B 117 HF---------GKEFTPPVQAAYQKVVAGVA 138 (146)
T ss_dssp HH---------GGGSCHHHHHHHHHHHHHHH
T ss_pred Hc---------cccCCHHHHHHHHHHHHHHH
Confidence 32 33478877666666655443
No 75
>1b0b_A Hemoglobin; hemoprotein, sulfide carrier, globins, oxygen transport, oxygen storage/transport complex; HET: HEM; 1.43A {Lucina pectinata} SCOP: a.1.1.2 PDB: 1ebt_A* 1flp_A* 1moh_A*
Probab=35.38 E-value=82 Score=20.46 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=43.3
Q ss_pred hhHHhh-hcCC----H-HHHHHHhcccchhhhc----CC-CCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHH
Q psy13775 13 GYHYSN-FTAR----I-GLNKSLMLSRRLPILL----GQ-YVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHI 81 (119)
Q Consensus 13 ~~~Fs~-Fgsd----l-~tr~~L~rG~Rl~ElL----~q-~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l 81 (119)
...|++ |+.. + ...+.-.||.+++..| .. -.|=.+. -.+-=.+-.+.- -.|+++....+...|+.+|
T Consensus 40 ~~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~-~~l~~L~~~H~~-~~V~p~~f~~~~~~Ll~~l 117 (142)
T 1b0b_A 40 FAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALE-GQCKTFAANHKA-RGISAGQLEAAFKVLAGFM 117 (142)
T ss_dssp HHTTTTTTTTCCGGGCTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHH-HHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHG
T ss_pred HHHhHHhhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHH-HHHHHHHHhhhc-CCCCHHHHHHHHHHHHHHH
Confidence 457888 7643 2 5667778899998887 22 2221111 111112222322 2688999999999999988
Q ss_pred Hhchh
Q psy13775 82 KSSER 86 (119)
Q Consensus 82 ~~~~~ 86 (119)
....+
T Consensus 118 ~~~lg 122 (142)
T 1b0b_A 118 KSYGG 122 (142)
T ss_dssp GGGTC
T ss_pred HHHcC
Confidence 76543
No 76
>3mkb_B Hemoglobin subunit beta; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2
Probab=34.70 E-value=47 Score=22.15 Aligned_cols=84 Identities=8% Similarity=0.006 Sum_probs=47.4
Q ss_pred hhHHhhhcCCHHHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhchhH
Q psy13775 13 GYHYSNFTARIGLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERG 87 (119)
Q Consensus 13 ~~~Fs~Fgsdl~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~~~~ 87 (119)
-..|++|| |+.. -.||.|++.-| .--. .. -.+.-.+-.+..=-.|+++.-+-+-..++..|....
T Consensus 39 k~~F~~f~-dl~~---~~hg~kv~~al~~~v~~ldd---l~-~~l~~L~~~H~~~l~V~p~~f~~lg~~Ll~~l~~~l-- 108 (136)
T 3mkb_B 39 NAYFAKXX-XFSA---SIHAAIVVGALQDAVKHEDD---VK-AEFVNISKAHADKLHIDPGSFHLLTDSFIVELAHLK-- 108 (136)
T ss_dssp GGGTCC----CCH---HHHHHHHHHHHHHHHTTTTC---HH-HHSHHHHHHHHHTSCCCGGGHHHHHHHHHHHHHHHH--
T ss_pred hHHHHhhh-hhhh---HHHHHHHHHHHHHHHhccch---hh-hhhhhhhhhcccccccCCCceeeehhHHHHHHHHHH--
Confidence 45788886 5633 56888888777 1111 22 222222333332236888888888888888776542
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 88 LLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 88 ~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
+..++++..+...+++...
T Consensus 109 -------g~~ft~e~~~AW~k~~~~v 127 (136)
T 3mkb_B 109 -------KVAFTPFVFAVWIKFFQVV 127 (136)
T ss_dssp -------GGGSCHHHHHHHHHHHHHH
T ss_pred -------hhccchhHHHHHHHHHHHH
Confidence 3447887666665555443
No 77
>1c7c_A Protein (deoxyhemoglobin (alpha chain)); heme, oxygen delivery vehicle, blood substitute, oxygen storage/transport complex; HET: HEM; 1.80A {Homo sapiens} SCOP: a.1.1.2 a.1.1.2 PDB: 1aby_A* 1abw_A* 1o1p_A* 1c7d_A* 1o1j_A* 1o1l_A* 1o1n_A* 1o1m_A*
Probab=33.41 E-value=91 Score=22.98 Aligned_cols=88 Identities=10% Similarity=0.110 Sum_probs=55.6
Q ss_pred hhhHHhhhcCCH--HHHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHhc
Q psy13775 12 AGYHYSNFTARI--GLNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSS 84 (119)
Q Consensus 12 ~~~~Fs~Fgsdl--~tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~~ 84 (119)
....|++| |+ +..+.-.||++++..| .--.+-+.-.++.-..+. --.|+++....+...|+..|...
T Consensus 181 ~~~~F~~f--d~~~~n~~~~~h~~~v~~al~~~v~~lddl~~~l~~L~~~H~~----~~~V~p~~f~~~~~~ll~~l~~~ 254 (283)
T 1c7c_A 181 TKTYFPHF--DLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAH----KLRVDPVNFKLLSHCLLVTLAAH 254 (283)
T ss_dssp GGGGCTTS--CCSTTCHHHHHHHHHHHHHHHHHHHTTTSHHHHTHHHHHHHHH----TTCCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC--CCCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh----ccCCCHHHHHHHHHHHHHHHHHH
Confidence 45688888 45 7788889999998888 222211122222222322 13688899999998888888643
Q ss_pred hhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 85 ERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 85 ~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
. +..+|++..+.-.+++..+.
T Consensus 255 l---------g~~~t~e~~~AW~~~~~~va 275 (283)
T 1c7c_A 255 L---------PAEFTPAVHASLDKFLASVS 275 (283)
T ss_dssp C---------TTTCCHHHHHHHHHHHHHHH
T ss_pred c---------ccCCCHHHHHHHHHHHHHHH
Confidence 2 34588877766666655443
No 78
>1it2_A Hemoglobin; hagfish, deoxy form, oxygen storage/transport complex; HET: HEM; 1.60A {Eptatretus burgeri} SCOP: a.1.1.2 PDB: 1it3_A*
Probab=33.11 E-value=98 Score=20.39 Aligned_cols=71 Identities=8% Similarity=0.018 Sum_probs=45.1
Q ss_pred hhhHHhhhcCCH----HHHHHHhcccchhhhc-----CCCCC---CCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHH
Q psy13775 12 AGYHYSNFTARI----GLNKSLMLSRRLPILL-----GQYVP---MAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLA 79 (119)
Q Consensus 12 ~~~~Fs~Fgsdl----~tr~~L~rG~Rl~ElL-----~q~~P---lsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~ 79 (119)
.-..|++|+++. +..+.-.||+|++..| .--.| .+.-.++.-..+. --.|+.+....+...|+.
T Consensus 48 ~k~~F~~f~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~Ll~ 123 (146)
T 1it2_A 48 AQASFPKFSTKKSNLEQDPEVKHQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQKHKT----VFKVDSIWFKELSSIFVS 123 (146)
T ss_dssp GGGGCTTTTTCCSCGGGCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----TSCCCTTHHHHHHHHHHH
T ss_pred HHHHccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhh----hcCCCHHHHHHHHHHHHH
Confidence 446899997332 7888889999999888 22221 1122222223332 135888888999999988
Q ss_pred HHHhchh
Q psy13775 80 HIKSSER 86 (119)
Q Consensus 80 ~l~~~~~ 86 (119)
.|....+
T Consensus 124 ~l~~~lg 130 (146)
T 1it2_A 124 TIDGGAE 130 (146)
T ss_dssp HTTCCHH
T ss_pred HHHHhCC
Confidence 8876533
No 79
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=30.82 E-value=51 Score=28.77 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=32.3
Q ss_pred CcCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHhcCCCCHHHHHHHHHH
Q psy13775 60 GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTV 109 (119)
Q Consensus 60 G~ld~ipv~~I~~fe~~ll~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~ 109 (119)
|-||+..+-.|.+.-..+.+ |......+++.|.+.+++|+++.+.|.++
T Consensus 50 g~Ld~~~lr~i~~~~~~~~~-L~~Rk~~il~~i~~qg~lt~~l~~~i~~a 98 (785)
T 3bzc_A 50 GSLDDTQLRMLEERLRYLRE-LEERRGAILASIEEQGKLTPELARDIKLA 98 (785)
T ss_dssp TSCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTTCCCHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccCCCHHHHHHHHhc
Confidence 34555444444444333333 44455689999999999999998888754
No 80
>1f8p_A Neuropeptide Y (PNPY); helix; NMR {Synthetic} SCOP: j.6.1.1 PDB: 1ron_A 1fvn_A* 1icy_A 1tz4_A 2oon_A
Probab=30.82 E-value=48 Score=17.86 Aligned_cols=20 Identities=5% Similarity=0.159 Sum_probs=17.8
Q ss_pred CCCChhhHHHHHHHHHHHHH
Q psy13775 63 DKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 63 d~ipv~~I~~fe~~ll~~l~ 82 (119)
|+.++++..++-+.+..|+.
T Consensus 10 ~~a~pEela~Y~~~Lr~Yin 29 (37)
T 1f8p_A 10 EDAPAEDLARYYSALRHYIN 29 (37)
T ss_dssp SSCTTTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 57889999999999999985
No 81
>1ois_A DNA topoisomerase I; DNA-binding protein; HET: DNA; 1.90A {Saccharomyces cerevisiae} SCOP: e.15.1.1
Probab=28.99 E-value=1.8e+02 Score=21.62 Aligned_cols=77 Identities=18% Similarity=0.327 Sum_probs=40.5
Q ss_pred CCCCCCCH----------------HHHHHHHHHHhcCcCCCC-ChhhHHHHHHHHHHHHHhc----------------hh
Q psy13775 40 GQYVPMAI----------------EEQVAVIYCGVRGHLDKL-DPAKITTFEKEFLAHIKSS----------------ER 86 (119)
Q Consensus 40 ~q~~Plsv----------------~eQV~iL~a~~~G~ld~i-pv~~I~~fe~~ll~~l~~~----------------~~ 86 (119)
|.|.|+|- .|+||..||..-+- |-+ ..--...|-+.+...|... ..
T Consensus 17 P~YeplP~~Vk~~YdGkpv~L~p~~EEvAtf~a~ml~t-~y~~~~~F~kNFf~Df~~~l~~~~~~~~~~~I~~~~kcDFs 95 (223)
T 1ois_A 17 PPYQPLPSHIKLYYDGKPVDLPPQAEEVAGFFAALLES-DHAKNPVFQKNFFNDFLQVLKESGGPLNGIEIKEFSRCDFT 95 (223)
T ss_dssp CCCCCCCTTCCEEETTEEECCCHHHHHHHHHHHHTTTS-SGGGCHHHHHHHHHHHHHHHHHTTCCTTCCCCCCGGGEECH
T ss_pred CccccCCCCCceeECCEECcCCHHHHHHHHHHHHhcCC-ccccCHHHHHHHHHHHHHHhhhccccccCcccCchhhCCCH
Confidence 77887664 49999999986542 111 1222334444555555321 11
Q ss_pred H----HHHHHHhcCCCCHHHHHHHHHHHHHHHHhc
Q psy13775 87 G----LLESIKKEGKITEDTDAKLKTVVTNFLANF 117 (119)
Q Consensus 87 ~----~~~~I~~~~~l~~~~~~~L~~~i~~~~~~f 117 (119)
. +.++-+..+.+|.+-+.++++.-++..+.|
T Consensus 96 ~i~~~~~~~~e~kk~~skEEKk~~Keek~~~~~~y 130 (223)
T 1ois_A 96 KMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDY 130 (223)
T ss_dssp HHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhc
Confidence 1 222333456678887777777666665544
No 82
>4hrt_A Globin-2 A chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_A*
Probab=28.69 E-value=1.3e+02 Score=19.88 Aligned_cols=91 Identities=11% Similarity=0.021 Sum_probs=55.0
Q ss_pred hhhHHhhhcCCH-H--HHHHHhcccchhhhc-----CCCCCCCHHHHHHHHHHHhcCcCCCCChhhHHHHHHHHHHHHHh
Q psy13775 12 AGYHYSNFTARI-G--LNKSLMLSRRLPILL-----GQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKS 83 (119)
Q Consensus 12 ~~~~Fs~Fgsdl-~--tr~~L~rG~Rl~ElL-----~q~~Plsv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ll~~l~~ 83 (119)
....|++||... + +.+.-.||.+++..| .--.| ..-...+-..+-++. --.|+++....+...|+..|..
T Consensus 48 ~k~~F~~~~~~~~~~~~~~~~~H~~~v~~al~~~v~~ldd~-~~L~~~l~~l~~~H~-~~gV~p~~f~~~~~~Ll~~l~~ 125 (150)
T 4hrt_A 48 TKTYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDSLDDP-SRLKCVVEKFAVNHI-NRKISGDAFGAIVEPMKETLKA 125 (150)
T ss_dssp GGGGGGGGCCGGGGGGSHHHHHHHHHHHHHHHHHHHTTTCH-HHHHHHHHHHHHHHH-HTTCCHHHHGGGHHHHHHHHHH
T ss_pred HHHHHHHcCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHHHHHHH
Confidence 346888886444 2 456778899998777 33332 222222233344441 1268888888888888888765
Q ss_pred chhHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy13775 84 SERGLLESIKKEGKITEDTDAKLKTVVTNF 113 (119)
Q Consensus 84 ~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~ 113 (119)
.. +..+|++..+.-.+++...
T Consensus 126 ~l---------g~~~t~e~~~AW~k~~~~v 146 (150)
T 4hrt_A 126 RM---------GNYYSDDVAGAWAALVGVV 146 (150)
T ss_dssp HH---------GGGCCHHHHHHHHHHHHHH
T ss_pred Hh---------cccCCHHHHHHHHHHHHHH
Confidence 32 3348888776666665543
No 83
>2oif_A Horvu GLB1, non-legume hemoglobin; hexacoordinate hemoglobin, barley, ligand binding, non- symbiotic, symbiotic, evolution; HET: HEM; 1.80A {Hordeum vulgare} PDB: 2r50_A* 1d8u_A* 2gnv_A* 2gnw_A* 3qqq_A* 3qqr_A*
Probab=28.34 E-value=1.3e+02 Score=19.79 Aligned_cols=90 Identities=6% Similarity=-0.031 Sum_probs=59.7
Q ss_pred hhhHHhhhcC---CH-HHHHHHhcccchhhhc-------CCCCCC----CHHHHHHHHHHHhcCcCCCCChhhHHHHHHH
Q psy13775 12 AGYHYSNFTA---RI-GLNKSLMLSRRLPILL-------GQYVPM----AIEEQVAVIYCGVRGHLDKLDPAKITTFEKE 76 (119)
Q Consensus 12 ~~~~Fs~Fgs---dl-~tr~~L~rG~Rl~ElL-------~q~~Pl----sv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~ 76 (119)
....|++|+. ++ ..++.-.||.++...| .....+ +.-.++.-..+. . .|+.+....+...
T Consensus 47 ~k~~F~~~~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~~~~l~~Lg~~H~~-~----gV~p~~f~~~~~~ 121 (162)
T 2oif_A 47 ARQMFPFLRDSDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITVRETTLKRLGGTHLK-Y----GVADGHFEVTRFA 121 (162)
T ss_dssp GGGGCHHHHTCCSCGGGCHHHHHHHHHHHHHHHHHHHTHHHHTSCCCSSSCHHHHHHHHHH-T----TCCHHHHHHHHHH
T ss_pred HHHhcccccCCchhhhhCHHHHHHHHHHHHHHHHHHHHcCCHHhhhhHHHHHHHHHHHHHh-c----CCCHHHHHHHHHH
Confidence 4468888853 33 7777888999988876 111223 566666666665 2 5889999999999
Q ss_pred HHHHHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 77 FLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 77 ll~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
|+..|....+ ...++++..+.-.+++..+.
T Consensus 122 Ll~~l~~~lg--------~~~~t~e~~~AW~~~~~~i~ 151 (162)
T 2oif_A 122 LLETIKEALP--------ADMWGPEMRNAWGEAYDQLV 151 (162)
T ss_dssp HHHHHHHHSC--------GGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--------cccCCHHHHHHHHHHHHHHH
Confidence 9998865321 03478777666666655443
No 84
>3vi8_A Peroxisome proliferator-activated receptor alpha; nuclear receptor, protein-ligand complex, PPAR, transcriptio; HET: 13M; 1.75A {Homo sapiens} PDB: 2znn_A* 3et1_A* 3kdu_A* 3kdt_A* 2rew_A* 1i7g_A* 3g8i_A* 1kkq_A* 1k7l_A* 3sp6_A* 2npa_A* 2p54_A* 3fei_A* 3tkm_A* 2znq_A* 2znp_A* 3sp9_A* 3gwx_A* 3dy6_A* 1gwx_A* ...
Probab=25.74 E-value=52 Score=24.42 Aligned_cols=39 Identities=8% Similarity=0.254 Sum_probs=29.5
Q ss_pred HHhhhcCCH--HHHHHHhcccchhhhcCCCCCCCHHHHHHHHHHH
Q psy13775 15 HYSNFTARI--GLNKSLMLSRRLPILLGQYVPMAIEEQVAVIYCG 57 (119)
Q Consensus 15 ~Fs~Fgsdl--~tr~~L~rG~Rl~ElL~q~~Plsv~eQV~iL~a~ 57 (119)
+|.+|+... +.++.++.-++| |-|.=++.++|+++|=++
T Consensus 77 ~~~~~~~~~~~~v~~iVewAK~i----PgF~~L~~~DQi~LLk~~ 117 (273)
T 3vi8_A 77 IFHCCQCTSVETVTELTEFAKAI----PGFANLDLNDQVTLLKYG 117 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGS----TTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccC----cCcccCCHHHHHHHHHHH
Confidence 788888766 666666665554 889999999999887544
No 85
>1j0g_A Hypothetical protein 1810045K17; ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.6 PDB: 1wxs_A 1l7y_A
Probab=24.40 E-value=18 Score=23.10 Aligned_cols=14 Identities=21% Similarity=0.366 Sum_probs=12.8
Q ss_pred cchhhHHhhhcCCH
Q psy13775 10 QKAGYHYSNFTARI 23 (119)
Q Consensus 10 ~~~~~~Fs~Fgsdl 23 (119)
|.||.+|-+.||+|
T Consensus 68 QtAGnvFlKhGseL 81 (92)
T 1j0g_A 68 QTAGNVFLKHGSEL 81 (92)
T ss_dssp SBHHHHHHHTCSEE
T ss_pred hccchhhhhcCcee
Confidence 67999999999987
No 86
>1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A
Probab=23.88 E-value=27 Score=18.12 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=8.9
Q ss_pred CCCCHHHHHHHH
Q psy13775 43 VPMAIEEQVAVI 54 (119)
Q Consensus 43 ~Plsv~eQV~iL 54 (119)
.|+|+++||--|
T Consensus 1 ~~lsv~~QV~~L 12 (33)
T 1w1n_A 1 NELDVPEQVDKL 12 (33)
T ss_dssp CCSCSTHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 478888888654
No 87
>2l60_A Peptide YY; GPCR ligand, hormone; NMR {Synthetic}
Probab=23.80 E-value=88 Score=17.19 Aligned_cols=20 Identities=15% Similarity=0.380 Sum_probs=17.4
Q ss_pred CCCChhhHHHHHHHHHHHHH
Q psy13775 63 DKLDPAKITTFEKEFLAHIK 82 (119)
Q Consensus 63 d~ipv~~I~~fe~~ll~~l~ 82 (119)
|+-+++++..+-+++..|+.
T Consensus 14 ~~aspEela~Y~~~Lr~Yin 33 (41)
T 2l60_A 14 KKLSPEELNRYYASLRHYLN 33 (41)
T ss_dssp TTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 56789999999999999885
No 88
>1a31_A Protein (topoisomerase I); topoisomerase I/DNA, DNA, isomerase/DNA complex; HET: DNA 5IU PTR; 2.10A {Homo sapiens} SCOP: d.163.1.2 e.15.1.1 PDB: 1k4t_A* 1k4s_A* 1sc7_A* 1t8i_A* 1tl8_A* 1seu_A* 1a35_A* 1a36_A* 1r49_A* 1rrj_A* 1nh3_A* 1lpq_A* 1rr8_C* 1ej9_A*
Probab=23.49 E-value=2.4e+02 Score=23.93 Aligned_cols=77 Identities=14% Similarity=0.274 Sum_probs=43.4
Q ss_pred CCCCCCCHH----------------HHHHHHHHHhcCcCCCC-ChhhHHHHHHHHHHHHHhc------------hhH---
Q psy13775 40 GQYVPMAIE----------------EQVAVIYCGVRGHLDKL-DPAKITTFEKEFLAHIKSS------------ERG--- 87 (119)
Q Consensus 40 ~q~~Plsv~----------------eQV~iL~a~~~G~ld~i-pv~~I~~fe~~ll~~l~~~------------~~~--- 87 (119)
|.|.|||.. |+||..||..-+- |-+ ..--...|-+.+...|... ...
T Consensus 55 p~YeplP~~V~~~Ydg~pv~L~~~~EEvAtf~a~ml~t-~~~~~~~F~~NFf~df~~~l~~~~~~~i~~~~kcDF~~i~~ 133 (591)
T 1a31_A 55 PPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDH-EYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQ 133 (591)
T ss_dssp CCCCCCCTTCCCEETTEECCCCHHHHHHHHHHHTTTTS-GGGGCHHHHHHHHHHHHHHSCHHHHHHCCCGGGEECHHHHH
T ss_pred CcccCCCCCCceeECCEeccCCHHHHHHHHHHHHhcCC-cccccHHHHHHHHHHHHHHhhhcCCcccCchhhCCCHHHHH
Confidence 888877654 9999999986552 211 1112233434444444211 111
Q ss_pred -HHHHHHhcCCCCHHHHHHHHHHHHHHHHhc
Q psy13775 88 -LLESIKKEGKITEDTDAKLKTVVTNFLANF 117 (119)
Q Consensus 88 -~~~~I~~~~~l~~~~~~~L~~~i~~~~~~f 117 (119)
+...-+..+.++.+-...+++.-++..+.|
T Consensus 134 ~~~~~~e~kk~~s~eEK~~~k~~~~~~~~~y 164 (591)
T 1a31_A 134 YFKAQTEARKQMSKEEKLKIKEENEKLLKEY 164 (591)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhhc
Confidence 222233455688888888887777666655
No 89
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=23.07 E-value=1.6e+02 Score=19.18 Aligned_cols=72 Identities=8% Similarity=0.049 Sum_probs=45.9
Q ss_pred hhhHHhhhcCC-----H-HHHHHHhcccchhhhc-----CCCCCC---CHHHHHHHHHHHhcCcCCCCChhhHHHHHHHH
Q psy13775 12 AGYHYSNFTAR-----I-GLNKSLMLSRRLPILL-----GQYVPM---AIEEQVAVIYCGVRGHLDKLDPAKITTFEKEF 77 (119)
Q Consensus 12 ~~~~Fs~Fgsd-----l-~tr~~L~rG~Rl~ElL-----~q~~Pl---sv~eQV~iL~a~~~G~ld~ipv~~I~~fe~~l 77 (119)
.-..|++|+.. + ...+.-.||.|++..| .--.|= +.-.++.-..+. --.|+.+....+...+
T Consensus 48 ~k~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~H~~----~~~V~p~~f~~~~~~L 123 (149)
T 2lhb_A 48 AQEFFPKFKGLTTADELKKSADVRWHAERIINAVDDAVASMDDTEKMSMKLRNLSGKHAK----SFQVDPEYFKVLAAVI 123 (149)
T ss_dssp GGGGCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH----TSCCCGGGHHHHHHHH
T ss_pred HHHHhhhhcCCCCHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhh----ccCCCHHHHHHHHHHH
Confidence 45689999643 2 5777788999999877 222221 112222222222 1368899999999999
Q ss_pred HHHHHhchhH
Q psy13775 78 LAHIKSSERG 87 (119)
Q Consensus 78 l~~l~~~~~~ 87 (119)
+..|....++
T Consensus 124 l~~l~~~lg~ 133 (149)
T 2lhb_A 124 ADTVAAGDAG 133 (149)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHHHcch
Confidence 9999766543
No 90
>4h3z_A TRNA (guanine-N(1)-)-methyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SAH; 2.15A {Burkholderia phymatum} PDB: 4h3y_A*
Probab=22.00 E-value=1.9e+02 Score=22.09 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=33.5
Q ss_pred hhHHHHHHH-HHHHHHhchhHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy13775 68 AKITTFEKE-FLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 114 (119)
Q Consensus 68 ~~I~~fe~~-ll~~l~~~~~~~~~~I~~~~~l~~~~~~~L~~~i~~~~ 114 (119)
++|.++..+ -+..-....|++++....++.||++..+.|.+..++..
T Consensus 227 ~~I~~WR~~qsl~rT~~rRPDLl~~~~~~~~Ls~~d~~~L~~~~~e~~ 274 (276)
T 4h3z_A 227 AEIEQWRRREALRNTWLKRPDLIVQARKNKLLSRADEAWLASLAKDAS 274 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHhhhhcCCCCHHHHHHHHHHHHHhh
Confidence 455665433 22333445799999998899999999998888777654
Done!