BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13776
(539 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35381|ATPA_DROME ATP synthase subunit alpha, mitochondrial OS=Drosophila
melanogaster GN=blw PE=1 SV=2
Length = 552
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 285/539 (52%), Positives = 322/539 (59%), Gaps = 130/539 (24%)
Query: 1 MALLSARLAAALAKNIPSSLNQANW----AATQIASRKFNVSASSRAAEISSILEERILG 56
M++ SARLA+++A+N+P + NQ A +A+RK +V+++ R+AEIS+ILEERILG
Sbjct: 1 MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILG 60
Query: 57 SAPKAVAYRQMSLLLRRPPGREAYPGD----VFYLHSRLLERSAKMSEAHGGGSLTALPV 112
APKA GR GD V+ L++ + + S G +L P
Sbjct: 61 VAPKADL---------EETGRVLSIGDGIARVYGLNNIQADEMVEFSSGLKGMALNLEP- 110
Query: 113 IETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--IGDRQTGKTALAI 170
+V + N I G I T V G G+++ +G+ GK A
Sbjct: 111 -----DNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGA--- 162
Query: 171 DTIINQKRKKR---------RRLLKYNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTA 221
IN K + R R+ + GIKAVDSLVPIGRGQRELIIGDRQTGKTA
Sbjct: 163 ---INTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 219
Query: 222 LAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKK 281
LAIDTIINQK A QDE KK
Sbjct: 220 LAIDTIINQKRFNEA---------------------------------------QDESKK 240
Query: 282 LYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFR 341
LYCIYVAIGQKRSTVAQIVKRLTDSGAMGY++IVSATASDAAPLQYLAPYSGCAMGE+FR
Sbjct: 241 LYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFR 300
Query: 342 DNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGG 401
D GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKMS A GG
Sbjct: 301 DKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGG 360
Query: 402 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNVGVVVFGND 461
GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 361 GSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG------------------ 402
Query: 462 RLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
IRPAINVGLSVSRVGSAAQT+AMKQ
Sbjct: 403 ---------------------------------IRPAINVGLSVSRVGSAAQTKAMKQV 428
>sp|Q5R546|ATPA_PONAB ATP synthase subunit alpha, mitochondrial OS=Pongo abelii GN=ATP5A1
PE=2 SV=1
Length = 553
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/511 (52%), Positives = 300/511 (58%), Gaps = 134/511 (26%)
Query: 30 IASRKFNVSAS----SRAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-- 83
IA+R F+ S + + AE+SSILEERILG A +V + GR GD
Sbjct: 31 IAARNFHASNTHLQKTGTAEMSSILEERILG-ADTSVDLEET--------GRVLSIGDGI 81
Query: 84 --VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 141
V L + E + S G SL P +V + N I +G I T
Sbjct: 82 ARVHGLRNVQAEEMVEFSSGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDIVKRTG 135
Query: 142 LFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRL-LK----------YN 188
V G G+++ +G+ GK ++ K RRR+ LK
Sbjct: 136 AIVDVPVGEELLGRVVDALGNAIDGKGPIS--------SKTRRRVGLKAPGIIPRISVRE 187
Query: 189 LLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCA 248
+ GIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQK
Sbjct: 188 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKR---------------- 231
Query: 249 MGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGA 308
F D DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ A
Sbjct: 232 ----FNDG-------------------SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADA 268
Query: 309 MGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLL 368
M YTI+VSATASDAAPLQYLAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLL
Sbjct: 269 MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLL 328
Query: 369 RRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISI 428
RRPPGREAYPGDVFYLHSRLLER+AKM++A GGGSLTALPVIETQAGDVSAYIPTNVISI
Sbjct: 329 RRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISI 388
Query: 429 TDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGR 488
TDGQIFLETELFYKG
Sbjct: 389 TDGQIFLETELFYKG--------------------------------------------- 403
Query: 489 VVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQTRAMKQ
Sbjct: 404 ------IRPAINVGLSVSRVGSAAQTRAMKQ 428
>sp|A5A6H5|ATPA_PANTR ATP synthase subunit alpha, mitochondrial OS=Pan troglodytes
GN=ATP5A1 PE=2 SV=1
Length = 553
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/510 (52%), Positives = 298/510 (58%), Gaps = 132/510 (25%)
Query: 30 IASRKFNVSAS----SRAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-- 83
IA+R F+ S + + AE+SSILEERILG A +V + GR GD
Sbjct: 31 IAARNFHASNTHLQKTGTAEMSSILEERILG-ADTSVDLEET--------GRVLSIGDGI 81
Query: 84 --VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 141
V L + E + S G SL P +V + N I +G I T
Sbjct: 82 ARVHGLRNVQAEEMVEFSSGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDIVKRTG 135
Query: 142 LFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNL 189
V G G+++ +G+ GK + T +RR LK
Sbjct: 136 AIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT-------RRRVGLKAPGIIPRISVREP 188
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQK
Sbjct: 189 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKR----------------- 231
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
F D DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ AM
Sbjct: 232 ---FNDG-------------------SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAM 269
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+VSATASDAAPLQYLAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 270 KYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 329
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKM++A GGGSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 330 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT 389
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELFYKG
Sbjct: 390 DGQIFLETELFYKG---------------------------------------------- 403
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQTRAMKQ
Sbjct: 404 -----IRPAINVGLSVSRVGSAAQTRAMKQ 428
>sp|P25705|ATPA_HUMAN ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 268/510 (52%), Positives = 298/510 (58%), Gaps = 132/510 (25%)
Query: 30 IASRKFNVSAS----SRAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-- 83
IA+R F+ S + + AE+SSILEERILG A +V + GR GD
Sbjct: 31 IAARNFHASNTHLQKTGTAEMSSILEERILG-ADTSVDLEET--------GRVLSIGDGI 81
Query: 84 --VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 141
V L + E + S G SL P +V + N I +G I T
Sbjct: 82 ARVHGLRNVQAEEMVEFSSGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDIVKRTG 135
Query: 142 LFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNL 189
V G G+++ +G+ GK + T +RR LK
Sbjct: 136 AIVDVPVGEELLGRVVDALGNAIDGKGPIGSKT-------RRRVGLKAPGIIPRISVREP 188
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQK
Sbjct: 189 MQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKR----------------- 231
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
F D DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ AM
Sbjct: 232 ---FNDG-------------------SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAM 269
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+VSATASDAAPLQYLAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 270 KYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 329
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKM++A GGGSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 330 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT 389
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELFYKG
Sbjct: 390 DGQIFLETELFYKG---------------------------------------------- 403
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQTRAMKQ
Sbjct: 404 -----IRPAINVGLSVSRVGSAAQTRAMKQ 428
>sp|P19483|ATPA_BOVIN ATP synthase subunit alpha, mitochondrial OS=Bos taurus GN=ATP5A1
PE=1 SV=1
Length = 553
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/511 (52%), Positives = 298/511 (58%), Gaps = 134/511 (26%)
Query: 30 IASRKFNVSAS----SRAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-- 83
IA+R + S S + AE+SSILEERILG A +V + GR GD
Sbjct: 31 IAARNLHASNSRLQKTGTAEVSSILEERILG-ADTSVDLEET--------GRVLSIGDGI 81
Query: 84 --VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 141
V L + E + S G SL P +V + N I +G I T
Sbjct: 82 ARVHGLRNVQAEEMVEFSSGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDIVKRTG 135
Query: 142 LFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRL-LK----------YN 188
V G G+++ +G+ GK + K RRR+ LK
Sbjct: 136 AIVDVPVGEELLGRVVDALGNAIDGKGPIG--------SKARRRVGLKAPGIIPRISVRE 187
Query: 189 LLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCA 248
+ GIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQK
Sbjct: 188 PMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKR---------------- 231
Query: 249 MGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGA 308
F D DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ A
Sbjct: 232 ----FNDG-------------------TDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADA 268
Query: 309 MGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLL 368
M YTI+VSATASDAAPLQYLAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLL
Sbjct: 269 MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLL 328
Query: 369 RRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISI 428
RRPPGREAYPGDVFYLHSRLLER+AKM++A GGGSLTALPVIETQAGDVSAYIPTNVISI
Sbjct: 329 RRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISI 388
Query: 429 TDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGR 488
TDGQIFLETELFYKG
Sbjct: 389 TDGQIFLETELFYKG--------------------------------------------- 403
Query: 489 VVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQTRAMKQ
Sbjct: 404 ------IRPAINVGLSVSRVGSAAQTRAMKQ 428
>sp|P15999|ATPA_RAT ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus
GN=Atp5a1 PE=1 SV=2
Length = 553
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 264/495 (53%), Positives = 289/495 (58%), Gaps = 134/495 (27%)
Query: 44 AEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD----VFYLHSRLLERSAKMS 99
AE+SSILEERILG A +V + GR GD V L + E + S
Sbjct: 49 AEMSSILEERILG-ADTSVDLEET--------GRVLSIGDGIARVHGLRNVQAEEMVEFS 99
Query: 100 EAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLIIG 159
G SL P +V + N I +G I T V +G
Sbjct: 100 SGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDIVKRTGAIVDVP----------VG 143
Query: 160 DRQTGKTALAIDTIINQK----RKKRRRL-LK----------YNLLSAGIKAVDSLVPIG 204
D G+ A+ I+ K K RRR+ LK + GIKAVDSLVPIG
Sbjct: 144 DELLGRVVDALGNAIDGKGPVGSKIRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIG 203
Query: 205 RGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIY 264
RGQRELIIGDRQTGKT++AIDTIINQK F D
Sbjct: 204 RGQRELIIGDRQTGKTSIAIDTIINQKR--------------------FNDG-------- 235
Query: 265 DDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAP 324
DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ AM YTI+VSATASDAAP
Sbjct: 236 -----------TDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAP 284
Query: 325 LQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 384
LQYLAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL
Sbjct: 285 LQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 344
Query: 385 HSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGM 444
HSRLLER+AKM+++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 345 HSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG- 403
Query: 445 ALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLS 504
IRPAINVGLS
Sbjct: 404 --------------------------------------------------IRPAINVGLS 413
Query: 505 VSRVGSAAQTRAMKQ 519
VSRVGSAAQTRAMKQ
Sbjct: 414 VSRVGSAAQTRAMKQ 428
>sp|Q03265|ATPA_MOUSE ATP synthase subunit alpha, mitochondrial OS=Mus musculus GN=Atp5a1
PE=1 SV=1
Length = 553
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/492 (53%), Positives = 289/492 (58%), Gaps = 128/492 (26%)
Query: 44 AEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD----VFYLHSRLLERSAKMS 99
AE+SSILEERILG A +V + GR GD V L + E + S
Sbjct: 49 AEMSSILEERILG-ADTSVDLEET--------GRVLSIGDGIARVHGLRNVQAEEMVEFS 99
Query: 100 EAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI-- 157
G SL P +V + N I +G + T V G G+++
Sbjct: 100 SGLKGMSLNLEP------DNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEELLGRVVDA 153
Query: 158 IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNLLSAGIKAVDSLVPIGRGQ 207
+G+ GK + T +RR LK + GIKAVDSLVPIGRGQ
Sbjct: 154 LGNAIDGKGPIGSKT-------RRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQ 206
Query: 208 RELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 267
RELIIGDRQTGKT++AIDTIINQK F D
Sbjct: 207 RELIIGDRQTGKTSIAIDTIINQKR--------------------FNDG----------- 235
Query: 268 SKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQY 327
DEKKKLYCIYVAIGQKRSTVAQ+VKRLTD+ AM YTI+VSATASDAAPLQY
Sbjct: 236 --------TDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQY 287
Query: 328 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 387
LAPYSGC+MGE+FRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 288 LAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 347
Query: 388 LLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALN 447
LLER+AKM+++ GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 348 LLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG---- 403
Query: 448 LEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSR 507
IRPAINVGLSVSR
Sbjct: 404 -----------------------------------------------IRPAINVGLSVSR 416
Query: 508 VGSAAQTRAMKQ 519
VGSAAQTRAMKQ
Sbjct: 417 VGSAAQTRAMKQ 428
>sp|Q9XXK1|ATPA_CAEEL ATP synthase subunit alpha, mitochondrial OS=Caenorhabditis elegans
GN=H28O16.1 PE=1 SV=1
Length = 538
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/529 (48%), Positives = 300/529 (56%), Gaps = 138/529 (26%)
Query: 12 LAKNIPSSLNQANWAATQIASRKFNVSASSRAAEISSILEERILGSAPKAVAYRQMSLLL 71
L+K I ++LN A + A + +E+S ILEERILG+
Sbjct: 2 LSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTET------------ 49
Query: 72 RRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAG-----------DV 120
G ++L ++ +G ++ A ++E +G +V
Sbjct: 50 ----------GINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMNLDVDNV 99
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKR 178
+ N I +G I T V G G+++ +G+ GK +A N +R
Sbjct: 100 GVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIA-----NARR 154
Query: 179 KKRR--------RLLKYNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQ 230
+ RL + G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTIINQ
Sbjct: 155 SRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 214
Query: 231 KSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIG 290
K F D G D+KKKL+CIYVA+G
Sbjct: 215 KR--------------------FNDAG-------------------DDKKKLFCIYVAVG 235
Query: 291 QKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALII 350
QKRSTVAQIVKRLTD+GAM YTI+VSATASDAAPLQ+LAPYSGCAMGE FRDNGKHALII
Sbjct: 236 QKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNGKHALII 295
Query: 351 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVI 410
+DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKM+ + GGGSLTALPVI
Sbjct: 296 FDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVI 355
Query: 411 ETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIV 470
ETQAGDVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 356 ETQAGDVSAYIPTNVISITDGQIFLETELFYKG--------------------------- 388
Query: 471 KRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
+RPAINVGLSVSRVGSAAQT+AMKQ
Sbjct: 389 ------------------------VRPAINVGLSVSRVGSAAQTKAMKQ 413
>sp|P08428|ATPA_XENLA ATP synthase subunit alpha, mitochondrial OS=Xenopus laevis
GN=atp5a PE=2 SV=1
Length = 545
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 258/524 (49%), Positives = 286/524 (54%), Gaps = 148/524 (28%)
Query: 20 LNQANWAATQIASRKFNVSA-----SSRAAEISSILEERILGSAPKAVAYRQMSLLLRRP 74
+++ A +A+R + S S AE+SSILEERILG+ A
Sbjct: 21 VSKKALGAAFVATRNIHASGVWPPEKSGTAEVSSILEERILGADTTADL---------EE 71
Query: 75 PGREAYPGD----VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVIS 130
GR GD V+ L + E + S G SL P +V N
Sbjct: 72 TGRVLSIGDGIARVYGLRNVQAEEMVEFSSGLKGMSLNLEP------DNVGVVGLANDKL 125
Query: 131 ITDGQIFLETELFYKVDRGSINCGQLIIGDRQTGKTALAIDTIINQK----RKKRRRL-L 185
I +G I T V +GD G+ A+ I+ K K RRR+ L
Sbjct: 126 IKEGDIVKRTGAIVDVP----------VGDELLGRVVDALGNTIDGKGPIGSKTRRRVGL 175
Query: 186 K----------YNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYA 235
K + GIKAVDSLVPIGRGQRELIIGDRQTGKT++AIDTIINQK
Sbjct: 176 KAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKR--- 232
Query: 236 APLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRST 295
F D DEKKKLYCIYVAIGQKR
Sbjct: 233 -----------------FNDG-------------------TDEKKKLYCIYVAIGQKR-- 254
Query: 296 VAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLS 355
LTD+ AM YTI+VS TASDAAPLQYLAPYSGC+MGE+FRDNG HALIIYDDLS
Sbjct: 255 -------LTDADAMKYTIVVSRTASDAAPLQYLAPYSGCSMGEYFRDNGTHALIIYDDLS 307
Query: 356 KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAG 415
KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKM++ GGGSLTALPVIETQAG
Sbjct: 308 KQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSLTALPVIETQAG 367
Query: 416 DVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGA 475
DVSAYIPTNVISITDGQIFLETELFYKG
Sbjct: 368 DVSAYIPTNVISITDGQIFLETELFYKG-------------------------------- 395
Query: 476 IVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQTRAMKQ
Sbjct: 396 -------------------IRPAINVGLSVSRVGSAAQTRAMKQ 420
>sp|Q2VZN0|ATPA_MAGSA ATP synthase subunit alpha OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpA PE=3 SV=1
Length = 509
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/333 (60%), Positives = 223/333 (66%), Gaps = 90/333 (27%)
Query: 187 YNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSG 246
+ +S GIKAVD+L+PIGRGQREL+IGDRQTGKTA+ +DTIINQK + A
Sbjct: 143 HEPMSTGIKAVDALIPIGRGQRELVIGDRQTGKTAILVDTIINQKRWHDA---------- 192
Query: 247 CAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDS 306
DEK KL+CIYVA+GQKRSTVAQIVK LTD
Sbjct: 193 -----------------------------NDEKAKLFCIYVAVGQKRSTVAQIVKTLTDY 223
Query: 307 GAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSL 366
GAM YTI+V+ATAS+ APLQ++APY+GC MGE+FRDNG HALIIYDDLSKQAVAYRQMSL
Sbjct: 224 GAMDYTIVVAATASEPAPLQFIAPYAGCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSL 283
Query: 367 LLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVI 426
LLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVI
Sbjct: 284 LLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVI 343
Query: 427 SITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLL 486
SITDGQIFLETELFYKG
Sbjct: 344 SITDGQIFLETELFYKG------------------------------------------- 360
Query: 487 GRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPA+NVGLSVSRVGSAAQ +AMKQ
Sbjct: 361 --------IRPAVNVGLSVSRVGSAAQIKAMKQ 385
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 87/95 (91%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA D
Sbjct: 274 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQAND 333
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLETELFYK R ++N G
Sbjct: 334 VSAYIPTNVISITDGQIFLETELFYKGIRPAVNVG 368
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 50/53 (94%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KGMALNLE DNVGVV+FG+DR IKEGD+VKRTG+IVDVPVG+ LLGRVVDALG
Sbjct: 60 KGMALNLETDNVGVVIFGDDRNIKEGDVVKRTGSIVDVPVGKGLLGRVVDALG 112
>sp|P49375|ATPA_KLULA ATP synthase subunit alpha, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP1 PE=1 SV=1
Length = 548
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/525 (45%), Positives = 299/525 (56%), Gaps = 127/525 (24%)
Query: 10 AALAKNIPSSLNQANWAATQIASRKFNVSASSRAAEISSILEERILGSAPKAVAYRQMSL 69
+ +A N+ S+N+ A +A R+F SA ++ E+SSILEERI G + ++
Sbjct: 13 SVVAANLVRSMNRVARPALVVAGRRF-ASAKAQPTEVSSILEERIRGVSEESNL------ 65
Query: 70 LLRRPPGREAYPGD----VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIP 125
GR GD VF L++ E + S G +L P G V +
Sbjct: 66 ---NETGRVLAVGDGIARVFGLNNVQAEELVEFSSGVKGMALNLEP------GQVGIVLF 116
Query: 126 TNVISITDGQIFLETELFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRR 183
+ + +G++ T V G G+++ +G+ GK IN + R +
Sbjct: 117 GSDRLVKEGEVVKRTGKIVDVGVGPELLGRVVDALGNPIDGKGP------INASGRSRAQ 170
Query: 184 LLKYNLL---------SAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIY 234
+ +L G+K+VD+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQK
Sbjct: 171 VKAPGILPRRSVHEPVQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRW- 229
Query: 235 AAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRS 294
+NG DE KKLYC+YVA+GQKRS
Sbjct: 230 --------------------NNGT------------------DESKKLYCVYVAVGQKRS 251
Query: 295 TVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 354
TVAQ+V+ L A+ Y+IIV+ATAS+AAPLQY+AP++ A+GE+FRDNG+HALIIYDDL
Sbjct: 252 TVAQLVQTLEQHDALKYSIIVAATASEAAPLQYIAPFTAAAIGEWFRDNGRHALIIYDDL 311
Query: 355 SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQA 414
SKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE +GGGSLTALPVIETQ
Sbjct: 312 SKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSLTALPVIETQG 371
Query: 415 GDVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTG 474
GDVSAYIPTNVISITDGQIFLE ELFYKG
Sbjct: 372 GDVSAYIPTNVISITDGQIFLEAELFYKG------------------------------- 400
Query: 475 AIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +A+KQ
Sbjct: 401 --------------------IRPAINVGLSVSRVGSAAQVKALKQ 425
>sp|A8GY42|ATPA_RICB8 ATP synthase subunit alpha OS=Rickettsia bellii (strain OSU 85-389)
GN=atpA PE=3 SV=1
Length = 512
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/331 (60%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIK +D L+PIGRGQRELIIGDRQTGKTA+AIDTIINQK
Sbjct: 146 VQTGIKVIDLLIPIGRGQRELIIGDRQTGKTAIAIDTIINQKK----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L DEK K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSL--------------NDEKDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTIIVSATAS+AA LQ++APY+ C+MGE+FRDNGKHALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTIIVSATASEAAALQFVAPYAACSMGEYFRDNGKHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLE +AKMSE GGGSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLECAAKMSEEKGGGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
IRPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----IRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLE +AKMSE GGGSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLECAAKMSEEKGGGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGIRPAVNVG 368
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 427 SITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLL 486
++ G++ +E E KG+ LNLE D+V V+ G+D +++GD VKRT +++V VG LL
Sbjct: 46 NVQSGEV-VEFESGVKGLVLNLENDSVDAVIMGDDNQVQQGDKVKRTKEVLEVLVGTALL 104
Query: 487 GRVVDALG 494
GRVVDALG
Sbjct: 105 GRVVDALG 112
>sp|A8F2U2|ATPA_RICM5 ATP synthase subunit alpha OS=Rickettsia massiliae (strain Mtu5)
GN=atpA PE=3 SV=2
Length = 510
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 224/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT+IVSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTLIVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSEA G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEAKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 88/94 (93%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSEA G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEAKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+D +++GD VKRT +++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALG 112
>sp|C4K229|ATPA_RICPU ATP synthase subunit alpha OS=Rickettsia peacockii (strain Rustic)
GN=atpA PE=3 SV=1
Length = 510
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 224/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT+IVSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTLIVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSEA G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEAKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 88/94 (93%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSEA G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEAKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+D +++GD VKRT +++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALG 112
>sp|Q4UK16|ATPA_RICFE ATP synthase subunit alpha OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=atpA PE=3 SV=1
Length = 510
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+VSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTIVVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+D +++GD VKRT +++VP+G+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPIGKALLGRVVDALG 112
>sp|A8GPZ6|ATPA_RICAH ATP synthase subunit alpha OS=Rickettsia akari (strain Hartford)
GN=atpA PE=3 SV=1
Length = 512
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+VSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTIVVSATASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGNGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGNGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+V V+ G+D +++GD VKRT +++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVSAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALG 112
>sp|A8GTS8|ATPA_RICRS ATP synthase subunit alpha OS=Rickettsia rickettsii (strain Sheila
Smith) GN=atpA PE=3 SV=1
Length = 510
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT+IVSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTLIVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VGVV+ G+D +++GD VKRT +++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGVVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALG 112
>sp|B0BVB8|ATPA_RICRO ATP synthase subunit alpha OS=Rickettsia rickettsii (strain Iowa)
GN=atpA PE=3 SV=2
Length = 510
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT+IVSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTLIVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VGVV+ G+D +++GD VKRT +++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGVVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALG 112
>sp|Q92G86|ATPA_RICCN ATP synthase subunit alpha OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=atpA PE=3 SV=2
Length = 510
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT+IVSATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTLIVSATASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFYKG
Sbjct: 347 DGQIFLESELFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
+RPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----VRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE G GSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE+ELFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESELFYKGVRPAVNVG 368
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+D +++GD VKRT A+++VPVG+ LLGRVVDALG
Sbjct: 60 KGLVLNLENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALG 112
>sp|Q68VU6|ATPA_RICTY ATP synthase subunit alpha OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=atpA PE=3 SV=1
Length = 512
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+AIDTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAIDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+V ATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTIVVLATASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMSE GGGSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSEEKGGGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE++LFYKG
Sbjct: 347 DGQIFLESDLFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
IRPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----IRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMSE GGGSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEEKGGGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE++LFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESDLFYKGIRPAVNVG 368
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+ +K+GD VKRT ++ V VG+ LLGR VDALG
Sbjct: 60 KGLILNLEHDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKALLGRTVDALG 112
>sp|P24487|ATPA_SCHPO ATP synthase subunit alpha, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=atp1 PE=3 SV=1
Length = 536
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/495 (47%), Positives = 289/495 (58%), Gaps = 125/495 (25%)
Query: 45 EISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE-RSAKMSEAHG 103
E+ SILEERI G AY Q ++ GR GD S L ++ ++ E
Sbjct: 35 EVPSILEERIRG------AYNQAQMM---ESGRVLSIGDGIARISGLSNVQAEELVEFSS 85
Query: 104 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--IGDR 161
G AL + +A V + N + +G++ T V G G+++ +G+
Sbjct: 86 GIKGMALNL---EADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNP 142
Query: 162 QTGKTALAIDTIINQKRKKRRRL-LK----------YNLLSAGIKAVDSLVPIGRGQREL 210
GK + K +RRR+ LK + G+KA+DS+VPIGRGQREL
Sbjct: 143 IDGKGPI--------KTTERRRVQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQREL 194
Query: 211 IIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQ 270
IIGDRQTGKTA+A+DTI+N K R N
Sbjct: 195 IIGDRQTGKTAIALDTILNHK----------------------RWNNS------------ 220
Query: 271 AVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAP 330
DE KKLYC+YVA+GQKRSTVAQ+V++L ++ ++ Y+IIV+ATAS++APLQYLAP
Sbjct: 221 -----SDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVAATASESAPLQYLAP 275
Query: 331 YSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 390
+SGCAMGE+FRDNGKH L++YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 276 FSGCAMGEWFRDNGKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 335
Query: 391 RSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEP 450
R+AKMS HGGGSLTALPVIETQ GDVSAYIPTNVISITDGQIFLE+ELF+KG
Sbjct: 336 RAAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKG------- 388
Query: 451 DNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGS 510
IRPAINVGLSVSRVGS
Sbjct: 389 --------------------------------------------IRPAINVGLSVSRVGS 404
Query: 511 AAQTRAMKQT-GKIR 524
AAQ +AMKQ G+I+
Sbjct: 405 AAQVKAMKQVAGQIK 419
>sp|Q2N8Z5|ATPA_ERYLH ATP synthase subunit alpha OS=Erythrobacter litoralis (strain
HTCC2594) GN=atpA PE=3 SV=1
Length = 509
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/497 (46%), Positives = 290/497 (58%), Gaps = 123/497 (24%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKMSE 100
RAAEIS +++++I +A S+L GD + +H ++ +M E
Sbjct: 4 RAAEISKVIKDQIANFGTEAQVSEVGSVL---------SVGDGIARIHGLDNVQAGEMVE 54
Query: 101 AHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--I 158
G AL + +A +V I + I +G TE V G G+++ +
Sbjct: 55 FANGVQGMALNL---EADNVGVVIFGSDAEIKEGDNVKRTETIVDVPVGKALLGRVVDAL 111
Query: 159 GDRQTGKTALAIDTIINQKRKKRRRLLKY----------NLLSAGIKAVDSLVPIGRGQR 208
G+ GK + + ++RR LK + +G+KA+D+LVP+GRGQR
Sbjct: 112 GNPIDGKGPI-------ETTERRRVELKAPGIIPRKSVDEPVQSGLKAIDALVPVGRGQR 164
Query: 209 ELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLS 268
ELIIGDRQTGKTA+AIDT ++
Sbjct: 165 ELIIGDRQTGKTAVAIDTF---------------------------------------IN 185
Query: 269 KQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYL 328
++ V DE KKLYC+YVA+GQKRSTVAQIVK L ++GAM Y+I+V+ATAS+ APLQYL
Sbjct: 186 QKTVNESDDESKKLYCVYVAVGQKRSTVAQIVKSLEENGAMEYSIVVAATASEPAPLQYL 245
Query: 329 APYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 388
APY+GCAMGEFFRDNG HA+I+YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL
Sbjct: 246 APYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 305
Query: 389 LERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNL 448
LER+AKM++ +GGGSLTALP+IETQAGDVSAYIPTNVISITDGQIFLET+LFY+G
Sbjct: 306 LERAAKMNDDNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYQG----- 360
Query: 449 EPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRV 508
+RPAINVGLSVSRV
Sbjct: 361 ----------------------------------------------VRPAINVGLSVSRV 374
Query: 509 GSAAQTRAMKQ-TGKIR 524
G AAQT+AMK+ +G I+
Sbjct: 375 GGAAQTKAMKKVSGSIK 391
>sp|P26854|ATPAM_MARPO ATP synthase subunit alpha, mitochondrial OS=Marchantia polymorpha
GN=ATPA PE=3 SV=2
Length = 513
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/330 (60%), Positives = 223/330 (67%), Gaps = 89/330 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQK
Sbjct: 147 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK------------------ 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Q A + +KLYC+YVAIGQKRSTVAQ+VK L+++GA+
Sbjct: 189 --------------------QINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGAL 228
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+IIV+ATASD APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQ+VAYRQMSLLLR
Sbjct: 229 EYSIIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLR 288
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREA+PGDVFYLHSRLLER+AKMS+ G GSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 289 RPPGREAFPGDVFYLHSRLLERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 348
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELFY+G
Sbjct: 349 DGQIFLETELFYRGS--------------------------------------------- 363
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
RPAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 364 ------RPAINVGLSVSRVGSAAQLKAMKQ 387
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 88/95 (92%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
++VAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AKMS+ G GSLTALPVIETQAGD
Sbjct: 276 QSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDQTGAGSLTALPVIETQAGD 335
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLETELFY+ R +IN G
Sbjct: 336 VSAYIPTNVISITDGQIFLETELFYRGSRPAINVG 370
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KGMALNLE +NVG+V+FG+D IKEGDIVKRTG+IVDVPVG+ +LGRVVDALG+
Sbjct: 61 KGMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGV 114
>sp|B0UE41|ATPA_METS4 ATP synthase subunit alpha OS=Methylobacterium sp. (strain 4-46)
GN=atpA PE=3 SV=1
Length = 509
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 228/339 (67%), Gaps = 91/339 (26%)
Query: 187 YNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSG 246
+ ++ G+K+VD+L+PIGRGQRELIIGDRQTGKTA+A+DTI+NQK +
Sbjct: 143 HEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIALDTILNQKPAHEG---------- 192
Query: 247 CAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDS 306
DEK KLYC+YVA+GQKRSTVAQ VK L D+
Sbjct: 193 -----------------------------TDEKAKLYCVYVAVGQKRSTVAQFVKVLEDN 223
Query: 307 GAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSL 366
GA+ Y+I+++ATASD AP+Q+LAP+SGCAMGEFFRDNG HA+IIYDDLSKQAVAYRQMSL
Sbjct: 224 GALDYSIVIAATASDPAPMQFLAPFSGCAMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSL 283
Query: 367 LLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVI 426
LLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVI
Sbjct: 284 LLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVI 343
Query: 427 SITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLL 486
SITDGQIFLET+LFY+G
Sbjct: 344 SITDGQIFLETDLFYQG------------------------------------------- 360
Query: 487 GRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
+RPA+NVGLSVSRVGSAAQT+AMK+ GKI+
Sbjct: 361 --------VRPAVNVGLSVSRVGSAAQTKAMKKVAGKIK 391
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 87/95 (91%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA D
Sbjct: 274 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQAND 333
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLET+LFY+ R ++N G
Sbjct: 334 VSAYIPTNVISITDGQIFLETDLFYQGVRPAVNVG 368
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 50/61 (81%)
Query: 434 FLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDAL 493
+E E +GMALNLE DNVGVV+FG DR IKEG VKRTGAIVDVPVG+ LLGRVVDAL
Sbjct: 52 MVEFESGVRGMALNLEQDNVGVVIFGVDRDIKEGQTVKRTGAIVDVPVGKGLLGRVVDAL 111
Query: 494 G 494
G
Sbjct: 112 G 112
>sp|A9W2R3|ATPA_METEP ATP synthase subunit alpha OS=Methylobacterium extorquens (strain
PA1) GN=atpA PE=3 SV=1
Length = 509
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/507 (45%), Positives = 293/507 (57%), Gaps = 143/507 (28%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEA 101
RAAEIS+IL+E+I + G+EA +V ++L ++
Sbjct: 4 RAAEISAILKEQI------------------KNFGQEAEVTEV----GQVLAVGDGIARV 41
Query: 102 HGGGSLTALPVIETQAG-----------DVSAYIPTNVISITDGQIFLETELFYKVDRGS 150
+G ++ A ++E ++G +V I + I +GQ T V G
Sbjct: 42 YGLDNVQAGEMVEFESGVRGMALNLEQDNVGVVIFGSDREIKEGQTVKRTGSIVDVPVGK 101
Query: 151 INCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNLLSAGIKAVD 198
G+++ +G+ GK + Q ++RR +K + +S G+KA+D
Sbjct: 102 GLLGRVVDGLGNPIDGKGPI-------QSTERRRVDVKAPGIIPRKSVHEPMSTGLKAID 154
Query: 199 SLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGK 258
+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQKS +A
Sbjct: 155 ALIPVGRGQRELIIGDRQTGKTAIALDTILNQKSAHAGA--------------------- 193
Query: 259 HALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSAT 318
DE KLYC+YVAIGQKRSTVAQ VK L D GA+ Y+I+++AT
Sbjct: 194 ------------------DENAKLYCVYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAAT 235
Query: 319 ASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 378
ASDAAP+Q++AP++GCAMGE+FRDNG HA+I+YDDLSKQAVAYRQMSLLLRRPPGREAYP
Sbjct: 236 ASDAAPMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295
Query: 379 GDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 438
GDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+
Sbjct: 296 GDVFYLHSRLLERAAKMGDAAGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355
Query: 439 LFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPA 498
LFY+G +RPA
Sbjct: 356 LFYQG---------------------------------------------------VRPA 364
Query: 499 INVGLSVSRVGSAAQTRAMKQT-GKIR 524
+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 365 VNVGLSVSRVGSSAQTKAMKKVAGKIK 391
>sp|B7KUA4|ATPA_METC4 ATP synthase subunit alpha OS=Methylobacterium chloromethanicum
(strain CM4 / NCIMB 13688) GN=atpA PE=3 SV=1
Length = 509
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/507 (45%), Positives = 293/507 (57%), Gaps = 143/507 (28%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEA 101
RAAEIS+IL+E+I + G+EA +V ++L ++
Sbjct: 4 RAAEISAILKEQI------------------KNFGQEAEVTEV----GQVLAVGDGIARV 41
Query: 102 HGGGSLTALPVIETQAG-----------DVSAYIPTNVISITDGQIFLETELFYKVDRGS 150
+G ++ A ++E ++G +V I + I +GQ T V G
Sbjct: 42 YGLDNVQAGEMVEFESGVRGMALNLEQDNVGVVIFGSDREIKEGQTVKRTGSIVDVPVGK 101
Query: 151 INCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNLLSAGIKAVD 198
G+++ +G+ GK + Q ++RR +K + +S G+KA+D
Sbjct: 102 GLLGRVVDGLGNPIDGKGPI-------QSTERRRVDVKAPGIIPRKSVHEPMSTGLKAID 154
Query: 199 SLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGK 258
+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQKS +A
Sbjct: 155 ALIPVGRGQRELIIGDRQTGKTAIALDTILNQKSAHAGA--------------------- 193
Query: 259 HALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSAT 318
DE KLYC+YVAIGQKRSTVAQ VK L D GA+ Y+I+++AT
Sbjct: 194 ------------------DENAKLYCVYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAAT 235
Query: 319 ASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 378
ASDAAP+Q++AP++GCAMGE+FRDNG HA+I+YDDLSKQAVAYRQMSLLLRRPPGREAYP
Sbjct: 236 ASDAAPMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295
Query: 379 GDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 438
GDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+
Sbjct: 296 GDVFYLHSRLLERAAKMGDAAGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355
Query: 439 LFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPA 498
LFY+G +RPA
Sbjct: 356 LFYQG---------------------------------------------------VRPA 364
Query: 499 INVGLSVSRVGSAAQTRAMKQT-GKIR 524
+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 365 VNVGLSVSRVGSSAQTKAMKKVAGKIK 391
>sp|B8IN03|ATPA_METNO ATP synthase subunit alpha OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=atpA PE=3 SV=1
Length = 509
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 228/339 (67%), Gaps = 91/339 (26%)
Query: 187 YNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSG 246
+ ++ G+K+VD+L+PIGRGQRELIIGDRQTGKTA+A+DTI+NQK +
Sbjct: 143 HEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIALDTILNQKPAHEG---------- 192
Query: 247 CAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDS 306
DEK KLYC+YVA+GQKRSTVAQ VK L D+
Sbjct: 193 -----------------------------SDEKAKLYCVYVAVGQKRSTVAQFVKVLEDN 223
Query: 307 GAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSL 366
GA+ Y+I+++ATASD AP+Q+LAP+SGCAMGEFFRDNG HA+IIYDDLSKQAVAYRQMSL
Sbjct: 224 GALEYSIVIAATASDPAPMQFLAPFSGCAMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSL 283
Query: 367 LLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVI 426
LLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVI
Sbjct: 284 LLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVI 343
Query: 427 SITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLL 486
SITDGQIFLET+LFY+G
Sbjct: 344 SITDGQIFLETDLFYQG------------------------------------------- 360
Query: 487 GRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
+RPA+NVGLSVSRVGSAAQT+AMK+ GKI+
Sbjct: 361 --------VRPAVNVGLSVSRVGSAAQTKAMKKVAGKIK 391
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 87/95 (91%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AKM +A G GSLTALPVIETQA D
Sbjct: 274 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQAND 333
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLET+LFY+ R ++N G
Sbjct: 334 VSAYIPTNVISITDGQIFLETDLFYQGVRPAVNVG 368
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 50/61 (81%)
Query: 434 FLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDAL 493
+E E +GMALNLE DNVGVV+FG DR IKEG VKRTGAIVDVPVG+ LLGRVVDAL
Sbjct: 52 MVEFESGVRGMALNLEQDNVGVVIFGVDRDIKEGQTVKRTGAIVDVPVGKGLLGRVVDAL 111
Query: 494 G 494
G
Sbjct: 112 G 112
>sp|P05439|ATPA_RHOBL ATP synthase subunit alpha OS=Rhodopseudomonas blastica GN=atpA
PE=3 SV=1
Length = 512
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/336 (58%), Positives = 230/336 (68%), Gaps = 89/336 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
++ G+KAVD+++PIGRGQRELIIGDRQTGKTA+A+DTI+NQK
Sbjct: 146 MATGLKAVDAMIPIGRGQRELIIGDRQTGKTAVALDTILNQK------------------ 187
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
+Y+D A DE KKLYC+YVAIGQKRSTVAQ+VK+L ++GAM
Sbjct: 188 -------------VYND------AAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAM 228
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT++V+ATASD AP+Q+LAP+SG A+GEFFRDNG+HAL+IYDDLSKQAVAYRQMSLLLR
Sbjct: 229 AYTVVVAATASDPAPMQFLAPFSGTAIGEFFRDNGRHALMIYDDLSKQAVAYRQMSLLLR 288
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLERSAKM+ G GSLTALP+IETQAGD+SAYIPTNVISIT
Sbjct: 289 RPPGREAYPGDVFYLHSRLLERSAKMNGDFGAGSLTALPIIETQAGDISAYIPTNVISIT 348
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE+ELFY+G
Sbjct: 349 DGQIFLESELFYQG---------------------------------------------- 362
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
IRPA+N GLSVSRVGS+AQT AMK GK++
Sbjct: 363 -----IRPAVNTGLSVSRVGSSAQTSAMKSVAGKVK 393
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/95 (83%), Positives = 87/95 (91%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKM+ G GSLTALP+IETQAGD
Sbjct: 276 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMNGDFGAGSLTALPIIETQAGD 335
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
+SAYIPTNVISITDGQIFLE+ELFY+ R ++N G
Sbjct: 336 ISAYIPTNVISITDGQIFLESELFYQGIRPAVNTG 370
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
+GMALNLE DNVG+V+FG+DR IKEGD VKRT +IVDVP G LLGRVVDALG
Sbjct: 60 RGMALNLEVDNVGIVIFGDDRDIKEGDTVKRTKSIVDVPAGNGLLGRVVDALG 112
>sp|O50288|ATPA_RICPR ATP synthase subunit alpha OS=Rickettsia prowazekii (strain Madrid
E) GN=atpA PE=3 SV=2
Length = 512
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/331 (59%), Positives = 223/331 (67%), Gaps = 90/331 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ GIKA+DSL+PIGRGQRELIIGDRQTGKTA+A+DTIINQK
Sbjct: 146 VQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAVDTIINQKQ----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
H+L +E K+YCIYVAIGQKRS+VAQIVK+L D+GAM
Sbjct: 189 --------AHSLT--------------NESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAM 226
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTI+V ATAS+AA LQ++APYS C+MGE+FRDNG HALIIYDDLSK AVAYRQ+SLLLR
Sbjct: 227 DYTIVVLATASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLR 286
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AKMS+ GGGSLTALP+IETQAGDVSAYIPTNVISIT
Sbjct: 287 RPPGREAYPGDVFYLHSRLLERAAKMSKEKGGGSLTALPIIETQAGDVSAYIPTNVISIT 346
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLE++LFYKG
Sbjct: 347 DGQIFLESDLFYKG---------------------------------------------- 360
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT 520
IRPA+NVG+SVSRVGSAAQ +AMKQ
Sbjct: 361 -----IRPAVNVGISVSRVGSAAQIKAMKQV 386
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%)
Query: 61 AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDV 120
AVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AKMS+ GGGSLTALP+IETQAGDV
Sbjct: 275 AVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKMSKEKGGGSLTALPIIETQAGDV 334
Query: 121 SAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
SAYIPTNVISITDGQIFLE++LFYK R ++N G
Sbjct: 335 SAYIPTNVISITDGQIFLESDLFYKGIRPAVNVG 368
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KG+ LNLE D+VG V+ G+ +K+GD VKRT ++ V VG+ LLGR VDALG
Sbjct: 60 KGLILNLENDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKALLGRTVDALG 112
>sp|A5V3X3|ATPA_SPHWW ATP synthase subunit alpha OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=atpA PE=3 SV=1
Length = 509
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/489 (47%), Positives = 288/489 (58%), Gaps = 118/489 (24%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKMSE 100
RAAEIS ++ ++I +A Q+S + G+ GD + +H ++ +M E
Sbjct: 4 RAAEISKVIRDQIASFGSEA----QISEV-----GQVLSVGDGIARIHGLDNVQAGEMIE 54
Query: 101 AHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--I 158
G AL + +A +V A I + I +G + T V G G+++ +
Sbjct: 55 FSNGIKGMALNL---EADNVGAVIFGSDSQIKEGDVVKRTGTIVDVPVGKGLLGRVVDGL 111
Query: 159 GDRQTGKTALAIDTIINQKRKKRR--------RLLKYNLLSAGIKAVDSLVPIGRGQREL 210
G+ GK I+ ++R + R + + G+KA+D+LVP+GRGQREL
Sbjct: 112 GNPIDGKG-----PIVAEQRSRVEVKAPGIIPRKSVHEPVQTGLKALDALVPVGRGQREL 166
Query: 211 IIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQ 270
IIGDRQTGK+A+AIDT INQK+ A
Sbjct: 167 IIGDRQTGKSAVAIDTFINQKTANAG---------------------------------- 192
Query: 271 AVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAP 330
DE KKLYC+YVAIGQKRSTVAQ+VK L ++GAM Y+I+V+ATASD APLQYLAP
Sbjct: 193 -----TDESKKLYCVYVAIGQKRSTVAQLVKTLEENGAMEYSIVVAATASDPAPLQYLAP 247
Query: 331 YSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 390
Y+G AMGE+FRDNG H LI+YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE
Sbjct: 248 YTGVAMGEYFRDNGMHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 307
Query: 391 RSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEP 450
R+AK+++A+G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFLET+LFY+G
Sbjct: 308 RAAKLNDANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYQG------- 360
Query: 451 DNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGS 510
+RPAINVGLSVSRVGS
Sbjct: 361 --------------------------------------------VRPAINVGLSVSRVGS 376
Query: 511 AAQTRAMKQ 519
AAQT+AMK+
Sbjct: 377 AAQTKAMKK 385
>sp|B1LVH1|ATPA_METRJ ATP synthase subunit alpha OS=Methylobacterium radiotolerans
(strain ATCC 27329 / DSM 1819 / JCM 2831) GN=atpA PE=3
SV=1
Length = 510
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/507 (45%), Positives = 293/507 (57%), Gaps = 142/507 (28%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEA 101
RAAEIS+IL+++I + G EA +V ++L ++ A
Sbjct: 4 RAAEISAILKDQI------------------KNFGEEAEVSEV----GQVLSVGDGIARA 41
Query: 102 HGGGSLTALPVIETQAG-----------DVSAYIPTNVISITDGQIFLETELFYKVDRGS 150
+G ++ A ++E ++G +V I + I +GQ T V G
Sbjct: 42 YGLDNVQAGEMVEFESGVRGMALNLEQDNVGIVIFGSDREIKEGQTVKRTGAIVDVPVGK 101
Query: 151 INCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNLLSAGIKAVD 198
G+++ +G+ GK + Q ++RR +K + ++ G+KA+D
Sbjct: 102 GLLGRVVDALGNPIDGKGPI-------QSTERRRVDVKAPGIIPRKSVHEPMATGLKAID 154
Query: 199 SLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGK 258
+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQK + A
Sbjct: 155 ALIPVGRGQRELIIGDRQTGKTAIALDTILNQKPGHTAG--------------------- 193
Query: 259 HALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSAT 318
DEK KLYCIYVAIGQKRSTVAQ VK L D GA+ Y+I+++AT
Sbjct: 194 -----------------GDEKAKLYCIYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAAT 236
Query: 319 ASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 378
ASDAAP+Q++AP++GCAMGE+FRDNG HA+I+YDDLSKQAVAYRQMSLLLRRPPGREAYP
Sbjct: 237 ASDAAPMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 296
Query: 379 GDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 438
GDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+
Sbjct: 297 GDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 356
Query: 439 LFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPA 498
LFY+G +RPA
Sbjct: 357 LFYQG---------------------------------------------------VRPA 365
Query: 499 INVGLSVSRVGSAAQTRAMKQT-GKIR 524
+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 366 VNVGLSVSRVGSSAQTKAMKKVAGKIK 392
>sp|Q4FP36|ATPA_PELUB ATP synthase subunit alpha OS=Pelagibacter ubique (strain HTCC1062)
GN=atpA PE=3 SV=1
Length = 511
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/330 (59%), Positives = 221/330 (66%), Gaps = 90/330 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+K++DSLVP+GRGQRELIIGDRQTGKTA+AID II
Sbjct: 147 MQTGLKSIDSLVPVGRGQRELIIGDRQTGKTAVAIDAII--------------------- 185
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
+++ + DEK+KLYCIYVAIGQKRSTV QI K L ++GAM
Sbjct: 186 ------------------NQKKINESGDEKQKLYCIYVAIGQKRSTVRQIQKTLEEAGAM 227
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YT IV+ATASDAAPLQ+LAPY+GC MGE++RDNG HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 228 EYTTIVAATASDAAPLQFLAPYTGCTMGEYYRDNGMHALIIYDDLSKQAVAYRQMSLLLR 287
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AK+S+ HGGGSLTALP+IETQ GDVSA+IPTNVISIT
Sbjct: 288 RPPGREAYPGDVFYLHSRLLERAAKLSDEHGGGSLTALPIIETQGGDVSAFIPTNVISIT 347
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELF +G
Sbjct: 348 DGQIFLETELFNQG---------------------------------------------- 361
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQT+AMK+
Sbjct: 362 -----IRPAINVGLSVSRVGSAAQTKAMKK 386
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/97 (82%), Positives = 89/97 (91%)
Query: 58 APKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQA 117
+ +AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AK+S+ HGGGSLTALP+IETQ
Sbjct: 273 SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDEHGGGSLTALPIIETQG 332
Query: 118 GDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
GDVSA+IPTNVISITDGQIFLETELF + R +IN G
Sbjct: 333 GDVSAFIPTNVISITDGQIFLETELFNQGIRPAINVG 369
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 49/53 (92%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KGMALNLE +NVGVV+FG+DR IKEGD+VKRTG+IVD PVG++LLGRVVD LG
Sbjct: 60 KGMALNLESENVGVVIFGDDRKIKEGDVVKRTGSIVDTPVGKELLGRVVDGLG 112
>sp|B1ZEE9|ATPA_METPB ATP synthase subunit alpha OS=Methylobacterium populi (strain ATCC
BAA-705 / NCIMB 13946 / BJ001) GN=atpA PE=3 SV=1
Length = 509
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/507 (44%), Positives = 293/507 (57%), Gaps = 143/507 (28%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEA 101
RAAEIS+IL+E+I + G+EA +V ++L ++
Sbjct: 4 RAAEISAILKEQI------------------KNFGQEAEVTEV----GQVLAVGDGIARV 41
Query: 102 HGGGSLTALPVIETQAG-----------DVSAYIPTNVISITDGQIFLETELFYKVDRGS 150
+G ++ A ++E ++G +V I + I +GQ T V G
Sbjct: 42 YGLDNVQAGEMVEFESGVRGMALNLEQDNVGVVIFGSDREIKEGQTVKRTGAIVDVPVGK 101
Query: 151 INCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLK----------YNLLSAGIKAVD 198
G+++ +G+ GK + Q ++RR +K + ++ G+KA+D
Sbjct: 102 GLLGRVVDGLGNPIDGKGPI-------QSTERRRVDVKAPGIIPRKSVHEPMATGLKAID 154
Query: 199 SLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGK 258
+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQK +SG
Sbjct: 155 ALIPVGRGQRELIIGDRQTGKTAIALDTILNQKP----------AHSGT----------- 193
Query: 259 HALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSAT 318
DE KLYC+YVAIGQKRSTVAQ VK L D GA+ Y+I+++AT
Sbjct: 194 ------------------DENAKLYCVYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAAT 235
Query: 319 ASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 378
ASDAAP+Q++AP++GCAMGE+FRDNG HA+I+YDDLSKQAVAYRQMSLLLRRPPGREAYP
Sbjct: 236 ASDAAPMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295
Query: 379 GDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 438
GDVFYLHSRLLER+AKM +A G GSLTALPVIETQA DVSAYIPTNVISITDGQIFLET+
Sbjct: 296 GDVFYLHSRLLERAAKMGDAAGKGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355
Query: 439 LFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPA 498
LFY+G +RPA
Sbjct: 356 LFYQG---------------------------------------------------VRPA 364
Query: 499 INVGLSVSRVGSAAQTRAMKQT-GKIR 524
+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 365 VNVGLSVSRVGSSAQTKAMKKVAGKIK 391
>sp|Q5LNN9|ATPA_RUEPO ATP synthase subunit alpha OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=atpA PE=3 SV=1
Length = 512
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/328 (59%), Positives = 224/328 (68%), Gaps = 88/328 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
++ G+KAVDS++PIGRGQRELIIGDRQTGKTA+A+DTI+NQKS
Sbjct: 146 MATGLKAVDSMIPIGRGQRELIIGDRQTGKTAIALDTILNQKS----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Y+D A DE KKLYC+YVAIGQKRSTVAQ+VK+L ++GAM
Sbjct: 189 --------------YND------AAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEENGAM 228
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD AP+Q+LAPY+ AM E+FRDNG+HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 229 EYSIVVAATASDPAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLR 288
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLERSAK++E G GSLTALPVIETQ GDVSA+IPTNVISIT
Sbjct: 289 RPPGREAYPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISIT 348
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELFY+G
Sbjct: 349 DGQIFLETELFYQG---------------------------------------------- 362
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAM 517
IRPA+N GLSVSRVGS+AQT+AM
Sbjct: 363 -----IRPAVNTGLSVSRVGSSAQTKAM 385
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 87/95 (91%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAK++E G GSLTALPVIETQ GD
Sbjct: 276 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGD 335
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSA+IPTNVISITDGQIFLETELFY+ R ++N G
Sbjct: 336 VSAFIPTNVISITDGQIFLETELFYQGIRPAVNTG 370
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 443 GMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
GMALNLE DNVGVV+FG+DR IKEGD VKRT +IVDVP G++LLGRVVD LG
Sbjct: 61 GMALNLENDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPQGDELLGRVVDGLG 112
>sp|P37211|ATPA_NEUCR ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-1 PE=3 SV=1
Length = 551
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/503 (44%), Positives = 283/503 (56%), Gaps = 140/503 (27%)
Query: 39 ASSRAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKM 98
A + E+SSILE+RI G ++ S L R+L +
Sbjct: 42 AKATPTEVSSILEQRIRG-------VQEESNLAE---------------TGRVLSVGDGI 79
Query: 99 SEAHGGGSLTALPVIE-----------TQAGDVSAYIPTNVISITDGQIFLETELFYKVD 147
+ HG ++ A ++E +AG V + + + +G+ T V
Sbjct: 80 ARVHGMANVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVP 139
Query: 148 RGSINCGQLI--IGDRQTGKTALAIDTIINQKRKKRRRLLKYNLL---------SAGIKA 196
G G++I +G+ GK IN K K+R +L +L G+K+
Sbjct: 140 VGPELLGRVIDALGNPIDGKGP------INCKEKRRAQLKAPGILPRQSVNQPVQTGLKS 193
Query: 197 VDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDN 256
VD++VPIGRGQRELIIGDRQTGKTA+A+D I+NQK +
Sbjct: 194 VDAMVPIGRGQRELIIGDRQTGKTAVALDAILNQKRWNSG-------------------- 233
Query: 257 GKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVS 316
DE KKLYC+YVA+GQKRSTVAQ+VK L ++ AM Y+I+V+
Sbjct: 234 -------------------SDEDKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVA 274
Query: 317 ATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 376
ATAS+AAPLQYLAP++G +GE+FRDNGKH+L+I+DDL+KQAVAYRQMSLLLRRPPGREA
Sbjct: 275 ATASEAAPLQYLAPFTGACVGEYFRDNGKHSLVIFDDLTKQAVAYRQMSLLLRRPPGREA 334
Query: 377 YPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 436
YPGDVFYLHSRLLER+AKM++ HGGGS+TALPVIETQ GDVSAYIPTNVISITDGQIFLE
Sbjct: 335 YPGDVFYLHSRLLERAAKMNKTHGGGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLE 394
Query: 437 TELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIR 496
+ELFYKG +R
Sbjct: 395 SELFYKG---------------------------------------------------VR 403
Query: 497 PAINVGLSVSRVGSAAQTRAMKQ 519
PAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 404 PAINVGLSVSRVGSAAQLKAMKQ 426
>sp|A4WUM9|ATPA_RHOS5 ATP synthase subunit alpha OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpA PE=3 SV=1
Length = 512
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/493 (46%), Positives = 287/493 (58%), Gaps = 126/493 (25%)
Query: 42 RAAEISSILEERI--LGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKM 98
+AAEIS+IL+E+I G A + GR GD + +H ++ +M
Sbjct: 4 QAAEISAILKEQIKNFGQAAEVAEV-----------GRVLSVGDGIARVHGLDNVQAGEM 52
Query: 99 SEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI- 157
E GG AL + + +V I + SI +G T+ V G G+++
Sbjct: 53 VEFPGGIRGMALNL---EVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVD 109
Query: 158 -IGDRQTGKTALAIDTIINQKRKKRR-----------RLLKYNLLSAGIKAVDSLVPIGR 205
+G+ GK +A +RR R + ++ G+K+VD+++PIGR
Sbjct: 110 GLGNPIDGKGPIAA--------TERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGR 161
Query: 206 GQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYD 265
GQRELIIGDRQTGKTA+A+DTI+NQKS Y+
Sbjct: 162 GQRELIIGDRQTGKTAIALDTILNQKS-------------------------------YN 190
Query: 266 DLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPL 325
+ A DE KKLYCIYVAIGQKRSTVAQ+VK+L ++GA+ YT++V+ATASD AP+
Sbjct: 191 E------AAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIAYTLVVAATASDPAPM 244
Query: 326 QYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 385
Q+LAPY+ AM E+FRDNG+HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH
Sbjct: 245 QFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 304
Query: 386 SRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMA 445
SRLLERSAK+++ HG GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+G
Sbjct: 305 SRLLERSAKLNKEHGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQG-- 362
Query: 446 LNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSV 505
IRPA+N GLSV
Sbjct: 363 -------------------------------------------------IRPAVNTGLSV 373
Query: 506 SRVGSAAQTRAMK 518
SRVGS+AQT AMK
Sbjct: 374 SRVGSSAQTDAMK 386
>sp|Q28TJ8|ATPA_JANSC ATP synthase subunit alpha OS=Jannaschia sp. (strain CCS1) GN=atpA
PE=3 SV=1
Length = 512
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 226/328 (68%), Gaps = 88/328 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
++ G+KA+D+++P+GRGQRELIIGDRQTGKTA+A+DTI+NQKS
Sbjct: 146 MATGLKAIDAMIPVGRGQRELIIGDRQTGKTAVALDTILNQKS----------------- 188
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Y+D A DE KKLYCIYVA+GQKRSTVAQ+VK+L ++GA+
Sbjct: 189 --------------YND------AAGDDENKKLYCIYVAVGQKRSTVAQLVKKLEETGAI 228
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD AP+Q+LAPY+ AM EFFRDNG+HALI+YDDLSKQAV+YRQMSLLLR
Sbjct: 229 EYSIVVAATASDPAPMQFLAPYAATAMAEFFRDNGRHALIVYDDLSKQAVSYRQMSLLLR 288
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLERS+K++E +GGGSLTALPVIETQ GDVSA+IPTNVISIT
Sbjct: 289 RPPGREAYPGDVFYLHSRLLERSSKLNEDNGGGSLTALPVIETQGGDVSAFIPTNVISIT 348
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLETELF++G
Sbjct: 349 DGQIFLETELFFQG---------------------------------------------- 362
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAM 517
IRPA+N GLSVSRVGS+AQT+AM
Sbjct: 363 -----IRPAVNTGLSVSRVGSSAQTKAM 385
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 89/95 (93%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AV+YRQMSLLLRRPPGREAYPGDVFYLHSRLLERS+K++E +GGGSLTALPVIETQ GD
Sbjct: 276 QAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSSKLNEDNGGGSLTALPVIETQGGD 335
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSA+IPTNVISITDGQIFLETELF++ R ++N G
Sbjct: 336 VSAFIPTNVISITDGQIFLETELFFQGIRPAVNTG 370
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
+GMALNLE DNVGVV+FG+DR IKEGD VKRT +IVDVP G +LLGRVVD LG
Sbjct: 60 QGMALNLEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGNELLGRVVDGLG 112
>sp|B9KPI6|ATPA_RHOSK ATP synthase subunit alpha OS=Rhodobacter sphaeroides (strain KD131
/ KCTC 12085) GN=atpA PE=3 SV=1
Length = 512
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 286/491 (58%), Gaps = 122/491 (24%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKMSE 100
+AAEIS+IL+E+I +A GR GD + +H ++ +M E
Sbjct: 4 QAAEISAILKEQIKNFGQQAEVAEV---------GRVLSVGDGIARVHGLDNVQAGEMVE 54
Query: 101 AHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--I 158
GG AL + + +V I + SI +G T+ V G G+++ +
Sbjct: 55 FPGGIRGMALNL---EVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGL 111
Query: 159 GDRQTGKTALAIDTIINQKRKKRR-----------RLLKYNLLSAGIKAVDSLVPIGRGQ 207
G+ GK +A +RR R + ++ G+K+VD+++PIGRGQ
Sbjct: 112 GNPIDGKGPIAA--------TERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQ 163
Query: 208 RELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 267
RELIIGDRQTGKTA+A+DTI+NQKS Y++
Sbjct: 164 RELIIGDRQTGKTAIALDTILNQKS-------------------------------YNE- 191
Query: 268 SKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQY 327
A DE KKLYCIYVAIGQKRSTVAQ+VK+L ++GA+ YT++V+ATASD AP+Q+
Sbjct: 192 -----AAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIDYTLVVAATASDPAPMQF 246
Query: 328 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 387
LAPY+ AM E+FRDNG+HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 247 LAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 306
Query: 388 LLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALN 447
LLERSAK+++ HG GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+G
Sbjct: 307 LLERSAKLNKDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQG---- 362
Query: 448 LEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSR 507
IRPA+N GLSVSR
Sbjct: 363 -----------------------------------------------IRPAVNTGLSVSR 375
Query: 508 VGSAAQTRAMK 518
VGS+AQT AMK
Sbjct: 376 VGSSAQTDAMK 386
>sp|Q3J433|ATPA_RHOS4 ATP synthase subunit alpha OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpA PE=3 SV=1
Length = 512
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 286/491 (58%), Gaps = 122/491 (24%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKMSE 100
+AAEIS+IL+E+I +A GR GD + +H ++ +M E
Sbjct: 4 QAAEISAILKEQIKNFGQQAEVAEV---------GRVLSVGDGIARVHGLDNVQAGEMVE 54
Query: 101 AHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--I 158
GG AL + + +V I + SI +G T+ V G G+++ +
Sbjct: 55 FPGGIRGMALNL---EVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGL 111
Query: 159 GDRQTGKTALAIDTIINQKRKKRR-----------RLLKYNLLSAGIKAVDSLVPIGRGQ 207
G+ GK +A +RR R + ++ G+K+VD+++PIGRGQ
Sbjct: 112 GNPIDGKGPIAA--------TERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQ 163
Query: 208 RELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 267
RELIIGDRQTGKTA+A+DTI+NQKS Y++
Sbjct: 164 RELIIGDRQTGKTAIALDTILNQKS-------------------------------YNE- 191
Query: 268 SKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQY 327
A DE KKLYCIYVAIGQKRSTVAQ+VK+L ++GA+ YT++V+ATASD AP+Q+
Sbjct: 192 -----AAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIDYTLVVAATASDPAPMQF 246
Query: 328 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 387
LAPY+ AM E+FRDNG+HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 247 LAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 306
Query: 388 LLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALN 447
LLERSAK+++ HG GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+G
Sbjct: 307 LLERSAKLNKDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQG---- 362
Query: 448 LEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSR 507
IRPA+N GLSVSR
Sbjct: 363 -----------------------------------------------IRPAVNTGLSVSR 375
Query: 508 VGSAAQTRAMK 518
VGS+AQT AMK
Sbjct: 376 VGSSAQTDAMK 386
>sp|A3PIB7|ATPA1_RHOS1 ATP synthase subunit alpha 1 OS=Rhodobacter sphaeroides (strain
ATCC 17029 / ATH 2.4.9) GN=atpA1 PE=3 SV=1
Length = 512
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/491 (46%), Positives = 286/491 (58%), Gaps = 122/491 (24%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGD-VFYLHSRLLERSAKMSE 100
+AAEIS+IL+E+I +A GR GD + +H ++ +M E
Sbjct: 4 QAAEISAILKEQIKNFGQQAEVAEV---------GRVLSVGDGIARVHGLDNVQAGEMVE 54
Query: 101 AHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--I 158
GG AL + + +V I + SI +G T+ V G G+++ +
Sbjct: 55 FPGGIRGMALNL---EVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGL 111
Query: 159 GDRQTGKTALAIDTIINQKRKKRR-----------RLLKYNLLSAGIKAVDSLVPIGRGQ 207
G+ GK +A +RR R + ++ G+K+VD+++PIGRGQ
Sbjct: 112 GNPIDGKGPIAA--------TERRVADVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQ 163
Query: 208 RELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDL 267
RELIIGDRQTGKTA+A+DTI+NQKS Y++
Sbjct: 164 RELIIGDRQTGKTAIALDTILNQKS-------------------------------YNE- 191
Query: 268 SKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQY 327
A DE KKLYCIYVAIGQKRSTVAQ+VK+L ++GA+ YT++V+ATASD AP+Q+
Sbjct: 192 -----AAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIDYTLVVAATASDPAPMQF 246
Query: 328 LAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 387
LAPY+ AM E+FRDNG+HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
Sbjct: 247 LAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 306
Query: 388 LLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALN 447
LLERSAK+++ HG GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+G
Sbjct: 307 LLERSAKLNKDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQG---- 362
Query: 448 LEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSR 507
IRPA+N GLSVSR
Sbjct: 363 -----------------------------------------------IRPAVNTGLSVSR 375
Query: 508 VGSAAQTRAMK 518
VGS+AQT AMK
Sbjct: 376 VGSSAQTDAMK 386
>sp|P07251|ATPA_YEAST ATP synthase subunit alpha, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP1 PE=1
SV=5
Length = 545
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/528 (46%), Positives = 301/528 (57%), Gaps = 122/528 (23%)
Query: 6 ARLAA--ALAKNIPSSLNQANWAATQIASRKFNVSASSRAAEISSILEERILGSAPKAVA 63
AR AA +L++ + +S A AA +AS + S ++ E+SSILEERI G + +A
Sbjct: 3 ARTAAIRSLSRTLINSTKAARPAAAALASTRRLASTKAQPTEVSSILEERIKGVSDEANL 62
Query: 64 YRQMSLLLRRPPGREAYPGD----VFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
GR GD VF L++ E + S G +L P G
Sbjct: 63 NET---------GRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEP------GQ 107
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCGQLI--IGDRQTGKTALAIDTIINQK 177
V + + + +G++ T V G G+++ +G+ GK ID +
Sbjct: 108 VGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGP--IDAAGRSR 165
Query: 178 RKKR------RRLLKYNLLSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQK 231
+ + RR + + + G+KAVD+LVPIGRGQRELIIGDRQTGKTA+A+DTI+NQK
Sbjct: 166 AQVKAPGILPRRSV-HEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQK 224
Query: 232 SIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQ 291
+NG DE KKLYC+YVA+GQ
Sbjct: 225 RW---------------------NNGS------------------DESKKLYCVYVAVGQ 245
Query: 292 KRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIY 351
KRSTVAQ+V+ L AM Y+IIV+ATAS+AAPLQYLAP++ ++GE+FRDNGKHALI+Y
Sbjct: 246 KRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVY 305
Query: 352 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIE 411
DDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLER+AK+SE G GSLTALPVIE
Sbjct: 306 DDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIE 365
Query: 412 TQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVK 471
TQ GDVSAYIPTNVISITDGQIFLE ELFYKG
Sbjct: 366 TQGGDVSAYIPTNVISITDGQIFLEAELFYKG---------------------------- 397
Query: 472 RTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +A+KQ
Sbjct: 398 -----------------------IRPAINVGLSVSRVGSAAQVKALKQ 422
>sp|Q0AKV8|ATPA_MARMM ATP synthase subunit alpha OS=Maricaulis maris (strain MCS10)
GN=atpA PE=3 SV=1
Length = 510
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 228/336 (67%), Gaps = 91/336 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
++ GIKA+D+++P+GRGQRELIIGDRQTGKTA+A+DTI
Sbjct: 147 MATGIKAIDAMIPVGRGQRELIIGDRQTGKTAIALDTI---------------------- 184
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
L+++A+ DE KLYCIYVA+GQKRSTVAQIVK L ++GA+
Sbjct: 185 -----------------LNQKAINEGDDESAKLYCIYVAVGQKRSTVAQIVKTLEENGAL 227
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
YTIIV+ATASD AP+Q+LAP++ CAM E+FRDNG HALI+YDDLSKQAVAYRQMSLLLR
Sbjct: 228 DYTIIVAATASDPAPMQFLAPFTACAMAEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLR 287
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREAYPGDVFYLHSRLLER+AK++EA+G GS+TALP+IETQA DVSAYIPTNVISIT
Sbjct: 288 RPPGREAYPGDVFYLHSRLLERAAKLNEANGSGSMTALPIIETQANDVSAYIPTNVISIT 347
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQIFLET+LFY+G
Sbjct: 348 DGQIFLETDLFYQG---------------------------------------------- 361
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
IRPA+NVGLSVSRVGSAAQT+AMKQ GK++
Sbjct: 362 -----IRPAVNVGLSVSRVGSAAQTKAMKQVAGKMK 392
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 89/95 (93%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AK++EA+G GS+TALP+IETQA D
Sbjct: 275 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNEANGSGSMTALPIIETQAND 334
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLET+LFY+ R ++N G
Sbjct: 335 VSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVG 369
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 44/53 (83%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALG 494
KGMALNLE DNVG V+FG+DR IKEGD VKR G+IVD VG+ LLGRVVD LG
Sbjct: 60 KGMALNLERDNVGCVIFGDDRGIKEGDTVKRLGSIVDTSVGKGLLGRVVDGLG 112
>sp|Q21CY5|ATPA_RHOPB ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain
BisB18) GN=atpA PE=3 SV=1
Length = 510
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/338 (56%), Positives = 228/338 (67%), Gaps = 94/338 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQK--SIYAAPLQYLAPYSGC 247
++ G+KA+D+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQK ++ AP
Sbjct: 146 MATGLKAIDALIPVGRGQRELIIGDRQTGKTAIALDTILNQKPLNVEGAP---------- 195
Query: 248 AMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSG 307
E +KLYC+YVAIGQKRSTVAQ VK L + G
Sbjct: 196 ------------------------------EGQKLYCVYVAIGQKRSTVAQFVKVLEEQG 225
Query: 308 AMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLL 367
A+ Y+I+V+ATASD AP+QY+AP++GC MGE+FRDNG HA+IIYDDLSKQAVAYRQMSLL
Sbjct: 226 ALEYSIVVAATASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLL 285
Query: 368 LRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVIS 427
LRRPPGREAYPGDVFYLHSRLLER+AK++E HG GSLTALP+IETQA DVSAYIPTNVIS
Sbjct: 286 LRRPPGREAYPGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQANDVSAYIPTNVIS 345
Query: 428 ITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLG 487
ITDGQIFLET+LF++G
Sbjct: 346 ITDGQIFLETDLFFQG-------------------------------------------- 361
Query: 488 RVVDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
IRPA+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 362 -------IRPAVNVGLSVSRVGSSAQTKAMKKVAGKIK 392
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 88/95 (92%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AK++E HG GSLTALP+IETQA D
Sbjct: 275 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQAND 334
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLET+LF++ R ++N G
Sbjct: 335 VSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVG 369
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 48/61 (78%)
Query: 434 FLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDAL 493
+E E +GMALNLE DNVG+V+FG DR IKEG VKRT AIVD PVG+ LLGRVVDAL
Sbjct: 52 MVEFENGTRGMALNLETDNVGIVIFGADREIKEGQTVKRTRAIVDTPVGKGLLGRVVDAL 111
Query: 494 G 494
G
Sbjct: 112 G 112
>sp|P0C522|ATPAM_ORYSJ ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp.
japonica GN=ATPA PE=1 SV=1
Length = 509
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/330 (59%), Positives = 221/330 (66%), Gaps = 89/330 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQK
Sbjct: 148 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK------------------ 189
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Q + +E + LYC+YVAIGQKRSTVAQ+V+ L+++ A+
Sbjct: 190 --------------------QMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANAL 229
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 230 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 289
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 290 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 349
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQI LETELFY+G
Sbjct: 350 DGQICLETELFYRG---------------------------------------------- 363
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 364 -----IRPAINVGLSVSRVGSAAQLKAMKQ 388
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 86/95 (90%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGD
Sbjct: 277 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 336
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQI LETELFY+ R +IN G
Sbjct: 337 VSAYIPTNVISITDGQICLETELFYRGIRPAINVG 371
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 155 QLIIGDRQTGKTALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSL--VPIGRGQRELII 212
+LIIGDRQTGKTA+AIDTI+NQK+ R G ++L V + GQ+ +
Sbjct: 167 ELIIGDRQTGKTAIAIDTILNQKQMNSR----------GTNESETLYCVYVAIGQKRSTV 216
Query: 213 GDRQ---TGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSK 269
+ AL ++ + APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSK
Sbjct: 217 AQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 276
Query: 270 QAVAYRQ 276
QAVAYRQ
Sbjct: 277 QAVAYRQ 283
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KG+ALNLE +NVG+VVFG+D IKEGD+VKRTG+IVDVP G+ +LGRVVDALG+
Sbjct: 62 KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGV 115
>sp|P0C521|ATPAM_ORYSI ATP synthase subunit alpha, mitochondrial OS=Oryza sativa subsp.
indica GN=ATPA PE=2 SV=1
Length = 509
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/330 (59%), Positives = 221/330 (66%), Gaps = 89/330 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQK
Sbjct: 148 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK------------------ 189
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Q + +E + LYC+YVAIGQKRSTVAQ+V+ L+++ A+
Sbjct: 190 --------------------QMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANAL 229
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 230 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 289
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 290 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 349
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQI LETELFY+G
Sbjct: 350 DGQICLETELFYRG---------------------------------------------- 363
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 364 -----IRPAINVGLSVSRVGSAAQLKAMKQ 388
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 86/95 (90%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGD
Sbjct: 277 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 336
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQI LETELFY+ R +IN G
Sbjct: 337 VSAYIPTNVISITDGQICLETELFYRGIRPAINVG 371
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 155 QLIIGDRQTGKTALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSL--VPIGRGQRELII 212
+LIIGDRQTGKTA+AIDTI+NQK+ R G ++L V + GQ+ +
Sbjct: 167 ELIIGDRQTGKTAIAIDTILNQKQMNSR----------GTNESETLYCVYVAIGQKRSTV 216
Query: 213 GDRQ---TGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSK 269
+ AL ++ + APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSK
Sbjct: 217 AQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 276
Query: 270 QAVAYRQ 276
QAVAYRQ
Sbjct: 277 QAVAYRQ 283
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KG+ALNLE +NVG+VVFG+D IKEGD+VKRTG+IVDVP G+ +LGRVVDALG+
Sbjct: 62 KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGV 115
>sp|P0C520|ATPAM_ORYSA ATP synthase subunit alpha, mitochondrial OS=Oryza sativa GN=ATPA
PE=2 SV=1
Length = 509
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/330 (59%), Positives = 221/330 (66%), Gaps = 89/330 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQK
Sbjct: 148 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK------------------ 189
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
Q + +E + LYC+YVAIGQKRSTVAQ+V+ L+++ A+
Sbjct: 190 --------------------QMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANAL 229
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 230 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 289
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 290 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 349
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQI LETELFY+G
Sbjct: 350 DGQICLETELFYRG---------------------------------------------- 363
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 364 -----IRPAINVGLSVSRVGSAAQLKAMKQ 388
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 86/95 (90%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGD
Sbjct: 277 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 336
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQI LETELFY+ R +IN G
Sbjct: 337 VSAYIPTNVISITDGQICLETELFYRGIRPAINVG 371
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 15/127 (11%)
Query: 155 QLIIGDRQTGKTALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSL--VPIGRGQRELII 212
+LIIGDRQTGKTA+AIDTI+NQK+ R G ++L V + GQ+ +
Sbjct: 167 ELIIGDRQTGKTAIAIDTILNQKQMNSR----------GTNESETLYCVYVAIGQKRSTV 216
Query: 213 GDRQ---TGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSK 269
+ AL ++ + APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSK
Sbjct: 217 AQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 276
Query: 270 QAVAYRQ 276
QAVAYRQ
Sbjct: 277 QAVAYRQ 283
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KG+ALNLE +NVG+VVFG+D IKEGD+VKRTG+IVDVP G+ +LGRVVDALG+
Sbjct: 62 KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGV 115
>sp|A8LJR6|ATPA2_DINSH ATP synthase subunit alpha 2 OS=Dinoroseobacter shibae (strain DFL
12) GN=atpA2 PE=3 SV=1
Length = 512
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/495 (45%), Positives = 287/495 (57%), Gaps = 130/495 (26%)
Query: 42 RAAEISSILEERILGSAPKAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEA 101
+AAEIS+IL+E+I + G+EA +V R+L ++
Sbjct: 4 QAAEISAILKEQI------------------KNFGQEAEVAEV----GRVLSVGDGIARV 41
Query: 102 HGGGSLTALPVIETQAG-----------DVSAYIPTNVISITDGQIFLETELFYKVDRGS 150
HG ++ A ++E G +V I + I +G I T+ V G
Sbjct: 42 HGLDNVQAGEMVEFPGGIRGMALNLEIDNVGVVIFGSDRDIKEGDIVKRTKSIVDVPVGD 101
Query: 151 INCGQLI--IGDRQTGK-----TALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSLVPI 203
G+++ +G+ GK T +I + R+ + + ++ G+K+VD+++PI
Sbjct: 102 ALLGRVVDGLGNPLDGKGPIETTERSIADVKAPGIIPRKSV--HEPMATGLKSVDAMIPI 159
Query: 204 GRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALII 263
GRGQRELIIGDRQTGKTA+A+DTI+NQK+
Sbjct: 160 GRGQRELIIGDRQTGKTAVALDTILNQKA------------------------------- 188
Query: 264 YDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAA 323
Y+D A DE KKLYC+YVA+GQKRSTVAQ+VK+L ++GA+ Y+I+V+ATASD A
Sbjct: 189 YND------AAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASDPA 242
Query: 324 PLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 383
P+Q+LAPY+ +M EFFRDNG+HALIIYDDLSKQAV+YRQMSLLLRRPPGREAYPGDVFY
Sbjct: 243 PMQFLAPYAATSMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDVFY 302
Query: 384 LHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 443
LHSRLLERSAK+ + HG GSLTALP+IETQ GDVSA+IPTNVISITDGQIFLETELFY+G
Sbjct: 303 LHSRLLERSAKLGDDHGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQG 362
Query: 444 MALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGL 503
IRPA+N GL
Sbjct: 363 ---------------------------------------------------IRPAVNTGL 371
Query: 504 SVSRVGSAAQTRAMK 518
SVSRVGS+AQT AMK
Sbjct: 372 SVSRVGSSAQTNAMK 386
>sp|Q13DP4|ATPA_RHOPS ATP synthase subunit alpha OS=Rhodopseudomonas palustris (strain
BisB5) GN=atpA PE=3 SV=1
Length = 510
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/338 (56%), Positives = 228/338 (67%), Gaps = 94/338 (27%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQK--SIYAAPLQYLAPYSGC 247
++ G+KA+D+L+P+GRGQRELIIGDRQTGKTA+A+DTI+NQK ++ AP
Sbjct: 146 MATGLKAIDALIPVGRGQRELIIGDRQTGKTAIALDTILNQKPLNVEGAP---------- 195
Query: 248 AMGEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSG 307
E +KLYC+YVA+GQKRSTVAQ VK L + G
Sbjct: 196 ------------------------------EGQKLYCVYVAVGQKRSTVAQFVKVLEEQG 225
Query: 308 AMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLL 367
A+ Y+I+V+ATASD AP+QY+AP++GC MGE+FRDNG HA+IIYDDLSKQAVAYRQMSLL
Sbjct: 226 ALEYSIVVAATASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLL 285
Query: 368 LRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVIS 427
LRRPPGREAYPGDVFYLHSRLLER+AK++E HG GSLTALP+IETQA DVSAYIPTNVIS
Sbjct: 286 LRRPPGREAYPGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQANDVSAYIPTNVIS 345
Query: 428 ITDGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLG 487
ITDGQIFLET+LF++G
Sbjct: 346 ITDGQIFLETDLFFQG-------------------------------------------- 361
Query: 488 RVVDALGIRPAINVGLSVSRVGSAAQTRAMKQT-GKIR 524
IRPA+NVGLSVSRVGS+AQT+AMK+ GKI+
Sbjct: 362 -------IRPAVNVGLSVSRVGSSAQTKAMKKVAGKIK 392
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/95 (82%), Positives = 88/95 (92%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER+AK++E HG GSLTALP+IETQA D
Sbjct: 275 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQAND 334
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQIFLET+LF++ R ++N G
Sbjct: 335 VSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVG 369
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 48/61 (78%)
Query: 434 FLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDAL 493
+E E +GMALNLE DNVG+V+FG DR IKEG VKRT +IVD PVG+ LLGRVVDAL
Sbjct: 52 MVEFENGTRGMALNLETDNVGIVIFGADREIKEGQTVKRTRSIVDTPVGKGLLGRVVDAL 111
Query: 494 G 494
G
Sbjct: 112 G 112
>sp|P05492|ATPAM_OENBI ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis
GN=ATPA PE=3 SV=1
Length = 511
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/367 (55%), Positives = 233/367 (63%), Gaps = 96/367 (26%)
Query: 154 GQLIIGDRQTGKTALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSLVPIGRGQRELIIG 213
G+ +GD + + + + II +K + + G+KAVDSLVPIGRGQRELIIG
Sbjct: 119 GRGALGDHERRRVEVKVPGIIERKSV-------HEPMQTGLKAVDSLVPIGRGQRELIIG 171
Query: 214 DRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVA 273
DRQTGKTA+AIDTI+NQK Q +
Sbjct: 172 DRQTGKTAIAIDTILNQK--------------------------------------QMNS 193
Query: 274 YRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSG 333
E + LYC+YVAIGQKRSTVAQ+V+ L++ A+ Y+I+V+ATASD APLQ+LAPYSG
Sbjct: 194 RATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSG 253
Query: 334 CAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSA 393
CAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+A
Sbjct: 254 CAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAA 313
Query: 394 KMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGMALNLEPDNV 453
K S+ G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+G
Sbjct: 314 KRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRG---------- 363
Query: 454 GVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGIRPAINVGLSVSRVGSAAQ 513
IRPAINVGLSVSRVGSAAQ
Sbjct: 364 -----------------------------------------IRPAINVGLSVSRVGSAAQ 382
Query: 514 TRAMKQT 520
+AMKQ
Sbjct: 383 LKAMKQV 389
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 86/95 (90%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGD
Sbjct: 277 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 336
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQI LETELFY+ R +IN G
Sbjct: 337 VSAYIPTNVISITDGQICLETELFYRGIRPAINVG 371
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 49/54 (90%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KG+ALNLE +NVG+VVFG+D IKEGD+VKRTG+IVDVP G+ LLGRVVDALG+
Sbjct: 62 KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGV 115
>sp|Q06735|ATPAM_BETVU ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris GN=ATPA
PE=3 SV=1
Length = 506
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/330 (59%), Positives = 221/330 (66%), Gaps = 89/330 (26%)
Query: 190 LSAGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKSIYAAPLQYLAPYSGCAM 249
+ G+KAVDSLVPIGRGQRELIIGDRQTGKTA+AIDTI+NQK +
Sbjct: 148 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQL---------------- 191
Query: 250 GEFFRDNGKHALIIYDDLSKQAVAYRQDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAM 309
N K E + LYC+YVA+GQKRSTVAQ+V+ L+++ A+
Sbjct: 192 ------NSKAT----------------SESETLYCVYVAVGQKRSTVAQLVQILSEANAL 229
Query: 310 GYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLR 369
Y+I+V+ATASD APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLR
Sbjct: 230 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 289
Query: 370 RPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISIT 429
RPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGDVSAYIPTNVISIT
Sbjct: 290 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 349
Query: 430 DGQIFLETELFYKGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRV 489
DGQI LETELFY+G
Sbjct: 350 DGQICLETELFYRG---------------------------------------------- 363
Query: 490 VDALGIRPAINVGLSVSRVGSAAQTRAMKQ 519
IRPAINVGLSVSRVGSAAQ +AMKQ
Sbjct: 364 -----IRPAINVGLSVSRVGSAAQLKAMKQ 388
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 86/95 (90%)
Query: 60 KAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKMSEAHGGGSLTALPVIETQAGD 119
+AVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLER+AK S+ G GSLTALPVIETQAGD
Sbjct: 277 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 336
Query: 120 VSAYIPTNVISITDGQIFLETELFYKVDRGSINCG 154
VSAYIPTNVISITDGQI LETELFY+ R +IN G
Sbjct: 337 VSAYIPTNVISITDGQICLETELFYRGIRPAINVG 371
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 79/125 (63%), Gaps = 11/125 (8%)
Query: 155 QLIIGDRQTGKTALAIDTIINQKRKKRRRLLKYNLLSAGIKAVDSLVPIGRGQRELIIGD 214
+LIIGDRQTGKTA+AIDTI+NQK+ + + L AV GQ+ +
Sbjct: 167 ELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAV--------GQKRSTVAQ 218
Query: 215 RQ---TGKTALAIDTIINQKSIYAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQA 271
+ AL ++ + APLQ+LAPYSGCAMGE+FRDNG HALIIYDDLSKQA
Sbjct: 219 LVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 278
Query: 272 VAYRQ 276
VAYRQ
Sbjct: 279 VAYRQ 283
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 442 KGMALNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEDLLGRVVDALGI 495
KG+ALNLE +NVG+VVFG+D IKEGD+VKRTG+IVDVP G+ +LGRVVDALG+
Sbjct: 62 KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGV 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,976,120
Number of Sequences: 539616
Number of extensions: 7921266
Number of successful extensions: 34883
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1982
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 23083
Number of HSP's gapped (non-prelim): 10147
length of query: 539
length of database: 191,569,459
effective HSP length: 122
effective length of query: 417
effective length of database: 125,736,307
effective search space: 52432040019
effective search space used: 52432040019
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)