BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy13777
         (121 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|124487982|gb|ABN12074.1| putative mitochondrial ATP synthase alpha subunit precursor
           [Maconellicoccus hirsutus]
          Length = 459

 Score =  228 bits (580), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/120 (91%), Positives = 114/120 (95%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 339 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 398

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDKLDPAKIT FEKEFL H+K+SE+ LL+ I KEGKITE TDAKLKTVVTNFLANFT
Sbjct: 399 RGHLDKLDPAKITAFEKEFLQHVKTSEKALLQDIAKEGKITEATDAKLKTVVTNFLANFT 458


>gi|193666827|ref|XP_001943349.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 551

 Score =  220 bits (561), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 105/120 (87%), Positives = 114/120 (95%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAV+YCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVVYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK++P+KITTFEKEFL HIK+SE+ LLESI KEGKI++DTDAKLKTVV NFLA+F 
Sbjct: 491 RGFLDKMEPSKITTFEKEFLQHIKTSEKSLLESIAKEGKISDDTDAKLKTVVNNFLASFN 550


>gi|52630965|gb|AAU84946.1| putative mitochondrial ATP synthase alpha subunit precursor
           [Toxoptera citricida]
          Length = 551

 Score =  220 bits (561), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 105/120 (87%), Positives = 115/120 (95%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAV+YCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVVYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK++P+KITTFEKEFL HIK+SE+ LLESI KEGKIT++TDAKLK+VVTNFLA+F 
Sbjct: 491 RGFLDKMEPSKITTFEKEFLQHIKTSEKSLLESIAKEGKITDETDAKLKSVVTNFLASFN 550


>gi|242012578|ref|XP_002427008.1| ATP synthase subunit alpha, putative [Pediculus humanus corporis]
 gi|212511246|gb|EEB14270.1| ATP synthase subunit alpha, putative [Pediculus humanus corporis]
          Length = 552

 Score =  215 bits (547), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDKLDP+KIT FEKEFLAH+KSS + LL++I KE KI+E  DAKLK +VT+F+ +F+
Sbjct: 492 RGHLDKLDPSKITAFEKEFLAHVKSSHKDLLDTIAKENKISEAVDAKLKKIVTDFIGSFS 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|195430526|ref|XP_002063305.1| GK21455 [Drosophila willistoni]
 gi|194159390|gb|EDW74291.1| GK21455 [Drosophila willistoni]
          Length = 552

 Score =  214 bits (545), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM+IE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK++E+GLL++I KEGKI++  DAKLK VVT F+A F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTTEQGLLDTIAKEGKISDAADAKLKDVVTKFMATFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|332374868|gb|AEE62575.1| unknown [Dendroctonus ponderosae]
          Length = 551

 Score =  214 bits (545), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVA+IYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAIIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DP+KIT FEK+F  HIKSS + +L+SI KEGKIT+ TDA+LK VV +FLANF+
Sbjct: 491 RGHLDKVDPSKITVFEKQFSEHIKSSHQSILQSIAKEGKITDSTDAELKKVVQDFLANFS 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|195029787|ref|XP_001987753.1| GH19785 [Drosophila grimshawi]
 gi|193903753|gb|EDW02620.1| GH19785 [Drosophila grimshawi]
          Length = 550

 Score =  214 bits (544), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 111/121 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 430 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+GLL+SI KEG+I+   DAKLK +VT F++ F 
Sbjct: 490 RGHLDKMDPAKITKFEKEFLQHIKTSEQGLLDSIAKEGQISPAVDAKLKDIVTKFMSTFQ 549

Query: 121 G 121
           G
Sbjct: 550 G 550


>gi|312370923|gb|EFR19222.1| hypothetical protein AND_22861 [Anopheles darlingi]
          Length = 551

 Score =  214 bits (544), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 114/121 (94%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP+KIT FE+EFLAH+K++E+ LL+ I  EGKI++D DAKLK++VT+F++ F+
Sbjct: 491 RGYLDKMDPSKITKFEREFLAHVKTNEKALLQQIASEGKISDDADAKLKSIVTSFMSTFS 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|58385536|ref|XP_314018.2| AGAP005134-PA [Anopheles gambiae str. PEST]
 gi|55240520|gb|EAA44524.2| AGAP005134-PA [Anopheles gambiae str. PEST]
          Length = 551

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 113/120 (94%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP+KIT FE+EFLAH+K++E+ LL+ I  EGKI++D DAKLK+VVT+F++ F+
Sbjct: 491 RGYLDKMDPSKITKFEREFLAHVKTNEKALLQQIASEGKISDDADAKLKSVVTSFMSTFS 550


>gi|289742845|gb|ADD20170.1| F0F1-type ATP synthase alpha subunit [Glossina morsitans morsitans]
          Length = 552

 Score =  211 bits (538), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/121 (83%), Positives = 109/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM+IE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL  I +EGKI+E  DAKLK VVT FL+ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQSLLSQIAQEGKISEGADAKLKEVVTKFLSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|91087467|ref|XP_966334.1| PREDICTED: similar to AGAP005134-PA isoform 1 [Tribolium castaneum]
 gi|270010980|gb|EFA07428.1| hypothetical protein TcasGA2_TC008728 [Tribolium castaneum]
          Length = 551

 Score =  210 bits (535), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 113/121 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDKLDP+KIT FEKEF  H+K++ + +L+SI KEGKIT++TDA+LK +V++F++ F+
Sbjct: 491 RGHLDKLDPSKITVFEKEFSQHVKTNHQAVLQSIAKEGKITDETDAQLKKIVSDFISTFS 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|195585815|ref|XP_002082674.1| GD11704 [Drosophila simulans]
 gi|194194683|gb|EDX08259.1| GD11704 [Drosophila simulans]
          Length = 479

 Score =  210 bits (535), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 359 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 418

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V  F++ F 
Sbjct: 419 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISESSDAKLKDIVAKFMSTFQ 478

Query: 121 G 121
           G
Sbjct: 479 G 479


>gi|114052278|ref|NP_001040233.1| ATP synthase [Bombyx mori]
 gi|87248463|gb|ABD36284.1| ATP synthase [Bombyx mori]
          Length = 553

 Score =  210 bits (534), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/120 (81%), Positives = 110/120 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIEEQVA+IYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDKLDP+KIT FEKEF  HIK+S +GLL +I K+G+IT ++DA LK +VT+FLA FT
Sbjct: 491 RGHLDKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATFT 550


>gi|195346855|ref|XP_002039970.1| GM15951 [Drosophila sechellia]
 gi|194135319|gb|EDW56835.1| GM15951 [Drosophila sechellia]
          Length = 552

 Score =  209 bits (533), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V  F++ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISESSDAKLKDIVAKFMSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|157131648|ref|XP_001655906.1| ATP synthase alpha subunit mitochondrial [Aedes aegypti]
 gi|94468442|gb|ABF18070.1| mitochondrial ATP synthase alpha subunit [Aedes aegypti]
 gi|108871446|gb|EAT35671.1| AAEL012175-PA [Aedes aegypti]
          Length = 551

 Score =  209 bits (533), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 113/121 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP+KIT FE+EFLAH+K++E+ LL  I  +GKI+++T+AKLK VVT+F++ F+
Sbjct: 491 RGYLDKMDPSKITAFEREFLAHVKTNEKALLSQIATDGKISDETEAKLKNVVTSFMSTFS 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|170032139|ref|XP_001843940.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167871889|gb|EDS35272.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 551

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 113/121 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK+DP KIT FE+EFLAH+K++E+ LL++I  EGKI+++T+AKLK +VT+F++ F+
Sbjct: 491 RGFLDKMDPGKITAFEREFLAHVKTNEKALLQTIASEGKISDETEAKLKGIVTSFMSTFS 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|195121302|ref|XP_002005159.1| GI20326 [Drosophila mojavensis]
 gi|193910227|gb|EDW09094.1| GI20326 [Drosophila mojavensis]
          Length = 550

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM+IE+QVAVIYCGV
Sbjct: 430 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSIEDQVAVIYCGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DP+KIT FEKEFL HIK+SE+GLL+ I KEG+I+E  DAKLK +V  F++ F 
Sbjct: 490 RGHLDKMDPSKITKFEKEFLQHIKTSEQGLLDGIAKEGQISEAADAKLKDIVQKFMSTFQ 549

Query: 121 G 121
           G
Sbjct: 550 G 550


>gi|194757070|ref|XP_001960788.1| GF13537 [Drosophila ananassae]
 gi|190622086|gb|EDV37610.1| GF13537 [Drosophila ananassae]
          Length = 552

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 111/121 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM+IE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G+I+E +DAKLK VV  FL+ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGQISEASDAKLKDVVGKFLSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|340716499|ref|XP_003396735.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Bombus
           terrestris]
          Length = 547

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 427 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P KIT FEKEFLAHI++S+R LL +I K+  I+E +DAKLK VVT+FLA+F+
Sbjct: 487 RGYLDKMEPTKITAFEKEFLAHIRTSQRDLLNTIAKDNTISEASDAKLKQVVTDFLASFS 546

Query: 121 G 121
           G
Sbjct: 547 G 547


>gi|24658560|ref|NP_726243.1| bellwether [Drosophila melanogaster]
 gi|5921205|sp|P35381.2|ATPA_DROME RecName: Full=ATP synthase subunit alpha, mitochondrial; AltName:
           Full=Protein bellwether; Flags: Precursor
 gi|1556392|emb|CAA69202.1| mitochondrial ATP synthase alpha subunit precursor [Drosophila
           melanogaster]
 gi|7291477|gb|AAF46903.1| bellwether [Drosophila melanogaster]
 gi|28317168|gb|AAO39595.1| HL08087p [Drosophila melanogaster]
 gi|220947264|gb|ACL86175.1| blw-PA [synthetic construct]
 gi|220956710|gb|ACL90898.1| blw-PA [synthetic construct]
          Length = 552

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V  F++ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|195488017|ref|XP_002092136.1| GE14023 [Drosophila yakuba]
 gi|194178237|gb|EDW91848.1| GE14023 [Drosophila yakuba]
          Length = 552

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V  F++ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|194884562|ref|XP_001976293.1| GG22793 [Drosophila erecta]
 gi|190659480|gb|EDV56693.1| GG22793 [Drosophila erecta]
          Length = 552

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAKIT FEKEFL HIK+SE+ LL++I K+G I+E +DAKLK +V  F++ F 
Sbjct: 492 RGHLDKMDPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|48100966|ref|XP_392639.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Apis mellifera]
          Length = 547

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 427 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P KIT FEKEFLAHI++S+R LL +I K+  I+E +DAKLK VVT+FLA+F+
Sbjct: 487 RGYLDKMEPTKITAFEKEFLAHIRTSQRDLLNTIAKDNTISEASDAKLKQVVTDFLASFS 546

Query: 121 G 121
           G
Sbjct: 547 G 547


>gi|380027725|ref|XP_003697569.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Apis
           florea]
          Length = 526

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 406 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 465

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P KIT FEKEFLAHI++S+R LL +I K+  I+E +DAKLK VVT+FLA+F+
Sbjct: 466 RGYLDKMEPTKITAFEKEFLAHIRTSQRDLLNTIAKDNTISEASDAKLKQVVTDFLASFS 525

Query: 121 G 121
           G
Sbjct: 526 G 526


>gi|383860333|ref|XP_003705645.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 1
           [Megachile rotundata]
          Length = 547

 Score =  208 bits (530), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 427 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P KIT FEKEFLAHI++++R LL +I KE  I+E +DAKLK VVT+FLA+F+
Sbjct: 487 RGYLDKMEPTKITAFEKEFLAHIRANQRDLLNTIAKENTISEASDAKLKQVVTDFLASFS 546

Query: 121 G 121
           G
Sbjct: 547 G 547


>gi|383860335|ref|XP_003705646.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 2
           [Megachile rotundata]
          Length = 549

 Score =  208 bits (530), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 112/121 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 429 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P KIT FEKEFLAHI++++R LL +I KE  I+E +DAKLK VVT+FLA+F+
Sbjct: 489 RGYLDKMEPTKITAFEKEFLAHIRANQRDLLNTIAKENTISEASDAKLKQVVTDFLASFS 548

Query: 121 G 121
           G
Sbjct: 549 G 549


>gi|350404548|ref|XP_003487140.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Bombus
           impatiens]
          Length = 547

 Score =  208 bits (530), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 113/121 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 427 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK++P+KIT FEKEFLAHI++++R LL +I K+  I+E +DAKLK VVT+FLA+F+
Sbjct: 487 RGYLDKMEPSKITAFEKEFLAHIRTTQRDLLNTIAKDNTISEASDAKLKQVVTDFLASFS 546

Query: 121 G 121
           G
Sbjct: 547 G 547


>gi|195383092|ref|XP_002050260.1| GJ22050 [Drosophila virilis]
 gi|194145057|gb|EDW61453.1| GJ22050 [Drosophila virilis]
          Length = 550

 Score =  208 bits (529), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 430 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DP+KIT FEKEFL HIK+SE+GLL+ I K+G+I+E  DAKLK +V  F++ F 
Sbjct: 490 RGHLDKMDPSKITKFEKEFLQHIKTSEQGLLDGIAKDGQISEAADAKLKDIVQKFMSTFQ 549

Query: 121 G 121
           G
Sbjct: 550 G 550


>gi|269784695|ref|NP_001161449.1| ATP synthase subunit alpha, mitochondrial [Nasonia vitripennis]
          Length = 546

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/119 (83%), Positives = 111/119 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 426 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+DPAKIT FEKEFLAHIK++++ LL +I KE  I+E +DAKLK VVT+FL++F
Sbjct: 486 RGYLDKMDPAKITAFEKEFLAHIKATQQDLLATIAKENIISEASDAKLKKVVTDFLSSF 544


>gi|357606304|gb|EHJ65007.1| ATP synthase [Danaus plexippus]
          Length = 552

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRG+RLTELLKQGQYVPMAIEEQVA+IYCGV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKLDP KIT FEKEF  HIK+S +GLL +I K+G+IT ++DA LK +V++FLA F
Sbjct: 491 RGHLDKLDPTKITAFEKEFTQHIKTSHQGLLNTIAKDGQITPESDASLKKIVSDFLATF 549


>gi|125807728|ref|XP_001360504.1| GA17558 [Drosophila pseudoobscura pseudoobscura]
 gi|195150193|ref|XP_002016039.1| GL11379 [Drosophila persimilis]
 gi|54635676|gb|EAL25079.1| GA17558 [Drosophila pseudoobscura pseudoobscura]
 gi|194109886|gb|EDW31929.1| GL11379 [Drosophila persimilis]
          Length = 552

 Score =  206 bits (524), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 98/121 (80%), Positives = 110/121 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIYCGV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP KIT FEKEFL  +K+SE+GLL++I KEG I+E TDAKLK +V+ FLA F 
Sbjct: 492 RGYLDKMDPGKITNFEKEFLQLMKTSEQGLLDTIAKEGAISEATDAKLKDIVSKFLATFQ 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|322785985|gb|EFZ12601.1| hypothetical protein SINV_08923 [Solenopsis invicta]
          Length = 544

 Score =  206 bits (523), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/120 (81%), Positives = 112/120 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 424 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP KIT+FEKEFLAHI+S+++ LL +I KE  I+E +DAKLK VVT+FL++F+
Sbjct: 484 RGYLDKMDPTKITSFEKEFLAHIRSTQQDLLATIAKENLISEASDAKLKKVVTDFLSSFS 543


>gi|307208992|gb|EFN86192.1| ATP synthase subunit alpha, mitochondrial [Harpegnathos saltator]
          Length = 548

 Score =  203 bits (517), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 110/120 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 428 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP KIT FEKEFLAHI+S+++ LL  I KE  I+E +DAKLK +VT+FL++F+
Sbjct: 488 RGYLDKMDPTKITGFEKEFLAHIRSTQQDLLAVIAKENVISEASDAKLKKIVTDFLSSFS 547


>gi|288816877|gb|ADC55251.1| mitochondrial ATP synthase subunit alpha precursor [Litopenaeus
           vannamei]
          Length = 550

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYRE AAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV
Sbjct: 430 MKLELAQYREAAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLDK+DP+KIT FE+EF+A +K+S +GLL++I KEG IT ++DAKLK +VT+FLA F
Sbjct: 490 CGHLDKMDPSKITKFEQEFMAMLKTSHQGLLDNIAKEGHITPESDAKLKQIVTDFLATF 548


>gi|332023250|gb|EGI63505.1| ATP synthase subunit alpha, mitochondrial [Acromyrmex echinatior]
          Length = 546

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/120 (80%), Positives = 110/120 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLD ATQQLLNRGVRLTELLKQGQYVPMAIEEQVA+IYCGV
Sbjct: 426 MKLELAQYREVAAFAQFGSDLDPATQQLLNRGVRLTELLKQGQYVPMAIEEQVAIIYCGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP KIT+FEKEFLAHI+S+++ LL +I KE  I+E +DAKLK VVT+FL +F+
Sbjct: 486 RGYLDKMDPTKITSFEKEFLAHIRSTQQDLLATIAKENVISEASDAKLKKVVTDFLLSFS 545


>gi|321459762|gb|EFX70812.1| hypothetical protein DAPPUDRAFT_309281 [Daphnia pulex]
          Length = 549

 Score =  202 bits (513), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLL+RGVRLTELLKQGQYVPMAIEEQV VIYCGV
Sbjct: 429 MKLELAQYREVAAFAQFGSDLDASTQQLLSRGVRLTELLKQGQYVPMAIEEQVPVIYCGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKLDP+KIT FEKEFL HIK++   +L +I K+GKIT++TDAKLK +VT FLA F
Sbjct: 489 RGYLDKLDPSKITAFEKEFLQHIKTTHADVLTAIAKDGKITDETDAKLKKIVTEFLATF 547


>gi|268569758|ref|XP_002640606.1| Hypothetical protein CBG08717 [Caenorhabditis briggsae]
          Length = 537

 Score =  202 bits (513), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 417 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 476

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDK+DP+ IT FEKEFLAH++SS++ LL++I+ EG+I+  TDA+LK VVTNFLA F
Sbjct: 477 KGHLDKVDPSAITKFEKEFLAHLRSSQQALLKTIRDEGQISPQTDAQLKDVVTNFLATF 535


>gi|427789213|gb|JAA60058.1| Putative f0f1-type atp synthase alpha subunit [Rhipicephalus
           pulchellus]
          Length = 553

 Score =  201 bits (510), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 96/120 (80%), Positives = 107/120 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIE+QVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEDQVAVIYTGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDKLDPAKI  FEKEFL HI+S  + +L +I +EG I+E TDAKLK +VT+F+ANFT
Sbjct: 493 RGYLDKLDPAKINDFEKEFLQHIRSHHKDVLATIAQEGHISEATDAKLKNIVTSFMANFT 552


>gi|170592445|ref|XP_001900975.1| ATP synthase alpha chain, mitochondrial precursor [Brugia malayi]
 gi|158591042|gb|EDP29655.1| ATP synthase alpha chain, mitochondrial precursor, putative [Brugia
           malayi]
          Length = 536

 Score =  201 bits (510), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 111/119 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 416 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 475

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDKLDP++IT FE+EFL HI+ +++ LL++I++EG+IT  TDAKLK +VT+F+A+F
Sbjct: 476 KGHLDKLDPSRITVFEREFLTHIRQTQKELLKTIREEGQITPQTDAKLKDLVTSFIASF 534


>gi|346473631|gb|AEO36660.1| hypothetical protein [Amblyomma maculatum]
          Length = 555

 Score =  200 bits (509), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 435 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYTGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+DP++I  FE EFL HI+S+++ LL +I KEGKI++DTDAKLK VVT+F+A+F
Sbjct: 495 RGYLDKMDPSQINRFELEFLQHIRSTQKDLLATIAKEGKISDDTDAKLKKVVTDFMASF 553


>gi|346465481|gb|AEO32585.1| hypothetical protein [Amblyomma maculatum]
          Length = 575

 Score =  200 bits (509), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 455 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYTGV 514

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+DP++I  FE EFL HI+S+++ LL +I KEGKI++DTDAKLK VVT+F+A+F
Sbjct: 515 RGYLDKMDPSQINRFELEFLQHIRSTQKDLLATIAKEGKISDDTDAKLKKVVTDFMASF 573


>gi|402595097|gb|EJW89023.1| ATP synthase F1 [Wuchereria bancrofti]
          Length = 536

 Score =  200 bits (509), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 111/119 (93%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 416 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 475

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDKLDP++IT FE+EFL HI+ +++ LL++I++EG+IT  TDAKLK +VT+F+A+F
Sbjct: 476 KGHLDKLDPSRITIFEREFLTHIRQTQKELLKTIREEGQITPQTDAKLKDLVTSFIASF 534


>gi|326934662|ref|XP_003213405.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 125

 Score =  200 bits (508), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 5   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 64

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +I+ EGKI++ T+AKLK +VTNFL+ F
Sbjct: 65  RGHLDKLEPSKITKFESAFLAHVLSQHQALLSTIRTEGKISDQTEAKLKEIVTNFLSTF 123


>gi|308470912|ref|XP_003097688.1| hypothetical protein CRE_14174 [Caenorhabditis remanei]
 gi|308239806|gb|EFO83758.1| hypothetical protein CRE_14174 [Caenorhabditis remanei]
          Length = 537

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 417 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 476

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+DP+ IT FEKEFLAH++SS++ LL+ I++EG+I+  TDA+LK VVTNFLA F
Sbjct: 477 KGYLDKIDPSAITKFEKEFLAHLRSSQQALLKVIREEGQISPQTDAQLKDVVTNFLATF 535


>gi|341896907|gb|EGT52842.1| hypothetical protein CAEBREN_32252 [Caenorhabditis brenneri]
          Length = 432

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 312 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 371

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+DP+ IT FEKEFLAH++SS++ LL+ I++EG+I+  TDA+LK VVTNFLA F
Sbjct: 372 KGYLDKVDPSAITKFEKEFLAHLRSSQQALLKVIREEGQISPQTDAQLKDVVTNFLATF 430


>gi|363745506|ref|XP_429118.3| PREDICTED: ATP synthase subunit alpha, mitochondrial [Gallus
           gallus]
          Length = 553

 Score =  198 bits (504), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  FLAH+ S    LL +I+ EGKI++ T+AKLK +VTNFL+ F
Sbjct: 493 RGHLDKLEPSKITKFESAFLAHVLSQHEALLSTIRTEGKISDQTEAKLKEIVTNFLSTF 551


>gi|327259463|ref|XP_003214556.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Anolis
           carolinensis]
          Length = 553

 Score =  198 bits (503), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +I+ EGKI+E T+AKLK +VT+FL+ F
Sbjct: 493 RGHLDKLEPSKITRFESAFLAHVLSQHQALLATIRTEGKISEQTEAKLKEIVTSFLSTF 551


>gi|393911207|gb|EJD76211.1| ATP synthase subunit alpha, variant [Loa loa]
          Length = 536

 Score =  198 bits (503), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 416 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 475

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDKLDP++IT FE+EFL HI+ +++ LL++I++E +IT  TDAKLK + T+F+ANF
Sbjct: 476 KGHLDKLDPSRITVFEREFLIHIRQTQKELLKTIREEAQITPQTDAKLKDLATSFIANF 534


>gi|393911206|gb|EJD76210.1| ATP synthase subunit alpha [Loa loa]
          Length = 586

 Score =  197 bits (502), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 466 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 525

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDKLDP++IT FE+EFL HI+ +++ LL++I++E +IT  TDAKLK + T+F+ANF
Sbjct: 526 KGHLDKLDPSRITVFEREFLIHIRQTQKELLKTIREEAQITPQTDAKLKDLATSFIANF 584


>gi|349804321|gb|AEQ17633.1| putative atp h+ mitochondrial f1 alpha isoform [Hymenochirus
           curtipes]
          Length = 414

 Score =  197 bits (502), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 294 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 353

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAHI+S  + LL +I+ +GKI+E TDAKLK +V NFL+ F
Sbjct: 354 RGHLDKMEPSKITKFESTFLAHIRSQHQELLATIRADGKISEQTDAKLKQIVINFLSTF 412


>gi|71988074|ref|NP_001021528.1| Protein H28O16.1, isoform c [Caenorhabditis elegans]
 gi|31441843|emb|CAD92384.1| Protein H28O16.1, isoform c [Caenorhabditis elegans]
          Length = 503

 Score =  197 bits (501), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+DP+ IT FEKEFLAH++SS++ LL++I++EG+I+  TDA+LK VV NFLA F
Sbjct: 443 KGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501


>gi|71988063|ref|NP_001021526.1| Protein H28O16.1, isoform a [Caenorhabditis elegans]
 gi|75029335|sp|Q9XXK1.1|ATPA_CAEEL RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|3878073|emb|CAA19429.1| Protein H28O16.1, isoform a [Caenorhabditis elegans]
          Length = 538

 Score =  197 bits (500), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 418 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 477

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+DP+ IT FEKEFLAH++SS++ LL++I++EG+I+  TDA+LK VV NFLA F
Sbjct: 478 KGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536


>gi|71988080|ref|NP_001021529.1| Protein H28O16.1, isoform d [Caenorhabditis elegans]
 gi|42733088|emb|CAF31480.1| Protein H28O16.1, isoform d [Caenorhabditis elegans]
          Length = 511

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPM IEEQV VIY GV
Sbjct: 391 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+DP+ IT FEKEFLAH++SS++ LL++I++EG+I+  TDA+LK VV NFLA F
Sbjct: 451 KGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509


>gi|442747027|gb|JAA65673.1| Putative f0f1-type atp synthase alpha subunit [Ixodes ricinus]
          Length = 555

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 435 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYTGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKLDP++I  FE EFL HI+S+++ LL +I KEG I+ DTDAKLK +V +F+A+F
Sbjct: 495 RGYLDKLDPSQINRFEAEFLPHIRSTQKELLATIAKEGHISPDTDAKLKKIVVDFMASF 553


>gi|241705635|ref|XP_002413266.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|215507080|gb|EEC16574.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
          Length = 555

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 435 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYTGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKLDP++I  FE EFL HI+S+++ LL +I KEG I+ DTDAKLK +V +F+A+F
Sbjct: 495 RGYLDKLDPSQINRFEAEFLPHIRSTQKELLATIAKEGHISPDTDAKLKKIVVDFMASF 553


>gi|324515277|gb|ADY46150.1| ATP synthase subunit alpha, partial [Ascaris suum]
          Length = 459

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 107/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIE+QVAVIY GV
Sbjct: 339 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYAGV 398

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKLDPA IT FEKEFLAHI+ +++ LL++I++EG I+  T+ +LK VVT FLA F
Sbjct: 399 RGHLDKLDPALITKFEKEFLAHIRQTQQDLLKTIREEGSISPATENRLKEVVTTFLAGF 457


>gi|224089781|ref|XP_002195743.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Taeniopygia
           guttata]
          Length = 553

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +I+ EGKI++ T+AKLK +VT FL+ F
Sbjct: 493 RGHLDKLEPSKITKFESAFLAHVLSQHQDLLSTIRTEGKISDQTEAKLKEIVTKFLSTF 551


>gi|89266451|gb|ABD65517.1| mitochondrial ATPase alpha subunit [Ictalurus punctatus]
          Length = 121

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 107/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 2   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 61

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FEK FL HI+S ++ LL +I+ EGKI+E +DAKLK +V NFL++F
Sbjct: 62  RGYLDKLEPSKITKFEKAFLQHIRSQQQELLATIRTEGKISEASDAKLKQLVLNFLSSF 120


>gi|148224211|ref|NP_001080447.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1 [Xenopus laevis]
 gi|32766606|gb|AAH54959.1| Atp5a1 protein [Xenopus laevis]
          Length = 553

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAH+KS  + LL +I+ +GKI+E  DAKLK +V NFL+ F
Sbjct: 493 RGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRTDGKISEQADAKLKEIVLNFLSTF 551


>gi|432884841|ref|XP_004074613.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 2
           [Oryzias latipes]
          Length = 529

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 410 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVAVIYAGV 469

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK VV NFL++F
Sbjct: 470 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIKADGKISEASDAKLKQVVLNFLSSF 528


>gi|432884839|ref|XP_004074612.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 1
           [Oryzias latipes]
          Length = 551

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVAVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK VV NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIKADGKISEASDAKLKQVVLNFLSSF 550


>gi|432873514|ref|XP_004072254.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 1
           [Oryzias latipes]
          Length = 551

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVAVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLSAIKTDGKISEQSDAKLKQIVLNFLSSF 550


>gi|432873516|ref|XP_004072255.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 2
           [Oryzias latipes]
          Length = 529

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 410 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVAVIYAGV 469

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 470 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLSAIKTDGKISEQSDAKLKQIVLNFLSSF 528


>gi|148223147|ref|NP_001081246.1| ATP synthase subunit alpha, mitochondrial [Xenopus laevis]
 gi|51258410|gb|AAH80064.1| LOC397732 protein [Xenopus laevis]
          Length = 553

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAH+KS  + LL +I+ +GKI+E  DAKLK +V NFL+ F
Sbjct: 493 RGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLNFLSTF 551


>gi|114535|sp|P08428.1|ATPA_XENLA RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|213948|gb|AAA49646.1| mitochondrial ATPase, alpha subunit [Xenopus laevis]
          Length = 545

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 425 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAH+KS  + LL +I+ +GKI+E  DAKLK +V NFL+ F
Sbjct: 485 RGHLDKMEPSKITKFESAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLNFLSTF 543


>gi|443717476|gb|ELU08533.1| hypothetical protein CAPTEDRAFT_158616 [Capitella teleta]
          Length = 553

 Score =  195 bits (496), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/119 (75%), Positives = 109/119 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMA+EEQVAVI+ GV
Sbjct: 434 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAVEEQVAVIFAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+DPAKIT FE++FL+H++ +++ LL +I+KEG I+E ++A +K +VT FLAN+
Sbjct: 494 RGHLDKMDPAKITDFEEKFLSHVRLTQQDLLSTIRKEGMISESSEATMKALVTEFLANY 552


>gi|47202076|emb|CAF89284.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 125

 Score =  195 bits (496), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 6   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 65

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 66  RGHLDKMEPSKITRFEKAFLQHILSQHQDLLAAIKADGKISEASDAKLKQIVLNFLSSF 124


>gi|348528017|ref|XP_003451515.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Oreochromis niloticus]
          Length = 552

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 493 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLANIKADGKISEASDAKLKQIVLNFLSSF 551


>gi|442747011|gb|JAA65665.1| Putative f0f1-type atp synthase alpha subunit [Ixodes ricinus]
          Length = 555

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIE+QVAVIY GV
Sbjct: 435 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEDQVAVIYTGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKLDP++I  +E+EFL HI++S + +L +I KEG I+E TDAKLK++VT+F+A+F
Sbjct: 495 RGYLDKLDPSQINRYEQEFLQHIRTSHKDILATIAKEGHISEATDAKLKSIVTSFMASF 553


>gi|268619126|gb|ACZ13339.1| ATP synthase alpha chain [Bursaphelenchus xylophilus]
          Length = 542

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 108/119 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 415 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 474

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDKLDP++IT FEKEFL H++++ + LL++I++E +IT  TD KLKT+VT+FLA F
Sbjct: 475 KGHLDKLDPSQITRFEKEFLTHVRANCQDLLKTIREECQITPQTDEKLKTLVTSFLAGF 533


>gi|348517239|ref|XP_003446142.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Oreochromis niloticus]
          Length = 551

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLSNIKADGKISEASDAKLKQIVLNFLSSF 550


>gi|15030240|gb|AAH11384.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
          Length = 553

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE +FL+H+ S  + LL +I+ EGKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENDFLSHVVSQHQALLGTIRAEGKISEQSDAKLKEIVTNFLAGF 551


>gi|47207317|emb|CAF96443.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 551

 Score =  194 bits (493), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITRFEKAFLQHILSQHQDLLAAIKADGKISEASDAKLKQIVLNFLSSF 550


>gi|346473629|gb|AEO36659.1| hypothetical protein [Amblyomma maculatum]
          Length = 555

 Score =  194 bits (493), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 92/120 (76%), Positives = 106/120 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIE+QVAVIY GV
Sbjct: 435 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEDQVAVIYTGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDKLDP+ I  FEKEFL HI+S  + +L +I +EG I+E TDAKLK++VT+F+A F+
Sbjct: 495 RGYLDKLDPSHINEFEKEFLQHIRSHHKDILATIAQEGHISEATDAKLKSIVTSFIATFS 554


>gi|395510599|ref|XP_003759561.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Sarcophilus harrisii]
          Length = 531

 Score =  194 bits (493), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFESAFLAHVISQHQSLLNNIRTDGKISEQSDAKLKEIVTNFLAGF 529


>gi|297591975|ref|NP_001172071.1| ATP synthase subunit alpha, mitochondrial [Sus scrofa]
 gi|187370717|gb|ACD02421.1| cardiac muscle ATP synthase H+ transporting mitochondrial F1
           complex alpha subunit 1 [Sus scrofa]
          Length = 553

 Score =  194 bits (493), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E+TDAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRADGKISEETDAKLKEIVTNFLAGF 551


>gi|403265002|ref|XP_003924746.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 531

 Score =  194 bits (492), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVVSQHKALLGTIRADGKISEESDAKLKEIVTNFLAGF 529


>gi|395510597|ref|XP_003759560.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Sarcophilus harrisii]
          Length = 553

 Score =  194 bits (492), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFESAFLAHVISQHQSLLNNIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|403265000|ref|XP_003924745.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 553

 Score =  194 bits (492), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHKALLGTIRADGKISEESDAKLKEIVTNFLAGF 551


>gi|338727975|ref|XP_001916279.2| PREDICTED: ATP synthase subunit alpha, mitochondrial [Equus
           caballus]
          Length = 503

 Score =  194 bits (492), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFESAFLAHVISQHQALLGTIRTDGKISEQSDAKLKEIVTNFLAGF 501


>gi|71896075|ref|NP_001025610.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Xenopus (Silurana)
           tropicalis]
 gi|60552664|gb|AAH91067.1| atp5a1 protein [Xenopus (Silurana) tropicalis]
          Length = 553

 Score =  194 bits (492), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAH+KS  + LL +I+ +GKI+E  DAKLK +V +FL+ F
Sbjct: 493 RGHLDKMEPSKITKFENAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLSFLSTF 551


>gi|390473957|ref|XP_002757265.2| PREDICTED: ATP synthase subunit alpha, mitochondrial [Callithrix
           jacchus]
          Length = 346

 Score =  194 bits (492), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 226 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 285

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 286 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEESDAKLKQIVTNFLAGF 344


>gi|126320697|ref|XP_001364704.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Monodelphis domestica]
          Length = 553

 Score =  193 bits (491), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFESAFLAHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|403265004|ref|XP_003924747.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 3
           [Saimiri boliviensis boliviensis]
 gi|403265006|ref|XP_003924748.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 4
           [Saimiri boliviensis boliviensis]
          Length = 503

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVVSQHKALLGTIRADGKISEESDAKLKEIVTNFLAGF 501


>gi|348576681|ref|XP_003474115.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit alpha,
           mitochondrial-like [Cavia porcellus]
          Length = 553

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE+ FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFEQAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|291394323|ref|XP_002713558.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit-like [Oryctolagus cuniculus]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGNIRTDGKISEESDAKLKEIVTNFLAGF 551


>gi|345308300|ref|XP_001506958.2| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Ornithorhynchus anatinus]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFESAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|116325975|ref|NP_001070823.1| ATP synthase subunit alpha, mitochondrial [Danio rerio]
 gi|115528192|gb|AAI24812.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Danio rerio]
          Length = 551

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL H+ S  + LL +I+ +GKI+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHVISQHQDLLAAIRSDGKISEASDAKLKEIVLNFLSSF 550


>gi|27807237|ref|NP_777109.1| ATP synthase subunit alpha, mitochondrial precursor [Bos taurus]
 gi|114402|sp|P19483.1|ATPA_BOVIN RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|262118380|pdb|2W6E|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118381|pdb|2W6E|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118382|pdb|2W6E|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118387|pdb|2W6F|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118388|pdb|2W6F|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118389|pdb|2W6F|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118394|pdb|2W6I|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118395|pdb|2W6I|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118396|pdb|2W6I|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118403|pdb|2W6J|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118404|pdb|2W6J|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118405|pdb|2W6J|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306974|pdb|2W6G|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306975|pdb|2W6G|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306976|pdb|2W6G|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306981|pdb|2W6H|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306982|pdb|2W6H|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306983|pdb|2W6H|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|102|emb|CAA45865.1| H(+)-transporting ATP synthase [Bos taurus]
 gi|162721|gb|AAB59266.1| alpha subunit ATP synthase isoform precursor (EC 3.6.1.34) [Bos
           taurus]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLSKIRTDGKISEESDAKLKEIVTNFLAGF 551


>gi|301611592|ref|XP_002935321.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Xenopus
           (Silurana) tropicalis]
          Length = 619

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 499 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 558

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FE  FLAH+KS  + LL +I+ +GKI+E  DAKLK +V +FL+ F
Sbjct: 559 RGHLDKMEPSKITKFENAFLAHVKSQHQELLATIRADGKISEQADAKLKEIVLSFLSTF 617


>gi|410977628|ref|XP_003995205.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Felis catus]
          Length = 531

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 529


>gi|410977626|ref|XP_003995204.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Felis catus]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|351707125|gb|EHB10044.1| ATP synthase subunit alpha, mitochondrial [Heterocephalus glaber]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE+ FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFEQAFLSHVVSQHQALLGNIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|149029486|gb|EDL84700.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_g [Rattus norvegicus]
          Length = 230

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 110 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 169

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 170 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 228


>gi|45383566|ref|NP_989617.1| ATP synthase subunit alpha, mitochondrial [Gallus gallus]
 gi|17225596|gb|AAL37491.1| ATP synthase alpha subunit [Gallus gallus]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           + HLDKL+P+KIT FE  FLAH+ S  + LL +I+ EGKI++ T+AKLK + TNFL+ F
Sbjct: 493 KSHLDKLEPSKITKFESAFLAHVLSQHQALLSTIRTEGKISDQTEAKLKEIFTNFLSTF 551


>gi|345802726|ref|XP_852877.2| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Canis lupus familiaris]
          Length = 553

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|301765492|ref|XP_002918165.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 553

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|149029480|gb|EDL84694.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_b [Rattus norvegicus]
 gi|149029481|gb|EDL84695.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_b [Rattus norvegicus]
          Length = 285

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 165 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 224

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 225 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 283


>gi|57029|emb|CAA39599.1| H(+)-transporting ATP synthase [Rattus norvegicus]
          Length = 235

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 115 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 174

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 175 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 233


>gi|392356210|ref|XP_003752273.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Rattus
           norvegicus]
          Length = 508

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 388 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 448 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 506


>gi|149029482|gb|EDL84696.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_c [Rattus norvegicus]
          Length = 478

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 358 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 417

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 418 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 476


>gi|441602953|ref|XP_004093346.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit alpha,
           mitochondrial [Nomascus leucogenys]
          Length = 566

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 446 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 505

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 506 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 564


>gi|158428982|pdb|2JIZ|A Chain A, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428983|pdb|2JIZ|B Chain B, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428984|pdb|2JIZ|C Chain C, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428989|pdb|2JIZ|H Chain H, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428990|pdb|2JIZ|I Chain I, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428991|pdb|2JIZ|J Chain J, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428999|pdb|2JJ1|A Chain A, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429000|pdb|2JJ1|B Chain B, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429001|pdb|2JJ1|C Chain C, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429006|pdb|2JJ1|H Chain H, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429007|pdb|2JJ1|I Chain I, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429008|pdb|2JJ1|J Chain J, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429013|pdb|2JJ2|A Chain A, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158429014|pdb|2JJ2|B Chain B, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158429015|pdb|2JJ2|C Chain C, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158429020|pdb|2JJ2|H Chain H, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158429021|pdb|2JJ2|I Chain I, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158429022|pdb|2JJ2|J Chain J, The Structure Of F1-atpase Inhibited By Quercetin.
 gi|158431066|pdb|2V7Q|A Chain A, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431067|pdb|2V7Q|B Chain B, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431068|pdb|2V7Q|C Chain C, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1
          Length = 510

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 450 RGYLDKLEPSKITKFENAFLSHVISQHQALLSKIRTDGKISEESDAKLKEIVTNFLAGF 508


>gi|148677499|gb|EDL09446.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_c [Mus musculus]
          Length = 424

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 304 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 363

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 364 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 422


>gi|426385854|ref|XP_004059413.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Gorilla gorilla gorilla]
          Length = 531

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 529


>gi|281346412|gb|EFB21996.1| hypothetical protein PANDA_006569 [Ailuropoda melanoleuca]
          Length = 507

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 387 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 446

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 447 RGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDAKLKEIVTNFLAGF 505


>gi|148677500|gb|EDL09447.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_d [Mus musculus]
          Length = 478

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 358 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 417

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 418 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 476


>gi|344269041|ref|XP_003406364.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Loxodonta
           africana]
          Length = 553

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRTDGKISEQSDAKLKEIVTNFLAGF 551


>gi|426385852|ref|XP_004059412.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Gorilla gorilla gorilla]
          Length = 553

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|40538742|ref|NP_075581.1| ATP synthase subunit alpha, mitochondrial precursor [Rattus
           norvegicus]
 gi|83300587|sp|P15999.2|ATPA_RAT RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|38512279|gb|AAH61830.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Rattus norvegicus]
 gi|149029484|gb|EDL84698.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_e [Rattus norvegicus]
          Length = 553

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|203055|gb|AAA40784.1| ATP synthase alpha subunit precursor (EC 3.6.1.3), partial [Rattus
           norvegicus]
          Length = 543

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 423 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 482

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 483 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 541


>gi|328909351|gb|AEB61343.1| ATP synthase subunit alpha mitochondrial-like protein, partial
           [Equus caballus]
          Length = 278

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 158 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 217

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FLAH+ S  + LL +I+ +GKI+E +DAK K +VTNFLA F
Sbjct: 218 RGYLDKLEPSKITKFESAFLAHVISQHQALLRTIRTDGKISEQSDAKPKEIVTNFLAGF 276


>gi|194379304|dbj|BAG63618.1| unnamed protein product [Homo sapiens]
          Length = 531

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 529


>gi|30585339|gb|AAP36942.1| Homo sapiens ATP synthase, H+ transporting, mitochondrial F1
           complex, alpha subunit, isoform 1, cardiac muscle
           [synthetic construct]
 gi|60653977|gb|AAX29681.1| ATP synthase H+ transporting mitochondrial F1 complex alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
          Length = 554

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|444728957|gb|ELW69390.1| ATP synthase subunit alpha, mitochondrial [Tupaia chinensis]
          Length = 642

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 106/119 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 522 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 581

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 582 RGYLDKLEPSKITKFENAFLSHVISQHQALLGNIRADGKISEESDAKLKEIVTNFLAGF 640


>gi|382546007|ref|NP_001244263.1| ATP synthase subunit alpha, mitochondrial isoform b precursor [Homo
           sapiens]
          Length = 531

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 529


>gi|197100035|ref|NP_001126846.1| ATP synthase subunit alpha, mitochondrial precursor [Pongo abelii]
 gi|75041057|sp|Q5R546.1|ATPA_PONAB RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|55732854|emb|CAH93120.1| hypothetical protein [Pongo abelii]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|47227593|emb|CAG09590.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 534

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 415 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 474

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +IK +GKI+E +DAKLK +V +FL++F
Sbjct: 475 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIKADGKISEASDAKLKQIVLSFLSSF 533


>gi|148677502|gb|EDL09449.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_f [Mus musculus]
          Length = 285

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 165 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 224

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 225 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 283


>gi|127798841|gb|AAH39135.2| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|426385856|ref|XP_004059414.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 3
           [Gorilla gorilla gorilla]
 gi|426385858|ref|XP_004059415.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 4
           [Gorilla gorilla gorilla]
          Length = 503

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 501


>gi|417402684|gb|JAA48181.1| Putative f0f1-type atp synthase alpha subunit [Desmodus rotundus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|405974703|gb|EKC39329.1| ATP synthase subunit alpha, mitochondrial [Crassostrea gigas]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLD ATQ LLNRGVRLTELLKQGQYVPMAIEEQV VIY GV
Sbjct: 434 MKLELAQYREVAAFAQFGSDLDQATQNLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLDK+DP++IT FE EFL H+K  ++ +L  I+K+G+ITE TDAKLK VVT FLA F
Sbjct: 494 KGHLDKIDPSRITQFEAEFLDHVKGHQQEMLTQIRKDGQITEATDAKLKEVVTTFLAGF 552


>gi|13938339|gb|AAH07299.1| ATP5A1 protein, partial [Homo sapiens]
          Length = 408

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 288 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 347

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 348 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 406


>gi|4757810|ref|NP_004037.1| ATP synthase subunit alpha, mitochondrial isoform a precursor [Homo
           sapiens]
 gi|50345984|ref|NP_001001937.1| ATP synthase subunit alpha, mitochondrial isoform a precursor [Homo
           sapiens]
 gi|209364613|ref|NP_001129208.1| ATP synthase subunit alpha, mitochondrial precursor [Pan
           troglodytes]
 gi|114517|sp|P25705.1|ATPA_HUMAN RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|158514235|sp|A5A6H5.1|ATPA_PANTR RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|28938|emb|CAA41789.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|34468|emb|CAA46452.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559317|dbj|BAA05672.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559325|dbj|BAA03531.1| ATP synthase alpha subunit [Homo sapiens]
 gi|16359160|gb|AAH16046.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|17939539|gb|AAH19310.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|30583257|gb|AAP35873.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [Homo sapiens]
 gi|40352910|gb|AAH64562.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|45709753|gb|AAH67385.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|61362466|gb|AAX42227.1| ATP synthase H+ transporting mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
 gi|61362474|gb|AAX42228.1| ATP synthase H+ transporting mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
 gi|119621876|gb|EAX01471.1| hCG23783, isoform CRA_b [Homo sapiens]
 gi|123995069|gb|ABM85136.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|124126803|gb|ABM92174.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|146741384|dbj|BAF62348.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle, nuclear gene encoding
           mitochondrial protein, transcript variant 2 [Pan
           troglodytes verus]
 gi|208965840|dbj|BAG72934.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|1090507|prf||2019238A ATP synthase:SUBUNIT=alpha
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|410903600|ref|XP_003965281.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 2
           [Takifugu rubripes]
          Length = 529

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 410 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVTVIYAGV 469

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +I+ +GKI+E +DAKLK +V NFL++F
Sbjct: 470 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLSAIRADGKISEASDAKLKQIVLNFLSSF 528


>gi|410356452|gb|JAA44539.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Pan troglodytes]
          Length = 578

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 458 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 517

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 518 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 576


>gi|50345982|ref|NP_001001935.1| ATP synthase subunit alpha, mitochondrial isoform c [Homo sapiens]
 gi|382546190|ref|NP_001244264.1| ATP synthase subunit alpha, mitochondrial isoform c [Homo sapiens]
 gi|158259937|dbj|BAF82146.1| unnamed protein product [Homo sapiens]
 gi|193787398|dbj|BAG52604.1| unnamed protein product [Homo sapiens]
 gi|343962369|dbj|BAK62772.1| ATP synthase subunit alpha, mitochondrial precursor [Pan
           troglodytes]
          Length = 503

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 501


>gi|397520261|ref|XP_003830242.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2 [Pan
           paniscus]
          Length = 531

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 529


>gi|6680748|ref|NP_031531.1| ATP synthase subunit alpha, mitochondrial precursor [Mus musculus]
 gi|416677|sp|Q03265.1|ATPA_MOUSE RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|192090|gb|AAA37271.1| ATP synthase alpha subunit [Mus musculus]
 gi|15928789|gb|AAH14854.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1 [Mus musculus]
 gi|26336074|dbj|BAC31722.1| unnamed protein product [Mus musculus]
 gi|26345496|dbj|BAC36399.1| unnamed protein product [Mus musculus]
 gi|74139449|dbj|BAE40864.1| unnamed protein product [Mus musculus]
 gi|74139497|dbj|BAE40887.1| unnamed protein product [Mus musculus]
 gi|74139568|dbj|BAE40921.1| unnamed protein product [Mus musculus]
 gi|74141985|dbj|BAE41056.1| unnamed protein product [Mus musculus]
 gi|74142000|dbj|BAE41063.1| unnamed protein product [Mus musculus]
 gi|74151623|dbj|BAE41160.1| unnamed protein product [Mus musculus]
 gi|74177731|dbj|BAE38962.1| unnamed protein product [Mus musculus]
 gi|74178233|dbj|BAE29901.1| unnamed protein product [Mus musculus]
 gi|74181518|dbj|BAE30027.1| unnamed protein product [Mus musculus]
 gi|74184829|dbj|BAE39039.1| unnamed protein product [Mus musculus]
 gi|74185320|dbj|BAE30136.1| unnamed protein product [Mus musculus]
 gi|74185496|dbj|BAE30216.1| unnamed protein product [Mus musculus]
 gi|74189075|dbj|BAE39300.1| unnamed protein product [Mus musculus]
 gi|74197158|dbj|BAE35125.1| unnamed protein product [Mus musculus]
 gi|74197967|dbj|BAE35167.1| unnamed protein product [Mus musculus]
 gi|74204241|dbj|BAE39881.1| unnamed protein product [Mus musculus]
 gi|74204548|dbj|BAE35349.1| unnamed protein product [Mus musculus]
 gi|74207217|dbj|BAE30798.1| unnamed protein product [Mus musculus]
 gi|74207463|dbj|BAE30910.1| unnamed protein product [Mus musculus]
 gi|74213551|dbj|BAE35585.1| unnamed protein product [Mus musculus]
 gi|74219557|dbj|BAE29549.1| unnamed protein product [Mus musculus]
 gi|74219781|dbj|BAE40482.1| unnamed protein product [Mus musculus]
 gi|74223116|dbj|BAE40697.1| unnamed protein product [Mus musculus]
 gi|74223137|dbj|BAE40707.1| unnamed protein product [Mus musculus]
 gi|74223216|dbj|BAE40744.1| unnamed protein product [Mus musculus]
 gi|74225278|dbj|BAE31573.1| unnamed protein product [Mus musculus]
 gi|148677497|gb|EDL09444.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_a [Mus musculus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|34782901|gb|AAH08028.2| ATP5A1 protein, partial [Homo sapiens]
          Length = 450

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 330 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 389

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 390 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 448


>gi|74211072|dbj|BAE37632.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|343962183|dbj|BAK62679.1| ATP synthase subunit alpha, mitochondrial precursor [Pan
           troglodytes]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|93279422|pdb|2F43|A Chain A, Rat Liver F1-atpase
          Length = 510

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 450 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 508


>gi|13111901|gb|AAH03119.1| ATP5A1 protein, partial [Homo sapiens]
          Length = 368

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 248 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 307

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 308 RGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 366


>gi|74139457|dbj|BAE40868.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|296473661|tpg|DAA15776.1| TPA: ATP synthase subunit alpha, mitochondrial precursor [Bos
           taurus]
 gi|440908838|gb|ELR58820.1| ATP synthase subunit alpha, mitochondrial [Bos grunniens mutus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 551


>gi|94574274|gb|AAI16060.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Bos taurus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 551


>gi|432108100|gb|ELK33078.1| ATP synthase subunit alpha, mitochondrial [Myotis davidii]
          Length = 528

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 408 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 467

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 468 RGYLDKLEPSKITKFESAFLSHVISQHQALLGNIRSDGKISEQSDAKLKEIVTNFLAGF 526


>gi|410903598|ref|XP_003965280.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 1
           [Takifugu rubripes]
          Length = 551

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVTVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +I+ +GKI+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLSAIRADGKISEASDAKLKQIVLNFLSSF 550


>gi|149029483|gb|EDL84697.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_d [Rattus norvegicus]
          Length = 503

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 501


>gi|397520259|ref|XP_003830241.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1 [Pan
           paniscus]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|340386586|ref|XP_003391789.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like, partial
           [Amphimedon queenslandica]
          Length = 317

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 106/120 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ LLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 196 MKLELAQYREVAAFAQFGSDLDAATQSLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 255

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDKLDPA +T+FE  FL H++SS++ LL++I+ EG+++ +TD KLK VV +F+  FT
Sbjct: 256 RGYLDKLDPALVTSFESSFLEHLRSSQKSLLDTIRNEGQLSPETDEKLKQVVLSFMETFT 315


>gi|148677501|gb|EDL09448.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_e [Mus musculus]
          Length = 503

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 501


>gi|397520263|ref|XP_003830243.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 3 [Pan
           paniscus]
 gi|397520265|ref|XP_003830244.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 4 [Pan
           paniscus]
          Length = 503

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGF 501


>gi|431896221|gb|ELK05637.1| ATP synthase subunit alpha, mitochondrial [Pteropus alecto]
          Length = 553

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGNIRADGKISEQSDAKLKEIVTNFLAGF 551


>gi|74211198|dbj|BAE37675.1| unnamed protein product [Mus musculus]
          Length = 472

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 352 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 411

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 412 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 470


>gi|344248159|gb|EGW04263.1| ATP synthase subunit alpha, mitochondrial [Cricetulus griseus]
          Length = 285

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 165 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 224

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 225 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRADGKISEQSDAKLKEIVTNFLAGF 283


>gi|149029485|gb|EDL84699.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_f [Rattus norvegicus]
          Length = 459

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 339 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 398

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 399 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 457


>gi|148677504|gb|EDL09451.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_h [Mus musculus]
          Length = 506

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 386 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 445

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 446 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 504


>gi|306991564|pdb|2XND|A Chain A, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991565|pdb|2XND|B Chain B, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991566|pdb|2XND|C Chain C, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 492

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 372 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 431

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 432 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 490


>gi|1943080|pdb|1BMF|A Chain A, Bovine Mitochondrial F1-Atpase
 gi|1943081|pdb|1BMF|B Chain B, Bovine Mitochondrial F1-Atpase
 gi|1943082|pdb|1BMF|C Chain C, Bovine Mitochondrial F1-Atpase
 gi|3660248|pdb|1NBM|A Chain A, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660249|pdb|1NBM|B Chain B, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660250|pdb|1NBM|C Chain C, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|6573680|pdb|1QO1|A Chain A, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573681|pdb|1QO1|B Chain B, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573682|pdb|1QO1|C Chain C, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|9256938|pdb|1E1Q|A Chain A, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256939|pdb|1E1Q|B Chain B, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256940|pdb|1E1Q|C Chain C, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256945|pdb|1E1R|A Chain A, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256946|pdb|1E1R|B Chain B, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256947|pdb|1E1R|C Chain C, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|11514056|pdb|1E79|A Chain A, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514057|pdb|1E79|B Chain B, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514058|pdb|1E79|C Chain C, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|14278504|pdb|1H8H|A Chain A, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278505|pdb|1H8H|B Chain B, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278506|pdb|1H8H|C Chain C, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|15825702|pdb|1H8E|A Chain A, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825703|pdb|1H8E|B Chain B, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825704|pdb|1H8E|C Chain C, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|33357741|pdb|1OHH|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357743|pdb|1OHH|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|51247969|pdb|1W0J|A Chain A, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247970|pdb|1W0J|B Chain B, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247971|pdb|1W0J|C Chain C, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247976|pdb|1W0K|A Chain A, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247977|pdb|1W0K|B Chain B, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247978|pdb|1W0K|C Chain C, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|109157330|pdb|2CK3|A Chain A, Azide Inhibited Bovine F1-Atpase
 gi|109157331|pdb|2CK3|B Chain B, Azide Inhibited Bovine F1-Atpase
 gi|109157332|pdb|2CK3|C Chain C, Azide Inhibited Bovine F1-Atpase
 gi|145579791|pdb|2JDI|A Chain A, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579792|pdb|2JDI|B Chain B, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579793|pdb|2JDI|C Chain C, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|268612198|pdb|2WSS|A Chain A, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612199|pdb|2WSS|B Chain B, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612200|pdb|2WSS|C Chain C, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612207|pdb|2WSS|J Chain J, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612208|pdb|2WSS|K Chain K, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612209|pdb|2WSS|L Chain L, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|392935589|pdb|4ASU|A Chain A, F1-Atpase In Which All Three Catalytic Sites Contain Bound
           Nucleotide, With Magnesium Ion Released In The Empty
           Site
 gi|392935590|pdb|4ASU|B Chain B, F1-Atpase In Which All Three Catalytic Sites Contain Bound
           Nucleotide, With Magnesium Ion Released In The Empty
           Site
 gi|392935591|pdb|4ASU|C Chain C, F1-Atpase In Which All Three Catalytic Sites Contain Bound
           Nucleotide, With Magnesium Ion Released In The Empty
           Site
          Length = 510

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 450 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 508


>gi|148677503|gb|EDL09450.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_g [Mus musculus]
          Length = 276

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 156 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 215

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 216 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 274


>gi|1827809|pdb|1COW|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827810|pdb|1COW|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827811|pdb|1COW|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1942368|pdb|1EFR|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942369|pdb|1EFR|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942370|pdb|1EFR|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
          Length = 510

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 450 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 508


>gi|6729934|pdb|1MAB|A Chain A, Rat Liver F1-Atpase
          Length = 510

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 450 RGYLDKLEPSKITKFESAFLSHVVSQHQSLLGNIRTDGKISEQSDAKLKEIVTNFLAGF 508


>gi|354477751|ref|XP_003501082.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit alpha,
           mitochondrial-like [Cricetulus griseus]
          Length = 568

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 448 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 507

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 508 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRADGKISEQSDAKLKEIVTNFLAGF 566


>gi|340378413|ref|XP_003387722.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Amphimedon queenslandica]
          Length = 543

 Score =  191 bits (486), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 106/120 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ LLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 419 MKLELAQYREVAAFAQFGSDLDAATQSLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDKLDPA +T+FE  FL H++SS++ LL++I+ EG+++ +TD KLK VV +F+  FT
Sbjct: 479 RGYLDKLDPALVTSFESSFLEHLRSSQKSLLDTIRNEGQLSPETDEKLKQVVLSFMETFT 538


>gi|221131162|ref|XP_002163780.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Hydra
           magnipapillata]
          Length = 545

 Score =  191 bits (486), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/119 (73%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ LLNRGVRLTELLKQGQYVPM I EQVA IY GV
Sbjct: 426 MKLELAQYREVAAFAQFGSDLDAATQALLNRGVRLTELLKQGQYVPMDIAEQVATIYAGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKLDP+K+T+FE+ F+ H++++  GLL++I+ EGKI+E T+AKLK VV +F+ +F
Sbjct: 486 RGHLDKLDPSKVTSFERSFVKHVRTAHSGLLDTIRSEGKISESTEAKLKEVVVSFMQSF 544


>gi|327248646|dbj|BAK09231.1| ATP synthase alpha subunit 1 [Mesocricetus auratus]
          Length = 553

 Score =  191 bits (485), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL SI+ +GKI+E +DAKLK +V NFLA F
Sbjct: 493 RGYLDKLEPSKITKFESAFLSHVISQHQSLLGSIRTDGKISEQSDAKLKEIVINFLAGF 551


>gi|14009437|dbj|BAB47389.1| mitochondrial ATP synthase alpha-subunit [Cyprinus carpio]
          Length = 552

 Score =  191 bits (485), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 93/119 (78%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVI  GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVAVINAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+DP+KIT FEK FL H+ S +  L  +I+ +GKI+E +DAKLK VV NFLA+F
Sbjct: 493 RGHLDKMDPSKITKFEKAFLQHVISQQTDLFAAIRTDGKISEASDAKLKEVVLNFLASF 551


>gi|260813788|ref|XP_002601598.1| hypothetical protein BRAFLDRAFT_85833 [Branchiostoma floridae]
 gi|229286897|gb|EEN57610.1| hypothetical protein BRAFLDRAFT_85833 [Branchiostoma floridae]
          Length = 526

 Score =  191 bits (485), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQ LL+RGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 407 MKLELAQYREVAAFAQFGSDLDASTQALLSRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 466

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+DP+KIT FE+ F+ HI+SS    L +I+ EGK+++ TD KLK +VTNFLA F
Sbjct: 467 RGHLDKVDPSKITKFERLFVQHIRSSHTDTLATIRTEGKLSDATDEKLKAIVTNFLATF 525


>gi|426253779|ref|XP_004020569.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Ovis aries]
          Length = 553

 Score =  191 bits (484), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E+ DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQTLLGKIRTDGKISEEADAKLKEIVTNFLAGF 551


>gi|426253781|ref|XP_004020570.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 2
           [Ovis aries]
          Length = 531

 Score =  191 bits (484), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 411 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 470

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E+ DAKLK +VTNFLA F
Sbjct: 471 RGYLDKLEPSKITKFENAFLSHVISQHQTLLGKIRTDGKISEEADAKLKEIVTNFLAGF 529


>gi|74211977|dbj|BAE40158.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  190 bits (483), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 551


>gi|355755008|gb|EHH58875.1| ATP synthase subunit alpha, mitochondrial [Macaca fascicularis]
          Length = 553

 Score =  190 bits (483), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VT FLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTKFLAGF 551


>gi|90076152|dbj|BAE87756.1| unnamed protein product [Macaca fascicularis]
          Length = 553

 Score =  190 bits (483), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VT FLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTKFLAGF 551


>gi|388454205|ref|NP_001253341.1| ATP synthase subunit alpha, mitochondrial [Macaca mulatta]
 gi|355701929|gb|EHH29282.1| ATP synthase subunit alpha, mitochondrial [Macaca mulatta]
 gi|387539870|gb|AFJ70562.1| ATP synthase subunit alpha, mitochondrial precursor [Macaca
           mulatta]
          Length = 553

 Score =  190 bits (483), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VT FLA F
Sbjct: 493 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTKFLAGF 551


>gi|402903036|ref|XP_003914389.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Papio anubis]
          Length = 503

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 383 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VT FLA F
Sbjct: 443 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTKFLAGF 501


>gi|67969274|dbj|BAE00990.1| unnamed protein product [Macaca fascicularis]
          Length = 357

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 237 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 296

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VT FLA F
Sbjct: 297 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTKFLAGF 355


>gi|410922776|ref|XP_003974858.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 1
           [Takifugu rubripes]
          Length = 551

 Score =  189 bits (480), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 432 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVTVIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +I+ +G I+E +DAKLK +V NFL++F
Sbjct: 492 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIRADGMISEASDAKLKQIVLNFLSSF 550


>gi|410922778|ref|XP_003974859.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like isoform 2
           [Takifugu rubripes]
          Length = 529

 Score =  189 bits (480), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 410 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYSPMAIEEQVTVIYAGV 469

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++P+KIT FEK FL HI S  + LL +I+ +G I+E +DAKLK +V NFL++F
Sbjct: 470 RGHLDKMEPSKITKFEKAFLQHILSQHQDLLAAIRADGMISEASDAKLKQIVLNFLSSF 528


>gi|209151440|gb|ACI33076.1| ATP synthase subunit alpha, mitochondrial precursor [Salmo salar]
 gi|223648354|gb|ACN10935.1| ATP synthase subunit alpha, mitochondrial precursor [Salmo salar]
          Length = 552

 Score =  189 bits (479), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/119 (76%), Positives = 100/119 (84%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+DP KIT FEK FL H+ S  + LL  I+ +GKI+E  DA+LK +V  FLA+F
Sbjct: 493 RGHLDKMDPTKITKFEKAFLQHVLSQHQDLLAQIRADGKISETADAQLKQIVLTFLASF 551


>gi|387914304|gb|AFK10761.1| ATP synthase subunit alpha-like protein [Callorhinchus milii]
 gi|392881566|gb|AFM89615.1| ATP synthase subunit alpha, mitochondrial-like protein
           [Callorhinchus milii]
 gi|392884136|gb|AFM90900.1| ATP synthase subunit alpha, mitochondrial-like protein
           [Callorhinchus milii]
          Length = 555

 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 104/119 (87%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 435 MKLELAQFREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  +L+H+K+  + LL +I+ EG I+++ +AKLK +V NFLA F
Sbjct: 495 RGHLDKLEPSKITRFETAYLSHMKTQHQDLLNTIRDEGHISDEMEAKLKQIVINFLATF 553


>gi|392878910|gb|AFM88287.1| ATP synthase subunit alpha, mitochondrial-like protein
           [Callorhinchus milii]
          Length = 555

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/119 (73%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REVAAFAQFGSD DAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 435 MKLELAQFREVAAFAQFGSDQDAATQQLLNRGVRLTELLKQGQYTPMAIEEQVAVIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKL+P+KIT FE  +L+H+K+  + LL +I+ EG I+++ +AKLK +V NFLA F
Sbjct: 495 RGHLDKLEPSKITRFETAYLSHMKTQHQDLLNTIRDEGHISDEMEAKLKQIVINFLATF 553


>gi|196001889|ref|XP_002110812.1| ATP5A1 protein [Trichoplax adhaerens]
 gi|190586763|gb|EDV26816.1| ATP5A1 protein [Trichoplax adhaerens]
          Length = 453

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 105/119 (88%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ LLNRGVRLTELLKQGQYVPM+IEEQVAVI+CGV
Sbjct: 334 MKLELAQYREVAAFAQFGSDLDAATQSLLNRGVRLTELLKQGQYVPMSIEEQVAVIFCGV 393

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK++PAKIT FE+ FL +I+++ + +L+SI+++ +IT D++AKLK  V  FL  F
Sbjct: 394 RGHLDKVEPAKITAFEEGFLKYIRTNYQAVLDSIREQSQITPDSEAKLKEAVATFLETF 452


>gi|116008297|gb|ABJ51956.1| mitochondrial H+ ATPase a subunit [Pinctada fucata]
          Length = 553

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLD ATQ LLNRGVRLTELLKQ QYVPMAIEEQVAVIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDQATQNLLNRGVRLTELLKQAQYVPMAIEEQVAVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LDK+DP++IT FE  F++HI+ S++ LL  I+K+G+ITE +DAKLK VVT FL+ F
Sbjct: 493 KGRLDKVDPSRITEFEAAFVSHIRGSQQELLGQIRKDGQITEASDAKLKEVVTQFLSTF 551


>gi|90075206|dbj|BAE87283.1| unnamed protein product [Macaca fascicularis]
          Length = 513

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/119 (73%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQL++RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 393 MKLELAQYREVAAFAQFGSDLDAATQQLMSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+K T FE  FL+H+ S  + L  +I+ EGKI+E++DAKL+ +VT FLA F
Sbjct: 453 RGYLDKLEPSKSTKFENAFLSHVISQHQALWGTIRAEGKISEESDAKLREIVTKFLAGF 511


>gi|47551121|ref|NP_999743.1| mitochondrial ATP synthase alpha subunit precursor
           [Strongylocentrotus purpuratus]
 gi|1556441|emb|CAA69203.1| mitochondrial ATP synthase alpha subunit precursor
           [Strongylocentrotus purpuratus]
          Length = 551

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/121 (69%), Positives = 104/121 (85%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+L +YREVAAFAQFGSDLDA+TQ LLNRGVRLTELLKQGQY PMA+E+QVAV++ GV
Sbjct: 431 MKLDLGEYREVAAFAQFGSDLDASTQNLLNRGVRLTELLKQGQYTPMAVEDQVAVLFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLDK+DPAK+T FE++FLAHI+SS + LL++I+ EG+++  T+A LK VV  FL  F 
Sbjct: 491 RGHLDKIDPAKVTKFEEQFLAHIRSSHQALLDTIRTEGQLSPQTEATLKDVVLKFLDTFE 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|395513951|ref|XP_003761185.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Sarcophilus harrisii]
          Length = 550

 Score =  181 bits (459), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 86/121 (71%), Positives = 99/121 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFG+DLD ATQQLLNRG+RLTELLKQ QY PMAIEEQV VIY GV
Sbjct: 430 MKLELAQYREVAAFAQFGTDLDPATQQLLNRGIRLTELLKQAQYAPMAIEEQVTVIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP  IT FE+ FLAH+  S + LL  IK +G I+E+++ KLK VV +FLA F 
Sbjct: 490 RGYLDKMDPINITKFERTFLAHVIESHQALLNCIKSDGMISEESEKKLKKVVNSFLAEFK 549

Query: 121 G 121
           G
Sbjct: 550 G 550


>gi|74096071|ref|NP_001027729.1| ATP synthase alpha-subunit [Ciona intestinalis]
 gi|18143645|dbj|BAB79706.1| ATP synthase alpha-subunit [Ciona intestinalis]
          Length = 554

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/120 (70%), Positives = 101/120 (84%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYREVAAFAQFGSD+DAATQQLLNRGVRLTELLKQ QY PM I EQ+  ++CGV
Sbjct: 434 MKLDLAQYREVAAFAQFGSDMDAATQQLLNRGVRLTELLKQIQYSPMDIAEQIVSVFCGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+DP K+T FE  FLAH+KSS   +L+SI+ EGKITE T+A+LK VV  F+ +F+
Sbjct: 494 RGYLDKVDPTKVTDFETAFLAHMKSSHAKILDSIRNEGKITESTEAELKEVVAAFVKSFS 553


>gi|390473946|ref|XP_003734697.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Callithrix jacchus]
          Length = 552

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 85/119 (71%), Positives = 101/119 (84%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQY EVAAF+QF SDLDAATQQLL+RGVRLT LLKQGQY PMAIEEQVAVIY G+
Sbjct: 432 MKLELAQYHEVAAFSQFCSDLDAATQQLLSRGVRLTNLLKQGQYAPMAIEEQVAVIYAGI 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL+P+KIT  E  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 492 SGYLDKLEPSKITKRENAFLSHVVSQHQALLGTIRADGKISEESDAKLKQIVTNFLAGF 550


>gi|291232529|ref|XP_002736205.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit-like [Saccoglossus kowalevskii]
          Length = 550

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 97/119 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQ LLNRGVRLTELLKQGQYVPM I EQV VIY GV
Sbjct: 431 MKLELAQYREVAAFAQFGSDLDASTQALLNRGVRLTELLKQGQYVPMDIAEQVCVIYAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+DP  IT FE+EFL HI+SS   L+  I+ E  I+E TD KLK +V +FL +F
Sbjct: 491 RGHLDKVDPTLITRFEQEFLKHIRSSHSDLVGVIRAEQHISESTDKKLKEIVISFLQSF 549


>gi|391333405|ref|XP_003741104.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Metaseiulus occidentalis]
          Length = 540

 Score =  177 bits (448), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 103/119 (86%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIE+QV V+Y GV
Sbjct: 420 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYKPMAIEDQVVVVYTGV 479

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKLDPA I  FE +FL+ +++  + +L++I  EGKI++  DA+LK +VT+F+A+F
Sbjct: 480 RGYLDKLDPALIGKFEAQFLSLMRTQHKSILDTIASEGKISDTIDAQLKKIVTDFVASF 538


>gi|339253862|ref|XP_003372154.1| ATP synthase F1, alpha subunit [Trichinella spiralis]
 gi|316967484|gb|EFV51901.1| ATP synthase F1, alpha subunit [Trichinella spiralis]
          Length = 604

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 21/140 (15%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY---------------- 44
           MKLELAQYREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQY                
Sbjct: 463 MKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYGIFVCWFYSSLLSIVF 522

Query: 45  -----VPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGK 99
                VPM IEEQV VIY GVRGHLDK+DP KIT FE+E+L +++++ + LL++++ EGK
Sbjct: 523 RCFFTVPMPIEEQVVVIYAGVRGHLDKMDPTKITRFEQEYLKYVRANHQHLLDTVRTEGK 582

Query: 100 ITEDTDAKLKTVVTNFLANF 119
           IT++T+AKLK VVT F+  F
Sbjct: 583 ITDETEAKLKEVVTEFMNQF 602


>gi|339521995|gb|AEJ84162.1| mitochondrial ATP synthase subunit alpha [Capra hircus]
          Length = 553

 Score =  174 bits (440), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 84/118 (71%), Positives = 98/118 (83%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLE+AQYREVAAFAQFGSDLDAA QQLL+RGVRLTELL+QGQY P AIEEQVAVIY G 
Sbjct: 433 LKLEMAQYREVAAFAQFGSDLDAAAQQLLSRGVRLTELLEQGQYSPTAIEEQVAVIYAGG 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLAN 118
           RG LDKL+P KIT FE  FL+H+ S  + LL  I+ +GKI+E+ DAKLK +VTNF+A 
Sbjct: 493 RGCLDKLEPRKITKFENAFLSHVISQHQALLGKIRTDGKISEEADAKLKEIVTNFMAG 550


>gi|256070850|ref|XP_002571755.1| ATP synthase alpha subunit mitochondrial [Schistosoma mansoni]
 gi|353232990|emb|CCD80345.1| putative atp synthase alpha subunit mitochondrial [Schistosoma
           mansoni]
          Length = 547

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/119 (68%), Positives = 100/119 (84%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQ LLNRGVRLTELLKQ QY PMAIE+QV VIY GV
Sbjct: 425 MKLELAQYREVAAFAQFGSDLDASTQSLLNRGVRLTELLKQNQYAPMAIEQQVVVIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDKLDP+KI  FEK+FL  + ++ + LL++I+++G++   TD KLK +V +FLA +
Sbjct: 485 RGHLDKLDPSKIIHFEKDFLKFVLANHQDLLKTIREDGELKPATDEKLKKIVVDFLAGY 543


>gi|397518771|ref|XP_003829554.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit alpha,
           mitochondrial-like [Pan paniscus]
          Length = 518

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/119 (71%), Positives = 97/119 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ REVAAFAQFGSDLDA TQQLL+ GVRLTELLKQGQY PM  E+QVAVI  GV
Sbjct: 398 MKLELAQDREVAAFAQFGSDLDAPTQQLLSHGVRLTELLKQGQYPPMVTEQQVAVICAGV 457

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S    LL +I+ +GKI+ED+DAKL   VTNFLA F
Sbjct: 458 RGYLDKLEPSKITKFENAFLSHVVSQRXALLGTIRADGKISEDSDAKLMEXVTNFLAGF 516


>gi|355670473|gb|AER94760.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1 [Mustela putorius furo]
          Length = 149

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 99/124 (79%), Gaps = 6/124 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY G 
Sbjct: 23  MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGG 82

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES------IKKEGKITEDTDAKLKTVVTN 114
           RG+LDKL P +IT FE  FLA + S  + LL +      I+ +GKI+E +DA+LK  VTN
Sbjct: 83  RGYLDKLKPGRITKFEHAFLACVISQHQALLGTEGRMGNIRTDGKISEQSDAELKETVTN 142

Query: 115 FLAN 118
           FLA 
Sbjct: 143 FLAG 146


>gi|326913988|ref|XP_003203312.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 117

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 84/94 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 24  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 83

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI 94
           RGHLDKL+P+KIT FE  FLAH+ S    LL +I
Sbjct: 84  RGHLDKLEPSKITKFESAFLAHVLSQHEALLSTI 117


>gi|207367132|dbj|BAG72086.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [Gekko hokouensis]
          Length = 170

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/93 (86%), Positives = 85/93 (91%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P+KIT FEK FLAH+ S  + LL +
Sbjct: 138 RGHLDKLEPSKITKFEKAFLAHVLSQHQALLST 170


>gi|440923716|pdb|1OHH|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
          Length = 487

 Score =  167 bits (423), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 97/119 (81%), Gaps = 8/119 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVA        LDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 367 MKLELAQYREVA--------LDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 418

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL  I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 419 RGYLDKLEPSKITKFENAFLSHVISQHQALLGKIRTDGKISEESDAKLKEIVTNFLAGF 477


>gi|118562412|dbj|BAF37669.1| ATP synthase alpha subunit [Elaphe quadrivirgata]
          Length = 170

 Score =  167 bits (422), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 80/93 (86%), Positives = 86/93 (92%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P+KIT FE+ FLAH+ SS + LL +
Sbjct: 138 RGHLDKLEPSKITKFEQAFLAHVISSHQPLLTT 170


>gi|115334568|dbj|BAF33274.1| mitochondrial ATP synthase alpha subunit isoform 1 [Eudromia
           elegans]
          Length = 170

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 84/93 (90%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +
Sbjct: 138 RGHLDKLEPSKITKFESAFLAHVLSQHQALLST 170


>gi|115334536|dbj|BAF33258.1| mitochondrial ATP synthase alpha subunit isoform 1 [Struthio
           camelus]
          Length = 170

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 83/93 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P KIT FE  FLAH+ S  + LL +
Sbjct: 138 RGHLDKLEPGKITKFESAFLAHVLSQHQALLST 170


>gi|326433589|gb|EGD79159.1| ATP synthase subunit alpha isoform [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 101/119 (84%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ+LLNRG+RLTELLKQGQYVPM+ E+QV V++ GV
Sbjct: 414 MKLELAQYREVAAFAQFGSDLDAATQRLLNRGIRLTELLKQGQYVPMSFEDQVVVLFSGV 473

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD++DP+KIT FE++FL H++++ + +L  I ++G++T+ T+ KL  V   F+ ++
Sbjct: 474 RGYLDEIDPSKITDFEQKFLPHVQNNHKEILTDIAQKGELTQATEEKLNKVCDEFVKSY 532


>gi|167535694|ref|XP_001749520.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771912|gb|EDQ85571.1| predicted protein [Monosiga brevicollis MX1]
          Length = 601

 Score =  164 bits (414), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRG RLTELLKQGQYVPM IEEQV VI+ GV
Sbjct: 481 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGARLTELLKQGQYVPMPIEEQVVVIFAGV 540

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD +D  KI  FEK FL  +K++ + +L++I KEG +++  +AKL  +  +F+A F 
Sbjct: 541 RGFLDAVDTNKIVAFEKAFLPFVKANHQDVLDTIAKEGALSDAMEAKLGDICKSFVAEFN 600


>gi|118562420|dbj|BAF37673.1| ATP synthase alpha subunit [Pelodiscus sinensis]
          Length = 170

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/93 (83%), Positives = 83/93 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYAPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +
Sbjct: 138 RGHLDKLEPSKITKFESAFLAHVLSQHQALLTT 170


>gi|118562398|dbj|BAF37662.1| ATP synthase alpha subunit [Crocodylus siamensis]
          Length = 170

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/93 (83%), Positives = 83/93 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTE LKQGQYVPMAIEEQVAVIY GV
Sbjct: 78  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTEPLKQGQYVPMAIEEQVAVIYAGV 137

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLES 93
           RGHLDKL+P+KIT FE  FLAH+ S  + LL +
Sbjct: 138 RGHLDKLEPSKITKFESAFLAHVLSQHQALLAT 170


>gi|320164979|gb|EFW41878.1| ATP synthase alpha subunit [Capsaspora owczarzaki ATCC 30864]
          Length = 490

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 99/120 (82%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ+LLNRG RLTELLKQ QY P+ +E Q+ +I+ GV
Sbjct: 371 MKLELAQYREVAAFAQFGSDLDAATQELLNRGTRLTELLKQRQYTPLPVELQICIIFAGV 430

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDKL+P+K+T FE+++  HI+++ + +LE+I+ E +I+  T+ KLK +V +FLA F 
Sbjct: 431 RGYLDKLEPSKVTKFEEQYSRHIQANHQDVLETIRTEKQISPATNDKLKKIVVDFLATFN 490


>gi|257465775|dbj|BAI23356.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [Leiolepis reevesii
           rubritaeniata]
          Length = 169

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/83 (92%), Positives = 79/83 (95%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GV
Sbjct: 87  MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGV 146

Query: 61  RGHLDKLDPAKITTFEKEFLAHI 83
           RGHLDKL+P+KIT FE  FLAHI
Sbjct: 147 RGHLDKLEPSKITKFESAFLAHI 169


>gi|330813462|ref|YP_004357701.1| ATP synthase subunit alpha [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486557|gb|AEA80962.1| ATP synthase alpha chain [Candidatus Pelagibacter sp. IMCC9063]
          Length = 511

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQQLLNRG +LTELLKQGQY P+ +EEQV  I+CGV
Sbjct: 391 IKLELAQYREMAAFAQFGSDLDASTQQLLNRGAKLTELLKQGQYSPLKVEEQVISIFCGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD ++ ++I  FE   L+ IKS    +LE+I K GK+ E  +AKLK+ + NF   F
Sbjct: 451 RGYLDNIETSRIKDFESGLLSQIKSDSPDILENINKTGKLDESNEAKLKSFIENFKNKF 509


>gi|406863219|gb|EKD16267.1| ATP synthase F1 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 668

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/120 (63%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 549 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 608

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FLAH+K++E  LL +I KEG +++D +AKLK V+T F  +F 
Sbjct: 609 NGHLDSIPVAKILQWEADFLAHLKTNETDLLATIDKEGALSKDLEAKLKGVITTFTKSFN 668


>gi|156050597|ref|XP_001591260.1| hypothetical protein SS1G_07886 [Sclerotinia sclerotiorum 1980]
 gi|154692286|gb|EDN92024.1| hypothetical protein SS1G_07886 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 284

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 94/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 165 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 224

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   KI T+E +FL+H+K++E  LL +I KEG +++D +A+LK VVT+F  +F
Sbjct: 225 NGHLDSVPVNKILTWEADFLSHLKTNEADLLATIDKEGALSKDLEARLKDVVTSFTKSF 283


>gi|154251916|ref|YP_001412740.1| ATP synthase F1 subunit alpha [Parvibaculum lavamentivorans DS-1]
 gi|171769589|sp|A7HT50.1|ATPA_PARL1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154155866|gb|ABS63083.1| ATP synthase F1, alpha subunit [Parvibaculum lavamentivorans DS-1]
          Length = 509

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQGQ+ P+ +EEQV VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQGQFSPLKVEEQVVVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  +E++ L +I+SS  G+L++I+ E +I+ DT+AKLK+ V NF   F 
Sbjct: 450 NGYLDKLPVADVGRYEQDLLRNIRSSHPGILDAIRSEKQISADTEAKLKSAVENFSKAFA 509


>gi|358334394|dbj|GAA41064.2| F-type H+-transporting ATPase subunit alpha, partial [Clonorchis
           sinensis]
          Length = 546

 Score =  154 bits (389), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 87/97 (89%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQ  LNRGVRLTELLKQGQYVPMAIE+QV VIY GV
Sbjct: 407 MKLELAQYREVAAFAQFGSDLDAATQLQLNRGVRLTELLKQGQYVPMAIEQQVVVIYAGV 466

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE 97
           RG+LDKLDP+KIT FE++FL  + ++ + LL++I++E
Sbjct: 467 RGYLDKLDPSKITQFEQDFLKFVLANHQDLLKTIREE 503


>gi|296423744|ref|XP_002841413.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637651|emb|CAZ85604.1| unnamed protein product [Tuber melanosporum]
          Length = 358

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 4/123 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+  LNRG RLTELLKQ QY PMA+EEQV +IY GV
Sbjct: 235 LKLFLAQYREVAAFAQFGSDLDASTKSTLNRGERLTELLKQKQYSPMAVEEQVPLIYAGV 294

Query: 61  RGHLDKLDPAKITTFEK----EFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            GHLD +   KI  FE+     FLAH++++E GLL +I KEG ++++TDAKLK V+  F+
Sbjct: 295 NGHLDNVPVNKIGRFEEGKSSNFLAHLRTNESGLLATINKEGALSKETDAKLKDVIVTFV 354

Query: 117 ANF 119
            +F
Sbjct: 355 QSF 357


>gi|342879531|gb|EGU80776.1| hypothetical protein FOXB_08643 [Fusarium oxysporum Fo5176]
          Length = 617

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 497 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQRQYSPMAVNEMVPLIFAGV 556

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FLAH+K++E  LL +I KEG I++DT+AKL+ V  +F+ +F 
Sbjct: 557 NGHLDTVPVNKILQWESDFLAHLKTNESELLATIDKEGAISKDTEAKLRDVTQSFVKSFL 616

Query: 121 G 121
           G
Sbjct: 617 G 617


>gi|225679315|gb|EEH17599.1| ATP5A1 protein [Paracoccidioides brasiliensis Pb03]
          Length = 199

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 79  LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYQPMAVNEMVPLIYAGV 138

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FLAH+KS+E  +LE I+KEG++++D +A+LK V+  F  +F+
Sbjct: 139 NGHLDSIPVAKILQWESDFLAHLKSNEPEVLEKIEKEGQLSKDLEAQLKDVIVAFNKSFS 198


>gi|361128638|gb|EHL00568.1| putative ATP synthase subunit alpha, mitochondrial [Glarea
           lozoyensis 74030]
          Length = 555

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI T+E +F++H++++E  LL +I KEG +++D +AKLK VV +F  +FT
Sbjct: 496 NGHLDTVPVDKILTWEADFISHLRTNESDLLATIDKEGALSKDLEAKLKDVVVSFTKSFT 555


>gi|345566808|gb|EGX49750.1| hypothetical protein AOL_s00078g239 [Arthrobotrys oligospora ATCC
           24927]
          Length = 549

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 95/119 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+  L RG RLTELLKQ QY PM +EEQ+ +I+ GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDASTKSTLARGERLTELLKQPQYTPMGVEEQIPLIFAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLDK+   KI  FE++FLAH+KSSE GLLE ++ +G ++++ + KL  VV++F+ +F
Sbjct: 490 RGHLDKVPVNKIQAFERDFLAHLKSSEAGLLEELRTKGVLSKELEDKLTAVVSSFVKSF 548


>gi|154308715|ref|XP_001553693.1| hypothetical protein BC1G_07780 [Botryotinia fuckeliana B05.10]
          Length = 561

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 442 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 501

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   KI  +E +F++H+K++E  LL +I KEG +++D +AKLK VVT+F  +F
Sbjct: 502 NGHLDSVPVNKILQWEADFISHLKTNESDLLATIDKEGALSKDLEAKLKDVVTSFTKSF 560


>gi|347831814|emb|CCD47511.1| similar to ATP synthase subunit alpha [Botryotinia fuckeliana]
          Length = 554

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 435 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   KI  +E +F++H+K++E  LL +I KEG +++D +AKLK VVT+F  +F
Sbjct: 495 NGHLDSVPVNKILQWEADFISHLKTNESDLLATIDKEGALSKDLEAKLKDVVTSFTKSF 553


>gi|226291035|gb|EEH46463.1| ATPase alpha subunit [Paracoccidioides brasiliensis Pb18]
          Length = 556

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYQPMAVNEMVPLIYAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FLAH+KS+E  +LE I+KEG++++D +A+LK V+  F  +F+
Sbjct: 496 NGHLDSIPVAKILQWESDFLAHLKSNEPEVLEKIEKEGQLSKDLEAQLKDVIVAFNKSFS 555


>gi|429862516|gb|ELA37162.1| ATP synthase alpha mitochondrial precursor [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 501

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L+RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 381 LKLFLAQYREVAAFAQFGSDLDASTKQTLSRGERLTELLKQKQYSPMAVNEMVPLIFAGV 440

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FLAH+K++E  LL +I KEG +++D +A+LK V+TNF  +F 
Sbjct: 441 NGHLDNVPVGKILQWEADFLAHLKTNESDLLATIDKEGALSKDLEARLKEVITNFTKSFL 500

Query: 121 G 121
           G
Sbjct: 501 G 501


>gi|295665480|ref|XP_002793291.1| ATPase alpha subunit [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278205|gb|EEH33771.1| ATPase alpha subunit [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 465

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 345 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYQPMAVNEMVPLIYAGV 404

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FLAH+KS+E  +LE I+KEG++++D +A+LK V+  F  +F+
Sbjct: 405 NGHLDSIPVAKILQWESDFLAHLKSNEPEVLEKIEKEGQLSKDLEAQLKDVIVAFNKSFS 464


>gi|145516222|ref|XP_001444005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411405|emb|CAK76608.1| unnamed protein product [Paramecium tetraurelia]
          Length = 530

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 94/116 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQQLLNRG +LTELLKQ QYVPM  EEQV VIY GV
Sbjct: 406 LKLELAQYREVAAFAQFGSDLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGV 465

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG LDK+  ++I  FE++FL H++++   +LE I+  G++++  DA+LK+++  F+
Sbjct: 466 RGFLDKVQTSEIAIFEEKFLTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 521


>gi|145524553|ref|XP_001448104.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415637|emb|CAK80707.1| unnamed protein product [Paramecium tetraurelia]
          Length = 526

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 94/116 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQQLLNRG +LTELLKQ QYVPM  EEQV VIY GV
Sbjct: 402 LKLELAQYREVAAFAQFGSDLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGV 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG LDK+  ++I  FE++FL H++++   +LE I+  G++++  DA+LK+++  F+
Sbjct: 462 RGFLDKVQTSEIAKFEEKFLTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 517


>gi|145523559|ref|XP_001447616.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415131|emb|CAK80219.1| unnamed protein product [Paramecium tetraurelia]
          Length = 536

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 94/116 (81%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQQLLNRG +LTELLKQ QYVPM  EEQV VIY GV
Sbjct: 412 LKLELAQYREVAAFAQFGSDLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGV 471

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG LDK+  ++I  FE++FL H++++   +LE I+  G++++  DA+LK+++  F+
Sbjct: 472 RGFLDKVQTSEIAKFEEKFLTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 527


>gi|408390026|gb|EKJ69442.1| hypothetical protein FPSE_10375 [Fusarium pseudograminearum CS3096]
          Length = 552

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/121 (62%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVTEMVPLIFAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH+K++E  LL +I KEG I++DT+AKLK VV +F+ +F 
Sbjct: 492 NGFLDTIPVNKILQWESDFLAHLKTNETELLATIDKEGAISKDTEAKLKDVVQSFVKSFL 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|440912711|gb|ELR62258.1| hypothetical protein M91_17182 [Bos grunniens mutus]
          Length = 425

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/120 (63%), Positives = 89/120 (74%), Gaps = 3/120 (2%)

Query: 3   LELAQYREVA---AFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCG 59
           L ++  R  A      QF SDLDAATQQLL+ GV LTELLKQGQY PMAIEEQVAVIY G
Sbjct: 304 LSVSHVRSAAQTRVMKQFDSDLDAATQQLLSHGVHLTELLKQGQYSPMAIEEQVAVIYAG 363

Query: 60  VRGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           VRG+LDKL+P+KIT FE  FL+H+ S  + LL   +  GK +E+TDAKLK +VTNFLA F
Sbjct: 364 VRGYLDKLEPSKITKFENAFLSHVISQHQALLGKTRTNGKFSEETDAKLKEIVTNFLAGF 423


>gi|452988083|gb|EME87838.1| hypothetical protein MYCFIDRAFT_213038 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 550

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/120 (61%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FL H+KS+E  LLE I KEG +++D + KLK VV NF  +F+
Sbjct: 491 NGHLDSVPVNKILQWEADFLNHLKSNESALLEQIDKEGSLSKDLEGKLKDVVVNFTKSFS 550


>gi|313227709|emb|CBY22857.1| unnamed protein product [Oikopleura dioica]
          Length = 534

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+REVAAFAQFGSD+DAATQQ L RG RLTELLKQ QY PM +  QV VIY GV
Sbjct: 414 MKLDLAQFREVAAFAQFGSDMDAATQQQLARGTRLTELLKQNQYEPMDVATQVCVIYTGV 473

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGHLD + P ++T FE +F+ H++S++  LL  I + G +TE  + KLKTV+ +FL  +T
Sbjct: 474 RGHLDVIKPDQVTDFEAKFVDHLRSAQTELLNGISEGGVLTEALEEKLKTVIADFLVTYT 533


>gi|213512628|ref|NP_001133132.1| ATP synthase subunit alpha, mitochondrial [Salmo salar]
 gi|197632057|gb|ACH70752.1| ATP synthase H+ transporting mitochondrial F1 complex alpha subunit
           1 [Salmo salar]
          Length = 528

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/77 (92%), Positives = 73/77 (94%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GV
Sbjct: 433 MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVTVIYAGV 492

Query: 61  RGHLDKLDPAKITTFEK 77
           RGHLDK+DP+KIT FEK
Sbjct: 493 RGHLDKMDPSKITRFEK 509


>gi|145528251|ref|XP_001449925.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417514|emb|CAK82528.1| unnamed protein product [Paramecium tetraurelia]
          Length = 522

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 92/112 (82%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQQLLNRG +LTELLKQ QYVPM  EEQV VIY GV
Sbjct: 406 LKLELAQYREVAAFAQFGSDLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGV 465

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
           RG LDK+  ++I  FE++FL H++++   +LE I+  G++++  DA+LK+++
Sbjct: 466 RGFLDKVQTSEIAKFEEKFLTHLRTNYPAMLERIRSTGELSKQDDAELKSIL 517


>gi|171696284|ref|XP_001913066.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948384|emb|CAP60548.1| unnamed protein product [Podospora anserina S mat+]
          Length = 549

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 429 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD++  AKI  +E +FL+H+K++E  LL +I+KEG I++D +A+LK V++ F   F 
Sbjct: 489 NGFLDQVPVAKILQWEADFLSHLKTNEADLLATIEKEGAISKDLEARLKDVISTFTKGFL 548

Query: 121 G 121
           G
Sbjct: 549 G 549


>gi|229890805|emb|CAY56619.1| ATP synthase subunit alpha, mitochondrial precursor [Psetta
          maxima]
          Length = 94

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/89 (79%), Positives = 78/89 (87%)

Query: 6  AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLD 65
          AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQY PMAIEEQV VIY GVRGHLD
Sbjct: 5  AQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYCPMAIEEQVTVIYAGVRGHLD 64

Query: 66 KLDPAKITTFEKEFLAHIKSSERGLLESI 94
          K++P+KIT FEK FL H+ S  + LL ++
Sbjct: 65 KMEPSKITKFEKAFLQHVLSQHQDLLGAV 93


>gi|378732950|gb|EHY59409.1| ATP synthase subunit alpha, mitochondrial [Exophiala dermatitidis
           NIH/UT8656]
          Length = 556

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/120 (60%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 437 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 496

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FLAH+K+ +  LL  I KEG++++D + +LK VV NF  +F+
Sbjct: 497 NGHLDSIPVNKILQWEADFLAHLKNDQAELLSRIDKEGQLSKDLEQQLKEVVVNFTKSFS 556


>gi|449019970|dbj|BAM83372.1| mitochondrial F-type ATPase F1 subunit alpha, precursor
           [Cyanidioschyzon merolae strain 10D]
          Length = 564

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REVAAFAQFGSDLDAATQQLLNRG RL ELLKQGQY PM  EEQV VIY GV
Sbjct: 443 MKLELAQHREVAAFAQFGSDLDAATQQLLNRGDRLNELLKQGQYKPMPFEEQVCVIYGGV 502

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+  ++I  +E   L +++S+   LL  I++EG++++++D  L+ ++T F+A F
Sbjct: 503 RGLLDKVPVSRIREYEAAMLQNMRSNHGDLLAKIRQEGQLSKESDEALRKILTEFIATF 561


>gi|380487474|emb|CCF38018.1| ATP synthase subunit alpha [Colletotrichum higginsianum]
          Length = 555

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 93/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L+RG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 435 LKLFLAQYREVAAFAQFGSDLDASTKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FL H++++E  L+ +I KEG +++D +A+LK VV +F  +F 
Sbjct: 495 NGHLDNVPVAKILQWESDFLGHLRTNESDLIATIDKEGALSKDLEARLKDVVVSFTKSFL 554

Query: 121 G 121
           G
Sbjct: 555 G 555


>gi|358379905|gb|EHK17584.1| hypothetical protein TRIVIDRAFT_88676 [Trichoderma virens Gv29-8]
          Length = 551

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGI 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   +I  +E +FLAH+K++E  LL +I KEG +++D +A+LK V  NF+ +F
Sbjct: 491 NGHLDSIPVDQILKWEADFLAHLKTNESDLLATIDKEGALSKDLEARLKDVTVNFVKSF 549


>gi|440632111|gb|ELR02030.1| ATP synthase subunit alpha, mitochondrial [Geomyces destructans
           20631-21]
          Length = 555

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 435 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   KI T+E +FLAH+K++E+ LLE++ KEG +++D + +LK  V +F  +F
Sbjct: 495 NGHLDSVPVDKILTWEADFLAHLKTNEQSLLETLDKEGALSKDLEGRLKESVVSFTKSF 553


>gi|402820266|ref|ZP_10869833.1| hypothetical protein IMCC14465_10670 [alpha proteobacterium
           IMCC14465]
 gi|402511009|gb|EJW21271.1| hypothetical protein IMCC14465_10670 [alpha proteobacterium
           IMCC14465]
          Length = 510

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG +LTELLKQGQ+ P+  EEQV VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGAKLTELLKQGQFSPLQAEEQVVVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  A +  FE+E L+H+ + E  LL +I+ E  +++DT++KLK+V+ +F A F
Sbjct: 450 NGYLDDLPVASVGRFEEELLSHVHTKESDLLSTIRTEKALSDDTESKLKSVIESFAAKF 508


>gi|310795840|gb|EFQ31301.1| ATP synthase F1 [Glomerella graminicola M1.001]
          Length = 567

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L+RG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 447 LKLFLAQYREVAAFAQFGSDLDASTKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGV 506

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FL+H++++E  ++ +I KEG +++D +A+LK ++T F  +F 
Sbjct: 507 NGHLDSVPVAKILQWEADFLSHLRTNEADVMATIDKEGALSKDLEARLKDIITTFTKSFL 566

Query: 121 G 121
           G
Sbjct: 567 G 567


>gi|74146998|dbj|BAE27439.1| unnamed protein product [Mus musculus]
          Length = 518

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 83/97 (85%)

Query: 23  AATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAH 82
           AATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GVRG+LDKL+P+KIT FE  FL+H
Sbjct: 420 AATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSH 479

Query: 83  IKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           + S  + LL +I+ +GKI+E +DAKLK +VTNFLA F
Sbjct: 480 VISQHQSLLGNIRSDGKISEQSDAKLKEIVTNFLAGF 516


>gi|336272648|ref|XP_003351080.1| hypothetical protein SMAC_05959 [Sordaria macrospora k-hell]
 gi|380093639|emb|CCC08603.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 551

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E +FLAH+K++E  ++ +I KEG I++D +A L+ V+ NF  +F 
Sbjct: 491 NGFLDSVPVAKILQWEADFLAHLKTNESEIMATIDKEGAISKDLEANLRDVIQNFTKSFL 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|119188523|ref|XP_001244868.1| hypothetical protein CIMG_04309 [Coccidioides immitis RS]
 gi|392867776|gb|EAS33472.2| ATP synthase subunit alpha, mitochondrial [Coccidioides immitis RS]
          Length = 555

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FLAH+K++E  +LE I KEG++++D +A+LK ++  F  +F+
Sbjct: 496 NGHLDSIPVKKILQWEADFLAHLKANEAEVLEKIDKEGQLSKDLEAQLKDIIVAFNKSFS 555


>gi|303323773|ref|XP_003071878.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111580|gb|EER29733.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320031831|gb|EFW13789.1| ATP synthase subunit alpha [Coccidioides posadasii str. Silveira]
          Length = 555

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FLAH+K++E  +LE I KEG++++D +A+LK ++  F  +F+
Sbjct: 496 NGHLDSIPVKKILQWEADFLAHLKANEAEVLEKIDKEGQLSKDLEAQLKDIIVAFNKSFS 555


>gi|154283693|ref|XP_001542642.1| ATP synthase alpha chain liver isoform, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
 gi|150410822|gb|EDN06210.1| ATP synthase alpha chain liver isoform, mitochondrial precursor
           [Ajellomyces capsulatus NAm1]
          Length = 327

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 208 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 267

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  +KI  +E +FLAH+K++E  LL+SI+KEG+++++ +A+LK V   F  +F+
Sbjct: 268 NGHLDSIPVSKIQQWETDFLAHLKTNESELLQSIEKEGQLSKELEAQLKEVTVAFNKSFS 327


>gi|452847170|gb|EME49102.1| hypothetical protein DOTSEDRAFT_67980 [Dothistroma septosporum
           NZE10]
          Length = 550

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYQPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +   KI  +E +FL H+K++E  LLE I K+G +++D + KLK VV +F  NF+
Sbjct: 491 NGHLDSVPVNKILQWEADFLNHLKTNESALLEQIDKDGALSKDLEGKLKDVVQSFTKNFS 550


>gi|389630624|ref|XP_003712965.1| ATP synthase subunit alpha [Magnaporthe oryzae 70-15]
 gi|351645297|gb|EHA53158.1| ATP synthase subunit alpha [Magnaporthe oryzae 70-15]
 gi|440475689|gb|ELQ44354.1| ATP synthase subunit alpha liver isoform [Magnaporthe oryzae Y34]
 gi|440479844|gb|ELQ60583.1| ATP synthase subunit alpha liver isoform [Magnaporthe oryzae P131]
          Length = 551

 Score =  147 bits (371), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +  AKI  +E +FL+H+K++E  LL +I+KEG I++D +A+L+ VV +F  +F
Sbjct: 491 NGFLDNVPVAKILQWEADFLSHLKTNESDLLATIEKEGAISKDLEARLRDVVGSFTKSF 549


>gi|396472469|ref|XP_003839122.1| similar to ATP synthase subunit alpha [Leptosphaeria maculans JN3]
 gi|312215691|emb|CBX95643.1| similar to ATP synthase subunit alpha [Leptosphaeria maculans JN3]
          Length = 549

 Score =  147 bits (371), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYTPMAVNEMVPLIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+  +E +FLAH+KS+E+ LL +I +EG +++D ++KLK V T+F  +F
Sbjct: 490 NGILDKVPVNKVLQWEADFLAHLKSNEQELLNTIDREGALSKDIESKLKEVATSFTKSF 548


>gi|262277905|ref|ZP_06055698.1| ATP synthase F1, alpha subunit [alpha proteobacterium HIMB114]
 gi|262225008|gb|EEY75467.1| ATP synthase F1, alpha subunit [alpha proteobacterium HIMB114]
          Length = 510

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQQLLNRG +LTELLKQGQY P+ +EEQV  I+ GV
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQQLLNRGSKLTELLKQGQYSPLKVEEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D +KI  FE + L+ IKS    +L +I   GK+ E  +AKLK  +TNF   F
Sbjct: 450 KGFLDDIDNSKIKDFEDQLLSAIKSQAPDILSNIVSSGKLDEANEAKLKDFITNFKKEF 508


>gi|85119497|ref|XP_965645.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|584806|sp|P37211.1|ATPA_NEUCR RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|168759|gb|AAA33560.1| mitochondrial ATPase alpha-subunit [Neurospora crassa]
 gi|28927457|gb|EAA36409.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 551

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E +FLAH+K++E  ++ +I KEG I++D +AKL+ V+  F  +F 
Sbjct: 491 NGFLDSVPVAKILQWEADFLAHLKTNEPEIMATIDKEGAISKDLEAKLRDVIQTFTKSFL 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|322708625|gb|EFZ00202.1| ATP synthase alpha chain [Metarhizium anisopliae ARSEF 23]
          Length = 552

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  +KI  +E ++LAH+K++E  LL +I+KEG I+++ +AKLK V  +F+ +F 
Sbjct: 492 NGYLDNVPVSKILQWESDYLAHLKANEADLLNTIEKEGAISKELEAKLKDVTQSFIKSFL 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|452825329|gb|EME32326.1| F-type H+-transporting ATPase subunit alpha [Galdieria sulphuraria]
          Length = 527

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+REVAAFAQFGSDLDA+TQQLLNRG RL ELLKQGQY PM +EEQV  +Y GV
Sbjct: 407 MKLDLAQHREVAAFAQFGSDLDASTQQLLNRGDRLNELLKQGQYSPMPVEEQVVCLYAGV 466

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+ DK+  + +   E+EFL  ++++ + +L+SI+KE  +TE  D +LK  +T FL  F
Sbjct: 467 RGYFDKIPVSAVRKAEEEFLELVRNNRKDILDSIRKELSLTEWADNELKKTITGFLETF 525


>gi|169766380|ref|XP_001817661.1| ATP synthase subunit alpha [Aspergillus oryzae RIB40]
 gi|238483087|ref|XP_002372782.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
 gi|83765516|dbj|BAE55659.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220700832|gb|EED57170.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
 gi|391864757|gb|EIT74051.1| F0F1-type ATP synthase, alpha subunit [Aspergillus oryzae 3.042]
          Length = 556

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PM++ + V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMSVSDMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  AKI  +E +FLAH+KS+   + E+I+KEG+++++T+A LK ++ +F  +F 
Sbjct: 496 NGHLDNIPVAKILQWESDFLAHLKSNNPEIQEAIEKEGQVSKETEASLKEIIQSFNKSFN 555


>gi|240275579|gb|EER39093.1| ATP synthase subunit alpha [Ajellomyces capsulatus H143]
          Length = 522

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 403 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 462

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  +KI  +E +FLAH+K++E  LL++I+KEG+++++ +A+LK V   F  +F+
Sbjct: 463 NGHLDSIPVSKIQQWETDFLAHLKANESELLQTIEKEGQLSKELEAQLKDVTVAFNKSFS 522


>gi|336464917|gb|EGO53157.1| mitochondrial ATPase alpha-subunit [Neurospora tetrasperma FGSC
           2508]
 gi|350297023|gb|EGZ78000.1| ATP synthase subunit alpha, mitochondrial [Neurospora tetrasperma
           FGSC 2509]
          Length = 551

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E +FLAH+K++E  ++ +I KEG I++D +AKL+ V+  F  +F 
Sbjct: 491 NGFLDTVPVAKILQWEADFLAHLKTNEPEIMATIDKEGAISKDLEAKLRDVIQTFTKSFL 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|225561966|gb|EEH10246.1| ATP synthase alpha subunit [Ajellomyces capsulatus G186AR]
          Length = 554

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 435 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  +KI  +E +FLAH+K++E  LL++I+KEG+++++ +A+LK V   F  +F+
Sbjct: 495 NGHLDSIPVSKIQQWETDFLAHLKANESELLQTIEKEGQLSKELEAQLKDVTVAFNKSFS 554


>gi|59802944|gb|AAX07676.1| ATP synthase alpha chain-like protein [Magnaporthe grisea]
          Length = 551

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +  AKI  +E +FL+H+K++E  LL +I+KEG I++D +A+L+ VV +F  +F
Sbjct: 491 NGFLDYVPVAKILQWEADFLSHLKTNESDLLATIEKEGAISKDLEARLRDVVGSFTKSF 549


>gi|407929478|gb|EKG22307.1| hypothetical protein MPH_00374 [Macrophomina phaseolina MS6]
          Length = 552

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 433 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +  +KI  +E +F+AH+K++E  LL  I++EG ++++ + KLK VV  F  +F
Sbjct: 493 NGHLDNVPVSKILQWEADFIAHLKTNESELLAQIEREGALSKELEGKLKDVVQAFTKSF 551


>gi|325091408|gb|EGC44718.1| ATP synthase subunit alpha [Ajellomyces capsulatus H88]
          Length = 466

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 347 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 406

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +  +KI  +E +FLAH+K++E  LL++I+KEG+++++ +A+LK V   F  +F+
Sbjct: 407 NGHLDSIPVSKIQQWETDFLAHLKANESELLQTIEKEGQLSKELEAQLKDVTVAFNKSFS 466


>gi|320586950|gb|EFW99613.1| mitochondrial f1 ATPase subunit [Grosmannia clavigera kw1407]
          Length = 348

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 228 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 287

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI T+E +FLAH+K++E  LL +I KEG +++D +AKL++ +  F  +F+
Sbjct: 288 NGFLDTIPVDKILTWEADFLAHLKTNETELLATIDKEGALSKDLEAKLRSTIEIFTKSFS 347

Query: 121 G 121
            
Sbjct: 348 A 348


>gi|304320612|ref|YP_003854255.1| ATP synthase subunit A [Parvularcula bermudensis HTCC2503]
 gi|303299514|gb|ADM09113.1| ATP synthase subunit A [Parvularcula bermudensis HTCC2503]
          Length = 510

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ  LNRG RLTELLKQ QY P+ +EEQVAVI+ G 
Sbjct: 391 IKGELAQYRELAAFAQFGSDLDAATQATLNRGARLTELLKQPQYSPLQVEEQVAVIFAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+  +K+T FE EFL H++++  GLL  I+ E K++++ + +L  ++  F+ NF
Sbjct: 451 RGYLDKVSVSKVTDFEAEFLRHMRNNHGGLLAKIRDEKKMSDEIEKELAGILDKFVQNF 509


>gi|302925952|ref|XP_003054197.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735138|gb|EEU48484.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 552

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIFAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+K++E  L+ +I KEG ++++T+AKL+ VV  F+ +F 
Sbjct: 492 NGYLDTVPVNKILQWESDFLAHLKTNEADLIATIDKEGALSKETEAKLRDVVQTFVKSFL 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|344229528|gb|EGV61413.1| hypothetical protein CANTEDRAFT_124062 [Candida tenuis ATCC 10573]
          Length = 545

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 96/119 (80%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY PMA EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQNQYSPMAAEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD ++ ++I  FE  FL+H+KSSE  +L++I+++G+++++  AKLKTV  +F+A+F
Sbjct: 487 NGFLDAVELSRIGEFEDAFLSHLKSSEAEILDTIREKGELSKEALAKLKTVTESFVASF 545


>gi|19115831|ref|NP_594919.1| F1-ATPase alpha subunit [Schizosaccharomyces pombe 972h-]
 gi|114526|sp|P24487.1|ATPA_SCHPO RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|173347|gb|AAA35286.1| ATP-synthase alpha-subunit [Schizosaccharomyces pombe]
 gi|2330687|emb|CAB11207.1| F1-ATPase alpha subunit [Schizosaccharomyces pombe]
          Length = 536

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 95/119 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVA+FAQFGSDLDA T+  L+RG+RLTELLKQ QY P+A+EEQV +IYCGV
Sbjct: 418 IKLFLAQYREVASFAQFGSDLDAGTRATLDRGLRLTELLKQPQYSPLAVEEQVPLIYCGV 477

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+   ++  FE +F+ +++SS   ++E+I+KEG +++ T+  LK V+  FL++F
Sbjct: 478 KGYLDKIPVDRVVEFEHKFIPYLRSSGAEIMEAIRKEGVLSKTTEDSLKAVIKEFLSSF 536


>gi|403359601|gb|EJY79464.1| ATP synthase subunit alpha [Oxytricha trifallax]
          Length = 554

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 93/116 (80%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDA+TQ LLNRG +LTELLKQ QYVPM  EEQV V+Y GV
Sbjct: 430 LKLELAQYREVAAFAQFGSDLDASTQHLLNRGEKLTELLKQKQYVPMVAEEQVCVLYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG+LDK+  ++I  FEK FL H+K+    +L++I+ E  +++ T+++LK+++  F+
Sbjct: 490 RGYLDKIMTSEIGKFEKLFLEHLKTKYPHILDTIRSEKALSDKTNSELKSILEEFM 545


>gi|322696841|gb|EFY88627.1| ATP synthase alpha chain precursor [Metarhizium acridum CQMa 102]
          Length = 778

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/121 (58%), Positives = 94/121 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 658 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIFAGV 717

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  +KI  +E ++LAH+K++E  LL +I+KEG I+++ +AKLK V  +F+ +F 
Sbjct: 718 NGYLDNVPVSKILQWESDYLAHLKANEAELLNTIEKEGAISKELEAKLKDVTQSFIKSFL 777

Query: 121 G 121
           G
Sbjct: 778 G 778


>gi|453088967|gb|EMF17007.1| ATP synthase alpha chain mitochondrial precursor [Mycosphaerella
           populorum SO2202]
          Length = 551

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDAATKQTLQRGERLTELLKQKQYQPMAVNEMVPLIFAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  +E EFL+H+K++E  +L+ I KEG ++++ + KLK VV +FL +F+
Sbjct: 492 NGYLDNLPVDKVLKWESEFLSHLKTNESAILDQISKEGALSKELEGKLKDVVQSFLKSFS 551


>gi|258575733|ref|XP_002542048.1| ATP synthase F1, alpha subunit [Uncinocarpus reesii 1704]
 gi|237902314|gb|EEP76715.1| ATP synthase F1, alpha subunit [Uncinocarpus reesii 1704]
          Length = 327

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +IY GV
Sbjct: 208 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIYAGV 267

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH+K++E  +LE I+KEG++++D +A+LK V+  F  +F+
Sbjct: 268 NGLLDSIPVKKILQWEADFLAHLKANEAEVLEKIEKEGQLSKDLEAQLKDVIVAFNKSFS 327


>gi|156087883|ref|XP_001611348.1| ATP synthase F1, alpha subunit family protein [Babesia bovis]
 gi|154798602|gb|EDO07780.1| ATP synthase F1, alpha subunit family protein [Babesia bovis]
          Length = 544

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 89/117 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+REVAAFAQFGSDLDAATQ+LL RG  LTELLKQ QY PM    QV VIY GV
Sbjct: 421 MKLDLAQFREVAAFAQFGSDLDAATQKLLTRGTLLTELLKQPQYSPMKTAIQVCVIYGGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 117
           RG LD +DP  ++ FE  F+ H+ SS++ LL+ I  EG+++ +T+A+LK  V NF+A
Sbjct: 481 RGLLDSIDPKDVSKFETLFIEHLMSSQQDLLKKIDDEGQLSPETEAQLKQTVENFVA 537


>gi|15889879|ref|NP_355560.1| ATP synthase alpha chain [Agrobacterium fabrum str. C58]
 gi|335033541|ref|ZP_08526906.1| F0F1 ATP synthase subunit alpha [Agrobacterium sp. ATCC 31749]
 gi|81591311|sp|Q8UC74.1|ATPA_AGRT5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15157826|gb|AAK88345.1| ATP synthase alpha chain [Agrobacterium fabrum str. C58]
 gi|333794832|gb|EGL66164.1| F0F1 ATP synthase subunit alpha [Agrobacterium sp. ATCC 31749]
          Length = 509

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+  A++  FE+ FL++++S  + +L++I+ E  I++DT  KLK  + NF  +F+
Sbjct: 450 NGYLDKIPVAQVGKFEQGFLSYLRSEGKAILDTIRTEKAISDDTKGKLKGALDNFAKSFS 509


>gi|299471880|emb|CBN77050.1| expressed unknown protein [Ectocarpus siliculosus]
          Length = 522

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 93/122 (76%), Gaps = 2/122 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFA+FGSDLDA+TQQ LNRGVRL ELLKQ QYVP+ +EEQV +++ GV
Sbjct: 400 MKLELAQYREVAAFAKFGSDLDASTQQQLNRGVRLYELLKQDQYVPLEVEEQVVILFAGV 459

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERG-LLESIKKEG-KITEDTDAKLKTVVTNFLAN 118
           +G +D++D  K+T +EK +LAHIK+S    +LE IK    ++T+D   KL +V   F  +
Sbjct: 460 KGFIDRVDVNKVTAYEKAWLAHIKASHSSDILEGIKNANYELTDDMQQKLASVCDEFTTS 519

Query: 119 FT 120
           FT
Sbjct: 520 FT 521


>gi|115396612|ref|XP_001213945.1| ATP synthase alpha chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114193514|gb|EAU35214.1| ATP synthase alpha chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 556

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVSDMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  AKI  +E +FLAH+KS+   + E+I+KEG++++D +A+LK V+  F  +F 
Sbjct: 496 NGYLDSIPVAKILQWESDFLAHLKSNHPEIQETIEKEGQVSKDLEAQLKEVIGAFNKSFN 555


>gi|340521314|gb|EGR51549.1| ATP synthase alpha chain mitochondrial precursor [Trichoderma
           reesei QM6a]
          Length = 551

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVNEMVPLIYAGI 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   +I  +E +FLAH+K++E  LL +I KEG +++D +A+LK V  +F+ +F
Sbjct: 491 NGHLDAIPVNQILKWEADFLAHLKTNEADLLATIDKEGALSKDLEARLKDVTVSFVKSF 549


>gi|327355595|gb|EGE84452.1| ATP synthase subunit alpha [Ajellomyces dermatitidis ATCC 18188]
          Length = 551

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+KS+E  LL++I+KEG++++D +A+LK V   F   F+
Sbjct: 492 NGYLDSIPVNKILQWETDFLAHLKSNEPELLQTIEKEGQLSKDLEAQLKDVTIAFNKAFS 551


>gi|261197848|ref|XP_002625326.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis SLH14081]
 gi|239595289|gb|EEQ77870.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis SLH14081]
 gi|239607716|gb|EEQ84703.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis ER-3]
          Length = 483

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 364 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 423

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+KS+E  LL++I+KEG++++D +A+LK V   F   F+
Sbjct: 424 NGYLDSIPVNKILQWETDFLAHLKSNEPELLQTIEKEGQLSKDLEAQLKDVTIAFNKAFS 483


>gi|237836829|ref|XP_002367712.1| ATP synthase alpha chain, putative [Toxoplasma gondii ME49]
 gi|211965376|gb|EEB00572.1| ATP synthase alpha chain, putative [Toxoplasma gondii ME49]
 gi|221483857|gb|EEE22161.1| ATP synthase alpha chain, putative [Toxoplasma gondii GT1]
 gi|221505142|gb|EEE30796.1| ATP synthase alpha chain, putative [Toxoplasma gondii VEG]
          Length = 565

 Score =  144 bits (362), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 91/117 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+T+QLL RG  LTELLKQ QY PM    QV V+YCGV
Sbjct: 442 MKLELAQYREVAAFAQFGSDLDASTRQLLTRGTALTELLKQRQYSPMKNSVQVCVLYCGV 501

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 117
           +G+LD LDP +I+ FE  F+ +I ++ + +L++I+ E +++E T+AKL+  V  F+A
Sbjct: 502 KGYLDPLDPKEISRFESLFIDYINANHQDILKTIETEKELSEKTEAKLRAAVDEFVA 558


>gi|390596635|gb|EIN06036.1| hypothetical protein PUNSTDRAFT_136829 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 257

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/120 (60%), Positives = 92/120 (76%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY PMA+E QV +IY GV
Sbjct: 138 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPMAMEVQVPIIYAGV 197

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KITT+E EF +H+ S++  LLE I K G IT + + K+K VV + +++FT
Sbjct: 198 NGLLDSIPVDKITTWEAEFRSHLASAQSALLEEIAK-GNITPELEGKIKKVVEDHVSSFT 256


>gi|367044284|ref|XP_003652522.1| hypothetical protein THITE_2114103 [Thielavia terrestris NRRL 8126]
 gi|346999784|gb|AEO66186.1| hypothetical protein THITE_2114103 [Thielavia terrestris NRRL 8126]
          Length = 551

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+K++E  L+ +I KEG I+++ +A+L+ ++ NF  +F 
Sbjct: 491 NGYLDSVPVNKILQWEADFLAHLKTNEADLMATIDKEGAISKELEARLREIIQNFTKSFL 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|358400735|gb|EHK50061.1| mitochondrial F1 ATPase subunit alpha [Trichoderma atroviride IMI
           206040]
          Length = 551

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGI 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +   +I  +E +FLAH+K++E  LL +I KEG ++++ + +LK  +T+F+ +F
Sbjct: 491 NGHLDSIPVDQILKWESDFLAHLKTNESDLLATIDKEGALSKELENRLKDSITSFVKSF 549


>gi|254571387|ref|XP_002492803.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Komagataella pastoris GS115]
 gi|238032601|emb|CAY70624.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Komagataella pastoris GS115]
 gi|328353189|emb|CCA39587.1| F-type H+-transporting ATPase subunit alpha [Komagataella pastoris
           CBS 7435]
          Length = 546

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 94/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV VIY GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYAPLAAEEQVPVIYAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+EFLA++KS+E  +LE+I+ +G+++++  AKLK+   +F+A F
Sbjct: 488 NGFLDSVPLERIGQFEEEFLAYLKSNETEVLEAIRVKGQLSDELLAKLKSATESFVATF 546


>gi|212545749|ref|XP_002153028.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           marneffei ATCC 18224]
 gi|212545751|ref|XP_002153029.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           marneffei ATCC 18224]
 gi|210064548|gb|EEA18643.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           marneffei ATCC 18224]
 gi|210064549|gb|EEA18644.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           marneffei ATCC 18224]
          Length = 555

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 96/120 (80%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PM++ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMSVSEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  AKI  +E++F+A++KSS+  +L++I KEG+++++ +AKLK ++  F  +F+
Sbjct: 496 NGYLDSIPVAKIEKWEEDFIAYLKSSQADVLQTIDKEGQLSKELEAKLKDIIVGFNKSFS 555


>gi|403222866|dbj|BAM40997.1| ATP synthase subunit alpha [Theileria orientalis strain Shintoku]
          Length = 545

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+RE+ AF+QFGSDLDA+TQQLL RG  LTELLKQ QY P+++  Q+ VIY GV
Sbjct: 425 MKLDLAQFREIQAFSQFGSDLDASTQQLLTRGTLLTELLKQKQYSPLSVPLQICVIYGGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LDKLDP  +  +E+E L H+ S    LL +++KEG +T +T+++LK+ + NF+ NF 
Sbjct: 485 NGLLDKLDPKLVNRYEEELLEHLSSQHSDLLTTLEKEGVLTPETESRLKSTLENFINNFN 544


>gi|328769994|gb|EGF80037.1| hypothetical protein BATDEDRAFT_16944 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 545

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+TQ LLNRG RLTELLKQ QY P+++E  V VIY GV
Sbjct: 426 LKLFLAQYREVAAFAQFGSDLDASTQFLLNRGARLTELLKQNQYSPLSVEHMVIVIYSGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+T FE   + H++S    + E+IKKE +IT +TD K+K V+ +F   F
Sbjct: 486 NGFLDKIPVNKVTAFEAALIPHVQSVAPEIFEAIKKENQITPETDKKIKQVLGDFAKTF 544


>gi|242820468|ref|XP_002487516.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713981|gb|EED13405.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 555

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 95/120 (79%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVSEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E++F A++KS++  +L++I KEG++++D +AKL+ ++T F  +F+
Sbjct: 496 NGFLDSIPVAKIEKWEEDFTAYLKSNQSEVLQTIDKEGQLSKDLEAKLRDIITEFNKSFS 555


>gi|398355370|ref|YP_006400834.1| ATP synthase subunit alpha [Sinorhizobium fredii USDA 257]
 gi|390130696|gb|AFL54077.1| ATP synthase subunit alpha [Sinorhizobium fredii USDA 257]
          Length = 509

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   +++ FE+  L++++S  + LLE+I+KE  I++D   KLK  + +F  +F 
Sbjct: 450 NGYLDKLPVNQVSKFEQGLLSYLRSEGKDLLEAIRKEKAISDDVKGKLKAAIDSFAKSFA 509


>gi|11466576|ref|NP_066466.1| ATP synthase F1 subunit alpha [Rhodomonas salina]
 gi|10444163|gb|AAG17737.1|AF288090_13 ATP synthase F1 subunit alpha [Rhodomonas salina]
          Length = 510

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG +LTELLKQ Q+ P+ IE+QV V++ GV
Sbjct: 391 LKLELAQYREVAAFAQFGSDLDAATQHLLNRGSKLTELLKQNQFSPLTIEQQVCVLFTGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+  +I  FE EFL+ + +    +L+++K +  I+++T+ KLK  +  FL++F
Sbjct: 451 RGYLDKLEINQIGRFEVEFLSALDTKGSSILQTVKTDKVISDETETKLKDFIVEFLSSF 509


>gi|227823628|ref|YP_002827601.1| F0F1 ATP synthase subunit alpha [Sinorhizobium fredii NGR234]
 gi|254808109|sp|C3M9S3.1|ATPA_RHISN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|227342630|gb|ACP26848.1| ATP synthase F1, alpha subunit [Sinorhizobium fredii NGR234]
          Length = 509

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   ++  FE+  L++++S  + +L++I+ E  I++DT AKLKT + +F  +F
Sbjct: 450 NGYLDKLPVNQVGKFEQGLLSYLRSEGKAVLDTIRTEKAISDDTKAKLKTAIDSFSKSF 508


>gi|400602926|gb|EJP70524.1| ATP synthase alpha chain [Beauveria bassiana ARSEF 2860]
          Length = 549

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q+L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 429 LKLYLAQYREVAAFAQFGSDLDAATKQVLARGERLTELLKQKQYSPMAVNEMVPLIFAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  +E +FLAH+K++E  LL SI KEG ++++ +AKLK V  +F+ +F
Sbjct: 489 NGYLDNVPVNRVLEWEADFLAHLKTNESELLASIDKEGALSKELEAKLKDVTQSFIKSF 547


>gi|401405759|ref|XP_003882329.1| hypothetical protein NCLIV_020840 [Neospora caninum Liverpool]
 gi|325116744|emb|CBZ52297.1| hypothetical protein NCLIV_020840 [Neospora caninum Liverpool]
          Length = 568

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 90/117 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+T+QLL RG  LTELLKQ QY PM    QV V+YCGV
Sbjct: 445 MKLELAQYREVAAFAQFGSDLDASTRQLLTRGTALTELLKQRQYSPMKNSVQVCVLYCGV 504

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 117
           +G+LD LDP +I+ FE  F+  I ++ + +L++I+ E +++E T+AKL+  +  F+A
Sbjct: 505 KGYLDPLDPKEISRFESLFIEFINANHQDILKAIETEKELSEKTEAKLRAAIDEFVA 561


>gi|114571343|ref|YP_758023.1| ATP synthase F0F1 subunit alpha [Maricaulis maris MCS10]
 gi|122315069|sp|Q0AKV8.1|ATPA_MARMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114341805|gb|ABI67085.1| ATP synthase F1 subcomplex alpha subunit [Maricaulis maris MCS10]
          Length = 510

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MK ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+++EEQV VIY G 
Sbjct: 391 MKGELAQYREMAAFAQFGSDLDAATQKLLNRGQRLTELLKQPQFSPLSMEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL  + +  +E + L H+      LL SI+ E K+T+D++++LK  +  F  +F
Sbjct: 451 RGYLDKLPTSDVQRYEADLLRHLHGEHAALLASIRTEKKLTDDSESQLKAALAKFTEHF 509


>gi|226510502|ref|NP_001141021.1| uncharacterized protein LOC100273100 [Zea mays]
 gi|194702226|gb|ACF85197.1| unknown [Zea mays]
          Length = 552

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 91/121 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY P  +   V +I+ GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQTQYNPYPVNHMVPLIFAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   K+  +E +F+AH+K++E  LL +I KEG I++DT+AKL+ V  +F+ +F 
Sbjct: 492 NGYLDSVPVNKVLQWEADFIAHLKTNESELLATIDKEGAISKDTEAKLRDVTQSFVKSFL 551

Query: 121 G 121
           G
Sbjct: 552 G 552


>gi|402077122|gb|EJT72471.1| ATP synthase subunit alpha [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 554

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 92/121 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 434 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQRQYSPMAVNEMVPLIFAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD +   +I  +E +FLA++K++E  LL +I KEG ++++ +A+L+  +T F  +F 
Sbjct: 494 RGLLDSVPVPRIQEWEADFLAYLKTNESDLLATIDKEGALSKELEARLQDAITTFTKSFL 553

Query: 121 G 121
           G
Sbjct: 554 G 554


>gi|390450619|ref|ZP_10236207.1| F0F1 ATP synthase subunit alpha [Nitratireductor aquibiodomus RA22]
 gi|389662166|gb|EIM73745.1| F0F1 ATP synthase subunit alpha [Nitratireductor aquibiodomus RA22]
          Length = 509

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +T FE+  L+H+++  + +LE+I+KE  +++D   KLK  +  F  NF 
Sbjct: 450 NGYLDKLPLADVTRFEQGLLSHMRADGKDVLEAIRKEKALSDDLREKLKAQIDAFAKNFA 509


>gi|395823146|ref|XP_003784855.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Otolemur
           garnettii]
          Length = 288

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/119 (62%), Positives = 87/119 (73%), Gaps = 14/119 (11%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA           L   L      PMAIEEQVAVIY GV
Sbjct: 182 MKLELAQYREVAAFAQFGSDLDATF---------LGHTLS-----PMAIEEQVAVIYAGV 227

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL+P+KIT FE  FL+H+ S  + LL +I+ +GKI+E++DAKLK +VTNFLA F
Sbjct: 228 RGYLDKLEPSKITKFENAFLSHVISQHQALLGTIRADGKISEESDAKLKEIVTNFLAGF 286


>gi|119484592|ref|XP_001262075.1| mitochondrial F1 ATPase subunit alpha, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410231|gb|EAW20178.1| mitochondrial F1 ATPase subunit alpha, putative [Neosartorya
           fischeri NRRL 181]
          Length = 556

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVSEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI T+E +FLA +KS++  LLE+I KEG+++++ +A+L+ V+ NF  +F 
Sbjct: 496 NGYLDGIPVNKILTWESDFLASVKSNQPELLETIDKEGQVSKELEAQLREVIENFNKSFN 555


>gi|70983614|ref|XP_747334.1| mitochondrial F1 ATPase subunit alpha [Aspergillus fumigatus Af293]
 gi|66844960|gb|EAL85296.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           fumigatus Af293]
 gi|159123660|gb|EDP48779.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           fumigatus A1163]
          Length = 556

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVSEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI T+E +FLA +KS++  +LE+I KEG+++++ +A+L+ V+ NF  +F 
Sbjct: 496 NGYLDGIPVNKILTWESDFLASVKSNQPEILETIDKEGQVSKELEAQLREVIVNFNKSFN 555


>gi|417858158|ref|ZP_12503215.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens F2]
 gi|338824162|gb|EGP58129.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens F2]
          Length = 509

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+  A++  FE+ FL++++S  + +L++I+ E  I++DT  KLK  +  F  +F+
Sbjct: 450 NGYLDKIPVAQVGKFEQGFLSYLRSEGKAILDTIRTEKAISDDTKGKLKGALDTFAKSFS 509


>gi|150398121|ref|YP_001328588.1| F0F1 ATP synthase subunit alpha [Sinorhizobium medicae WSM419]
 gi|166201680|sp|A6UDM3.1|ATPA_SINMW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150029636|gb|ABR61753.1| ATP synthase F1, alpha subunit [Sinorhizobium medicae WSM419]
          Length = 509

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LDKL  A +  FE+  L++++S  + +L++I+ E  I++DT AKLK  + +F  +F 
Sbjct: 450 NGFLDKLPVADVGKFEQGLLSYMRSEGKAVLDTIRTEKAISDDTKAKLKAAIDSFAKSFA 509


>gi|241206627|ref|YP_002977723.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860517|gb|ACS58184.1| ATP synthase F1, alpha subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 509

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  FE+ FL++++S    +L++I+ E  I++DT  KL   + +F  +F+
Sbjct: 450 NGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISDDTKGKLNAALDSFAKSFS 509


>gi|384489780|gb|EIE81002.1| ATP synthase subunit alpha [Rhizopus delemar RA 99-880]
          Length = 547

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL LAQYREVAAFAQFGSDLDA+TQ LLNRG RLTELLKQ QY P++I+ QV +I+ GV
Sbjct: 428 MKLFLAQYREVAAFAQFGSDLDASTQFLLNRGARLTELLKQPQYTPLSIQAQVPIIFAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+T +EK+F++H+ S    +LE I+ +G I+++ +AKL+ +  N    F
Sbjct: 488 NGFLDKVPVNKVTEWEKDFISHVHSEHNDVLEEIRSKGVISKELEAKLRDICENHTKGF 546


>gi|384488598|gb|EIE80778.1| ATP synthase subunit alpha [Rhizopus delemar RA 99-880]
          Length = 516

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL LAQYREVAAFAQFGSDLDA+TQ LLNRG RLTELLKQ QY P++I+ QV +I+ GV
Sbjct: 397 MKLFLAQYREVAAFAQFGSDLDASTQFLLNRGARLTELLKQPQYTPLSIQAQVPIIFAGV 456

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+T +EK+F++H+ S    +LE I+ +G I+++ +AKL+ +  N    F
Sbjct: 457 NGFLDKVPVNKVTEWEKDFISHVHSEHNDVLEEIRSKGVISKELEAKLRDICENHTKGF 515


>gi|407975149|ref|ZP_11156055.1| F0F1 ATP synthase subunit alpha [Nitratireductor indicus C115]
 gi|407429234|gb|EKF41912.1| F0F1 ATP synthase subunit alpha [Nitratireductor indicus C115]
          Length = 509

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL    +T FE+  L+H+++  + +LE I+KE  +++D   KLK  +  F  NF 
Sbjct: 450 NGYLDKLSLKDVTRFEQGLLSHLRADGKAVLEGIRKEKALSDDLREKLKAQIDAFAKNFV 509


>gi|315046356|ref|XP_003172553.1| ATP synthase subunit alpha [Arthroderma gypseum CBS 118893]
 gi|311342939|gb|EFR02142.1| ATP synthase subunit alpha [Arthroderma gypseum CBS 118893]
          Length = 596

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 477 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 536

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L +I+KEG+I++D +A+++  +  F  +F+
Sbjct: 537 NGLLDNIPVEKILPWEADFLAHLRSNEPEILATIEKEGQISKDLEAQIRDCIVAFNKSFS 596


>gi|209551226|ref|YP_002283143.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|424916503|ref|ZP_18339867.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM597]
 gi|226739930|sp|B5ZSN9.1|ATPA_RHILW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|209536982|gb|ACI56917.1| ATP synthase F1, alpha subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|392852679|gb|EJB05200.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM597]
          Length = 509

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  FE+ FL++++S    +L++I+ E  I++DT  KL   + +F  +F+
Sbjct: 450 NGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISDDTKGKLTAALDSFAKSFS 509


>gi|259486849|tpe|CBF85040.1| TPA: ATP synthase alpha chain, mitochondrial precursor (Broad)
           [Aspergillus nidulans FGSC A4]
          Length = 556

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGQRLTELLKQKQYSPMAVSDMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  AKI  +E +FLA++KS+   + E+I+KEG+++++ +AKLK ++ +F  +F 
Sbjct: 496 NGYLDNIPVAKILQWESDFLAYLKSNHPEVQETIEKEGQVSKELEAKLKDIIPSFNKSFN 555


>gi|420243929|ref|ZP_14747787.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF080]
 gi|398057126|gb|EJL49101.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF080]
          Length = 509

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 94/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+  A +  FE+ FL++++S  + LL++I+ E ++++DT AKLK  + ++  +F
Sbjct: 450 NGYLDKIAVADVGKFEQGFLSYLRSEGKALLDTIRTEKQLSDDTRAKLKAALDSYAKSF 508


>gi|67522132|ref|XP_659127.1| ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
 gi|40744623|gb|EAA63779.1| ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
          Length = 573

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 453 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGQRLTELLKQKQYSPMAVSDMVPLIFAGV 512

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  AKI  +E +FLA++KS+   + E+I+KEG+++++ +AKLK ++ +F  +F 
Sbjct: 513 NGYLDNIPVAKILQWESDFLAYLKSNHPEVQETIEKEGQVSKELEAKLKDIIPSFNKSFN 572


>gi|378827729|ref|YP_005190461.1| ATP synthase F1 subunit alpha [Sinorhizobium fredii HH103]
 gi|365180781|emb|CCE97636.1| ATP synthase F1, alpha subunit [Sinorhizobium fredii HH103]
          Length = 509

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  L++++S  + LLE+I+KE  I++D   KLK  + +F  +F 
Sbjct: 450 NGYLDKLPVNQVGKFEQGLLSYLRSEGKELLEAIRKEKAISDDIKGKLKAAIDSFAKSFA 509


>gi|424886681|ref|ZP_18310289.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|424897324|ref|ZP_18320898.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM2297]
 gi|393176032|gb|EJC76074.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393181551|gb|EJC81590.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. trifolii WSM2297]
          Length = 509

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  FE+ FL++++S    +L++I+ E  I++DT  KL   + +F  +F+
Sbjct: 450 NGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISDDTRGKLTAALDSFAKSFS 509


>gi|116180984|ref|XP_001220341.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88185417|gb|EAQ92885.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 128

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 91/121 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY P A+ E V +I+ GV
Sbjct: 8   VKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPYAVNEMVPIIFAGV 67

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+K++E  +L +I KEG I+++ +A+LK +V  F+ +F 
Sbjct: 68  NGYLDSVPVDKILQWEADFLAHLKTNEADVLATIDKEGAISKELEARLKEIVPAFIKSFL 127

Query: 121 G 121
           G
Sbjct: 128 G 128


>gi|116254141|ref|YP_769979.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv. viciae
           3841]
 gi|424872654|ref|ZP_18296316.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. viciae WSM1455]
 gi|118573486|sp|Q1MAZ0.1|ATPA_RHIL3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115258789|emb|CAK09895.1| putative ATP synthase alpha chain [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|393168355|gb|EJC68402.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. viciae WSM1455]
          Length = 509

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  FE+ FL++++S    +L++I+ E  I++DT  KL   + +F  +F+
Sbjct: 450 NGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISDDTRGKLTAALDSFAKSFS 509


>gi|366993807|ref|XP_003676668.1| hypothetical protein NCAS_0E02390 [Naumovozyma castellii CBS 4309]
 gi|342302535|emb|CCC70309.1| hypothetical protein NCAS_0E02390 [Naumovozyma castellii CBS 4309]
          Length = 535

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 417 LKLFLAQYREVAAFAQFGSDLDASTKQTLTRGERLTQLLKQNQYSPLSAEEQVPLIYAGV 476

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FLA +KS+   +L+ I+++G++T+D  A LK+   +F+A F
Sbjct: 477 NGHLDNIELSRIGEFESSFLAFLKSNHESILKDIREKGELTKDLMASLKSATESFVATF 535


>gi|15966789|ref|NP_387142.1| F0F1 ATP synthase subunit alpha [Sinorhizobium meliloti 1021]
 gi|334317791|ref|YP_004550410.1| ATP synthase subunit alpha [Sinorhizobium meliloti AK83]
 gi|384530915|ref|YP_005715003.1| ATP synthase subunit alpha [Sinorhizobium meliloti BL225C]
 gi|384537628|ref|YP_005721713.1| probabable ATP synthase subunit alpha [Sinorhizobium meliloti SM11]
 gi|407722101|ref|YP_006841763.1| ATP synthase subunit alpha [Sinorhizobium meliloti Rm41]
 gi|418401818|ref|ZP_12975341.1| F0F1 ATP synthase subunit alpha [Sinorhizobium meliloti CCNWSX0020]
 gi|433614863|ref|YP_007191661.1| proton translocating ATP synthase, F1 alpha subunit [Sinorhizobium
           meliloti GR4]
 gi|81633813|sp|Q92LK6.1|ATPA_RHIME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15076061|emb|CAC47615.1| Probable ATP synthase subunit alpha [Sinorhizobium meliloti 1021]
 gi|333813091|gb|AEG05760.1| ATP synthase subunit alpha [Sinorhizobium meliloti BL225C]
 gi|334096785|gb|AEG54796.1| ATP synthase subunit alpha [Sinorhizobium meliloti AK83]
 gi|336034520|gb|AEH80452.1| probabable ATP synthase subunit alpha [Sinorhizobium meliloti SM11]
 gi|359504230|gb|EHK76769.1| F0F1 ATP synthase subunit alpha [Sinorhizobium meliloti CCNWSX0020]
 gi|407320333|emb|CCM68937.1| ATP synthase subunit alpha [Sinorhizobium meliloti Rm41]
 gi|429553053|gb|AGA08062.1| proton translocating ATP synthase, F1 alpha subunit [Sinorhizobium
           meliloti GR4]
          Length = 509

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  + +  FE   L++++S  + +L++I+ E  I++DT AKLK  + +F  +F 
Sbjct: 450 NGYLDKLPVSDVGKFEHGLLSYLRSEGKAVLDTIRTEKAISDDTKAKLKGAIDSFAKSFA 509


>gi|296805997|ref|XP_002843818.1| ATP synthase alpha subunit [Arthroderma otae CBS 113480]
 gi|238845120|gb|EEQ34782.1| ATP synthase alpha subunit [Arthroderma otae CBS 113480]
          Length = 555

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L  I+KEG+I++D +A+++  +  F  +F+
Sbjct: 496 NGLLDNIPVEKILAWEADFLAHLRSNEPEILAKIEKEGQISKDLEAQIRDCIVAFNKSFS 555


>gi|449297213|gb|EMC93231.1| hypothetical protein BAUCODRAFT_36903 [Baudoinia compniacensis UAMH
           10762]
          Length = 553

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 434 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYQPMAVNEMVPLIFAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FL H++S+E GL+E I+KEG +++D + KL+  + +F  +F+
Sbjct: 494 NGLLDSVPVNKILQWEADFLNHLRSNESGLIEQIEKEGALSKDLENKLRETIQSFTKSFS 553


>gi|145253056|ref|XP_001398041.1| ATP synthase subunit alpha [Aspergillus niger CBS 513.88]
 gi|134083599|emb|CAL00514.1| unnamed protein product [Aspergillus niger]
 gi|350633117|gb|EHA21483.1| hypothetical protein ASPNIDRAFT_204982 [Aspergillus niger ATCC
           1015]
          Length = 556

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVSDMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E +FLAH+KS+   + E+I+KEG+++++ +A+LK ++  F  +F 
Sbjct: 496 NGFLDSIPVAKILQWESDFLAHLKSNHPEIQETIEKEGQVSKELEAQLKEIIPTFNKSFN 555


>gi|241948767|ref|XP_002417106.1| ATP alpha synthase chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223640444|emb|CAX44696.1| ATP alpha synthase chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 546

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYNPLAAEEQVPLIFAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+ FL H+KS+E G+L++IK +G++++D   KL+ V   F+A+F
Sbjct: 488 NGFLDNVPLDRIGEFEEAFLGHLKSNEAGILDAIKTKGELSKDELEKLRKVTEEFVASF 546


>gi|45200825|ref|NP_986395.1| AGL272Cp [Ashbya gossypii ATCC 10895]
 gi|44985523|gb|AAS54219.1| AGL272Cp [Ashbya gossypii ATCC 10895]
 gi|374109640|gb|AEY98545.1| FAGL272Cp [Ashbya gossypii FDAG1]
          Length = 547

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 94/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LL Q QY P+A EEQV +IY GV
Sbjct: 429 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLTQSQYSPLAAEEQVPLIYAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ ++I  FEKEFLA++K+S   ++ +I+++G++++D  AKLK+   +F+A F
Sbjct: 489 NGYLDNIELSRIGEFEKEFLAYLKASHEEIVSAIREKGELSKDLLAKLKSATESFVATF 547


>gi|323449102|gb|EGB04993.1| hypothetical protein AURANDRAFT_59430 [Aureococcus anophagefferens]
          Length = 498

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 91/121 (75%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYREVAAFA+FGSDLD ATQQ LNRGVRL ELLKQGQY P+  EEQV +++ GV
Sbjct: 377 MKLDLAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQPLECEEQVIILFAGV 436

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITED-TDAKLKTVVTNFLANF 119
           RG++D +D + I  +EK +L H+K+S   ++++I  EG +  D T+AKL  V  +F A F
Sbjct: 437 RGYIDAVDVSAIQDYEKAWLDHVKTSHPDIMKTIVGEGFVISDATEAKLGKVCEDFTAAF 496

Query: 120 T 120
           +
Sbjct: 497 S 497


>gi|384501788|gb|EIE92279.1| ATP synthase subunit alpha [Rhizopus delemar RA 99-880]
          Length = 547

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL LAQYREVAAFAQFGSDLDA+TQ LLNRG RLTELLKQ QY P++I+ QV +I+ GV
Sbjct: 428 MKLFLAQYREVAAFAQFGSDLDASTQFLLNRGARLTELLKQPQYTPLSIQAQVPIIFAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+T +EK+F++H+ S    +LE I+ +G I+++ +AKL+ +  N    F
Sbjct: 488 NGFLDKVPVNKVTEWEKDFISHVHSQHTDVLEEIRSKGVISKELEAKLRDICENHTKAF 546


>gi|325293993|ref|YP_004279857.1| ATP synthase F1 subunit alpha [Agrobacterium sp. H13-3]
 gi|418409298|ref|ZP_12982611.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens 5A]
 gi|325061846|gb|ADY65537.1| ATP synthase F1, alpha subunit [Agrobacterium sp. H13-3]
 gi|358004615|gb|EHJ96943.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens 5A]
          Length = 509

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+  A++  FE+  L++++S  + +L++I+ E  I++DT +KLK  + +F  +F+
Sbjct: 450 NGYLDKIPVAQVGKFEQGLLSYLRSEGKAILDTIRTEKAISDDTKSKLKGALDSFAKSFS 509


>gi|50294700|ref|XP_449761.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529075|emb|CAG62739.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 425 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLAAEEQVPLIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +D  +I  FE  FLA++KS+   +L  I+ +G++T+D  A LK+   +F+A F
Sbjct: 485 NGYLDNIDLGRIAEFESSFLAYLKSNHENILNDIRDKGELTKDLLATLKSATESFVATF 543


>gi|384483854|gb|EIE76034.1| ATP synthase subunit alpha [Rhizopus delemar RA 99-880]
          Length = 537

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL LAQYREVAAFAQFGSDLDA+TQ LLNRG RLTELLKQ QY P++I+ QV +I+ GV
Sbjct: 418 MKLFLAQYREVAAFAQFGSDLDASTQFLLNRGARLTELLKQPQYTPLSIQAQVPIIFAGV 477

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+T +EK+F++H+ S    +LE I+ +G I+++ +AKL+ +  N    F
Sbjct: 478 NGFLDKVPVNKVTEWEKDFISHVHSQHTDVLEEIRSKGVISKELEAKLRDICENHTKAF 536


>gi|358372656|dbj|GAA89258.1| ATP synthase alpha chain, mitochondrial precursor [Aspergillus
           kawachii IFO 4308]
          Length = 556

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMAVSDMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  AKI  +E +FLAH+KS+   + E+I+KEG+++++ +A+LK ++  F  +F 
Sbjct: 496 NGFLDAIPVAKILQWESDFLAHLKSNHPEIQETIEKEGQVSKELEAQLKEIIPTFNKSFN 555


>gi|303274717|ref|XP_003056674.1| ATP synthase [Micromonas pusilla CCMP1545]
 gi|226461026|gb|EEH58319.1| ATP synthase [Micromonas pusilla CCMP1545]
          Length = 562

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 88/119 (73%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQGQ+VPM IE QV VIY   
Sbjct: 441 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGSRLTEVLKQGQFVPMPIEVQVVVIYAAT 500

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D   I  FE+  L  + +S   LL++I+ E  I++ TDAKLK + + +   F
Sbjct: 501 KGYLDKVDIKNIGAFEEGLLKEVPTS---LLDTIRNEKVISDATDAKLKELCSKYTEGF 556


>gi|418297786|ref|ZP_12909626.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355537156|gb|EHH06416.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 509

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 94/120 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+  A++  FE+  L++++S  + +L++I+ E  I++DT +KLK  + +F  +F+
Sbjct: 450 NGYLDKIPVAQVGKFEQGLLSYLRSEGKAILDTIRTEKAISDDTKSKLKGALDSFAKSFS 509


>gi|327305237|ref|XP_003237310.1| mitochondrial ATP synthase alpha subunit [Trichophyton rubrum CBS
           118892]
 gi|326460308|gb|EGD85761.1| mitochondrial ATP synthase alpha subunit [Trichophyton rubrum CBS
           118892]
          Length = 555

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L  I KEG+I++D +A+++  +  F  +F+
Sbjct: 496 NGLLDNIPVEKILAWEADFLAHLRSNEPEILAKIDKEGQISKDLEAQIRDCIVAFNKSFS 555


>gi|326472094|gb|EGD96103.1| ATPase alpha subunit [Trichophyton tonsurans CBS 112818]
 gi|326477041|gb|EGE01051.1| ATPase alpha subunit [Trichophyton equinum CBS 127.97]
          Length = 555

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 436 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 495

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L  I KEG+I++D +A+++  +  F  +F+
Sbjct: 496 NGLLDNIPVEKILAWEADFLAHLRSNEPEILAKIDKEGQISKDLEAQIRDCIVAFNKSFS 555


>gi|238879075|gb|EEQ42713.1| ATP synthase alpha chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 547

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 429 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYNPLAAEEQVPLIFAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+ FL H+KS+E G+L++IK +G++++D   KL+ V   F+A+F
Sbjct: 489 NGFLDNVALDRIGEFEEAFLGHLKSNETGILDAIKTKGELSKDELEKLRKVTEEFVASF 547


>gi|323137980|ref|ZP_08073054.1| ATP synthase F1, alpha subunit [Methylocystis sp. ATCC 49242]
 gi|322396699|gb|EFX99226.1| ATP synthase F1, alpha subunit [Methylocystis sp. ATCC 49242]
          Length = 510

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+ +EEQ  VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDAVTQRLLNRGARLTELLKQPQFSPLKMEEQTCVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   ++  FE   LA ++SS   +LESI+    +++DT AKLK+VV +F  +F
Sbjct: 451 NGYLDPLPVNRVRAFEDGLLALLRSSHNDILESIRTSKDLSDDTAAKLKSVVESFAKSF 509


>gi|302506935|ref|XP_003015424.1| hypothetical protein ARB_06550 [Arthroderma benhamiae CBS 112371]
 gi|291178996|gb|EFE34784.1| hypothetical protein ARB_06550 [Arthroderma benhamiae CBS 112371]
          Length = 569

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 450 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 509

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L  I KEG+I++D +A+++  +  F  +F+
Sbjct: 510 NGLLDNIPVEKILAWEADFLAHLRSNEPEILAKIDKEGQISKDLEAQIRDCIVAFNKSFS 569


>gi|213406001|ref|XP_002173772.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
 gi|212001819|gb|EEB07479.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
          Length = 505

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVA+FAQFGSDLD  T+  L+RG+RLTELLKQ QY P+A+EEQV +IYCGV
Sbjct: 387 IKLFLAQYREVASFAQFGSDLDPGTRATLDRGLRLTELLKQPQYSPLAVEEQVPLIYCGV 446

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD++   ++T FE++F+  +++S   +L++I+ EG + E T+ +LK+ +  FL +F
Sbjct: 447 NGYLDRIPVERVTEFEQKFIPFLRTSAPAVLDAIRNEGVLNEATENELKSAIKEFLDSF 505


>gi|452001762|gb|EMD94221.1| hypothetical protein COCHEDRAFT_1093083 [Cochliobolus
           heterostrophus C5]
          Length = 577

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 457 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIYAGI 516

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +  +KI  +E +FLAH++S+E  +L  I +EG ++++ +AKLK V  +F  +F
Sbjct: 517 NGLLDNVPTSKILQWEADFLAHLRSNESDMLAQIDREGALSKELEAKLKEVAQSFTKSF 575


>gi|302659541|ref|XP_003021459.1| hypothetical protein TRV_04432 [Trichophyton verrucosum HKI 0517]
 gi|291185360|gb|EFE40841.1| hypothetical protein TRV_04432 [Trichophyton verrucosum HKI 0517]
          Length = 497

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG+RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 378 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQPMAVNEMVPLIFAGV 437

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI  +E +FLAH++S+E  +L  I KEG+I++D +A+++  +  F  +F+
Sbjct: 438 NGLLDNIPVEKILAWEADFLAHLRSNEPEILAKIDKEGQISKDLEAQIRDCIVAFNKSFS 497


>gi|408786318|ref|ZP_11198055.1| F0F1 ATP synthase subunit alpha [Rhizobium lupini HPC(L)]
 gi|424911358|ref|ZP_18334735.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|392847389|gb|EJA99911.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|408487690|gb|EKJ96007.1| F0F1 ATP synthase subunit alpha [Rhizobium lupini HPC(L)]
          Length = 509

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 93/120 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+  A++  FE+  L++++S  + +L++I+ E  I++DT  KLK  + +F  +F+
Sbjct: 450 NGYLDKVPVAQVGKFEQGLLSYLRSEGKAILDTIRTEKAISDDTKGKLKGALDSFAKSFS 509


>gi|85001187|ref|XP_955312.1| ATP synthase alpha chain heart isoform, mitochondrial precursor
           [Theileria annulata strain Ankara]
 gi|65303458|emb|CAI75836.1| ATP synthase alpha chain heart isoform, mitochondrial precursor,
           putative [Theileria annulata]
          Length = 545

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+RE+ AF+QFGSDLDA+TQQLL RG  LTELLKQ QY P+++  Q+ VIY GV
Sbjct: 424 MKLDLAQFREIQAFSQFGSDLDASTQQLLTRGTLLTELLKQKQYAPLSVPLQICVIYGGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LDKLDP  +  +E++ L H+ S    LL +++KEG ++ +T+AKLK+ + +F+ NF 
Sbjct: 484 NGLLDKLDPKLVGKYEEQLLEHLTSQHSDLLSTLEKEGVLSPETEAKLKSTLEHFVDNFN 543


>gi|145932443|ref|YP_001165355.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
 gi|110169641|gb|ABG54106.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
 gi|188038005|gb|ACD46623.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
          Length = 509

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E+Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVEDQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI  FE  +L  IK++   +LE I  + +I+++ D KL T+ T+F  NF
Sbjct: 448 RGFLDKIAVDKIAIFETNWLNFIKNNHSEILEEILTKKEISKELDKKLNTLSTDFTNNF 506


>gi|68487802|ref|XP_712242.1| hypothetical protein CaO19.6854 [Candida albicans SC5314]
 gi|46433615|gb|EAK93049.1| hypothetical protein CaO19.6854 [Candida albicans SC5314]
          Length = 447

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYNPLAAEEQVPLIFAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+ FL H+KS+E G+L++IK +G++++D   KL+ V   F+A+F
Sbjct: 389 NGFLDNVALDRIGEFEEAFLGHLKSNETGILDAIKTKGELSKDELEKLRKVTEEFVASF 447


>gi|404320582|ref|ZP_10968515.1| F0F1 ATP synthase subunit alpha [Ochrobactrum anthropi CTS-325]
          Length = 509

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +L+ I+KE  IT+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLDGIRKEKAITDDLKAKLKAAIDAFAKSFA 509


>gi|145932350|ref|YP_001165398.1| ATP synthase F0 subunit 1 [Phytophthora sojae]
 gi|110169593|gb|ABG54059.1| ATP synthase F0 subunit 1 [Phytophthora sojae]
          Length = 509

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E+Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVEDQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI+ FE  +L  IK++   +LE I  + +I+++ D KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKISIFETNWLNFIKNNHSDILEEILTKKEISKELDKKLNTLAVDFTNNF 506


>gi|367019566|ref|XP_003659068.1| hypothetical protein MYCTH_2088086 [Myceliophthora thermophila ATCC
           42464]
 gi|347006335|gb|AEO53823.1| hypothetical protein MYCTH_2088086 [Myceliophthora thermophila ATCC
           42464]
          Length = 551

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 91/121 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY P A+ E V VI+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPYAVNEMVPVIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLAH+K++E  L+ +I+KEG I+++ + KL+ ++  F+ +F 
Sbjct: 491 NGYLDSVPVNKIQQWETDFLAHLKTNEAELMATIEKEGAISQELEKKLREIIPAFVKSFL 550

Query: 121 G 121
           G
Sbjct: 551 G 551


>gi|86747393|ref|YP_483889.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris HaA2]
 gi|119367961|sp|Q2J3I2.1|ATPA_RHOP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86570421|gb|ABD04978.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris HaA2]
          Length = 510

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  AK+  FE   L+ ++  E G+L++I+    +++DT AKLK VV ++   F
Sbjct: 451 NGYLDALPVAKVRAFEDGLLSLLRGKEVGILDAIRTSRDLSDDTAAKLKAVVESYAKTF 509


>gi|163761387|ref|ZP_02168461.1| F0F1 ATP synthase subunit alpha [Hoeflea phototrophica DFL-43]
 gi|162281382|gb|EDQ31679.1| F0F1 ATP synthase subunit alpha [Hoeflea phototrophica DFL-43]
          Length = 509

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQAQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  + +  FE+  L H++S    +LE+I+ E  I++D  +KLK  +  F   F 
Sbjct: 450 NGYLDKLAVSDVGRFEQGLLGHMRSEGSDVLEAIRTEKAISDDVKSKLKDTIDTFAKTFA 509


>gi|340897397|gb|EGS16987.1| hypothetical protein CTHT_0073120 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 552

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q LNRG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   KI  +E +FL H+K++   +  +I KEG I+++T+AKL+ V+ +F  +F
Sbjct: 491 NGYLDAVPVNKILQWEADFLTHLKTNAPEIQAAIDKEGAISKETEAKLREVIESFTKSF 549


>gi|62290666|ref|YP_222459.1| ATP synthase F0F1 subunit alpha [Brucella abortus bv. 1 str. 9-941]
 gi|82700581|ref|YP_415155.1| F0F1 ATP synthase subunit alpha [Brucella melitensis biovar Abortus
           2308]
 gi|189024878|ref|YP_001935646.1| F0F1 ATP synthase subunit alpha [Brucella abortus S19]
 gi|237816167|ref|ZP_04595162.1| ATP synthase F1, alpha subunit [Brucella abortus str. 2308 A]
 gi|260547098|ref|ZP_05822836.1| ATP synthase subunit alpha [Brucella abortus NCTC 8038]
 gi|260755489|ref|ZP_05867837.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 6 str.
           870]
 gi|260758712|ref|ZP_05871060.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 4 str.
           292]
 gi|260762546|ref|ZP_05874883.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884510|ref|ZP_05896124.1| ATP synthase subunit alpha [Brucella abortus bv. 9 str. C68]
 gi|297249058|ref|ZP_06932766.1| ATP synthase F1, alpha subunit [Brucella abortus bv. 5 str. B3196]
 gi|376272480|ref|YP_005151058.1| ATP synthase F1 subunit alpha [Brucella abortus A13334]
 gi|423169388|ref|ZP_17156089.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI435a]
 gi|423172462|ref|ZP_17159135.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI474]
 gi|423175596|ref|ZP_17162264.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI486]
 gi|423178845|ref|ZP_17165488.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI488]
 gi|423181975|ref|ZP_17168614.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI010]
 gi|423185023|ref|ZP_17171658.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI016]
 gi|423188176|ref|ZP_17174788.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI021]
 gi|423191317|ref|ZP_17177924.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI259]
 gi|75496277|sp|Q57B86.1|ATPA_BRUAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115312238|sp|Q2YLI5.1|ATPA_BRUA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739850|sp|B2S7M5.1|ATPA_BRUA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|62196798|gb|AAX75098.1| AtpA, ATP synthase F1, alpha subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82616682|emb|CAJ11765.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region:H+-transporting two-sector ATPase, alpha subunit,
           C-ter [Brucella melitensis biovar Abortus 2308]
 gi|189020450|gb|ACD73172.1| ATP synthase subunit A [Brucella abortus S19]
 gi|237788629|gb|EEP62842.1| ATP synthase F1, alpha subunit [Brucella abortus str. 2308 A]
 gi|260095463|gb|EEW79341.1| ATP synthase subunit alpha [Brucella abortus NCTC 8038]
 gi|260669030|gb|EEX55970.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 4 str.
           292]
 gi|260672972|gb|EEX59793.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675597|gb|EEX62418.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 6 str.
           870]
 gi|260874038|gb|EEX81107.1| ATP synthase subunit alpha [Brucella abortus bv. 9 str. C68]
 gi|297174191|gb|EFH33548.1| ATP synthase F1, alpha subunit [Brucella abortus bv. 5 str. B3196]
 gi|363400086|gb|AEW17056.1| ATP synthase F1, alpha subunit [Brucella abortus A13334]
 gi|374535225|gb|EHR06751.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI474]
 gi|374535419|gb|EHR06943.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI486]
 gi|374535574|gb|EHR07096.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI435a]
 gi|374544507|gb|EHR15980.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI488]
 gi|374544897|gb|EHR16362.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI010]
 gi|374545000|gb|EHR16464.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI016]
 gi|374553022|gb|EHR24443.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI259]
 gi|374553472|gb|EHR24890.1| ATP synthase subunit alpha [Brucella abortus bv. 1 str. NI021]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFV 509


>gi|359788693|ref|ZP_09291664.1| F0F1 ATP synthase subunit alpha [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359255485|gb|EHK58395.1| F0F1 ATP synthase subunit alpha [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LAH++S  + +L+ I+KE  +++D  A+LK+ +  +  NF 
Sbjct: 450 NGYLDKLALNQVGKFEQGLLAHMRSEGKEVLDGIRKEKALSDDLRAQLKSHIDAYAKNFA 509


>gi|430814528|emb|CCJ28256.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 326

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLD +T+  L+RG RLTELLKQGQY PM +EEQV +IY GV
Sbjct: 207 LKLFLAQYREVAAFAQFGSDLDTSTKLTLSRGERLTELLKQGQYSPMPVEEQVPLIYAGV 266

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDKL   KI  FE+ FL H + +   LL +IKKE  ++++T+ K++T +  FL  F
Sbjct: 267 NGLLDKLPVEKIGAFEQAFLIHFRQNFSQLLATIKKEASLSKETEEKIRTAIQEFLKTF 325


>gi|346322413|gb|EGX92012.1| ATP synthase alpha chain [Cordyceps militaris CM01]
          Length = 581

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q+L RG RLTELLKQ QY PMA+ E V +I+ GV
Sbjct: 461 LKLYLAQYREVAAFAQFGSDLDAATKQVLARGERLTELLKQKQYSPMAVNEMVPLIFAGV 520

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   +I  +E ++L H+K++E  +L +I KEG I+++ +AKLK V  +F+ +F
Sbjct: 521 NGYLDTVPVNRILEWEADYLTHLKTNESEILATIDKEGAISKELEAKLKDVTKSFIQSF 579


>gi|261222915|ref|ZP_05937196.1| ATP synthase subunit alpha [Brucella ceti B1/94]
 gi|265998874|ref|ZP_06111431.1| ATP synthase subunit alpha [Brucella ceti M490/95/1]
 gi|260921499|gb|EEX88152.1| ATP synthase subunit alpha [Brucella ceti B1/94]
 gi|262553563|gb|EEZ09332.1| ATP synthase subunit alpha [Brucella ceti M490/95/1]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|357029897|ref|ZP_09091873.1| F0F1 ATP synthase subunit alpha [Mesorhizobium amorphae CCNWGS0123]
 gi|355533786|gb|EHH03105.1| F0F1 ATP synthase subunit alpha [Mesorhizobium amorphae CCNWGS0123]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKVEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE   L+H++S+ + +L+ I+KE  +++D  AKLK  +  F   F 
Sbjct: 450 NGYLDKLAINQVGKFEHGLLSHMRSAGKDVLDGIRKEKALSDDLRAKLKAEIDAFAKTFA 509


>gi|302415164|ref|XP_003005414.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
 gi|261356483|gb|EEY18911.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
          Length = 534

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 88/121 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFA+FGSD DAAT+Q L RG RLTELLKQ QY P+ + E V +IY GV
Sbjct: 414 LKLFLAQYREVAAFARFGSDSDAATKQTLARGERLTELLKQKQYSPLGVNEMVPIIYAGV 473

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GH+D +   KI  +E +FL H+K++E  LL +I KEG +++D +A+LK V   F+ +F 
Sbjct: 474 NGHIDNIPVDKILQWESDFLNHLKTNEADLLATIDKEGALSKDLEARLKDVTQTFVKSFL 533

Query: 121 G 121
           G
Sbjct: 534 G 534


>gi|294851039|ref|ZP_06791715.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|294821682|gb|EFG38678.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|161619721|ref|YP_001593608.1| F0F1 ATP synthase subunit alpha [Brucella canis ATCC 23365]
 gi|163845377|ref|YP_001623032.1| F0F1 ATP synthase subunit alpha [Brucella suis ATCC 23445]
 gi|225628355|ref|ZP_03786389.1| ATP synthase F1, alpha subunit [Brucella ceti str. Cudo]
 gi|256370205|ref|YP_003107716.1| F0F1 ATP synthase subunit alpha [Brucella microti CCM 4915]
 gi|260568872|ref|ZP_05839340.1| ATP synthase subunit alpha [Brucella suis bv. 4 str. 40]
 gi|261214760|ref|ZP_05929041.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 3 str.
           Tulya]
 gi|261219375|ref|ZP_05933656.1| ATP synthase subunit alpha [Brucella ceti M13/05/1]
 gi|261316294|ref|ZP_05955491.1| ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|261322437|ref|ZP_05961634.1| ATP synthase subunit alpha [Brucella ceti M644/93/1]
 gi|261325829|ref|ZP_05965026.1| ATP synthase subunit alpha [Brucella neotomae 5K33]
 gi|261754200|ref|ZP_05997909.1| ATP synthase subunit alpha [Brucella suis bv. 3 str. 686]
 gi|261757446|ref|ZP_06001155.1| ATP synthase subunit alpha [Brucella sp. F5/99]
 gi|265987361|ref|ZP_06099918.1| ATP synthase subunit alpha [Brucella pinnipedialis M292/94/1]
 gi|306844781|ref|ZP_07477366.1| ATP synthase F1, alpha subunit [Brucella inopinata BO1]
 gi|340791395|ref|YP_004756860.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|376275603|ref|YP_005116042.1| ATP synthase F1 subunit alpha [Brucella canis HSK A52141]
 gi|189081289|sp|A9M839.1|ATPA_BRUC2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081290|sp|A9WWS4.1|ATPA_BRUSI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161336532|gb|ABX62837.1| ATP synthase F1, alpha subunit [Brucella canis ATCC 23365]
 gi|163676100|gb|ABY40210.1| ATP synthase F1, alpha subunit [Brucella suis ATCC 23445]
 gi|225616201|gb|EEH13249.1| ATP synthase F1, alpha subunit [Brucella ceti str. Cudo]
 gi|256000368|gb|ACU48767.1| ATP synthase subunit A [Brucella microti CCM 4915]
 gi|260154256|gb|EEW89338.1| ATP synthase subunit alpha [Brucella suis bv. 4 str. 40]
 gi|260916367|gb|EEX83228.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 3 str.
           Tulya]
 gi|260924464|gb|EEX91032.1| ATP synthase subunit alpha [Brucella ceti M13/05/1]
 gi|261295127|gb|EEX98623.1| ATP synthase subunit alpha [Brucella ceti M644/93/1]
 gi|261295517|gb|EEX99013.1| ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|261301809|gb|EEY05306.1| ATP synthase subunit alpha [Brucella neotomae 5K33]
 gi|261737430|gb|EEY25426.1| ATP synthase subunit alpha [Brucella sp. F5/99]
 gi|261743953|gb|EEY31879.1| ATP synthase subunit alpha [Brucella suis bv. 3 str. 686]
 gi|264659558|gb|EEZ29819.1| ATP synthase subunit alpha [Brucella pinnipedialis M292/94/1]
 gi|306274953|gb|EFM56723.1| ATP synthase F1, alpha subunit [Brucella inopinata BO1]
 gi|340559854|gb|AEK55092.1| F0F1 ATP synthase, alpha subunit [Brucella pinnipedialis B2/94]
 gi|363404170|gb|AEW14465.1| ATP synthase F1, alpha subunit [Brucella canis HSK A52141]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|265984808|ref|ZP_06097543.1| ATP synthase subunit alpha [Brucella sp. 83/13]
 gi|306839486|ref|ZP_07472294.1| ATP synthase F1, alpha subunit [Brucella sp. NF 2653]
 gi|264663400|gb|EEZ33661.1| ATP synthase subunit alpha [Brucella sp. 83/13]
 gi|306405431|gb|EFM61702.1| ATP synthase F1, alpha subunit [Brucella sp. NF 2653]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYVGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|430814526|emb|CCJ28254.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 524

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLD +T+  L+RG RLTELLKQGQY PM +EEQV +IY GV
Sbjct: 406 LKLFLAQYREVAAFAQFGSDLDTSTKLTLSRGERLTELLKQGQYSPMPVEEQVPLIYAGV 465

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDKL   KI  FE+ FL H + +   LL +IKKE  ++++T+ K++T +  FL  F
Sbjct: 466 NGLLDKLPVEKIGAFEQAFLIHFRQNFSQLLATIKKEASLSKETEEKIRTAIQEFLKTF 524


>gi|148558963|ref|YP_001259640.1| F0F1 ATP synthase subunit alpha [Brucella ovis ATCC 25840]
 gi|166201652|sp|A5VSE3.1|ATPA_BRUO2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148370220|gb|ABQ60199.1| ATP synthase F1, alpha subunit [Brucella ovis ATCC 25840]
          Length = 509

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|306841514|ref|ZP_07474213.1| ATP synthase F1, alpha subunit [Brucella sp. BO2]
 gi|306288425|gb|EFM59782.1| ATP synthase F1, alpha subunit [Brucella sp. BO2]
          Length = 509

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRSEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|330945439|ref|XP_003306555.1| hypothetical protein PTT_19731 [Pyrenophora teres f. teres 0-1]
 gi|311315889|gb|EFQ85353.1| hypothetical protein PTT_19731 [Pyrenophora teres f. teres 0-1]
          Length = 1080

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1    MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
            +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 960  LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGI 1019

Query: 61   RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
             G LD +   KI  +E +FLAH+KS+E  +L  I +EG ++++ +A+L+ V  +F  +F
Sbjct: 1020 NGLLDNVPVNKILQWEADFLAHLKSNESDMLNKIDREGALSKELEAQLREVAQSFTKSF 1078


>gi|218661936|ref|ZP_03517866.1| F0F1 ATP synthase subunit alpha [Rhizobium etli IE4771]
          Length = 167

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 48  IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 107

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  A +  FE+  L++++S    +L++I+ E  I++DT  KL   + +F  +F+
Sbjct: 108 NGYLDKLPVASVGKFEQGLLSYLRSEGSTILDAIRTEKAISDDTKGKLTAALDSFAKSFS 167


>gi|408376409|ref|ZP_11174014.1| F0F1 ATP synthase subunit alpha [Agrobacterium albertimagni AOL15]
 gi|407749876|gb|EKF61387.1| F0F1 ATP synthase subunit alpha [Agrobacterium albertimagni AOL15]
          Length = 509

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQAQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+   ++  FE+  L+++ S  + +L++I+ +  I++DT  KLK  + +F  NF 
Sbjct: 450 NGYLDKVPVNQVGKFEQGLLSYLHSEGKAILDAIRTDKAISDDTKGKLKAALDSFAKNFA 509


>gi|418939196|ref|ZP_13492600.1| ATP synthase subunit alpha [Rhizobium sp. PDO1-076]
 gi|375054108|gb|EHS50499.1| ATP synthase subunit alpha [Rhizobium sp. PDO1-076]
          Length = 509

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+   ++  FE+  L++++S  + +L++I+ E  I++DT  KLK  +  F  NF 
Sbjct: 450 NGYLDKVAVNQVGKFEQGLLSYLRSEGKAILDAIRTEKAISDDTKGKLKAALDTFAKNFA 509


>gi|407778554|ref|ZP_11125817.1| F0F1 ATP synthase subunit alpha [Nitratireductor pacificus pht-3B]
 gi|407299631|gb|EKF18760.1| F0F1 ATP synthase subunit alpha [Nitratireductor pacificus pht-3B]
          Length = 509

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL    +T FE+  LAH+++  + +L++I+KE  +++D   KLK  +  F  NF 
Sbjct: 450 NGYLDKLALKDVTRFEQGLLAHMRAEGKDVLDAIRKEKALSDDLREKLKGQIEAFAKNFA 509


>gi|402489876|ref|ZP_10836669.1| F0F1 ATP synthase subunit alpha [Rhizobium sp. CCGE 510]
 gi|401811215|gb|EJT03584.1| F0F1 ATP synthase subunit alpha [Rhizobium sp. CCGE 510]
          Length = 509

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL  A +  FE+ FL++++S    +L++I+ E  I++DT  KL   +  F  +F
Sbjct: 450 HGYLDKLPVASVGKFEQGFLSYLRSEGSAILDAIRTEKAISDDTRGKLTAALDTFAKSF 508


>gi|346977197|gb|EGY20649.1| ATP synthase subunit alpha [Verticillium dahliae VdLs.17]
          Length = 553

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 88/121 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFA+FGSD DAAT+Q L RG RLTELLKQ QY P+ + E V +IY GV
Sbjct: 433 LKLFLAQYREVAAFARFGSDSDAATKQTLARGERLTELLKQKQYSPLGVNEMVPIIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GH+D +   KI  +E +FL H+K++E  LL +I KEG +++D +A+LK V   F+ +F 
Sbjct: 493 NGHIDNVPVDKILQWESDFLNHLKTNEADLLATIDKEGALSKDLEARLKDVTQTFVKSFL 552

Query: 121 G 121
           G
Sbjct: 553 G 553


>gi|294085409|ref|YP_003552169.1| ATP synthase F1 subunit alpha [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664984|gb|ADE40085.1| ATP synthase F1, alpha subunit [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 511

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SD+DA+T+ LL RG RLTELLKQ QY PM IEEQVAVI+ GV
Sbjct: 392 IKLELAQYREMAAFAQFASDMDASTRALLARGARLTELLKQPQYSPMQIEEQVAVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD ++ + I  FE   L H++S+   +L++I++E K+++DT+AKL   +  F  +F+
Sbjct: 452 KGYLDSIEVSDIGRFEAGLLDHLRSTASDVLKTIQQEQKLSDDTEAKLAAAIEAFQKSFS 511


>gi|451849960|gb|EMD63263.1| hypothetical protein COCSADRAFT_38129 [Cochliobolus sativus ND90Pr]
          Length = 550

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDAATKQTLARGERLTELLKQKQYSPMAVNEMVPLIYAGI 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KI  +E +FLAH++S+E  +L  I +EG ++++ +AKLK V  +F  +F
Sbjct: 490 NGLLDNVPTNKILQWEADFLAHLRSNESDMLAQIDREGALSKELEAKLKEVAQSFTKSF 548


>gi|86359453|ref|YP_471345.1| F0F1 ATP synthase subunit alpha [Rhizobium etli CFN 42]
 gi|119367960|sp|Q2K3G8.1|ATPA_RHIEC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86283555|gb|ABC92618.1| H(+)-transporting ATP synthase protein, alpha subunit [Rhizobium
           etli CFN 42]
          Length = 509

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL  A++  FE+  L++++S    +L++I+ E  I++DT  KL   + +F  +F
Sbjct: 450 NGYLDKLPVAQVGKFEQGLLSYLRSEGSAILDAIRTEKAISDDTKGKLTAALDSFAKSF 508


>gi|428672475|gb|EKX73389.1| ATP synthase alpha chain subunit, putative [Babesia equi]
          Length = 543

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 89/118 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+RE+AAFAQFGSDLDAATQ+LL RG  LTELLKQ QY P+ I  QV +IY GV
Sbjct: 420 MKLDLAQFREIAAFAQFGSDLDAATQKLLTRGTLLTELLKQKQYAPLPIPLQVCIIYGGV 479

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLAN 118
            G LDK+DP  +  FE  F+ H+ + +  LL+ I++ G++T + +A+LK V+ NF+++
Sbjct: 480 NGLLDKIDPKDVMKFEALFIDHLNTQQADLLKKIEEGGQLTPELEARLKQVIENFISS 537


>gi|239832879|ref|ZP_04681208.1| ATP synthase F1, alpha subunit [Ochrobactrum intermedium LMG 3301]
 gi|444309784|ref|ZP_21145415.1| F0F1 ATP synthase subunit alpha [Ochrobactrum intermedium M86]
 gi|239825146|gb|EEQ96714.1| ATP synthase F1, alpha subunit [Ochrobactrum intermedium LMG 3301]
 gi|443486866|gb|ELT49637.1| F0F1 ATP synthase subunit alpha [Ochrobactrum intermedium M86]
          Length = 509

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  +++  FE+  LA +++  + +L+ I+ E  IT+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVSQVGKFEEGLLASLRTEHKDVLDGIRNEKAITDDLKAKLKAAIDAFAKSFA 509


>gi|421589518|ref|ZP_16034650.1| F0F1 ATP synthase subunit alpha [Rhizobium sp. Pop5]
 gi|403705528|gb|EJZ21092.1| F0F1 ATP synthase subunit alpha [Rhizobium sp. Pop5]
          Length = 509

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL  A++  FE+  L++++S    +L++I+ E  I++DT  KL   + +F  +F
Sbjct: 450 NGYLDKLPVAQVGKFEQGLLSYLRSEGSAILDAIRTEKAISDDTRGKLTAALDSFAKSF 508


>gi|395331832|gb|EJF64212.1| ATP synthase F1 alpha subunit [Dichomitus squalens LYAD-421 SS1]
          Length = 543

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A+E QV +IY GV
Sbjct: 424 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLAMEIQVPIIYAGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF AH+ S++  LL+ I K G+IT + ++++K VV + +++FT
Sbjct: 484 NGLLDPIPVDQITRWEAEFRAHLTSAQSALLQEISK-GQITPEIESQIKKVVEDHVSSFT 542


>gi|163792318|ref|ZP_02186295.1| primosome assembly protein PriA [alpha proteobacterium BAL199]
 gi|159182023|gb|EDP66532.1| primosome assembly protein PriA [alpha proteobacterium BAL199]
          Length = 511

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLDA+TQ+LL RG RLTELLKQ Q+ PM +EEQV  I+ GV
Sbjct: 392 IKLELAQYREMAAFAQFASDLDASTQRLLARGSRLTELLKQPQFSPMPVEEQVVSIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+  A I  FE++ L+ IKS   G+L++I+ E  ++++T+ KLK  + +F   F 
Sbjct: 452 RGYLDKIAVADIGRFEQQLLSDIKSKAPGILDAIRAEKALSDETEGKLKEFMDSFAKTFA 511


>gi|9695382|ref|NP_037604.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|334701708|ref|YP_004564241.1| ATP synthase F1 subunit alpha [Phytophthora phaseoli]
 gi|6692635|gb|AAF24778.1|U17009_10 ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58012140|gb|AAW62548.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58201979|gb|AAW67034.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58202026|gb|AAW67080.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|301505171|gb|ADK76215.1| ATP synthase F1 subunit alpha [Phytophthora phaseoli]
          Length = 509

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E+Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVEDQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI+ FE  +L  I+++   +LE I  + +I+++ D KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKISIFETNWLNFIQNNHSDILEEILTKKEISKELDKKLNTLAIDFTNNF 506


>gi|398410588|ref|XP_003856642.1| F1F0 ATP synthase subunit alpha [Zymoseptoria tritici IPO323]
 gi|339476527|gb|EGP91618.1| hypothetical protein MYCGRDRAFT_102837 [Zymoseptoria tritici
           IPO323]
          Length = 550

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 85/109 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L+RG RLTELLKQ QY PM + E V +IY GV
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDASTKQTLSRGERLTELLKQKQYQPMPVSEMVPLIYAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLK 109
            GHLDK+   KI  +E ++L+H++S+E  LL +I KEG +++D + KLK
Sbjct: 491 NGHLDKIPVNKILKWESDYLSHLRSNESELLSTIDKEGALSKDLEGKLK 539


>gi|334701567|ref|YP_004563940.1| ATP synthase F1 subunit 1 [Phytophthora mirabilis]
 gi|301505294|gb|ADK76335.1| ATP synthase F1 subunit 1 [Phytophthora mirabilis]
          Length = 509

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E+Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVEDQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI+ FE  +L  I+++   +LE I  + +I+++ D KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKISIFETNWLNFIQNNHSDILEEILTKKEISKELDKKLNTLAIDFTNNF 506


>gi|401626678|gb|EJS44603.1| atp1p [Saccharomyces arboricola H-6]
          Length = 547

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 429 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL +I+++G+++++  A LK+   +F+A F
Sbjct: 489 NGHLDNIELSRIGEFESSFLSYLKSNHDDLLTTIREKGELSKELMASLKSATESFVATF 547


>gi|238580562|ref|XP_002389325.1| hypothetical protein MPER_11556 [Moniliophthora perniciosa FA553]
 gi|215451474|gb|EEB90255.1| hypothetical protein MPER_11556 [Moniliophthora perniciosa FA553]
          Length = 129

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/120 (58%), Positives = 90/120 (75%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 10  LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLATEVQVPIIYAGV 69

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF AH+ S+++ LLE I   G +T + +AK+K VV + ++ FT
Sbjct: 70  NGLLDSIPVDQITKWEGEFRAHLTSTQQPLLEEISA-GNVTPEMEAKIKKVVEDHVSTFT 128


>gi|255730951|ref|XP_002550400.1| ATP synthase alpha chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240132357|gb|EER31915.1| ATP synthase alpha chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 447

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYHPLAAEEQVPLIFAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+ FL H+KS+E G+LE+IK +G++++D    L+ V   F++ F
Sbjct: 389 NGFLDNIALDRIGEFEEAFLGHLKSNEAGILEAIKTKGELSKDELEHLRKVTEEFVSTF 447


>gi|39933255|ref|NP_945531.1| ATP synthase F0F1 subunit alpha [Rhodopseudomonas palustris CGA009]
 gi|192288606|ref|YP_001989211.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris TIE-1]
 gi|81698439|sp|Q6NDD0.1|ATPA_RHOPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|39652880|emb|CAE25622.1| putative H+-transporting ATP synthase alpha chain [Rhodopseudomonas
           palustris CGA009]
 gi|192282355|gb|ACE98735.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris TIE-1]
          Length = 510

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   LA ++  E G+LE+I+    +++DT AKLK VV ++   F
Sbjct: 451 NGYLDALPLNKVRAFEDGLLALLRGKESGILEAIRTSRDLSDDTAAKLKAVVESYAKTF 509


>gi|91975037|ref|YP_567696.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisB5]
 gi|123722174|sp|Q13DP4.1|ATPA_RHOPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91681493|gb|ABE37795.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisB5]
          Length = 510

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  AK+ +FE   L+ ++  E  +L++I+    +++DT AKLK V+ ++   F
Sbjct: 451 NGYLDALPVAKVRSFEDGLLSLLRGKESAILDAIRTSRDLSDDTAAKLKAVIESYAKTF 509


>gi|336287221|ref|YP_004564446.1| ATP synthase F1 subunit alpha [Phytophthora ipomoeae]
 gi|301505253|gb|ADK76295.1| ATP synthase F1 subunit alpha [Phytophthora ipomoeae]
          Length = 509

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVENQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI+ FE  +L  I+++   +LE I  + +I+++ D KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKISIFETNWLNFIQNNHSDILEEILTKKEISKELDKKLNTLAIDFTNNF 506


>gi|452751144|ref|ZP_21950890.1| ATP synthase alpha chain [alpha proteobacterium JLT2015]
 gi|451961294|gb|EMD83704.1| ATP synthase alpha chain [alpha proteobacterium JLT2015]
          Length = 509

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+AAFAQFGSDLD +TQ+LLNRG RLTELLKQGQY PM +EEQV  I+ GV
Sbjct: 390 IKLDLAQYREMAAFAQFGSDLDPSTQKLLNRGARLTELLKQGQYSPMPVEEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T FE  FL  ++++ + +L+SI+  GK+ +DT   L  ++  F   F
Sbjct: 450 EGYLDGIPTDDVTRFESAFLTDMRANHKDVLDSIRTSGKLEDDTVKSLHEILKEFTRTF 508


>gi|337265732|ref|YP_004609787.1| ATP synthase F1 subunit alpha [Mesorhizobium opportunistum WSM2075]
 gi|336026042|gb|AEH85693.1| ATP synthase F1, alpha subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 509

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE   L+H++++ + +L++I+KE  +++D  AKLK  +  F   F 
Sbjct: 450 NGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRKEKALSDDLRAKLKAEIDAFAKTFA 509


>gi|433772609|ref|YP_007303076.1| proton translocating ATP synthase, F1 alpha subunit [Mesorhizobium
           australicum WSM2073]
 gi|433664624|gb|AGB43700.1| proton translocating ATP synthase, F1 alpha subunit [Mesorhizobium
           australicum WSM2073]
          Length = 509

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE   L+H++++ + +L++I+KE  +++D  AKLK  +  F   F 
Sbjct: 450 NGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRKEKALSDDLRAKLKAEIDAFAKTFA 509


>gi|13473458|ref|NP_105025.1| ATP synthase F0F1 subunit alpha [Mesorhizobium loti MAFF303099]
 gi|81779154|sp|Q98EV6.1|ATPA_RHILO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|14024207|dbj|BAB50811.1| ATP synthetase alpha [Mesorhizobium loti MAFF303099]
          Length = 509

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE   L+H++++ + +L++I+KE  +++D  AKLK  +  F   F 
Sbjct: 450 NGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRKEKALSDDLRAKLKAEIDAFAKTFA 509


>gi|113170490|ref|YP_717281.1| Atp1 [Ostreococcus tauri]
 gi|112806897|emb|CAL36403.1| unnamed protein product [Ostreococcus tauri]
          Length = 508

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 87/119 (73%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQGQ+VPM +E+QV VIY   
Sbjct: 390 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGSRLTEVLKQGQFVPMPVEQQVVVIYAAT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD L    I+++E   L   KS +  LL++IK EG ++E+T AKLK     +   F
Sbjct: 450 KGYLDSLKMTDISSYEDGLL---KSVDGSLLQTIKSEGVLSENTLAKLKEFCDTYTQQF 505


>gi|363755146|ref|XP_003647788.1| hypothetical protein Ecym_7121 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891824|gb|AET40971.1| hypothetical protein Ecym_7121 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 548

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQSQYSPLSAEEQVPLIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ ++I  FE EFLA++KSS   ++ +I+++G++++D  + LK+   +F+A F
Sbjct: 490 NGYLDNVELSRIAEFETEFLAYLKSSHDEIISAIREKGELSKDLLSTLKSATESFVATF 548


>gi|319780915|ref|YP_004140391.1| ATP synthase F1 subunit alpha [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166803|gb|ADV10341.1| ATP synthase F1, alpha subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 509

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE   L+H++++ + +L++I+KE  +++D  AKLK  +  F   F 
Sbjct: 450 NGYLDKLPVNQVGKFEHGLLSHMRAAGKDVLDAIRKEKALSDDLRAKLKAEIDAFAKTFA 509


>gi|329847482|ref|ZP_08262510.1| ATP synthase F1, alpha subunit [Asticcacaulis biprosthecum C19]
 gi|328842545|gb|EGF92114.1| ATP synthase F1, alpha subunit [Asticcacaulis biprosthecum C19]
          Length = 510

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K +LAQYRE+AAFA+FGSDLDAATQ+LL RG RLTELLKQ QY P+ +EEQVAVIY G 
Sbjct: 391 IKGDLAQYREMAAFAKFGSDLDAATQRLLARGARLTELLKQPQYSPLKVEEQVAVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+    +  +EKE L+ +++    LL +I+ +  ++ + + KLKTVVT+F A+F 
Sbjct: 451 RGYLDKVAVGDVRRYEKELLSLLRTRHVDLLSAIRDQKALSAELEDKLKTVVTDFTASFA 510


>gi|403215038|emb|CCK69538.1| hypothetical protein KNAG_0C04360 [Kazachstania naganishii CBS
           8797]
          Length = 550

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 432 LKLFLAQYREVAAFAQFGSDLDASTKQTLTRGERLTQLLKQSQYRPLSAEEQVPLIYAGV 491

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +D +++  FE  FLA++KS+   +L  I+  G++T+D  A LK+   +F+A F
Sbjct: 492 NGYLDNVDLSRMAEFETSFLAYLKSNHEQILTGIRDTGELTKDLMAALKSATESFVATF 550


>gi|71027907|ref|XP_763597.1| ATP synthase F1 subunit alpha [Theileria parva strain Muguga]
 gi|68350550|gb|EAN31314.1| ATP synthase F1, alpha chain, putative [Theileria parva]
          Length = 545

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+RE+ AF+QFGSDLD++TQQLL RG  LTELLKQ QY P++I  Q+ VIY GV
Sbjct: 424 MKLDLAQFREIQAFSQFGSDLDSSTQQLLTRGTLLTELLKQKQYAPLSIPLQICVIYGGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LDKLDP  +  +E++ L H+ +    LL ++++EG ++ +T+AKLK+ +  F+ NF 
Sbjct: 484 NGLLDKLDPKLVGKYEEQLLQHLTTQHSDLLSTLEREGVLSPETEAKLKSTLEQFVDNFN 543


>gi|23502654|ref|NP_698781.1| ATP synthase F0F1 subunit alpha [Brucella suis 1330]
 gi|376281449|ref|YP_005155455.1| F0F1 ATP synthase subunit alpha [Brucella suis VBI22]
 gi|384225441|ref|YP_005616605.1| F0F1 ATP synthase subunit alpha [Brucella suis 1330]
 gi|81752065|sp|Q8FYR3.1|ATPA_BRUSU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|23348662|gb|AAN30696.1| ATP synthase F1, alpha subunit [Brucella suis 1330]
 gi|343383621|gb|AEM19113.1| F0F1 ATP synthase subunit alpha [Brucella suis 1330]
 gi|358259048|gb|AEU06783.1| F0F1 ATP synthase subunit alpha [Brucella suis VBI22]
          Length = 509

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQ+RE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQHREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|150406456|ref|YP_001315101.1| ATP synthase F1 subunit alpha [Chlorokybus atmophyticus]
 gi|126507693|gb|ABO15090.1| ATP synthase F1 subunit alpha [Chlorokybus atmophyticus]
          Length = 510

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 3/120 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+QV VIY  V
Sbjct: 391 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQDQYSPIPIEKQVVVIYAAV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LDK+  ++I+TFE+E L         + ++I++E +IT + D +L T +  F A F+
Sbjct: 451 KGYLDKISVSQISTFEQELLQRCPPE---IFKTIREEKQITPELDNRLATFLKQFTAEFS 507


>gi|17986533|ref|NP_539167.1| ATP synthase F0F1 subunit alpha [Brucella melitensis bv. 1 str.
           16M]
 gi|225853245|ref|YP_002733478.1| F0F1 ATP synthase subunit alpha [Brucella melitensis ATCC 23457]
 gi|256263267|ref|ZP_05465799.1| ATP synthase subunit alpha [Brucella melitensis bv. 2 str. 63/9]
 gi|260565711|ref|ZP_05836194.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. 16M]
 gi|265991826|ref|ZP_06104383.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995665|ref|ZP_06108222.1| ATP synthase subunit alpha [Brucella melitensis bv. 3 str. Ether]
 gi|384212157|ref|YP_005601240.1| ATP synthase F1 subunit alpha [Brucella melitensis M5-90]
 gi|384409257|ref|YP_005597878.1| F0F1 ATP synthase subunit alpha [Brucella melitensis M28]
 gi|384445810|ref|YP_005604529.1| F0F1 ATP synthase subunit alpha [Brucella melitensis NI]
 gi|81852463|sp|Q8YJ37.1|ATPA_BRUME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807682|sp|C0RF52.1|ATPA_BRUMB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|17982138|gb|AAL51431.1| ATP synthase alpha chain [Brucella melitensis bv. 1 str. 16M]
 gi|225641610|gb|ACO01524.1| ATP synthase F1, alpha subunit [Brucella melitensis ATCC 23457]
 gi|260151084|gb|EEW86179.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. 16M]
 gi|262766949|gb|EEZ12567.1| ATP synthase subunit alpha [Brucella melitensis bv. 3 str. Ether]
 gi|263002782|gb|EEZ15185.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093231|gb|EEZ17328.1| ATP synthase subunit alpha [Brucella melitensis bv. 2 str. 63/9]
 gi|326409804|gb|ADZ66869.1| F0F1 ATP synthase subunit alpha [Brucella melitensis M28]
 gi|326539521|gb|ADZ87736.1| ATP synthase F1, alpha subunit [Brucella melitensis M5-90]
 gi|349743799|gb|AEQ09342.1| F0F1 ATP synthase subunit alpha [Brucella melitensis NI]
          Length = 509

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I  E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGICNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|261750946|ref|ZP_05994655.1| ATP synthase subunit alpha [Brucella suis bv. 5 str. 513]
 gi|261740699|gb|EEY28625.1| ATP synthase subunit alpha [Brucella suis bv. 5 str. 513]
          Length = 509

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RL ELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLIELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFA 509


>gi|365762177|gb|EHN03780.1| Atp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 545

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDSIELSRIGEFESSFLSYLKSNHDELLTEIREKGELSKELMASLKSATESFVATF 545


>gi|334701749|ref|YP_004564307.1| ATP synthase F1 subunit alpha [Phytophthora andina]
 gi|301505212|gb|ADK76255.1| ATP synthase F1 subunit alpha [Phytophthora andina]
          Length = 509

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ LNRGVRLTE+LKQG  +P+++E+Q+ +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLNRGVRLTEMLKQGLNIPLSVEDQIVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI  FE  +L  I+++   +LE I  + +I+++ D KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKILIFETNWLNFIQNNHSDILEEILTKKEISKELDKKLNTLAIDFTNNF 506


>gi|365767000|gb|EHN08488.1| Atp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 545

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|2447013|dbj|BAA22509.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|496674|emb|CAA56001.1| C-545 protein [Saccharomyces cerevisiae]
 gi|536167|emb|CAA84924.1| ATP1 [Saccharomyces cerevisiae]
 gi|332322831|dbj|BAK20454.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322832|dbj|BAK20455.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322833|dbj|BAK20456.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
          Length = 545

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|330443397|ref|NP_009453.2| F1F0 ATP synthase subunit alpha [Saccharomyces cerevisiae S288c]
 gi|341940649|sp|P07251.5|ATPA_YEAST RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|307568098|pdb|2XOK|A Chain A, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568099|pdb|2XOK|B Chain B, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568100|pdb|2XOK|C Chain C, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|2447011|dbj|BAA22508.1| F1F0-ATPase alpha subunit precursor [Saccharomyces cerevisiae]
 gi|51013389|gb|AAT92988.1| YBL099W [Saccharomyces cerevisiae]
 gi|151946302|gb|EDN64524.1| F1F0 ATP synthase alpha subunit [Saccharomyces cerevisiae YJM789]
 gi|190408917|gb|EDV12182.1| F1F0-ATPase alpha subunit [Saccharomyces cerevisiae RM11-1a]
 gi|207347937|gb|EDZ73955.1| YBL099Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271185|gb|EEU06270.1| Atp1p [Saccharomyces cerevisiae JAY291]
 gi|259144745|emb|CAY77684.1| Atp1p [Saccharomyces cerevisiae EC1118]
 gi|323310139|gb|EGA63331.1| Atp1p [Saccharomyces cerevisiae FostersO]
 gi|323356219|gb|EGA88023.1| Atp1p [Saccharomyces cerevisiae VL3]
 gi|329136702|tpg|DAA07026.2| TPA: F1F0 ATP synthase subunit alpha [Saccharomyces cerevisiae
           S288c]
 gi|392301198|gb|EIW12287.1| Atp1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 545

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|1660995|dbj|BAA13613.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 545


>gi|255088599|ref|XP_002506222.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226521493|gb|ACO67480.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 561

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 85/119 (71%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQGQ+VPM IE+QV VIY   
Sbjct: 441 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGSRLTEVLKQGQFVPMPIEQQVVVIYAAT 500

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    I  FE   L  +  +   LLE+I+ E  I++ TDAKLK +   +   F
Sbjct: 501 KGYLDKVAINDIGAFEAGLLKEVSPA---LLETIRTEKVISDSTDAKLKELCEGYTKGF 556


>gi|119389904|pdb|2HLD|A Chain A, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389905|pdb|2HLD|B Chain B, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389906|pdb|2HLD|C Chain C, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389913|pdb|2HLD|J Chain J, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389914|pdb|2HLD|K Chain K, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389915|pdb|2HLD|L Chain L, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389922|pdb|2HLD|S Chain S, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389923|pdb|2HLD|T Chain T, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389924|pdb|2HLD|U Chain U, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|224510808|pdb|3FKS|A Chain A, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510809|pdb|3FKS|B Chain B, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510810|pdb|3FKS|C Chain C, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510817|pdb|3FKS|J Chain J, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510818|pdb|3FKS|K Chain K, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510819|pdb|3FKS|L Chain L, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510826|pdb|3FKS|S Chain S, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510827|pdb|3FKS|T Chain T, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510828|pdb|3FKS|U Chain U, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|300193115|pdb|2WPD|A Chain A, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193116|pdb|2WPD|B Chain B, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193117|pdb|2WPD|C Chain C, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|306991949|pdb|3OE7|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991950|pdb|3OE7|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991951|pdb|3OE7|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991958|pdb|3OE7|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991959|pdb|3OE7|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991960|pdb|3OE7|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991967|pdb|3OE7|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991968|pdb|3OE7|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991969|pdb|3OE7|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306992003|pdb|3OEH|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992004|pdb|3OEH|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992005|pdb|3OEH|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992012|pdb|3OEH|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992013|pdb|3OEH|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992014|pdb|3OEH|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992021|pdb|3OEH|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992022|pdb|3OEH|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992023|pdb|3OEH|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|372467205|pdb|3ZRY|A Chain A, Rotor Architecture In The F(1)-C(10)-Ring Complex Of The
           Yeast F-Atp Synthase
 gi|372467206|pdb|3ZRY|B Chain B, Rotor Architecture In The F(1)-C(10)-Ring Complex Of The
           Yeast F-Atp Synthase
 gi|372467207|pdb|3ZRY|C Chain C, Rotor Architecture In The F(1)-C(10)-Ring Complex Of The
           Yeast F-Atp Synthase
 gi|449802270|pdb|3ZIA|A Chain A, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802271|pdb|3ZIA|B Chain B, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802272|pdb|3ZIA|C Chain C, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802280|pdb|3ZIA|K Chain K, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802281|pdb|3ZIA|L Chain L, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
 gi|449802282|pdb|3ZIA|M Chain M, The Structure Of F1-atpase From Saccharomyces Cerevisiae
           Inhibited By Its Regulatory Protein If1
          Length = 510

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 392 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 452 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510


>gi|83944758|ref|ZP_00957124.1| ATP synthase subunit A [Oceanicaulis sp. HTCC2633]
 gi|83851540|gb|EAP89395.1| ATP synthase subunit A [Oceanicaulis sp. HTCC2633]
          Length = 509

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LL+RG RLTELLKQ Q+ P+++EEQV V+Y G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQKLLSRGERLTELLKQPQFSPLSMEEQVCVMYAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK++ + I  +E+E L H+ + +  LL +I+   K++++++A LK  +  F ANF
Sbjct: 450 RGYLDKIEVSAIGRYEEELLRHLHAEKADLLAAIRDTKKLSDESEAALKATLETFTANF 508


>gi|306992030|pdb|3OFN|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992031|pdb|3OFN|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992032|pdb|3OFN|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992039|pdb|3OFN|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992040|pdb|3OFN|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992041|pdb|3OFN|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992048|pdb|3OFN|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992049|pdb|3OFN|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992050|pdb|3OFN|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
          Length = 510

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 392 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 452 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510


>gi|189203089|ref|XP_001937880.1| ATP synthase subunit alpha, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187984979|gb|EDU50467.1| ATP synthase subunit alpha, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 690

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDAAT+Q L+RG RLTELLKQ QY PMA+ E V +IY G+
Sbjct: 570 LKLFLAQYREVAAFAQFGSDLDAATKQTLSRGERLTELLKQKQYSPMAVNEMVPLIYAGI 629

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KI  +E +FLAH+K++E  +L  I +EG ++++ +A+L+ V  +F  +F
Sbjct: 630 NGLLDNVPVNKILQWEADFLAHLKANESDMLNKIDREGALSKELEAQLREVAQSFTKSF 688


>gi|110225671|ref|YP_665677.1| ATP synthase F1 subunit alpha [Nephroselmis olivacea]
 gi|6066186|gb|AAF03204.1|AF110138_36 ATP synthase F1 subunit alpha [Nephroselmis olivacea]
          Length = 508

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQG YVP+ +E QV +IY   
Sbjct: 390 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGQRLTEILKQGLYVPIPVELQVVIIYSAT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD++  + I +FE+  +  +  +   +LE+I+KE  ++  TDA LK     F+ NF
Sbjct: 450 RGYLDRIPVSSIASFEQGLVKEVPPA---ILETIRKERVLSPSTDAALKDFFNKFMTNF 505


>gi|409439351|ref|ZP_11266400.1| ATP synthase subunit alpha, membrane-bound, F1 sector [Rhizobium
           mesoamericanum STM3625]
 gi|408748727|emb|CCM77581.1| ATP synthase subunit alpha, membrane-bound, F1 sector [Rhizobium
           mesoamericanum STM3625]
          Length = 509

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+  A++  FE+  L++++S    +L++I+ +  I++DT  KL   + +F  +F
Sbjct: 450 NGYLDKIPVAQVGKFEQGLLSYLRSEGSAILDTIRTDKAISDDTRGKLTAALDSFAKSF 508


>gi|399040751|ref|ZP_10736049.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF122]
 gi|398061124|gb|EJL52928.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF122]
          Length = 509

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+  A++  FE+  L++++S    +L++I+ +  I++DT  KL   + +F  +F
Sbjct: 450 NGYLDKIPVAQVGKFEQGLLSYLRSEGSAILDTIRTDKAISDDTKGKLTAAIDSFAKSF 508


>gi|406707227|ref|YP_006757579.1| ATP synthase F1 subcomplex subunit alpha [alpha proteobacterium
           HIMB59]
 gi|406653003|gb|AFS48402.1| ATP synthase F1 subcomplex alpha subunit [alpha proteobacterium
           HIMB59]
          Length = 509

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLDA+T+QLL RG RLTELLKQ QYVPM++ +QV  IY GV
Sbjct: 390 IKLELAQYREMAAFSQFASDLDASTKQLLARGERLTELLKQDQYVPMSVADQVLSIYSGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK+D AKI+ F+ +FL  +++    + + I   G  ++++D K++  +  F ANF+
Sbjct: 450 RGFLDKIDTAKISDFQLKFLEGLRAEHGDIFDEINNTGNFSDESDQKIEAYLEKFTANFS 509


>gi|323349841|gb|EGA84054.1| Atp1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 447

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 389 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 447


>gi|344304807|gb|EGW35039.1| F1F0-ATPase complex, F1 alpha subunit [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 545

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQKQYNPLAAEEQVPLIFAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE+ FL H+KS+E  +L++IK +G+++++  A+LKTV  +F+A+F
Sbjct: 487 NGFLDNVALERIGEFEEAFLTHLKSNEVEILDAIKTKGELSKEQLARLKTVTEDFVASF 545


>gi|389696087|ref|ZP_10183729.1| proton translocating ATP synthase, F1 alpha subunit [Microvirga sp.
           WSM3557]
 gi|388584893|gb|EIM25188.1| proton translocating ATP synthase, F1 alpha subunit [Microvirga sp.
           WSM3557]
          Length = 509

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   ++  FE   L+ ++     +LE+I+    ++ D++AKLK VV N+  +F+
Sbjct: 450 NGYLDNLPLNRVRAFEDGLLSLLRGKHADILEAIRASKDLSSDSEAKLKDVVQNYAKSFS 509


>gi|323334707|gb|EGA76080.1| Atp1p [Saccharomyces cerevisiae AWRI796]
          Length = 449

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 389 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 447


>gi|402550241|pdb|4B2Q|A Chain A, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550243|pdb|4B2Q|C Chain C, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550264|pdb|4B2Q|AA Chain a, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550266|pdb|4B2Q|CC Chain c, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
          Length = 485

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 367 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 426

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 427 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 485


>gi|367011789|ref|XP_003680395.1| hypothetical protein TDEL_0C02950 [Torulaspora delbrueckii]
 gi|359748054|emb|CCE91184.1| hypothetical protein TDEL_0C02950 [Torulaspora delbrueckii]
          Length = 546

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLTRGERLTQLLKQSQYAPLAAEEQVPLIYAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D ++ +++  FE  FLA++KS+   +L SI+ +G++ +D   KLK+   +F+A F
Sbjct: 488 NGFIDNIELSRVQEFEASFLAYLKSNHEDILSSIRDKGELPKDLLEKLKSATESFVATF 546


>gi|402550242|pdb|4B2Q|B Chain B, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
 gi|402550265|pdb|4B2Q|BB Chain b, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
           Subtomogram Average
          Length = 486

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 368 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 427

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 428 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 486


>gi|349576287|dbj|GAA21458.1| K7_Atp1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 545

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK    +F+A F
Sbjct: 487 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKNATESFVATF 545


>gi|336323940|ref|YP_004603907.1| ATP synthase subunit alpha [Flexistipes sinusarabici DSM 4947]
 gi|336107521|gb|AEI15339.1| ATP synthase subunit alpha [Flexistipes sinusarabici DSM 4947]
          Length = 502

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAATQ  LNRG RL ELLKQGQY P+A+EEQV  I+ GV
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATQAQLNRGERLVELLKQGQYEPIAVEEQVLSIFTGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    IT FEKE ++  KS+   +LESIKKE K++++   KL+ +V  F   F+
Sbjct: 442 NGYLDDIAVEDITRFEKELISFAKSNHPDVLESIKKEKKLSDELTEKLEKLVEEFKKQFS 501


>gi|448517461|ref|XP_003867801.1| Atp1 ATP synthase alpha subunit [Candida orthopsilosis Co 90-125]
 gi|380352140|emb|CCG22364.1| Atp1 ATP synthase alpha subunit [Candida orthopsilosis]
          Length = 547

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT++LKQ QY P+A EEQV VI+ GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQILKQKQYHPLAAEEQVPVIFAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE+ F+AH+KS    LL+SI+++G++++D   +L  +  +F+ANF 
Sbjct: 488 NGYLDDLPVNKVGEFEEAFVAHLKSDYSDLLKSIQEKGELSKDQLDQLHKITKDFVANFN 547


>gi|315497306|ref|YP_004086110.1| ATP synthase f1 subunit alpha [Asticcacaulis excentricus CB 48]
 gi|315415318|gb|ADU11959.1| ATP synthase F1, alpha subunit [Asticcacaulis excentricus CB 48]
          Length = 510

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K +LAQYRE+AAFA+FGSDLDAATQ+LL RG RLTELLKQ QY P+ +EEQVAVIY G 
Sbjct: 391 IKGDLAQYREMAAFAKFGSDLDAATQRLLARGARLTELLKQPQYSPLKVEEQVAVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LDK+  + +  FE+EFL+ ++     LL +I+++  +T + + +LK +V ++ ANF 
Sbjct: 451 RGYLDKVAVSDVGRFEREFLSLLRGKHVDLLTAIREKKALTPELEEQLKAIVADYAANFA 510


>gi|365987247|ref|XP_003670455.1| hypothetical protein NDAI_0E03950 [Naumovozyma dairenensis CBS 421]
 gi|343769225|emb|CCD25212.1| hypothetical protein NDAI_0E03950 [Naumovozyma dairenensis CBS 421]
          Length = 545

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLSAEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD++D +++  FE  FLA +KSS   +L  I+ +G++T++  A LK+   +F+A F
Sbjct: 487 NGYLDEVDISRVGEFESSFLAFLKSSHEEILSDIRDKGELTKELMAALKSATESFVATF 545


>gi|402773897|ref|YP_006593434.1| ATP synthase subunit alpha [Methylocystis sp. SC2]
 gi|401775917|emb|CCJ08783.1| ATP synthase subunit alpha [Methylocystis sp. SC2]
          Length = 509

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+ +EEQ  VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAVTQRLLNRGARLTELLKQPQFSPLKMEEQTCVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   ++  FE   LA ++S    +LESI+    +T++T AKLK VV +F  +F
Sbjct: 450 NGYLDPLPVNRVRAFEDGLLALLRSQHSDILESIRTTRDLTDETAAKLKNVVESFAKSF 508


>gi|403175206|ref|XP_003334061.2| ATP synthase subunit alpha, mitochondrial [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|375171500|gb|EFP89642.2| ATP synthase subunit alpha, mitochondrial [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 550

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 90/119 (75%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYR+VAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV ++Y GV
Sbjct: 431 LKLYLAQYRDVAAFAQFGSDLDASTRYLLSRGARLTELLKQGQYQPLAFEVQVPILYAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   KI +++  F  H+K+ +  LL+ I   GK+T + ++K+KTVV +F +NF
Sbjct: 491 NGMLDKVPVEKIVSWDLAFRDHLKNEQSALLKDITG-GKMTPEIESKIKTVVKDFTSNF 548


>gi|317052407|ref|YP_004113523.1| ATP synthase F1 subunit alpha [Desulfurispirillum indicum S5]
 gi|316947491|gb|ADU66967.1| ATP synthase F1, alpha subunit [Desulfurispirillum indicum S5]
          Length = 502

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLD AT+ +L++G RL+ELLKQ +Y P  +EEQV  IYCGV
Sbjct: 382 LKLELAQYRELAAFAQFGSDLDPATKAVLDKGARLSELLKQPEYSPFKVEEQVVSIYCGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +  + +  FEKEF+A++KS +  +L+ I ++ ++ E+ + KLK  +  F   F+
Sbjct: 442 KGHLDDIPVSAVGKFEKEFIAYMKSQQSDILKGIVQKKQLDEELEGKLKAAIAEFKKTFS 501


>gi|255931331|ref|XP_002557222.1| Pc12g03370 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581841|emb|CAP79964.1| Pc12g03370 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 554

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 434 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVTDMVPLIFAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI T+E E LAH+KSS   +  +I+KEG+++++++A LK V++ F + F 
Sbjct: 494 NGLLDTIPVDKILTWESELLAHLKSSHPEIQATIEKEGQVSKESEATLKQVISAFNSTFN 553


>gi|344923844|ref|ZP_08777305.1| F0F1 ATP synthase subunit alpha [Candidatus Odyssella
           thessalonicensis L13]
          Length = 510

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 85/121 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+A+FAQF SDLDA+TQ+LL RG RLTELLKQ QY P+++ EQV  I+ GV
Sbjct: 390 IKLELAQYREMASFAQFASDLDASTQKLLARGARLTELLKQPQYSPLSVGEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +DP  ++ FEKE++  +K     L+  I K GK+TE+ +  L      F  NF 
Sbjct: 450 RGYLDHVDPKHVSKFEKEYIQALKIEHPKLIAEIDKAGKLTEEQEKLLNEFAATFAKNFV 509

Query: 121 G 121
           G
Sbjct: 510 G 510


>gi|167648695|ref|YP_001686358.1| F0F1 ATP synthase subunit alpha [Caulobacter sp. K31]
 gi|189081291|sp|B0T338.1|ATPA_CAUSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167351125|gb|ABZ73860.1| ATP synthase F1, alpha subunit [Caulobacter sp. K31]
          Length = 510

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLDA+TQ+LL RG RLTELLKQ QY P A+EEQV VIY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDASTQKLLARGERLTELLKQPQYAPQAVEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD +  + +  FE E LA + S  + LL++I+ +  + +D +  LK+V+ NF A F
Sbjct: 451 RGYLDNIPTSSVRRFESELLARLHSQHKDLLDNIRTKKALDKDLENTLKSVLDNFSATF 509


>gi|407773674|ref|ZP_11120974.1| F0F1 ATP synthase subunit alpha [Thalassospira profundimaris
           WP0211]
 gi|407283120|gb|EKF08661.1| F0F1 ATP synthase subunit alpha [Thalassospira profundimaris
           WP0211]
          Length = 510

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+ AFAQF SDLD ATQ+LL RG RLTELLKQ QY P+ +EEQV VIY GV
Sbjct: 391 IKLELAQYREMEAFAQFASDLDPATQKLLARGARLTELLKQPQYSPLKVEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD +   K+  FE+++L+ I+S+   +L++I+ E  +++D++AKLK  +  F   F 
Sbjct: 451 KGYLDSIPVNKVRAFEEQYLSEIRSAGADILDAIRTEKVLSDDSEAKLKAFLDKFAKTFA 510


>gi|114799519|ref|YP_760595.1| ATP synthase F1 subunit alpha [Hyphomonas neptunium ATCC 15444]
 gi|123128755|sp|Q0C0Z8.1|ATPA_HYPNA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114739693|gb|ABI77818.1| ATP synthase F1, alpha subunit [Hyphomonas neptunium ATCC 15444]
          Length = 511

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MK ELAQYRE+AAFA+FGSDLDAATQ+LLNRG RLTELLKQ QY P+ +EEQV +IY G 
Sbjct: 392 MKGELAQYREMAAFAKFGSDLDAATQRLLNRGARLTELLKQPQYSPLLMEEQVVIIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+    +T +EKE L H++ +++ LL  ++++ ++T + + ++K  + +F + F
Sbjct: 452 RGYLDKVALKDVTRYEKELLVHMRGAKKELLAKLREKKELTSEIEDEIKKALDDFTSKF 510


>gi|11467148|ref|NP_054447.1| ATP synthase F1 subunit alpha [Marchantia polymorpha]
 gi|416672|sp|P26854.2|ATPAM_MARPO RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|786232|gb|AAC09446.1| atpA [Marchantia polymorpha]
          Length = 513

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/119 (57%), Positives = 87/119 (73%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 392 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEILKQAQYSPIPIEKQIVVIYAAV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++  A IT +E+E L   KS + GLL +I ++  ITE   ++L T    F  +F
Sbjct: 452 KGYLDQIPVALITHYEQELL---KSIDPGLLSAIVQQKNITEQISSQLATFCQKFTQSF 507


>gi|50308493|ref|XP_454248.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1352026|sp|P49375.1|ATPA_KLULA RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|899311|emb|CAA55723.1| alpha-subunit of mitochondrial ATP synthase [Kluyveromyces lactis]
 gi|49643383|emb|CAG99335.1| KLLA0E06667p [Kluyveromyces lactis]
          Length = 548

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 93/119 (78%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQNQYSPLAAEEQVPLIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +D ++I  FE +FLA++K++   ++ +I+++G+++++  A LK+   +F+A F
Sbjct: 490 NGYLDNIDISRIAEFETKFLAYLKANHDEIVSAIREKGELSKELLATLKSATESFVATF 548


>gi|126725127|ref|ZP_01740970.1| F0F1 ATP synthase subunit alpha [Rhodobacterales bacterium
           HTCC2150]
 gi|126706291|gb|EBA05381.1| F0F1 ATP synthase subunit alpha [Rhodobacteraceae bacterium
           HTCC2150]
          Length = 512

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQAQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
           +G+LDK++ + +  +EK  LAH++     LL+ I  E  KI  D +AK+K+ +  F A+F
Sbjct: 452 KGYLDKIEVSDVGRYEKGLLAHLRGKNADLLDFITTEDPKIKGDAEAKIKSALDEFAADF 511


>gi|440228165|ref|YP_007335256.1| ATP synthase F1, alpha subunit [Rhizobium tropici CIAT 899]
 gi|440039676|gb|AGB72710.1| ATP synthase F1, alpha subunit [Rhizobium tropici CIAT 899]
          Length = 509

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   ++  FE  FL++++S  + +L++I+ E  I++ T  KL   + +F  +F
Sbjct: 450 NGYLDKLPVNQVGKFEHGFLSYLRSEGKDILDTIRTEKAISDATKGKLTAALDSFAKSF 508


>gi|190893718|ref|YP_001980260.1| F0F1 ATP synthase subunit alpha [Rhizobium etli CIAT 652]
 gi|226739929|sp|B3PQ70.1|ATPA_RHIE6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190698997|gb|ACE93082.1| H(+)-transporting ATP synthase protein, alpha subunit [Rhizobium
           etli CIAT 652]
          Length = 509

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL  A +  FE+  L++++S    +L++I+ E  I++ T  KL   + +F  +F
Sbjct: 450 NGYLDKLPVASVGKFEQGLLSYLRSEGSAILDAIRTEKAISDGTKGKLTAALDSFAKSF 508


>gi|392565497|gb|EIW58674.1| ATP synthase F1 alpha subunit [Trametes versicolor FP-101664 SS1]
          Length = 544

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A+E QV +IY GV
Sbjct: 424 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLAMEIQVPIIYAGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ ++  GLL  I K G IT + + ++K +V   +A+FT
Sbjct: 484 NGLLDPIPVDQITKWEAEFRGHLAAAHSGLLTEIAK-GNITPEIEGQIKKIVEEHVASFT 542


>gi|114328722|ref|YP_745879.1| ATP synthase F0F1 subunit alpha [Granulibacter bethesdensis
           CGDNIH1]
 gi|122326326|sp|Q0BQE6.1|ATPA_GRABC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114316896|gb|ABI62956.1| ATP synthase alpha chain [Granulibacter bethesdensis CGDNIH1]
          Length = 511

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 92/120 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLDA+TQ+LL RG RLTELLKQ Q+ P  +E QVAVI+ GV
Sbjct: 391 IKLELAQYREMAAFAQFASDLDASTQKLLARGARLTELLKQPQFTPYPVELQVAVIFAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD +   K+  FE+  +A ++ +++ +L++I+ + ++  +T+AKL++ +  F+ NFT
Sbjct: 451 KGYLDAIPTDKVVEFERRLVAELRGAQKDILDAIRNDREVKSETEAKLRSFLEGFVKNFT 510


>gi|347734817|ref|ZP_08867804.1| ATP synthase subunit alpha [Azospirillum amazonense Y2]
 gi|346922102|gb|EGY02596.1| ATP synthase subunit alpha [Azospirillum amazonense Y2]
          Length = 509

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLDAATQ+LLNRG RLTELLKQ QY P+ +EEQV  I+ GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDAATQRLLNRGARLTELLKQPQYSPLPVEEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LDK+    +  FE  FL  I+S  + +L +I+ + +I++DT+ KLK  + NF   F 
Sbjct: 450 KGFLDKVKVEDVNRFEARFLDEIRSKGQDILTAIRTDKQISKDTEEKLKAFLENFSKVFA 509


>gi|316931853|ref|YP_004106835.1| ATP synthase F1 subunit alpha [Rhodopseudomonas palustris DX-1]
 gi|315599567|gb|ADU42102.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris DX-1]
          Length = 510

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   LA ++  E  +LE+I+    +++DT AKLK VV ++   F
Sbjct: 451 NGYLDALPLNKVRPFEDGLLALLRGKESAILEAIRTSRDLSDDTAAKLKAVVESYAKTF 509


>gi|367005791|ref|XP_003687627.1| hypothetical protein TPHA_0K00590 [Tetrapisispora phaffii CBS 4417]
 gi|357525932|emb|CCE65193.1| hypothetical protein TPHA_0K00590 [Tetrapisispora phaffii CBS 4417]
          Length = 545

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYAPLSAEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ +++  FE  FLA++K++   +L +I+ +G++ +D  A LK+   +F+A F
Sbjct: 487 NGYLDNIELSRVAEFESSFLAYLKANHETILSTIRDKGELNKDLLATLKSATESFVATF 545


>gi|392589824|gb|EIW79154.1| ATP synthase F1 alpha subunit [Coniophora puteana RWD-64-598 SS2]
          Length = 539

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P++ E QV +IY GV
Sbjct: 420 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLSTEIQVPIIYAGV 479

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ S++  LLE I   G +T + +AK+K VV + +++FT
Sbjct: 480 NGLLDTIPVDQITRWEAEFRQHLTSAQTALLEEI-SSGNVTPEVEAKIKKVVEDHVSSFT 538


>gi|403412986|emb|CCL99686.1| predicted protein [Fibroporia radiculosa]
          Length = 552

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 90/120 (75%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+++E QV +IY GV
Sbjct: 433 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLSMEIQVPIIYAGV 492

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KIT +E EF +H+ S++  LL+ I   G IT + +A++K VV   +A+FT
Sbjct: 493 NGLLDPVPVDKITKWEAEFRSHLTSAQAPLLQEIAA-GSITPELEARIKKVVEEHVASFT 551


>gi|255712379|ref|XP_002552472.1| KLTH0C05698p [Lachancea thermotolerans]
 gi|238933851|emb|CAR22034.1| KLTH0C05698p [Lachancea thermotolerans CBS 6340]
          Length = 548

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY PMA EEQV +IY GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQSQYSPMAAEEQVPLIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ ++I  FE  FLA++KS+   ++ +I+++G+++++    LK+   +F+A F
Sbjct: 490 NGYLDNIELSRIAEFEGSFLAYLKSNHDEIISAIREKGELSKELLGALKSATESFVATF 548


>gi|427427166|ref|ZP_18917211.1| ATP synthase alpha chain [Caenispirillum salinarum AK4]
 gi|425883867|gb|EKV32542.1| ATP synthase alpha chain [Caenispirillum salinarum AK4]
          Length = 512

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LLNRG RLTELLKQ Q+ P+A+EEQV  I+ G 
Sbjct: 392 IKLELAQYREMAAFAQFASDLDPATQKLLNRGERLTELLKQPQFSPLAVEEQVVSIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL    +  FEKE L  I +    +LE+I+ E K+T++   KLK+ + NF  +F
Sbjct: 452 NGYLDKLPVTAVNRFEKELLHEIHAKAPEILETIRTEQKLTDEVKDKLKSFLDNFAKSF 510


>gi|312115962|ref|YP_004013558.1| ATP synthase F1 subunit alpha [Rhodomicrobium vannielii ATCC 17100]
 gi|311221091|gb|ADP72459.1| ATP synthase F1, alpha subunit [Rhodomicrobium vannielii ATCC
           17100]
          Length = 513

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQV VIY G 
Sbjct: 393 IKGELAQYREMAAFAQFGSDLDAATQRLLARGSRLTELLKQPQFSPLKVEEQVVVIYAGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD +  + +  FE+EFL  +++  R LL++I+    ++ +++ KLK ++T+F   F+
Sbjct: 453 RGFLDPIPVSSVGEFEREFLTLLRNEHRDLLDAIRDSKALSPESEQKLKGILTDFSKRFS 512


>gi|71082937|ref|YP_265656.1| ATP synthase F0F1 subunit alpha [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762639|ref|ZP_01264604.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
 gi|115312260|sp|Q4FP36.1|ATPA_PELUB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71062050|gb|AAZ21053.1| H+-transporting two-sector ATPase (F0F1-type ATP synthase) alpha
           chain [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718441|gb|EAS85091.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
          Length = 511

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG +LTELLKQ QY PM + EQV  ++CGV
Sbjct: 391 MKLELAQYREMAAFAQFGSDLDASTQKLLNRGSKLTELLKQKQYSPMTVAEQVISVFCGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD ++   I  FE + +   KS +  +LES+   GK+ EDT+  L   +     NF 
Sbjct: 451 KGYLDDVELKDIAEFESKIIEKCKSEKPEILESVLSSGKLEEDTEKSLVDTIMELKKNFN 510


>gi|170744670|ref|YP_001773325.1| F0F1 ATP synthase subunit alpha [Methylobacterium sp. 4-46]
 gi|226739911|sp|B0UE41.1|ATPA_METS4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|168198944|gb|ACA20891.1| ATP synthase F1, alpha subunit [Methylobacterium sp. 4-46]
          Length = 509

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   ++  FE   L+ ++     LLE+I+    + +D  AKLK VV +F  +F+
Sbjct: 450 NGYLDAIPVNRVRAFEDGLLSTLRGRHADLLETIRTSKDLGDDAAAKLKGVVESFAKSFS 509


>gi|393223066|gb|EJD08550.1| ATP synthase F1, alpha subunit [Fomitiporia mediterranea MF3/22]
          Length = 542

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQGQY P+  E QV +IY GV
Sbjct: 423 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGARLTELLKQGQYQPLPTEVQVPIIYAGV 482

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF +++ SS+  LLE I K G ++ + + K+K VV + +++FT
Sbjct: 483 NGLLDPIPVDQITRWESEFRSYLTSSQTALLEDIAK-GTVSAELEEKIKKVVEDHVSSFT 541


>gi|399090506|ref|ZP_10754082.1| proton translocating ATP synthase, F1 alpha subunit [Caulobacter
           sp. AP07]
 gi|398027724|gb|EJL21261.1| proton translocating ATP synthase, F1 alpha subunit [Caulobacter
           sp. AP07]
          Length = 510

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLDA+TQ+LL RG RLTELLKQ QY P A+EEQV VIY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDASTQKLLARGERLTELLKQPQYAPQAVEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+  + +  FE E LA + S  + LL+ I+ +  + +D +  LK+V+ +F A F
Sbjct: 451 RGYLDKIPTSSVRRFESELLARLHSQHKDLLDGIRTKKALDKDLENTLKSVLDSFSATF 509


>gi|406705622|ref|YP_006755975.1| ATP synthase F1 subcomplex subunit alpha [alpha proteobacterium
           HIMB5]
 gi|406651398|gb|AFS46798.1| ATP synthase F1 subcomplex alpha subunit [alpha proteobacterium
           HIMB5]
          Length = 510

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 84/112 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYRE+AAFAQFGSDLDA+TQQLLNRG +LTELLKQ QY PM + EQV  ++CGV
Sbjct: 391 MKLELAQYREMAAFAQFGSDLDASTQQLLNRGSKLTELLKQKQYSPMTVAEQVISVFCGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
           +G+LD ++   I  FE + +   KS +  ++ESI+  GK+ EDT+  L  +V
Sbjct: 451 KGYLDDIELKDIANFETKIIEKCKSDKPEIIESIQSSGKLEEDTEKLLVDLV 502


>gi|261315846|ref|ZP_05955043.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M163/99/10]
 gi|261304872|gb|EEY08369.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M163/99/10]
          Length = 500

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 84/110 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKT 110
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK 
Sbjct: 450 NGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKA 499


>gi|90418837|ref|ZP_01226748.1| ATP synthase F1, alpha subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336917|gb|EAS50622.1| ATP synthase F1, alpha subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 509

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDKL   ++  FE+  L  ++S  + +L+ I  E  +++D  AKLK+ + +F  NF
Sbjct: 450 QGYLDKLRVDQVGEFEEGLLNSLRSEHKAVLDQIATEKALSDDLRAKLKSAIDSFAKNF 508


>gi|398827804|ref|ZP_10586007.1| proton translocating ATP synthase, F1 alpha subunit
           [Phyllobacterium sp. YR531]
 gi|398219102|gb|EJN05599.1| proton translocating ATP synthase, F1 alpha subunit
           [Phyllobacterium sp. YR531]
          Length = 509

 Score =  134 bits (337), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K EL+QYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELSQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   ++  FE+  L  +++  + +L +I KE +I++DT  KLK  V  F   F
Sbjct: 450 NGYLDKLAVNQVGKFEQGLLTWLRTEHKDVLSTIAKEKQISDDTKGKLKAAVDAFAKTF 508


>gi|222087439|ref|YP_002545976.1| F0F1 ATP synthase subunit alpha [Agrobacterium radiobacter K84]
 gi|221724887|gb|ACM28043.1| ATP synthase F1, alpha subunit [Agrobacterium radiobacter K84]
          Length = 510

 Score =  134 bits (337), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKVEEQVAVIFAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+   +I  FE+  L++++S  + LL++I+ E  I++ T +KL   + ++  +F
Sbjct: 451 NGYLDKIAVPQIGKFEQGLLSYLRSEGKELLDTIRTEKAISDATKSKLTAALDSYAKSF 509


>gi|386800434|ref|YP_006280958.1| atp1 gene product (mitochondrion) [Helicosporidium sp. ex Simulium
           jonesi]
 gi|253807606|gb|ACT36184.1| ATP synthase F1 subunit alpha [Helicosporidium sp. ex Simulium
           jonesi]
          Length = 506

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 85/115 (73%), Gaps = 3/115 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQ LLNRG RLTE+LKQ QY PM+IE QV ++Y   
Sbjct: 393 MKLELAQYREVAAFAQFGSDLDASTQYLLNRGARLTEVLKQDQYSPMSIETQVVILYAAT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G+LDKL+ + I  FE   L +I SS   +LE IK   ++T+ ++AKLK   +N 
Sbjct: 453 KGYLDKLNISDIKKFEDTVLKNIDSS---ILEDIKNTRQLTDASNAKLKDFFSNL 504


>gi|407768753|ref|ZP_11116131.1| F0F1 ATP synthase subunit alpha [Thalassospira xiamenensis M-5 =
           DSM 17429]
 gi|407288437|gb|EKF13915.1| F0F1 ATP synthase subunit alpha [Thalassospira xiamenensis M-5 =
           DSM 17429]
          Length = 510

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+ AFAQF SDLD ATQ+LL RG RLTELLKQ QY P+ +EEQV VIY GV
Sbjct: 391 IKLELAQYREMEAFAQFASDLDPATQKLLARGARLTELLKQPQYSPLKVEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD ++  KI  FE++FL  I+S+   +L++I+ E  ++E T+ KLK  +  F   F
Sbjct: 451 KGYLDGVEVGKIRAFEEQFLNDIRSTGSDILDAIRTEKVLSEATETKLKAFLDKFAKTF 509


>gi|220927120|ref|YP_002502422.1| F0F1 ATP synthase subunit alpha [Methylobacterium nodulans ORS
           2060]
 gi|254808105|sp|B8IN03.1|ATPA_METNO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219951727|gb|ACL62119.1| ATP synthase F1, alpha subunit [Methylobacterium nodulans ORS 2060]
          Length = 509

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  FE   LA ++     LLE+I+    +++++ AKLK VV  F  +F
Sbjct: 450 NGYLDPIPVNRVRAFEDGLLATLRGKHADLLEAIRASKDLSDESAAKLKGVVEAFAKSF 508


>gi|359409182|ref|ZP_09201650.1| proton translocating ATP synthase, F1 alpha subunit [SAR116 cluster
           alpha proteobacterium HIMB100]
 gi|356675935|gb|EHI48288.1| proton translocating ATP synthase, F1 alpha subunit [SAR116 cluster
           alpha proteobacterium HIMB100]
          Length = 511

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 89/119 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SD+DA+T+QLL RG RLTELLKQ QY PM +EEQVAVI+ GV
Sbjct: 392 IKLELAQYREMAAFAQFASDMDASTRQLLERGARLTELLKQPQYSPMLVEEQVAVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +D A +  FE   L  ++ S + +L +I+K+  I+E TD +L  ++ ++  +F
Sbjct: 452 KGYLDGIDLADVGRFEAGLLDQLRGSGKKILAAIQKDKSISETTDKELHDLIGSYAKSF 510


>gi|393769068|ref|ZP_10357596.1| F0F1 ATP synthase subunit alpha [Methylobacterium sp. GXF4]
 gi|392725309|gb|EIZ82646.1| F0F1 ATP synthase subunit alpha [Methylobacterium sp. GXF4]
          Length = 511

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 86/112 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQQLLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQQLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
            G+LDKL  +KI  FE   L+ +++  + LL +I     +++++  KLK+VV
Sbjct: 451 NGYLDKLPVSKIRAFEDSLLSTLRTKHQDLLSAIATSKDLSDESAGKLKSVV 502


>gi|126274595|ref|XP_001387600.1| F1F0-ATPase complex, F1 alpha subunit [Scheffersomyces stipitis CBS
           6054]
 gi|126213470|gb|EAZ63577.1| F1F0-ATPase complex, F1 alpha subunit [Scheffersomyces stipitis CBS
           6054]
          Length = 545

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT+LLKQ QY P+A EEQV +I+ GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQYSPLAAEEQVPLIFAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD++   +I  FE+ FLAH+K++E  +LE+I+ +G+++++   KL++    F++ F
Sbjct: 487 NGFLDEIPLERIGEFEESFLAHLKANETEILEAIQVKGELSKELLEKLRSTTETFVSTF 545


>gi|254456379|ref|ZP_05069808.1| ATP synthase F1, alpha subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083381|gb|EDZ60807.1| ATP synthase F1, alpha subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 511

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYRE+AAFAQFGSDLDA+TQQLLNRG +LTELLKQ QY PM + EQV  ++CGV
Sbjct: 391 MKLELAQYREMAAFAQFGSDLDASTQQLLNRGSKLTELLKQKQYSPMTVAEQVISVFCGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD ++   I  FE + +   KS +  +++SI   GK+ +D +  L  V+T    NF
Sbjct: 451 KGYLDDIELKDIAEFENKIIEKCKSDKPEIIDSILASGKLEDDMENLLVEVITQLKENF 509


>gi|156845989|ref|XP_001645883.1| hypothetical protein Kpol_1045p9 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116553|gb|EDO18025.1| hypothetical protein Kpol_1045p9 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 544

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 426 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLAAEEQVPLIYAGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ +++  FE  FLA++KS+   +L +I+ +G++T++  A LK+   +F+A F
Sbjct: 486 NGYLDNVELSRVGEFEAAFLAYLKSNHLEILNTIRDKGELTKELLASLKSATESFVATF 544


>gi|336363900|gb|EGN92269.1| hypothetical protein SERLA73DRAFT_191389 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336381090|gb|EGO22242.1| alpha subunit of the F1 sector of mitochondrial F1F0 ATP
           synthase,ATP1 [Serpula lacrymans var. lacrymans S7.9]
          Length = 543

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY PM  E QV +IY GV
Sbjct: 424 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPMPTEIQVPIIYAGV 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF +H+ +++  LLE I   G +T + + K+K VV + +++FT
Sbjct: 484 NGLLDSIPVDQITRWEAEFRSHLTATQTALLEEISA-GNVTPEMEGKIKKVVEDHVSSFT 542


>gi|222150027|ref|YP_002550984.1| F0F1 ATP synthase subunit alpha [Agrobacterium vitis S4]
 gi|254807669|sp|B9JTR4.1|ATPA_AGRVS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221737009|gb|ACM37972.1| ATP synthase F1, alpha subunit [Agrobacterium vitis S4]
          Length = 508

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 389 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKVEEQVVVIFAGV 448

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL  + +  FE   L+++++  + +L++I+ E  I++D   KLK  +  F  +F 
Sbjct: 449 NGYLDKLAVSDVGRFEHGVLSYLRTEGKDILDAIRTEKAISDDVKGKLKAALDTFAKSFA 508


>gi|402223738|gb|EJU03802.1| ATP synthase F1 alpha subunit [Dacryopinax sp. DJM-731 SS1]
          Length = 535

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 89/119 (74%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 415 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGSRLTELLKQGQYQPLATEVQVPIIYAGV 474

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KIT +E EF  H+ +S+  LLE I K G  +++ +AK+K VVT+ ++ F
Sbjct: 475 NGLLDNVPVDKITQWETEFREHLATSQGPLLEEIAK-GAASDELEAKIKKVVTDHVSAF 532


>gi|398377036|ref|ZP_10535215.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           AP16]
 gi|397727237|gb|EJK87664.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           AP16]
          Length = 509

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKVEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+   +I  FE+  L++++S  + LL++I+ E  I++ T +KL   + ++  +F
Sbjct: 450 NGYLDKIAVPQIGKFEQGLLSYLRSEGKELLDTIRTEKAISDATKSKLVAALDSYAKSF 508


>gi|261884077|ref|ZP_06008116.1| F0F1 ATP synthase subunit alpha [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 170

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQ GSDLD ATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 51  IKGELAQYREMAAFAQCGSDLDXATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 110

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDKL   ++  FE+  LA +++  + +LE I+ E  +T+D  AKLK  +  F  +F 
Sbjct: 111 SGYLDKLAVNQVGKFEEGLLASLRTEHKDVLEGIRNEKALTDDLKAKLKAAIDAFAKSFV 170


>gi|297183582|gb|ADI19709.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 511

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG +LTELLKQ QY PM++ EQV  ++CGV
Sbjct: 391 IKLELAQYREMAAFAQFGSDLDASTQRLLNRGSKLTELLKQKQYSPMSVAEQVISVFCGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +D   I+ FE + L+   S    + ++I K GK+ E+T+  L  ++     NF
Sbjct: 451 KGYLDDIDLKNISEFENKILSKSNSENPEIFDTINKSGKLEEETEKTLIKLIEELKKNF 509


>gi|170747039|ref|YP_001753299.1| F0F1 ATP synthase subunit alpha [Methylobacterium radiotolerans JCM
           2831]
 gi|226739910|sp|B1LVH1.1|ATPA_METRJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|170653561|gb|ACB22616.1| ATP synthase F1, alpha subunit [Methylobacterium radiotolerans JCM
           2831]
          Length = 510

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 84/112 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQALLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
            G+LDKL   K+  FE   L+ ++S  + LL+SI     ++++   KLK+VV
Sbjct: 451 NGYLDKLPVTKVRAFEDSLLSTLRSKHKDLLDSIAASKDLSDENAGKLKSVV 502


>gi|405381042|ref|ZP_11034875.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF142]
 gi|397322510|gb|EJJ26915.1| proton translocating ATP synthase, F1 alpha subunit [Rhizobium sp.
           CF142]
          Length = 509

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   ++  FE+  L++++S    +L++I+ E  I++ T  KL   + +F  +F
Sbjct: 450 NGYLDKLPVTQVGKFEQGLLSYLRSEGSAILDAIRTEKAISDATKGKLTAALDSFAKSF 508


>gi|317121016|ref|YP_004101019.1| ATP synthase F1 subcomplex subunit alpha [Thermaerobacter
           marianensis DSM 12885]
 gi|315590996|gb|ADU50292.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 521

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG R+TE+LKQG++ PM +EEQV  IYCGV
Sbjct: 384 LRLDLAQYRELAAFAQFGSDLDKATQARLARGQRVTEILKQGEHEPMPVEEQVVAIYCGV 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  FE+EFL ++K     +LESI+ E +IT++ + +L++ +  F A F
Sbjct: 444 NGYLDDVPVERVREFEREFLQYLKRFNPEVLESIRTEKEITKENEQRLQSAIQQFKAGF 502


>gi|156849119|ref|XP_001647440.1| hypothetical protein Kpol_1018p115 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118126|gb|EDO19582.1| hypothetical protein Kpol_1018p115 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 546

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLAAEEQVPLIYAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD ++ +++  FE  FLA++KS+ + +L +I+ +G++ ++  A LKT   +F++ F
Sbjct: 488 NGYLDNVELSRVGEFEAAFLAYLKSNHQEILNTIRDKGELNKELLASLKTATESFVSTF 546


>gi|254419007|ref|ZP_05032731.1| ATP synthase F1, alpha subunit [Brevundimonas sp. BAL3]
 gi|196185184|gb|EDX80160.1| ATP synthase F1, alpha subunit [Brevundimonas sp. BAL3]
          Length = 510

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLDA+TQ+LL RG RLTELLKQ QY P+A+EEQV  +Y G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDASTQKLLARGARLTELLKQPQYSPLAMEEQVVSVYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +  + +  FEKE LA I ++   LLE I+ +  +T D +A+LK ++  F+  F
Sbjct: 451 RGYIDGIAVSDVGRFEKELLARIHANHASLLEGIRTKKDLTSDIEAELKDILAAFVKTF 509


>gi|320580588|gb|EFW94810.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Ogataea parapolymorpha DL-1]
          Length = 593

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L+RG RLT+LLKQ QY P A EEQV VIY GV
Sbjct: 475 LKLFLAQYREVAAFAQFGSDLDASTKQTLSRGERLTQLLKQKQYSPQASEEQVPVIYAGV 534

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +I  FE++F+A++K++E  +LE+I+ +G+++ +   KLK+    F+A F
Sbjct: 535 NGFLDNIPIERIQEFEEQFVAYLKANEGDILEAIRTKGELSSELLDKLKSATETFVATF 593


>gi|299745096|ref|XP_001831471.2| ATP synthase F1 [Coprinopsis cinerea okayama7#130]
 gi|298406431|gb|EAU90318.2| ATP synthase F1 [Coprinopsis cinerea okayama7#130]
          Length = 554

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 435 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLATEVQVPIIYAGV 494

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ S+++ LL  I  +G +  + +AK+K VV + +++FT
Sbjct: 495 NGLLDSIPVEQITRWEAEFRDHLTSTQQALLAEI-SQGNVNPELEAKIKKVVEDHVSSFT 553


>gi|296532594|ref|ZP_06895299.1| ATP synthase F1 sector alpha subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267085|gb|EFH13005.1| ATP synthase F1 sector alpha subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 511

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLDA+TQ LL RG RLTELLKQ Q+ P+ +EEQV  ++ GV
Sbjct: 391 IKLELAQYREMAAFAQFASDLDASTQALLARGARLTELLKQPQFKPVPVEEQVISLFAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD+++ +K+  FE + LA IK++   +L+S++ + +IT++ +AKL + + NF  +F
Sbjct: 451 RGYLDRIEVSKVGAFETQLLASIKANAPEILDSVRDKKEITKENEAKLVSFMDNFAKSF 509


>gi|430005398|emb|CCF21199.1| ATP synthase subunit alpha, membrane-bound, F1 sector [Rhizobium
           sp.]
          Length = 509

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+    +  FE+  L +++S  + +L++I+ E  +++D  AKLK  +  +  +F 
Sbjct: 450 NGYLDKIPVGDVGKFEQGLLTYMRSEGKDVLDAIRTEKALSDDVKAKLKAALDAYAKSFA 509


>gi|50261318|ref|YP_052891.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
 gi|48237631|gb|AAT40680.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
          Length = 509

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AF+QFGSDLDAATQQ L+RGVRLTE+LKQG  VP+ +E+Q+ +I+ GV
Sbjct: 388 MKLELAQFREVQAFSQFGSDLDAATQQQLHRGVRLTEMLKQGLNVPLNVEDQIVIIFLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK++  KI  FE  +L  IK++   +L  I  + +I+++ +AKL+T+  +F + F
Sbjct: 448 RGFLDKIEVKKIGQFENAWLQFIKNNHNDILVEIATKKEISKELEAKLRTLANDFTSQF 506


>gi|412986087|emb|CCO17287.1| ATP synthase subunit alpha, mitochondrial precursor [Bathycoccus
           prasinos]
          Length = 560

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE LKQGQY P+ ++ QV  IY   
Sbjct: 442 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEALKQGQYEPIPVQNQVVFIYAAT 501

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    I  FE   +  + +S   +LE+I+ EG I++ TDAKLK +   F   F
Sbjct: 502 KGYLDKVPVKDIGAFEAGLMKQVDAS---ILEAIRTEGVISDATDAKLKELCAKFTEGF 557


>gi|425765809|gb|EKV04457.1| ATP synthase subunit alpha [Penicillium digitatum PHI26]
 gi|425783898|gb|EKV21715.1| ATP synthase subunit alpha [Penicillium digitatum Pd1]
          Length = 554

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 434 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVTDMVPLIFAGV 493

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KI T+E + LAH+KSS   +  +I+KEG+++++T+A LK  ++ F + F 
Sbjct: 494 NGLLDTIPVEKILTWETDLLAHLKSSHPEIQATIEKEGQVSKETEAILKKTISAFNSTFN 553


>gi|306991976|pdb|3OEE|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991977|pdb|3OEE|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991978|pdb|3OEE|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991985|pdb|3OEE|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991986|pdb|3OEE|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991987|pdb|3OEE|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991994|pdb|3OEE|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991995|pdb|3OEE|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991996|pdb|3OEE|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
          Length = 510

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAA AQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 392 LKLFLAQYREVAASAQFGSDLDASTKQTLVRGERLTQLLKQNQYSPLATEEQVPLIYAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 452 NGHLDGIELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 510


>gi|410081403|ref|XP_003958281.1| hypothetical protein KAFR_0G01130 [Kazachstania africana CBS 2517]
 gi|372464869|emb|CCF59146.1| hypothetical protein KAFR_0G01130 [Kazachstania africana CBS 2517]
          Length = 543

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 425 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGERLTQLLKQPQYAPLSAEEQVPLIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   KI+ FE  FLA++KS+   +L SI+ +G++ ++    LK+   +F+A F
Sbjct: 485 NGYLDSIPLDKISEFETSFLAYLKSNHEDILSSIRDKGELPKNLLESLKSATESFVATF 543


>gi|354543776|emb|CCE40498.1| hypothetical protein CPAR2_105340 [Candida parapsilosis]
          Length = 547

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 91/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT++LKQ QY P+A EEQV VI+ GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQILKQKQYHPLAAEEQVPVIFAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE+ F+AH+KS    LL+SI+++G+++++   +L  +  +F++NF 
Sbjct: 488 NGYLDDLPVNKVGEFEEAFVAHLKSDYSDLLKSIQEKGELSKEQLDQLHKITKDFVSNFN 547


>gi|328862967|gb|EGG12067.1| hypothetical protein MELLADRAFT_41776 [Melampsora larici-populina
           98AG31]
          Length = 550

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYR+VAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV ++Y GV
Sbjct: 431 LKLYLAQYRDVAAFAQFGSDLDASTRYLLSRGARLTELLKQGQYQPLAFEVQVPILYAGV 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   KI  ++  F  H+ + +  LL+ I   GK+T + +AK+K+VV +F +NF
Sbjct: 491 NGMLDKVPVEKIVAWDLAFRDHLTTEQSALLKDITG-GKMTPEIEAKIKSVVKSFTSNF 548


>gi|11466531|ref|NP_044780.1| ATP synthase F1 subunit alpha (mitochondrion) [Reclinomonas
           americana]
 gi|2258361|gb|AAD11895.1| ATP synthase F1 subunit alpha (mitochondrion) [Reclinomonas
           americana]
          Length = 512

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 89/121 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYREVAAFAQFGSDLDAAT   LNRG RLTELLKQ QY P+  E Q+ ++Y GV
Sbjct: 392 LKLDLAQYREVAAFAQFGSDLDAATLSQLNRGERLTELLKQAQYSPIPTEIQIVILYAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+L+K+  +KI  +EK  +  I+++   +L+ IK E ++++D DA++  +V+ F  +F 
Sbjct: 452 RGYLNKISVSKIGEYEKGLINFIQTNHADILKRIKDERQLSKDLDAQIGNIVSTFTNSFV 511

Query: 121 G 121
           G
Sbjct: 512 G 512


>gi|393240423|gb|EJD47949.1| ATP synthase F1, alpha subunit [Auricularia delicata TFB-10046 SS5]
          Length = 537

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+  E QV +IY GV
Sbjct: 416 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLPTEVQVPIIYAGV 475

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   +ITT+E +F  H+  S++ LLE I   G ++ +T+A++K VV   +++F
Sbjct: 476 NGLLDSVPVDQITTWEADFRTHLTGSQQALLEKI-SSGNVSPETEAEIKKVVEAHVSSF 533


>gi|67537828|ref|XP_662688.1| hypothetical protein AN5084.2 [Aspergillus nidulans FGSC A4]
 gi|40740989|gb|EAA60179.1| hypothetical protein AN5084.2 [Aspergillus nidulans FGSC A4]
          Length = 668

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAF+QFGSDLDAAT+Q L RG  LTELLKQ QY PMA+ E V ++Y G+
Sbjct: 549 LKLYLAQYREIAAFSQFGSDLDAATKQTLRRGEHLTELLKQKQYAPMAVNEMVPLLYAGI 608

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++   +I ++E + LAH KS E  +L  I+K+GK++ D +A++K ++  F A F
Sbjct: 609 NGLIDRIPIGQIQSWEADVLAHFKSYEPEVLAQIEKDGKLSHDLEARIKEIIIAFNAAF 667


>gi|262186747|ref|YP_003276006.1| ATP synthase F1 subunit alpha (mitochondrion) [Pleurozia purpurea]
 gi|237780744|gb|ACR19390.1| ATP synthase F1 subunit alpha [Pleurozia purpurea]
          Length = 513

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 392 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEILKQPQYSPIPIEKQIVVIYAAV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++    IT +E+E L   KS + G+L +I ++  ITE   ++L T    F  +F
Sbjct: 452 KGYLDQIPVVLITHYEQELL---KSIDPGILSAIVQQKNITEQISSQLATFCQKFTQSF 507


>gi|444323273|ref|XP_004182277.1| hypothetical protein TBLA_0I00990 [Tetrapisispora blattae CBS 6284]
 gi|387515324|emb|CCH62758.1| hypothetical protein TBLA_0I00990 [Tetrapisispora blattae CBS 6284]
          Length = 573

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV +IY GV
Sbjct: 455 LKLFLAQYREVAAFAQFGSDLDASTKQTLTRGERLTQLLKQPQYSPLSAEEQVPLIYAGV 514

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD ++ ++I  FE  FL ++K+    +L SIK++G ++++  A LKT   +F+A F
Sbjct: 515 NGFLDNIELSRIAEFEAAFLPYLKADYPEILNSIKEKGVLSDELMASLKTATESFVATF 573


>gi|148553545|ref|YP_001261127.1| F0F1 ATP synthase subunit alpha [Sphingomonas wittichii RW1]
 gi|166201681|sp|A5V3X3.1|ATPA_SPHWW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148498735|gb|ABQ66989.1| ATP synthase F1, alpha subunit [Sphingomonas wittichii RW1]
          Length = 509

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVA I+ GV
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFQPLPFEEQVASIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T FE  FLA ++S    +L +I+    ++ D+ A LK+ +  F+  F
Sbjct: 450 NGYLDSIPTNAVTRFEAGFLAEMRSKHADVLAAIRDSKDLSADSTAALKSALEAFVKTF 508


>gi|353526632|ref|YP_004927700.1| ATP synthase F1 subunit alpha (mitochondrion) [Treubia lacunosa]
 gi|336089558|gb|AEH99747.1| ATP synthase F1 subunit alpha [Treubia lacunosa]
          Length = 513

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 392 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEILKQPQYSPIPIEKQIVVIYAAV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++    IT +E+E L   KS + G+L +I ++  ITE   ++L T    F  +F
Sbjct: 452 KGYLDQIPVVLITHYEQELL---KSIDPGILSAIVQQKNITEQISSQLATFCQKFTQSF 507


>gi|431806525|ref|YP_007233426.1| ATP synthase subunit alpha [Liberibacter crescens BT-1]
 gi|430800500|gb|AGA65171.1| ATP synthase alpha chain [Liberibacter crescens BT-1]
          Length = 509

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+A+F+QFGS+LD ATQ+LL+RG RLTELLKQ Q+ P  IEEQV V++ G+
Sbjct: 390 IKGELAQYREIASFSQFGSNLDVATQRLLSRGQRLTELLKQPQFSPFKIEEQVVVMFAGI 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+D ++I  FE E L+++K +   +L+SI  +  I++D D KLKT++  FL  F
Sbjct: 450 NGYLDKIDLSQIGRFETELLSYLKITYGDVLKSIADDKVISKDLDTKLKTIIDEFLKIF 508


>gi|398821692|ref|ZP_10580126.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. YR681]
 gi|398227646|gb|EJN13834.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. YR681]
          Length = 509

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L SI+    +T+DT AKLK+VV  F  +F
Sbjct: 450 NGYLDPLPVNKVRAFEDGLLSLLRGKNAEILNSIRDTRDLTDDTAAKLKSVVEGFAKSF 508


>gi|338707921|ref|YP_004662122.1| ATP synthase F1 subunit alpha [Zymomonas mobilis subsp. pomaceae
           ATCC 29192]
 gi|336294725|gb|AEI37832.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. pomaceae
           ATCC 29192]
          Length = 509

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQV  ++ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGKRLTELLKQPQFHPMPFEEQVVSLFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D ++   +  +E+  L +++SS   LL +I+  G  T+DT  KLK  + NF   F
Sbjct: 450 NGYIDGIEVTDVNRYEEALLNYVRSSHNDLLATIRDTGDFTDDTKTKLKAALDNFAKIF 508


>gi|406990225|gb|EKE09904.1| hypothetical protein ACD_16C00100G0066 [uncultured bacterium]
          Length = 509

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LLNRG RLTELLKQ QY PM +E+QV  I+ GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDVATQKLLNRGSRLTELLKQSQYSPMPVEDQVISIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD+L    ++ FE+  L  I   +  L+ESI+KE  ++E T+  L     NF+  FT
Sbjct: 450 KGYLDELPVHDVSRFEQAALGAIHHEQPKLVESIRKEKALSEKTEENLHAFFKNFVKIFT 509


>gi|110635545|ref|YP_675753.1| F0F1 ATP synthase subunit alpha [Chelativorans sp. BNC1]
 gi|118573481|sp|Q11DD7.1|ATPA_MESSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110286529|gb|ABG64588.1| ATP synthase F1 subcomplex alpha subunit [Chelativorans sp. BNC1]
          Length = 509

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L    +  FE+  L H++S  + +L++I+ E  +++D  AKLK  +  +  NF+
Sbjct: 450 NGYLDALALRDVGRFEQGLLTHMRSEGKEILDAIRVEKALSDDLRAKLKAEIDAYAKNFS 509


>gi|383768673|ref|YP_005447736.1| ATP synthase subunit alpha [Bradyrhizobium sp. S23321]
 gi|381356794|dbj|BAL73624.1| ATP synthase subunit alpha [Bradyrhizobium sp. S23321]
          Length = 509

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFAPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L SI+    +T+DT AKLK+VV  F   F
Sbjct: 450 NGYLDPLPINKVRAFEDGLLSLLRGKNVEILNSIRDTRDLTDDTAAKLKSVVEGFAKGF 508


>gi|328775181|gb|AEB39986.1| ATP synthase F1 subunit alpha [Funaria hygrometrica]
          Length = 135

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P++IE+Q+ VIY  V
Sbjct: 14  LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQYSPISIEKQIVVIYAAV 73

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++  + I  +E E L   KS +  LL +I ++  ITE  +++L T    F  +F
Sbjct: 74  KGYLDQIPISSINQYEHELL---KSIDPDLLSAIVQQKNITEQINSQLATFCQKFTQSF 129


>gi|406603934|emb|CCH44567.1| F-type H+-transporting ATPase subunit alpha [Wickerhamomyces
           ciferrii]
          Length = 548

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV +IY GV
Sbjct: 430 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQKQYSPLAAEEQVPLIYAGV 489

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD++   +I  FE EFLA +K++   +L++I+++G+++++   KLK+    F+A F
Sbjct: 490 NGFLDQVALERIGEFETEFLATLKANNTDILDAIREKGQLSDELLGKLKSATEQFVATF 548


>gi|38638271|ref|NP_943682.1| ATP synthase F1 subunit alpha [Chara vulgaris]
 gi|32966585|gb|AAP92168.1| ATP synthase F1 subunit alpha [Chara vulgaris]
          Length = 516

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 7/120 (5%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P++IE+QV VIY  V
Sbjct: 395 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQYSPISIEKQVVVIYAAV 454

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD++  ++I  +E+E L  I  S   LL +I ++  ITE  D++L     NF   FT
Sbjct: 455 KGYLDQIQISQILKYEQELLKSIDPS---LLSAIAQQKTITEQIDSQL----ANFCQKFT 507


>gi|159045476|ref|YP_001534270.1| F0F1 ATP synthase subunit alpha [Dinoroseobacter shibae DFL 12]
 gi|190358154|sp|A8LJR6.1|ATPA2_DINSH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|157913236|gb|ABV94669.1| ATP synthase subunit alpha [Dinoroseobacter shibae DFL 12]
          Length = 512

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  +EK  LAH++   +GLL+ I KE  KI  + + K++  +  F A F
Sbjct: 452 KGYLDKIPVGDVGRYEKGLLAHLRGKHKGLLDYITKEDPKIKGEAEDKIRAALDEFAATF 511


>gi|389745484|gb|EIM86665.1| ATP synthase F1 alpha subunit [Stereum hirsutum FP-91666 SS1]
          Length = 541

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL RG RLTELLKQGQY PM++E QV +IY GV
Sbjct: 422 LKLYLAQYREVAAFAQFGSDLDASTRFLLARGARLTELLKQGQYQPMSMEIQVPIIYAGV 481

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   KITT+E EF  H+ + +  LLE+I   G +  D + K+K VV   ++ F 
Sbjct: 482 NGLLDSIPVDKITTWEAEFREHLTTQQVALLETIAT-GNVAGDVEEKIKKVVEEHVSQFN 540


>gi|153008437|ref|YP_001369652.1| F0F1 ATP synthase subunit alpha [Ochrobactrum anthropi ATCC 49188]
 gi|166201671|sp|A6WXW9.1|ATPA_OCHA4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151560325|gb|ABS13823.1| ATP synthase F1, alpha subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 509

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+   ++  FE   L+ +++  + +L++I+ E  +T++  AKLK  V  F  +F 
Sbjct: 450 NGYLDKIAVNQVGKFEAGLLSSLRTEHKDVLDAIRDEKALTDNIKAKLKAAVDAFAKSFA 509


>gi|299830473|ref|YP_003734844.1| ATP synthase F1 subunit alpha [Pythium ultimum]
 gi|269810850|gb|ACZ43879.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ L+RGVRLTE+LKQ   +P+A+E+QV +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLHRGVRLTEMLKQDLNIPLAVEDQVVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI TFE  +L  IK++   +L  I  + +++++ + KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKIATFETNWLNFIKNNHSDILNEILTKKELSKELNQKLNTLAGDFTKNF 506


>gi|449547876|gb|EMD38843.1| hypothetical protein CERSUDRAFT_112572 [Ceriporiopsis subvermispora
           B]
          Length = 544

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A+E QV +IY GV
Sbjct: 425 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLAMEVQVPIIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ S++  LL+ I   G IT + +A++K VV + ++ FT
Sbjct: 485 NGLLDSIPVDQITRWEAEFRQHLSSAQGELLKVIST-GNITPEIEAQIKKVVEDHVSAFT 543


>gi|302685682|ref|XP_003032521.1| hypothetical protein SCHCODRAFT_75760 [Schizophyllum commune H4-8]
 gi|300106215|gb|EFI97618.1| hypothetical protein SCHCODRAFT_75760 [Schizophyllum commune H4-8]
          Length = 528

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+  E QV +IY GV
Sbjct: 408 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLPTEIQVPIIYAGV 467

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ S++  LLE I   G+IT + + K+K VV + +++FT
Sbjct: 468 NGLLDSIPVDQITKWEGEFRQHLTSTQGPLLEEIAT-GQITPELEGKIKKVVEDHVSSFT 526


>gi|410584289|ref|ZP_11321394.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|410505151|gb|EKP94661.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 521

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG R+TE+LKQG++ PM +EEQV  IYCGV
Sbjct: 384 LRLDLAQYRELAAFAQFGSDLDKATQARLARGQRVTEILKQGEHQPMPVEEQVVAIYCGV 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  FE+EFL ++K     +LESI+ + +IT++ + +L+  +  F A F
Sbjct: 444 NGYLDDVPVERVREFEREFLQYLKRFNPEVLESIRTQKEITKENEQRLQAAIQQFKAGF 502


>gi|385153416|ref|YP_006073018.1| atp1 gene product (mitochondrion) [Nitella hyalina]
 gi|335354147|gb|AEH42834.1| ATP synthase F1 subunit alpha (mitochondrion) [Nitella hyalina]
          Length = 513

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 87/120 (72%), Gaps = 7/120 (5%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P++IE+QV VIY  V
Sbjct: 392 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQYSPISIEKQVVVIYAAV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD++  ++I  +E+E L  I  S   LL +I ++  ITE  D++L     NF   FT
Sbjct: 452 KGYLDQIKISQILKYEQELLKSIDPS---LLSAIAQQKTITEQIDSQL----ANFCQKFT 504


>gi|448088380|ref|XP_004196532.1| Piso0_003754 [Millerozyma farinosa CBS 7064]
 gi|448092518|ref|XP_004197563.1| Piso0_003754 [Millerozyma farinosa CBS 7064]
 gi|359377954|emb|CCE84213.1| Piso0_003754 [Millerozyma farinosa CBS 7064]
 gi|359378985|emb|CCE83182.1| Piso0_003754 [Millerozyma farinosa CBS 7064]
          Length = 544

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT LLKQ Q  PMA EE V +I+ GV
Sbjct: 426 LKLFLAQYREVAAFAQFGSDLDASTKQTLNRGERLTNLLKQKQSSPMAAEEMVPIIFAGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD++   ++  FE+ +L+H+KS+E  L+E+++++G+ +++   KL++V  +F A+F
Sbjct: 486 NGFLDEIAVDRLAEFEESYLSHLKSNEPDLIEAVREKGEFSKEQLDKLRSVTESFAASF 544


>gi|295687680|ref|YP_003591373.1| ATP synthase F1 subunit alpha [Caulobacter segnis ATCC 21756]
 gi|295429583|gb|ADG08755.1| ATP synthase F1, alpha subunit [Caulobacter segnis ATCC 21756]
          Length = 510

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLDA+TQ++L RG RLTELLKQ QY P A+EEQV VIY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDASTQKMLARGERLTELLKQPQYAPQAVEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+  + +  FE E LA + S  + LL+ I+ +  + +D +  LK+ + +F A F
Sbjct: 451 RGYLDKIPTSAVRRFETELLARLHSQHKDLLDGIRTKKALDKDLENTLKSALDSFSATF 509


>gi|392381405|ref|YP_005030602.1| ATP synthase, F1 sector, alpha subunit [Azospirillum brasilense
           Sp245]
 gi|356876370|emb|CCC97135.1| ATP synthase, F1 sector, alpha subunit [Azospirillum brasilense
           Sp245]
          Length = 509

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K+ELAQYRE+AAFAQF SDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQV  I+ GV
Sbjct: 390 IKMELAQYREMAAFAQFASDLDAATQRLLARGARLTELLKQPQFQPLPVEEQVVSIFSGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  FE++FLA ++S    +L +I+ E +IT  T+ +LK  + NF   F
Sbjct: 450 KGYLDKIKVEDVNRFEQKFLAEVRSKGADILATIRNEKQITSATEERLKAFLDNFSKVF 508


>gi|414164331|ref|ZP_11420578.1| ATP synthase subunit alpha [Afipia felis ATCC 53690]
 gi|410882111|gb|EKS29951.1| ATP synthase subunit alpha [Afipia felis ATCC 53690]
          Length = 510

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK+VV  F  +F
Sbjct: 451 NGYLDALPLNKVRAFEDGLLSLLRGKHVDLLNAIRDSKDLSDDSAAKLKSVVDGFAKSF 509


>gi|409040432|gb|EKM49919.1| hypothetical protein PHACADRAFT_264357 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 545

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A+E QV +IY GV
Sbjct: 425 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLAMEIQVPIIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ +++  LL  I  +G IT + +AK+K +V   +  FT
Sbjct: 485 NGLLDPIPVDQITKWEAEFREHLSATQGALLSEI-AQGNITPELEAKIKKIVEEHVGAFT 543


>gi|421595395|ref|ZP_16039444.1| F0F1 ATP synthase subunit alpha, partial [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404272497|gb|EJZ36128.1| F0F1 ATP synthase subunit alpha, partial [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 336

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 217 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 276

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE   L+ ++     +L SI+    +++DT AKLK+VV  F   F+
Sbjct: 277 NGYLDPLPLNKVRAFEDGLLSLLRGKHVDILNSIRDSRDLSDDTAAKLKSVVEGFAKGFS 336


>gi|186920113|ref|YP_001874767.1| ATP synthase F0 subunit 1 [Hemiselmis andersenii]
 gi|186461059|gb|ACC78221.1| ATP synthase F0 subunit 1 [Hemiselmis andersenii]
          Length = 490

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG +LTELLKQ Q+ P+ IEEQV V++ G+
Sbjct: 368 LKLELAQYREVAAFAQFGSDLDAATQHLLNRGSKLTELLKQSQFAPLTIEEQVFVLFAGI 427

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D   I +FE+  LA +       LE I+ E  I+ + + ++ + +  F+  F
Sbjct: 428 KGYLDKVDITLIRSFEEALLAQLHEKNASFLEKIRSEKAISPEFEKEVHSFMATFVEGF 486


>gi|299135449|ref|ZP_07028639.1| ATP synthase F1, alpha subunit [Afipia sp. 1NLS2]
 gi|298589857|gb|EFI50062.1| ATP synthase F1, alpha subunit [Afipia sp. 1NLS2]
          Length = 510

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK+VV  F  +F
Sbjct: 451 NGYLDALPLNKVRAFEDGLLSLLRGKHIDLLNAIRDSKDLSDDSAAKLKSVVDGFAKSF 509


>gi|259482031|tpe|CBF76119.1| TPA: hypothetical protein similar to ATP synthase alpha chain
           (Broad) [Aspergillus nidulans FGSC A4]
          Length = 561

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/119 (52%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAF+QFGSDLDAAT+Q L RG  LTELLKQ QY PMA+ E V ++Y G+
Sbjct: 442 LKLYLAQYREIAAFSQFGSDLDAATKQTLRRGEHLTELLKQKQYAPMAVNEMVPLLYAGI 501

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++   +I ++E + LAH KS E  +L  I+K+GK++ D +A++K ++  F A F
Sbjct: 502 NGLIDRIPIGQIQSWEADVLAHFKSYEPEVLAQIEKDGKLSHDLEARIKEIIIAFNAAF 560


>gi|146423660|ref|XP_001487756.1| ATP synthase alpha chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
 gi|146388877|gb|EDK37035.1| ATP synthase alpha chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 447

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P++ EEQV VIY GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQKQYSPLSAEEQVPVIYAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   ++  FE+ +++ +KS++  +LE+I+++G++++D   KLK+   +F+A+F
Sbjct: 389 NGFLDNIAVDRVGEFEEAYISSLKSNQPEILEAIREKGELSKDDLEKLKSATESFVASF 447


>gi|182677219|ref|YP_001831365.1| ATP synthase F1 subunit alpha [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633102|gb|ACB93876.1| ATP synthase F1, alpha subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 509

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LL RG RLTELLKQ Q+ P+ IEEQV VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQKLLARGSRLTELLKQPQFSPLKIEEQVCVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   +I  +E   LA ++++   LL++I+    +++D+ AKLK ++  +  NF+
Sbjct: 450 NGYLDALPVNRIRAYEDGLLALLRTAHADLLDTIRTSKDLSDDSAAKLKALIEGYSKNFS 509


>gi|338972364|ref|ZP_08627739.1| ATP synthase alpha chain [Bradyrhizobiaceae bacterium SG-6C]
 gi|414169211|ref|ZP_11425048.1| ATP synthase subunit alpha [Afipia clevelandensis ATCC 49720]
 gi|338234528|gb|EGP09643.1| ATP synthase alpha chain [Bradyrhizobiaceae bacterium SG-6C]
 gi|410885970|gb|EKS33783.1| ATP synthase subunit alpha [Afipia clevelandensis ATCC 49720]
          Length = 510

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+  FE   L+ ++     +L +I+    +++D  AKLK VV  F   F
Sbjct: 451 NGYLDALPVSKVRAFEDGLLSLLRGKHADILNAIRDSKDLSDDNAAKLKGVVEGFAKTF 509


>gi|27375553|ref|NP_767082.1| ATP synthase F0F1 subunit alpha [Bradyrhizobium japonicum USDA 110]
 gi|81740322|sp|Q89X72.1|ATPA_BRAJA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27348690|dbj|BAC45707.1| ATP synthase alpha chain [Bradyrhizobium japonicum USDA 110]
          Length = 509

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L SI+    +++DT AKLK+VV  F  +F
Sbjct: 450 NGYLDPLPVNKVRAFEDGLLSLLRGKNVEILNSIRDSRDLSDDTAAKLKSVVEGFAKSF 508


>gi|381167513|ref|ZP_09876720.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Phaeospirillum molischianum DSM 120]
 gi|380683267|emb|CCG41532.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Phaeospirillum molischianum DSM 120]
          Length = 509

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LLNRG RLTELLKQ Q+ P++ EE+V  IY GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDPATQKLLNRGARLTELLKQPQFSPLSTEEEVVSIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D  ++  FE   LA IK+    +L SI  + +I  +T+ KLK  +  F   F
Sbjct: 450 KGYLDKIDVRQVGRFEAGLLAEIKAKSPEILTSIAADKQIKAETEEKLKAAIVAFAKTF 508


>gi|385099739|ref|YP_006234272.1| atp1 gene product (mitochondrion) [Huperzia squarrosa]
 gi|359741345|gb|AEV55693.1| ATP synthase F1 subunit alpha (mitochondrion) [Huperzia squarrosa]
          Length = 514

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQYSPLPIEKQIVVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++  + I  +E+E L   KS + G+L +I ++  ITE  + +L T    F  +F
Sbjct: 453 KGYLDQIPISIINKYEQELL---KSIDPGILSAIVQQKSITEQINTQLATFCQRFTQSF 508


>gi|89070094|ref|ZP_01157424.1| ATP synthase subunit A [Oceanicola granulosus HTCC2516]
 gi|89044315|gb|EAR50458.1| ATP synthase subunit A [Oceanicola granulosus HTCC2516]
          Length = 512

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY GV
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G LDK+   K+  FE   L H++++ R +L+ I  E  KI  D + K+K+ +  F  +F
Sbjct: 452 NGFLDKIPVNKVGAFEAGLLKHLRTNRRDVLDFITNEDPKIKGDAEEKVKSAIQEFAKDF 511


>gi|149244882|ref|XP_001526984.1| ATP synthase alpha chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449378|gb|EDK43634.1| ATP synthase alpha chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 448

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 90/119 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT++LKQ QY P++ EEQV VI+ GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQILKQKQYHPLSAEEQVPVIFAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD+L   K+  FE+ F  H+KS+E  +L+SIK +G+++++   +L  +  +F+A F
Sbjct: 389 NGYLDELPVNKVGEFEEAFTQHLKSNESHILDSIKTKGELSKEELEQLHKITKDFVAGF 447


>gi|121719882|ref|XP_001276639.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           clavatus NRRL 1]
 gi|119404851|gb|EAW15213.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           clavatus NRRL 1]
          Length = 557

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLTELLKQ QY PMA+ + V +I+ GV
Sbjct: 437 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTELLKQKQYSPMAVSDMVPLIFAGV 496

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +   KI  +E +FLA +K+++  +L++I KEG+I+++ + K++  +  F A+F 
Sbjct: 497 NGYLDGIPVNKILQWESDFLASLKTNQPEILQTIDKEGQISKELETKIRETIEAFNASFN 556


>gi|365896819|ref|ZP_09434872.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
 gi|365422407|emb|CCE07414.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3843]
          Length = 509

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE+  L+ ++     LL +I+    +++D+ +KLK VV  +  NF
Sbjct: 450 NGYLDALPVNKVGAFEQGLLSTLRGKHTDLLNAIRDSRDLSDDSASKLKAVVEAYAKNF 508


>gi|269812163|gb|ACZ44461.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQ+REV AFAQFGSDLDA TQQ L+RGVRLTE+LKQ   +P+A+E+QV +IY GV
Sbjct: 388 MKLELAQFREVQAFAQFGSDLDATTQQQLHRGVRLTEMLKQDLNMPLAVEDQVVIIYLGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LDK+   KI TFE  +L  IK++   +L  I  + +++++ + KL T+  +F  NF
Sbjct: 448 RGFLDKIAVDKIATFETNWLNFIKNNHSDILNEILTKKELSKELNQKLNTLAGDFTKNF 506


>gi|162134229|gb|ABX82550.1| ATP synthase F1 subunit alpha [Trebouxia aggregata]
          Length = 509

 Score =  130 bits (327), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQGQ+ PM IE+QV V+Y   
Sbjct: 390 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEMLKQGQFQPMVIEKQVVVVYAAT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK++ + I +FE++ L  I      +L++I ++  I++  + KLKT    F   F
Sbjct: 450 KGYLDKMNVSDIESFEQKLLKEIDPE---ILKTISEQRTISDSLNQKLKTFFDGFTEKF 505


>gi|395785129|ref|ZP_10464862.1| ATP synthase subunit alpha [Bartonella tamiae Th239]
 gi|423717971|ref|ZP_17692161.1| ATP synthase subunit alpha [Bartonella tamiae Th307]
 gi|395425316|gb|EJF91485.1| ATP synthase subunit alpha [Bartonella tamiae Th239]
 gi|395426404|gb|EJF92531.1| ATP synthase subunit alpha [Bartonella tamiae Th307]
          Length = 509

 Score =  130 bits (327), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   ++  FE+  L  +++  + +LE I+ + +IT++   KL +V+  +  NF+
Sbjct: 450 NGYLDPLAVHQVGQFEQGLLTLLRTDHKDILEGIRDQKQITDEIKTKLTSVLQTYAKNFS 509


>gi|16127679|ref|NP_422243.1| ATP synthase F0F1 subunit alpha [Caulobacter crescentus CB15]
 gi|221236498|ref|YP_002518935.1| F0F1 ATP synthase subunit alpha [Caulobacter crescentus NA1000]
 gi|81620921|sp|Q9A2V7.1|ATPA_CAUCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807686|sp|B8H5I2.1|ATPA_CAUCN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13425167|gb|AAK25411.1| ATP synthase F1, alpha subunit [Caulobacter crescentus CB15]
 gi|220965671|gb|ACL97027.1| ATP synthase alpha chain [Caulobacter crescentus NA1000]
          Length = 510

 Score =  130 bits (327), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLDA+TQ++L RG RLTELLKQ QY P+++EEQV VIY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD +  + +  FE EFLA + S    LLE I+ +  + +D +  LK+ + +F + F
Sbjct: 451 RGYLDGIPTSSVRRFEAEFLARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSSTF 509


>gi|329890941|ref|ZP_08269284.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta ATCC 11568]
 gi|328846242|gb|EGF95806.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta ATCC 11568]
          Length = 510

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLD +TQ+LL RG RLTELLKQ QY P+A+EEQV  IY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDVSTQRLLARGARLTELLKQPQYSPLAVEEQVVSIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD ++ A++  FE E LA I ++   LL+ I+ +  +T + +A+LK ++  F   F
Sbjct: 451 RGYLDGIEVAQVGRFESELLARIHANHASLLDGIRTKKALTPELEAELKDILAAFAKTF 509


>gi|115522310|ref|YP_779221.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisA53]
 gi|122297997|sp|Q07UZ3.1|ATPA_RHOP5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115516257|gb|ABJ04241.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisA53]
          Length = 510

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  AK+  FE   L+ ++     +L +I+    +++DT  KLK VV  +   F
Sbjct: 451 NGYLDPLPVAKVRAFEDGLLSLLRGKNVEILNAIRDSRDLSDDTAGKLKAVVEAYAKTF 509


>gi|426196527|gb|EKV46455.1| P1 alpha subunit of the F1 sector of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. bisporus H97]
          Length = 538

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 419 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLATEMQVPIIYAGV 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ +++  LL  I   G +T + +AK+K  V + +++FT
Sbjct: 479 NGLLDSIPVDQITKWEAEFREHLTATQSALLSEIAT-GAVTPELEAKIKKAVEDHVSSFT 537


>gi|374572041|ref|ZP_09645137.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. WSM471]
 gi|374420362|gb|EHQ99894.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. WSM471]
          Length = 509

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFAPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L +I+    +++DT AKLK+VV  F  +F
Sbjct: 450 NGYLDPLPVNKVRAFEDGLLSLLRGKNVEILNAIRDSRDLSDDTAAKLKSVVEGFAKSF 508


>gi|254584402|ref|XP_002497769.1| ZYRO0F13068p [Zygosaccharomyces rouxii]
 gi|238940662|emb|CAR28836.1| ZYRO0F13068p [Zygosaccharomyces rouxii]
          Length = 549

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLD +T+Q L RG RLT+LLKQ QY P+ +EE V VIY G 
Sbjct: 431 LKLFLAQYREVAAFAQFGSDLDPSTKQTLVRGERLTQLLKQAQYAPLGVEEMVLVIYAGT 490

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D ++  ++  FE+ FL+ +K++   LL SI++ G++ ++  AK+K+V  +F+A F
Sbjct: 491 NGYIDNVEVNRVNEFEQAFLSFVKTNHNDLLTSIRERGELDDELLAKMKSVTESFVATF 549


>gi|409081292|gb|EKM81651.1| ATP1 alpha subunit of the F1 sector of mitochondrial F1F0 ATP
           synthase [Agaricus bisporus var. burnettii JB137-S8]
          Length = 538

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 419 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLATEMQVPIIYAGV 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ +++  LL  I   G +T + +AK+K  V + +++FT
Sbjct: 479 NGLLDSIPVDQITKWEAEFREHLTATQSALLSEIAT-GAVTPELEAKIKKAVEDHVSSFT 537


>gi|384214130|ref|YP_005605293.1| ATP synthase subunit alpha [Bradyrhizobium japonicum USDA 6]
 gi|354953026|dbj|BAL05705.1| ATP synthase alpha chain [Bradyrhizobium japonicum USDA 6]
          Length = 509

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFAPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L +I+    +++DT AKLK+VV  F  +F
Sbjct: 450 NGYLDPLPLNKVRAFEDGLLSLLRGKNAEILNAIRDSRDLSDDTAAKLKSVVEGFAKSF 508


>gi|395781334|ref|ZP_10461754.1| ATP synthase subunit alpha [Bartonella rattimassiliensis 15908]
 gi|395421448|gb|EJF87697.1| ATP synthase subunit alpha [Bartonella rattimassiliensis 15908]
          Length = 511

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L+ + +  FE+  L  ++S  + LL +I ++ +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDSLEVSDVARFEQGLLVLLRSDYQDLLNAIAEQKQITDELKDKLMTVLNTYAKNFS 511


>gi|395792799|ref|ZP_10472223.1| ATP synthase subunit alpha [Bartonella vinsonii subsp. arupensis
           Pm136co]
 gi|423713458|ref|ZP_17687718.1| ATP synthase subunit alpha [Bartonella vinsonii subsp. arupensis
           OK-94-513]
 gi|395423499|gb|EJF89694.1| ATP synthase subunit alpha [Bartonella vinsonii subsp. arupensis
           OK-94-513]
 gi|395432356|gb|EJF98345.1| ATP synthase subunit alpha [Bartonella vinsonii subsp. arupensis
           Pm136co]
          Length = 511

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + ++ FE+  L   +S  + LL++I  + +IT++   KL TV+ ++  NF+
Sbjct: 452 NGYLDSLAVSDVSRFEQGLLTLFRSDHQDLLKAIADQKQITDELKEKLNTVLKSYAKNFS 511


>gi|209965528|ref|YP_002298443.1| F0F1 ATP synthase subunit alpha [Rhodospirillum centenum SW]
 gi|209958994|gb|ACI99630.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW]
          Length = 509

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+AAFAQF SDLDA TQ+LLNRG RLTELLKQ Q+ PMA+EEQV  IY GV
Sbjct: 390 IKLELAQFREMAAFAQFASDLDATTQRLLNRGARLTELLKQPQFSPMAVEEQVVSIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  +E   L  ++ +   +L +I+ + +IT+DT+ KLK  + NF   F
Sbjct: 450 KGYLDKVKVEDVNRYEAHLLDVMRDNGADILAAIRTDKQITKDTEEKLKAFLENFGRTF 508


>gi|170086766|ref|XP_001874606.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649806|gb|EDR14047.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 540

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/120 (56%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A E QV +IY GV
Sbjct: 421 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLATEVQVPIIYAGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +   +IT +E EF  H+ +S+  LL  I   G +T + +AK+K VV + + +FT
Sbjct: 481 NGLLDSIAVDQITKWEAEFREHLATSQGPLLSEIAT-GVVTPELEAKIKKVVEDHVTSFT 539


>gi|395788016|ref|ZP_10467592.1| ATP synthase subunit alpha [Bartonella birtlesii LL-WM9]
 gi|395409798|gb|EJF76383.1| ATP synthase subunit alpha [Bartonella birtlesii LL-WM9]
          Length = 511

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 90/120 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  A +  FE+  L  ++S  + LL++I ++ ++T++   KL TV+ ++  NF+
Sbjct: 452 NGYLDSLAIADVARFEQGLLTLLRSDYQDLLKAIAEQKQLTDELKDKLLTVLKSYAKNFS 511


>gi|397621756|gb|EJK66451.1| hypothetical protein THAOC_12633 [Thalassiosira oceanica]
          Length = 509

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFA+FGSDLDAATQQ LNRGVRL ELLKQGQY P   EE VA ++ GV
Sbjct: 388 MKLELAQYREVAAFAKFGSDLDAATQQQLNRGVRLYELLKQGQYEPYEPEEVVASLFIGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
           +G+ D++D   +  FE+ FL H+K +   +L+ I   G  +TE  + KL  +  +F   F
Sbjct: 448 KGYCDRIDVEHVQAFEEAFLVHMKGAHASVLKEIVDSGYALTEGVEKKLHDIAEDFTNGF 507

Query: 120 T 120
           +
Sbjct: 508 S 508


>gi|353243067|emb|CCA74650.1| probable H+-transporting ATP synthase alpha chain, mitochondrial
           [Piriformospora indica DSM 11827]
          Length = 542

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+  E QV +I+ GV
Sbjct: 423 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYEPLPTEIQVPIIFAGV 482

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KIT +E+EF  H+ S++  LL+ I  EG I  + +A++K VVT+ ++ F
Sbjct: 483 NGLLDPIPVDKITKWEQEFRNHLTSTQGALLQKI-SEGVINPELEAEIKKVVTDHVSAF 540


>gi|255262420|ref|ZP_05341762.1| ATP synthase F1, alpha subunit [Thalassiobium sp. R2A62]
 gi|255104755|gb|EET47429.1| ATP synthase F1, alpha subunit [Thalassiobium sp. R2A62]
          Length = 511

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 391 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D  ++  FE   LAH++     +L+ I  E  KI  D + K+K+ +  F  +F
Sbjct: 451 KGYLDKVDVNRVGEFEAGLLAHLRGKHADVLDFITNEDPKIKGDAEDKIKSALDAFAKDF 510


>gi|154246021|ref|YP_001416979.1| F0F1 ATP synthase subunit alpha [Xanthobacter autotrophicus Py2]
 gi|226739957|sp|A7IH29.1|ATPA_XANP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154160106|gb|ABS67322.1| ATP synthase F1, alpha subunit [Xanthobacter autotrophicus Py2]
          Length = 509

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 390 IKGELAQYRELAAFAQFGSDLDASTQKLLNRGARLTELLKQSQFSPLKVEEQVAVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+  FE+  L  ++S    +LE+I+   +I++DT  KL   +  F  +F
Sbjct: 450 NGYLDPLPVSKVREFEQGLLLALRSQHPEILEAIRSSKEISKDTTEKLTKALDAFAKSF 508


>gi|333980761|ref|YP_004518706.1| ATP synthase subunit alpha [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333824242|gb|AEG16905.1| ATP synthase subunit alpha [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 509

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG R+ ELLKQ QY PMA+E+QV VIY GV
Sbjct: 386 LRLDLAQYRELAAFAQFGSDLDKATQARLIRGQRMVELLKQKQYAPMAVEDQVMVIYVGV 445

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE+EFL ++ +S   + E+I K G+++++T+ KLK  +  F   F 
Sbjct: 446 NGYLDDLPVDKVLPFEEEFLNYMHTSHPEVGEAIAKTGELSKETEEKLKAAIIEFKKGFV 505


>gi|397676851|ref|YP_006518389.1| ATP synthase subunit alpha [Zymomonas mobilis subsp. mobilis ATCC
           29191]
 gi|395397540|gb|AFN56867.1| ATP synthase subunit alpha [Zymomonas mobilis subsp. mobilis ATCC
           29191]
          Length = 509

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQV  ++ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGKRLTELLKQPQFHPMPFEEQVVSLFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D ++ A +  +E+  L++++SS   LL +I++ G  +++T +KL   + NF   F
Sbjct: 450 NGYIDGIEVADVNRYEEAMLSYMRSSHNDLLATIRETGDFSDETKSKLTAALDNFAKIF 508


>gi|217976535|ref|YP_002360682.1| ATP synthase F1 subunit alpha [Methylocella silvestris BL2]
 gi|254808106|sp|B8EQP9.1|ATPA_METSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217501911|gb|ACK49320.1| ATP synthase F1, alpha subunit [Methylocella silvestris BL2]
          Length = 509

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LL RG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLARGSRLTELLKQPQFAPLKMEEQVVVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  A++  FE   LA +++S   LLE+I+    +++ +   LK +V  +  NF
Sbjct: 450 NGYLDALPVARVRAFEDGLLALVRTSHGDLLETIRSSKDLSDASTQALKAIVETYAKNF 508


>gi|392572966|gb|EIW66109.1| hypothetical protein TREMEDRAFT_74870 [Tremella mesenterica DSM
           1558]
          Length = 542

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM  E    +IY GV
Sbjct: 423 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGSRLTELLKQPQYTPMPTEIMAPLIYAGV 482

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   KIT +EK F   +KS   GLLE +   G +T++ ++++KT++   +A+F
Sbjct: 483 NGMLDKVPVDKITAWEKSFTEQLKSQHTGLLEKLSG-GVLTKEIESEMKTIIEAHVADF 540


>gi|86136461|ref|ZP_01055040.1| ATP synthase subunit A [Roseobacter sp. MED193]
 gi|85827335|gb|EAQ47531.1| ATP synthase subunit A [Roseobacter sp. MED193]
          Length = 512

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/120 (55%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQAQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D   +  +E+  LAH++     LLE I  E  KI  D   K+K  +  F A+F
Sbjct: 452 QGYLDKIDVKAVGRYEEGMLAHLRGKHADLLEWISTEDPKIKGDAADKIKAALDEFAADF 511


>gi|71149406|gb|AAZ29198.1| ATP synthase subunit A [Pellia epiphylla]
          Length = 514

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ L NRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQYLSNRGARLTEILKQPQYSPIPIEKQIVVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++    IT +E+E L   KS + G+L +I ++  ITE   ++L T    F  +F
Sbjct: 453 KGYLDQIPVVLITHYEQELL---KSIDPGILSAIVQQKNITEQISSQLATFCQKFTQSF 508


>gi|385302679|gb|EIF46800.1| alpha subunit of the f1 sector of mitochondrial f1f0 atp synthase
           [Dekkera bruxellensis AWRI1499]
          Length = 546

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T++ L RG RLT+LLKQ QY P A+EE+V VIY GV
Sbjct: 428 LKLFLAQYREVAAFAQFGSDLDASTKKTLVRGERLTQLLKQKQYHPYAVEEEVPVIYAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK    ++  FE++FLA++K+   G+L +I++ G + +   A LK    +F+A F
Sbjct: 488 NGFLDKFPAERVPEFEEKFLAYLKAEHSGILSNIRENGALKDADFANLKKATEDFVATF 546


>gi|389878844|ref|YP_006372409.1| primosome assembly protein PriA [Tistrella mobilis KA081020-065]
 gi|388529628|gb|AFK54825.1| primosome assembly protein PriA [Tistrella mobilis KA081020-065]
          Length = 511

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQ+RE+ AFAQFGSDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 391 IKLDLAQFREMEAFAQFGSDLDAATQKLLARGARLTELLKQPQFSPLKMEEQVCVIFAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD +    I  FE+  LA ++   + +L++I  EGK++++ +AKL  VV      F
Sbjct: 451 RGYLDAIPVNSIGKFEQALLADLRGENKAILDAIATEGKLSDEVEAKLVAVVDRTAKTF 509


>gi|386399626|ref|ZP_10084404.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. WSM1253]
 gi|385740252|gb|EIG60448.1| proton translocating ATP synthase, F1 alpha subunit [Bradyrhizobium
           sp. WSM1253]
          Length = 509

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFAPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L +I+    +++D+ AKLK+VV  F  +F
Sbjct: 450 NGYLDPLPVNKVRAFEDGLLSLLRGKNVDILNAIRDSRDLSDDSAAKLKSVVEGFAKSF 508


>gi|23015477|ref|ZP_00055252.1| COG0056: F0F1-type ATP synthase, alpha subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 509

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ Q+ PMA EE+V  IY GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQPQFSPMATEEEVISIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D  ++  FE   L+ IKS    +L +I  E +I+  T+ KLK  +  F   F
Sbjct: 450 KGYLDKIDVRQVGRFESSLLSEIKSKAPEILSTIATEKQISAQTEEKLKAFLDAFSKTF 508


>gi|383819864|ref|ZP_09975128.1| F0F1 ATP synthase subunit alpha [Mycobacterium phlei RIVM601174]
 gi|383335991|gb|EID14403.1| F0F1 ATP synthase subunit alpha [Mycobacterium phlei RIVM601174]
          Length = 548

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L+RG RL ELLKQ QY PM +E+QV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPMPVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD +    +  FE EFL H+K+S  G+L  I+K  K++E+T+AKL  V+ +F   F
Sbjct: 453 KGHLDSVPVEDVQRFEAEFLEHVKASHAGILTDIRKTKKLSEETEAKLVEVINDFKKGF 511


>gi|16588616|gb|AAL26859.1| ATP synthase alpha subunit [Taeniopygia guttata]
          Length = 76

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/76 (80%), Positives = 67/76 (88%)

Query: 19 SDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKE 78
          SDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIY GVRGHLDKL+P+KIT FE  
Sbjct: 1  SDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYAGVRGHLDKLEPSKITKFESA 60

Query: 79 FLAHIKSSERGLLESI 94
          FLAH+ S  + +L +I
Sbjct: 61 FLAHVLSQHQDVLSTI 76


>gi|395791796|ref|ZP_10471252.1| ATP synthase subunit alpha [Bartonella alsatica IBS 382]
 gi|395408099|gb|EJF74719.1| ATP synthase subunit alpha [Bartonella alsatica IBS 382]
          Length = 511

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I  + +IT++   KL TV+ ++  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLTLLRSDHQNLLKAIADQKQITDELKDKLLTVLKSYAKNFS 511


>gi|302381244|ref|YP_003817067.1| ATP synthase F1 subunit alpha [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191872|gb|ADK99443.1| ATP synthase F1, alpha subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 511

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLD +TQQLL RG RLTELLKQ QY P+ +EEQV  +Y G 
Sbjct: 392 IKGELAQYREMAAFAKFGSDLDVSTQQLLARGARLTELLKQPQYSPLTVEEQVVSVYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK+  A I  FE E LA + S+ +  L++IK    +++D +A+LK  +  F   F 
Sbjct: 452 RGFLDKIAVADIGRFEAELLARMHSAHQSTLDAIKSTKALSKDLEAELKAAIEAFAKTFA 511


>gi|451942607|ref|YP_007463244.1| F0F1 ATP synthase subunit alpha [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901994|gb|AGF76456.1| F0F1 ATP synthase subunit alpha [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 511

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + ++ FE+  L   +S  + LL++I  + +IT++   KL TV+ ++  NF+
Sbjct: 452 NGYLDSLAVSDVSRFEQGLLTLFRSDHQDLLKAIADQKQITDELKEKLITVLKSYAKNFS 511


>gi|209883744|ref|YP_002287601.1| F0F1 ATP synthase subunit alpha [Oligotropha carboxidovorans OM5]
 gi|337742539|ref|YP_004634267.1| ATP synthase subunit alpha [Oligotropha carboxidovorans OM5]
 gi|386031504|ref|YP_005952279.1| ATP synthase subunit alpha [Oligotropha carboxidovorans OM4]
 gi|226739919|sp|B6JD06.1|ATPA_OLICO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|209871940|gb|ACI91736.1| ATP synthase F1, alpha subunit [Oligotropha carboxidovorans OM5]
 gi|336096570|gb|AEI04396.1| ATP synthase subunit alpha [Oligotropha carboxidovorans OM4]
 gi|336100203|gb|AEI08026.1| ATP synthase subunit alpha [Oligotropha carboxidovorans OM5]
          Length = 510

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L +I+    +++D  AKLK+VV  F+  F
Sbjct: 451 NGYLDALPLNKVRAFEDGLLSLLRGKHVDILNAIRDSRDLSDDNAAKLKSVVDGFVKTF 509


>gi|452965347|gb|EME70371.1| F0F1 ATP synthase subunit alpha [Magnetospirillum sp. SO-1]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ Q+ PMA EE+V  IY GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQPQFSPMATEEEVISIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D  ++  FE   L+ IKS    +L +I  E +I+  T+ KLK  +  F   F
Sbjct: 450 KGYLDKIDVRQVGRFESSLLSEIKSKAPDVLTAIATEKQISAQTEEKLKAFLDAFSKTF 508


>gi|300024904|ref|YP_003757515.1| ATP synthase F1 subunit alpha [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526725|gb|ADJ25194.1| ATP synthase F1, alpha subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQKLLARGARLTELLKQPQFSPLKMEEQVAVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +  A +  FE+  L+ ++ SE+ + E+I KE  ++ DT+ KL   +  F  +FT
Sbjct: 450 RGYLDSIPVAAVGKFEQGVLSGLR-SEKSIFEAIAKEKALSADTEKKLVEFLDKFSKSFT 508


>gi|456351995|dbj|BAM86440.1| F0F1 ATP synthase alpha subunit [Agromonas oligotrophica S58]
          Length = 510

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK VV  F   F
Sbjct: 451 NGYLDALPLGKVRAFEDGLLSLLRGKNVDLLNAIRDSKDLSDDSAAKLKAVVEGFAKTF 509


>gi|188580724|ref|YP_001924169.1| F0F1 ATP synthase subunit alpha [Methylobacterium populi BJ001]
 gi|226739909|sp|B1ZEE9.1|ATPA_METPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|179344222|gb|ACB79634.1| ATP synthase F1, alpha subunit [Methylobacterium populi BJ001]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKMEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   K+  FE + L  ++S  +  L+S++    +++     LK VV +   +F
Sbjct: 450 NGYLDKLPVNKVREFEDQLLGTLRSKHQDWLDSVRDSKDLSDANANTLKGVVESIAKSF 508


>gi|163869187|ref|YP_001610439.1| ATP synthase F0F1 subunit alpha [Bartonella tribocorum CIP 105476]
 gi|189081288|sp|A9IYX0.1|ATPA_BART1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161018886|emb|CAK02444.1| ATP synthase alpha chain [Bartonella tribocorum CIP 105476]
          Length = 511

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I ++ +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLVLLRSDYQDLLQAIAEQKQITDELKDKLITVLNTYAKNFS 511


>gi|357975599|ref|ZP_09139570.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. KC8]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQVA I+ GV
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFSPMPFEEQVASIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D +  A +  FE   LA +++    +L  I+    + +D  AKL   +  F+  F
Sbjct: 450 NGYIDAIPAADVVRFESALLADLRAKHADVLAGIRDTKDLGDDLKAKLADAIAAFVKTF 508


>gi|91208868|ref|YP_539029.1| ATP synthase F1 subunit alpha [Physcomitrella patens]
 gi|90991408|dbj|BAE93100.1| ATP synthase F1 subunit alpha (mitochondrion) [Physcomitrella
           patens]
          Length = 518

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P++IE+Q+ VIY  V
Sbjct: 397 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQYSPISIEKQIVVIYAAV 456

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++  + I  +E E L   KS +  +L +I ++  ITE  +++L T    F  +F
Sbjct: 457 KGYLDQIPISSINQYEHELL---KSIDPDILSAIVQQKNITEQINSQLATFCQKFTQSF 512


>gi|83313240|ref|YP_423504.1| F0F1 ATP synthase subunit alpha [Magnetospirillum magneticum AMB-1]
 gi|115312250|sp|Q2VZN0.1|ATPA_MAGSA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|82948081|dbj|BAE52945.1| F0F1-type ATP synthase, alpha subunit [Magnetospirillum magneticum
           AMB-1]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/119 (55%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ Q+ PMA EE+V  IY GV
Sbjct: 390 IKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQPQFSPMATEEEVISIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+D  ++  FE   L+ IKS    +L +I  E +I+  T+ KLK  +  F   F
Sbjct: 450 KGYLDKIDVRQVGRFESSLLSEIKSKAPEILTAIATEKQISAQTEEKLKAFLDAFSKTF 508


>gi|291286801|ref|YP_003503617.1| ATP synthase F1 subunit alpha [Denitrovibrio acetiphilus DSM 12809]
 gi|290883961|gb|ADD67661.1| ATP synthase F1, alpha subunit [Denitrovibrio acetiphilus DSM
           12809]
          Length = 502

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L LAQYRE+AAF+QFGSDLDAATQ  L RG +L E+LKQGQY P+ +EEQV +I+ GV
Sbjct: 382 LRLNLAQYRELAAFSQFGSDLDAATQAQLRRGAKLVEILKQGQYKPVKVEEQVVIIFAGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD ++ + +  FE EF+A++KS++  +L  I   GKI+++  AK+K     F   FT
Sbjct: 442 NGLLDSIETSALLKFESEFIAYLKSNKADILSEIVSAGKISDELSAKMKAATEEFKKMFT 501


>gi|38422323|emb|CAE45325.1| unnamed protein product [Magnetospirillum gryphiswaldense]
 gi|144898921|emb|CAM75785.1| ATP synthase F1, alpha subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K+ELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ Q+ PM+ EE+V  I+ GV
Sbjct: 390 IKMELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQPQFAPMSTEEEVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDKLD   +  FEK  L+ IK+    +L +I  E +I+ DT+ KLK  +  +   F
Sbjct: 450 KGYLDKLDVRDVGRFEKGLLSEIKAKAPEVLTAIATEKQISGDTEGKLKAFLDGYAKTF 508


>gi|56551135|ref|YP_161974.1| ATP synthase F0F1 subunit alpha [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|260753214|ref|YP_003226107.1| F0F1 ATP synthase subunit alpha [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|384411725|ref|YP_005621090.1| ATP synthase F1 subunit alpha [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|81598341|sp|Q5NQZ1.1|ATPA_ZYMMO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56542709|gb|AAV88863.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|258552577|gb|ACV75523.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|335932099|gb|AEH62639.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 509

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQV  ++ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGKRLTELLKQPQFHPMPFEEQVVSLFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D ++ + +  +E+  L++++SS   LL +I++ G  +++T +KL   + NF   F
Sbjct: 450 NGYIDGIEVSDVNRYEEAMLSYMRSSHNDLLATIRETGDFSDETKSKLTAALDNFAKIF 508


>gi|294656745|ref|XP_459057.2| DEHA2D13398p [Debaryomyces hansenii CBS767]
 gi|199431708|emb|CAG87225.2| DEHA2D13398p [Debaryomyces hansenii CBS767]
          Length = 545

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 92/119 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q LNRG RLT +LKQ Q  P+A EEQV +IY GV
Sbjct: 427 LKLYLAQYREVAAFAQFGSDLDASTKQTLNRGERLTNILKQKQGSPLAAEEQVPLIYAGV 486

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD++   ++  FE+ F +H+KS++  +L++I+++G+++++   KL++   +F+A+F
Sbjct: 487 NGFLDEVALDRLAEFEESFASHLKSNDSDILDAIREKGELSKELLEKLRSTTESFVASF 545


>gi|224005467|ref|XP_002291694.1| mitochondrial ATPase, inner membrane [Thalassiosira pseudonana
           CCMP1335]
 gi|220972213|gb|EED90545.1| mitochondrial ATPase, inner membrane [Thalassiosira pseudonana
           CCMP1335]
          Length = 542

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFA+FGSDLDAATQQ LNRGVRL ELLKQGQY P   EE VA ++ GV
Sbjct: 421 MKLELAQYREVAAFAKFGSDLDAATQQQLNRGVRLYELLKQGQYEPYEPEEVVASLFIGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKI-TEDTDAKLKTVVTNFLANF 119
           +G+ D++D   +  FE  FLAH+K +   +L+ I   G + + + + KL  +  +F   F
Sbjct: 481 KGYCDRIDVEHVQAFEGAFLAHMKGAHAAVLKEIVDSGYVLSPEVEKKLHEIAEDFTNGF 540

Query: 120 T 120
           +
Sbjct: 541 S 541


>gi|49476189|ref|YP_034230.1| ATP synthase F0F1 subunit alpha [Bartonella henselae str.
           Houston-1]
 gi|81696108|sp|Q6G1W7.1|ATPA_BARHE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49238997|emb|CAF28297.1| ATP synthase alpha chain [Bartonella henselae str. Houston-1]
          Length = 511

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  A +  FE+  L  ++S    LL++I  + ++T+D   KL  V+  +  NF+
Sbjct: 452 NGYLDALAVADVGRFEQGLLTLLRSDHSDLLQAIADQKQLTDDIKDKLIVVLNTYAKNFS 511


>gi|148252013|ref|YP_001236598.1| F0F1 ATP synthase subunit alpha [Bradyrhizobium sp. BTAi1]
 gi|158513267|sp|A5E948.1|ATPA_BRASB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146404186|gb|ABQ32692.1| ATP synthase F1 subcomplex alpha subunit [Bradyrhizobium sp. BTAi1]
          Length = 509

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK  V  F   F+
Sbjct: 450 NGYLDALPLGKVRAFEDGLLSLLRGKHADLLNTIRDTRDLSDDSAAKLKAAVEGFAKTFS 509


>gi|395780638|ref|ZP_10461095.1| ATP synthase subunit alpha [Bartonella washoensis 085-0475]
 gi|423711767|ref|ZP_17686072.1| ATP synthase subunit alpha [Bartonella washoensis Sb944nv]
 gi|395413434|gb|EJF79904.1| ATP synthase subunit alpha [Bartonella washoensis Sb944nv]
 gi|395418038|gb|EJF84369.1| ATP synthase subunit alpha [Bartonella washoensis 085-0475]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + +L++I  + +IT+D   KL  V+  +  NF+
Sbjct: 452 NGYLDPLAVSDVGRFEQGLLTLLRSDHQDILKAIANQKQITDDIKDKLIAVLNTYAKNFS 511


>gi|219123736|ref|XP_002182175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406136|gb|EEC46076.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 509

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFA+FGSDLD ATQQ LNRGVRL ELLKQGQY P   EE VA ++ GV
Sbjct: 388 MKLELAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQPYEPEEVVAALFIGV 447

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKI-TEDTDAKLKTVVTNFLANF 119
           +G+ D++D   +  FE  FLAH+K     +L  I   G + TED + K+  +   F + +
Sbjct: 448 KGYCDRIDVEHVQGFEVAFLAHVKGVHSKVLADIVSAGYVLTEDAEKKMHEIAEAFTSGY 507

Query: 120 T 120
           +
Sbjct: 508 S 508


>gi|219123734|ref|XP_002182174.1| synthase of mitochondrial ATP synthase [Phaeodactylum tricornutum
           CCAP 1055/1]
 gi|217406135|gb|EEC46075.1| synthase of mitochondrial ATP synthase [Phaeodactylum tricornutum
           CCAP 1055/1]
          Length = 544

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFA+FGSDLD ATQQ LNRGVRL ELLKQGQY P   EE VA ++ GV
Sbjct: 423 MKLELAQYREVAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQPYEPEEVVAALFIGV 482

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKI-TEDTDAKLKTVVTNFLANF 119
           +G+ D++D   +  FE  FLAH+K     +L  I   G + TED + K+  +   F + +
Sbjct: 483 KGYCDRIDVEHVQGFEVAFLAHVKGVHSKVLADIVSAGYVLTEDAEKKMHEIAEAFTSGY 542

Query: 120 T 120
           +
Sbjct: 543 S 543


>gi|313673549|ref|YP_004051660.1| ATP synthase F1 subunit alpha [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940305|gb|ADR19497.1| ATP synthase F1 subcomplex alpha subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 502

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQFGSDLDAATQ  LNRG +L ELLKQGQY P+ +EEQV  I+CGV
Sbjct: 382 LRLELAQYRELAAFAQFGSDLDAATQAQLNRGEKLVELLKQGQYKPVPVEEQVLAIFCGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    ++ FE EF+ ++K ++  ++  I  +  ++++  AK+K  V  F   FT
Sbjct: 442 NGYLDDIPTKSVSKFESEFINYVKINKPEIINEIVDKKALSDELTAKIKATVEEFKKQFT 501


>gi|319406293|emb|CBI79930.1| ATP synthase alpha chain [Bartonella sp. AR 15-3]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQHLLNRGARLTELLKQLQFSPLKVEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S+   LL +I ++ +IT+    K+  V+ N+  NF+
Sbjct: 452 NGYLDSLAVSDVGRFEQGLLTLLRSNHEELLNAIAEQKQITDQIKTKMVVVLDNYAKNFS 511


>gi|423714612|ref|ZP_17688836.1| ATP synthase subunit alpha [Bartonella elizabethae F9251]
 gi|395431390|gb|EJF97409.1| ATP synthase subunit alpha [Bartonella elizabethae F9251]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I ++ +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLVLLRSDYQDLLKAIAEQKQITDELKDKLITVLNTYAKNFS 511


>gi|395779088|ref|ZP_10459592.1| ATP synthase subunit alpha [Bartonella elizabethae Re6043vi]
 gi|395416416|gb|EJF82792.1| ATP synthase subunit alpha [Bartonella elizabethae Re6043vi]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I ++ +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLVLLRSDYQDLLKAIAEQKQITDELKDKLITVLNTYAKNFS 511


>gi|84515108|ref|ZP_01002471.1| ATP synthase subunit A [Loktanella vestfoldensis SKA53]
 gi|84511267|gb|EAQ07721.1| ATP synthase subunit A [Loktanella vestfoldensis SKA53]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 86/120 (71%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 391 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  FE   L +++++ + +L+ I KE  KI  D +AK+K  +  + A+F
Sbjct: 451 KGYLDKISVKDVGRFEAGLLKYLRTTGKDVLDMITKEDPKIKGDAEAKIKAALDAYAADF 510


>gi|451941195|ref|YP_007461833.1| F0F1 ATP synthase subunit alpha [Bartonella australis Aust/NH1]
 gi|451900582|gb|AGF75045.1| F0F1 ATP synthase subunit alpha [Bartonella australis Aust/NH1]
          Length = 511

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQHLLNRGARLTELLKQPQFSPLKVEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++   + LL++I  + +IT +T  KL  V+  +  NF+
Sbjct: 452 NGYLDSLVVSDVGRFEQGLLTLLRGDHQDLLDTISNQKQITSETKDKLVAVLDTYAKNFS 511


>gi|310815413|ref|YP_003963377.1| ATP synthase subunit A [Ketogulonicigenium vulgare Y25]
 gi|308754148|gb|ADO42077.1| ATP synthase subunit A [Ketogulonicigenium vulgare Y25]
          Length = 513

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QFGSDLDAATQQLLNRG RLTE++KQ QY P+   E V VIY  +
Sbjct: 393 IKLELAQYREMAAFSQFGSDLDAATQQLLNRGARLTEVMKQPQYAPLTSAEMVVVIYAAI 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  FE   L ++++  + LL+ I  E  KI  D +AK+KT + +F  +F
Sbjct: 453 KGYLDKIAVRDVVRFEAALLTYLRTQRKDLLDFIATEDPKIKGDAEAKIKTALDDFARDF 512


>gi|240851268|ref|YP_002972671.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
 gi|240268391|gb|ACS51979.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
          Length = 511

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I ++ +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDALAVSDVARFEQGLLVLLRSDYQDLLKAIAEQKQITDELKDKLITVLNTYAKNFS 511


>gi|260946940|ref|XP_002617767.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
 gi|238847639|gb|EEQ37103.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
          Length = 447

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 91/119 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQV VIY GV
Sbjct: 329 LKLFLAQYREVAAFAQFGSDLDASTKQTLARGERLTQLLKQKQYSPLAAEEQVPVIYAGV 388

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD ++ ++I  FE+ F++ +K+++  ++++I+ +G+++++    LK    +F+A+F
Sbjct: 389 NGFLDDIEISRIGEFEESFMSSLKANQPEIIDAIRNKGELSKEELESLKAATESFVASF 447


>gi|426401158|ref|YP_007020130.1| ATP synthase F1 subunit alpha [Candidatus Endolissoclinum patella
           L2]
 gi|425857826|gb|AFX98862.1| ATP synthase F1, alpha subunit [Candidatus Endolissoclinum patella
           L2]
          Length = 511

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQF SDLDA+TQ+LL RG RLTE+LKQ Q+ PM +E+Q+  I+ GV
Sbjct: 392 VRLELAQYREMAAFAQFASDLDASTQRLLARGARLTEILKQAQFNPMPVEKQIISIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +  A I+ FE+  L  I S    +LE+I+ E  +++DT AKL + +  F  NF 
Sbjct: 452 KGFLDNIHIADISRFEQLLLFEINSKMPSILETIRIENGLSDDTSAKLVSFIGKFANNFV 511


>gi|385232946|ref|YP_005794288.1| H+ transporting F1 ATP synthase subunit alpha [Ketogulonicigenium
           vulgare WSH-001]
 gi|343461857|gb|AEM40292.1| ATP synthase, H+ transporting, mitochondri al F1 complex, alpha
           subunit 1, cardiac muscle [Ketogulonicigenium vulgare
           WSH-001]
          Length = 512

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QFGSDLDAATQQLLNRG RLTE++KQ QY P+   E V VIY  +
Sbjct: 392 IKLELAQYREMAAFSQFGSDLDAATQQLLNRGARLTEVMKQPQYAPLTSAEMVVVIYAAI 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  FE   L ++++  + LL+ I  E  KI  D +AK+KT + +F  +F
Sbjct: 452 KGYLDKIAVRDVVRFEAALLTYLRTQRKDLLDFIATEDPKIKGDAEAKIKTALDDFARDF 511


>gi|83592560|ref|YP_426312.1| ATP synthase F1 subunit alpha [Rhodospirillum rubrum ATCC 11170]
 gi|386349286|ref|YP_006047534.1| ATP synthase F1 subunit alpha [Rhodospirillum rubrum F11]
 gi|114525|sp|P05036.1|ATPA_RHORU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007207|sp|Q2RV20.1|ATPA_RHORT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46366|emb|CAA26338.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575474|gb|ABC22025.1| ATP synthase F1, alpha subunit [Rhodospirillum rubrum ATCC 11170]
 gi|346717722|gb|AEO47737.1| ATP synthase F1, subunit alpha [Rhodospirillum rubrum F11]
          Length = 510

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ QY P+A+EEQV VIY G 
Sbjct: 391 IKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQAQYSPLAVEEQVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDKL    +  +E   L  +++S   LLESI+    ++++ + KL   + +F   F
Sbjct: 451 RGYLDKLKTTDVVRYEASLLGALRTSGADLLESIRTGKALSKEIEQKLVKFLDDFGKKF 509


>gi|149186091|ref|ZP_01864405.1| F0F1 ATP synthase subunit alpha [Erythrobacter sp. SD-21]
 gi|148830122|gb|EDL48559.1| F0F1 ATP synthase subunit alpha [Erythrobacter sp. SD-21]
          Length = 509

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 MKLDLAQYREMAAFAQFGSDLDAATQKLLNRGARLTELLKQPQFSPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++T +E + L+ ++S    +LE+I+  GK  +DT  K+   +  F   F
Sbjct: 450 NGYLDDVAVDRVTDYEDQMLSFMRSEHADVLETIRTTGKFEDDTKDKVVDALKTFAKQF 508


>gi|92116153|ref|YP_575882.1| F0F1 ATP synthase subunit alpha [Nitrobacter hamburgensis X14]
 gi|119367958|sp|Q1QQS5.1|ATPA_NITHX RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91799047|gb|ABE61422.1| ATP synthase F1 subcomplex alpha subunit [Nitrobacter hamburgensis
           X14]
          Length = 510

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   K+  FE   L+ ++     +L +I++   +++DT AKL++ V  +   F
Sbjct: 451 NGYLDKLPLGKVRAFEDGLLSLLRGKNVEILNTIRESRDLSDDTAAKLRSAVDGYAKTF 509


>gi|90421700|ref|YP_530070.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisB18]
 gi|119367962|sp|Q21CY5.1|ATPA_RHOPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|90103714|gb|ABD85751.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisB18]
          Length = 510

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+  FE   L+ ++     +L +I+    ++ +T A+LK+VV  +   F
Sbjct: 451 NGYLDPLPVSKVRAFEDGLLSLLRGKNVEILNTIRDSRDLSNETAAQLKSVVEGYAKTF 509


>gi|395788895|ref|ZP_10468434.1| ATP synthase subunit alpha [Bartonella taylorii 8TBB]
 gi|395431760|gb|EJF97772.1| ATP synthase subunit alpha [Bartonella taylorii 8TBB]
          Length = 511

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  +++  + LL++I  + +IT++   KL TV+  +  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLTLLRNDHQSLLKAIADQKQITDEIKDKLITVLKTYAKNFS 511


>gi|258541220|ref|YP_003186653.1| F0F1 ATP synthase subunit alpha [Acetobacter pasteurianus IFO
           3283-01]
 gi|384041141|ref|YP_005479885.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-12]
 gi|384049656|ref|YP_005476719.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|384052766|ref|YP_005485860.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|384055998|ref|YP_005488665.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|384058639|ref|YP_005497767.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|384061933|ref|YP_005482575.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|384118009|ref|YP_005500633.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256632298|dbj|BAH98273.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635355|dbj|BAI01324.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638410|dbj|BAI04372.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641464|dbj|BAI07419.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|256644519|dbj|BAI10467.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|256647574|dbj|BAI13515.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|256650627|dbj|BAI16561.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653618|dbj|BAI19545.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-12]
          Length = 511

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 87/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ++L RG RL ELLKQ Q  P+ +EEQV V++ G 
Sbjct: 391 IKLELAQYREMAAFSQFASDLDPATQKMLARGARLVELLKQSQSSPLTVEEQVVVLFAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +   K+ ++E+  L  ++S+ + +L++IKKE  I++D +A+L   +T F  NF 
Sbjct: 451 RGFVDGIAVDKVVSWERALLNDVRSAGKDILDTIKKEKAISKDLEARLTEYLTTFNRNFA 510

Query: 121 G 121
           G
Sbjct: 511 G 511


>gi|169832276|ref|YP_001718258.1| ATP synthase F1 subunit alpha [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226739870|sp|B1I6J9.1|ATPA_DESAP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169639120|gb|ACA60626.1| ATP synthase F1, alpha subunit [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 507

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT+  L RG R+ ELLKQGQY PM +EEQV  IY GV
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDRATRARLTRGERMVELLKQGQYNPMPLEEQVMSIYTGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD L   K+  FE EFL ++++ +  + E IK   KIT + ++KLK  V  F   F 
Sbjct: 442 RGYLDSLPADKVRDFEIEFLKYMRTEKPEIGEDIKVNQKITPENESKLKAAVEEFKQMFV 501


>gi|429769420|ref|ZP_19301530.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta 470-4]
 gi|429187084|gb|EKY28004.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta 470-4]
          Length = 510

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLD +TQ+LL RG RLTELLKQ QY P+A+EEQV  IY G 
Sbjct: 391 IKGELAQYREMAAFAKFGSDLDVSTQRLLARGARLTELLKQPQYSPLAVEEQVVSIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD +  + +  FE E LA + ++   LLE I+ +  +T + +A+LK ++  F   F
Sbjct: 451 RGYLDGIAVSDVGRFESELLARVHANHASLLEGIRTKKALTPELEAELKDILAAFAKTF 509


>gi|421849284|ref|ZP_16282266.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus NBRC
           101655]
 gi|421853085|ref|ZP_16285765.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus subsp.
           pasteurianus LMG 1262 = NBRC 106471]
 gi|371459922|dbj|GAB27469.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus NBRC
           101655]
 gi|371478662|dbj|GAB30968.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus subsp.
           pasteurianus LMG 1262 = NBRC 106471]
          Length = 511

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 87/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ++L RG RL ELLKQ Q  P+ +EEQV V++ G 
Sbjct: 391 IKLELAQYREMAAFSQFASDLDPATQKMLARGARLVELLKQSQSSPLTVEEQVVVLFAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +   K+ ++E+  L  ++S+ + +L++IKKE  I++D +A+L   +T F  NF 
Sbjct: 451 RGFVDGIAVDKVVSWERALLNDVRSAGKDILDTIKKEKAISKDLEARLTEYLTTFNRNFA 510

Query: 121 G 121
           G
Sbjct: 511 G 511


>gi|149913694|ref|ZP_01902227.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. AzwK-3b]
 gi|149812814|gb|EDM72643.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. AzwK-3b]
          Length = 512

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 86/120 (71%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+   ++  FE+  L H++S  + LL+ I  ++ KI  + + K+K  +  F A+F
Sbjct: 452 KGYLDKIAVDQVGRFEQGLLNHLRSKHQDLLDHITTQDPKIKGEAEDKIKAALDEFAADF 511


>gi|22550331|ref|NP_689366.1| ATP synthase F1 subunit alpha [Chaetosphaeridium globosum]
 gi|22416997|gb|AAM96596.1|AF494279_1 ATP synthase F1 subunit alpha [Chaetosphaeridium globosum]
          Length = 508

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 3/120 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDA+TQ LLNRG RLTE+LKQ QY P+ IE+Q+ VI+  V
Sbjct: 389 LKLELAQYREVAAFAQFGSDLDASTQYLLNRGARLTEVLKQAQYSPLPIEKQIVVIFAAV 448

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD +  + I  +E++ L   K+    LL +I KE  +TE   A+L    + F ANF 
Sbjct: 449 KGYLDSIAISSIGEYEQQLL---KAVPVELLSAILKEKNMTETISAELANFCSTFTANFN 505


>gi|298293439|ref|YP_003695378.1| ATP synthase F1 subunit alpha [Starkeya novella DSM 506]
 gi|296929950|gb|ADH90759.1| ATP synthase F1, alpha subunit [Starkeya novella DSM 506]
          Length = 509

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY G 
Sbjct: 390 IKGELAQYRELAAFAQFGSDLDAATQKLLNRGARLTELLKQSQFSPLKVEEQVVVIYAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+  FE   L  ++S    +L++I+   ++++DT  KL   +  F   F
Sbjct: 450 NGYLDALPVSKVREFENGLLLALRSKHADILDTIRTSKELSKDTTEKLVKAIDAFAKTF 508


>gi|367471805|ref|ZP_09471406.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
 gi|365275898|emb|CCD83874.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 285]
          Length = 509

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK  V  F   F+
Sbjct: 450 NGYLDGLPLNKVRAFEDGLLSLLRGKHADLLNTIRDTRDLSDDSAAKLKAAVEGFAKTFS 509


>gi|323702634|ref|ZP_08114296.1| ATP synthase F1, alpha subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|333924781|ref|YP_004498361.1| ATP synthase subunit alpha [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|323532453|gb|EGB22330.1| ATP synthase F1, alpha subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|333750342|gb|AEF95449.1| ATP synthase subunit alpha [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 501

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  LNRG R  ++LKQGQY P  +EEQV VIY  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQARLNRGARTVQILKQGQYKPYPVEEQVVVIYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD ++  KIT FE+ F+  ++S++  +L +I+ + +I  +TDAKL+  +  F   F
Sbjct: 442 KGFLDDIELNKITAFEEGFIKFMRSAKADILAAIRNDKEIKPETDAKLQAAIEEFKKTF 500


>gi|418052417|ref|ZP_12690498.1| ATP synthase subunit alpha [Mycobacterium rhodesiae JS60]
 gi|353181422|gb|EHB46961.1| ATP synthase subunit alpha [Mycobacterium rhodesiae JS60]
          Length = 549

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L+RGVRL ELLKQ QY PMA+E+QV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLDRGVRLVELLKQPQYSPMAVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD +    ++ FE EFL H+K+S   +L  IK+  K++E+ + KL +V+ +F   F
Sbjct: 453 QGHLDSVPAEDVSRFESEFLEHVKASHADILTGIKETKKLSEEAEEKLVSVINDFKKGF 511


>gi|346993675|ref|ZP_08861747.1| F0F1 ATP synthase subunit alpha [Ruegeria sp. TW15]
          Length = 512

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+D + +  +E   LAH++     LL+ I  E  KI  D   KLK  +  + A F
Sbjct: 452 NGYLDKIDVSDVGRYEAGLLAHLRGKHADLLKWITDEDPKIKGDAADKLKAAIDEYAATF 511


>gi|126736544|ref|ZP_01752284.1| ATP synthase F1, alpha subunit [Roseobacter sp. CCS2]
 gi|126713857|gb|EBA10728.1| ATP synthase F1, alpha subunit [Roseobacter sp. CCS2]
          Length = 511

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 391 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+D  ++  FE   L H++++   +L+ I KE  KI  + + K+K  +  F  +F
Sbjct: 451 HGYLDKVDVKEVGRFEAGLLKHMRTNASDVLDMITKEDPKIKGEAEDKIKAAIDAFAKDF 510


>gi|426337428|ref|XP_004032708.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Gorilla
           gorilla gorilla]
          Length = 93

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 74/91 (81%)

Query: 29  LNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEFLAHIKSSER 88
           ++ GV LTELLKQGQY PMAIEEQVAVIY GVRG+LDKL+P+K+T FE  FL+ + S  +
Sbjct: 1   MSSGVHLTELLKQGQYSPMAIEEQVAVIYVGVRGYLDKLEPSKVTKFENAFLSRVVSQHQ 60

Query: 89  GLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            LL +I+ +GKI+E+ DAKLK +VTNFLA F
Sbjct: 61  ALLGTIRADGKISEEPDAKLKEIVTNFLAGF 91


>gi|365857093|ref|ZP_09397092.1| ATP synthase F1, alpha subunit [Acetobacteraceae bacterium AT-5844]
 gi|363716831|gb|EHM00225.1| ATP synthase F1, alpha subunit [Acetobacteraceae bacterium AT-5844]
          Length = 511

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLDA+TQ LL RG RLTELLKQ QY P+ +EEQV  ++ G 
Sbjct: 391 IKLELAQYREMAAFAQFASDLDASTQALLARGARLTELLKQPQYQPVPVEEQVISLFSGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK++  K+  FE+  L+ IK+ +  ++ SI+ + +IT+D +A L + +  F  +F
Sbjct: 451 RGYLDKIEVNKVGEFERRMLSEIKAQKPEIVASIRDKKEITKDNEAALVSFLDGFAKSF 509


>gi|353526566|ref|YP_004927635.1| ATP synthase F1 subunit alpha (mitochondrion) [Anomodon rugelii]
 gi|336089492|gb|AEH99682.1| ATP synthase F1 subunit alpha [Anomodon rugelii]
          Length = 518

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQ GSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 397 LKLELAQYREVAAFAQSGSDLDAATQYLLNRGARLTEVLKQPQYSPIPIEKQIVVIYAAV 456

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++  + I  +E E L  I S    +L +I ++  ITE  D++L T    F  +F
Sbjct: 457 KGYLDQIPISSINQYEHELLKSIDSD---ILSAIVQQKNITEQIDSQLATFCQKFTQSF 512


>gi|163745698|ref|ZP_02153058.1| F0F1 ATP synthase subunit alpha [Oceanibulbus indolifex HEL-45]
 gi|161382516|gb|EDQ06925.1| F0F1 ATP synthase subunit alpha [Oceanibulbus indolifex HEL-45]
          Length = 512

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQQLLNRGARLTELMKQPQYAPLTNSEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+D   +  FE   LAH++S    LL+ I   + K+  + + K+K  +  F A+F
Sbjct: 452 HGYLDKVDLNDVGRFEAGLLAHLRSKHDDLLKDITNNDRKVKGELEEKIKAAIDGFAADF 511


>gi|407783441|ref|ZP_11130641.1| F0F1 ATP synthase subunit alpha [Oceanibaculum indicum P24]
 gi|407201566|gb|EKE71564.1| F0F1 ATP synthase subunit alpha [Oceanibaculum indicum P24]
          Length = 509

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+ AFAQF SDLDA+TQ+LL RG RLT+LLKQ QY P+ +EEQVAVIY GV
Sbjct: 390 IKLELAQYREMEAFAQFASDLDASTQRLLARGSRLTQLLKQPQYSPLPVEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+   ++  +E   L+ ++   + +L +I+KE ++T + + KLK ++  +   F
Sbjct: 450 KGYLDKIPVDQVNKYEAGLLSELRGKGKDILAAIRKEQQLTSEIEGKLKDLLETYSKTF 508


>gi|395765450|ref|ZP_10446052.1| ATP synthase subunit alpha [Bartonella sp. DB5-6]
 gi|395411984|gb|EJF78500.1| ATP synthase subunit alpha [Bartonella sp. DB5-6]
          Length = 511

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLD++TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDSSTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S  + LL++I  + +IT++   KL TV+ ++  NF+
Sbjct: 452 NGYLDSLAVSDVARFEQGLLTLLRSDYQDLLKAIADQKQITDELKDKLITVLKSYAKNFS 511


>gi|338741531|ref|YP_004678493.1| ATP synthase F1 subunit alpha [Hyphomicrobium sp. MC1]
 gi|337762094|emb|CCB67929.1| ATP synthase F1, alpha subunit [Hyphomicrobium sp. MC1]
          Length = 509

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQKLLARGARLTELLKQPQFSPLKMEEQVAVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +  + +  FE+  LA ++ SE+ LLE+I KE  ++ D++ KL   +  F   F 
Sbjct: 450 RGYLDAIPVSAVGKFEEGVLAGLR-SEKTLLETIAKEKALSADSEKKLVEFLDKFAKGFA 508


>gi|158425751|ref|YP_001527043.1| F0F1 ATP synthase subunit alpha [Azorhizobium caulinodans ORS 571]
 gi|172047827|sp|A8HS15.1|ATPA_AZOC5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158332640|dbj|BAF90125.1| ATP synthase F1 alpha subunit [Azorhizobium caulinodans ORS 571]
          Length = 510

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY G 
Sbjct: 391 IKGELAQYRELAAFAQFGSDLDASTQKLLNRGARLTELLKQSQFSPLKVEEQVVVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE  FL  +++  + LL++I+   ++++D+ A L   +  F  +F
Sbjct: 451 NGYLDNLPLNKVREFEAGFLLAMRTQHQDLLDTIRTSKELSKDSIANLTKALDAFAKSF 509


>gi|314908370|gb|ADT62132.1| ATP synthase subunit 1 [Isoetes engelmannii]
          Length = 514

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFA+FGSDLDAAT+ LLNRG RLTE+LKQ QY P+ IE+++ VIY  V
Sbjct: 389 LKLELAQYREVAAFAEFGSDLDAATKYLLNRGARLTEVLKQPQYSPLPIEKEIVVIYAAV 448

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++    I  +E+E L   KS + G+L SI +E  ITE  +++L T    F  +F
Sbjct: 449 KGYLDEIPIPIIEKYEQELL---KSIDPGILSSIAEEKSITEQINSQLATFYKEFTQSF 504


>gi|209916091|gb|ACI95886.1| ATP synthase F1 subunit alpha [Isoetes engelmannii]
 gi|217331573|gb|ACK38299.1| ATP synthase F1 subunit alpha [Isoetes engelmannii]
          Length = 514

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFA+FGSDLDAAT+ LLNRG RLTE+LKQ QY P+ IE+++ VIY  V
Sbjct: 389 LKLELAQYREVAAFAEFGSDLDAATKYLLNRGARLTEVLKQPQYSPLPIEKEIVVIYAAV 448

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD++    I  +E+E L   KS + G+L SI +E  ITE  +++L T    F  +F
Sbjct: 449 KGYLDEIPIPIIEKYEQELL---KSIDPGILSSIAEEKSITEQINSQLATFYKEFTQSF 504


>gi|340505928|gb|EGR32191.1| ATP synthase alpha subunit precursor, putative [Ichthyophthirius
           multifiliis]
          Length = 544

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 82/116 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K  LAQYRE+AAFAQFGSDLDA TQ  LNRG +LTELLKQ QY PM  EEQV VI+ GV
Sbjct: 419 LKNRLAQYRELAAFAQFGSDLDAHTQSELNRGEKLTELLKQKQYQPMKAEEQVCVIFAGV 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G+LD L   +I  FE +FL HI+S+   LL+ I++ G + ++   +LKT +  F+
Sbjct: 479 NGYLDNLQTYEIRNFESKFLEHIRSNHASLLQRIRETGDLKDNDVNELKTAIPLFI 534


>gi|209543483|ref|YP_002275712.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531160|gb|ACI51097.1| ATP synthase F1, alpha subunit [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 512

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 87/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+A+EEQV V++ G 
Sbjct: 392 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLAVEEQVCVLFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +   K++++E++ LA + +  + +LESI+ E +IT+D D +L   +T+F   F 
Sbjct: 452 RGFIDAVPVDKVSSYERQLLAELHTGGKEILESIRTERQITKDNDTRLTDFLTSFGRQFA 511

Query: 121 G 121
           G
Sbjct: 512 G 512


>gi|418057134|ref|ZP_12695181.1| ATP synthase subunit alpha [Hyphomicrobium denitrificans 1NES1]
 gi|353204774|gb|EHB70187.1| ATP synthase subunit alpha [Hyphomicrobium denitrificans 1NES1]
          Length = 509

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LL RG RLTELLKQ Q+ P+ +EEQVAVI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQKLLARGARLTELLKQPQFSPLKMEEQVAVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +  + +  FE+  LA ++ +E+ + E+I KE  ++ DT+ KL   +  F  +FT
Sbjct: 450 RGYLDAIPVSAVGKFEQGVLAGLR-AEKTIFETIAKEKALSADTEKKLVEFLDKFSKSFT 508


>gi|340504264|gb|EGR30722.1| ATP synthase alpha subunit precursor, putative [Ichthyophthirius
           multifiliis]
          Length = 545

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 82/116 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K  LAQYRE+AAFAQFGSDLDA TQ  LNRG +LTELLKQ QY PM  EEQV VI+ GV
Sbjct: 420 LKNRLAQYRELAAFAQFGSDLDAHTQSELNRGEKLTELLKQKQYQPMKAEEQVCVIFAGV 479

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G+LD L   +I  FE +FL HI+S+   LL+ I++ G + +   A+LKT +  F+
Sbjct: 480 NGYLDNLQTFEIRHFESKFLEHIRSNHASLLQRIRETGDLKDGDVAELKTAIPLFI 535


>gi|294678492|ref|YP_003579107.1| ATP synthase F1 subunit alpha [Rhodobacter capsulatus SB 1003]
 gi|2493020|sp|P72245.3|ATPA_RHOCA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|1524322|emb|CAA67908.1| FoF1 ATP synthase [Rhodobacter capsulatus]
 gi|294477312|gb|ADE86700.1| ATP synthase F1, alpha subunit [Rhodobacter capsulatus SB 1003]
          Length = 509

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E VAVI+ G 
Sbjct: 389 VKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVAVIFAGT 448

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
            G LD +   ++  FEK  LA+++S+ + +LE + KE  KI  D + KLK  +  F   F
Sbjct: 449 NGFLDAVPVKEVGRFEKGLLAYLRSTRKDVLEWLTKEDPKIKGDAEKKLKDAIAEFAKTF 508


>gi|110225680|ref|YP_665685.1| ATP synthase F1 subunit alpha [Mesostigma viride]
 gi|17222551|gb|AAL36724.1|AF353999_4 ATP synthase F1 subunit alpha [Mesostigma viride]
          Length = 519

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 89/120 (74%), Gaps = 3/120 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+A+EEQVA++Y  V
Sbjct: 403 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEVLKQAQYSPLAMEEQVAILYGAV 462

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G++DKL  + I  +E+  L  I+ S   LL++I+++ +++ + + +L    T  +  F+
Sbjct: 463 KGYIDKLKLSDIRKYEETVLQTIEPS---LLQAIREKKELSPELNQRLSAFFTEMIKKFS 519


>gi|329114828|ref|ZP_08243585.1| ATP synthase subunit alpha [Acetobacter pomorum DM001]
 gi|326695959|gb|EGE47643.1| ATP synthase subunit alpha [Acetobacter pomorum DM001]
          Length = 512

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 86/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ++L RG RL ELLKQ Q  P+ +EEQV V++ G 
Sbjct: 392 IKLELAQYREMAAFSQFASDLDPATQKMLARGARLVELLKQSQSSPLTVEEQVVVLFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +   K+  +E+  L  ++S+ + +L++IKKE  I++D +A+L   +T F  NF 
Sbjct: 452 RGFVDGIAVDKVVGWERALLNDVRSAGKDILDTIKKEKAISKDLEARLTEYLTTFNRNFA 511

Query: 121 G 121
           G
Sbjct: 512 G 512


>gi|121602713|ref|YP_988450.1| F0F1 ATP synthase subunit alpha [Bartonella bacilliformis KC583]
 gi|421760268|ref|ZP_16197087.1| F0F1 ATP synthase subunit alpha [Bartonella bacilliformis INS]
 gi|158513071|sp|A1UR47.1|ATPA_BARBK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120614890|gb|ABM45491.1| ATP synthase F1, alpha subunit [Bartonella bacilliformis KC583]
 gi|411175985|gb|EKS46006.1| F0F1 ATP synthase subunit alpha [Bartonella bacilliformis INS]
          Length = 511

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV  I+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVTIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  LA ++S  + LL +I  + +IT++   KL  ++  +  NF+
Sbjct: 452 NGYLDALAVSDVGRFERGLLALLRSDHQELLNAIASQKQITDELKGKLVAILDRYAKNFS 511


>gi|118590576|ref|ZP_01547978.1| F0F1 ATP synthase subunit alpha [Stappia aggregata IAM 12614]
 gi|118437039|gb|EAV43678.1| F0F1 ATP synthase subunit alpha [Stappia aggregata IAM 12614]
          Length = 509

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  FE+  L  ++   + LL++I ++  + ++   KLK  +  F  NF
Sbjct: 450 NGYLDSIPVNRVRDFEEGLLLFLRGDHKALLDAIWEKKALDDELTGKLKAAIDAFAKNF 508


>gi|83854834|ref|ZP_00948364.1| ATP synthase subunit A [Sulfitobacter sp. NAS-14.1]
 gi|83941357|ref|ZP_00953819.1| ATP synthase subunit A [Sulfitobacter sp. EE-36]
 gi|83842677|gb|EAP81844.1| ATP synthase subunit A [Sulfitobacter sp. NAS-14.1]
 gi|83847177|gb|EAP85052.1| ATP synthase subunit A [Sulfitobacter sp. EE-36]
          Length = 512

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+D  ++  FE   LAH++S    L+  I   + K+  + + K+K  + +F A+F
Sbjct: 452 NGYLDKIDVKEVGRFEAGLLAHLRSKHADLMADITNNDRKVKGELEDKIKAAIDSFAADF 511


>gi|414176632|ref|ZP_11430861.1| ATP synthase subunit alpha [Afipia broomeae ATCC 49717]
 gi|410886785|gb|EKS34597.1| ATP synthase subunit alpha [Afipia broomeae ATCC 49717]
          Length = 510

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LL RG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLARGSRLTELLKQPQFSPLKMEEQVVVIYAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +  AK+  FE+  L+ ++     LL +I+    +++D+  KLK  V  F   F
Sbjct: 451 NGYLDAIPVAKVREFEEGLLSLLRGKHVDLLNAIRDSKDLSDDSAGKLKAAVEGFAKTF 509


>gi|146337562|ref|YP_001202610.1| ATP synthase F0F1 subunit alpha [Bradyrhizobium sp. ORS 278]
 gi|365880192|ref|ZP_09419572.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
 gi|365887313|ref|ZP_09426166.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
 gi|158514291|sp|A4YKD8.1|ATPA_BRASO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146190368|emb|CAL74364.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 278]
 gi|365291759|emb|CCD92103.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS 375]
 gi|365337092|emb|CCD98697.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. STM 3809]
          Length = 509

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAATQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIWAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD L   K+  FE   L+ ++     LL +I+    +++D+ AKLK  V  F   F+
Sbjct: 450 NGFLDGLPLNKVRAFEDGLLSLLRGKHADLLNTIRDTRDLSDDSAAKLKAAVEGFAKTFS 509


>gi|304392608|ref|ZP_07374548.1| ATP synthase F1, alpha subunit [Ahrensia sp. R2A130]
 gi|303295238|gb|EFL89598.1| ATP synthase F1, alpha subunit [Ahrensia sp. R2A130]
          Length = 509

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAV++ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQAQFSPLQMEEQVAVLFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDKL   ++  FE   L  + +    L+  I  +  +++D  A+LK+ +  F   F
Sbjct: 450 NGYLDKLPVNRVGAFETGLLQSMHTDHADLMSEIADKKALSDDMTARLKSAIDAFAKGF 508


>gi|149202399|ref|ZP_01879372.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. TM1035]
 gi|149144497|gb|EDM32528.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. TM1035]
          Length = 512

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+  +++  +E+  L H++     LL  I KE  KI  + + ++K  +  F A+F
Sbjct: 452 KGYLDKIPVSQVGRYEQGLLKHLRGKHADLLAYITKEDPKIKGEAEDRIKAALDEFAADF 511


>gi|146184059|ref|XP_001027692.2| ATP synthase F1, alpha subunit family protein [Tetrahymena
           thermophila]
 gi|146143383|gb|EAS07450.2| ATP synthase F1, alpha subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 546

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 83/116 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LA YRE+AAF+QFGSDLDA TQQ LN G RL E+LKQ QY PM +EEQV +I+ GV
Sbjct: 421 LKLTLATYRELAAFSQFGSDLDAKTQQQLNTGERLVEMLKQNQYTPMKVEEQVCIIFAGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           +G LD L  +++  FEK+FL H++++   LL+ I+  G ++E    +L T++  F+
Sbjct: 481 KGFLDALVTSEVLKFEKKFLEHVRTNHSALLKRIRDSGDLSEVDTNELNTIIPLFI 536


>gi|194333106|ref|YP_002014966.1| F0F1 ATP synthase subunit alpha [Prosthecochloris aestuarii DSM
           271]
 gi|194310924|gb|ACF45319.1| ATP synthase F1, alpha subunit [Prosthecochloris aestuarii DSM 271]
          Length = 526

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD AT+  L+RG RL E+LKQGQYVPM +E+QVA+IY G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKATKAQLDRGERLVEILKQGQYVPMPVEKQVAIIYVGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD LD   +  FE+EFLA ++     +L +I + GK+  D  ++LK V   F+++F
Sbjct: 462 QGLLDSLDTKYVRQFEEEFLALLEHKHSDILSTIAETGKMEADLSSRLKEVAEKFMSSF 520


>gi|357386194|ref|YP_004900918.1| ATP synthase subunit alpha [Pelagibacterium halotolerans B2]
 gi|351594831|gb|AEQ53168.1| ATP synthase alpha chain [Pelagibacterium halotolerans B2]
          Length = 511

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K EL+QYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ G 
Sbjct: 391 LKGELSQYREMAAFAQFGSDLDAATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGA 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L    +  FEK  L+H++S    +L  I KE  +T+    +L + +  F   +T
Sbjct: 451 NGYLDDLPVRGVQAFEKALLSHLRSKHADILGDIAKEKALTDGIKERLVSALDAFKKTYT 510


>gi|126728276|ref|ZP_01744092.1| F0F1 ATP synthase subunit alpha [Sagittula stellata E-37]
 gi|126711241|gb|EBA10291.1| F0F1 ATP synthase subunit alpha [Sagittula stellata E-37]
          Length = 511

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E V VI  G 
Sbjct: 391 IKLSLAQYREMAAFAQFGSDLDAATQRLLNRGARLTELMKQPQYSPLTNAEIVVVICAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+  + +  FEK  L H++     LL+ I  E  KI  D +AK+K V+  + A+F
Sbjct: 451 LGYLDKVAVSDVNRFEKGLLQHVRGKHSDLLDWITNEDPKIKGDAEAKIKAVLDEYAADF 510

Query: 120 T 120
           +
Sbjct: 511 S 511


>gi|296446171|ref|ZP_06888119.1| ATP synthase F1, alpha subunit [Methylosinus trichosporium OB3b]
 gi|296256365|gb|EFH03444.1| ATP synthase F1, alpha subunit [Methylosinus trichosporium OB3b]
          Length = 509

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+ +EEQ  VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDAVTQRLLNRGARLTELLKQPQFSPLKMEEQTCVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   ++  FE   L+ +++    +LESI+    + + T A+LK+V+  F  +F
Sbjct: 450 NGYLDPLPVGRVRAFEDGLLSLLRTQYAHILESIRTTKDLPDATAAELKSVLDAFSKSF 508


>gi|220932618|ref|YP_002509526.1| ATP synthase F1 subunit alpha [Halothermothrix orenii H 168]
 gi|254808099|sp|B8CZ12.1|ATPA_HALOH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219993928|gb|ACL70531.1| ATP synthase F1, alpha subunit [Halothermothrix orenii H 168]
          Length = 541

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFAQFGSDLD ATQ+ L RG R+ E+LKQ QY PM +E+QV +IY  V
Sbjct: 383 LRLDLSQYRELEAFAQFGSDLDKATQRRLERGERIVEVLKQPQYTPMDMEDQVMIIYTVV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +    I  FE EFL++I S+   + E+IKK G + ++T+ KL  V+  F  NF 
Sbjct: 443 NGHLDDIPVDNIERFEDEFLSYIHSNYPEIPETIKKTGDLDDETEEKLTGVIKEFKENFN 502


>gi|288959335|ref|YP_003449676.1| F-type H+-transporting ATPase subunit alpha [Azospirillum sp. B510]
 gi|288911643|dbj|BAI73132.1| F-type H+-transporting ATPase alpha chain [Azospirillum sp. B510]
          Length = 509

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K+ELAQYRE+AAFAQF SDLDA+TQ+LL RG RLTELLKQGQ+ P+ +EEQV  I+ GV
Sbjct: 390 IKMELAQYREMAAFAQFASDLDASTQRLLARGARLTELLKQGQFQPLPVEEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +    +  FE +FL+ I++    +L +I+ + +IT  T+ KLK  +  F   F
Sbjct: 450 KGYLDAIKVEDVNRFEAKFLSEIRAKGADILAAIRTDKQITSATEEKLKAFLDGFAKVF 508


>gi|383783360|ref|YP_005467926.1| ATP synthase F1 subunit alpha [Leptospirillum ferrooxidans C2-3]
 gi|383082269|dbj|BAM05796.1| ATP synthase F1, alpha subunit [Leptospirillum ferrooxidans C2-3]
          Length = 500

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L++AQ+RE+AAFAQF SDLD  T+  + RG+RLTE+LKQ  Y P+ +E+QVA+IY G 
Sbjct: 380 LRLDMAQFRELAAFAQFASDLDKTTRDQIERGLRLTEILKQPNYSPLPVEKQVAIIYAGT 439

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD + P  ++ FEKEF   +++++ G+L+SI+ E  I++ T  KLK  + +F++ F
Sbjct: 440 NGYLDSIKPDSVSRFEKEFFLFVEANDPGILDSIRNEKVISDATAEKLKNALKSFVSMF 498


>gi|291280261|ref|YP_003497096.1| F0F1-type ATP synthase subunit alpha [Deferribacter desulfuricans
           SSM1]
 gi|290754963|dbj|BAI81340.1| F0F1-type ATP synthase, alpha subunit [Deferribacter desulfuricans
           SSM1]
          Length = 502

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  LNRG +L E+LKQGQY P+ +EEQV +I+ GV
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATRAQLNRGEKLVEILKQGQYQPVPVEEQVLIIFTGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I  FEKEF  ++K+++  +LE I+ +  + +D   K+K  V  F   F 
Sbjct: 442 NGYLDDIPTKSIQRFEKEFTNYVKTNKPDILEDIRTKKALDDDLTNKMKAAVEEFKKQFN 501


>gi|406925503|gb|EKD61960.1| hypothetical protein ACD_54C00005G0002 [uncultured bacterium]
          Length = 512

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQQLLNRG RLTEL+KQ QY PM   E V VIY G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDASTQQLLNRGARLTELMKQNQYSPMTNAEIVVVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+    I  FE   L H++++ + LLE I K + K+  D +  +K  +  F  +F
Sbjct: 452 SGALDKIAVKDIGRFEAGLLKHLRTTGKALLEDITKNDRKVAGDLEKAIKAEIAAFAKDF 511


>gi|374292981|ref|YP_005040016.1| ATP synthase, F1 sector subunit alpha [Azospirillum lipoferum 4B]
 gi|357424920|emb|CBS87800.1| ATP synthase, F1 sector, alpha subunit [Azospirillum lipoferum 4B]
          Length = 509

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K+ELAQYRE+AAFAQF SDLDA+TQ+LL RG RLTELLKQGQ+ P+ +EEQV  I+ GV
Sbjct: 390 IKMELAQYREMAAFAQFASDLDASTQRLLARGARLTELLKQGQFQPLPVEEQVVSIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +    +  FE +FL+ I++    +L +I+ + +IT  T+ KLK  +  F   F
Sbjct: 450 KGYLDAIRVEDVNRFEAKFLSEIRAKGADILAAIRTDKQITSATEEKLKAFLDGFAKVF 508


>gi|85704180|ref|ZP_01035283.1| ATP synthase subunit A [Roseovarius sp. 217]
 gi|85671500|gb|EAQ26358.1| ATP synthase subunit A [Roseovarius sp. 217]
          Length = 512

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQAQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+   ++  +E+  L H++     LL  I KE  KI  + + ++K  +  F A+F
Sbjct: 452 KGYLDKIPVKQVGPYEQGLLKHLRGKHAELLAYITKEDPKIKGEAEDRIKAALDEFAADF 511


>gi|294943678|ref|XP_002783935.1| ATP synthase F1 subunit alpha, putative [Perkinsus marinus ATCC
           50983]
 gi|239896850|gb|EER15731.1| ATP synthase F1 subunit alpha, putative [Perkinsus marinus ATCC
           50983]
          Length = 318

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 81/116 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLD ATQQ L RG  LTELLKQ QY PMA E +V  IY GV
Sbjct: 192 LKLELAQYREVAAFAQFGSDLDQATQQQLLRGGILTELLKQKQYSPMATEVEVVTIYAGV 251

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG+LDK+   +I  FE  +L H+  +   +L++I+ E  I++ T+  LK  +  FL
Sbjct: 252 RGYLDKIAQKEIPRFETMWLEHVSQNHPDILKAIRAEHLISDTTEENLKNAMEEFL 307


>gi|163850897|ref|YP_001638940.1| F0F1 ATP synthase subunit alpha [Methylobacterium extorquens PA1]
 gi|218529721|ref|YP_002420537.1| F0F1 ATP synthase subunit alpha [Methylobacterium extorquens CM4]
 gi|240138028|ref|YP_002962500.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           AM1]
 gi|254560589|ref|YP_003067684.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           DM4]
 gi|418058339|ref|ZP_12696314.1| ATP synthase subunit alpha [Methylobacterium extorquens DSM 13060]
 gi|226739908|sp|A9W2R3.1|ATPA_METEP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808104|sp|B7KUA4.1|ATPA_METC4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|163662502|gb|ABY29869.1| ATP synthase F1, alpha subunit [Methylobacterium extorquens PA1]
 gi|218522024|gb|ACK82609.1| ATP synthase F1, alpha subunit [Methylobacterium extorquens CM4]
 gi|240007997|gb|ACS39223.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           AM1]
 gi|254267867|emb|CAX23733.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           DM4]
 gi|373568071|gb|EHP94025.1| ATP synthase subunit alpha [Methylobacterium extorquens DSM 13060]
          Length = 509

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 81/112 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLD +TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDVSTQRLLNRGARLTELLKQPQFSPLKMEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
            G+LDKL   K+  FE++ L  ++S  +  L +++    +++     LK VV
Sbjct: 450 NGYLDKLPVGKVRAFEEQLLGTLRSKHQDWLNAVRDSKDLSDANANTLKGVV 501


>gi|330991785|ref|ZP_08315735.1| ATP synthase subunit alpha [Gluconacetobacter sp. SXCC-1]
 gi|329761253|gb|EGG77747.1| ATP synthase subunit alpha [Gluconacetobacter sp. SXCC-1]
          Length = 513

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+++EEQV V++ G 
Sbjct: 393 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLSVEEQVVVLFAGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +   K+TT+EK  L  +++S + +LESI+ + ++T+D +++L   +T F   F
Sbjct: 453 RGYIDAIPVDKVTTYEKRLLDDVRTSGKDILESIRTQRQLTKDIESRLNDFLTTFGRQF 511


>gi|319407768|emb|CBI81415.1| ATP synthase alpha chain [Bartonella sp. 1-1C]
          Length = 511

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 87/120 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQHLLNRGARLTELLKQLQFSPLKVEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S+   LLE+I ++ +IT++   ++  V+  +  NF+
Sbjct: 452 NGYLDSLAVSDVGRFEQGLLTLLRSNHEELLEAIAEQKQITDEIKRQMIIVLDYYAKNFS 511


>gi|291510238|gb|ADE10075.1| F1 ATPase alpha [Tremella fuciformis]
          Length = 545

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 84/119 (70%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM  E    +IY GV
Sbjct: 426 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGSRLTELLKQPQYNPMPTEVMAPLIYAGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   KITT+E+ F   +KS +  LLE +   G +T++ + ++K V+   +A+F
Sbjct: 486 NGMLDKVPVDKITTWERSFTEQLKSQQTALLEKLSG-GVLTKEIEEEMKKVIEAHVADF 543


>gi|347755328|ref|YP_004862892.1| ATP synthase F1 subcomplex subunit alpha [Candidatus
           Chloracidobacterium thermophilum B]
 gi|347587846|gb|AEP12376.1| ATP synthase F1 subcomplex alpha subunit [Candidatus
           Chloracidobacterium thermophilum B]
          Length = 505

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQFGSDLD ATQ+LL RG RLTE+LKQGQY PM +EEQV VI+   
Sbjct: 383 LRLELAQYRELAAFAQFGSDLDKATQRLLARGQRLTEILKQGQYSPMPLEEQVFVIWAAT 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D +  +++  FE E LA++K++   LL  I  + ++T+D  +++K     F   F
Sbjct: 443 NGYVDDIPVSEVRRFEAELLAYLKNNHATLLNDIATKKELTDDIKSRMKAATDAFKQTF 501


>gi|402848369|ref|ZP_10896632.1| ATP synthase alpha chain [Rhodovulum sp. PH10]
 gi|402501374|gb|EJW13023.1| ATP synthase alpha chain [Rhodovulum sp. PH10]
          Length = 509

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKMEEQVVVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  + +  FE+  L+  ++    +L +I+ +  + + T AK+K +V  +   F
Sbjct: 450 NGYLDPLPVSSVRAFEQGLLSLFRTKHEAVLNTIRDKRDLDDATAAKVKAIVDEYAKTF 508


>gi|254510351|ref|ZP_05122418.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium KLH11]
 gi|221534062|gb|EEE37050.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium KLH11]
          Length = 512

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK++ + +  +E   LAH++     LL+ I  E  KI  D   K+K  +  + A F
Sbjct: 452 NGYLDKIEVSDVGRYEAGLLAHLRGKHADLLKWITDEDPKIKGDASDKIKAAIDEYAATF 511


>gi|11497478|ref|NP_042268.1| H(+)-transporting ATPase, subunit 1 [Prototheca wickerhamii]
 gi|467869|gb|AAD12656.1| H(+)-transporting ATPase, subunit 1 [Prototheca wickerhamii]
          Length = 509

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDA+TQ LLNRG RLTE+LKQGQ+ PM IE+QV V+Y   
Sbjct: 390 MKLELAQYREVAAFAQFGSDLDASTQYLLNRGARLTEILKQGQFSPMPIEKQVIVLYAAT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDKL+ + I  +E+  L  I   +  +L +IK +  ++++    LKT    F   F
Sbjct: 450 KGYLDKLNISDIEKYEQTLLKEI---DPAILSTIKDKKALSDELLGTLKTFFDGFTDRF 505


>gi|404424060|ref|ZP_11005668.1| F0F1 ATP synthase subunit alpha [Mycobacterium fortuitum subsp.
           fortuitum DSM 46621]
 gi|403652343|gb|EJZ07399.1| F0F1 ATP synthase subunit alpha [Mycobacterium fortuitum subsp.
           fortuitum DSM 46621]
          Length = 549

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L+RGVRL ELLKQ QY P+A+E+QV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLDRGVRLVELLKQPQYSPLAVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD +    +T F  E L H+K+S   +L+ IK+  K++ED + KL +V+ +F   F
Sbjct: 453 QGHLDSVPAEDVTRFVDELLEHVKASHADILKGIKESKKLSEDNEEKLVSVINDFKKGF 511


>gi|349700958|ref|ZP_08902587.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter europaeus LMG
           18494]
          Length = 512

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+A+EEQV V++ G 
Sbjct: 392 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLAVEEQVVVLFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG++D +   ++TT+EK  L  +++S + +LESI+ + ++T+D +++L   +T F   F+
Sbjct: 452 RGYIDAVPVDQVTTYEKRLLDDVRTSGKDILESIRTQRQLTKDIESRLNDFLTTFGRQFS 511


>gi|254487628|ref|ZP_05100833.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
 gi|214044497|gb|EEB85135.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
          Length = 512

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+D  ++  FE   LAH++S    L+  I + + K+  + + K+K  + +F A+F
Sbjct: 452 NGFLDKIDVKQVGRFEAGLLAHLRSKHADLMTDITENDRKVKGELEDKIKAAIQSFAADF 511


>gi|410669032|ref|YP_006921403.1| ATP synthase F1 complex subunit alpha [Thermacetogenium phaeum DSM
           12270]
 gi|409106779|gb|AFV12904.1| ATP synthase F1 complex subunit alpha [Thermacetogenium phaeum DSM
           12270]
          Length = 511

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 84/115 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG R+TELLKQGQYVPM +EEQ+ VIY GV
Sbjct: 383 LRLDLAQYRELAAFAQFGSDLDKATQARLARGERMTELLKQGQYVPMPVEEQIIVIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
            G LD L    I  +EKEFL  ++S+   +L  I+++ +++++   ++  V+ +F
Sbjct: 443 NGFLDGLPVESIQEWEKEFLRFVRSNHPEILAEIREKKELSDELMERMNKVIKDF 497


>gi|83952823|ref|ZP_00961553.1| ATP synthase subunit A [Roseovarius nubinhibens ISM]
 gi|83835958|gb|EAP75257.1| ATP synthase subunit A [Roseovarius nubinhibens ISM]
          Length = 512

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+   ++  FE+  L H+++  + +L+ I  E  KI  + + KLK  +  F A+F
Sbjct: 452 NGYLDKIAVNQVGRFEEGLLNHMRTKRKDVLDWITNEDPKIKGEAEDKLKAALDEFAADF 511


>gi|294932610|ref|XP_002780357.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239890282|gb|EER12152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 554

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 81/116 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLD ATQQ L RG  LTELLKQ QY PMA E +V  IY GV
Sbjct: 428 LKLELAQYREVAAFAQFGSDLDQATQQQLLRGGILTELLKQKQYSPMATEVEVVTIYAGV 487

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           RG+LDK+   +I  FE  +L H+  +   +L++I+ E  I++ T+  LK  +  FL
Sbjct: 488 RGYLDKIAQKEIPRFETMWLEHVSQNHPDILKAIRAEHLISDTTEENLKNAMEEFL 543


>gi|49474712|ref|YP_032754.1| ATP synthase F0F1 subunit alpha [Bartonella quintana str. Toulouse]
 gi|403531011|ref|YP_006665540.1| F0F1 ATP synthase subunit alpha [Bartonella quintana RM-11]
 gi|81695985|sp|Q6FYM1.1|ATPA_BARQU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49240216|emb|CAF26684.1| ATP synthase alpha chain [Bartonella quintana str. Toulouse]
 gi|403233082|gb|AFR26825.1| F0F1 ATP synthase subunit alpha [Bartonella quintana RM-11]
          Length = 511

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S    LL++I  + +IT+D   KL  V+  +   F+
Sbjct: 452 NGYLDALAVSDVGRFEQGLLTLLRSDHPDLLQAIAHQKQITDDVKDKLIVVLNTYAKIFS 511


>gi|254460469|ref|ZP_05073885.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium HTCC2083]
 gi|206677058|gb|EDZ41545.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 512

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK++ + +  +E   LAH++S    +L+ I  K+ KI  +   KL   +T F ++F
Sbjct: 452 NGFLDKIEVSDVGRYEAGMLAHMRSKHAAILDEITNKDQKIKGEIADKLSAALTEFASDF 511


>gi|315121817|ref|YP_004062306.1| ATP synthase F0F1 subunit alpha [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495219|gb|ADR51818.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 509

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K +LAQYRE+ +FA+FGSDLD +TQ  L+RG RLTELLKQ Q+ P+ +EEQV +I+ GV
Sbjct: 390 VKGDLAQYREMLSFAKFGSDLDVSTQSFLSRGERLTELLKQPQFSPLKMEEQVVMIFSGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK++ ++I  FE   L++++SS +G+LE I+++  +T+D   KLK  +  FL +F 
Sbjct: 450 NGYLDKIEVSQIGRFESGLLSYMRSSSKGVLEDIREQKVLTDDIKNKLKGEIEVFLKDFN 509


>gi|75674628|ref|YP_317049.1| ATP synthase F0F1 subunit alpha [Nitrobacter winogradskyi Nb-255]
 gi|115312258|sp|Q3SVJ4.1|ATPA_NITWN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|74419498|gb|ABA03697.1| ATP synthase F1 subcomplex alpha subunit [Nitrobacter winogradskyi
           Nb-255]
          Length = 510

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   L+ ++     +L +I+    ++++T  KLK++V  +   F
Sbjct: 451 NGYLDPLPLGKVRAFEDGLLSLLRGQHADILNTIRDTRDLSDETAGKLKSIVEGYAKTF 509


>gi|117926734|ref|YP_867351.1| ATP synthase F1 subunit alpha [Magnetococcus marinus MC-1]
 gi|158512339|sp|A0LDA2.1|ATPA_MAGSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117610490|gb|ABK45945.1| ATP synthase F1 subcomplex alpha subunit [Magnetococcus marinus
           MC-1]
          Length = 507

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDA TQ+LL+RG RL ELLKQ QY P+++EEQV  I+ G 
Sbjct: 387 LRLDLAQYREMAAFAQFGSDLDATTQKLLHRGKRLMELLKQAQYAPLSMEEQVVSIFAGT 446

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG LD +D   +   E E L  + +    LL++I+  GK+  DT+ KL   +T  +  F
Sbjct: 447 RGFLDVVDADAVVKAELELLKQMHAKHSDLLDTIRTSGKLDADTETKLGVAITAIIKEF 505


>gi|162146518|ref|YP_001600977.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|190358174|sp|A9H9A4.1|ATPA_GLUDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161785093|emb|CAP54637.1| ATP synthase subunit alpha [Gluconacetobacter diazotrophicus PAl 5]
          Length = 513

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 87/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+A+EEQV V++ G 
Sbjct: 393 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLAVEEQVCVLFAGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +   K++++E++ LA + +  + +LESI+ E +IT+D + +L   +T+F   F 
Sbjct: 453 RGFIDAVPVDKVSSYERQLLAELHTGGKEILESIRTERQITKDNETRLTDFLTSFGRQFA 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|328545831|ref|YP_004305940.1| ATP synthase subunit alpha [Polymorphum gilvum SL003B-26A1]
 gi|326415571|gb|ADZ72634.1| ATP synthase subunit alpha [Polymorphum gilvum SL003B-26A1]
          Length = 509

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+  +EQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKTQEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LDK+   ++  FE   L  ++     LL++I ++  + +D   +L++ +  F  NF 
Sbjct: 450 NGYLDKIPVERVREFESGLLLFLRGEHADLLDAIWQKKALDDDLTGRLRSAIDTFAKNFA 509


>gi|258406334|ref|YP_003199076.1| F0F1 ATP synthase subunit alpha [Desulfohalobium retbaense DSM
           5692]
 gi|257798561|gb|ACV69498.1| ATP synthase F1, alpha subunit [Desulfohalobium retbaense DSM 5692]
          Length = 504

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQQ L RG R+ ELLKQ QY PM  EEQVAV++ G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQQKLERGARMVELLKQPQYKPMKAEEQVAVLFAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +    +  FE E+L  + +S++ +L++IK++ K+ E  + KLK  V  F   F
Sbjct: 442 RGYMDDVPTDAVRKFEDEYLEFMYNSKQDVLQAIKEQAKLDEALEEKLKAAVEEFKKGF 500


>gi|326387007|ref|ZP_08208617.1| F0F1 ATP synthase subunit alpha [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208188|gb|EGD58995.1| F0F1 ATP synthase subunit alpha [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 509

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+A EEQ  VI+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPLAFEEQTVVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++T +E E L+++++    +L  I+    + + T AK+K  +  F   F
Sbjct: 450 SGYLDSIPVNQVTQYEAELLSYLRTERADILAEIRDSKDLGDATKAKVKEALETFGKRF 508


>gi|85713716|ref|ZP_01044706.1| ATP synthase subunit A [Nitrobacter sp. Nb-311A]
 gi|85699620|gb|EAQ37487.1| ATP synthase subunit A [Nitrobacter sp. Nb-311A]
          Length = 510

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQV VI+ G 
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIWAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE   LA ++     +L +I+    ++++T  KLK +V  +   F
Sbjct: 451 NGYLDPLPLGKVRAFEDGLLALLRGKHADILNTIRDTRDLSDETAGKLKGIVEGYAKTF 509


>gi|381202425|ref|ZP_09909540.1| F0F1 ATP synthase subunit alpha [Sphingobium yanoikuyae XLDN2-5]
 gi|427410581|ref|ZP_18900783.1| ATP synthase subunit alpha [Sphingobium yanoikuyae ATCC 51230]
 gi|425711124|gb|EKU74140.1| ATP synthase subunit alpha [Sphingobium yanoikuyae ATCC 51230]
          Length = 509

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQGQ+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQGQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + +D   KLK  + +F   F
Sbjct: 450 NGYLDGIPVKDVTRYEELMLAYLRHDHPEVLTAIRDSKDLGDDAKGKLKAALDSFGKTF 508


>gi|114769418|ref|ZP_01447044.1| F0F1 ATP synthase subunit alpha [Rhodobacterales bacterium
           HTCC2255]
 gi|114550335|gb|EAU53216.1| F0F1 ATP synthase subunit alpha [Rhodobacterales bacterium
           HTCC2255]
          Length = 511

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 86/120 (71%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQQLL RG RLTELLKQ QY P+   EQV VIY G 
Sbjct: 391 IKLELAQYREMAAFAQFGSDLDASTQQLLARGERLTELLKQPQYSPLTTAEQVLVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK-KEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK++ +++  FE   L   ++S   +L+ IK  + KI  + + ++K VV +F  +F
Sbjct: 451 KGYLDKIEVSRVRAFEDGLLNFARTSHADVLDWIKTDDPKIKGEAEDRIKAVVESFSKDF 510


>gi|84683665|ref|ZP_01011568.1| ATP synthase subunit A [Maritimibacter alkaliphilus HTCC2654]
 gi|84668408|gb|EAQ14875.1| ATP synthase subunit A [Maritimibacter alkaliphilus HTCC2654]
          Length = 513

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLL RG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLARGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G LDKL  + +  FE   L H++S    LL+ I + + K+ +D   K+K  +  F A F
Sbjct: 452 NGFLDKLPVSAVAKFESGLLNHLRSKHADLLKDITENDRKVKDDLADKIKAAIEEFAAGF 511

Query: 120 T 120
           T
Sbjct: 512 T 512


>gi|296117267|ref|ZP_06835858.1| F0F1 ATP synthase subunit alpha, partial [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295976160|gb|EFG82947.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter hansenii ATCC
           23769]
          Length = 346

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+++EEQV V+Y G 
Sbjct: 226 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLSVEEQVVVLYAGT 285

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +   ++TT+EK  L   +S+ + +LESI+ + ++T+D +++L   +T F   F
Sbjct: 286 RGYIDAVPVNQVTTYEKRLLEETRSAGKDILESIRTQRQLTKDIESRLNDFLTTFGRQF 344


>gi|440903437|gb|ELR54094.1| hypothetical protein M91_17169 [Bos grunniens mutus]
          Length = 463

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 77/119 (64%), Gaps = 34/119 (28%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRL+ELLKQGQY PMAIE+Q        
Sbjct: 377 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLSELLKQGQYSPMAIEDQ-------- 428

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
                                      + LL  I+ +GKI+E+TDAKLK +VTNFLA F
Sbjct: 429 --------------------------HQALLGKIRTDGKISEETDAKLKEIVTNFLAGF 461


>gi|254501756|ref|ZP_05113907.1| ATP synthase F1, alpha subunit [Labrenzia alexandrii DFL-11]
 gi|222437827|gb|EEE44506.1| ATP synthase F1, alpha subunit [Labrenzia alexandrii DFL-11]
          Length = 509

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVIY GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKTEEQVAVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD     ++  FE+  L  ++   + LL++I ++  + +D   KLK  +  F  NF 
Sbjct: 450 NGYLDNHPVDRVKEFEEGLLLFLRGEHKELLDAIWEKKALDDDLTGKLKAALDAFAKNFA 509


>gi|114567890|ref|YP_755044.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|122317243|sp|Q0AUD1.1|ATPA_SYNWW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114338825|gb|ABI69673.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 504

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT   L RG R+TE+LKQGQY PM ++EQV  IY GV
Sbjct: 384 LRLDLAQYRELAAFAQFGSDLDKATLARLTRGERVTEILKQGQYQPMPVQEQVVSIYSGV 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   K+  FE +FL  ++S+   +L +IK  GKI + T+ KL   +  F + F
Sbjct: 444 NGYLDDIPRDKVGEFEVDFLKFMRSANADVLNAIKDTGKIDDATEQKLIKAINEFKSTF 502


>gi|374299938|ref|YP_005051577.1| ATP synthase subunit alpha [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552874|gb|EGJ49918.1| ATP synthase subunit alpha [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 502

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD ATQQ LNRG R+ ELLKQ QY P+ +EEQVAVI+ G 
Sbjct: 382 LRLDLAQYRELAAFAGFGSDLDKATQQKLNRGARMVELLKQPQYQPLPVEEQVAVIFAGG 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +    +  FE EFL  +++++  LL++I+++  + +D + KLK  +  F   F
Sbjct: 442 RGYMDDVPVLAVRKFEAEFLEFMRNAKADLLKTIREKKALDQDAEGKLKAALEEFKKGF 500


>gi|148260676|ref|YP_001234803.1| F0F1 ATP synthase subunit alpha [Acidiphilium cryptum JF-5]
 gi|326403870|ref|YP_004283952.1| ATP synthase subunit alpha [Acidiphilium multivorum AIU301]
 gi|338983814|ref|ZP_08632968.1| ATP synthase subunit alpha [Acidiphilium sp. PM]
 gi|166201649|sp|A5FZ52.1|ATPA_ACICJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146402357|gb|ABQ30884.1| ATP synthase F1 subcomplex alpha subunit [Acidiphilium cryptum
           JF-5]
 gi|325050732|dbj|BAJ81070.1| ATP synthase subunit alpha [Acidiphilium multivorum AIU301]
 gi|338207269|gb|EGO95252.1| ATP synthase subunit alpha [Acidiphilium sp. PM]
          Length = 510

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+AAFAQF SDLDA+TQ+LL RG RLTELLKQ Q+ P+ +EEQV  I+ G 
Sbjct: 391 IKLDLAQYREMAAFAQFASDLDASTQKLLARGARLTELLKQPQFKPLPVEEQVVSIFVGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD++   +I  FE + ++ +K+    +L+SI+ + +I ++T+ KL   V +F ++F
Sbjct: 451 RGYLDEVPVNRIGDFEAQLISEMKARSPEILDSIRNDREIKKETETKLVDFVKSFASSF 509


>gi|260432837|ref|ZP_05786808.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416665|gb|EEX09924.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 512

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+D + +  +E   LAH++     LL+ I  E  KI  +   K+K  +  + A F
Sbjct: 452 NGYLDKIDVSDVGRYEAGLLAHLRGKHADLLQWITDEDPKIKGEAADKIKAALDEYAATF 511

Query: 120 T 120
            
Sbjct: 512 A 512


>gi|334342196|ref|YP_004547176.1| ATP synthase F1 subunit alpha [Desulfotomaculum ruminis DSM 2154]
 gi|334093550|gb|AEG61890.1| ATP synthase F1, alpha subunit [Desulfotomaculum ruminis DSM 2154]
          Length = 501

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  LNRG R  ++LKQ QY P  +EEQV +IY  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQARLNRGARTVQILKQAQYKPYPVEEQVVIIYSAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G +D +D  +++ FE+ F+  ++SS+  +L +I+ + +I  +TDAKL+  +  F  +F
Sbjct: 442 KGLIDDIDINRVSAFEEGFINFMRSSKADILTAIRTDKEIKAETDAKLQAAIEEFKKSF 500


>gi|406699163|gb|EKD02376.1| ATP synthase alpha chain [Trichosporon asahii var. asahii CBS 8904]
          Length = 687

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM +E Q  +IY GV
Sbjct: 565 LKLYLAQYREVAAFAQFGSDLDASTRFLLNRGARLTELLKQPQYSPMPVEIQAPLIYAGV 624

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD++   +ITT+EK+F   +KS  + LL+ +   G +T + + +++ V+ + +++F
Sbjct: 625 QGLLDQVPTDQITTWEKQFTEALKSQHQDLLQKLSG-GVLTPEIEKEMRKVIEDNVSDF 682


>gi|321260106|ref|XP_003194773.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461245|gb|ADV22986.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 540

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 82/119 (68%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM  E    +IY GV
Sbjct: 421 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPMPTEVMAPLIYAGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+   KIT +EK F   +KS    LLE +   G +T++ + ++K ++   +A+F
Sbjct: 481 NGMLDKIPVEKITAWEKSFTELLKSQHGALLEKLSG-GVLTKEIEEEMKKIIDGHVADF 538


>gi|398384423|ref|ZP_10542453.1| proton translocating ATP synthase, F1 alpha subunit [Sphingobium
           sp. AP49]
 gi|397722582|gb|EJK83118.1| proton translocating ATP synthase, F1 alpha subunit [Sphingobium
           sp. AP49]
          Length = 509

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQGQ+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQGQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + +D   KLK  +  F   F
Sbjct: 450 NGYLDAIPVKDVTRYEELMLAYLRHDHPEVLTAIRDSKDLGDDAKGKLKAALDAFGKTF 508


>gi|134300983|ref|YP_001114479.1| ATP synthase F1 subunit alpha [Desulfotomaculum reducens MI-1]
 gi|189081298|sp|A4J9A1.1|ATPA_DESRM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134053683|gb|ABO51654.1| ATP synthase F1 subcomplex alpha subunit [Desulfotomaculum reducens
           MI-1]
          Length = 501

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  LNRG R  ++LKQGQY P  +EEQV VIY  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQARLNRGARTVQILKQGQYKPYPVEEQVVVIYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD ++  KI  FE  F+  ++S++  +L++I+++ +I  +TDAKL   +  F   F
Sbjct: 442 KGFLDDVELNKIGAFEDGFINFMRSNKADILKAIREQKEIKPETDAKLVAAIEEFKKTF 500


>gi|85374581|ref|YP_458643.1| F0F1 ATP synthase subunit alpha [Erythrobacter litoralis HTCC2594]
 gi|123293698|sp|Q2N8Z5.1|ATPA_ERYLH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|84787664|gb|ABC63846.1| ATP synthase alpha subunit [Erythrobacter litoralis HTCC2594]
          Length = 509

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D +   ++T +E + L+ ++S    +L++I+  GK  +DT A     +  F   F
Sbjct: 450 NGYIDDVAVDRVTEYESQMLSFMRSEHADILKTIRDTGKFEDDTKAATVAALDAFAKQF 508


>gi|347760634|ref|YP_004868195.1| ATP synthase F1 subunit alpha [Gluconacetobacter xylinus NBRC 3288]
 gi|347579604|dbj|BAK83825.1| ATP synthase F1 alpha subunit [Gluconacetobacter xylinus NBRC 3288]
          Length = 512

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+++EEQV V++ G 
Sbjct: 392 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLSVEEQVVVLFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +   K+TT+EK  L  +++S + +LESI+ + ++++D +++L   +T F   F
Sbjct: 452 RGYIDAVPVDKVTTYEKRLLDDVRTSGKDILESIRTQRQLSKDIESRLNDFLTTFGRQF 510


>gi|85709190|ref|ZP_01040256.1| ATP synthase subunit A [Erythrobacter sp. NAP1]
 gi|85690724|gb|EAQ30727.1| ATP synthase subunit A [Erythrobacter sp. NAP1]
          Length = 509

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 MKLDLAQYREMAAFAQFGSDLDAATQKLLNRGARLTELLKQKQFNPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +   ++  +E++ LA  +S    +LE+I+  GK  +DT A +   +  F   F
Sbjct: 450 NGFIDSIAVDRVNEYEEQMLAFFRSEHADVLETIRTTGKFEDDTKAAVVAGLEAFAKQF 508


>gi|349687997|ref|ZP_08899139.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter oboediens
           174Bp2]
          Length = 512

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+++EEQV V++ G 
Sbjct: 392 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPETSPLSVEEQVVVLFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +   ++TT+EK  L  +++S + +LESI+ + ++T+D +++L   +T F   F
Sbjct: 452 RGYIDAVPVDQVTTYEKRLLDDVRTSGKDILESIRTQRQLTKDIESRLNDFLTTFGRQF 510


>gi|339017953|ref|ZP_08644098.1| ATP synthase F1 alpha subunit [Acetobacter tropicalis NBRC 101654]
 gi|338752956|dbj|GAA07402.1| ATP synthase F1 alpha subunit [Acetobacter tropicalis NBRC 101654]
          Length = 510

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ Q  P+ +EEQV V+Y G 
Sbjct: 391 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPQSSPLTVEEQVVVLYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG +D +   K+  +E+  L  ++++ + +LE+I K+ ++T+DT+A+L   +T F  NF
Sbjct: 451 RGFIDGIAVDKVVAWERALLGDLQNAGKDILEAIGKDRQLTKDTEARLTEYLTTFNRNF 509


>gi|50555055|ref|XP_504936.1| YALI0F03179p [Yarrowia lipolytica]
 gi|49650806|emb|CAG77741.1| YALI0F03179p [Yarrowia lipolytica CLIB122]
          Length = 536

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 86/119 (72%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT LLKQ Q  PM+ EE V +IY GV
Sbjct: 416 LKLFLAQYREVAAFAQFGSDLDASTKQTLTRGERLTLLLKQKQASPMSSEEMVPLIYAGV 475

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D +   ++  FE EF++++ ++E  LL+ I   G+++++   KLK++  NF+ +F
Sbjct: 476 NGYIDNIPVKQVEKFEAEFVSYLHANESDLLKDIAATGELSKENLEKLKSITENFVGSF 534


>gi|319899413|ref|YP_004159510.1| ATP synthase subunit alpha [Bartonella clarridgeiae 73]
 gi|319403381|emb|CBI76945.1| ATP synthase alpha chain [Bartonella clarridgeiae 73]
          Length = 510

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 88/120 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTELLKQ Q+ P+ I+EQV VI+ GV
Sbjct: 391 IKGELAQYREMAAFAQFGSDLDASTQHLLNRGERLTELLKQLQFSPLKIQEQVVVIFAGV 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++S+   LL++I ++ +IT++   K+  V+ ++  +F+
Sbjct: 451 NGYLDSLAVSDVGRFEQGLLTLLRSNHEELLDAIAEQKQITDEIKTKMIAVLDSYAKSFS 510


>gi|401889058|gb|EJT52999.1| ATP synthase alpha chain, precursor [Trichosporon asahii var.
           asahii CBS 2479]
          Length = 536

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 88/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM +E Q  +IY GV
Sbjct: 414 LKLYLAQYREVAAFAQFGSDLDASTRFLLNRGARLTELLKQPQYSPMPVEIQAPLIYAGV 473

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD++   +ITT+EK+F   +KS  + LL+ +   G +T + + +++ V+ + +++F
Sbjct: 474 QGLLDQVPTDQITTWEKQFTEALKSQHQDLLQKLSG-GVLTPEIEKEMRKVIEDNVSDF 531


>gi|400755177|ref|YP_006563545.1| ATP synthase subunit alpha [Phaeobacter gallaeciensis 2.10]
 gi|398654330|gb|AFO88300.1| ATP synthase subunit alpha [Phaeobacter gallaeciensis 2.10]
          Length = 512

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 1/110 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLK 109
            G+LDK+D   +  +E   LAH++S  + LL+ I  E  KI  D   K+K
Sbjct: 452 NGYLDKVDVKAVGRYEAGLLAHLRSKHQDLLDWITTEDPKIKGDAADKIK 501


>gi|262199223|ref|YP_003270432.1| ATP synthase F1 subunit alpha [Haliangium ochraceum DSM 14365]
 gi|262082570|gb|ACY18539.1| ATP synthase F1, alpha subunit [Haliangium ochraceum DSM 14365]
          Length = 512

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELA +RE+AAFAQFGSDLD ATQ  L RG R+TELLKQ QY P+A+EEQV V+Y G+
Sbjct: 386 LRLELASFREMAAFAQFGSDLDKATQAKLARGERMTELLKQAQYSPLAMEEQVVVLYAGI 445

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G +D+     +  +EKE L +++S+++ +L++I+  GK+ +  D  L+  +T F   F+
Sbjct: 446 NGFIDEYPLEALGRYEKELLNYMRSAKKDVLDTIRSTGKLDDSVDKSLREALTEFAKTFS 505


>gi|409052434|ref|YP_006666393.1| ATP synthase F1 subunit alpha (mitochondrion) [Trebouxiophyceae sp.
           MX-AZ01]
 gi|402746049|gb|AFQ93748.1| ATP synthase F1 subunit alpha (mitochondrion) [Trebouxiophyceae sp.
           MX-AZ01]
          Length = 510

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ Q+ P+ IE QV ++Y   
Sbjct: 391 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEMLKQPQFSPIPIERQVVIVYAAT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD+LD + I  F++  L  I +    +L  I ++  I+E+ D KLK     F   F
Sbjct: 451 KGYLDRLDLSHILPFQQALLQEISTD---ILTEIAEKRVISEELDKKLKGFFDQFTERF 506


>gi|167628984|ref|YP_001679483.1| ATP synthase F1 subunit alpha [Heliobacterium modesticaldum Ice1]
 gi|226739892|sp|B0THN4.1|ATPA_HELMI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167591724|gb|ABZ83472.1| ATP synthase f1, alpha subunit [Heliobacterium modesticaldum Ice1]
          Length = 502

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQFGSDLD ATQ  LNRG RL E+LKQ QY PM +EEQVAVI+  V
Sbjct: 382 LRLELAQYRELAAFAQFGSDLDKATQARLNRGQRLVEILKQDQYKPMVVEEQVAVIFAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  A +  FE+ FL ++++ +  +L+ I+++  +++D  A+LK  +  F   F 
Sbjct: 442 NGYLDDIAVADVLKFEEGFLKYLRTEKAEILKEIREKKALSDDLTARLKEAIGAFKKTFV 501


>gi|395767706|ref|ZP_10448239.1| ATP synthase subunit alpha [Bartonella doshiae NCTC 12862]
 gi|395414069|gb|EJF80522.1| ATP synthase subunit alpha [Bartonella doshiae NCTC 12862]
          Length = 511

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQFSPLKTEEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  +++    LL++I  + +IT++   KL  V+  +   F+
Sbjct: 452 NGYLDALAVSDVGRFEQGLLTLLRNDHHDLLKAIADQKQITDEIKDKLTVVLNTYAKTFS 511


>gi|407984529|ref|ZP_11165143.1| ATP synthase F1, alpha subunit [Mycobacterium hassiacum DSM 44199]
 gi|407373878|gb|EKF22880.1| ATP synthase F1, alpha subunit [Mycobacterium hassiacum DSM 44199]
          Length = 549

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L+RG RL ELLKQ QY PM +EEQV  I+ GV
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYAPMPVEEQVVSIFLGV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE EFL H+++S   +L  I+  GK++++T  KL  V+  F   F
Sbjct: 453 EGHLDSVPVEDVQRFEAEFLDHVRASASEILADIRDSGKLSDETKDKLVEVINQFKRGF 511


>gi|390166322|ref|ZP_10218585.1| F0F1 ATP synthase subunit alpha [Sphingobium indicum B90A]
 gi|389590719|gb|EIM68704.1| F0F1 ATP synthase subunit alpha [Sphingobium indicum B90A]
          Length = 509

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + +D   KLK  + +F   F
Sbjct: 450 NGYLDNIPVKDVTRYEELMLAYLRHDHADVLAAIRDSKDLGDDAKGKLKAALDSFGKTF 508


>gi|294012668|ref|YP_003546128.1| F-type H+-transporting ATPase alpha chain [Sphingobium japonicum
           UT26S]
 gi|292675998|dbj|BAI97516.1| F-type H+-transporting ATPase alpha chain [Sphingobium japonicum
           UT26S]
          Length = 509

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + +D   KLK  + +F   F
Sbjct: 450 NGYLDNIPVKDVTRYEELMLAYLRHDHADVLAAIRDSKDLGDDAKGKLKAALDSFGKTF 508


>gi|315443369|ref|YP_004076248.1| ATP synthase F1 subcomplex subunit alpha [Mycobacterium gilvum
           Spyr1]
 gi|315261672|gb|ADT98413.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium gilvum
           Spyr1]
          Length = 548

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ +FA F SDLDAA++  L+RG RL ELLKQ QY P ++E+QV  I+ G 
Sbjct: 393 LRLELSQYRELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYSVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +    ++ FE+E L H+K+S   +L+ I++  K++E T+ KL  V+ +F   F+
Sbjct: 453 KGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETKKLSESTEEKLTNVINDFKKGFS 512


>gi|145222904|ref|YP_001133582.1| F0F1 ATP synthase subunit alpha [Mycobacterium gilvum PYR-GCK]
 gi|189081304|sp|A4T8K0.1|ATPA_MYCGI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145215390|gb|ABP44794.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium gilvum
           PYR-GCK]
          Length = 548

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ +FA F SDLDAA++  L+RG RL ELLKQ QY P ++E+QV  I+ G 
Sbjct: 393 LRLELSQYRELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYSVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +    ++ FE+E L H+K+S   +L+ I++  K++E T+ KL  V+ +F   F+
Sbjct: 453 KGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETKKLSESTEEKLTNVINDFKKGFS 512


>gi|260576486|ref|ZP_05844476.1| ATP synthase F1, alpha subunit [Rhodobacter sp. SW2]
 gi|259021369|gb|EEW24675.1| ATP synthase F1, alpha subunit [Rhodobacter sp. SW2]
          Length = 512

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTEL+KQ QY P++  E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDASTQALLNRGARLTELMKQPQYAPLSNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  FE+  L H++++ + LLE I K + K+  D D  ++  +  F  +F
Sbjct: 452 KGYLDKIAVKDVGRFEEGLLKHLRTNGKALLEDITKNDRKVAGDLDKAVRAQLDAFAKDF 511


>gi|374611369|ref|ZP_09684156.1| ATP synthase F1, alpha subunit [Mycobacterium tusciae JS617]
 gi|373549497|gb|EHP76164.1| ATP synthase F1, alpha subunit [Mycobacterium tusciae JS617]
          Length = 546

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ QY P A+E+QV  I+ G 
Sbjct: 393 LRLELSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQYTPYAVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +    ++ FE+E L H+K+S   +L+ I++  K+ E+T+ KL  V+  F   F+
Sbjct: 453 KGHLDSVPVEDVSRFEQEVLEHVKASHDDILKEIRETKKLPEETEEKLNDVINEFKKGFS 512


>gi|307942822|ref|ZP_07658167.1| ATP synthase F1, alpha subunit [Roseibium sp. TrichSKD4]
 gi|307773618|gb|EFO32834.1| ATP synthase F1, alpha subunit [Roseibium sp. TrichSKD4]
          Length = 509

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 80/120 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+  +EQV VIY GV
Sbjct: 390 VKGELAQYREMAAFAQFGSDLDATTQKLLNRGARLTELLKQPQFSPLKTQEQVCVIYAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L   ++  FE+  L  ++     LL++I  +  + +D   KLK  +  F  NF 
Sbjct: 450 NGYLDNLPVERVGEFEEGLLLFLRGEHAELLDAIWDKKALDDDLTGKLKAALDQFSKNFA 509


>gi|347530118|ref|YP_004836866.1| ATP synthase subunit alpha [Sphingobium sp. SYK-6]
 gi|345138800|dbj|BAK68409.1| ATP synthase subunit alpha [Sphingobium sp. SYK-6]
          Length = 509

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPLPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +    +  +E   LAH ++    +L +I+    +++D  AK+K  +  F   F
Sbjct: 450 QGYLDSVATVDVVRYEAAMLAHFRAHHADILAAIRDSRDLSDDVRAKVKDALDAFGKTF 508


>gi|254474827|ref|ZP_05088213.1| ATP synthase F1, alpha subunit [Ruegeria sp. R11]
 gi|214029070|gb|EEB69905.1| ATP synthase F1, alpha subunit [Ruegeria sp. R11]
          Length = 512

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/110 (57%), Positives = 77/110 (70%), Gaps = 1/110 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLK 109
            G+LDK+D   +  +E   LAH++   + LL+ I  E  KI  D   K+K
Sbjct: 452 NGYLDKVDVKDVGRYEAGLLAHLRGKHQDLLDWITNEDPKIKGDAADKIK 501


>gi|110680695|ref|YP_683702.1| ATP synthase F0F1 subunit alpha [Roseobacter denitrificans OCh 114]
 gi|118573488|sp|Q162S7.1|ATPA_ROSDO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109456811|gb|ABG33016.1| ATP synthase F1, alpha subunit [Roseobacter denitrificans OCh 114]
          Length = 512

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 80/120 (66%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQQLL RG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQQLLARGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G LDK+D   +  FE+  L H++S    +L+ I  E  KI  D   KLK  ++ F ++F
Sbjct: 452 NGFLDKVDVKDVGRFEEALLNHMRSKHSDVLDWITNEDPKIKGDAADKLKAAISEFASDF 511


>gi|404351567|emb|CCM09776.1| ATP synthase F1 subunit 1 (mitochondrion) [Pelargonium zonale]
          Length = 512

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 3/110 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQAQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKT 110
            G  D+L   +I  FE+E L+ IK     LL S+  +G +T++   +L T
Sbjct: 453 NGFCDRLPLDRIAEFEREILSSIKPE---LLLSLLDKGGLTKEKKDELDT 499


>gi|404351569|emb|CCM09777.1| ATP synthase F1 subunit 1 (mitochondrion) [Pelargonium inquinans]
          Length = 538

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 3/110 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQAQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKT 110
            G  D+L   +I  FE+E L+ IK     LL S+  +G +T++   +L T
Sbjct: 453 NGFCDRLPLDRIAEFEREILSSIKPE---LLLSLLDKGGLTKEKKDELDT 499


>gi|334343726|ref|YP_004552278.1| ATP synthase subunit alpha [Sphingobium chlorophenolicum L-1]
 gi|334100348|gb|AEG47772.1| ATP synthase subunit alpha [Sphingobium chlorophenolicum L-1]
          Length = 509

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + ++  AKLK  + +F   F
Sbjct: 450 NGYLDAIPVKDVTRYEELMLAYLRHDHADVLAAIRDSKDLGDEPKAKLKAALDSFGKTF 508


>gi|94495686|ref|ZP_01302266.1| ATP synthase alpha subunit [Sphingomonas sp. SKA58]
 gi|94425074|gb|EAT10095.1| ATP synthase alpha subunit [Sphingomonas sp. SKA58]
          Length = 509

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +T +E+  LA+++     +L +I+    + +D   KLK  + +F   F
Sbjct: 450 NGYLDNVAVKDVTRYEEMMLAYLRHDHPQVLAAIRDSKDLGDDAKGKLKAALDSFGKTF 508


>gi|404351571|emb|CCM09778.1| ATP synthase F1 subunit 1 (mitochondrion) [Pelargonium x hortorum]
          Length = 512

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 79/110 (71%), Gaps = 3/110 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQAQYAPLXIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKT 110
            G  D+L   +I  FE+E L+ IK     LL S+  +G +T++   +L T
Sbjct: 453 NGFCDRLPLDRIAEFEREILSSIKPE---LLLSLLDKGGLTKEKKDELDT 499


>gi|159483185|ref|XP_001699641.1| mitochondrial F1F0 ATP synthase, alpha subunit [Chlamydomonas
           reinhardtii]
 gi|1495363|emb|CAA63864.1| H(+)-transporting ATP synthase [Chlamydomonas reinhardtii]
 gi|158281583|gb|EDP07337.1| mitochondrial F1F0 ATP synthase, alpha subunit [Chlamydomonas
           reinhardtii]
          Length = 569

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 3/115 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ +L RG RLTE+LKQ Q+VPM IE+Q  V+Y   
Sbjct: 453 LKLELAQYREVAAFAQFGSDLDAATQYVLERGARLTEVLKQKQFVPMPIEQQTIVVYAAT 512

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G+LDK+   +IT  E   L H+      L + +K +GKIT + +A L   ++N 
Sbjct: 513 KGYLDKVPVNQITACEDVILKHVDPR---LFKILKAKGKITPEINAHLAQQMSNL 564


>gi|384261873|ref|YP_005417059.1| ATP synthase subunit alpha [Rhodospirillum photometricum DSM 122]
 gi|378402973|emb|CCG08089.1| ATP synthase subunit alpha [Rhodospirillum photometricum DSM 122]
          Length = 511

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 85/119 (71%), Gaps = 4/119 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQF SDLD ATQ+LL RG RLTELLKQ QY P+ +EEQV VIY G 
Sbjct: 392 IKLELAQYREMAAFAQFASDLDPATQKLLARGARLTELLKQPQYSPLKVEEQVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G++D +    +T +E + L+ ++++   +L++I+ E  ++ +T+ KL      FL +F
Sbjct: 452 KGYVDAVKLTDVTRYEAQLLSELRTAGADILDAIRTEKALSSETEDKL----VRFLGDF 506


>gi|251771546|gb|EES52123.1| ATP synthase F1, alpha subunit [Leptospirillum ferrodiazotrophum]
          Length = 500

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 85/121 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+LE+AQ+RE+AAFAQF SDLD  T+  + RG+RLTE+LKQ  Y P+ +E+Q+A+I+   
Sbjct: 380 MRLEMAQFRELAAFAQFASDLDKTTRDQIERGLRLTEILKQQHYSPLPVEKQIAIIFAVT 439

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G +DK+ P+++  FEKEF   + S    LL++I++E  +++ T A LK  +T F A+F 
Sbjct: 440 NGFIDKVAPSRVGAFEKEFHLFLDSRHGALLQTIREEKALSDATVANLKAALTEFTASFN 499

Query: 121 G 121
           G
Sbjct: 500 G 500


>gi|297493570|gb|ADI40507.1| mitochondrial H+-transporting ATP synthase F1 complex alpha subunit
           1 [Rousettus leschenaultii]
          Length = 293

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/62 (95%), Positives = 60/62 (96%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 232 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 291

Query: 61  RG 62
           RG
Sbjct: 292 RG 293


>gi|126739850|ref|ZP_01755541.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. SK209-2-6]
 gi|126719082|gb|EBA15793.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. SK209-2-6]
          Length = 512

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLL RG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLARGARLTELMKQPQYSPLTNAEIVCVIYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+D   +  +E E L H++     LL  I   + K+ ++   K+K  +  F ANF
Sbjct: 452 NGYLDKVDLKDVGRYEAELLNHLRGKHADLLADITDNDRKVKDELADKVKAALDEFAANF 511

Query: 120 T 120
            
Sbjct: 512 A 512


>gi|374340545|ref|YP_005097281.1| proton translocating ATP synthase, F1 subunit alpha [Marinitoga
           piezophila KA3]
 gi|372102079|gb|AEX85983.1| proton translocating ATP synthase, F1 alpha subunit [Marinitoga
           piezophila KA3]
          Length = 505

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 88/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFAQF ++LD +T++ L RG +L+ELLKQGQY+PM +E+Q+AV++ GV
Sbjct: 385 LRLDLAQYRELEAFAQFATELDESTRKQLIRGEKLSELLKQGQYMPMDVEDQIAVVFAGV 444

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +  + I+ FEKEFL  +KS+   +LE+IK + KI ++ +  L+  + +F   F
Sbjct: 445 NGYLDDIPTSSISKFEKEFLQFLKSNRPSILEAIKTKKKIDDELEKDLRKAIEDFKQGF 503


>gi|391348916|ref|YP_006460147.1| ATP synthase F1 subunit 1 (mitochondrion) [Mimulus guttatus]
 gi|340007641|gb|AEK26505.1| ATP synthase F1 subunit 1 (mitochondrion) [Mimulus guttatus]
          Length = 507

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 7/108 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEILKQPQYTPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK----KEGKITEDT 104
            G  D++   KI  FEK  L+ +K     LLES+K    KE K+  DT
Sbjct: 453 NGFCDRMPLDKIAQFEKMLLSTVKPE---LLESLKGNLTKEKKLEIDT 497


>gi|297493568|gb|ADI40506.1| mitochondrial H+-transporting ATP synthase F1 complex alpha subunit
           1 [Cynopterus sphinx]
          Length = 296

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/62 (95%), Positives = 60/62 (96%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY GV
Sbjct: 235 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGV 294

Query: 61  RG 62
           RG
Sbjct: 295 RG 296


>gi|327195227|ref|YP_004339009.1| ATP synthase F1 subunit alpha [Coccomyxa subellipsoidea C-169]
 gi|325070723|gb|ADY75451.1| ATP synthase F1 subunit alpha [Coccomyxa subellipsoidea C-169]
          Length = 510

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 3/119 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ Q+ P+ IE QV ++Y   
Sbjct: 391 LKLELAQYREVAAFAQFGSDLDAATQYLLNRGARLTEMLKQPQFSPIPIERQVVIVYAAT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD+L  + I  F++  L  +      +L  I ++  I++D D KLK     F   F
Sbjct: 451 KGYLDRLSLSDILPFQQALLQEVSPD---ILSEIAEKKVISDDLDKKLKEFFDGFTERF 506


>gi|402823796|ref|ZP_10873204.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. LH128]
 gi|402262666|gb|EJU12621.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. LH128]
          Length = 509

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+A EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQKQFSPLAFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+T +E E L+++ S    +L  I+      ++  +K K  +  F   F
Sbjct: 450 NGYLDALPVSKVTEYEAEMLSYMHSEHADVLALIRSTKDFGDEAKSKTKAALDAFAKQF 508


>gi|334142173|ref|YP_004535380.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium sp.
           PP1Y]
 gi|359401485|ref|ZP_09194453.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium
           pentaromativorans US6-1]
 gi|333940204|emb|CCA93562.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium sp.
           PP1Y]
 gi|357597160|gb|EHJ58910.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium
           pentaromativorans US6-1]
          Length = 509

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+A EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQKQFSPLAFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+T +E E L+ +      +LE I+      ++  AK K  +  F   F
Sbjct: 450 NGYLDALPVSKVTEYEAEMLSFMHEKHADVLELIRSTKDFGDEAKAKTKAALDAFAKQF 508


>gi|58268340|ref|XP_571326.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134113074|ref|XP_774813.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257459|gb|EAL20166.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227561|gb|AAW44019.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 540

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM  E    +IY GV
Sbjct: 421 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPMPTEVMAPLIYAGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KIT +EK F   +KS    LLE +   G +T++ + ++K ++   +A+F
Sbjct: 481 NGMLDNVPVEKITAWEKSFTELLKSQHGALLEKLGG-GVLTKEIEEEMKKIIDGHVADF 538


>gi|405121299|gb|AFR96068.1| ATPase alpha subunit [Cryptococcus neoformans var. grubii H99]
          Length = 540

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LLNRG RLTELLKQ QY PM  E    +IY GV
Sbjct: 421 LKLYLAQYREVAAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPMPTEVMAPLIYAGV 480

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   KIT +EK F   +KS    LLE +   G +T++ + ++K ++   +A+F
Sbjct: 481 NGMLDNVPVEKITAWEKSFTELLKSQHGALLEKLGG-GVLTKEIEEEMKKIIEGHVADF 538


>gi|404442950|ref|ZP_11008125.1| F0F1 ATP synthase subunit alpha [Mycobacterium vaccae ATCC 25954]
 gi|403656376|gb|EJZ11190.1| F0F1 ATP synthase subunit alpha [Mycobacterium vaccae ATCC 25954]
          Length = 548

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ +FA F SDLDAA++  L+RG RL ELLKQ QY P ++E+QV  I+ G 
Sbjct: 393 LRLELSQYRELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYSVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +    +  FE+E L H+K+S   +L+ I++  K++E+T+ KL  V+  F   F+
Sbjct: 453 KGHLDSVPVEDVARFEQEVLEHVKASHDDILKEIRETKKLSEETEEKLTNVINEFKKGFS 512


>gi|171116|gb|AAA66888.1| ATPase 1 alpha subunit [Saccharomyces cerevisiae]
          Length = 544

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 87/119 (73%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+Q L RG RLT+LLKQ QY P+A EEQ ++I  GV
Sbjct: 427 LKLFLAQYREVAAFAQFGSDLDASTKQTLVRGQRLTQLLKQNQYSPLATEEQ-SMIIAGV 485

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GH    + ++I  FE  FL+++KS+   LL  I+++G+++++  A LK+   +F+A F
Sbjct: 486 NGHSGWYELSRIGEFESSFLSYLKSNHNELLTEIREKGELSKELLASLKSATESFVATF 544


>gi|357436101|ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
 gi|355477374|gb|AES58577.1| ATP synthase subunit alpha [Medicago truncatula]
          Length = 1116

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 67/115 (58%), Positives = 79/115 (68%), Gaps = 7/115 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK----KEGKITEDTDAKLKTV 111
            G  D++   KI  +E++ L+ IK     LLES+K     E KI  D   K K V
Sbjct: 453 NGFCDRMPLDKIAQYERDILSTIKPE---LLESLKGGLTGERKIEPDAFLKEKAV 504


>gi|393719333|ref|ZP_10339260.1| F0F1 ATP synthase subunit alpha [Sphingomonas echinoides ATCC
           14820]
          Length = 509

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFSPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +    +  +E+  LA ++S    LL+ I+ +  ++++T   LKT +  F   F
Sbjct: 450 QGFLDTVPVNAVVRYEQAMLAAMRSDHADLLKDIRDKRDLSKETTEALKTALGAFSKTF 508


>gi|189499277|ref|YP_001958747.1| F0F1 ATP synthase subunit alpha [Chlorobium phaeobacteroides BS1]
 gi|226739857|sp|B3EL39.1|ATPA_CHLPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189494718|gb|ACE03266.1| ATP synthase F1, alpha subunit [Chlorobium phaeobacteroides BS1]
          Length = 526

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD AT+  L+RG RL E+LKQ QYVPMA+E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKATKAQLDRGARLVEILKQDQYVPMAVEKQVAIIFAGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD+LD   I  FE+EFL+ ++     +L SI + G++  D   +LK V   F++ F
Sbjct: 462 QGVLDQLDLQYIRRFEEEFLSLLEHKHSDILNSIAETGQMDVDVAKRLKEVAEQFMSTF 520


>gi|377806977|ref|YP_005090418.1| atp1 gene product (mitochondrion) [Boea hygrometrica]
 gi|340549482|gb|AEK53303.1| ATPase subunit 1 (mitochondrion) [Boea hygrometrica]
          Length = 507

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 7/108 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEILKQPQYTPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK----KEGKITEDT 104
            G  D++   KI+ +EK  L+ +K     LLES+K    KE K+  DT
Sbjct: 453 NGFCDRMPLDKISQYEKMLLSTVKPE---LLESLKGSLTKEKKLEIDT 497


>gi|254465980|ref|ZP_05079391.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium Y4I]
 gi|206686888|gb|EDZ47370.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium Y4I]
          Length = 512

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
            G+LDK+    ++ +E   LAH++   +  L+ I  E  KI  D   KLK  +  + A F
Sbjct: 452 NGYLDKIALKDVSRWEAGLLAHMRGKGKETLDWITNEDPKIKGDAADKLKAAIDEYAATF 511


>gi|452993867|emb|CCQ94691.1| ATP synthase (subunit alpha, component F1) [Clostridium ultunense
           Esp]
          Length = 500

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 85/119 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR++AAFAQFGS+LD  TQ+ L++G R+ E+LKQ QY PM +E+QV ++Y  V
Sbjct: 382 LKLELAQYRDLAAFAQFGSELDRDTQRRLDQGERMMEILKQPQYSPMKVEDQVVILYAVV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHL  +   KI  FEK+FL ++ ++   ++ESI++   +TEDT+ K+  V+  F  +F
Sbjct: 442 NGHLADIPIEKIAQFEKDFLNYVNNNHPEIIESIRETKDLTEDTEEKINEVIEEFKKSF 500


>gi|147679149|ref|YP_001213364.1| F0F1 ATP synthase subunit alpha [Pelotomaculum thermopropionicum
           SI]
 gi|189081306|sp|A5CYE4.1|ATPA_PELTS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146275246|dbj|BAF60995.1| F0F1-type ATP synthase, alpha subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 506

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 85/119 (71%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFG+DLD ATQ  L RG R+TELLKQGQYVPM +E+QV  I+ G 
Sbjct: 382 LRLDLAQYRELAAFAQFGADLDKATQARLIRGDRMTELLKQGQYVPMPVEDQVMSIFAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE EFL ++K+++  + E+I++ G++ +D + +L   V  F   F
Sbjct: 442 NGYLDDLPVEKVLPFEAEFLKYMKTNKPHIGETIRRTGQL-KDVEQELHAAVEAFKKEF 499


>gi|393772439|ref|ZP_10360885.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium sp. Rr
           2-17]
 gi|392722120|gb|EIZ79539.1| F-type H+-transporting ATPase subunit alpha [Novosphingobium sp. Rr
           2-17]
          Length = 509

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+A EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQKQFSPLAFEEQTLSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L  +K+T +E E L ++ +    +LE I+      ++  +K K  +  F   F
Sbjct: 450 NGYLDALPVSKVTEYEAEMLTYMHTEHADVLELIRTTKDFGDEAKSKTKAALDAFAKQF 508


>gi|407798330|ref|ZP_11145238.1| F0F1 ATP synthase subunit alpha [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407059766|gb|EKE45694.1| F0F1 ATP synthase subunit alpha [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 511

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 82/120 (68%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 391 VKLELAQYREMAAFAQFGSDLDAATQRLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
            G+LDK+    +  FEK  L ++++  R LL+ I  E  KI  +   ++K V+  +  +F
Sbjct: 451 NGYLDKIPVKDVGRFEKGLLTYLRTKHRDLLDWITTEDPKIKGEAQDRIKGVLDGYAKDF 510


>gi|393722446|ref|ZP_10342373.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. PAMC 26605]
          Length = 509

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQAQFAPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +    +  +E+  LA ++S    LL  I+ +  ++++T   LKT +  F   F
Sbjct: 450 NGFLDTVPVNAVVRYEQAMLATMRSDHADLLTDIRDKRDLSKETTEALKTALGAFSKTF 508


>gi|119358312|ref|YP_912956.1| F0F1 ATP synthase subunit alpha [Chlorobium phaeobacteroides DSM
           266]
 gi|158512400|sp|A1BJF5.1|ATPA_CHLPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119355661|gb|ABL66532.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 526

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQY+PMA+E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYIPMAVEKQVAIIFLGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +D  +I  FE+EFL  ++     +L++I + G +  DT  K+K     F+A+F 
Sbjct: 462 QGLLDAVDVTRIRKFEEEFLGLLEHKHPEVLKAIAETGTLETDTANKIKEAAQKFIASFN 521


>gi|23009398|ref|ZP_00050460.1| COG0056: F0F1-type ATP synthase, alpha subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 134

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 1/114 (0%)

Query: 7   QYREVAAFAQF-GSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLD 65
           QYRE+AAFAQ  GSDLDA+TQ+LLNRG RLTELLKQ Q+ P+ +EEQVAVIY GV G+LD
Sbjct: 20  QYREMAAFAQVSGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVAVIYAGVNGYLD 79

Query: 66  KLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           KL   K+  FE + L  ++S  + LL++I     +++++  KLK VV +   +F
Sbjct: 80  KLPVNKVRAFEDQLLGTLRSKHQDLLDTIATSKDLSDESANKLKAVVESTAKSF 133


>gi|91204909|ref|YP_537264.1| ATP synthase subunit alpha, partial [Rickettsia bellii RML369-C]
 gi|91068453|gb|ABE04175.1| ATP synthase alpha chain [Rickettsia bellii RML369-C]
          Length = 291

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F QFGSDLD+AT+  +  G RL E+LKQ QY P ++EEQ+  IY G 
Sbjct: 169 IKLELAQFRELESFLQFGSDLDSATKAQIEHGKRLVEILKQAQYHPFSVEEQIISIYAGT 228

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L  +   +I  FE++ L+ IK +++ +LESIK E +ITE+ + KLKT + NF+ +F 
Sbjct: 229 KKYLINIPVERIKEFEEKMLSEIKQNQKDILESIKSEKRITEENEQKLKTFLENFVKDFV 288


>gi|399993674|ref|YP_006573914.1| ATP synthase subunit alpha [Phaeobacter gallaeciensis DSM 17395 =
           CIP 105210]
 gi|398658229|gb|AFO92195.1| ATP synthase subunit alpha [Phaeobacter gallaeciensis DSM 17395 =
           CIP 105210]
          Length = 512

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/110 (57%), Positives = 77/110 (70%), Gaps = 1/110 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLK 109
            G+LDK+    +  +E   LAH++S  + LL+ I  E  KI  D   K+K
Sbjct: 452 NGYLDKVGVKAVGRYEAGLLAHLRSKHQDLLDWITTEDPKIKGDAADKIK 501


>gi|332295441|ref|YP_004437364.1| ATP synthase subunit alpha [Thermodesulfobium narugense DSM 14796]
 gi|332178544|gb|AEE14233.1| ATP synthase subunit alpha [Thermodesulfobium narugense DSM 14796]
          Length = 504

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 87/121 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQF SDLD AT+Q+L RG +L ELLKQ QY+  ++ ++V  I+ GV
Sbjct: 382 LRLELAQYRELAAFAQFASDLDPATKQVLTRGEKLVELLKQPQYMTFSLWKEVCSIFSGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD ++   I  FEKE L++I++  + ++E+I KE  I+++T+ KL+  +  F A F 
Sbjct: 442 RGFLDDINTEDIQRFEKELLSYIEAHNQDIIEAITKEKAISKETEEKLEKAIKEFKALFV 501

Query: 121 G 121
           G
Sbjct: 502 G 502


>gi|436841065|ref|YP_007325443.1| ATP synthase (subunit alpha, component F1) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
 gi|432169971|emb|CCO23342.1| ATP synthase (subunit alpha, component F1) [Desulfovibrio
           hydrothermalis AM13 = DSM 14728]
          Length = 502

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 79/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD ATQQ LNRG R+ ELLKQ Q+ PM + +QV  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAAFGSDLDKATQQKLNRGARMVELLKQSQFKPMNVMQQVVSLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RGH+D +    +  FE E +  I S++  +LE IK +  + +D + KLK  +  F   FT
Sbjct: 442 RGHMDDIPVTAVRKFEDELIEFIGSAKPEILEGIKTKQALDDDLEGKLKAALEEFKKGFT 501


>gi|21674843|ref|NP_662908.1| ATP synthase F0F1 subunit alpha [Chlorobium tepidum TLS]
 gi|81790591|sp|Q8KAW8.1|ATPA_CHLTE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21648064|gb|AAM73250.1| ATP synthase F1, alpha subunit [Chlorobium tepidum TLS]
          Length = 526

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 87/119 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD +T+  L+RG RL E+LKQGQY+PM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKSTKAQLDRGARLVEILKQGQYIPMPVEKQVAIIFIGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D  ++  FE+EFLA ++     +L SI ++G +  D  +KLK +   ++A+F
Sbjct: 462 QGLLDSVDLKQVRRFEEEFLAMLEQKHPEILSSIAEKGTLESDIASKLKELGEKYVASF 520


>gi|193213548|ref|YP_001999501.1| F0F1 ATP synthase subunit alpha [Chlorobaculum parvum NCIB 8327]
 gi|193087025|gb|ACF12301.1| ATP synthase F1, alpha subunit [Chlorobaculum parvum NCIB 8327]
          Length = 526

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD AT+  L+RG RL E+LKQGQY+PMA+E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKATKAQLDRGARLVEILKQGQYIPMAVEKQVAIIFVGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D   +  FE+ FL  ++     LL SI + GK+  D  +KL  V   ++A F
Sbjct: 462 QGLLDTVDIKYVRQFEESFLEMLEQKHPDLLSSIAETGKLESDMASKLTDVAQKYVAAF 520


>gi|340776389|ref|ZP_08696332.1| F0F1 ATP synthase subunit alpha [Acetobacter aceti NBRC 14818]
          Length = 511

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLD ATQ+ L RG RL ELLKQ +  P+++EEQV V++ G 
Sbjct: 391 IKLELAQYREMAAFSQFASDLDPATQKQLARGARLVELLKQPESSPLSVEEQVVVLFAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG++D +   K+  +E + LA ++S  + ++++++ E +IT+D + K+   +T+F   FT
Sbjct: 451 RGYIDSIPVEKVVPWETKLLAELRSPAKDIVQALRTERQITKDLETKIGEFLTDFNRRFT 510


>gi|157827765|ref|YP_001496829.1| ATP synthase F0F1 subunit alpha [Rickettsia bellii OSU 85-389]
 gi|166201674|sp|A8GY42.1|ATPA_RICB8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157803069|gb|ABV79792.1| F0F1 ATP synthase subunit alpha [Rickettsia bellii OSU 85-389]
          Length = 512

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F QFGSDLD+AT+  +  G RL E+LKQ QY P ++EEQ+  IY G 
Sbjct: 390 IKLELAQFRELESFLQFGSDLDSATKAQIEHGKRLVEILKQAQYHPFSVEEQIISIYAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L  +   +I  FE++ L+ IK +++ +LESIK E +ITE+ + KLKT + NF+ +F 
Sbjct: 450 KKYLINIPVERIKEFEEKMLSEIKQNQKDILESIKSEKRITEENEQKLKTFLENFVKDFV 509


>gi|116750010|ref|YP_846697.1| F0F1 ATP synthase subunit alpha [Syntrophobacter fumaroxidans MPOB]
 gi|158512352|sp|A0LLG0.1|ATPA_SYNFM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116699074|gb|ABK18262.1| ATP synthase F1, alpha subunit [Syntrophobacter fumaroxidans MPOB]
          Length = 505

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA+FGSDLD ATQ  LNRG+R+TELLKQ QY PM  E +V  +Y G 
Sbjct: 385 LRLDLAQYRELEAFAKFGSDLDKATQAQLNRGMRMTELLKQPQYQPMPAEREVMSLYAGT 444

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLD +   K+  FEKE L+ +      +L  IK++  I+E+ D K+K  +  F   F
Sbjct: 445 RGHLDNIPVEKVLEFEKEMLSFVDRKYPEILSEIKEKKIISEELDGKMKKALEEFAGVF 503


>gi|395783801|ref|ZP_10463650.1| ATP synthase subunit alpha [Bartonella melophagi K-2C]
 gi|395425923|gb|EJF92083.1| ATP synthase subunit alpha [Bartonella melophagi K-2C]
          Length = 511

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RL ELLKQ Q+ P+ ++EQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLVELLKQKQFSPLKMQEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L    +  FE+  LA ++     LL++I  + ++T+   +KL  V+  +  NF+
Sbjct: 452 NGYLDSLAVCDVGRFEQGLLALLRRDYPNLLDAIGNQKQLTDALKSKLVDVLDAYKKNFS 511


>gi|87200413|ref|YP_497670.1| ATP synthase F0F1 subunit alpha [Novosphingobium aromaticivorans
           DSM 12444]
 gi|115312259|sp|Q2G5N7.1|ATPA_NOVAD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|87136094|gb|ABD26836.1| ATP synthase F1 subcomplex alpha subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 509

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ  VI+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPLGFEEQTCVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +   ++T +E E L+ ++S    LL  I+    + ++   KL   +  F   F
Sbjct: 450 QGYLDAVPVNRVTEYEAELLSFLRSQHADLLGLIRDTKDLGDEAKGKLVAALDAFAKQF 508


>gi|443924406|gb|ELU43426.1| ATP synthase F1 [Rhizoctonia solani AG-1 IA]
          Length = 279

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 7/121 (5%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+  E QV +IY   
Sbjct: 166 LKLYLAQYREVAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPLPTEVQVPIIY--- 222

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
              LD +   +I  +E EF  H+ SS++ LL  I K G +T +T+ ++K VV   +A FT
Sbjct: 223 ---LDSIPVEQIVRWEGEFRQHLASSQKALLAEISK-GTVTAETEKEIKRVVEEHVAAFT 278

Query: 121 G 121
            
Sbjct: 279 A 279


>gi|118470627|ref|YP_889190.1| F0F1 ATP synthase subunit alpha [Mycobacterium smegmatis str. MC2
           155]
 gi|399989201|ref|YP_006569551.1| ATP synthase subunit alpha [Mycobacterium smegmatis str. MC2 155]
 gi|441213577|ref|ZP_20975823.1| ATP synthase F1, alpha subunit [Mycobacterium smegmatis MKD8]
 gi|158512473|sp|A0R202.1|ATPA_MYCS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118171914|gb|ABK72810.1| ATP synthase F1, alpha subunit [Mycobacterium smegmatis str. MC2
           155]
 gi|399233763|gb|AFP41256.1| ATP synthase subunit alpha [Mycobacterium smegmatis str. MC2 155]
 gi|440625541|gb|ELQ87387.1| ATP synthase F1, alpha subunit [Mycobacterium smegmatis MKD8]
          Length = 548

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L+RG RL ELLKQ QY P+A+EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD +    +  FE E L H+K+S   + + I++  K++E+ + KL +V+  F   F
Sbjct: 453 QGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKLVSVINEFKKGF 511


>gi|319404808|emb|CBI78409.1| ATP synthase alpha chain [Bartonella rochalimae ATCC BAA-1498]
          Length = 478

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 86/120 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ LLNRG  LTELLKQ Q+ P+ +EEQV VI+ GV
Sbjct: 359 IKGELAQYREMAAFAQFGSDLDASTQHLLNRGACLTELLKQLQFSPLKVEEQVVVIFAGV 418

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L  + +  FE+  L  ++++   LLE+I ++ +IT++   ++  V+  +  NF+
Sbjct: 419 NGYLDSLAVSDVGRFEQGLLTLLRNNHVELLEAIAEQKQITDEIKRQMVVVLDYYAKNFS 478


>gi|118619160|ref|YP_907492.1| F0F1 ATP synthase subunit alpha [Mycobacterium ulcerans Agy99]
 gi|158512388|sp|A0PUK2.1|ATPA_MYCUA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118571270|gb|ABL06021.1| ATP synthase alpha chain AtpA [Mycobacterium ulcerans Agy99]
          Length = 549

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL +I+   K+TE+T+  L  V+ +F   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEALTKVINHFKKGF 511


>gi|146278239|ref|YP_001168398.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides ATCC
           17025]
 gi|166201672|sp|A4WUM9.1|ATPA_RHOS5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145556480|gb|ABP71093.1| ATP synthase F1, alpha subunit [Rhodobacter sphaeroides ATCC 17025]
          Length = 512

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDK+    +  +E+  L H++++ R LL  I   + K+  + + K++  +  +  +F
Sbjct: 452 KGYLDKVPVKDVGRWEQGLLKHLRTNARDLLADITNNDRKVKGELENKIRAALDTYAKDF 511


>gi|347733978|ref|ZP_08867031.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. A2]
 gi|347517215|gb|EGY24407.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. A2]
          Length = 502

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD AT+Q L+RG RL ELLKQ QY PM +E+QVA +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATKQKLDRGARLVELLKQPQYQPMPVEQQVASMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG +D +    I  FE E L  IK+S+  +L  IK +  +  D + +LK  V  F   F
Sbjct: 442 RGLMDDVPVLSIRKFEAEMLDFIKNSKADILNDIKTKKALDADIEDRLKAAVAEFKKGF 500


>gi|295311633|ref|YP_003587244.1| ATPase subunit 1 [Citrullus lanatus]
 gi|259156761|gb|ACV96623.1| ATPase subunit 1 [Citrullus lanatus]
          Length = 509

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 7/120 (5%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDT----DAKLKTVVTNFL 116
            G  D++   +I+ +E+  L+ IK     LL+S+ ++G +T +     DA LK     +L
Sbjct: 453 NGFCDRMPLDRISQYERAILSRIKPE---LLQSLLEKGGLTNERKMELDAFLKESALPYL 509


>gi|183984060|ref|YP_001852351.1| F0F1 ATP synthase subunit alpha [Mycobacterium marinum M]
 gi|226739916|sp|B2HQK4.1|ATPA_MYCMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183177386|gb|ACC42496.1| ATP synthase alpha chain AtpA [Mycobacterium marinum M]
          Length = 549

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL +I+   K+TE+T+  L  V+ +F   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEALTKVINHFKKGF 511


>gi|297618431|ref|YP_003703590.1| ATP synthase F1 subunit alpha [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146268|gb|ADI03025.1| ATP synthase F1, alpha subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 502

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT   LNRG +L E+LKQGQY PM ++EQ+  IYCGV
Sbjct: 383 LRLDLAQYRELAAFAQFGSDLDKATLARLNRGEKLQEILKQGQYQPMPVQEQIVSIYCGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +   K+  FE EFL  ++SS   +L++I     +  +T+  L   +  F A F
Sbjct: 443 NGWLDDIPTDKVQQFESEFLKFVRSSYPDILKTIADTKVLDANTEKNLVKAIQEFKAIF 501


>gi|242280914|ref|YP_002993043.1| F0F1 ATP synthase subunit alpha [Desulfovibrio salexigens DSM 2638]
 gi|242123808|gb|ACS81504.1| ATP synthase F1, alpha subunit [Desulfovibrio salexigens DSM 2638]
          Length = 502

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 80/120 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD ATQQ LNRG R+ ELLKQ QY PM + EQV  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAAFGSDLDKATQQKLNRGARMVELLKQPQYKPMNVMEQVVSLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG++D+   + +  +E E    I +++  +LE IK +G I ++ + KLK  +  F   FT
Sbjct: 442 RGYMDEFPVSAVRKYEDELQEFIANAKPEILEGIKTKGAIDDEIEGKLKAALEEFNKGFT 501


>gi|383642078|ref|ZP_09954484.1| F0F1 ATP synthase subunit alpha [Sphingomonas elodea ATCC 31461]
          Length = 509

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPLPFEEQTISIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    +  FE   LAH +S    +L+ I+        T  K+K V+  F   F
Sbjct: 450 NGYLDAVAVKDVVRFEAAMLAHFRSQHAAVLDEIRTTKAFENGTRDKVKAVLDAFAKTF 508


>gi|120405284|ref|YP_955113.1| F0F1 ATP synthase subunit alpha [Mycobacterium vanbaalenii PYR-1]
 gi|158513019|sp|A1TD57.1|ATPA_MYCVP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119958102|gb|ABM15107.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium vanbaalenii
           PYR-1]
          Length = 548

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 78/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDAA++  L+RG RL ELLKQ QY P  +E+QV  IY G 
Sbjct: 393 LRLELSQYRELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYPVEDQVVAIYLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +    +  FE E L H+K+S   +L  I++  K++E+ + KL  V+  F   F+
Sbjct: 453 GGHLDSVPVEDVARFESELLEHVKASHGDILAGIRESKKLSEEAEQKLANVINEFKKGFS 512


>gi|78188123|ref|YP_378461.1| F0F1 ATP synthase subunit alpha [Chlorobium chlorochromatii CaD3]
 gi|115312241|sp|Q3AUA7.1|ATPA_CHLCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78170322|gb|ABB27418.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           chlorochromatii CaD3]
          Length = 526

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQYVPM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYVPMPVEKQVAIIFVGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D   I   E+EFLA ++     +L  I ++G +  D  +KLK + T F+A F
Sbjct: 462 QGLLDSVDLKFIRKCEEEFLAMLEMKHADILSGIAEKGTLEADVASKLKDIATKFIATF 520


>gi|414154209|ref|ZP_11410529.1| ATP synthase subunit alpha [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
 gi|411454394|emb|CCO08433.1| ATP synthase subunit alpha [Desulfotomaculum hydrothermale Lam5 =
           DSM 18033]
          Length = 501

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  LNRG R  ++LKQ QY P  +EEQV +IY  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQARLNRGARTVQILKQPQYKPYPVEEQVVIIYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD ++  +I+ FE+ F+  +++++  +L +I+ + +I  +TDAKL   +  F   F
Sbjct: 442 KGFLDDIELNRISAFEEGFINFMRTNKADILAAIRNDKEIKPETDAKLVAAIEEFKKTF 500


>gi|193214589|ref|YP_001995788.1| F0F1 ATP synthase subunit alpha [Chloroherpeton thalassium ATCC
           35110]
 gi|226739858|sp|B3QWX7.1|ATPA_CHLT3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|193088066|gb|ACF13341.1| ATP synthase F1, alpha subunit [Chloroherpeton thalassium ATCC
           35110]
          Length = 537

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA+FGSDLD ATQ  L RG RL E+LKQGQYVPMA+E+QVA+++ G 
Sbjct: 413 LRLDLAQYRELEAFAKFGSDLDKATQAQLTRGGRLVEILKQGQYVPMAVEKQVAILFVGT 472

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD L    +  FE  FL  ++   + +L +I   G++  DT  KL+ V   FL  F
Sbjct: 473 QGILDTLPANLVRKFEVAFLEMLELKHKDILNTIATAGQMDADTQKKLRQVAEQFLETF 531


>gi|254780617|ref|YP_003065030.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040294|gb|ACT57090.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 509

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 89/120 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+++F++F SDLD++TQ+ L++G RLTELLKQ Q+ P+A+EEQV +I+ G+
Sbjct: 390 VKGELAQYREMSSFSKFSSDLDSSTQKFLSKGERLTELLKQPQFSPLAMEEQVVMIFAGI 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD++  +++  FE  FL+H++ S + +LE I+K+  +T+D  +KL   +  FL +F 
Sbjct: 450 SGCLDEVAVSQVRKFETNFLSHMRVSSQDILEDIRKQKVLTDDIRSKLINEIKVFLEDFN 509


>gi|358060956|dbj|GAA93361.1| hypothetical protein E5Q_00001 [Mixia osmundae IAM 14324]
          Length = 584

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 2/102 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYR+VAAFAQFGSDLDA+T+ LLNRG RLTELLKQGQ+ PM  E  V ++Y GV
Sbjct: 419 LKLYLAQYRDVAAFAQFGSDLDASTRYLLNRGSRLTELLKQGQFQPMPFETMVPILYAGV 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE 102
            G LDK+   KIT +EK F  H+K  E  +L+ I K GK+T 
Sbjct: 479 NGKLDKVPVDKITAWEKSFRDHLKGQE-SMLKEIGK-GKMTR 518


>gi|56697996|ref|YP_168367.1| ATP synthase F0F1 subunit alpha [Ruegeria pomeroyi DSS-3]
 gi|81558337|sp|Q5LNN9.1|ATPA_SILPO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56679733|gb|AAV96399.1| ATP synthase F1, alpha subunit [Ruegeria pomeroyi DSS-3]
          Length = 512

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/120 (51%), Positives = 78/120 (65%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LDK+  A +  +E   L H++     LL  I  E  KI +D   ++K  +  + A F
Sbjct: 452 NGYLDKVALADVGRWEAGLLQHLRGKHAELLAWITNEDPKIKDDAAGRVKAALDEYAATF 511


>gi|399061344|ref|ZP_10746077.1| proton translocating ATP synthase, F1 alpha subunit
           [Novosphingobium sp. AP12]
 gi|398035796|gb|EJL29023.1| proton translocating ATP synthase, F1 alpha subunit
           [Novosphingobium sp. AP12]
          Length = 509

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+A EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQKQFSPLAFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+T++E E L ++ +    +L  I+      ++  +K K  +  F   F
Sbjct: 450 NGYLDALPVDKVTSYETEMLTYMHTEHADVLALIRTTKDFGDEAKSKTKAALDAFAKQF 508


>gi|114411|sp|P24459.1|ATPAM_PHAVU RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|169318|gb|AAB01582.1| adenosine triphosphatase [Phaseolus vulgaris]
          Length = 508

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 5/120 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G  D++   KI  +E++ L  IK     LL+S+K  G +T +   +L+  +     N+T
Sbjct: 453 NGFCDRMPLDKIPQYERDILTTIKPE---LLQSLK--GGLTSERKIELEKFLKEKAKNYT 507


>gi|319409369|emb|CBI83013.1| ATP synthase alpha chain [Bartonella schoenbuchensis R1]
          Length = 511

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RL ELLKQ Q+ P  I+EQV VI+ GV
Sbjct: 392 IKGELAQYREMAAFAQFGSDLDASTQRLLNRGARLVELLKQKQFSPFKIQEQVVVIFAGV 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L    ++ FE+  LA ++     LL++I  + ++T+    KL  ++  +  NF+
Sbjct: 452 NGYLDSLAVCDVSRFEQGLLALLRRDYPDLLDAIGDQKQLTDALKDKLVDILDAYKKNFS 511


>gi|376297345|ref|YP_005168575.1| ATP synthase F1 subunit alpha [Desulfovibrio desulfuricans ND132]
 gi|323459907|gb|EGB15772.1| ATP synthase F1, alpha subunit [Desulfovibrio desulfuricans ND132]
          Length = 502

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD AT   LNRG R+ ELLKQ QY P+ ++EQV+V+Y G 
Sbjct: 382 LRLDLAQYRELAAFASFGSDLDKATLAKLNRGARMVELLKQPQYQPLTVQEQVSVLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD +    +  FE EFL  +++++  +L+SI ++ KI +  +A LK  +  F   F+
Sbjct: 442 RGFLDDVPVDAVVRFEAEFLEFMRNAKSAVLDSIAEKEKIDDAVEASLKAAIEEFKKGFS 501


>gi|157165901|gb|ABV25026.1| ATP synthase alpha subunit [Boehmeria nivea]
          Length = 459

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 3/108 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 340 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 399

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKL 108
            G  D++   KI+ +E+  L  IK     LL+S+ ++G +T +   +L
Sbjct: 400 NGFCDRMPLEKISQYERAILNSIKQE---LLQSLLEKGGLTNERKREL 444


>gi|343426633|emb|CBQ70162.1| probable H+-transporting ATP synthase alpha chain, mitochondrial
           [Sporisorium reilianum SRZ2]
          Length = 543

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 2/119 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAAT+  LNRGVRL ELLKQ Q+VPMA E Q+ +IY GV
Sbjct: 425 LKLSLAQYRELAAFAQFGSDLDAATRSTLNRGVRLVELLKQPQFVPMATEVQIPIIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++   +I  +E  F   + S+E  LL  I K G  +E+   K+KT++T  + NF
Sbjct: 485 NGLVDEIPADRIVEWESSFREKL-STEDALLSEISK-GVPSEELFGKMKTLITEHVKNF 541


>gi|316996023|dbj|BAD83524.2| ATP synthase F1 subunit 1 (mitochondrion) [Nicotiana tabacum]
          Length = 509

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 78/110 (70%), Gaps = 3/110 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKT 110
            G  D++   +I+ +E+  L  +K     LL+S  ++G +T +   +L T
Sbjct: 453 NGFCDRMPLDRISQYERAILNSVKPE---LLQSFLEKGGLTNERKMELDT 499


>gi|337744411|ref|YP_004638573.1| protein AtpA [Paenibacillus mucilaginosus KNP414]
 gi|379718056|ref|YP_005310187.1| protein AtpA [Paenibacillus mucilaginosus 3016]
 gi|386720612|ref|YP_006186937.1| protein AtpA [Paenibacillus mucilaginosus K02]
 gi|336295600|gb|AEI38703.1| AtpA [Paenibacillus mucilaginosus KNP414]
 gi|378566728|gb|AFC27038.1| AtpA [Paenibacillus mucilaginosus 3016]
 gi|384087736|gb|AFH59172.1| protein AtpA [Paenibacillus mucilaginosus K02]
          Length = 504

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  LNRGVR  ELLKQG   P+ +E+QVA IY   
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDRATQTRLNRGVRTLELLKQGVNQPLPVEKQVAAIYVVT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGH+D L    +  FE EFLA++ S+   +L SI+    +T D +  L   +  F   F
Sbjct: 442 RGHIDDLPVQDVRRFEAEFLAYLDSNRPEILASIRDTKDLTSDNEKALVDAIGQFKKGF 500


>gi|222146420|gb|ACM46790.1| atpA [Larix sibirica]
          Length = 218

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 84/115 (73%), Gaps = 7/115 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE++KQ QY P+ IE+Q+ VI+  V
Sbjct: 104 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVMKQPQYSPLPIEKQIIVIHAAV 163

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTV 111
           +G  D++   KI+ +E+  L+ I      LL+SI ++G++T     + DA LK+V
Sbjct: 164 KGFGDRMPLDKISQYERAILSSIAPE---LLQSILEKGELTNEIEMEPDAFLKSV 215


>gi|399218432|emb|CCF75319.1| unnamed protein product [Babesia microti strain RI]
          Length = 505

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/95 (58%), Positives = 74/95 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQ+REVAAF+QFGSDLDA+TQQL+ RG  LTELLKQ QY P+    QV +I+CGV
Sbjct: 410 MKLDLAQFREVAAFSQFGSDLDASTQQLITRGRVLTELLKQDQYKPIKTPLQVCIIFCGV 469

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK 95
           +G+LDK+   +IT FE EF ++I +  + +L SI+
Sbjct: 470 QGYLDKIPIDQITKFESEFTSYITTQHQDILSSIE 504


>gi|302850070|ref|XP_002956563.1| F1F0 ATP synthase, subunit alpha, mitochondrial [Volvox carteri f.
           nagariensis]
 gi|300258090|gb|EFJ42330.1| F1F0 ATP synthase, subunit alpha, mitochondrial [Volvox carteri f.
           nagariensis]
          Length = 569

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 3/108 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ +L RG RLTE+LKQ Q+ PM IE+Q  V+Y   
Sbjct: 456 LKLELAQYREVAAFAQFGSDLDAATQYVLERGARLTEVLKQRQFNPMPIEQQTVVVYAAT 515

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKL 108
           +G+LDK+  +K+T  E   L H+      + + +K +GKIT + +A L
Sbjct: 516 KGYLDKVPVSKVTASEDVILKHVDPK---IFKVLKAKGKITPEINAHL 560


>gi|332188642|ref|ZP_08390358.1| ATP synthase F1, alpha subunit [Sphingomonas sp. S17]
 gi|332011310|gb|EGI53399.1| ATP synthase F1, alpha subunit [Sphingomonas sp. S17]
          Length = 509

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ P+  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFNPLPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G++D +  A++  +E   LA++++    +L  I+    + ++   KLK  +  F   F
Sbjct: 450 NGYIDNVPVAQVVRYEAAMLAYLRNDHADVLAMIRDTKDLGDEAKGKLKAALDQFAKIF 508


>gi|440703558|ref|ZP_20884489.1| ATP synthase F1, alpha subunit [Streptomyces turgidiscabies Car8]
 gi|440274904|gb|ELP63385.1| ATP synthase F1, alpha subunit [Streptomyces turgidiscabies Car8]
          Length = 530

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PMA E+QV  ++   
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKSQLERGQRLVELLKQAQYEPMATEDQVVSVWAAT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++  A I  FEKE L ++   E+GL+ SIK+ GK+++DT   +   +T+F   F
Sbjct: 454 TGKMDEVPVADIRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDTLTAIADGITDFKKQF 512


>gi|197103701|ref|YP_002129078.1| ATP synthase F0F1 subunit alpha [Phenylobacterium zucineum HLK1]
 gi|226739922|sp|B4RD45.1|ATPA_PHEZH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|196477121|gb|ACG76649.1| ATP synthase F1, alpha subunit [Phenylobacterium zucineum HLK1]
          Length = 510

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 84/119 (70%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFA+FGSDLD ATQ+ L RG RLTELLKQ QY P+A+EEQV  +Y G 
Sbjct: 392 IKGELAQYREMAAFAKFGSDLDVATQRQLARGERLTELLKQPQYSPLAVEEQVVSVYAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LDK+  A++  FE E L+++ +  + +L+ I+ +  +    D +LK+ +  F  +F
Sbjct: 452 RGYLDKIPTAQVGRFESELLSYMHAKHQDILDEIRTKKDLGPVED-RLKSALAAFADSF 509


>gi|229587165|ref|YP_002845666.1| F0F1 ATP synthase subunit alpha [Rickettsia africae ESF-5]
 gi|228022215|gb|ACP53923.1| ATP synthase alpha chain [Rickettsia africae ESF-5]
          Length = 533

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD+AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 413 VKLELAQFRELESFSQFGSDLDSATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 472

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 473 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 532


>gi|77462848|ref|YP_352352.1| ATP synthase F0F1 subunit alpha [Rhodobacter sphaeroides 2.4.1]
 gi|126461741|ref|YP_001042855.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides ATCC
           17029]
 gi|221638718|ref|YP_002524980.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides KD131]
 gi|332557739|ref|ZP_08412061.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides WS8N]
 gi|429208587|ref|ZP_19199834.1| ATP synthase alpha chain [Rhodobacter sp. AKP1]
 gi|124007208|sp|Q3J433.1|ATPA_RHOS4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358147|sp|A3PIB7.1|ATPA1_RHOS1 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|254808111|sp|B9KPI6.1|ATPA_RHOSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77387266|gb|ABA78451.1| F0F1-type ATP synthase alpha subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126103405|gb|ABN76083.1| ATP synthase F1, alpha subunit [Rhodobacter sphaeroides ATCC 17029]
 gi|221159499|gb|ACM00479.1| ATP synthase subunit alpha [Rhodobacter sphaeroides KD131]
 gi|332275451|gb|EGJ20766.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides WS8N]
 gi|428188350|gb|EKX56915.1| ATP synthase alpha chain [Rhodobacter sp. AKP1]
          Length = 512

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/120 (50%), Positives = 82/120 (68%), Gaps = 5/120 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQQLLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDAATQQLLNRGARLTELMKQPQYAPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-----KKEGKITEDTDAKLKTVVTNF 115
           +G+LDK+    +  +E+  L H++++ + LL  I     K +G++ +   A L T   +F
Sbjct: 452 KGYLDKVPVKDVGRWEQGLLKHLRTNAKDLLADITNNDRKVKGELEDKIRAALDTYAKDF 511


>gi|260892010|ref|YP_003238107.1| ATP synthase F1 subunit alpha [Ammonifex degensii KC4]
 gi|260864151|gb|ACX51257.1| ATP synthase F1, alpha subunit [Ammonifex degensii KC4]
          Length = 507

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFG+DLD AT   L RG RLTELLKQ QY PM +EEQV  IY GV
Sbjct: 382 LRLDLAQYRELAAFAQFGTDLDKATLARLRRGERLTELLKQDQYCPMPLEEQVMSIYTGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE EFL  +++    + E+IK++ +I  + + KL+  +  F  +F
Sbjct: 442 HGYLDDLPVDKVRDFEAEFLKFMRTQYPDVGEAIKRDLEIKPEVEEKLRQAIEEFKKDF 500


>gi|114706545|ref|ZP_01439446.1| F0F1 ATP synthase subunit alpha [Fulvimarina pelagi HTCC2506]
 gi|114537937|gb|EAU41060.1| F0F1 ATP synthase subunit alpha [Fulvimarina pelagi HTCC2506]
          Length = 509

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+ AFAQFGSDLDA+TQ+LL RG RLTELLKQ Q+ P+  EEQV VIY G 
Sbjct: 390 IKGELAQYREMEAFAQFGSDLDASTQRLLKRGQRLTELLKQPQFSPLKTEEQVVVIYAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   ++  FE+  L  +++  + +L++I ++  ++++   KLK+ V  F  NF
Sbjct: 450 NGYLDDLKVDQVGDFEEGLLNAMRNDHKDVLDAIAEKKALSDEIKDKLKSAVDKFKKNF 508


>gi|379713369|ref|YP_005301707.1| F0F1 ATP synthase subunit alpha [Rickettsia massiliae str. AZT80]
 gi|376334015|gb|AFB31247.1| F0F1 ATP synthase subunit alpha [Rickettsia massiliae str. AZT80]
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPIQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKKFV 509


>gi|194337686|ref|YP_002019480.1| F0F1 ATP synthase subunit alpha [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|226739921|sp|B4SGC7.1|ATPA_PELPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|194310163|gb|ACF44863.1| ATP synthase F1, alpha subunit [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 526

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQY+PM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYIPMPVEKQVAIIFLGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D   I  FE+EFL+ ++     LL  I   G +  DT AKLK +   F+  F
Sbjct: 462 QGLLDTVDLRFIRKFEEEFLSLLEIKHNDLLAKIASSGALEADTAAKLKDIAVKFVTVF 520


>gi|395492473|ref|ZP_10424052.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. PAMC 26617]
          Length = 509

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQAQFQPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +    +  +E+  L+ ++S    LL+ I+ +  ++++T   LK+ +  F   F
Sbjct: 450 NGFLDTVPVNAVVRYEQAMLSTMRSDHADLLKDIRDKRDLSKETTEALKSALGAFAKTF 508


>gi|190358297|sp|A8F2U2.2|ATPA_RICM5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPIQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKKFV 509


>gi|341584390|ref|YP_004764881.1| F0F1 ATP synthase subunit alpha [Rickettsia heilongjiangensis 054]
 gi|340808615|gb|AEK75203.1| F0F1 ATP synthase subunit alpha [Rickettsia heilongjiangensis 054]
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|152993356|ref|YP_001359077.1| F0F1 ATP synthase subunit alpha [Sulfurovum sp. NBC37-1]
 gi|189081326|sp|A6QB61.1|ATPA_SULNB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151425217|dbj|BAF72720.1| F0F1-type ATP synthase, alpha subunit [Sulfurovum sp. NBC37-1]
          Length = 504

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 84/121 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LA +RE+ AFAQF SDLD  T+  L RG R+ E+LKQG YVP+ +E+QV +I+ G 
Sbjct: 384 LRLDLASFRELQAFAQFASDLDDYTRSQLERGQRMVEVLKQGPYVPVPVEKQVVIIFAGA 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  + +T FE E +  +++    +L++I+ E KI++DTDA+L+  + +F  +F 
Sbjct: 444 NGYLDDIAASSVTKFEAELMPFMEAKYASVLDAIRNEKKISDDTDAQLRKAIEDFKTSFA 503

Query: 121 G 121
           G
Sbjct: 504 G 504


>gi|350273933|ref|YP_004885246.1| ATP synthase subunit A [Rickettsia japonica YH]
 gi|348593146|dbj|BAK97107.1| ATP synthase subunit A [Rickettsia japonica YH]
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|452853229|ref|YP_007494913.1| ATP synthase subunit alpha [Desulfovibrio piezophilus]
 gi|451896883|emb|CCH49762.1| ATP synthase subunit alpha [Desulfovibrio piezophilus]
          Length = 502

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 80/120 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD  TQ  LNRG R+ ELLKQ QY P  ++EQV+V+Y G 
Sbjct: 382 LRLDLAQYRELAAFASFGSDLDKGTQAKLNRGARMVELLKQPQYKPQTVQEQVSVLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LD +    +  FE EFL  + +++  +L+SI ++ KI +  +A LK  +  F   F+
Sbjct: 442 RGFLDDVPVEAVQKFEAEFLEFMNNAKSAVLDSIAEKEKIDDAVEADLKAAIEEFKKGFS 501


>gi|218887914|ref|YP_002437235.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739872|sp|B8DRD0.1|ATPA_DESVM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218758868|gb|ACL09767.1| ATP synthase F1, alpha subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 502

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD AT+Q L+RG RL ELLKQ QY PM +E+QVA +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATKQKLDRGARLVELLKQPQYQPMPVEQQVASMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG +D +    I  FE E L  +K+S+  +L  IK +  +  D + +LK  V  F   F
Sbjct: 442 RGLMDDVPVLAIRKFEAEMLDFLKNSKADILNDIKTKKALDADIEDRLKAAVAEFKKGF 500


>gi|383482085|ref|YP_005391000.1| F0F1 ATP synthase subunit alpha [Rickettsia rhipicephali str.
           3-7-female6-CWPP]
 gi|378934424|gb|AFC72927.1| F0F1 ATP synthase subunit alpha [Rickettsia rhipicephali str.
           3-7-female6-CWPP]
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPIQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKKFV 509


>gi|157964951|ref|YP_001499775.1| F0F1 ATP synthase subunit alpha [Rickettsia massiliae MTU5]
 gi|157844727|gb|ABV85228.1| ATP synthase alpha chain [Rickettsia massiliae MTU5]
          Length = 533

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 413 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 472

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 473 KKYLNDVPIQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKKFV 532


>gi|83591196|ref|YP_431205.1| ATP synthase F1 subunit alpha [Moorella thermoacetica ATCC 39073]
 gi|115312251|sp|Q2RFX7.1|ATPA_MOOTA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|83574110|gb|ABC20662.1| ATP synthase F1 subcomplex alpha subunit [Moorella thermoacetica
           ATCC 39073]
          Length = 507

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 383 LRLDLAQYRELAAFAQFGSDLDKATQARLARGERMMEILKQDQYQPMPVEEQVVVLYAAV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD L  A++  FEK+FL  +++    +L  I+++ ++ ++   +LK  + +F  +FT
Sbjct: 443 NGFLDDLPVARVRAFEKDFLRFLRNERPEVLAGIREKRQLDDNLQEQLKKSIEDFKGSFT 502


>gi|383313159|ref|YP_005365960.1| F0F1 ATP synthase subunit alpha [Candidatus Rickettsia amblyommii
           str. GAT-30V]
 gi|378931819|gb|AFC70328.1| F0F1 ATP synthase subunit alpha [Candidatus Rickettsia amblyommii
           str. GAT-30V]
          Length = 510

 Score =  118 bits (295), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|67459660|ref|YP_247284.1| ATP synthase F0F1 subunit alpha [Rickettsia felis URRWXCal2]
 gi|75535944|sp|Q4UK16.1|ATPA_RICFE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|67005193|gb|AAY62119.1| ATP synthase alpha chain [Rickettsia felis URRWXCal2]
          Length = 510

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|443492194|ref|YP_007370341.1| H(+)-transporting two-sector ATPase, alpha subunit [Mycobacterium
           liflandii 128FXT]
 gi|442584691|gb|AGC63834.1| H(+)-transporting two-sector ATPase, alpha subunit [Mycobacterium
           liflandii 128FXT]
          Length = 549

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL +I+   K+TE+T   L  V+ +F   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETVEALTKVINHFKKGF 511


>gi|34581170|ref|ZP_00142650.1| ATP synthase alpha chain [Rickettsia sibirica 246]
 gi|28262555|gb|EAA26059.1| ATP synthase alpha chain [Rickettsia sibirica 246]
          Length = 510

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|161723840|ref|NP_360874.2| ATP synthase F0F1 subunit alpha [Rickettsia conorii str. Malish 7]
 gi|20137393|sp|Q92G86.2|ATPA_RICCN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 510

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|374319779|ref|YP_005066278.1| ATP synthase subunit alpha [Rickettsia slovaca 13-B]
 gi|383751854|ref|YP_005426955.1| F0F1 ATP synthase subunit alpha [Rickettsia slovaca str. D-CWPP]
 gi|360042328|gb|AEV92710.1| ATP synthase alpha chain [Rickettsia slovaca 13-B]
 gi|379774868|gb|AFD20224.1| F0F1 ATP synthase subunit alpha [Rickettsia slovaca str. D-CWPP]
          Length = 510

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|383484533|ref|YP_005393446.1| F0F1 ATP synthase subunit alpha [Rickettsia parkeri str.
           Portsmouth]
 gi|378936887|gb|AFC75387.1| F0F1 ATP synthase subunit alpha [Rickettsia parkeri str.
           Portsmouth]
          Length = 510

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 509


>gi|372450305|ref|YP_005090487.1| ATPase subunit 1 (mitochondrion) [Lotus japonicus]
 gi|357197351|gb|AET62947.1| ATPase subunit 1 (mitochondrion) [Lotus japonicus]
          Length = 505

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 74/100 (74%), Gaps = 4/100 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKS----SERGLLESIKK 96
            G  D++   KI  +E++ L+ IK     S +G+L S +K
Sbjct: 453 NGFCDRMPLDKIAQYERDILSTIKPELLQSLKGILTSERK 492


>gi|15620371|gb|AAL03775.1| ATP synthase alpha chain [Rickettsia conorii str. Malish 7]
          Length = 533

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 413 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 472

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  F 
Sbjct: 473 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKEFV 532


>gi|404252860|ref|ZP_10956828.1| F0F1 ATP synthase subunit alpha [Sphingomonas sp. PAMC 26621]
          Length = 509

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQAQFQPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +    +  +E+  L+ ++S    LL+ I+ +  ++++T   LK+ +  F   F
Sbjct: 450 NGFLDTVPVNAVVRYEQAMLSTMRSDHADLLKDIRDKRDLSKETTEALKSALGAFSKTF 508


>gi|388890766|gb|AFK80363.1| ATPase alpha subunit (mitochondrion) [Larix griffithiana]
          Length = 507

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 7/115 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE++KQ QY P+ IE+Q+ VI+  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVMKQPQYSPLPIEKQIIVIHAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTV 111
           +G  D++   +I+ +E+  L+ I      LL+SI ++G++T     + DA LK+V
Sbjct: 453 KGFGDRMPLDRISQYERAILSSIDPE---LLQSILEKGELTNEIEMEPDAFLKSV 504


>gi|388890762|gb|AFK80361.1| ATPase alpha subunit (mitochondrion) [Larix potaninii]
 gi|388890764|gb|AFK80362.1| ATPase alpha subunit (mitochondrion) [Larix mastersiana]
          Length = 507

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 7/115 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE++KQ QY P+ IE+Q+ VI+  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVMKQPQYSPLPIEKQIIVIHAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTV 111
           +G  D++   +I+ +E+  L+ I      LL+SI ++G++T     + DA LK+V
Sbjct: 453 KGFGDRMPLDRISQYERAILSSIDPE---LLQSILEKGELTNEIEMEPDAFLKSV 504


>gi|320148078|emb|CBJ20740.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
          Length = 506

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 81/119 (68%), Gaps = 5/119 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G  D++   KI+ +E+  L  +K     LL+S+K  G +T +   +L + +     N+
Sbjct: 453 NGFCDRMPLEKISQYERTILNSVKPE---LLQSLK--GGLTNEKKMELDSFLKECALNY 506


>gi|220913085|ref|YP_002488394.1| F0F1 ATP synthase subunit alpha [Arthrobacter chlorophenolicus A6]
 gi|254807672|sp|B8HAZ1.1|ATPA_ARTCA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219859963|gb|ACL40305.1| ATP synthase F1, alpha subunit [Arthrobacter chlorophenolicus A6]
          Length = 545

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E+QV  I+ G 
Sbjct: 394 LKLELAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVEDQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +    +  FE EFL H+K  +  +L ++ +   + +DT A LK+ + +F   F 
Sbjct: 454 NGHLDDVPVEDVNRFETEFLEHLK-HKSSILTTLAQTNVMDDDTAAALKSSIIDFKKGFF 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|78356034|ref|YP_387483.1| ATP synthase F0F1 subunit alpha [Desulfovibrio alaskensis G20]
 gi|115312246|sp|Q313V8.1|ATPA_DESDG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78218439|gb|ABB37788.1| ATP synthase F1, alpha subunit [Desulfovibrio alaskensis G20]
          Length = 502

 Score =  117 bits (294), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 78/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD ATQ  LNRG RL ELLKQ QY PM   EQVA +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATQAKLNRGARLVELLKQPQYQPMPFNEQVASMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG +D +  A I  FE E++  ++ ++  +L+ + ++  I  D + ++K  +  F   FT
Sbjct: 442 RGFMDDVPVASIRKFEAEYIEFLRDAKGDILKDLDEKKAIDNDIEGRMKAALEEFKKGFT 501


>gi|162279935|ref|NP_064105.2| atp1 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
 gi|323435129|ref|YP_004222347.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
 gi|346683220|ref|YP_004842152.1| ATPase subunit 1 [Beta macrocarpa]
 gi|3410894|dbj|BAA32243.1| F1 ATPase subunit alpha [Beta vulgaris subsp. vulgaris]
 gi|148491439|dbj|BAA99499.2| ATPase subunit 1 [Beta vulgaris subsp. vulgaris]
 gi|317905683|emb|CBJ14077.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
 gi|319439862|emb|CBJ17567.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
 gi|345500138|emb|CBX24957.1| ATPase subunit 1 [Beta macrocarpa]
 gi|384939170|emb|CBL52017.1| ATPase subunit 1 (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 506

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 81/119 (68%), Gaps = 5/119 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G  D++   KI+ +E+  L  +K     LL+S+K  G +T +   +L + +     N+
Sbjct: 453 NGFCDRMPLDKISQYERTILNSVKPE---LLQSLK--GGLTNEKKMELDSFLKECALNY 506


>gi|254292527|ref|YP_003058550.1| ATP synthase F1 subunit alpha [Hirschia baltica ATCC 49814]
 gi|254041058|gb|ACT57853.1| ATP synthase F1, alpha subunit [Hirschia baltica ATCC 49814]
          Length = 510

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MK +LAQ+RE+AAFA+FGSDLD ATQ+ L RG RLT LLKQ QY P+++EEQV  IY G 
Sbjct: 391 MKSDLAQFREMAAFAKFGSDLDPATQRQLARGERLTALLKQPQYSPLSLEEQVVSIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +    +  +E E L+   ++   LL++I+ E K++ DT+ K+K ++  F   F+
Sbjct: 451 RGYLDGVKVDDVQRYEAELLSFAHANHADLLKTIRDEKKLSGDTEGKVKELIEAFNKTFS 510


>gi|543866|sp|P05493.2|ATPAM_PEA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13381|emb|CAA28964.1| unnamed protein product [Pisum sativum]
 gi|286140|dbj|BAA03524.1| F1 ATPase alpha subunit [Pisum sativum]
          Length = 507

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 3/95 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK 95
            G  D++   KI  +E++ L+ IK     LL+S+K
Sbjct: 453 NGFCDRMPLDKIAQYERDILSTIKQE---LLQSLK 484


>gi|222146320|gb|ACM46746.1| atpA [Abies sibirica]
 gi|222146322|gb|ACM46747.1| atpA [Abies sibirica]
 gi|222146324|gb|ACM46748.1| atpA [Abies sibirica]
 gi|222146326|gb|ACM46749.1| atpA [Abies sachalinensis]
 gi|222146328|gb|ACM46750.1| atpA [Abies nephrolepis]
 gi|222146330|gb|ACM46751.1| atpA [Abies sibirica]
 gi|222146332|gb|ACM46752.1| atpA [Abies sibirica]
 gi|222146334|gb|ACM46753.1| atpA [Abies nephrolepis]
 gi|222146336|gb|ACM46754.1| atpA [Abies sibirica]
 gi|222146338|gb|ACM46755.1| atpA [Abies sibirica]
 gi|222146340|gb|ACM46756.1| atpA [Abies sibirica]
 gi|222146342|gb|ACM46757.1| atpA [Abies sibirica]
          Length = 209

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 80/105 (76%), Gaps = 3/105 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE++KQ QY P+ IE+Q+ VI+  V
Sbjct: 95  LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVMKQPQYSPLPIEKQIIVIHAAV 154

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTD 105
           +G  D++   +I+ +E+  L+ I  S   LL+SI ++G++T + +
Sbjct: 155 KGFGDRMPLDRISRYERAILSSIDPS---LLQSILEKGELTHEIE 196


>gi|295311673|ref|YP_003587355.1| ATPase subunit 1 [Cucurbita pepo]
 gi|259156801|gb|ACV96662.1| ATPase subunit 1 [Cucurbita pepo]
          Length = 509

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 81/120 (67%), Gaps = 7/120 (5%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNFL 116
            G  D++   +I+ +E+   + IK     LL+S+  +G +T     + DA LK     +L
Sbjct: 453 NGFCDRMPLDRISQYERAIPSRIKPE---LLQSLFSKGGLTNERKMEPDAFLKESALPYL 509


>gi|94263074|ref|ZP_01286893.1| ATP synthase F1, alpha subunit [delta proteobacterium MLMS-1]
 gi|93456617|gb|EAT06725.1| ATP synthase F1, alpha subunit [delta proteobacterium MLMS-1]
          Length = 506

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLDAATQ  L RG RL E+LKQ QY P+ +E+QVA+IY G 
Sbjct: 382 LRLDLAQYRELAAFASFGSDLDAATQAQLTRGARLVEILKQPQYKPLPMEKQVAIIYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDKL    +  +E +   HI+ ++  +L+ +K + +I  D + KL   +  F  +F
Sbjct: 442 KGYLDKLPIEMVPDYEAQLYDHIEKNDPTILDDLKSKQEIDSDLEGKLNQALGAFGESF 500


>gi|372450254|ref|YP_005090437.1| ATPase subunit 1 (mitochondrion) [Millettia pinnata]
 gi|372450258|ref|YP_005090441.1| ATPase subunit 1 (mitochondrion) [Millettia pinnata]
 gi|357197300|gb|AET62897.1| ATPase subunit 1 (mitochondrion) [Millettia pinnata]
 gi|357197304|gb|AET62901.1| ATPase subunit 1 (mitochondrion) [Millettia pinnata]
          Length = 508

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 4/100 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKS----SERGLLESIKK 96
            G  D++   KI  +E++ L  IK     S +G+L S +K
Sbjct: 453 NGFCDRMPLEKIPQYERDILTTIKPELLQSLKGVLNSERK 492


>gi|357982|prf||1305286A ATPase alpha,F1
          Length = 507

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 3/95 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK 95
            G  D++   KI  +E++ L+ IK     LL+S+K
Sbjct: 453 NGFCDRMPLDKIAQYERDILSTIKQE---LLQSLK 484


>gi|74181742|dbj|BAE32582.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNFL 116
           G  D++   +I+ +E+   + IK     LL+S+ ++G +T     + DA LK     +L
Sbjct: 454 GFCDRMPLDRISQYERAIPSQIKPE---LLQSLLEKGGLTNERKMEPDAFLKESALPYL 509


>gi|333989947|ref|YP_004522561.1| ATP synthase subunit AtpA [Mycobacterium sp. JDM601]
 gi|333485915|gb|AEF35307.1| ATP synthase alpha chain AtpA [Mycobacterium sp. JDM601]
          Length = 549

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ QY PM +EEQV  ++ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQYAPMPVEEQVVAVFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE EFL HI++SE  +L  I++  K++E+   KL   +  F   F
Sbjct: 453 EGHLDSVPVEDVARFESEFLDHIRASESDILAGIRESKKLSEEATEKLVASIGQFKKGF 511


>gi|307101720|ref|YP_003875497.1| ATPase subunit 1 [Silene latifolia]
 gi|296040811|gb|ADG85373.1| ATPase subunit 1 [Silene latifolia]
 gi|301338015|gb|ADK73307.1| ATPase subunit 1 [Silene latifolia]
          Length = 513

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 9/122 (7%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQQQYAPLPIEKQIIVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDT----DAKLKTVVTNFL 116
            G  D++   KI+ +E+  L  +       L+S+K  G +T +     D+ LK    N+L
Sbjct: 453 NGFCDRMPLDKISQYERTILNSVNPE---FLQSLK--GGLTNEKKMELDSFLKECALNYL 507

Query: 117 AN 118
            N
Sbjct: 508 KN 509


>gi|339627105|ref|YP_004718748.1| ATP synthase F1 subunit alpha [Sulfobacillus acidophilus TPY]
 gi|339284894|gb|AEJ39005.1| ATP synthase f1, alpha subunit [Sulfobacillus acidophilus TPY]
          Length = 504

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 79/115 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD ATQ  L RG R  E+LKQ QY P+ +EEQVA+I+   
Sbjct: 384 MRLDLAQYRELAAFAQFGSDLDKATQARLARGARTVEILKQPQYQPLKVEEQVAIIFAVT 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G LD +   +I  FE+ FL ++   + GLLE+I+ E  ++++T  KL   +  F
Sbjct: 444 KGFLDDVPLERIRDFERGFLRYLHEQQAGLLETIRTEKALSDETTKKLSDAIEQF 498


>gi|357391910|ref|YP_004906751.1| putative ATP synthase subunit alpha [Kitasatospora setae KM-6054]
 gi|311898387|dbj|BAJ30795.1| putative ATP synthase subunit alpha [Kitasatospora setae KM-6054]
          Length = 524

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 79/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG R+ ELLKQGQY P  +EEQV  I+ G 
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKAQLERGARMVELLKQGQYQPFPVEEQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD++  A I  FE+EFL +++   +G+L  I + G + + T   L   +T+F   FT
Sbjct: 454 TGQLDEVPVADIRRFEREFLDNVRLEHKGILAGIVETGLLEQGTIDALTAAITSFKQGFT 513


>gi|379008512|ref|YP_005257963.1| ATP synthase F1 subcomplex subunit alpha [Sulfobacillus acidophilus
           DSM 10332]
 gi|361054774|gb|AEW06291.1| ATP synthase F1 subcomplex alpha subunit [Sulfobacillus acidophilus
           DSM 10332]
          Length = 502

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 79/115 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD ATQ  L RG R  E+LKQ QY P+ +EEQVA+I+   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATQARLARGARTVEILKQPQYQPLKVEEQVAIIFAVT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G LD +   +I  FE+ FL ++   + GLLE+I+ E  ++++T  KL   +  F
Sbjct: 442 KGFLDDVPLERIRDFERGFLRYLHEQQAGLLETIRTEKALSDETTKKLSDAIEQF 496


>gi|329939837|ref|ZP_08289138.1| ATP synthase subunit alpha [Streptomyces griseoaurantiacus M045]
 gi|329301407|gb|EGG45302.1| ATP synthase subunit alpha [Streptomyces griseoaurantiacus M045]
          Length = 554

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PM  E+QV  ++ G 
Sbjct: 419 LRLDLAQYRELEAFAAFGSDLDAASKSQLERGQRLVELLKQPQYQPMPTEDQVVSVWAGT 478

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    I  FEKE L H+   E+GL+ SIK+ GK+++DT   +   +  F   F
Sbjct: 479 TGKMDDVPVTDIRRFEKELLEHLHRKEQGLMTSIKEGGKMSDDTLQAVGDAIAEFKKQF 537


>gi|231585|sp|Q01915.1|ATPAM_SOYBN RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|22739|emb|CAA78407.1| atpA [Glycine max]
 gi|403311569|gb|AFR34317.1| ATPase subunit 1 (mitochondrion) [Glycine max]
 gi|403311573|gb|AFR34321.1| ATPase subunit 1 (mitochondrion) [Glycine max]
 gi|403311579|gb|AFR34327.1| ATPase subunit 1 (mitochondrion) [Glycine max]
          Length = 508

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 5/109 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLK 109
            G  D++   KI  +E++ L  IK     LL+S+K  G +T +   +L+
Sbjct: 453 NGFCDRMPLDKIPQYERDILTTIKPE---LLQSLK--GGLTSERKIELE 496


>gi|407013822|gb|EKE27910.1| hypothetical protein ACD_3C00130G0008 [uncultured bacterium (gcode
           4)]
          Length = 501

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+ AF+QF SDLD  T+Q L RG R+ ELLKQ  Y P+  E+QV  IY G+
Sbjct: 384 LKLSLAQYRELEAFSQFASDLDEETRQQLERGKRMVELLKQDIYSPITFEKQVCAIYAGI 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
            G+LDK++ +KI +FEK+  A +   ++ LLE+I+KE  +++D+  KLK +V
Sbjct: 444 NGYLDKIEVSKIKSFEKDLYAFL-DKDKNLLETIQKEKALSDDSVEKLKELV 494


>gi|89053538|ref|YP_508989.1| ATP synthase F0F1 subunit alpha [Jannaschia sp. CCS1]
 gi|119367955|sp|Q28TJ8.1|ATPA_JANSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|88863087|gb|ABD53964.1| ATP synthase F1 subcomplex alpha subunit [Jannaschia sp. CCS1]
          Length = 512

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQ+LL RG RLTEL+KQ QY P+   E V +I+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQRLLARGARLTELMKQPQYSPLTNAEIVTMIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G LD++  + +  FE+  L H++S+++ +L+ I  E  KI  D   KLK  +  F A+F
Sbjct: 452 NGFLDEIKVSDVGRFEEGLLNHMRSNKKDVLDWITNEDPKIKGDAADKLKAAIEEFAADF 511


>gi|385809356|ref|YP_005845752.1| F0F1 ATP synthase subunit alpha [Ignavibacterium album JCM 16511]
 gi|383801404|gb|AFH48484.1| F0F1-type ATP synthase subunit alpha [Ignavibacterium album JCM
           16511]
          Length = 515

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+ AFA+FGSDLD ATQ  L +G RL ELLKQGQY P+ +E QV  IY G 
Sbjct: 394 LKLDLAQYRELEAFAKFGSDLDKATQATLAKGSRLVELLKQGQYSPVPVERQVVSIYLGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG++D +    I  FEKE L  I      + E+IKKE  ++++T+  +K     FL  F
Sbjct: 454 RGYMDSIAVHDIKRFEKEILEFISVKYNQIFENIKKEKDLSKETEDLIKKAAEEFLPTF 512


>gi|358051055|ref|YP_004935306.1| ATPase subunit 1 (mitochondrion) [Silene noctiflora]
 gi|296040813|gb|ADG85374.1| ATPase subunit 1 [Silene noctiflora]
 gi|343526964|gb|AEM46210.1| ATPase subunit 1 (mitochondrion) [Silene noctiflora]
          Length = 506

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/113 (57%), Positives = 79/113 (69%), Gaps = 7/113 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY PM IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQQQYTPMPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLK 109
            G  D++   KI  +E   L   KS ++  LES+  +G +T+    + DA LK
Sbjct: 453 NGFCDRMPLDKIAQYEGTIL---KSVKKEFLESLDLKGGLTKTKKRELDAFLK 502


>gi|323149044|ref|YP_004222824.1| ATPase subunit 1 [Vigna radiata]
 gi|5305369|gb|AAD41619.1|AF071550_4 ATP synthase alpha chain [Vigna radiata]
 gi|308206750|gb|ADO19887.1| ATPase subunit 1 [Vigna radiata]
          Length = 508

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 5/109 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLK 109
            G  DK+   +I  +E++ L  IK     LL+S+K  G +T +   +L+
Sbjct: 453 NGFCDKMPLDQIPQYERDILTTIKPE---LLQSLK--GGLTSEIKIELE 496


>gi|359778239|ref|ZP_09281508.1| ATP synthase subunit alpha [Arthrobacter globiformis NBRC 12137]
 gi|359304156|dbj|GAB15337.1| ATP synthase subunit alpha [Arthrobacter globiformis NBRC 12137]
          Length = 545

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E QV  I+ G 
Sbjct: 394 LKLDLAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVENQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G+LD +    I+ FE EFL H+K  +  +L ++ +   + +DT A LKT + +F   F 
Sbjct: 454 QGYLDDVPVEDISRFESEFLEHLK-HKSSILTTLAQTNVLDDDTVAALKTAIVDFKKGFF 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|85858475|ref|YP_460677.1| ATP synthase F0F1 subunit alpha [Syntrophus aciditrophicus SB]
 gi|124007204|sp|Q2LQZ7.1|ATPA1_SYNAS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|85721566|gb|ABC76509.1| ATP synthase alpha chain [Syntrophus aciditrophicus SB]
          Length = 504

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+A+FAQFGSDLD ATQ  L+RGVRL E+LKQ Q+ PM++ E+V V++ G 
Sbjct: 383 LKLDLAQYRELASFAQFGSDLDKATQAQLDRGVRLVEILKQPQFQPMSLAEEVIVLFAGT 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG LDK +  KI  +E + LA++KS  + +++ I  +  I+ + + K+K  +T F + F 
Sbjct: 443 RGFLDKYEVEKIKEYEPQVLAYMKSKHQDIMQEIDDKKVISPELEQKIKEALTAFDSVFV 502


>gi|402703012|ref|ZP_10850991.1| F0F1 ATP synthase subunit alpha [Rickettsia helvetica C9P9]
          Length = 511

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAKIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+ +F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKDFV 509


>gi|354593271|ref|ZP_09011316.1| F0F1 ATP synthase subunit alpha [Commensalibacter intestini A911]
 gi|353673336|gb|EHD15030.1| F0F1 ATP synthase subunit alpha [Commensalibacter intestini A911]
          Length = 512

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+ AF+QF SDLDA+T++LL RG RLTELLKQ Q  P  +EE+V ++Y G 
Sbjct: 391 IKLDLAQYREMEAFSQFSSDLDASTRKLLERGARLTELLKQPQNSPYTMEEEVVILYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+ D++   KI +FEK+F+  I+SS   +L  I+   +I+++ + KL   + +F+  F
Sbjct: 451 RGYTDEIPVEKIASFEKQFIEVIRSSGAEILNGIRDAAQISKELEEKLVAFLKDFVLKF 509


>gi|326516490|dbj|BAJ92400.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 86/119 (72%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYREVAAFA FGSDLD AT+ LL RG RLTELLKQ QY P++ E QV +I  GV
Sbjct: 429 LKLYLAQYREVAAFASFGSDLDQATRYLLARGQRLTELLKQRQYSPISTEVQVPLIMAGV 488

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LDK+   +I  ++++F AH++++E+ LL  I K G +T++ + K+++ +  F  +F
Sbjct: 489 QGLLDKIPVERIVEWDEKFQAHLQANEQDLLSEISK-GVMTKELEPKIRSTIEKFNESF 546


>gi|320108424|ref|YP_004184014.1| ATP synthase F1 subunit alpha [Terriglobus saanensis SP1PR4]
 gi|319926945|gb|ADV84020.1| ATP synthase F1, alpha subunit [Terriglobus saanensis SP1PR4]
          Length = 515

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+AAFAQFGSDLD ATQ+ LNRG RLTELLKQ Q+ P+   +QV++++ GV
Sbjct: 383 LKLDLAQYRELAAFAQFGSDLDPATQKQLNRGKRLTELLKQKQFRPLTAAQQVSILFAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD +D  +I  FE  F A++ ++ +G+L++I  + +I ++   +L   +  F   F
Sbjct: 443 NGLLDDVDDKQIVNFEDGFHAYMATNGQGILDAITAKKQIDDEIKTQLTAKINEFKTTF 501


>gi|296282409|ref|ZP_06860407.1| F0F1 ATP synthase subunit alpha [Citromicrobium bathyomarinum
           JL354]
          Length = 509

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 4/119 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKK----EGKITEDTDAKLKTVVTNF 115
            G+LD +   ++T +E + L+ ++     +L+ I++    EG+I + T A L      F
Sbjct: 450 NGYLDSVATDRVTEYETQMLSFMRHEHADILKDIRETKKFEGEIKDRTVAALDAFAKQF 508


>gi|433609088|ref|YP_007041457.1| ATP synthase subunit alpha [Saccharothrix espanaensis DSM 44229]
 gi|407886941|emb|CCH34584.1| ATP synthase subunit alpha [Saccharothrix espanaensis DSM 44229]
          Length = 548

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 79/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+Q+RE+ AF+ F SDLDAA++  L+RG RL ELLKQ QY P+ +EEQV  IY G 
Sbjct: 393 LRLDLSQFRELEAFSAFASDLDAASRAQLDRGARLVELLKQAQYSPVPMEEQVVSIYLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GH D +  A +  FE +FL H++ S   +L SI++  K++EDT+  +   V  F   FT
Sbjct: 453 NGHYDSVPVADVRRFEADFLDHVRRSHDVILSSIRESKKLSEDTEKGIVDAVNAFKQQFT 512


>gi|259415733|ref|ZP_05739653.1| ATP synthase F1, alpha subunit [Silicibacter sp. TrichCH4B]
 gi|259347172|gb|EEW58949.1| ATP synthase F1, alpha subunit [Silicibacter sp. TrichCH4B]
          Length = 513

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 10/125 (8%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLL RG RLTEL+KQ QY P+   E V +I+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLARGARLTELMKQPQYSPLTNSEIVCIIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK------KEGKITEDTDAKLKTVVTN 114
            G+LDK+D  ++  FE E L  ++S +   L+ I       K+G+  E    K+K V+  
Sbjct: 452 NGYLDKVDVKEVGRFEAELLTFLRSKKADFLQWITDEDPKFKKGEPVE----KMKAVLDE 507

Query: 115 FLANF 119
           F A+F
Sbjct: 508 FAADF 512


>gi|421006465|ref|ZP_15469580.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0119-R]
 gi|421022423|ref|ZP_15485471.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0731]
 gi|392202217|gb|EIV27814.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0119-R]
 gi|392215120|gb|EIV40668.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0731]
          Length = 545

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ Q  P  +EEQV  IY G 
Sbjct: 390 LRLELSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYLGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE+EFL H++ S   +L  I++  K +EDT+ KL   V  F  +F
Sbjct: 450 GGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKLTNAVNAFKKSF 508


>gi|386284721|ref|ZP_10061940.1| F0F1 ATP synthase subunit alpha [Sulfurovum sp. AR]
 gi|385344124|gb|EIF50841.1| F0F1 ATP synthase subunit alpha [Sulfurovum sp. AR]
          Length = 504

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 84/121 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LA +RE+ AFAQF SDLD  T+  L RG R+ E+LKQG Y P+AIE+QV +I+ G 
Sbjct: 384 LRLDLASFRELQAFAQFASDLDDYTRGQLERGQRMVEVLKQGPYQPVAIEKQVVIIFAGA 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +  + +T FE + +  +++    +L++I+ E KI++DTD +L+  + +F A+F 
Sbjct: 444 NGYLDDIPASSVTKFEADLMPFMEAKYANILDAIRSEKKISDDTDGELRKAIEDFKASFA 503

Query: 121 G 121
           G
Sbjct: 504 G 504


>gi|420991248|ref|ZP_15454400.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0307]
 gi|392190259|gb|EIV15891.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0307]
          Length = 545

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ Q  P  +EEQV  IY G 
Sbjct: 390 LRLELSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYLGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE+EFL H++ S   +L  I++  K +EDT+ KL   V  F  +F
Sbjct: 450 GGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKLTNAVNAFKKSF 508


>gi|169628542|ref|YP_001702191.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus ATCC
           19977]
 gi|419711637|ref|ZP_14239100.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus M93]
 gi|419716572|ref|ZP_14243968.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus M94]
 gi|420863408|ref|ZP_15326801.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0303]
 gi|420867804|ref|ZP_15331189.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0726-RA]
 gi|420872237|ref|ZP_15335617.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0726-RB]
 gi|420909020|ref|ZP_15372333.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0125-R]
 gi|420915402|ref|ZP_15378707.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0125-S]
 gi|420919792|ref|ZP_15383090.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0728-S]
 gi|420926290|ref|ZP_15389575.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-1108]
 gi|420965758|ref|ZP_15428972.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0810-R]
 gi|420976636|ref|ZP_15439818.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0212]
 gi|420982016|ref|ZP_15445186.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0728-R]
 gi|420986818|ref|ZP_15449979.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0206]
 gi|421011884|ref|ZP_15474977.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0122-R]
 gi|421016802|ref|ZP_15479869.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0122-S]
 gi|421028007|ref|ZP_15491044.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0930-R]
 gi|421034116|ref|ZP_15497138.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0930-S]
 gi|421038743|ref|ZP_15501754.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0116-R]
 gi|421042593|ref|ZP_15505598.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0116-S]
 gi|226739914|sp|B1MLW0.1|ATPA_MYCA9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169240509|emb|CAM61537.1| ATP synthase alpha chain AtpA [Mycobacterium abscessus]
 gi|382938959|gb|EIC63288.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus M93]
 gi|382940858|gb|EIC65180.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus M94]
 gi|392073207|gb|EIT99047.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0726-RA]
 gi|392073928|gb|EIT99766.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0303]
 gi|392076426|gb|EIU02259.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0726-RB]
 gi|392121394|gb|EIU47159.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0125-R]
 gi|392123086|gb|EIU48848.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0125-S]
 gi|392133797|gb|EIU59539.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0728-S]
 gi|392138698|gb|EIU64431.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-1108]
 gi|392170895|gb|EIU96572.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0212]
 gi|392174034|gb|EIU99700.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 6G-0728-R]
 gi|392188235|gb|EIV13874.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0206]
 gi|392210288|gb|EIV35858.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0122-R]
 gi|392215902|gb|EIV41449.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0122-S]
 gi|392226957|gb|EIV52471.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0116-R]
 gi|392230657|gb|EIV56167.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0930-S]
 gi|392231913|gb|EIV57417.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0930-R]
 gi|392241659|gb|EIV67147.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 4S-0116-S]
 gi|392257746|gb|EIV83195.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 3A-0810-R]
          Length = 548

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ Q  P  +EEQV  IY G 
Sbjct: 393 LRLELSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE+EFL H++ S   +L  I++  K +EDT+ KL   V  F  +F
Sbjct: 453 GGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKLTNAVNAFKKSF 511


>gi|365869430|ref|ZP_09408977.1| F0F1 ATP synthase subunit alpha [Mycobacterium massiliense CCUG
           48898 = JCM 15300]
 gi|397679008|ref|YP_006520543.1| ATP synthase subunit alpha [Mycobacterium massiliense str. GO 06]
 gi|414582862|ref|ZP_11440002.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-1215]
 gi|418249131|ref|ZP_12875453.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus 47J26]
 gi|418419685|ref|ZP_12992868.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus subsp.
           bolletii BD]
 gi|420876729|ref|ZP_15340101.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0304]
 gi|420882071|ref|ZP_15345435.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0421]
 gi|420888372|ref|ZP_15351726.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0422]
 gi|420893981|ref|ZP_15357323.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0708]
 gi|420898549|ref|ZP_15361885.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0817]
 gi|420903894|ref|ZP_15367215.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-1212]
 gi|420930595|ref|ZP_15393871.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-151-0930]
 gi|420938467|ref|ZP_15401736.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-152-0914]
 gi|420940847|ref|ZP_15404109.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-153-0915]
 gi|420945359|ref|ZP_15408612.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-154-0310]
 gi|420951109|ref|ZP_15414355.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0626]
 gi|420955280|ref|ZP_15418519.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0107]
 gi|420960883|ref|ZP_15424111.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-1231]
 gi|420970935|ref|ZP_15434132.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0921]
 gi|420997084|ref|ZP_15460224.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           2B-0912-R]
 gi|421001518|ref|ZP_15464648.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           2B-0912-S]
 gi|421048290|ref|ZP_15511286.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense CCUG
           48898 = JCM 15300]
 gi|353450786|gb|EHB99180.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus 47J26]
 gi|363998887|gb|EHM20093.1| F0F1 ATP synthase subunit alpha [Mycobacterium massiliense CCUG
           48898 = JCM 15300]
 gi|364001315|gb|EHM22511.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus subsp.
           bolletii BD]
 gi|392090406|gb|EIU16219.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0304]
 gi|392091126|gb|EIU16937.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0421]
 gi|392092932|gb|EIU18737.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0422]
 gi|392102571|gb|EIU28358.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0708]
 gi|392107790|gb|EIU33572.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0817]
 gi|392109152|gb|EIU34930.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-1212]
 gi|392118014|gb|EIU43782.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-1215]
 gi|392139613|gb|EIU65345.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-151-0930]
 gi|392143982|gb|EIU69707.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-152-0914]
 gi|392151634|gb|EIU77342.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-153-0915]
 gi|392158567|gb|EIU84263.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           1S-154-0310]
 gi|392160886|gb|EIU86577.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0626]
 gi|392171907|gb|EIU97580.1| ATP synthase F1, alpha subunit [Mycobacterium abscessus 5S-0921]
 gi|392189328|gb|EIV14962.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           2B-0912-R]
 gi|392200336|gb|EIV25942.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense
           2B-0912-S]
 gi|392242455|gb|EIV67942.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense CCUG
           48898]
 gi|392253948|gb|EIV79415.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-1231]
 gi|392255808|gb|EIV81269.1| ATP synthase F1, alpha subunit [Mycobacterium massiliense 2B-0107]
 gi|395457273|gb|AFN62936.1| ATP synthase subunit alpha [Mycobacterium massiliense str. GO 06]
          Length = 548

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ Q  P  +EEQV  IY G 
Sbjct: 393 LRLELSQYRELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE+EFL H++ S   +L  I++  K +EDT+ KL   V  F  +F
Sbjct: 453 GGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKLTNAVNAFKKSF 511


>gi|189183875|ref|YP_001937660.1| ATP synthase alpha chain [Orientia tsutsugamushi str. Ikeda]
 gi|226739920|sp|B3CSS9.1|ATPA_ORITI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189180646|dbj|BAG40426.1| ATP synthase alpha chain [Orientia tsutsugamushi str. Ikeda]
          Length = 512

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 79/116 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQY E+ AF+QFG+DLD+++ QL+NRG RL+ELLKQ QY P ++EEQ+ V++ G+
Sbjct: 390 VKLELAQYHEMEAFSQFGADLDSSSMQLINRGRRLSELLKQSQYCPFSVEEQIIVLFAGI 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G+LDK+  +K+  FE   L H +     ++  I    KITE   +KL  ++  F+
Sbjct: 450 NGYLDKVAVSKVKEFESNMLEHFRIHNPDIMNEIISTKKITEIISSKLHQILQEFV 505


>gi|322434784|ref|YP_004216996.1| ATP synthase F1 subunit alpha [Granulicella tundricola MP5ACTX9]
 gi|321162511|gb|ADW68216.1| ATP synthase F1, alpha subunit [Granulicella tundricola MP5ACTX9]
          Length = 515

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+AAF+QFGSDLD  TQ  LNRG RL ELLKQ QY P++ E+QVA+IY GV
Sbjct: 383 LKLDLAQYRELAAFSQFGSDLDKVTQNQLNRGARLVELLKQPQYKPLSAEKQVAIIYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD ++   +  FE  F  +++S +  +L  I  +  + +D  A+LK  + ++   F
Sbjct: 443 NGLLDDVEVKDLRAFEDGFYPYLESVQPAILTDIATKKALDDDLKARLKAAILDYKGGF 501


>gi|378721880|ref|YP_005286767.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str.
           Colombia]
 gi|376326904|gb|AFB24143.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str.
           Colombia]
          Length = 510

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDIPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 509


>gi|78044529|ref|YP_361340.1| ATP synthase F0F1 subunit alpha [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|115312240|sp|Q3A944.1|ATPA_CARHZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77996644|gb|ABB15543.1| ATP synthase F1, alpha subunit [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 501

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT   L RG RL ELLKQ QY PM +EEQV  I+  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATLARLTRGERLVELLKQDQYKPMPVEEQVMAIFAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L   K+  FE EFL  ++++   + E I+ +G +T++  ++LK+ +  F   F
Sbjct: 442 NGYLDDLPVEKVRPFEAEFLKFMRANYPQIGEEIRTKGVLTDELTSRLKSAIEEFKKTF 500


>gi|254382326|ref|ZP_04997686.1| ATP synthase subunit A [Streptomyces sp. Mg1]
 gi|194341231|gb|EDX22197.1| ATP synthase subunit A [Streptomyces sp. Mg1]
          Length = 531

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQGQY PM +EEQV  ++ G 
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKASLERGKRLVELLKQGQYQPMPVEEQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    I  FE E L H++   + LL SI   GK+++DT   +   +  F   F
Sbjct: 454 TGKMDDVPVNDIRRFESELLEHLRRERKDLLTSISDGGKMSDDTLGSIADAIAAFKQQF 512


>gi|423076072|ref|ZP_17064786.1| ATP synthase F1, alpha subunit [Desulfitobacterium hafniense DP7]
 gi|361852889|gb|EHL05087.1| ATP synthase F1, alpha subunit [Desulfitobacterium hafniense DP7]
          Length = 502

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 83/121 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD  TQ  L RG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKITQMRLTRGERMMEILKQKQYEPMVVEEQVVVLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +   KI +FE+E+L  +++++  LL  I+ E  + ++ +A+++  +T     F 
Sbjct: 442 KGFLDDIPVDKIKSFEEEYLRTMRTTKADLLAKIRTEKALNDELNAEIEKAITEVKEGFL 501

Query: 121 G 121
           G
Sbjct: 502 G 502


>gi|389843918|ref|YP_006345998.1| proton translocating ATP synthase, F1 subunit alpha [Mesotoga prima
           MesG1.Ag.4.2]
 gi|387858664|gb|AFK06755.1| proton translocating ATP synthase, F1 alpha subunit [Mesotoga prima
           MesG1.Ag.4.2]
          Length = 504

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +++ELAQYR++ +FAQF ++LD AT+  L RG +LTELLKQ QYVPM +EEQV V+Y G 
Sbjct: 382 LRIELAQYRDLLSFAQFATELDKATRDQLTRGEKLTELLKQDQYVPMPVEEQVVVLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD LD ++++TFE   L  +++S   +L SI+++  I E+T+  LK  +   L  F
Sbjct: 442 KGYLDDLDTSRVSTFETTLLKTLRASYSNVLASIREKKVIEEETEKLLKKAIEETLKLF 500


>gi|219670789|ref|YP_002461224.1| ATP synthase F0F1 subunit alpha [Desulfitobacterium hafniense
           DCB-2]
 gi|254807693|sp|B8FZ36.1|ATPA_DESHD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219541049|gb|ACL22788.1| ATP synthase F1, alpha subunit [Desulfitobacterium hafniense DCB-2]
          Length = 502

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 83/121 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD  TQ  L RG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKITQMRLTRGERMMEILKQKQYEPMVVEEQVVVLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +   KI +FE+E+L  +++++  LL  I+ E  + ++ +A+++  +T     F 
Sbjct: 442 KGFLDDIPVDKIKSFEEEYLRTMRTTKADLLAKIRTEKALNDELNAEIEKAITEVKEGFL 501

Query: 121 G 121
           G
Sbjct: 502 G 502


>gi|395774921|ref|ZP_10455436.1| F0F1 ATP synthase subunit alpha [Streptomyces acidiscabies 84-104]
          Length = 527

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PMA E+QV  I+ G 
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKAQLERGSRLVELLKQAQYQPMATEDQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++    I  FEKE L ++   E+GL+ SIK+  K++ DT   +   V  F   F
Sbjct: 454 NGKMDEVPVVDIRRFEKELLEYLHRKEQGLMTSIKEGAKMSNDTIQAIDDAVAEFKKQF 512


>gi|375140913|ref|YP_005001562.1| proton translocating ATP synthase, F1 alpha subunit [Mycobacterium
           rhodesiae NBB3]
 gi|359821534|gb|AEV74347.1| proton translocating ATP synthase, F1 alpha subunit [Mycobacterium
           rhodesiae NBB3]
          Length = 547

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 79/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LEL+QYRE+ +FA F SDLDAA++  L+RG RL ELLKQ QY P  +E QV  I+ G 
Sbjct: 393 LRLELSQYRELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYPVENQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            GHLD +    +  FE+E L H+K+S   +L+ I++  K++E+ + KL  V+  F   F+
Sbjct: 453 GGHLDSVPIEDVARFEQEVLEHVKASHEDILKGIRESKKLSEEDEEKLSDVINEFKKGFS 512


>gi|379019680|ref|YP_005295914.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hlp#2]
 gi|376332260|gb|AFB29494.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hlp#2]
          Length = 510

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 509


>gi|157829069|ref|YP_001495311.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|378723225|ref|YP_005288111.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str.
           Arizona]
 gi|378724580|ref|YP_005289464.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hauke]
 gi|379015873|ref|YP_005292108.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Brazil]
 gi|379018365|ref|YP_005294600.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hino]
 gi|166201676|sp|A8GTS8.1|ATPA_RICRS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358298|sp|B0BVB8.2|ATPA_RICRO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157801550|gb|ABV76803.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|376324397|gb|AFB21637.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Brazil]
 gi|376328249|gb|AFB25487.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str.
           Arizona]
 gi|376330931|gb|AFB28167.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hino]
 gi|376333595|gb|AFB30828.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Hauke]
          Length = 510

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 509


>gi|359324401|gb|EHK62679.1| hypothetical protein M3S_K21, partial (mitochondrion) [Sorghum
           bicolor]
          Length = 311

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 7/118 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 192 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 251

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNF 115
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK    N 
Sbjct: 252 GFCDRMPLDRISQYEKNILSTINPE---LLKSFLEKGGLTNERKMEPDASLKESALNL 306


>gi|451982237|ref|ZP_21930558.1| ATP synthase, F1 complex, alpha subunit [Nitrospina gracilis 3/211]
 gi|451760530|emb|CCQ91840.1| ATP synthase, F1 complex, alpha subunit [Nitrospina gracilis 3/211]
          Length = 501

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L RG RL ELLKQ QY P++  +QV  ++ GV
Sbjct: 382 LRLDLAQYREMAAFAQFGSDLDPATQAQLARGERLVELLKQPQYQPLSAVQQVVSLFTGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RGHLD +    I  FE+ FL  ++   + +L++I+KE K++++T+ +L   V  F   F
Sbjct: 442 RGHLDDIKVRDIRRFEEGFLNFMEEKHKDILDTIEKEKKLSDETEQELTAAVKEFKGLF 500


>gi|165933795|ref|YP_001650584.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Iowa]
 gi|165908882|gb|ABY73178.1| ATP synthase alpha chain [Rickettsia rickettsii str. Iowa]
          Length = 560

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 440 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYNPFPVEEQIVSIYVGT 499

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 500 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 559


>gi|115278595|ref|YP_762487.1| ATPase subunit 1 [Tripsacum dactyloides]
 gi|114432086|gb|ABI74635.1| ATPase subunit 1 (mitochondrion) [Tripsacum dactyloides]
          Length = 508

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 7/118 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNF 115
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK    N 
Sbjct: 454 GFCDRMPLDRISQYEKNILSTINPE---LLKSFLEKGGLTNERKMEPDASLKESALNL 508


>gi|212703960|ref|ZP_03312088.1| hypothetical protein DESPIG_02013 [Desulfovibrio piger ATCC 29098]
 gi|212672663|gb|EEB33146.1| ATP synthase F1, alpha subunit [Desulfovibrio piger ATCC 29098]
          Length = 502

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 77/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD AT+  L RG RL ELLKQ QY PM  +EQVA IY   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATKAKLERGARLVELLKQPQYQPMPAQEQVASIYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           RG++D +   +I  FE E LA ++ + + +L++IK +  I E  +  L   +T F
Sbjct: 442 RGYMDDVPVDQIRRFESEMLAFMRDTRKDVLDAIKDKKVIDEAVEKALNEAITAF 496


>gi|115278526|ref|YP_762326.1| ATPase subunit 1 [Sorghum bicolor]
 gi|114309647|gb|ABI60864.1| ATPase subunit 1 (mitochondrion) [Sorghum bicolor]
          Length = 513

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 7/118 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNF 115
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK    N 
Sbjct: 454 GFCDRMPLDRISQYEKNILSTINPE---LLKSFLEKGGLTNERKMEPDASLKESALNL 508


>gi|84500102|ref|ZP_00998368.1| ATP synthase subunit A [Oceanicola batsensis HTCC2597]
 gi|84392036|gb|EAQ04304.1| ATP synthase subunit A [Oceanicola batsensis HTCC2597]
          Length = 512

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 80/120 (66%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQRLLNRGARLTELMKQPQYSPLTNAEIVVVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEG-KITEDTDAKLKTVVTNFLANF 119
            G+LD L  + +  FE + L  +++ ++ +L+ I  E  KI  +   KLK  +  F  +F
Sbjct: 452 NGYLDDLKVSDVARFETDLLKFMRNEKKDVLDWITNEDPKIKGEAADKLKAAIDEFAKDF 511


>gi|383482703|ref|YP_005391617.1| F0F1 ATP synthase subunit alpha [Rickettsia montanensis str. OSU
           85-930]
 gi|378935057|gb|AFC73558.1| F0F1 ATP synthase subunit alpha [Rickettsia montanensis str. OSU
           85-930]
          Length = 510

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + +F+  F 
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLEDFVKEFV 509


>gi|456388842|gb|EMF54282.1| atpA protein [Streptomyces bottropensis ATCC 25435]
          Length = 531

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PM  E+QV  ++ G 
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKSQLERGQRLVELLKQPQYQPMPTEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +  A +  FEKE L ++   E+GL+ SIK+ GK+++DT   +   +  F   F
Sbjct: 454 TGKMDDVPVADVRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDTLTAVADAIAEFKKQF 512


>gi|94502565|ref|YP_588408.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|94502566|ref|YP_588421.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|114151558|ref|YP_740361.1| ATPase subunit 1 [Zea perennis]
 gi|114151591|ref|YP_740440.1| ATPase subunit 1 [Zea luxurians]
 gi|114151624|ref|YP_740394.1| ATPase subunit 1 [Zea mays subsp. parviglumis]
 gi|114405|sp|P05494.1|ATPAM_MAIZE RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13901|emb|CAA77319.1| unnamed protein product [Zea mays]
 gi|897619|gb|AAA70269.1| F1-ATPase alpha subunit [Zea mays]
 gi|40795004|gb|AAR91048.1| ATPase subunit 1 (mitochondrion) [Zea mays]
 gi|40795005|gb|AAR91049.1| ATPase subunit 1 (mitochondrion) [Zea mays]
 gi|93116034|gb|ABE98667.1| ATPase subunit 1 (mitochondrion) [Zea mays subsp. mays]
 gi|93116078|gb|ABE98710.1| ATPase subunit 1 (mitochondrion) [Zea mays subsp. mays]
 gi|93116123|gb|ABE98754.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|102567892|gb|ABF70809.1| ATPase subunit 1 (mitochondrion) [Zea perennis]
 gi|102567957|gb|ABF70841.1| ATPase subunit 1 (mitochondrion) [Zea mays subsp. parviglumis]
 gi|102579627|gb|ABF70907.1| ATPase subunit 1 (mitochondrion) [Zea mays subsp. mays]
 gi|110287587|gb|ABG65633.1| ATPase subunit 1 (mitochondrion) [Zea luxurians]
 gi|224968|prf||1204280A ATPase alpha,F1
          Length = 508

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 7/118 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNF 115
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK    N 
Sbjct: 454 GFCDRMPLDRISQYEKNILSTINPE---LLKSFLEKGGLTNERKMEPDASLKESALNL 508


>gi|383826556|ref|ZP_09981679.1| F0F1 ATP synthase subunit alpha [Mycobacterium xenopi RIVM700367]
 gi|383332362|gb|EID10843.1| F0F1 ATP synthase subunit alpha [Mycobacterium xenopi RIVM700367]
          Length = 549

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLERGERLVELLKQPQYQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD +    +  FE EFL H+++SE  +L+ +++  K+T++   +L  VV  F   F
Sbjct: 453 QGHLDSVPVEDVRRFEAEFLDHVRASEEDILKELRESQKLTDELSDRLTEVVNQFKKGF 511


>gi|89280711|ref|YP_514682.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|289065052|ref|YP_003433863.1| ATP synthase F0 subunit 1 [Oryza rufipogon]
 gi|13959|emb|CAA35787.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|74100078|gb|AAZ99242.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|74100133|gb|AAZ99296.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Japonica
           Group]
 gi|74100187|gb|AAZ99349.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Japonica
           Group]
 gi|285026134|dbj|BAI67967.1| ATP synthase F0 subunit 1 [Oryza rufipogon]
 gi|285026184|dbj|BAI68016.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|285026197|dbj|BAI68029.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|353685220|gb|AER12983.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|353685221|gb|AER12984.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|353685289|gb|AER13051.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|353685290|gb|AER13052.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|374277605|gb|AEZ03711.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
 gi|374277707|gb|AEZ03812.1| ATP synthase F0 subunit 1 (mitochondrion) [Oryza sativa Indica
           Group]
          Length = 509

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 77/112 (68%), Gaps = 7/112 (6%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLK 109
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK
Sbjct: 454 GFCDRMPLDRISQYEKAILSTINPE---LLKSFNEKGGLTNERKIEPDASLK 502


>gi|338812430|ref|ZP_08624606.1| ATP synthase f1, alpha subunit [Acetonema longum DSM 6540]
 gi|337275601|gb|EGO64062.1| ATP synthase f1, alpha subunit [Acetonema longum DSM 6540]
          Length = 515

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 80/120 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT+ LL RG R+TELLKQ QY P  IEEQV  IY GV
Sbjct: 384 LRLDLAQYRELAAFAQFGSDLDKATKALLERGQRMTELLKQPQYAPYPIEEQVLSIYAGV 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I  FE ++L  +++    +++ I+++  +  DT+A LK  +  F   F 
Sbjct: 444 NGYLDDVPVDMINKFEADYLKFLRTQYNEIVKIIREKKAMDADTEAALKKAIQEFKDTFV 503


>gi|189347805|ref|YP_001944334.1| F0F1 ATP synthase subunit alpha [Chlorobium limicola DSM 245]
 gi|226739856|sp|B3EHU6.1|ATPA_CHLL2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189341952|gb|ACD91355.1| ATP synthase F1, alpha subunit [Chlorobium limicola DSM 245]
          Length = 526

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 85/120 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQY+PM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYIPMPVEKQVAIIFLGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD ++   I  FE+EFL+ ++     +L++I ++G +  DT  +LK     F+++F 
Sbjct: 462 QGLLDAVEVPHIRRFEEEFLSMLEHKHPEILKTIAEKGTLEADTAKQLKEAAERFVSSFN 521


>gi|222099820|ref|YP_002534388.1| F0F1 ATP synthase subunit alpha [Thermotoga neapolitana DSM 4359]
 gi|254808120|sp|B9K7T9.1|ATPA_THENN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221572210|gb|ACM23022.1| ATP synthase subunit alpha [Thermotoga neapolitana DSM 4359]
          Length = 503

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +++ELAQYRE+  FAQF ++LD AT+  + RG RL ELLKQ QY PM +EEQV VI+ GV
Sbjct: 383 LRIELAQYRELETFAQFATELDPATRAQIVRGQRLMELLKQEQYSPMPVEEQVVVIFAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD L    +  FEKEFL  +    + +L+ I+++ ++T +T+ KLK  +  F A F
Sbjct: 443 RGYLDDLPVEAVRRFEKEFLRFMHEKHQDILDDIREKKELTPETEEKLKKAIEEFKAVF 501


>gi|373455173|ref|ZP_09547016.1| ATP synthase F1, alpha subunit [Dialister succinatiphilus YIT
           11850]
 gi|371935160|gb|EHO62926.1| ATP synthase F1, alpha subunit [Dialister succinatiphilus YIT
           11850]
          Length = 514

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 81/115 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD AT+  ++RG R TE+LKQ QY P  +E+QV  IY  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDPATKAQIDRGQRTTEILKQPQYSPYPVEDQVLAIYIAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G LD ++ +++  FE +F+  + SS   + E IKK  K+T++ +A+LK  +  F
Sbjct: 442 KGALDDIEVSQVVDFEHKFIDFMHSSHPEVGEDIKKAKKLTDENEARLKDAIAEF 496


>gi|341614327|ref|ZP_08701196.1| F0F1 ATP synthase subunit alpha [Citromicrobium sp. JLT1363]
          Length = 509

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ+LLNRG RLTELLKQ Q+ PM  EEQ   I+ G 
Sbjct: 390 IKLELAQYREMAAFAQFGSDLDASTQKLLNRGARLTELLKQPQFSPMPFEEQTVSIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++T +E + L+ ++     +L+ I++  K  +D   +    +  F   F
Sbjct: 450 NGYLDDVATDRVTEYETQMLSFMRHEHADVLKDIRESKKFEDDVKDRTVKALDAFAKQF 508


>gi|339504241|ref|YP_004691661.1| ATP synthase subunit alpha [Roseobacter litoralis Och 149]
 gi|338758234|gb|AEI94698.1| ATP synthase subunit alpha [Roseobacter litoralis Och 149]
          Length = 512

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 79/120 (65%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQQLL RG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQQLLARGARLTELMKQSQYSPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G LDK+D   +  FE   L  +++ +  +L+ I   + KI  D   KLK  ++ F ++F
Sbjct: 452 NGFLDKVDVKDVGRFETGLLNFMRAKKSDVLDWITNDDPKIKGDAADKLKAAISEFASDF 511


>gi|374320814|ref|YP_005073943.1| ATP synthase subunit alpha [Paenibacillus terrae HPL-003]
 gi|357199823|gb|AET57720.1| ATP synthase subunit alpha [Paenibacillus terrae HPL-003]
          Length = 504

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AF+QFGSDLD +T+  L+RG R+ E+LKQG   P+A+E+QV  +Y  V
Sbjct: 382 LRLDLAQYRELQAFSQFGSDLDKSTKARLDRGARMMEILKQGVNQPLAVEQQVVSLYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +  A +  FEK+FL++++S  + +L+SI+    +  D DA LK  +  F  +F
Sbjct: 442 KGFLDDIPVADVKRFEKDFLSYMESDHQDILQSIRDTKDLVPDNDAALKAAIEKFKKSF 500


>gi|157826259|ref|YP_001493979.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
 gi|166201673|sp|A8GPZ6.1|ATPA_RICAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157800217|gb|ABV75471.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
          Length = 512

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 84/119 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P+ +EEQ+  +Y G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYRPLPVEEQIISLYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  +
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKAY 508


>gi|24298788|dbj|BAC22103.1| F-ATPase alpha-subunit [Thermotoga neapolitana]
          Length = 503

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +++ELAQYRE+  FAQF ++LD AT+  + RG RL ELLKQ QY PM +EEQV VI+ GV
Sbjct: 383 LRIELAQYRELETFAQFATELDPATRAQIVRGQRLMELLKQEQYSPMPVEEQVVVIFAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD L    +  FEKEFL  +    + +L+ I+++ ++T +T+ KLK  +  F A F
Sbjct: 443 RGYLDDLPVEAVRRFEKEFLRFMHEKHQDILDDIREKKELTPETEEKLKKAIEEFKAVF 501


>gi|110597217|ref|ZP_01385505.1| ATP synthase F1, alpha subunit [Chlorobium ferrooxidans DSM 13031]
 gi|110341053|gb|EAT59521.1| ATP synthase F1, alpha subunit [Chlorobium ferrooxidans DSM 13031]
          Length = 526

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQY+PM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYIPMPVEKQVAIIFLGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +D   I  FE+EFL+ ++  +  +L +I   G +  DT  KLK     F+  F
Sbjct: 462 QGLLDTVDLRFIRKFEEEFLSALEIKQSDILSAIATSGALESDTANKLKEFALKFVETF 520


>gi|399054332|ref|ZP_10742863.1| proton translocating ATP synthase, F1 alpha subunit [Brevibacillus
           sp. CF112]
 gi|433544783|ref|ZP_20501157.1| ATP synthase subunit alpha [Brevibacillus agri BAB-2500]
 gi|398047835|gb|EJL40337.1| proton translocating ATP synthase, F1 alpha subunit [Brevibacillus
           sp. CF112]
 gi|432183891|gb|ELK41418.1| ATP synthase subunit alpha [Brevibacillus agri BAB-2500]
          Length = 503

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 2/120 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLD ATQ  L RG RL E++KQGQ+ PM +E+QVA IY   
Sbjct: 383 LKLELAQYRELAAFAQFGSDLDKATQARLTRGERLMEIMKQGQFDPMPVEKQVASIYSAT 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +  A +  FEKE L+ + S++  LLE I+    + ++ +  L   +  F   F+
Sbjct: 443 RGYLDDIPVADVRRFEKELLSFLDSNKPHLLEHIRTTKDLPDEKE--LNAAIEEFKKGFS 500


>gi|392427800|ref|YP_006468794.1| ATP synthase F1 subcomplex alpha subunit [Desulfosporosinus
           acidiphilus SJ4]
 gi|391357763|gb|AFM43462.1| ATP synthase F1 subcomplex alpha subunit [Desulfosporosinus
           acidiphilus SJ4]
          Length = 500

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 78/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LA YRE+AAFAQFGSDLD  TQ  LNRG R  E+LKQ QY PM +EE+V VIY  V
Sbjct: 380 LRLDLASYRELAAFAQFGSDLDKVTQMRLNRGKRTMEILKQTQYAPMPVEEEVVVIYAAV 439

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G  D +D  KI  FE+E+L  ++S +  LL  I+ E  ++ +  A+L+  +  F   F 
Sbjct: 440 KGFTDDIDVEKIGKFEQEYLRFMRSVKADLLTKIRTEKALSNEMIAELEKAINEFKQGFV 499


>gi|238018580|ref|ZP_04599006.1| hypothetical protein VEIDISOL_00407 [Veillonella dispar ATCC 17748]
 gi|237865051|gb|EEP66341.1| hypothetical protein VEIDISOL_00407 [Veillonella dispar ATCC 17748]
          Length = 512

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  L+RG RLTE+LKQGQY PM++ E V  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATKAQLDRGERLTEMLKQGQYEPMSVAEMVINLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+L  +  A + +FE E L  +K++   ++ +I+   KI EDT+  LK  +   +  F
Sbjct: 442 KGYLANIQVADVLSFESELLRFVKANYPEIITNIETSKKIDEDTENLLKQAIPECVEAF 500


>gi|408529245|emb|CCK27419.1| ATP synthase subunit alpha [Streptomyces davawensis JCM 4913]
          Length = 535

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PM+ E+QV  ++ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKSQLERGQRMVELLKQAQYQPMSTEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++  A I  FEKE L ++   E+GL+ SIK+ GK+++DT   +   + +F   F
Sbjct: 454 TGKMDEVPVADIRRFEKELLEYLHRKEQGLMTSIKEGGKLSDDTLTAVADAIADFKKQF 512


>gi|206889640|ref|YP_002248088.1| ATP synthase F1, alpha subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|226739953|sp|B5YI22.1|ATPA_THEYD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206741578|gb|ACI20635.1| ATP synthase F1, alpha subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 502

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 83/119 (69%), Gaps = 4/119 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQF +DLD AT+ LL RG R+ ELLKQ QYVPM +E+Q+ +I+ G 
Sbjct: 382 LRLDLAQYRELAAFAQFAADLDKATRALLERGQRMVELLKQDQYVPMPVEDQIMLIFAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +GHLD L  + I  FE+ FL+ I+S +    E I+KE +  ++ D  LK  +T+ +  F
Sbjct: 442 QGHLDDLPVSAIKAFEQGFLSFIRSQK----EDIRKEIREKKELDDTLKQKITDAILEF 496


>gi|222146344|gb|ACM46758.1| atpA [Abies sachalinensis]
          Length = 222

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/105 (54%), Positives = 79/105 (75%), Gaps = 3/105 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE++KQ QY P+  E+Q+ VI+  V
Sbjct: 108 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVMKQPQYSPLPTEKQIIVIHAAV 167

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTD 105
           +G  D++   +I+ +E+  L+ I  S   LL+SI ++G++T + +
Sbjct: 168 KGFGDRMPLDRISRYERAILSSIDPS---LLQSILEKGELTHEIE 209


>gi|99081928|ref|YP_614082.1| ATP synthase F0F1 subunit alpha [Ruegeria sp. TM1040]
 gi|118573491|sp|Q1GEU6.1|ATPA_SILST RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|99038208|gb|ABF64820.1| ATP synthase F1 alpha subunit [Ruegeria sp. TM1040]
          Length = 513

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 82/125 (65%), Gaps = 10/125 (8%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQQLL RG RLTEL+KQ QY P+   E V +I+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQQLLARGARLTELMKQPQYSPLTNSEIVCIIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK------KEGKITEDTDAKLKTVVTN 114
            G+LDK+D  ++  +E E L  ++S +   L+ I       K+G+  E    K+K V+  
Sbjct: 452 NGYLDKVDVKEVGRYEAELLTFLRSKKADFLQWITDEDPKFKKGEPVE----KMKAVLDE 507

Query: 115 FLANF 119
           F A+F
Sbjct: 508 FAADF 512


>gi|345852709|ref|ZP_08805639.1| F0F1 ATP synthase subunit alpha [Streptomyces zinciresistens K42]
 gi|345635824|gb|EGX57401.1| F0F1 ATP synthase subunit alpha [Streptomyces zinciresistens K42]
          Length = 529

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 4/119 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PMA E+QV  ++   
Sbjct: 394 LRLDLAQYRELEAFAAFGSDLDAASKAQLERGSRLVELLKQAQYQPMATEDQVVSVWGAT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +  A I  FEKE L ++   E+GL+ SIK+ GK+++DT     T V +  A+F
Sbjct: 454 TGKMDDVPVADIRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDT----LTAVADAFADF 508


>gi|297493564|gb|ADI40504.1| mitochondrial H+-transporting ATP synthase F1 complex alpha subunit
           1 [Scotophilus kuhlii]
          Length = 290

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/59 (94%), Positives = 57/59 (96%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCG 59
           MKLELAQYREVAAFAQFGSDLDAATQQLL+RGVRLTELLKQGQY PMAIEEQVAVIY G
Sbjct: 232 MKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAG 290


>gi|379712952|ref|YP_005301291.1| F0F1 ATP synthase subunit alpha [Rickettsia philipii str. 364D]
 gi|376329597|gb|AFB26834.1| F0F1 ATP synthase subunit alpha [Rickettsia philipii str. 364D]
          Length = 510

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 81/120 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L  +   K+  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLSDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 509


>gi|302554175|ref|ZP_07306517.1| ATP synthase F1, alpha subunit [Streptomyces viridochromogenes DSM
           40736]
 gi|302471793|gb|EFL34886.1| ATP synthase F1, alpha subunit [Streptomyces viridochromogenes DSM
           40736]
          Length = 529

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PMA E+QV  I+ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQPQYQPMATEDQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++  A I  FEKE L ++   E+GLL SI++ GK+++DT   +   +  F   F
Sbjct: 454 TGKMDEVPVADIRRFEKELLEYLHRKEQGLLTSIREGGKMSDDTLQAMADAIAEFKKQF 512


>gi|329121455|ref|ZP_08250079.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
 gi|327469370|gb|EGF14840.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
          Length = 514

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 82/115 (71%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+AAFAQFGSDLDAAT+  ++RG R TE+LKQ QY P  +E+QV  IY GV
Sbjct: 382 LRLDLAQFRELAAFAQFGSDLDAATKAQIDRGQRTTEILKQPQYNPYPVEDQVMAIYVGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G+LD ++  ++  FEK+ L  + ++   + ESI+ E K+ E+T+  L+  +  F
Sbjct: 442 KGYLDDIEVDEVVNFEKQLLDFMHTNHPEVGESIRTEKKLIEETEENLRKAIAEF 496


>gi|354581600|ref|ZP_09000503.1| ATP synthase F1, alpha subunit [Paenibacillus lactis 154]
 gi|353200217|gb|EHB65677.1| ATP synthase F1, alpha subunit [Paenibacillus lactis 154]
          Length = 504

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+ AF+QFGSDLD +T   LNRG +L E+LKQG   P+++E+QV  +Y  V
Sbjct: 382 MKLDLAQYRELQAFSQFGSDLDKSTLARLNRGSKLMEILKQGVNQPLSVEQQVVSLYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD ++ A +  FEKEFLA I+S++  +L+SI     +T D +  LK  +  F   F
Sbjct: 442 KGYLDDIEVADVRRFEKEFLAFIESNKPEILKSITDTKDLTADNENALKAAIDQFKKGF 500


>gi|261409679|ref|YP_003245920.1| ATP synthase F1 subunit alpha [Paenibacillus sp. Y412MC10]
 gi|261286142|gb|ACX68113.1| ATP synthase F1, alpha subunit [Paenibacillus sp. Y412MC10]
          Length = 504

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+ AF+QFGSDLD +T   LNRG RL E+LKQG   P+++E+QV  +Y  V
Sbjct: 382 MKLDLAQYRELQAFSQFGSDLDKSTLARLNRGARLMEILKQGVNQPLSVEQQVVSLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G++D ++ A +  FE EFLA I S++  +L+SI     +T D +  LK  +  F   F
Sbjct: 442 KGYIDDIEVADVRRFESEFLAFIGSNKPEILQSITDTKDLTSDNENALKAAIDQFKKGF 500


>gi|317154801|ref|YP_004122849.1| ATP synthase F1 subunit alpha [Desulfovibrio aespoeensis Aspo-2]
 gi|316945052|gb|ADU64103.1| ATP synthase F1, alpha subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 502

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLD ATQQ LNRG R+ E+LKQ QY P  +++QV++++   
Sbjct: 382 LRLDLAQYRELAAFASFGSDLDKATQQKLNRGARMVEVLKQPQYKPQTVQQQVSILFAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD +  A +  FE EF   + +++  +L+SI ++ +I  D +A L+  +  F   F+
Sbjct: 442 RGYLDDVPVASVQKFEAEFHEFMANAKSAVLDSIVEKQQIDADVEAGLRAAIDEFKKGFS 501


>gi|329923654|ref|ZP_08279079.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
 gi|328941131|gb|EGG37431.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
          Length = 507

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+ AF+QFGSDLD +T   LNRG RL E+LKQG   P+++E+QV  +Y  V
Sbjct: 385 MKLDLAQYRELQAFSQFGSDLDKSTLARLNRGARLMEILKQGVNQPLSVEQQVVSLYAAV 444

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G++D ++ A +  FE EFLA I S++  +L+SI     +T D +  LK  +  F   F
Sbjct: 445 KGYIDDIEVADVRRFESEFLAFIGSNKPEILQSITDTKDLTSDNENALKAAIDQFKKGF 503


>gi|315649872|ref|ZP_07902954.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
 gi|315274671|gb|EFU38053.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
          Length = 504

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           MKL+LAQYRE+ AF+QFGSDLD +T   LNRG RL E+LKQG   P+++E+QV  +Y  V
Sbjct: 382 MKLDLAQYRELQAFSQFGSDLDKSTLARLNRGARLMEILKQGVNQPLSVEQQVVSLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G++D ++ A +  FE EFLA I S++  +L+SI     +T D +  LK  +  F   F
Sbjct: 442 KGYIDDIEVADVRRFESEFLAFIGSNKPEILQSITDTKDLTSDNENALKAAIDQFKKGF 500


>gi|115278596|ref|YP_762500.1| ATPase subunit 1 [Tripsacum dactyloides]
 gi|114432087|gb|ABI74636.1| ATPase subunit 1 (mitochondrion) [Tripsacum dactyloides]
          Length = 816

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 7/116 (6%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVT 113
           G  D++   +I+ +EK  L+ I      LL+S  ++G +T     + DA LK  + 
Sbjct: 454 GFCDRMPLDRISQYEKNILSTINPE---LLKSFLEKGGLTNERKMEPDASLKAQIP 506


>gi|383644077|ref|ZP_09956483.1| F0F1 ATP synthase subunit alpha [Streptomyces chartreusis NRRL
           12338]
          Length = 529

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PMA E+QV  I+ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQPQYQPMATEDQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++  A I  FEKE L ++   E+GLL SI++ GK+++DT   +   +  F   F
Sbjct: 454 TGKMDEVPVADIRRFEKELLEYLHRKEQGLLTSIREGGKMSDDTLQAMADAIAEFKKQF 512


>gi|443898003|dbj|GAC75341.1| RNA polymerase II transcription elongation factor Elongin/SIII,
           subunit elongin C [Pseudozyma antarctica T-34]
          Length = 652

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/119 (52%), Positives = 81/119 (68%), Gaps = 2/119 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAAT+  LNRGVRL ELLKQ Q+VPMA E Q+ +IY GV
Sbjct: 534 LKLSLAQYRELAAFAQFGSDLDAATRATLNRGVRLVELLKQPQFVPMATEVQIPIIYAGV 593

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +   +I  +E  F   ++ +E  LL  I   GK +++   K+KT+VT  +  F
Sbjct: 594 NGLIDSIPADRIVEWENSFREKLQ-TEDALLAEIAA-GKPSDELFNKMKTLVTEHVKGF 650


>gi|255326274|ref|ZP_05367360.1| ATP synthase F1, alpha subunit [Rothia mucilaginosa ATCC 25296]
 gi|255296728|gb|EET76059.1| ATP synthase F1, alpha subunit [Rothia mucilaginosa ATCC 25296]
          Length = 541

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR + AFA F SDLD AT+  L RG RLTELL+Q QY P A+EEQV  I+ G 
Sbjct: 394 LKLELAQYRSMEAFAMFASDLDDATKAQLTRGSRLTELLRQPQYTPYAVEEQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ + +  FE  F+ +++  +  +L  I   GK+ +DT A LK+ VT+F   F
Sbjct: 454 SGHLDDIEISDVLRFEAGFIEYLR-HKTSVLTDIASSGKLEDDTVAALKSAVTDFKQGF 511


>gi|290957354|ref|YP_003488536.1| ATP synthase subunit alpha [Streptomyces scabiei 87.22]
 gi|260646880|emb|CBG69977.1| ATP synthase alpha chain [Streptomyces scabiei 87.22]
          Length = 544

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA FGSDLDAA++  L RG RL ELLKQ QY PM  E+QV  ++ G 
Sbjct: 407 LRLDLAQYRELEAFAAFGSDLDAASKSQLERGQRLVELLKQPQYQPMPTEDQVVSVWAGT 466

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +  + +  FEKE L ++   E+GL+ SIK+ GK+++DT   +   +  F   F
Sbjct: 467 TGKMDDVPVSDVRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDTLTAVADAIVEFKKQF 525


>gi|89897660|ref|YP_521147.1| F0F1 ATP synthase subunit alpha [Desulfitobacterium hafniense Y51]
 gi|119367952|sp|Q24MN9.1|ATPA_DESHY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|89337108|dbj|BAE86703.1| ATP synthase F1 alpha subunit [Desulfitobacterium hafniense Y51]
          Length = 502

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 83/121 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD  TQ  L RG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKITQMRLTRGERMMEILKQKQYEPMVVEEQVVVLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +   KI +FE+++L  +++++  LL  I+ E  + ++ +A+++  +T     F 
Sbjct: 442 KGFLDDIPVDKIKSFEEDYLRTMRTTKADLLAKIRTEKALNDELNAEIEKAITEVKEGFL 501

Query: 121 G 121
           G
Sbjct: 502 G 502


>gi|194033257|ref|YP_002000594.1| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
 gi|148886790|sp|P0C520.1|ATPAM_ORYSA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|148886791|sp|P0C521.1|ATPAM_ORYSI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|148886792|sp|P0C522.1|ATPAM_ORYSJ RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|60498752|dbj|BAC19899.2| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
          Length = 509

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 3/108 (2%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVSKQPQYEPLPIEKQIVVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKL 108
            G  D++   +I+ +EK  L+ I      LL+S  ++G +T +   +L
Sbjct: 453 NGFCDRMPLDRISQYEKAILSTINPE---LLKSFNEKGGLTNERKIEL 497


>gi|239946821|ref|ZP_04698574.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068659|ref|XP_002408500.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|215492488|gb|EEC02129.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|239921097|gb|EER21121.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 512

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFLQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           + +L+ +   K+  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  +
Sbjct: 450 KKYLNDVPLQKVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKAY 508


>gi|406029693|ref|YP_006728584.1| ATP synthase subunit alpha [Mycobacterium indicus pranii MTCC 9506]
 gi|405128240|gb|AFS13495.1| ATP synthase subunit alpha [Mycobacterium indicus pranii MTCC 9506]
          Length = 551

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+Q+RE+ +FA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQFRELESFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL  I+   K++++   +LK V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEEKLLSGIRDTQKLSDEAAEELKKVINNFKKGF 511


>gi|112253900|ref|YP_717155.1| ATPase subunit 1 [Brassica napus]
 gi|37591102|dbj|BAC98904.1| ATPase subunit 1 [Brassica napus]
          Length = 507

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/108 (55%), Positives = 77/108 (71%), Gaps = 5/108 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKL 108
            G  D++   +I+ +EK  L  +K     LL+++K  G +T +   +L
Sbjct: 453 NGFCDRMPLDRISQYEKAILNSVKPE---LLQALK--GGLTNERKMEL 495


>gi|400536238|ref|ZP_10799773.1| F0F1 ATP synthase subunit alpha [Mycobacterium colombiense CECT
           3035]
 gi|400330320|gb|EJO87818.1| F0F1 ATP synthase subunit alpha [Mycobacterium colombiense CECT
           3035]
          Length = 559

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ +FA F SDLDA ++  L RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELESFAAFASDLDATSKAQLERGERLVELLKQPQYQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE   L  ++  GK++E+ + +L  ++ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEKFLAGVRDSGKLSEEGENQLTEIINNFKKGF 511


>gi|14916970|sp|P92549.2|ATPAM_ARATH RecName: Full=ATP synthase subunit alpha, mitochondrial
          Length = 507

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/108 (55%), Positives = 77/108 (71%), Gaps = 5/108 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKL 108
            G  D++   +I+ +EK  L  +K     LL+++K  G +T +   +L
Sbjct: 453 NGFCDRMPLDRISQYEKAILNSVKPE---LLQALK--GGLTNERKMEL 495


>gi|58039761|ref|YP_191725.1| ATP synthase F0F1 subunit alpha [Gluconobacter oxydans 621H]
 gi|81557054|sp|Q5FRC7.1|ATPA1_GLUOX RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|58002175|gb|AAW61069.1| ATP synthase alpha chain [Gluconobacter oxydans 621H]
          Length = 511

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAF+QF SDLDAAT++ L+RG RL ELLKQ +  P+ +EEQV V+Y G 
Sbjct: 391 IKLELAQYREMAAFSQFASDLDAATRKQLDRGARLVELLKQPETSPLPVEEQVVVLYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG++D +   K+  +E   L+ ++ +   +L +I+ + +I  +T+ KLK ++  F   F+
Sbjct: 451 RGYVDPIAVDKVVAYEAALLSELRGAGSDILTAIRNDRQIKPETEGKLKELLEAFGKRFS 510


>gi|46579190|ref|YP_009998.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603236|ref|YP_967636.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris DP4]
 gi|387152584|ref|YP_005701520.1| ATP synthase F1 subunit alpha [Desulfovibrio vulgaris RCH1]
 gi|81567070|sp|Q72E02.1|ATPA_DESVH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513917|sp|A1VFJ3.1|ATPA_DESVV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46448603|gb|AAS95257.1| ATP synthase, F1 alpha subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563465|gb|ABM29209.1| ATP synthase F1 subcomplex alpha subunit [Desulfovibrio vulgaris
           DP4]
 gi|311233028|gb|ADP85882.1| ATP synthase F1, alpha subunit [Desulfovibrio vulgaris RCH1]
          Length = 502

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 76/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD AT+  L+RG RL ELLKQ QY PM  EEQVA +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATKAKLDRGARLVELLKQPQYEPMPTEEQVASMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           RG +D +  A I  FE   L +++S +  +L  IK +  + +D + +LK  +  F
Sbjct: 442 RGLMDDVAVADIRKFETAMLDYLRSGKADILNDIKTKKALDQDIENRLKAAIAEF 496


>gi|282849841|ref|ZP_06259225.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
 gi|282580778|gb|EFB86177.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
          Length = 512

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  L+RG RLTE+LKQGQY PM++ E V  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATRAQLDRGERLTEMLKQGQYEPMSVAEMVINLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+L  +  A + +FE E L ++K++   ++ +I+   KI E+T+  LK  +   +  F
Sbjct: 442 KGYLADIQVADVLSFESELLRYVKANYPEIITNIETSKKIDEETENLLKQAIPECVEAF 500


>gi|431795317|ref|YP_007222222.1| ATP synthase F1 subcomplex subunit alpha [Desulfitobacterium
           dichloroeliminans LMG P-21439]
 gi|430785543|gb|AGA70826.1| ATP synthase F1 subcomplex alpha subunit [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 502

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD  TQ  LNRG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKITQMRLNRGERMMEILKQKQYEPMLVEEQVVVLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G +D++   KI  FE+ +L ++++S+  LL  I+ E  + ++ +A+++  +     +F
Sbjct: 442 KGFIDEIPVDKIKEFEEAYLRYLRTSQADLLTRIRTEKALNDELNAEIEKAINEVKQDF 500


>gi|357020345|ref|ZP_09082580.1| F0F1 ATP synthase subunit alpha [Mycobacterium thermoresistibile
           ATCC 19527]
 gi|356480381|gb|EHI13514.1| F0F1 ATP synthase subunit alpha [Mycobacterium thermoresistibile
           ATCC 19527]
          Length = 549

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 79/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDA ++  L+RG RL E+LKQ Q  PM +E+QV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDATSKAQLDRGARLVEVLKQPQNSPMPVEDQVVAIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GHLD +    +  FE EFL H+K+S + +L  I+   K++++T  KL  VV  F   F+
Sbjct: 453 KGHLDSVPIEDVQRFEAEFLEHVKASHQEILTDIRDSKKLSDETAEKLVNVVNEFKKGFS 512


>gi|398816972|ref|ZP_10575607.1| proton translocating ATP synthase, F1 alpha subunit [Brevibacillus
           sp. BC25]
 gi|398031484|gb|EJL24870.1| proton translocating ATP synthase, F1 alpha subunit [Brevibacillus
           sp. BC25]
          Length = 503

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/95 (58%), Positives = 72/95 (75%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLD ATQ  L RG RL E++KQGQ+ PM++E+QVA IY   
Sbjct: 383 LKLELAQYRELAAFAQFGSDLDKATQARLTRGERLMEIMKQGQFDPMSVEKQVASIYSAT 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK 95
           RG LD +  A++  FEKE L+ + S++  LLE I+
Sbjct: 443 RGFLDDIPVAEVRRFEKEMLSFLDSNKPQLLEHIR 477


>gi|312142785|ref|YP_003994231.1| ATP synthase F1 subunit alpha [Halanaerobium hydrogeniformans]
 gi|311903436|gb|ADQ13877.1| ATP synthase F1, alpha subunit [Halanaerobium hydrogeniformans]
          Length = 528

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AF+QFGSDLD ATQQ L RG R+ E+LKQ QY PM +E+QV +IY  V
Sbjct: 383 LRLDLSQYRELEAFSQFGSDLDKATQQKLARGERIVEILKQDQYSPMDVEDQVIIIYTVV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LD L    +  FE EFL ++ S+   L + IK+EGK+T++    +K  +  F   F
Sbjct: 443 NGFLDDLPVDNLQRFEAEFLDYLDSTHPELGQEIKEEGKLTDELKENIKKAINEFKDMF 501


>gi|302035753|ref|YP_003796075.1| ATP synthase F1 subunit alpha [Candidatus Nitrospira defluvii]
 gi|300603817|emb|CBK40149.1| ATP synthase F1, alpha subunit [Candidatus Nitrospira defluvii]
          Length = 505

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 76/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAF+QFGS+LD ATQ  L RGVR+ ELLKQGQY PM + +QV  IY GV
Sbjct: 382 LRLDLAQYREMAAFSQFGSELDKATQMQLARGVRMVELLKQGQYKPMPVADQVLSIYAGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
            G LD +   K+  FE + L ++  + + + + I   GKI +    KLK ++  F
Sbjct: 442 NGFLDDVPVDKVLQFEADLLHYVAQNHQDMRKDIATVGKIDDKVGGKLKEIIATF 496


>gi|433456705|ref|ZP_20414739.1| F0F1 ATP synthase subunit alpha [Arthrobacter crystallopoietes
           BAB-32]
 gi|432195920|gb|ELK52417.1| F0F1 ATP synthase subunit alpha [Arthrobacter crystallopoietes
           BAB-32]
          Length = 545

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR++ AFA F SDLDAA++Q L RG RLTELLKQGQY P  +E+QV  I+ G 
Sbjct: 394 LKLELAQYRDMQAFAMFASDLDAASKQQLERGARLTELLKQGQYSPYPVEDQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I  FE+EFL H++   + +L +I +   + + T  +LK+ +T F   F 
Sbjct: 454 NGYLDDVPVEDINRFEREFLEHLRHRSQ-VLTTIAQTNVLEDSTLDELKSQITEFKQGFF 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|345887245|ref|ZP_08838439.1| ATP synthase subunit alpha [Bilophila sp. 4_1_30]
 gi|345042019|gb|EGW46133.1| ATP synthase subunit alpha [Bilophila sp. 4_1_30]
          Length = 502

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 76/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD +T+Q L RG RL ELLKQ QY PM  +EQV  +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKSTKQKLERGARLVELLKQPQYQPMPTQEQVVSMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           RG +D +  A +  FE++FL  I+ ++  +L+ I     +  D +A+LK  +  F
Sbjct: 442 RGFMDDVPVASVQAFERDFLDFIRGAKSDILDDIVARKVLDADLEARLKDAILEF 496


>gi|319997186|gb|ADV91187.1| mitochondrial ATP synthase F1 alpha subunit-like protein 2, partial
           [Karlodinium micrum]
          Length = 365

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 78/116 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDA+TQQ L RG  LTELLKQ Q+VPM   E +A ++ G 
Sbjct: 240 LKLELAQYREVAAFAQFGSDLDASTQQQLLRGGILTELLKQKQFVPMKTSEIIASLWAGT 299

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G LDK+   +I  FE  +L H+KS+    LE I  + ++T++     KT +  F+
Sbjct: 300 NGFLDKIAAKEILRFEALWLDHLKSTRAATLEEIMVKKQMTDEITTGFKTAMDEFI 355


>gi|294792755|ref|ZP_06757902.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
 gi|294456654|gb|EFG25017.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
          Length = 512

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  L+RG RLTE+LKQGQY PM++ E V  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATRAQLDRGERLTEMLKQGQYEPMSVAEMVINLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+L  +  A + +FE E L ++K++   ++ +I+   KI E+T+  LK  +   +  F
Sbjct: 442 KGYLADIQVADVLSFEAELLRYVKTNYPEIITNIETSKKIDEETENLLKQAIPECVEAF 500


>gi|388856550|emb|CCF49856.1| probable H+-transporting ATP synthase alpha chain, mitochondrial
           [Ustilago hordei]
          Length = 543

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 2/119 (1%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAAT+  LNRGVRL ELLKQ Q+VPMA E Q+ +IY GV
Sbjct: 425 LKLSLAQYRELAAFAQFGSDLDAATRATLNRGVRLVELLKQPQFVPMATEVQIPIIYAGV 484

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +   +I  +E  F   + S+E  LL  I K G  +E+   K+KT++T  +  F
Sbjct: 485 NGLVDSIPADRIVEWENSFREKL-STEDALLSEIGK-GVPSEELFNKMKTLITEHVKGF 541


>gi|357967254|ref|YP_004935282.1| ATPase subunit 1 (mitochondrion) [Silene conica]
 gi|346228139|gb|AEO21068.1| ATPase subunit 1 (mitochondrion) [Silene conica]
          Length = 513

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 80/124 (64%), Gaps = 13/124 (10%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQQQYAPLPIEKQILVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEK--------EFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVV 112
            G  D++   KI+ +EK        +FL  +K S +G L S     +I  + D+ LK   
Sbjct: 453 NGFCDRMPLDKISEYEKTIPSSVNHQFLQSLKQSLKGGLTS-----QIKLELDSFLKECA 507

Query: 113 TNFL 116
            N L
Sbjct: 508 LNLL 511


>gi|294794507|ref|ZP_06759643.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
 gi|416999384|ref|ZP_11939975.1| ATP synthase F1, alpha subunit [Veillonella parvula
           ACS-068-V-Sch12]
 gi|294454837|gb|EFG23210.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
 gi|333976824|gb|EGL77686.1| ATP synthase F1, alpha subunit [Veillonella parvula
           ACS-068-V-Sch12]
          Length = 512

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  L+RG RLTE+LKQGQY PM++ E V  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATRAQLDRGERLTEMLKQGQYEPMSVAEMVINLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+L  +  A + +FE E L ++K++   ++ +I+   KI E+T+  LK  +   +  F
Sbjct: 442 KGYLADIQVADVLSFEAELLRYVKANYPEIITNIETSKKIDEETENLLKQAIPECVEAF 500


>gi|444304704|ref|ZP_21140494.1| F0F1 ATP synthase subunit alpha [Arthrobacter sp. SJCon]
 gi|443482897|gb|ELT45802.1| F0F1 ATP synthase subunit alpha [Arthrobacter sp. SJCon]
          Length = 545

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 81/123 (65%), Gaps = 5/123 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E QV  I+ G 
Sbjct: 394 LKLDLAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVENQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHI--KSSERGLLESIKKEGKITEDTDAKLKTVVTNFLAN 118
            G+LD +    I+ FE+EFL H+  KSS   +L ++ +   + +DT A LK+ + +F   
Sbjct: 454 NGYLDDVPVEDISRFEREFLDHLGRKSS---ILTTLAQTNVLDDDTVAALKSAIVDFKKG 510

Query: 119 FTG 121
           F G
Sbjct: 511 FFG 513


>gi|269798590|ref|YP_003312490.1| ATP synthase F1 subunit alpha [Veillonella parvula DSM 2008]
 gi|269095219|gb|ACZ25210.1| ATP synthase F1, alpha subunit [Veillonella parvula DSM 2008]
          Length = 512

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 83/119 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLDAAT+  L+RG RLTE+LKQGQY PM++ E V  +Y G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDAATRAQLDRGERLTEMLKQGQYEPMSVAEMVINLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+L  +  A + +FE E L ++K++   ++ +I+   KI E+T+  LK  +   +  F
Sbjct: 442 KGYLADIQVADVLSFEAELLRYVKANYPEIITNIETSKKIDEETENLLKQAIPECVEAF 500


>gi|317486589|ref|ZP_07945410.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
 gi|316922189|gb|EFV43454.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
          Length = 502

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 76/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD +T+Q L RG RL ELLKQ QY PM  +EQV  +Y   
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKSTKQKLERGARLVELLKQPQYQPMPTQEQVVSMYAAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           RG +D +  A +  FE++FL  I+ ++  +L+ I     +  D +A+LK  +  F
Sbjct: 442 RGFMDDVPVASVQAFERDFLDFIRGAKSDILDDIVARKVLDADLEARLKDAILEF 496


>gi|289753385|ref|ZP_06512763.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289693972|gb|EFD61401.1| predicted protein [Mycobacterium tuberculosis EAS054]
          Length = 354

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 198 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 257

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 258 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 316


>gi|227497329|ref|ZP_03927561.1| F0F1 ATP synthase subunit alpha [Actinomyces urogenitalis DSM
           15434]
 gi|226833200|gb|EEH65583.1| F0F1 ATP synthase subunit alpha [Actinomyces urogenitalis DSM
           15434]
          Length = 543

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 82/119 (68%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYR + AFA F SDLDAAT+Q L RG RL ELLKQ Q+ P  +EEQV  ++ G 
Sbjct: 394 LKLTLAQYRSMQAFAMFASDLDAATRQQLTRGERLMELLKQPQFTPYPVEEQVVSVWTGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L+ +++  FE   L +++ S   +LE+I+  G++TE+T+A+LK  V  F +++
Sbjct: 454 NGYLDDLEVSEVLPFEAALLGYLRRSSS-VLETIRSTGQLTEETEAQLKADVEAFRSSY 511


>gi|325963828|ref|YP_004241734.1| ATP synthase F1 subcomplex subunit alpha [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469915|gb|ADX73600.1| ATP synthase F1 subcomplex alpha subunit [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 559

 Score =  114 bits (285), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E QV  I+ G 
Sbjct: 408 LKLDLAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVENQVVSIWAGT 467

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I+ FE EFL H+ + +  +L ++ +   + +DT A LK+ + +F   F 
Sbjct: 468 NGYLDDVPVEDISRFESEFLEHL-THKSSILTTLAQTNVLDDDTAAALKSAIVDFKKGFF 526

Query: 121 G 121
           G
Sbjct: 527 G 527


>gi|256390418|ref|YP_003111982.1| F0F1 ATP synthase subunit alpha [Catenulispora acidiphila DSM
           44928]
 gi|256356644|gb|ACU70141.1| ATP synthase F1, alpha subunit [Catenulispora acidiphila DSM 44928]
          Length = 544

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+R++ AFA F SDLD A++  L RG R+ E+LKQGQY P  +EEQVA I+ G 
Sbjct: 394 LRVDLAQFRDLEAFAAFASDLDDASKAQLARGQRMVEILKQGQYEPYPVEEQVASIWIGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +  A +  FEKEF++++K+   G+L SI++ G++++DT +  K  V  F   F
Sbjct: 454 SGSIDDVPVADVRRFEKEFVSYLKTDHSGVLNSIRETGQLSDDTVSAFKDAVAQFKRGF 512


>gi|157165899|gb|ABV25025.1| ATP synthase alpha subunit [Boehmeria nivea]
 gi|157165903|gb|ABV25027.1| ATP synthase alpha subunit [Boehmeria nivea]
          Length = 457

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 66/85 (77%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 340 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAV 399

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKS 85
            G  D++   +I+ +E+  L  IK+
Sbjct: 400 NGFCDRMPLDRISQYERAILNSIKA 424


>gi|338730086|ref|YP_004659478.1| ATP synthase F1 subcomplex subunit alpha [Thermotoga thermarum DSM
           5069]
 gi|335364437|gb|AEH50382.1| ATP synthase F1 subcomplex alpha subunit [Thermotoga thermarum DSM
           5069]
          Length = 504

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +++ELAQ+RE+  FAQF S+LD AT+  + RG RL ELLKQ QY PM +EEQV V+Y GV
Sbjct: 383 LRIELAQFRELETFAQFASELDPATRAQIIRGQRLQELLKQDQYSPMPVEEQVVVLYAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD+L    +  FEK+FL +++SS   LL  I +E ++T++ + +LK  +  FL  +
Sbjct: 443 NGYLDELPVEAVRKFEKDFLDYMRSSYAHLLRKIAEEKQLTKEIEDELKKAIEEFLKGW 501


>gi|150020195|ref|YP_001305549.1| F0F1 ATP synthase subunit alpha [Thermosipho melanesiensis BI429]
 gi|166201684|sp|A6LJR3.1|ATPA_THEM4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149792716|gb|ABR30164.1| ATP synthase F1, alpha subunit [Thermosipho melanesiensis BI429]
          Length = 507

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQY+E+  FAQF ++LD ATQ  + RG RL EL+KQ QY P+ +EEQVAV+Y G+
Sbjct: 383 LKLDLAQYQELETFAQFATELDPATQAQITRGQRLMELMKQEQYSPLEVEEQVAVLYAGI 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD LD  K+  FEK FL ++K ++  LL+ I++   + E+ + +L+  + ++ + F 
Sbjct: 443 NGYLDDLDVEKVRDFEKRFLQYLKENKSELLKQIRETKDLNEELENELRNAIEDYKSEFV 502


>gi|383809827|ref|ZP_09965340.1| ATP synthase F1, alpha subunit [Rothia aeria F0474]
 gi|383447362|gb|EID50346.1| ATP synthase F1, alpha subunit [Rothia aeria F0474]
          Length = 541

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR + AFA F SDLD A++  L RG RLTELL+Q QY P A+EEQV  I+CG 
Sbjct: 394 LKLELAQYRAMEAFAMFASDLDEASKAQLTRGARLTELLRQPQYTPYAVEEQVVSIWCGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD L+ + I  FE EF+ +++     +L  I   GK+ +D    LK+ VT F   F
Sbjct: 454 NGYLDDLEVSDILRFEAEFIDYLR-HRTSVLTDIAASGKLEDDVVEALKSAVTEFKKGF 511


>gi|254470885|ref|ZP_05084288.1| ATP synthase F1, alpha subunit [Pseudovibrio sp. JE062]
 gi|374328981|ref|YP_005079165.1| F0F1 ATP synthase subunit alpha [Pseudovibrio sp. FO-BEG1]
 gi|211960027|gb|EEA95224.1| ATP synthase F1, alpha subunit [Pseudovibrio sp. JE062]
 gi|359341769|gb|AEV35143.1| F0F1 ATP synthase subunit alpha [Pseudovibrio sp. FO-BEG1]
          Length = 509

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 78/116 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K ELAQYRE+AAFAQFGSDLDA TQ+LLNRG RLTELLKQ Q+ P+  EEQVAVI+ GV
Sbjct: 390 IKGELAQYREMAAFAQFGSDLDATTQKLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGV 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G+LD    + +  FE   L  +++    LL +I ++  +  D   KLK  +  ++
Sbjct: 450 NGYLDDRPVSDVREFEAGLLRFLRAEHADLLSTIWEKKALDADLTDKLKAALDAYV 505


>gi|114762053|ref|ZP_01441521.1| F0F1 ATP synthase subunit alpha [Pelagibaca bermudensis HTCC2601]
 gi|114545077|gb|EAU48080.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. HTCC2601]
          Length = 512

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E V +I+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVCIIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
            G+LD +   ++  FE   L+ ++   + +LE I+ E  KI  +   KLK  +  F A +
Sbjct: 452 NGYLDDVPVREVGKFESALLSFLRGQRKDILEWIESEDPKIKGEPADKLKAALDEFAATY 511

Query: 120 T 120
            
Sbjct: 512 A 512


>gi|1929511|gb|AAB51464.1| ATP synthase subunit alpha [Moorella thermoacetica]
          Length = 507

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 81/120 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ  L R  R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 383 LRLDLAQYRELAAFAQFGSDLDKATQARLARAERMMEILKQDQYQPMPVEEQVVVLYAAV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD L   ++  FEK+FL  +++    +L  I+++ ++ ++   +LK  + +F  +FT
Sbjct: 443 NGFLDDLPVGRVRAFEKDFLRFLRNERPEVLAGIREKRQLDDNLQEQLKKSIEDFKGSFT 502


>gi|114524|sp|P05439.1|ATPA_RHOBL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|45977|emb|CAA77313.1| ATPase alpha subunit [Rhodobacter blasticus]
          Length = 512

 Score =  114 bits (284), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDA+TQ LLNRG RLTEL+KQ QY P+   E V +I+ G 
Sbjct: 392 VKLELAQYREMAAFAQFGSDLDASTQALLNRGARLTELMKQPQYSPLTNAEIVCIIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESI-KKEGKITEDTDAKLKTVVTNFLANF 119
            G+LDK+    +  FE   L H+++  + LL+ + K + K+  D +  ++  +  F  +F
Sbjct: 452 NGYLDKVAVRDVGRFEAGLLKHLRTKGKALLDDMTKNDRKVAGDLEKAIRAELDAFAKDF 511


>gi|226315035|ref|YP_002774931.1| ATP synthase subunit alpha [Brevibacillus brevis NBRC 100599]
 gi|254807681|sp|C0Z778.1|ATPA_BREBN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226097985|dbj|BAH46427.1| ATP synthase alpha chain [Brevibacillus brevis NBRC 100599]
          Length = 503

 Score =  114 bits (284), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/95 (58%), Positives = 71/95 (74%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLD ATQ  L RG RL E++KQGQ+ PM +E+QVA IY   
Sbjct: 383 LKLELAQYRELAAFAQFGSDLDKATQARLTRGERLMEIMKQGQFDPMPVEKQVASIYSAT 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIK 95
           RG LD +  A++  FEKE L+ + S++  LLE I+
Sbjct: 443 RGFLDDIPVAEVRRFEKEMLSFLDSNKPQLLEHIR 477


>gi|397904201|ref|ZP_10505122.1| ATP synthase alpha chain [Caloramator australicus RC3]
 gi|343178948|emb|CCC58021.1| ATP synthase alpha chain [Caloramator australicus RC3]
          Length = 503

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYRE+AAFAQF SDLD  T+Q + +G RL E+LKQ QY PM +E+Q+ ++Y  V
Sbjct: 381 LRLELAQYRELAAFAQFSSDLDKETRQRIEKGKRLIEVLKQDQYSPMDVEDQIIILYAAV 440

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
             +L+ +    I  FEKEFL +IK  E GL +SI +  ++ ++   KL   +  FLA+F
Sbjct: 441 NNYLNDIPVEAIKKFEKEFLEYIKIHEAGLRKSITERRELDDEIKNKLNKAIIEFLASF 499


>gi|385994335|ref|YP_005912633.1| F0F1 ATP synthase subunit alpha, partial [Mycobacterium
           tuberculosis CCDC5079]
 gi|339294289|gb|AEJ46400.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           CCDC5079]
          Length = 405

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 249 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 308

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 309 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 367


>gi|296170249|ref|ZP_06851842.1| ATP synthase F1 sector alpha subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895125|gb|EFG74843.1| ATP synthase F1 sector alpha subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 552

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ +FA F SDLDA ++  L RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELESFAAFASDLDATSKAQLERGERLVELLKQPQYQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE   L  I+  GK+ E+ + +L  ++ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEKFLAGIRDSGKLPEEAENQLVEIIKNFKKGF 511


>gi|238650823|ref|YP_002916678.1| F0F1 ATP synthase subunit alpha [Rickettsia peacockii str. Rustic]
 gi|259585435|sp|C4K229.1|ATPA_RICPU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|238624921|gb|ACR47627.1| F0F1 ATP synthase subunit alpha [Rickettsia peacockii str. Rustic]
          Length = 510

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKVQIDHGKRLVEILKQAQYHPFPVEEQIVSIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           + +L+ +   ++  FE + L  I+ +++ +LESIK E  ITE+T+ KLK  + NF+  F 
Sbjct: 450 KKYLNDVPLQQVKEFEDKMLTEIRLNKKDILESIKNEQCITEETEQKLKAFLENFVKEFV 509


>gi|383307178|ref|YP_005359989.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           RGTB327]
 gi|380721131|gb|AFE16240.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           RGTB327]
          Length = 538

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 511


>gi|282767710|gb|ADA85891.1| ATPase alpha subunit (mitochondrion) [Allium cepa]
          Length = 506

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ L NRG RLTE+ KQ QY P+ IE+Q+ VIY  V+
Sbjct: 391 KLELAQYREVAAFAQFGSDLDAATQALPNRGARLTEVPKQPQYSPLPIEKQIVVIYAAVK 450

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT----EDTDAKLKTVVTNFL 116
           G  D++   K+  +E+   + I      LL+S+K++G +T     + DA LK     +L
Sbjct: 451 GFCDRMPLDKMAQYERAIPSSIDPE---LLKSLKEKGGLTHERKSEPDASLKESALPYL 506


>gi|257064829|ref|YP_003144501.1| ATP synthase F1 subcomplex alpha subunit [Slackia
           heliotrinireducens DSM 20476]
 gi|256792482|gb|ACV23152.1| ATP synthase F1 subcomplex alpha subunit [Slackia
           heliotrinireducens DSM 20476]
          Length = 520

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LA YRE+ AF QFGSDLD +TQ  LNRG R+TELLKQG+Y+P+  EE+   IY G 
Sbjct: 399 LRLDLASYRELQAFTQFGSDLDKSTQDQLNRGARMTELLKQGRYMPLQFEEEACAIYAGT 458

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD +    +  F  EFL ++++S+  LLE I  + K T +++  LK  +  F   F
Sbjct: 459 KGYLDDVAVKDVVRFRGEFLDYLRASKADLLEKIHTDKKFTPESEEALKEALEAFKKQF 517


>gi|340626324|ref|YP_004744776.1| putative ATP synthase alpha chain ATPA [Mycobacterium canettii CIPT
           140010059]
 gi|433626409|ref|YP_007260038.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140060008]
 gi|433641462|ref|YP_007287221.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070008]
 gi|340004514|emb|CCC43657.1| putative ATP synthase alpha chain ATPA [Mycobacterium canettii CIPT
           140010059]
 gi|432154015|emb|CCK51242.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140060008]
 gi|432158010|emb|CCK55293.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070008]
          Length = 549

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 511


>gi|15608448|ref|NP_215824.1| Probable ATP synthase alpha chain AtpA [Mycobacterium tuberculosis
           H37Rv]
 gi|15840759|ref|NP_335796.1| ATP synthase F0F1 subunit alpha [Mycobacterium tuberculosis
           CDC1551]
 gi|31792501|ref|NP_854994.1| ATP synthase F0F1 subunit alpha [Mycobacterium bovis AF2122/97]
 gi|121637237|ref|YP_977460.1| F0F1 ATP synthase subunit alpha [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661096|ref|YP_001282619.1| ATP synthase F0F1 subunit alpha [Mycobacterium tuberculosis H37Ra]
 gi|148822526|ref|YP_001287280.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis F11]
 gi|167969636|ref|ZP_02551913.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis H37Ra]
 gi|224989712|ref|YP_002644399.1| ATP synthase F0F1 subunit alpha [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799646|ref|YP_003032647.1| ATP synthase F0F1 subunit alpha [Mycobacterium tuberculosis KZN
           1435]
 gi|254231566|ref|ZP_04924893.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis C]
 gi|254364205|ref|ZP_04980251.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550316|ref|ZP_05140763.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289442747|ref|ZP_06432491.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis T46]
 gi|289446903|ref|ZP_06436647.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis CPHL_A]
 gi|289569320|ref|ZP_06449547.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T17]
 gi|289573971|ref|ZP_06454198.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis K85]
 gi|289745054|ref|ZP_06504432.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           02_1987]
 gi|289749865|ref|ZP_06509243.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T92]
 gi|289757408|ref|ZP_06516786.1| ATP synthase F1 sector subunit alpha [Mycobacterium tuberculosis
           T85]
 gi|289761463|ref|ZP_06520841.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis GM 1503]
 gi|294994864|ref|ZP_06800555.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis 210]
 gi|297633860|ref|ZP_06951640.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           4207]
 gi|297730847|ref|ZP_06959965.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           R506]
 gi|298524812|ref|ZP_07012221.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775480|ref|ZP_07413817.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781609|ref|ZP_07419946.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784033|ref|ZP_07422355.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu003]
 gi|306792723|ref|ZP_07431025.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797128|ref|ZP_07435430.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu006]
 gi|306803008|ref|ZP_07439676.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807198|ref|ZP_07443866.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu007]
 gi|306971589|ref|ZP_07484250.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079304|ref|ZP_07488474.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083872|ref|ZP_07492985.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658180|ref|ZP_07815060.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           V2475]
 gi|339631376|ref|YP_004723018.1| ATP synthase subunit alpha [Mycobacterium africanum GM041182]
 gi|375296887|ref|YP_005101154.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           4207]
 gi|378771071|ref|YP_005170804.1| ATP synthase subunit alpha [Mycobacterium bovis BCG str. Mexico]
 gi|385990735|ref|YP_005909033.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           CCDC5180]
 gi|385998092|ref|YP_005916390.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis CTRI-2]
 gi|392386003|ref|YP_005307632.1| atpA [Mycobacterium tuberculosis UT205]
 gi|392433097|ref|YP_006474141.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           605]
 gi|397673150|ref|YP_006514685.1| ATP synthase subunit alpha [Mycobacterium tuberculosis H37Rv]
 gi|422812292|ref|ZP_16860680.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           CDC1551A]
 gi|424803654|ref|ZP_18229085.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis W-148]
 gi|424947049|ref|ZP_18362745.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           NCGM2209]
 gi|433630424|ref|YP_007264052.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070010]
 gi|433634372|ref|YP_007267999.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070017]
 gi|449063379|ref|YP_007430462.1| ATP synthase subunit alpha atpA [Mycobacterium bovis BCG str. Korea
           1168P]
 gi|54036782|sp|P63674.1|ATPA_MYCBO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54040852|sp|P63673.1|ATPA_MYCTU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512946|sp|A1KI96.1|ATPA_MYCBP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513365|sp|A5U207.1|ATPA_MYCTA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808107|sp|C1AMV2.1|ATPA_MYCBT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13880951|gb|AAK45610.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis CDC1551]
 gi|31618090|emb|CAD94201.1| PROBABLE ATP SYNTHASE ALPHA CHAIN ATPA [Mycobacterium bovis
           AF2122/97]
 gi|121492884|emb|CAL71355.1| Probable ATP synthase alpha chain atpA [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600625|gb|EAY59635.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis C]
 gi|134149719|gb|EBA41764.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505248|gb|ABQ73057.1| ATP synthase alpha chain AtpA [Mycobacterium tuberculosis H37Ra]
 gi|148721053|gb|ABR05678.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis F11]
 gi|224772825|dbj|BAH25631.1| FOF1 ATP synthase subunit alpha [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321149|gb|ACT25752.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415666|gb|EFD12906.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis T46]
 gi|289419861|gb|EFD17062.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis CPHL_A]
 gi|289538402|gb|EFD42980.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis K85]
 gi|289543074|gb|EFD46722.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T17]
 gi|289685582|gb|EFD53070.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           02_1987]
 gi|289690452|gb|EFD57881.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T92]
 gi|289708969|gb|EFD72985.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis GM 1503]
 gi|289712972|gb|EFD76984.1| ATP synthase F1 sector subunit alpha [Mycobacterium tuberculosis
           T85]
 gi|298494606|gb|EFI29900.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216027|gb|EFO75426.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325571|gb|EFP14422.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331265|gb|EFP20116.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu003]
 gi|308338889|gb|EFP27740.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342503|gb|EFP31354.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346437|gb|EFP35288.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350308|gb|EFP39159.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu008]
 gi|308358957|gb|EFP47808.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362838|gb|EFP51689.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366505|gb|EFP55356.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720265|gb|EGB29364.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902930|gb|EGE49863.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis W-148]
 gi|328459392|gb|AEB04815.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           4207]
 gi|339297928|gb|AEJ50038.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           CCDC5180]
 gi|339330732|emb|CCC26402.1| putative ATP synthase alpha chain ATPA [Mycobacterium africanum
           GM041182]
 gi|341601255|emb|CCC63928.1| probable ATP synthase alpha chain atpA [Mycobacterium bovis BCG
           str. Moreau RDJ]
 gi|344219138|gb|AEM99768.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis CTRI-2]
 gi|356593392|gb|AET18621.1| ATP synthase subunit alpha [Mycobacterium bovis BCG str. Mexico]
 gi|358231564|dbj|GAA45056.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           NCGM2209]
 gi|378544554|emb|CCE36828.1| atpA [Mycobacterium tuberculosis UT205]
 gi|379027530|dbj|BAL65263.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis str.
           Erdman = ATCC 35801]
 gi|392054506|gb|AFM50064.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           605]
 gi|395138055|gb|AFN49214.1| ATP synthase subunit alpha [Mycobacterium tuberculosis H37Rv]
 gi|432162017|emb|CCK59378.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070010]
 gi|432165965|emb|CCK63452.1| Putative ATP synthase Alpha chain AtpA [Mycobacterium canettii CIPT
           140070017]
 gi|440580784|emb|CCG11187.1| putative ATP SYNTHASE ALPHA CHAIN ATPA [Mycobacterium tuberculosis
           7199-99]
 gi|444894809|emb|CCP44065.1| Probable ATP synthase alpha chain AtpA [Mycobacterium tuberculosis
           H37Rv]
 gi|449031887|gb|AGE67314.1| ATP synthase subunit alpha atpA [Mycobacterium bovis BCG str. Korea
           1168P]
          Length = 549

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 511


>gi|306788395|ref|ZP_07426717.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu004]
 gi|306967397|ref|ZP_07480058.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu009]
 gi|308335081|gb|EFP23932.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu004]
 gi|308355009|gb|EFP43860.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu009]
          Length = 600

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 76/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ AFA F SDLDAA++  L RG RL ELLKQ Q  PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I+   K+TE+   KL  V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKLTEVIKNFKKGF 511


>gi|282767707|gb|ADA85889.1| ATPase alpha subunit (mitochondrion) [Allium cepa]
          Length = 507

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 79/119 (66%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ L NRG RLTE+ KQ QY P+ IE+Q+ VIY  V+
Sbjct: 392 KLELAQYREVAAFAQFGSDLDAATQALPNRGARLTEVPKQPQYSPLPIEKQIVVIYAAVK 451

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKIT----EDTDAKLKTVVTNFL 116
           G  D++   K+  +E+   + I      LL+S+K++G +T     + DA LK     +L
Sbjct: 452 GFCDRMPLDKMAQYERAIPSSIDPE---LLKSLKEKGGLTHERKSEPDASLKESALPYL 507


>gi|298530318|ref|ZP_07017720.1| ATP synthase F1, alpha subunit [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509692|gb|EFI33596.1| ATP synthase F1, alpha subunit [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 502

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD ATQ+ L RG RL ELLKQ QY PM+ EEQV  ++ G 
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKATQKRLTRGERLVELLKQPQYQPMSSEEQVISLFSGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD L    ++ FE E L + +S +  +L+ IK  G ++ D + ++   +  F   F
Sbjct: 442 KGYLDDLAVEDVSKFESEVLEYFRSQKPEILKEIKDTGDLSSDLENRITAAMDEFKKTF 500


>gi|229819800|ref|YP_002881326.1| F0F1 ATP synthase subunit alpha [Beutenbergia cavernae DSM 12333]
 gi|259585423|sp|C5C1U6.1|ATPA_BEUC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|229565713|gb|ACQ79564.1| ATP synthase F1, alpha subunit [Beutenbergia cavernae DSM 12333]
          Length = 544

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR + AFA F SDLDAA++  L RG  LTELLKQ QY P A+E+QVA+I+ G 
Sbjct: 394 LKLELAQYRSLEAFAMFASDLDAASRAQLKRGAALTELLKQPQYSPFAVEDQVAMIWSGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD ++ A I  FE E L H++     +L+ I   G +T++T+  L+  V +F   F 
Sbjct: 454 NGYLDDVETADIHRFESELLDHLR-RHTSVLDDIASSGLLTDETEEALRNGVESFRRTFA 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|418466585|ref|ZP_13037501.1| F0F1 ATP synthase subunit alpha [Streptomyces coelicoflavus ZG0656]
 gi|371552787|gb|EHN80019.1| F0F1 ATP synthase subunit alpha [Streptomyces coelicoflavus ZG0656]
          Length = 529

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PMA E+QV  ++ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQNQYQPMATEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++  A I+ FEKE L ++   E+GL+ SIK+  K++ DT   +   V  F   F
Sbjct: 454 NGKMDEVPVADISRFEKELLEYLHRQEQGLMTSIKEGAKMSNDTIQAIDDAVAAFKKQF 512


>gi|402574890|ref|YP_006624233.1| ATP synthase F1 subcomplex subunit alpha [Desulfosporosinus
           meridiei DSM 13257]
 gi|402256087|gb|AFQ46362.1| ATP synthase F1 subcomplex alpha subunit [Desulfosporosinus
           meridiei DSM 13257]
          Length = 502

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 76/120 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LA YRE+AAFAQFGSDLD  TQ  LNRG R  E+LKQ QY  M +EE+V VIY  V
Sbjct: 382 LRLDLASYRELAAFAQFGSDLDKVTQMRLNRGKRTMEILKQNQYATMPVEEEVVVIYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G  D +D  KI  FE+E+L  ++S +  LL  I+ E  ++ D  A L+  +  F   F 
Sbjct: 442 KGFTDDIDADKIGKFEQEYLRFMRSVKADLLAKIRTEKALSNDMIADLEKAINEFKQGFV 501


>gi|302536954|ref|ZP_07289296.1| ATP synthase F1, alpha subunit [Streptomyces sp. C]
 gi|302445849|gb|EFL17665.1| ATP synthase F1, alpha subunit [Streptomyces sp. C]
          Length = 531

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 75/119 (63%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQYRE+ AFA FGSDLDAA++  L RG R+ ELLKQGQY PM +EEQV  ++ G 
Sbjct: 394 LRVDLAQYRELEAFAAFGSDLDAASKASLERGKRMVELLKQGQYQPMPVEEQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    I  FE E L H++   + LL SI   GK+++DT   +   +  F   F
Sbjct: 454 TGKMDDVPVEDIRRFESELLEHLRRERKDLLTSIADGGKMSDDTLGSIADAIAAFKRQF 512


>gi|302558370|ref|ZP_07310712.1| ATP synthase F1, alpha subunit [Streptomyces griseoflavus Tu4000]
 gi|302475988|gb|EFL39081.1| ATP synthase F1, alpha subunit [Streptomyces griseoflavus Tu4000]
          Length = 530

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PMA E+QV  ++ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQNQYEPMATEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    I  FEKE L H+   E+GL+ SIK+  K+++DT   +   V  F   F
Sbjct: 454 TGRMDDVPVVDIRRFEKELLEHLHRKEQGLMTSIKEGAKMSDDTIQAIADAVAEFKKQF 512


>gi|336179668|ref|YP_004585043.1| ATP synthase subunit alpha [Frankia symbiont of Datisca glomerata]
 gi|334860648|gb|AEH11122.1| ATP synthase subunit alpha [Frankia symbiont of Datisca glomerata]
          Length = 550

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/119 (44%), Positives = 81/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AF+ FGSDLD A++  L+RG RL ELLKQ Q+ P ++E +V  I+ G 
Sbjct: 394 LRLDLAQYRELEAFSAFGSDLDKASRAQLDRGARLVELLKQPQFQPFSVEREVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD++    I  FE EFL  ++ ++ GL ++I++ GK+ +DT A L+ ++  F   F
Sbjct: 454 TGHLDEVPIGDIRRFESEFLEFVERTQPGLFKTIRETGKLDDDTLAALEHLIAKFKTEF 512


>gi|392395557|ref|YP_006432159.1| ATP synthase F1 subcomplex subunit alpha [Desulfitobacterium
           dehalogenans ATCC 51507]
 gi|390526635|gb|AFM02366.1| ATP synthase F1 subcomplex alpha subunit [Desulfitobacterium
           dehalogenans ATCC 51507]
          Length = 502

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 82/121 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFAQFGSDLD  TQ  L RG R+ E+LKQ QY PM +EEQV V+Y  V
Sbjct: 382 LRLDLAQYRELAAFAQFGSDLDKITQMRLTRGERMMEILKQKQYEPMVVEEQVVVLYAAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +   KI +FE+E+L  +++++  LL  I+ E  + ++ +A+++  +      F 
Sbjct: 442 KGFLDDIPVDKIKSFEEEYLRTMRTTKADLLARIRTEKALNDELNAEIEKAIIEVKEGFL 501

Query: 121 G 121
           G
Sbjct: 502 G 502


>gi|373456447|ref|ZP_09548214.1| ATP synthase subunit alpha [Caldithrix abyssi DSM 13497]
 gi|371718111|gb|EHO39882.1| ATP synthase subunit alpha [Caldithrix abyssi DSM 13497]
          Length = 506

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFA+FGSDLD  TQQ L RG RL E+LKQ QY P+  E+Q+A+IY G 
Sbjct: 384 LRLDLAQYREMEAFAKFGSDLDETTQQQLRRGERLVEILKQDQYRPIPFEKQIAIIYAGT 443

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G LDKL    +  FE EF+ +++     LL  + ++  +T++   K+  V+  F+ANF
Sbjct: 444 NGFLDKLPVGVLKRFETEFIEYLEMKHADLLSEVAEKKILTDEWREKMNKVLETFIANF 502


>gi|297559314|ref|YP_003678288.1| ATP synthase F1 subunit alpha [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843762|gb|ADH65782.1| ATP synthase F1, alpha subunit [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 546

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L LAQYRE+ AF+ FGSDLDA ++Q L RG RL ELLKQGQY P ++E+QV  I+ G 
Sbjct: 394 LRLGLAQYRELEAFSAFGSDLDAVSKQQLERGARLMELLKQGQYSPFSMEKQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    +  FE++FL H+    +G+L++I++ GK  ++T+  L + +  F   F
Sbjct: 454 TGRVDDVPVEDVRRFEEDFLDHLSREHQGILDTIRESGKFEDETEKSLDSALEKFKQGF 512


>gi|148284339|ref|YP_001248429.1| ATP synthase F0F1 subunit alpha [Orientia tsutsugamushi str.
           Boryong]
 gi|158514260|sp|A5CD07.1|ATPA_ORITB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146739778|emb|CAM79644.1| H(+)-transporting two-sector ATPase F(1) alpha subunit [Orientia
           tsutsugamushi str. Boryong]
          Length = 512

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 78/116 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQY E+ AF+QFG+DLD+++ QL+NRG RL+ELLKQ QY P  +EEQ+ V++ G+
Sbjct: 390 VKLELAQYHEMEAFSQFGADLDSSSMQLINRGRRLSELLKQSQYCPFPVEEQIIVLFAGI 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
            G+LDK+  +K+  FE   L + +     ++  I    KITE   +KL  ++  F+
Sbjct: 450 NGYLDKIAVSKVKEFENNMLEYFRIHNPDIMNEIINTKKITEIISSKLHQILQEFV 505


>gi|340029094|ref|ZP_08665157.1| F0F1 ATP synthase subunit alpha [Paracoccus sp. TRP]
          Length = 511

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 73/99 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+AAFAQFGSDLDAATQ+LLNRG RLTEL+KQ QY P+   E V VIY G 
Sbjct: 391 VKLELAQYREMAAFAQFGSDLDAATQKLLNRGARLTELMKQPQYSPLTNAEIVIVIYAGT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGK 99
           +G+LD +    +T +E+  + ++++ +  LLE + K  +
Sbjct: 451 KGYLDSIPVRDVTKWERGLIQYLRNQKADLLEDMTKNDR 489


>gi|313891438|ref|ZP_07825054.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
 gi|313120213|gb|EFR43389.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
          Length = 514

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 81/115 (70%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+AAFAQFGSDLDAAT+  ++RG R TE+LKQ QY P  +E+QV  IY GV
Sbjct: 382 LRLDLAQFRELAAFAQFGSDLDAATKAQIDRGQRTTEILKQPQYNPYPVEDQVMAIYVGV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           +G+LD ++  ++  FEK+ L  + ++   + ESI+ E K+ E T+  L+  +  F
Sbjct: 442 KGYLDDIEVDEVVNFEKQLLDFMHTNHPEVGESIRTEKKLIEATEENLRKAIAEF 496


>gi|239616627|ref|YP_002939949.1| F0F1 ATP synthase subunit alpha [Kosmotoga olearia TBF 19.5.1]
 gi|259585431|sp|C5CIV6.1|ATPA_KOSOT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239505458|gb|ACR78945.1| ATP synthase F1, alpha subunit [Kosmotoga olearia TBF 19.5.1]
          Length = 502

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+ AFAQF ++LD ATQ  L RG +LTELLKQ QY PM +EEQ+AV+Y G 
Sbjct: 382 LRLDLAQYRELLAFAQFSTELDKATQAQLIRGEKLTELLKQEQYSPMPVEEQIAVLYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           RG+LD L   KI  FEK+ L  ++     +L++I+++  +TE+ +A LK  V +    F 
Sbjct: 442 RGYLDDLPTDKIRQFEKQLLQTMRQKYADVLKAIREKKDMTEEIEAGLKKAVEDVRQAFV 501


>gi|160902213|ref|YP_001567794.1| ATP synthase F1 subunit alpha [Petrotoga mobilis SJ95]
 gi|189081307|sp|A9BFX5.1|ATPA_PETMO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160359857|gb|ABX31471.1| ATP synthase F1, alpha subunit [Petrotoga mobilis SJ95]
          Length = 504

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQYRE+ +F QF +DLD AT++ L +G +LTEL+KQ QY PM +EEQVAVIY   
Sbjct: 385 LKLDLAQYRELESFTQFAADLDEATKKQLTKGEKLTELMKQPQYSPMEMEEQVAVIYAAN 444

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD++   +I+ FE++FLA++K + R  L  I++   I ++   +L   ++ FL  F
Sbjct: 445 EGYLDQIPTDRISDFERQFLAYLKENYRDTLNKIRESKDIADEIKKELNEAISKFLNVF 503


>gi|443624141|ref|ZP_21108620.1| putative ATP synthase F1, alpha subunit [Streptomyces
           viridochromogenes Tue57]
 gi|443342338|gb|ELS56501.1| putative ATP synthase F1, alpha subunit [Streptomyces
           viridochromogenes Tue57]
          Length = 535

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PM+ E+QV  ++ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQAQYQPMSTEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +  A I  FEKE L ++   E+GL+ SIK+ GK+++DT   +   +  F   F
Sbjct: 454 TGKMDDVPVADIRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDTLTAVADAIAEFKKQF 512


>gi|403173588|ref|XP_003332638.2| hypothetical protein PGTG_14303 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375170612|gb|EFP88219.2| hypothetical protein PGTG_14303 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 852

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/91 (59%), Positives = 70/91 (76%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYR+VAAFAQFGSDLDA+T+ LL+RG RLTELLKQGQY P+A + QV ++Y GV
Sbjct: 702 LKLYLAQYRDVAAFAQFGSDLDASTRYLLSRGARLTELLKQGQYQPLAFKVQVPILYAGV 761

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLL 91
            G LDK+   KI +++  F  H+K+ +  LL
Sbjct: 762 NGMLDKVPVKKIVSWDLAFRDHLKNEQSALL 792


>gi|372279221|ref|ZP_09515257.1| F0F1 ATP synthase subunit alpha [Oceanicola sp. S124]
          Length = 512

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 1/120 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+TQ+LL RG RLTEL+KQ QY P+   E V VI+ G 
Sbjct: 392 VKLSLAQYREMAAFAQFGSDLDASTQRLLARGARLTELMKQPQYQPLTNAEIVCVIFAGT 451

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKE-GKITEDTDAKLKTVVTNFLANF 119
            G+LDK+  +++  +E E L+ +++ +  +L  I  E  KI  +   KLK V+  F A+F
Sbjct: 452 NGYLDKVPVSEVGRYEAELLSFLRNKKADVLAWITNEDPKIKGEPADKLKAVLDEFAADF 511


>gi|114408|sp|P05492.1|ATPAM_OENBI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13165|emb|CAA27656.1| unnamed protein product [Oenothera biennis]
          Length = 511

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 7/113 (6%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+LKQ QY P+ IE+Q+ VIY  V
Sbjct: 393 LKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEILKQPQYAPLPIEKQIIVIYAAV 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLK 109
            G  D++   +I+ +E+     +K     LL+S+ ++G +      + DA LK
Sbjct: 453 NGFCDRMPLDRISQYERAIPQSVKQE---LLQSLVEKGGLNNERKIEPDAFLK 502


>gi|206603288|gb|EDZ39768.1| ATP synthase F1, alpha subunit [Leptospirillum sp. Group II '5-way
           CG']
          Length = 512

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 84/115 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LE+AQ+RE+AAFAQF SDLD  T+  + RG+RLTE+LKQ  Y P+++E+Q+A+I+   
Sbjct: 391 LRLEMAQFRELAAFAQFASDLDKTTRDQIERGLRLTEILKQPHYSPISVEKQIAIIFAAT 450

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
            G LD + P  +  +EKE   ++ ++ + +L++I++E  ++E T  +LKT+++NF
Sbjct: 451 NGFLDSIKPGSVQRYEKELSIYLDTNGKEILKAIQEEKTLSEKTTDQLKTLLSNF 505


>gi|269837452|ref|YP_003319680.1| ATP synthase F1 subunit alpha [Sphaerobacter thermophilus DSM
           20745]
 gi|269786715|gb|ACZ38858.1| ATP synthase F1, alpha subunit [Sphaerobacter thermophilus DSM
           20745]
          Length = 507

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/115 (46%), Positives = 85/115 (73%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++LELAQYR +AAFAQFGSDLD AT++ ++RG RLTE+LKQ QY PM +EEQVA+I+   
Sbjct: 382 LRLELAQYRSLAAFAQFGSDLDPATKRQIDRGQRLTEVLKQPQYQPMPVEEQVAIIWVAT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
            G+LD++   ++  FE+++L ++++S+  LL+ I  E +++++   +L+  V  F
Sbjct: 442 NGYLDEVPVERVRAFEEQYLDYMRTSKADLLQRIVTEKQLSDEMIEELRKSVEEF 496


>gi|319997184|gb|ADV91186.1| mitochondrial ATP synthase F1 alpha subunit-like protein 1
           [Karlodinium micrum]
          Length = 549

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 78/117 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYREVAAFAQFGSDLDA+TQQ L RG  LTELLKQ Q+VPM   E +A ++ G 
Sbjct: 424 LKLELAQYREVAAFAQFGSDLDASTQQQLLRGGILTELLKQKQFVPMKTSEIIASLWAGT 483

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLA 117
            G LDK+   +I  FE  +L H+KS+    LE I  + ++T++     KT +  F+ 
Sbjct: 484 NGFLDKIAAKEILRFEALWLDHLKSTRASTLEEIMVKKQMTDEITTGFKTAMDEFVG 540


>gi|145220431|ref|YP_001131140.1| F0F1 ATP synthase subunit alpha [Chlorobium phaeovibrioides DSM
           265]
 gi|189081309|sp|A4SGM9.1|ATPA_PROVI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145206595|gb|ABP37638.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 526

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF++FGSDLD  T+  L+RG RL E+LKQGQY+PM +E+QVA+I+ G 
Sbjct: 402 LRLDLAQFRELEAFSKFGSDLDKTTKAQLDRGARLVEILKQGQYIPMPVEKQVAIIFLGT 461

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +G LD +    I  FE++FLA ++     +L+SI+++G +  DT   LK     F+  F 
Sbjct: 462 QGLLDAVAVDHIRKFEEDFLAMLELKHPEILKSIEEKGSLEPDTANGLKEAAAKFIITFN 521


>gi|51599163|gb|AAU08239.1| ATP synthase alpha chain [Nonomuraea sp. ATCC 39727]
          Length = 549

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 81/120 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L L+QYR++ AFA F SDLDAA++  L RG RL ELLKQ QY P ++E +VA I+ G 
Sbjct: 394 LRLSLSQYRDLEAFAAFASDLDAASKAQLERGQRLVELLKQAQYSPFSLEREVASIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD++    +  FE EFL +I+SS +G+ ++I++  ++++DT   LK  +T F   FT
Sbjct: 454 TGELDEVPIEDVRRFEGEFLDYIQSSHKGIFDTIRETRELSDDTVTALKDAITEFKKGFT 513


>gi|161986640|ref|YP_832086.2| F0F1 ATP synthase subunit alpha [Arthrobacter sp. FB24]
 gi|190358293|sp|A0JY66.2|ATPA_ARTS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 545

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E QV  I+ G 
Sbjct: 394 LKLELAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVENQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I+ FE EFL H+K  +  +L ++ +   + +DT   LKT +  F   F 
Sbjct: 454 NGYLDDVPVEDISRFETEFLEHLK-HKSSILTTLAQTNVMDDDTAEALKTSIVAFKKGFF 512

Query: 121 G 121
           G
Sbjct: 513 G 513


>gi|401563954|ref|ZP_10804878.1| ATP synthase F1, alpha subunit [Selenomonas sp. FOBRC6]
 gi|400189299|gb|EJO23404.1| ATP synthase F1, alpha subunit [Selenomonas sp. FOBRC6]
          Length = 505

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 76/115 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           M+L+LAQYRE+AAFAQFGSDLD AT+  L+RG R+ E LKQ QY P+++ EQV VI+  V
Sbjct: 382 MRLDLAQYRELAAFAQFGSDLDKATKAQLDRGARMVETLKQAQYSPLSVAEQVLVIFTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNF 115
           RGHL  +   K+ TF  +FL  ++SS   +  +I  + K+ +  +A +   +  F
Sbjct: 442 RGHLTDIPVGKVVTFHTDFLKFMRSSHPEIASAITSQQKLDDALEANITAAIAEF 496


>gi|116611262|gb|ABK03986.1| ATP synthase F1 subcomplex alpha subunit [Arthrobacter sp. FB24]
          Length = 556

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 1/121 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR++ AFA F SDLDAA++Q L RG RL ELLKQGQY P  +E QV  I+ G 
Sbjct: 405 LKLELAQYRDMQAFAMFASDLDAASRQQLTRGARLMELLKQGQYSPFPVENQVVSIWAGT 464

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD +    I+ FE EFL H+K  +  +L ++ +   + +DT   LKT +  F   F 
Sbjct: 465 NGYLDDVPVEDISRFETEFLEHLK-HKSSILTTLAQTNVMDDDTAEALKTSIVAFKKGFF 523

Query: 121 G 121
           G
Sbjct: 524 G 524


>gi|145519423|ref|XP_001445578.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413033|emb|CAK78181.1| unnamed protein product [Paramecium tetraurelia]
          Length = 612

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 75/97 (77%)

Query: 20  DLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVRGHLDKLDPAKITTFEKEF 79
           +LDAATQQLLNRG +LTELLKQ QYVPM  EEQV VIY GVRG LDK+  ++I  FE++F
Sbjct: 507 NLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGVRGFLDKVQTSEIAKFEEKF 566

Query: 80  LAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFL 116
           L H++++   +LE I+  G++++  DA+LK+++  F+
Sbjct: 567 LTHLRTNYPAMLERIRSTGELSKQDDAELKSILEVFI 603


>gi|164657506|ref|XP_001729879.1| hypothetical protein MGL_2865 [Malassezia globosa CBS 7966]
 gi|159103773|gb|EDP42665.1| hypothetical protein MGL_2865 [Malassezia globosa CBS 7966]
          Length = 532

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 6/122 (4%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL LAQYRE+AAFAQFGSDLDA+T+  LNRG RLTELLKQ QY P+A+E QV +IY G+
Sbjct: 413 LKLYLAQYRELAAFAQFGSDLDASTRYTLNRGARLTELLKQRQYSPLAVEIQVPIIYAGI 472

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAK----LKTVVTNFL 116
           +G LD++   KI  +E  +   + +S+  LL  I K G +T + + K    +K  V++FL
Sbjct: 473 KGLLDEIPVDKIVAWETGYREEL-ASQNDLLSEISK-GVMTPEVEEKIANSIKASVSSFL 530

Query: 117 AN 118
            N
Sbjct: 531 GN 532


>gi|281412616|ref|YP_003346695.1| ATP synthase F1, alpha subunit [Thermotoga naphthophila RKU-10]
 gi|281373719|gb|ADA67281.1| ATP synthase F1, alpha subunit [Thermotoga naphthophila RKU-10]
          Length = 503

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQYRE+  FAQF ++LD AT+  + RG RL ELLKQ QY PM +EEQV V++ GV
Sbjct: 383 LRIDLAQYRELETFAQFATELDPATRAQIIRGQRLMELLKQEQYSPMPVEEQVVVLFVGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD L   ++  FEKEFL  +    + +L+ IK + ++T +T+ KLK  +  F   F
Sbjct: 443 RGYLDDLPVEEVRRFEKEFLRFMHEKHQDILDDIKTKKELTSETEEKLKKAIEEFKTTF 501


>gi|422325040|ref|ZP_16406077.1| ATP synthase subunit alpha [Rothia mucilaginosa M508]
 gi|353343749|gb|EHB88064.1| ATP synthase subunit alpha [Rothia mucilaginosa M508]
          Length = 541

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYR + AFA F SDLD AT+  L RG RLTELL+Q QY P A+EEQV  I+ G 
Sbjct: 394 LKLELAQYRSMEAFAMFASDLDDATKAQLTRGSRLTELLRQPQYTPYAVEEQVVSIWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD ++ + +  FE+ F+ +++  +  +L  I   GK+ +DT A LK+ V +F   F
Sbjct: 454 SGHLDDIEISDVLRFEEGFIEYLR-HKTSVLTDIASSGKLEDDTVAALKSAVADFKQGF 511


>gi|383501206|ref|YP_005414565.1| F0F1 ATP synthase subunit alpha [Rickettsia australis str. Cutlack]
 gi|378932217|gb|AFC70722.1| F0F1 ATP synthase subunit alpha [Rickettsia australis str. Cutlack]
          Length = 512

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+RE+ +F+QFGSDLD AT+  ++ G RL E+LKQ QY P  +EEQ+  IY G 
Sbjct: 390 VKLELAQFRELESFSQFGSDLDPATKAQIDHGKRLVEILKQAQYHPFPVEEQIISIYVGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           + +L+ +    +  FE + L  I+ +++ +LESIK E +ITE+T+ KLK  + NF+  +
Sbjct: 450 KKYLNDVPLQTVKEFEDKMLTEIRLNKKDILESIKNEQRITEETEQKLKAFLENFVKAY 508


>gi|217076681|ref|YP_002334397.1| F0F1 ATP synthase subunit alpha [Thermosipho africanus TCF52B]
 gi|419759463|ref|ZP_14285762.1| F0F1 ATP synthase subunit alpha [Thermosipho africanus H17ap60334]
 gi|226739951|sp|B7IG42.1|ATPA_THEAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217036534|gb|ACJ75056.1| ATP synthase F1, alpha subunit [Thermosipho africanus TCF52B]
 gi|407515473|gb|EKF50218.1| F0F1 ATP synthase subunit alpha [Thermosipho africanus H17ap60334]
          Length = 507

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 81/120 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KL+LAQY+E+  FAQF ++LD ATQ  + RG RL EL+KQ QY PM +EEQVAV+Y G+
Sbjct: 383 LKLDLAQYQELETFAQFATELDPATQAQITRGQRLMELMKQEQYAPMEVEEQVAVLYAGI 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD L+  K+  FEK+ +  +K  +  +L  I++E  ++E+T+  LK  +  F + F 
Sbjct: 443 NGYLDDLEVEKVRLFEKKLIEFLKDKKSEILNKIREEKDLSEETEKMLKEAIEEFKSEFV 502


>gi|297202401|ref|ZP_06919798.1| ATP synthase F1, alpha subunit [Streptomyces sviceus ATCC 29083]
 gi|197710078|gb|EDY54112.1| ATP synthase F1, alpha subunit [Streptomyces sviceus ATCC 29083]
          Length = 529

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQ+RE+ AFA FGSDLDAA++  L RG R+ ELLKQ QY PMA E+QV  ++ G 
Sbjct: 394 LRVDLAQFRELEAFAAFGSDLDAASKAQLERGQRMVELLKQAQYQPMATEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D +    I  FEKE L ++   E+GL+ SIK+ GK+++DT   +   + +F   F
Sbjct: 454 TGKMDDVPVNDIRRFEKELLEYLHRKEQGLMTSIKEGGKMSDDTLTAVADAIADFKKQF 512


>gi|433649343|ref|YP_007294345.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium smegmatis
           JS623]
 gi|433299120|gb|AGB24940.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium smegmatis
           JS623]
          Length = 548

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+QYRE+ +FA F SDLDA ++  L RG RL ELLKQ QY P+A+EEQV  I+ G 
Sbjct: 393 LRLDLSQYRELESFAAFASDLDATSKAQLERGARLVELLKQPQYQPLAVEEQVVSIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L H+++SE  +L  I++ GK+ ++   KL  V+  F   F
Sbjct: 453 EGHLDSVPVEDVGRFEAELLDHVRASEGEILTQIRESGKLGDELSEKLVEVINQFKKGF 511


>gi|15644360|ref|NP_229412.1| F0F1 ATP synthase subunit alpha [Thermotoga maritima MSB8]
 gi|148270309|ref|YP_001244769.1| F0F1 ATP synthase subunit alpha [Thermotoga petrophila RKU-1]
 gi|170289064|ref|YP_001739302.1| F0F1 ATP synthase subunit alpha [Thermotoga sp. RQ2]
 gi|403253508|ref|ZP_10919809.1| F0F1 ATP synthase subunit alpha [Thermotoga sp. EMP]
 gi|418045671|ref|ZP_12683766.1| ATP synthase subunit alpha [Thermotoga maritima MSB8]
 gi|81625467|sp|Q9X1U7.1|ATPA_THEMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201685|sp|A5ILX0.1|ATPA_THEP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739952|sp|B1LBC1.1|ATPA_THESQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|4982184|gb|AAD36679.1|AE001805_4 ATP synthase F1, subunit alpha [Thermotoga maritima MSB8]
 gi|147735853|gb|ABQ47193.1| ATP synthase F1, alpha subunit [Thermotoga petrophila RKU-1]
 gi|170176567|gb|ACB09619.1| ATP synthase F1, alpha subunit [Thermotoga sp. RQ2]
 gi|351676556|gb|EHA59709.1| ATP synthase subunit alpha [Thermotoga maritima MSB8]
 gi|402811042|gb|EJX25530.1| F0F1 ATP synthase subunit alpha [Thermotoga sp. EMP]
          Length = 503

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 80/119 (67%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++++LAQYRE+  FAQF ++LD AT+  + RG RL ELLKQ QY PM +EEQV V++ GV
Sbjct: 383 LRIDLAQYRELETFAQFATELDPATRAQIIRGQRLMELLKQEQYSPMPVEEQVVVLFAGV 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           RG+LD L   ++  FEKEFL  +    + +L+ IK + ++T +T+ KLK  +  F   F
Sbjct: 443 RGYLDDLPVEEVRRFEKEFLRFMHEKHQDILDDIKTKKELTSETEEKLKKAIEEFKTTF 501


>gi|347757448|ref|YP_004865010.1| ATP synthase F1 subunit alpha [Micavibrio aeruginosavorus ARL-13]
 gi|347589966|gb|AEP09008.1| ATP synthase F1, alpha subunit [Micavibrio aeruginosavorus ARL-13]
          Length = 516

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 85/119 (71%), Gaps = 4/119 (3%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+ AFAQF SDLDA+TQ+LL RG RLT+LL Q QY PM +EEQV VI+ G 
Sbjct: 390 IKLELAQYREMEAFAQFASDLDASTQKLLARGARLTQLLVQPQYQPMPVEEQVLVIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G LD +  A +  +E+  L  ++++ + +L++I+ E  +++    KL+  ++++L+ F
Sbjct: 450 KGFLDSVPVASVREYERRLLEDVRANGKHILDAIRTEKALSD----KLQKDLSDYLSQF 504


>gi|218439572|ref|YP_002377901.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 7424]
 gi|226739866|sp|B7KKR4.1|ATPA_CYAP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218172300|gb|ACK71033.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7424]
          Length = 503

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 82/120 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQ+ E+ AF+QF SDLDAATQ  L RG RL E+LKQ Q  P+A+ EQVA++Y G+
Sbjct: 383 LKLELAQFAELEAFSQFASDLDAATQAQLARGQRLREVLKQPQNSPLAVWEQVAIVYAGL 442

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G+LD + PA++TTF +    ++++S+    E +  E K+T++ ++ LK  +  F   FT
Sbjct: 443 NGYLDDIPPAQVTTFTQGLRDYLRNSKPKFPEIVGNEKKLTDEAESLLKEAIGEFKQGFT 502


>gi|254821307|ref|ZP_05226308.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare ATCC
           13950]
 gi|379746327|ref|YP_005337148.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare ATCC
           13950]
 gi|379760791|ref|YP_005347188.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare
           MOTT-64]
 gi|387874731|ref|YP_006305035.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. MOTT36Y]
 gi|443304663|ref|ZP_21034451.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. H4Y]
 gi|378798691|gb|AFC42827.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare ATCC
           13950]
 gi|378808733|gb|AFC52867.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare
           MOTT-64]
 gi|386788189|gb|AFJ34308.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. MOTT36Y]
 gi|442766227|gb|ELR84221.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. H4Y]
          Length = 551

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+Q+RE+ +FA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQFRELESFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL  I+   K++++   +L+ V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEEKLLSGIRDTQKLSDEAAEELEKVINNFKKGF 511


>gi|291454170|ref|ZP_06593560.1| F0F1 ATP synthase subunit alpha [Streptomyces albus J1074]
 gi|359148980|ref|ZP_09182061.1| F0F1 ATP synthase subunit alpha [Streptomyces sp. S4]
 gi|421741282|ref|ZP_16179488.1| proton translocating ATP synthase, F1 alpha subunit [Streptomyces
           sp. SM8]
 gi|291357119|gb|EFE84021.1| F0F1 ATP synthase subunit alpha [Streptomyces albus J1074]
 gi|406690313|gb|EKC94128.1| proton translocating ATP synthase, F1 alpha subunit [Streptomyces
           sp. SM8]
          Length = 530

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 79/119 (66%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AFA FGSDLDAA++Q L RG RL ELLKQ QY PM  E+QV  ++ G 
Sbjct: 394 LRLDLAQFREMEAFATFGSDLDAASKQQLARGQRLVELLKQDQYQPMPTEDQVVSVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G +D++    +  FE+E L ++   E+GL+ SIK+ GK+++DT   +   +  F   F
Sbjct: 454 TGKMDEVPVGDVRRFERELLDYLHRQEQGLMTSIKEGGKMSDDTLVAVGDAIAAFKKQF 512


>gi|379753599|ref|YP_005342271.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare
           MOTT-02]
 gi|378803815|gb|AFC47950.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare
           MOTT-02]
          Length = 551

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+Q+RE+ +FA F SDLDA ++  L+RG RL ELLKQ QY PM +EEQV  I+ G 
Sbjct: 393 LRLDLSQFRELESFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            GHLD +    +  FE E L HI++SE  LL  I+   K++++   +L+ V+ NF   F
Sbjct: 453 GGHLDSVPVEDVRRFETELLDHIRASEEKLLSGIRDTQKLSDEAAEELEKVINNFKKGF 511


>gi|365827793|ref|ZP_09369637.1| ATP synthase subunit alpha [Actinomyces sp. oral taxon 849 str.
           F0330]
 gi|365264722|gb|EHM94515.1| ATP synthase subunit alpha [Actinomyces sp. oral taxon 849 str.
           F0330]
          Length = 543

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 1/119 (0%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +K+ LAQYR + AFA F SDLDAAT+  L RG RL ELLKQ QY P  + EQVA ++ G 
Sbjct: 394 LKITLAQYRSMQAFAMFASDLDAATRAQLTRGERLMELLKQPQYTPYPVAEQVASVWAGT 453

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LD LD A +  FE+ FL H++ +   +L+ I+  G+++E+TDA L   V  F   F
Sbjct: 454 KGYLDDLDVADVLPFEEAFLDHLRRNTD-ILDDIESTGELSEETDAALVKAVEAFRRTF 511


>gi|297569853|ref|YP_003691197.1| ATP synthase F1, alpha subunit [Desulfurivibrio alkaliphilus AHT2]
 gi|296925768|gb|ADH86578.1| ATP synthase F1, alpha subunit [Desulfurivibrio alkaliphilus AHT2]
          Length = 507

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 82/119 (68%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQYRE+AAFA FGSDLDAATQ  L RG RL E+LKQ QY P+ +E+QV++I+ G 
Sbjct: 382 LRLDLAQYRELAAFAGFGSDLDAATQAQLTRGARLVEILKQPQYQPLPMEKQVSIIFAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
           +G+LDKL    I  +E +   +I+ ++  + + +K + +I  D +AKL+  +  F  +F
Sbjct: 442 KGYLDKLPLEAIADYEAQLFDYIEKNDPTVFDDLKSKQEIDSDLEAKLRKALDAFGESF 500


>gi|340748033|gb|AEK66750.1| ATPase subunit 1 [Ferrocalamus rimosivaginus]
 gi|372861939|gb|AEX98090.1| ATPase subunit 1 (mitochondrion) [Ferrocalamus rimosivaginus]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNFL 116
           G  D++   +I+ +EK  L+ I      L +S  ++G +T     + DA LK     +L
Sbjct: 454 GFCDRMPLDRISQYEKAILSTINPE---LKKSFLEKGGLTNERKMEPDASLKETAKPYL 509


>gi|121534925|ref|ZP_01666744.1| ATP synthase F1, alpha subunit [Thermosinus carboxydivorans Nor1]
 gi|121306524|gb|EAX47447.1| ATP synthase F1, alpha subunit [Thermosinus carboxydivorans Nor1]
          Length = 513

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L++AQYRE+AAFAQFGSDLD AT+ L++RG R  E+LKQ QY PM +EEQV VIY  V
Sbjct: 382 LRLDMAQYRELAAFAQFGSDLDKATKALIDRGQRTLEILKQPQYAPMPVEEQVMVIYTAV 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
            G LD +  A +T FE++FL  ++++   + ++I+++  I  +T+A L+  +  F   F 
Sbjct: 442 NGFLDDVAVADVTKFEQDFLKFMRANYAEIGKTIREKKVIDSETEAALQKAIKEFKDTFV 501


>gi|255591651|ref|XP_002535554.1| ATP synthase, putative [Ricinus communis]
 gi|223522668|gb|EEF26828.1| ATP synthase, putative [Ricinus communis]
          Length = 362

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 79/119 (66%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAA AQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 247 KLELAQYREVAALAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVN 306

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNFL 116
           G  D++   +I+ +E+   + IK     LL+S+ ++G +T     + DA LK     FL
Sbjct: 307 GFCDRMPLDRISQYERAIPSSIKPE---LLKSLLEKGGLTNERKMEPDAFLKENALTFL 362


>gi|164422240|gb|ABY55213.1| Atp1 [Bambusa oldhamii]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 7/119 (5%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITE----DTDAKLKTVVTNFL 116
           G  D++   +I+ +EK  L+ I      L +S  ++G +T     + DA LK     +L
Sbjct: 454 GFCDRMPLDRISQYEKAILSTINPE---LQKSFLEKGGLTNERKMEPDASLKETALPYL 509


>gi|114404|sp|P18260.1|ATPAM_HELAN RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|12986|emb|CAA39428.1| F1 ATPase [Helianthus annuus]
 gi|12989|emb|CAA37022.1| unnamed protein product [Helianthus annuus]
 gi|758362|emb|CAA37613.1| F1 ATPase [Helianthus annuus]
          Length = 510

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 74/102 (72%), Gaps = 3/102 (2%)

Query: 2   KLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGVR 61
           KLELAQYREVAA AQFGSDLDAATQ LLNRG RLTE+ KQ QY P+ IE+Q+ VIY  V 
Sbjct: 394 KLELAQYREVAALAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVN 453

Query: 62  GHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITED 103
           G  D++   +I+ +E+  L  IK+    LL+S+ ++G +T +
Sbjct: 454 GFCDRMPLDRISQYERAILKSIKTE---LLQSLLEKGGLTNE 492


>gi|256380131|ref|YP_003103791.1| F0F1 ATP synthase subunit alpha [Actinosynnema mirum DSM 43827]
 gi|255924434|gb|ACU39945.1| ATP synthase F1, alpha subunit [Actinosynnema mirum DSM 43827]
          Length = 548

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 78/120 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+L+Q+RE+ AF+ F SDLDAA++  L+RG RL ELLKQGQY P+ +EEQV  IY G 
Sbjct: 393 LRLDLSQFRELEAFSAFASDLDAASRAQLDRGARLVELLKQGQYSPVPMEEQVVSIYLGT 452

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANFT 120
           +GH D +    +  FE EFL H++ +   +L SI+   K+++D +  +   V  F   FT
Sbjct: 453 KGHFDSVAIGDVRRFEGEFLDHLRRNHDVVLSSIRDTKKLSDDAEKGIVDAVNAFKKQFT 512


>gi|452944202|ref|YP_007500367.1| ATP synthase F1, alpha subunit [Hydrogenobaculum sp. HO]
 gi|452882620|gb|AGG15324.1| ATP synthase F1, alpha subunit [Hydrogenobaculum sp. HO]
          Length = 502

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 78/119 (65%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           ++L+LAQ+RE+ AF QF SDLD ATQ  +NRG+RL ELLKQG Y P+ +E+QV  IY G 
Sbjct: 382 LRLDLAQFRELEAFMQFASDLDKATQDTINRGLRLVELLKQGPYSPIPVEKQVIAIYAGT 441

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +  + +  FE E    + ++ + LL+ +K +  I +   AKLKT +  F A+F
Sbjct: 442 NGYLDDIPVSSVRKFEMELYGFLDANFKDLLDELKTKKAIDDSVKAKLKTALDKFKASF 500


>gi|103487767|ref|YP_617328.1| F0F1 ATP synthase subunit alpha [Sphingopyxis alaskensis RB2256]
 gi|118573492|sp|Q1GQS7.1|ATPA_SPHAL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|98977844|gb|ABF53995.1| ATP synthase F1, alpha subunit [Sphingopyxis alaskensis RB2256]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 77/119 (64%)

Query: 1   MKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVAVIYCGV 60
           +KLELAQYRE+ AFAQFGSDLDA+TQ+LL RG RLT+LLKQ Q+ PM  EEQ A I+ G 
Sbjct: 390 IKLELAQYREMEAFAQFGSDLDASTQKLLGRGARLTQLLKQPQFQPMPFEEQTASIFAGT 449

Query: 61  RGHLDKLDPAKITTFEKEFLAHIKSSERGLLESIKKEGKITEDTDAKLKTVVTNFLANF 119
            G+LD +    ++ +E   LA+++S    +L +I+    + +DT   L   +  F   F
Sbjct: 450 NGYLDTVATTDVSRYEAAMLAYLRSDHPQVLAAIRDSKDLGDDTKKALVAALDAFAKIF 508


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.134    0.363 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,603,561,292
Number of Sequences: 23463169
Number of extensions: 56289434
Number of successful extensions: 176017
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5981
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 169883
Number of HSP's gapped (non-prelim): 6025
length of query: 121
length of database: 8,064,228,071
effective HSP length: 88
effective length of query: 33
effective length of database: 5,999,469,199
effective search space: 197982483567
effective search space used: 197982483567
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)