RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13778
(295 letters)
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen,
jelly- roll topology, structural protein; 1.36A
{Bacillus anthracis}
Length = 220
Score = 69.2 bits (169), Expect = 4e-14
Identities = 46/141 (32%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 58 LQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTL 117
+ GPTL P TLP GPT P GPT PT P GPT G T GPT
Sbjct: 1 MAFDPNLVGPTLPPIP----PFTLPTGPTGPTGPTGPTGPTGPTGPT---GDTGTTGPTG 53
Query: 118 PQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRK 177
P GPT P GPT G T GPT G P L L +
Sbjct: 54 PTGPTGPTGPTGATGLTGPTGPTGPSGLG---LPAGLYAFNSGGISLDLGINDPVPFNTV 110
Query: 178 GPTLPQGPTLPQGPTLPQDPT 198
G + T T
Sbjct: 111 GSQFGTAISQLDADTFVISET 131
Score = 66.2 bits (161), Expect = 5e-13
Identities = 48/129 (37%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 76 LQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLPQGPTLPQGPTLPQGPTL 135
+ GPTLP P TLP GPT GPT P GPT P GPT P G T GPT
Sbjct: 1 MAFDPNLVGPTLPPIPP----FTLPTGPT---GPTGPTGPTGPTGPTGPTGDTGTTGPTG 53
Query: 136 LQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRKGPTLPQGPTLPQGPTLPQ 195
GPT GPT G T GPT P G L G L +P Q
Sbjct: 54 PTGPTGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQ 113
Query: 196 DPTLLQDPT 204
T +
Sbjct: 114 FGTAISQLD 122
Score = 65.8 bits (160), Expect = 6e-13
Identities = 39/175 (22%), Positives = 50/175 (28%), Gaps = 19/175 (10%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
PT GPT P GPT GPT G T GPT P GPT PT G T GPT P
Sbjct: 19 TLPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGATGLTGPTGPTGP 78
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQ------------------GPTLL 154
G LP G + + + +
Sbjct: 79 SGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYKITV 138
Query: 155 QGPTLPQGPTLLQGPTLLQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
T + P T +L + + P+L++
Sbjct: 139 IANTATASVLGGLTIQVNGVP-VPGTGSSLISLGAPIVIQAITQITTTPSLVEVI 192
Score = 60.8 bits (147), Expect = 3e-11
Identities = 39/157 (24%), Positives = 43/157 (27%), Gaps = 7/157 (4%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
TL GPT P GPT GPT GPT G T P GPT PT P G G T P
Sbjct: 16 PPFTLPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGA---TGLTGP 72
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GPT P G LP G + + +
Sbjct: 73 TGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISE-- 130
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
T + P G
Sbjct: 131 --TGFYKITVIANTATASVLGGLTIQVNGVPVPGTGS 165
Score = 55.4 bits (133), Expect = 2e-09
Identities = 17/137 (12%), Positives = 29/137 (21%), Gaps = 1/137 (0%)
Query: 50 TLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGP 109
T GPT G LP G + + +
Sbjct: 70 TGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVIS 129
Query: 110 TLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGP 169
T + P G +L+ + + Q T
Sbjct: 130 ETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLV 189
Query: 170 TLLQGPRKGPTLPQGPT 186
++ G +L G +
Sbjct: 190 EVIVTG-LGLSLALGTS 205
Score = 55.0 bits (132), Expect = 4e-09
Identities = 22/149 (14%), Positives = 33/149 (22%), Gaps = 1/149 (0%)
Query: 50 TLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGP 109
T GPT G T P GPT G L G + + +
Sbjct: 58 TGPTGPTGATGLTGPTGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTA 117
Query: 110 TLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGP 169
T + P G +L +
Sbjct: 118 ISQLDADTFVISETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQ 177
Query: 170 TLLQGPRKGPTLPQGPTLPQGPTLPQDPT 198
+ Q P+L + G +L +
Sbjct: 178 AITQITT-TPSLVEVIVTGLGLSLALGTS 205
Score = 45.4 bits (107), Expect = 6e-06
Identities = 12/116 (10%), Positives = 26/116 (22%)
Query: 49 WTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQG 108
+ L T+ + + + G
Sbjct: 90 FNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATASVLG 149
Query: 109 PTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPT 164
Q +P T +L + + P+L++ G +L G +
Sbjct: 150 GLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTS 205
Score = 42.3 bits (99), Expect = 7e-05
Identities = 36/92 (39%), Positives = 36/92 (39%), Gaps = 17/92 (18%)
Query: 120 GPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRKGP 179
GPTLP P TL GPT GPT GPT P GPT G
Sbjct: 3 FDPNLVGPTLPPIP----PFTLPTGPTGPTGPTGPTGPTGPTGPT-------------GD 45
Query: 180 TLPQGPTLPQGPTLPQDPTLLQDPTLLQGPRY 211
T GPT P GPT P PT T GP
Sbjct: 46 TGTTGPTGPTGPTGPTGPTGATGLTGPTGPTG 77
Score = 37.3 bits (86), Expect = 0.003
Identities = 8/107 (7%), Positives = 17/107 (15%)
Query: 50 TLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGP 109
+ T + P G
Sbjct: 106 PFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATASVLGGLTIQVNGVPVPGTGS 165
Query: 110 TLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQG 156
+L + Q T P ++ L +++
Sbjct: 166 SLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEK 212
Score = 33.0 bits (75), Expect = 0.066
Identities = 10/71 (14%), Positives = 20/71 (28%)
Query: 46 QIYWTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTL 105
+I + G Q + T +L + + P+L +
Sbjct: 135 KITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVT 194
Query: 106 LQGPTLPQGPT 116
G +L G +
Sbjct: 195 GLGLSLALGTS 205
Score = 33.0 bits (75), Expect = 0.074
Identities = 8/77 (10%), Positives = 15/77 (19%)
Query: 47 IYWTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLL 106
Y + T + P G +L + Q T P ++
Sbjct: 133 FYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVI 192
Query: 107 QGPTLPQGPTLPQGPTL 123
+
Sbjct: 193 VTGLGLSLALGTSASII 209
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular,
packing structure; 5.16A {Rattus norvegicus} SCOP:
i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A
Length = 1054
Score = 54.7 bits (132), Expect = 1e-08
Identities = 40/158 (25%), Positives = 50/158 (31%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP +QGP P G +G GP+ GP +G + G +GP
Sbjct: 289 PGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGE 348
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G P GP G G L G L G GP GP P G GP
Sbjct: 349 RGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGP 408
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G G P+G + G
Sbjct: 409 PGA-RGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAV 445
Score = 54.7 bits (132), Expect = 2e-08
Identities = 38/158 (24%), Positives = 47/158 (29%), Gaps = 1/158 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+QGP G +G GP+ L GP +G +G P+GP +G
Sbjct: 294 VQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPG 353
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP G G G L G GP GP G GP G
Sbjct: 354 PAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARG 413
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G G P+G G + G
Sbjct: 414 QAGV-MGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGK 450
Score = 52.8 bits (127), Expect = 6e-08
Identities = 42/143 (29%), Positives = 50/143 (34%), Gaps = 1/143 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G +G G +G GP P G G P G GP P
Sbjct: 853 EGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGP 912
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P G P GP P+G G +G +G + LQGP P G QGP+
Sbjct: 913 IGPVGPAGARGPAGPQGPRGDKGETGEEGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGA 972
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQ 195
GP GP P G G
Sbjct: 973 SGP-AGPRGPPGSAGSPGKDGLN 994
Score = 52.8 bits (127), Expect = 7e-08
Identities = 38/158 (24%), Positives = 44/158 (27%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP+ L GP +G +G G P+GP +G P G G
Sbjct: 313 PGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL 372
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G GP GP G GP G G GP G
Sbjct: 373 PGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGK 432
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G P G P G P G R
Sbjct: 433 AGE-RGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGER 469
Score = 52.8 bits (127), Expect = 7e-08
Identities = 36/140 (25%), Positives = 40/140 (28%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G G +G G +G P GP G GP L G
Sbjct: 91 RGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGR 150
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G P G G GP GPT G G GP +G QG
Sbjct: 151 PGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGE 210
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GP GP GP G
Sbjct: 211 PGP-PGPAGAAGPAGNPGAD 229
Score = 52.4 bits (126), Expect = 7e-08
Identities = 41/141 (29%), Positives = 48/141 (34%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G +G GP G G P GP G P P GP G
Sbjct: 864 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAGARG 923
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP P+G G +G +G + LQGP G QGP+ GP +GP
Sbjct: 924 PAGPQGPRGDKGETGEEGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG 983
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
G G G P GP
Sbjct: 984 SAGS-PGKDGLNGLPGPIGPP 1003
Score = 52.4 bits (126), Expect = 7e-08
Identities = 45/161 (27%), Positives = 55/161 (34%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L GP G G G G +G T P GP GP G +
Sbjct: 843 LAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSG 902
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G T P GP P GP +GP QGP +G T +G ++G G GP
Sbjct: 903 DRGETGPAGPIGPVGPAGARGPAGPQGPRGDKGETGEEGDRGIKGHRGFSGLQGPPGPPG 962
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G + G + P GP P G L GP
Sbjct: 963 SPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPP 1003
Score = 52.4 bits (126), Expect = 8e-08
Identities = 36/141 (25%), Positives = 38/141 (26%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G +G P GP G G GP G P G G
Sbjct: 108 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGAAG 167
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP P GPT P G G GP +G QG GP P G G
Sbjct: 168 AAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPG 227
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
G G G G
Sbjct: 228 ADGQ-PGAKGANGAPGIAGAP 247
Score = 52.0 bits (125), Expect = 9e-08
Identities = 46/164 (28%), Positives = 58/164 (35%), Gaps = 5/164 (3%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L GP+ G P G + +GP GP GP G G G
Sbjct: 813 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKG 872
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G T P GP G GP G + +G T GP GP +GP QGP
Sbjct: 873 DRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAGARGPAGPQGPRG 932
Query: 172 LQGPR-----KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G +G +G + QGP P Q P+ GP
Sbjct: 933 DKGETGEEGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPA 976
Score = 52.0 bits (125), Expect = 1e-07
Identities = 34/140 (24%), Positives = 40/140 (28%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G P GP +G G +G G + P GP G
Sbjct: 73 AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGE 132
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G GP G G G G GP GPT P G G
Sbjct: 133 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGE 192
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GP +G +GP +G
Sbjct: 193 AGP-EGARGSEGPQGVRGEP 211
Score = 52.0 bits (125), Expect = 1e-07
Identities = 37/143 (25%), Positives = 42/143 (29%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP +G G ++G G +G P GP G GP
Sbjct: 84 PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRG 143
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G P G G GP GPT G G GP +G
Sbjct: 144 LPGERGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEG 203
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
QG R GP P G P G
Sbjct: 204 PQGVRGEPGPPGPAGAAGPAGNP 226
Score = 51.6 bits (124), Expect = 1e-07
Identities = 41/159 (25%), Positives = 50/159 (31%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G P GP +G + G P+G G + P G G
Sbjct: 393 PPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 452
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G P GP P G QGP G L GP G G G GP+
Sbjct: 453 EAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG 512
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G R G +G P GP P+ +G
Sbjct: 513 ARGER-GFPGERGVEGPPGPAGPRGANGAPGNDGAKGDA 550
Score = 51.6 bits (124), Expect = 1e-07
Identities = 34/140 (24%), Positives = 37/140 (26%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G G +G GP G G GP L G G
Sbjct: 103 KGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGN 162
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G GP P GPT P G G GP +G QG GP G
Sbjct: 163 DGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGP 222
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G G G G
Sbjct: 223 AGN-PGADGQPGAKGANGAP 241
Score = 51.6 bits (124), Expect = 2e-07
Identities = 44/159 (27%), Positives = 51/159 (32%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L GP +G P+G G ++G T P GP P G + P GP G
Sbjct: 576 LPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARG 635
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP P G P G G G +G GP P GP G
Sbjct: 636 APGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVG 695
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP KG GP G P+ GP
Sbjct: 696 APGP-KGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPP 733
Score = 51.3 bits (123), Expect = 2e-07
Identities = 40/158 (25%), Positives = 49/158 (31%), Gaps = 1/158 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G + GP P G GP +G G G + T G G T
Sbjct: 333 FPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTG 392
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP G P GP +G + G +G G +G P G G
Sbjct: 393 PPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDG 452
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G +GP P GP +G P Q GP
Sbjct: 453 EAGA-QGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 489
Score = 51.3 bits (123), Expect = 2e-07
Identities = 35/147 (23%), Positives = 42/147 (28%), Gaps = 1/147 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G GP +G G ++G G +G P G G
Sbjct: 78 RPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPG 137
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP G G P G G GP GPT G G GP
Sbjct: 138 QMGPRGLPGERGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEG 197
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPT 198
+G +GP +G P GP P
Sbjct: 198 ARGS-EGPQGVRGEPGPPGPAGAAGPA 223
Score = 51.3 bits (123), Expect = 2e-07
Identities = 38/159 (23%), Positives = 46/159 (28%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G G + GP G GP P+G G +G T
Sbjct: 321 PPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTG 380
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G P G T P GP G GP +G + G +G G +G
Sbjct: 381 SPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 440
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP G QGP P P + G
Sbjct: 441 PPGAV-GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSP 478
Score = 50.9 bits (122), Expect = 2e-07
Identities = 40/159 (25%), Positives = 49/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G + GP P GP G G G P GP + G ++G
Sbjct: 48 EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRG 107
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +G P GP G G GP L G G P G G
Sbjct: 108 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGAAG 167
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP GPT P GP G + + +GP+
Sbjct: 168 AAGP-PGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQ 205
Score = 50.9 bits (122), Expect = 3e-07
Identities = 40/142 (28%), Positives = 47/142 (33%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
QG LQG +G L GP +G P+G G ++ T P GP G
Sbjct: 559 QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGD 618
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G P GP P G G GP G G G G +G
Sbjct: 619 KGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP 678
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
GP GP P G GP
Sbjct: 679 PGPAGPAGPPGPIGNVGAPGPK 700
Score = 50.5 bits (121), Expect = 3e-07
Identities = 46/143 (32%), Positives = 52/143 (36%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G P GP G GP P GP P G P P+G G
Sbjct: 882 PPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAGARGPAGPQGPRGDKGETGEEG 941
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G +G + QGP P G QGP+ GP +GP G G L GP
Sbjct: 942 DRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIG 1001
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
GPR G P GP P GP
Sbjct: 1002 PPGPRGRTGDAGPAGPPGPPGPP 1024
Score = 50.5 bits (121), Expect = 3e-07
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G +G GP+ G G + +GP P GP L P G G
Sbjct: 801 LPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEG 860
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G +G T P GP G GP G + +G T P GP GP
Sbjct: 861 SPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAG 920
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+GP GP P+G G + + + LQGP
Sbjct: 921 ARGPA-GPQGPRGDKGETGEEGDRGIKGHRGFSGLQGPP 958
Score = 50.5 bits (121), Expect = 3e-07
Identities = 39/145 (26%), Positives = 45/145 (31%), Gaps = 1/145 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP P G GP +G G +G + + QGP G
Sbjct: 907 TGPAGPIGPVGPAGARGPAGPQGPRGDKGETGEEGDRGIKGHRGFSGLQGPPGPPGSPGE 966
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
QGP+ GP P+GP G G L GP GP G P GP GP
Sbjct: 967 QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGP 1026
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDP 197
GP D
Sbjct: 1027 PGP-PSGGYDLSFLPQPPQQKAHDK 1050
Score = 50.5 bits (121), Expect = 3e-07
Identities = 40/158 (25%), Positives = 43/158 (27%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G L G G GP GP P G GP G GP
Sbjct: 367 PGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGA 426
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G GP GP G QGP GP +G P G QG
Sbjct: 427 AGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGP 486
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G G G P+ + G R
Sbjct: 487 AGP-PGEAGKPGEQGVPGDLGAPGPSGARGERGFPGER 523
Score = 50.5 bits (121), Expect = 3e-07
Identities = 45/160 (28%), Positives = 54/160 (33%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP +G GP G PQG +G L +G L GP+
Sbjct: 760 VGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGE 819
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G P G + +GP P GP L GP G G G G +G T
Sbjct: 820 PGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGP 879
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G GP P G + + T P GP
Sbjct: 880 AGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPA 919
Score = 50.5 bits (121), Expect = 4e-07
Identities = 41/161 (25%), Positives = 50/161 (31%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G +G G QG LQG +G GP + P+G G
Sbjct: 540 APGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDG 599
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G T P GP P G +G GP G G GP P G G
Sbjct: 600 VRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADG 659
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G + G +G P GP P P GP+
Sbjct: 660 QPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPK 700
Score = 50.5 bits (121), Expect = 4e-07
Identities = 43/139 (30%), Positives = 50/139 (35%), Gaps = 1/139 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP G GP G + +G T P GP P GP + P PQGP +G T
Sbjct: 880 AGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAGARGPAGPQGPRGDKGETGE 939
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G +G G P GP G G + GP G G L G
Sbjct: 940 EGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGP 999
Query: 173 QGPRKGPTLPQGPTLPQGP 191
GP GP G P GP
Sbjct: 1000 IGP-PGPRGRTGDAGPAGP 1017
Score = 50.5 bits (121), Expect = 4e-07
Identities = 41/158 (25%), Positives = 48/158 (30%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G T G GP GP +G GP G Q +G L G
Sbjct: 748 RGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 807
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G GP+ G P G + +GP GP L GP G G G
Sbjct: 808 RGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGS 867
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G KG GP P G P G R
Sbjct: 868 PGA-KGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDR 904
Score = 50.1 bits (120), Expect = 4e-07
Identities = 35/140 (25%), Positives = 43/140 (30%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G GP +G G GPT P GP G + P+G +GP
Sbjct: 148 RGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGV 207
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G P GP GP G G G + G G P GP G
Sbjct: 208 RGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPEGPSGAPGP 267
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
+G G G G
Sbjct: 268 KGN-SGEPGAPGNKGDTGAK 286
Score = 50.1 bits (120), Expect = 4e-07
Identities = 39/158 (24%), Positives = 48/158 (30%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G GP P+GP G G G +GP Q G L G
Sbjct: 46 PGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGH 105
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G + G GP P+G G G +G +G GP +G
Sbjct: 106 RGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGA 165
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP P GPT P G P +G
Sbjct: 166 AGA-AGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSE 202
Score = 50.1 bits (120), Expect = 4e-07
Identities = 38/159 (23%), Positives = 44/159 (27%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G + P GP GP G G G P +G G
Sbjct: 42 PPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPG 101
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G G +G P GP G G GP L G G G
Sbjct: 102 MKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARG 161
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G P GPT P GP + +G R
Sbjct: 162 NDGA-AGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGAR 199
Score = 50.1 bits (120), Expect = 4e-07
Identities = 46/159 (28%), Positives = 52/159 (32%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G L GP P GP G GP+ P GPT +G + P GP GP
Sbjct: 597 KDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPG 656
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +G G GP GP GP G +G GP G
Sbjct: 657 ADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPG 716
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP P G P GP P + P GP
Sbjct: 717 AAGR-VGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPA 754
Score = 50.1 bits (120), Expect = 4e-07
Identities = 42/159 (26%), Positives = 47/159 (29%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G G +G GP P GP P G P +G G T
Sbjct: 654 PPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATG 713
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP P G P GP G +GP GP G P GP G
Sbjct: 714 FPGAAGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKG 773
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP G PQG + L +G
Sbjct: 774 APGA-DGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFP 811
Score = 50.1 bits (120), Expect = 5e-07
Identities = 43/159 (27%), Positives = 48/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G GP GP G GP P G G P G G
Sbjct: 378 LTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKAGERG 437
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP GP G QGP GP +G G QG P GP G
Sbjct: 438 VPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPG 497
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
QG G GP+ +G ++ P GPR
Sbjct: 498 EQGV-PGDLGAPGPSGARGERGFPGERGVEGPPGPAGPR 535
Score = 50.1 bits (120), Expect = 5e-07
Identities = 42/140 (30%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G GP+ GP GP +G P+G T P G P P GP +G
Sbjct: 718 AGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGA 777
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP G PQG +G L G +G L GP+ G P G + +GP
Sbjct: 778 DGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGP 837
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GP G P G + +G
Sbjct: 838 MGP-PGLAGPPGESGREGAP 856
Score = 50.1 bits (120), Expect = 5e-07
Identities = 42/157 (26%), Positives = 54/157 (34%), Gaps = 1/157 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G P GP+ GP GP +G P+G T GP GP
Sbjct: 712 TGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGE 771
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G GP G PQG +G L G +G L GP+ G G +
Sbjct: 772 KGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGE 831
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
+GP GP P G P G + + + G
Sbjct: 832 RGP-PGPMGPPGLAGPPGESGREGAPGAEGSPGRDGS 867
Score = 49.7 bits (119), Expect = 5e-07
Identities = 37/142 (26%), Positives = 42/142 (29%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP L G G G G GP P GPT G GP
Sbjct: 139 MGPRGLPGERGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGA 198
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G PQG GP P G G G +G G G +GP+
Sbjct: 199 RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP 258
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
+GP GP G G
Sbjct: 259 EGPSGAPGPKGNSGEPGAPGNK 280
Score = 49.7 bits (119), Expect = 5e-07
Identities = 38/141 (26%), Positives = 40/141 (28%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G G L G L G GP GP GP G
Sbjct: 354 PAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARG 413
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP G G + GP GP G QGP P GP +G
Sbjct: 414 QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQG 473
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
G G GP P G
Sbjct: 474 PAGS-PGFQGLPGPAGPPGEA 493
Score = 49.7 bits (119), Expect = 6e-07
Identities = 44/158 (27%), Positives = 50/158 (31%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G GP P G G GP P G P G G +G P
Sbjct: 619 KGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP 678
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P GP P G GP +G G T G GP P G GP
Sbjct: 679 PGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP 738
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G P+G T P G P P +G
Sbjct: 739 AGK-EGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAP 775
Score = 49.7 bits (119), Expect = 7e-07
Identities = 38/140 (27%), Positives = 39/140 (27%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G G L G GP GP P G P P G G
Sbjct: 361 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGF 420
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP G G GP GP G QGP GP +G G
Sbjct: 421 PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 480
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
QG GP P G G
Sbjct: 481 QGL-PGPAGPPGEAGKPGEQ 499
Score = 49.3 bits (118), Expect = 7e-07
Identities = 37/160 (23%), Positives = 45/160 (28%), Gaps = 2/160 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G G +G G QG QG +G L P +G +G
Sbjct: 534 PRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADG 593
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +G T P GP P G +G GP G G GP G
Sbjct: 594 APGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAG 653
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G G G +G P P P G
Sbjct: 654 PPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGN 693
Score = 49.3 bits (118), Expect = 8e-07
Identities = 43/159 (27%), Positives = 47/159 (29%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G G G +G P GP P GP GP +G
Sbjct: 648 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAG 707
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P G T G GP P G GP G +GP GP G GP
Sbjct: 708 PPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPG 767
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G KG GP G PQ + L G R
Sbjct: 768 PAGE-KGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQR 805
Score = 49.3 bits (118), Expect = 8e-07
Identities = 40/147 (27%), Positives = 46/147 (31%), Gaps = 1/147 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G GP P GP G GP +G P G T GP G
Sbjct: 672 AKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAG 731
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP P G +GP GP G GP G G P G GP
Sbjct: 732 PPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQG 791
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPT 198
+ G R G G +G P+
Sbjct: 792 IAGQR-GVVGLPGQRGERGFPGLPGPS 817
Score = 49.3 bits (118), Expect = 8e-07
Identities = 39/141 (27%), Positives = 48/141 (34%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP GP +G +G T G GP P GP + GP G
Sbjct: 729 NAGPPGPPGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPG 788
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
PQG +G G +G L GP+ G G + +GP P GP L GP
Sbjct: 789 PQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPG 848
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
G G +G G
Sbjct: 849 ESGRE-GAPGAEGSPGRDGSP 868
Score = 49.3 bits (118), Expect = 9e-07
Identities = 39/147 (26%), Positives = 46/147 (31%), Gaps = 1/147 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G GP P GP +G GP G PQG + G +G
Sbjct: 753 PAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 812
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP+ G P G + +GP GP L GP G G G G
Sbjct: 813 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKG 872
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPT 198
+G GP P G G P P
Sbjct: 873 DRGE-TGPAGPPGAPGAPGAPGPVGPA 898
Score = 49.3 bits (118), Expect = 9e-07
Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ G + G +G G G QGP+ G P P G G +
Sbjct: 792 IAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESG 851
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G +G G +G GP G G GP G GP
Sbjct: 852 REGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAG 911
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP GP +GP PQGP + T + ++G R
Sbjct: 912 PIGP-VGPAGARGPAGPQGPRGDKGETGEEGDRGIKGHR 949
Score = 49.3 bits (118), Expect = 9e-07
Identities = 42/144 (29%), Positives = 52/144 (36%), Gaps = 1/144 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G GP G G GP+ GP P GP + P+G T G
Sbjct: 699 PKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGRPG 758
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP P GP +G GP G QG +G L G +G L GP+
Sbjct: 759 EVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSG 818
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQ 195
G +GP+ G P GP P
Sbjct: 819 EPGK-QGPSGASGERGPPGPMGPP 841
Score = 49.0 bits (117), Expect = 1e-06
Identities = 41/160 (25%), Positives = 45/160 (28%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G GP P G G G G +G P P GP G
Sbjct: 637 PGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGA 696
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP +G P G T G GP G GP G +GP GP
Sbjct: 697 PGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGSKGPRGETGPAGR 756
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP P G G P P + G R
Sbjct: 757 PGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQR 796
Score = 49.0 bits (117), Expect = 1e-06
Identities = 41/160 (25%), Positives = 53/160 (33%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+GP+ +GP+ GP G G G GP +Q P P G +G
Sbjct: 253 RGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGE 312
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP+ GP +G +G G +GP +G GP G G L
Sbjct: 313 PGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL 372
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G + G GP GP P P G R
Sbjct: 373 PGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGAR 412
Score = 49.0 bits (117), Expect = 1e-06
Identities = 38/143 (26%), Positives = 40/143 (27%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G L G GP GP G GP P G GP G
Sbjct: 372 LPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPG 431
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP GP G QGP GP +G G QG GP
Sbjct: 432 KAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPG 491
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G +G G P G
Sbjct: 492 EAGKPGEQGVPGDLGAPGPSGAR 514
Score = 49.0 bits (117), Expect = 1e-06
Identities = 37/145 (25%), Positives = 44/145 (30%), Gaps = 2/145 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G G GP +QGP P G +G P+ GP +G
Sbjct: 271 SGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGS 330
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G G P+GP +G GP G G L G G GP
Sbjct: 331 RGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGK 390
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQ 195
GP G GP P G
Sbjct: 391 TGPPGPAGEDGRPGPAGPPGARGQA 415
Score = 49.0 bits (117), Expect = 1e-06
Identities = 40/161 (24%), Positives = 51/161 (31%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G GP +G QG GP P G P G +G G
Sbjct: 186 AVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAG 245
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +GP+ P+GP+ GP G G G GP QGP G
Sbjct: 246 APGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEG 305
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G R GP+ GP +G + +GP
Sbjct: 306 KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPA 346
Score = 49.0 bits (117), Expect = 1e-06
Identities = 37/142 (26%), Positives = 46/142 (32%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GPT G G GP +G PQG GP P G G
Sbjct: 175 TGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGA 234
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G G G +GP+ +GP+ GP G G G GP +
Sbjct: 235 KGANGAPGIAGAPGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGV 294
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
QGP G +G GP+
Sbjct: 295 QGPPGPAGEEGKRGARGEPGPS 316
Score = 48.6 bits (116), Expect = 1e-06
Identities = 42/161 (26%), Positives = 49/161 (30%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G G G GP QGP P G + GP+ L GP
Sbjct: 264 APGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPG 323
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G +G G P+GP +G GP G G G L G
Sbjct: 324 ERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG 383
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP GP P G GP P GP+
Sbjct: 384 SPGPDGKTGPPGPAGEDGRPGPAGPPGARGQAGVMGFPGPK 424
Score = 48.6 bits (116), Expect = 1e-06
Identities = 37/143 (25%), Positives = 47/143 (32%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G P+G +G GP +G G PT P GP G
Sbjct: 129 SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVG 188
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G P+G +GP +G GP GP G G G + G
Sbjct: 189 AKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPG 248
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G R GP P G P+G +
Sbjct: 249 FPGARGPSGPEGPSGAPGPKGNS 271
Score = 48.2 bits (115), Expect = 2e-06
Identities = 41/140 (29%), Positives = 47/140 (33%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+ GP P GP L GP GP QGP G P P+GP G
Sbjct: 10 STGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGD 69
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G +GP PQG L G L G +G + L G GP +G
Sbjct: 70 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS 129
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G G GP G
Sbjct: 130 PGE-NGAPGQMGPRGLPGER 148
Score = 48.2 bits (115), Expect = 2e-06
Identities = 38/158 (24%), Positives = 49/158 (31%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G QG G G +G +G P GP + G +G
Sbjct: 493 AGKPGEQGVPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGAPGNDGAKGDAGA 552
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G QG QG +G L GP +G +G G +G T GP
Sbjct: 553 PGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGP 612
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G GP+ P GPT + + GP
Sbjct: 613 AGA-PGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPA 649
Score = 48.2 bits (115), Expect = 2e-06
Identities = 43/159 (27%), Positives = 48/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G +G P GP G G GP P G G G
Sbjct: 612 PAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAG 671
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G P GP P GP P G GP +G G T G GP G
Sbjct: 672 AKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAG 731
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP GP +G P+G T P P GP
Sbjct: 732 PPGP-PGPAGKEGSKGPRGETGPAGRPGEVGPPGPPGPA 769
Score = 47.8 bits (114), Expect = 2e-06
Identities = 38/140 (27%), Positives = 46/140 (32%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G GP P+G G +G G QG LQ +G L GP
Sbjct: 523 RGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGD 582
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G P+G G +G T GP G +G GP P G G
Sbjct: 583 RGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGE 642
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GP GP GP G
Sbjct: 643 PGP-PGPAGFAGPPGADGQP 661
Score = 47.8 bits (114), Expect = 2e-06
Identities = 37/140 (26%), Positives = 47/140 (33%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G +G P GP +G G +G G Q QG +G
Sbjct: 517 RGFPGERGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGL 576
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP +G P+G G ++G T GP G +G P GP G
Sbjct: 577 PGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGA 636
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G R G P GP GP
Sbjct: 637 PGDR-GEPGPPGPAGFAGPP 655
Score = 47.8 bits (114), Expect = 3e-06
Identities = 42/161 (26%), Positives = 51/161 (31%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ GP GP GP GP QGP G GP + P P G G
Sbjct: 15 VPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAG 74
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +GP PQG G L G +G + L G GP P+G G
Sbjct: 75 KPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENG 134
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G +G GP + GP
Sbjct: 135 APGQMGPRGLPGERGRPGAPGPAGARGNDGAAGAAGPPGPT 175
Score = 47.8 bits (114), Expect = 3e-06
Identities = 37/160 (23%), Positives = 44/160 (27%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G +G P G G G P GP P G Q P G L GP P
Sbjct: 430 PGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGP 489
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G G GP+ +G G ++GP GP G G
Sbjct: 490 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGAPGNDGAKGD 549
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G G G + GP+
Sbjct: 550 AGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPK 589
Score = 47.4 bits (113), Expect = 3e-06
Identities = 39/158 (24%), Positives = 51/158 (32%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G G G +GP+ +GP+ GP G G GP
Sbjct: 235 KGANGAPGIAGAPGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGV 294
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
QGP P G +G GP+ L GP +G +G G P+GP +G
Sbjct: 295 QGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGP 354
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP KG G G + T G
Sbjct: 355 AGP-KGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKT 391
Score = 47.4 bits (113), Expect = 3e-06
Identities = 38/149 (25%), Positives = 46/149 (30%), Gaps = 2/149 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ G GP+ +G G ++GP P GP G G G
Sbjct: 501 VPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQG 560
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G G P+G GP G G L GP P GP G
Sbjct: 561 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKG 620
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPT 198
GP GPT +G +G P P
Sbjct: 621 EAGPSGPAGPTGARGAPGDRGEPGPPGPA 649
Score = 47.4 bits (113), Expect = 3e-06
Identities = 38/141 (26%), Positives = 44/141 (31%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G ++GP P GP G G G G G G
Sbjct: 519 FPGERGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPG 578
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P+G GP G G L GP GP G GP+ P GPT +G
Sbjct: 579 PKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPG 638
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
+G GP P G P G
Sbjct: 639 DRGE-PGPPGPAGFAGPPGAD 658
Score = 47.4 bits (113), Expect = 3e-06
Identities = 33/143 (23%), Positives = 41/143 (28%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
++GP GP G G G G G + G +G
Sbjct: 525 VEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRG 584
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP G G GP GP G GP+ GPT +G +G
Sbjct: 585 DAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPG 644
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
GP GP G +G
Sbjct: 645 PPGPAGFAGPPGADGQPGAKGEP 667
Score = 47.0 bits (112), Expect = 4e-06
Identities = 36/143 (25%), Positives = 45/143 (31%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G GP +G QG GP P G G +G
Sbjct: 180 PPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANG 239
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G +GP+ P+GP+ GP G G G GP +QGP
Sbjct: 240 APGIAGAPGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPG 299
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G +G GP+ GP
Sbjct: 300 PAGEEGKRGARGEPGPSGLPGPP 322
Score = 47.0 bits (112), Expect = 5e-06
Identities = 38/142 (26%), Positives = 46/142 (32%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GPT P G G GP +G PQG P P G G
Sbjct: 169 AGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGA 228
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G G G +GP+ +GP+ GP G G G
Sbjct: 229 DGQPGAKGANGAPGIAGAPGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGE 288
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
GP +GP P G +G
Sbjct: 289 PGPAGVQGPPGPAGEEGKRGAR 310
Score = 47.0 bits (112), Expect = 5e-06
Identities = 41/159 (25%), Positives = 49/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP +G P G QG GP G QG P G +G
Sbjct: 462 PAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPG 521
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G P GP P+G G +G G QG LQG +G L GP
Sbjct: 522 ERGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 581
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G GP G G P P G +
Sbjct: 582 DRGD-AGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDK 619
Score = 46.6 bits (111), Expect = 6e-06
Identities = 34/159 (21%), Positives = 42/159 (26%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G G GP G QGP G L P P G G
Sbjct: 441 PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQG 500
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP+ +G G ++GP GP G G G G
Sbjct: 501 VPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQG 560
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G +G GP + + G
Sbjct: 561 APGL-QGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKD 598
Score = 46.6 bits (111), Expect = 7e-06
Identities = 39/161 (24%), Positives = 49/161 (30%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G +GP+ P+GP+ GP G G G P QGP G
Sbjct: 246 APGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEG 305
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G GP+ GP +G +G G +GP +G P GP G
Sbjct: 306 KRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAG 365
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G G GP P GP
Sbjct: 366 RPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGEDGRPGPA 406
Score = 45.1 bits (107), Expect = 2e-05
Identities = 39/157 (24%), Positives = 51/157 (32%), Gaps = 1/157 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP G QG G G +G +G P P+G G
Sbjct: 487 AGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGAPGNDGA 546
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G G QG QG +G L GP +G +G G ++G T
Sbjct: 547 KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGP 606
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
GP GP G GP+ P PT + +G
Sbjct: 607 IGP-PGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGE 642
Score = 44.7 bits (106), Expect = 2e-05
Identities = 30/127 (23%), Positives = 37/127 (29%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
QGP +G T +G ++G G P GP G + P GP G
Sbjct: 927 PQGPRGDKGETGEEGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAG 986
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G P GP P+G T GP GP GP
Sbjct: 987 SPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSGGYDLSFLPQPPQQK 1046
Query: 172 LQGPRKG 178
+
Sbjct: 1047 AHDKGRY 1053
Score = 44.7 bits (106), Expect = 2e-05
Identities = 39/157 (24%), Positives = 52/157 (33%), Gaps = 1/157 (0%)
Query: 54 GPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQ 113
G +G G G +GP+ P+GP+ GP G G
Sbjct: 230 GQPGAKGANGAPGIAGAPGFPGARGPSGPEGPSGAPGPKGNSGEPGAPGNKGDTGAKGEP 289
Query: 114 GPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQ 173
GP QGP P G +G GP+ L GP +G +G G +GP +
Sbjct: 290 GPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGFPGADGVAGPKGPAGER 349
Query: 174 GPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP P+G G + T G
Sbjct: 350 GS-PGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSP 385
Score = 44.3 bits (105), Expect = 4e-05
Identities = 38/159 (23%), Positives = 48/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP +G G GPT GP G +G + +GP ++G
Sbjct: 153 APGPAGARGNDGAAGAAGPPGPTGPTGPPGFPGAVGAKGEAGPEGARGSEGPQGVRGEPG 212
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP GP G G G + G G GP P G +G +
Sbjct: 213 PPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPEGPSGAPGPKGNSG 272
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G G GP Q P +G R
Sbjct: 273 EPGA-PGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGAR 310
Score = 43.6 bits (103), Expect = 5e-05
Identities = 33/158 (20%), Positives = 44/158 (27%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+ + GP+ +G P G PQG G + GP P
Sbjct: 1 EMSYGYDEKSTGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGP 60
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP G G G GP +G G ++G G +G
Sbjct: 61 PGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 120
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP KG G G P+ + GP
Sbjct: 121 AGP-KGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 157
Score = 33.9 bits (78), Expect = 0.056
Identities = 30/97 (30%), Positives = 34/97 (35%)
Query: 49 WTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQG 108
++ LQGP G QGP+ GP +GP G G L P P GP G
Sbjct: 951 FSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTG 1010
Query: 109 PTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGP 145
P GP P GP P GP Q
Sbjct: 1011 DAGPAGPPGPPGPPGPPGPPSGGYDLSFLPQPPQQKA 1047
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular,
packing structure; 5.16A {Rattus norvegicus} SCOP:
i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B
Length = 1026
Score = 53.6 bits (129), Expect = 3e-08
Identities = 38/160 (23%), Positives = 47/160 (29%), Gaps = 2/160 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G G GP G +G G P GP G
Sbjct: 833 NPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGTPGNAGPPGAVGPVGPVGEPGKLG 892
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G P G P G P+GP+ QG G +G ++G G L G
Sbjct: 893 NRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDDGEPGDKGDKGIKGDRGHNGLQGLPGLAG 952
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G + G P GP P GP+ P G
Sbjct: 953 HHGDQGAPGAVGPAGPRGPAGPSGPAGKIGRIGAVGPAGA 992
Score = 52.8 bits (127), Expect = 6e-08
Identities = 38/144 (26%), Positives = 44/144 (30%), Gaps = 1/144 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G G P G G GP P G P G P GP GP
Sbjct: 137 LPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAG 196
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP G GP P G G +G L G G P+G G
Sbjct: 197 PAGPRGEVGLPGLSGPVGPPGNAGPNGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAG 256
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQ 195
G +G GP +G + +
Sbjct: 257 ATGA-RGLVGEPGPAGSKGESGNK 279
Score = 52.8 bits (127), Expect = 7e-08
Identities = 41/158 (25%), Positives = 49/158 (31%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G GP G +G G P G P GP +G G P
Sbjct: 846 DGNPGNDGPPGRDGQPGHKGERGTPGNAGPPGAVGPVGPVGEPGKLGNRGEPGPAGAVGP 905
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G P+GP+ PQG G +G ++G G L G G G
Sbjct: 906 AGAVGPRGPSGPQGIRGDDGEPGDKGDKGIKGDRGHNGLQGLPGLAGHHGDQGAPGAVGP 965
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GPR GP P GP G P QG +
Sbjct: 966 AGPR-GPAGPSGPAGKIGRIGAVGPAGAAGIRGSQGSQ 1002
Score = 52.4 bits (126), Expect = 8e-08
Identities = 37/140 (26%), Positives = 44/140 (31%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G L G +G L G T G +G G +G +G
Sbjct: 87 PGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGTPGQKGARGLPGERGRVGA 146
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP +G GP P GP GP G +G G P GP +G L
Sbjct: 147 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGL 206
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G GP P G P G
Sbjct: 207 PGL-SGPVGPPGNAGPNGLP 225
Score = 52.4 bits (126), Expect = 8e-08
Identities = 35/159 (22%), Positives = 41/159 (25%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G G G + GP +G G + G L G
Sbjct: 53 PPGPPGKAGEDGHPGKPGRPGERGVPGPQGARGFPGTPGLPGFKGIRGHNGLDGLTGQPG 112
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G G +G L G G G G P GP G
Sbjct: 113 APGVKGEPGAPGENGTPGQKGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAG 172
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G P+G P G P P + L G
Sbjct: 173 PPGF-PGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLS 210
Score = 52.0 bits (125), Expect = 9e-08
Identities = 34/140 (24%), Positives = 43/140 (30%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G QG G L G ++G G T G ++ G G
Sbjct: 75 RGVPGPQGARGFPGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGTPGQKGA 134
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G +G GP +G GP GP GP G P+G G
Sbjct: 135 RGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGP 194
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GP GP G GP
Sbjct: 195 AGP-AGPRGEVGLPGLSGPV 213
Score = 52.0 bits (125), Expect = 1e-07
Identities = 36/140 (25%), Positives = 40/140 (28%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G L G G G G P GP P G GP GP
Sbjct: 132 KGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGN 191
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P GP G GP G G +G L G G +G
Sbjct: 192 PGPAGPAGPRGEVGLPGLSGPVGPPGNAGPNGLPGAKGAAGLPGVAGAPGLPGPRGIPGP 251
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G G T +G GP
Sbjct: 252 VGA-AGATGARGLVGEPGPA 270
Score = 52.0 bits (125), Expect = 1e-07
Identities = 49/160 (30%), Positives = 57/160 (35%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
QGP QGP GP G GP GPT G T P GP+ L GP P
Sbjct: 669 QGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAGPTGMTGFPGAAGRTGPPGPSGLTGPPGP 728
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G P+G P G + G T G +GPT G P GP QG
Sbjct: 729 PGAAGKEGIRGPRGDQGPVGRSGETGATGPTGFVGEKGPTGEPGSAGPPGPPGPQGLLGA 788
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G +G G P + P +GP
Sbjct: 789 PGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPP 828
Score = 52.0 bits (125), Expect = 1e-07
Identities = 42/158 (26%), Positives = 49/158 (31%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GPT G G T GP+ GP P G + P+G G +
Sbjct: 693 AGPRGDAGPTGMTGFPGAAGRTGPPGPSGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGE 752
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G T P G +GPT G GP QG G L G +G + G
Sbjct: 753 TGATGPTGFVGEKGPTGEPGSAGPPGPPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGE 812
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G P G P G G
Sbjct: 813 PGP-LGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNP 849
Score = 51.6 bits (124), Expect = 1e-07
Identities = 40/141 (28%), Positives = 50/141 (35%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ G G T P GP+ L GP G +G P+G + G T G
Sbjct: 704 MTGFPGAAGRTGPPGPSGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGETGATGPTGFVG 763
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+GPT G P GP PQG G L G +G + G GP + GP
Sbjct: 764 EKGPTGEPGSAGPPGPPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPG 823
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
+GP G G G
Sbjct: 824 ARGP-PGNVGNPGVNGAPGEA 843
Score = 51.6 bits (124), Expect = 1e-07
Identities = 41/161 (25%), Positives = 50/161 (31%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP L+G +G G + GP +G + P G + G L GP
Sbjct: 311 PPGPPGLRGNPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGRPGEPGLMGPRG 370
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP +GP G GP GP G GP P G G
Sbjct: 371 FPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPGPKGPTGEPGKPGEKG 430
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +G P G QGP Q + GP
Sbjct: 431 NVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKGEQGPAGPP 471
Score = 51.6 bits (124), Expect = 1e-07
Identities = 47/161 (29%), Positives = 53/161 (32%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G G P+GPT G +G G GP P G +QG
Sbjct: 404 PRGEAGAIGFPGPKGPTGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKG 463
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
QGP P G GP P G G L G L GP +G P G GPT
Sbjct: 464 EQGPAGPPGFQGLPGPAGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGERGAAGPTG 523
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G R GP P G G P P + G R
Sbjct: 524 PIGSRGPSGPPGPDGNKGEAGAVGPAGAPGPAGPPGIPGER 564
Score = 51.6 bits (124), Expect = 2e-07
Identities = 36/142 (25%), Positives = 39/142 (27%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G +G L G G P G G P P G G
Sbjct: 120 PGAPGENGTPGQKGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA 179
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP GP GP P GP G L GP G G +G L G
Sbjct: 180 PGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNAGPNGLPGAKGAAGLPGVAGA 239
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
G +G P G G
Sbjct: 240 PGLPGPRGIPGPVGAAGATGAR 261
Score = 51.6 bits (124), Expect = 2e-07
Identities = 38/147 (25%), Positives = 47/147 (31%), Gaps = 1/147 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP +G GP GP G +G G + +G T G
Sbjct: 533 PPGPDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGVPGGKGEKGAPGLRGDTGATGRDG 592
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G G P G +G GP G ++G GP P G G
Sbjct: 593 ARGLPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGERGEPGPVGPSGFAGPAGAAG 652
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPT 198
G KG +GP QGP PQ P
Sbjct: 653 QPGA-KGERGTKGPVGEQGPVGPQGPV 678
Score = 51.3 bits (123), Expect = 2e-07
Identities = 41/160 (25%), Positives = 50/160 (31%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G G G L G G G G P P G +G T
Sbjct: 246 RGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGE 305
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P GP +G +G G + GP +G + G P G + G L
Sbjct: 306 IGPAGPPGPPGLRGNPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGRPGEPGL 365
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GPR G GP +GP P GPR
Sbjct: 366 MGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPR 405
Score = 51.3 bits (123), Expect = 2e-07
Identities = 36/140 (25%), Positives = 42/140 (30%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G P GP G +G P G P G + P+ PQG G
Sbjct: 870 PGNAGPPGAVGPVGPVGEPGKLGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDDGEPGD 929
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G +G G G G G GP GP+ P G G
Sbjct: 930 KGDKGIKGDRGHNGLQGLPGLAGHHGDQGAPGAVGPAGPRGPAGPSGPAGKIGRIGAVGP 989
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G G QG P GP
Sbjct: 990 AGA-AGIRGSQGSQGPAGPP 1008
Score = 51.3 bits (123), Expect = 2e-07
Identities = 38/159 (23%), Positives = 46/159 (28%), Gaps = 4/159 (2%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G +G QG G G +G L T G ++G
Sbjct: 62 EDGHPGKPGRPGERGVPGPQGARGFPGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPG 121
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G +G +G GP G G GP P G G
Sbjct: 122 APGENGTPGQKGARGLPGERGRVGAPGP---AGARGSDGSVGPVGPAGPIGSAGPPGFPG 178
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP KG P G P GP P+ L + GP
Sbjct: 179 APGP-KGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPP 216
Score = 51.3 bits (123), Expect = 2e-07
Identities = 45/143 (31%), Positives = 52/143 (36%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G +G +GP QGP PQGP GP P GP GPT
Sbjct: 644 FAGPAGAAGQPGAKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAGPTG 703
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G T P GP+ GP G +G +G G + G T G
Sbjct: 704 MTGFPGAAGRTGPPGPSGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGETGATGPTGFVG 763
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
+GP G P GP PQG
Sbjct: 764 EKGPTGEPGSAGPPGPPGPQGLL 786
Score = 51.3 bits (123), Expect = 2e-07
Identities = 50/148 (33%), Positives = 57/148 (38%), Gaps = 2/148 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP+ GP G +G +GP QGP PQGP P P G GP
Sbjct: 639 VGPSGFAGPAGAAGQPGAKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGD 698
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GPT G G T P GP+ L GP G +G +G P G + G T
Sbjct: 699 AGPTGMTGFPGAAGRTGPPGPSGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGETGATGP 758
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPT 198
G KGPT G P GP PQ
Sbjct: 759 TGFVGEKGPTGEPGSAGPPGPPGPQGLL 786
Score = 51.3 bits (123), Expect = 2e-07
Identities = 41/142 (28%), Positives = 46/142 (32%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP P G G GP GP GP P +G G
Sbjct: 873 AGPPGAVGPVGPVGEPGKLGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDDGEPGDKGD 932
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G +G QG G QG GP +GP GP G GP
Sbjct: 933 KGIKGDRGHNGLQGLPGLAGHHGDQGAPGAVGPAGPRGPAGPSGPAGKIGRIGAVGPAGA 992
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
G R +G P GP P GP
Sbjct: 993 AGIRGSQGSQGPAGPPGPPGPP 1014
Score = 50.9 bits (122), Expect = 2e-07
Identities = 38/141 (26%), Positives = 50/141 (35%), Gaps = 2/141 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+GP +G P GP +GP+ GP +G GP P P G +G
Sbjct: 510 RGPPGERGAAGPTGPIGSRGPSGPPGPDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGV 569
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G +G T G +G G G +G P GP G +
Sbjct: 570 PGGKGEKGAPGLRGDTGATGRDGARGLPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGI 629
Query: 173 QGPR--KGPTLPQGPTLPQGP 191
+G R GP P G P G
Sbjct: 630 RGERGEPGPVGPSGFAGPAGA 650
Score = 50.9 bits (122), Expect = 2e-07
Identities = 38/158 (24%), Positives = 47/158 (29%), Gaps = 1/158 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G ++G G G +G +G GP + GP GP
Sbjct: 110 QPGAPGVKGEPGAPGENGTPGQKGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIG 169
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP G P+G P G GP +G L G + GP GP L G
Sbjct: 170 SAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNAGPNGLPGAKG 229
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G G G P+G P L G
Sbjct: 230 AAGL-PGVAGAPGLPGPRGIPGPVGAAGATGARGLVGE 266
Score = 50.9 bits (122), Expect = 3e-07
Identities = 50/159 (31%), Positives = 58/159 (36%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G GP GP +G +G P GP+ P G +G
Sbjct: 602 APGPAGGAGDRGEGGPAGPAGPAGARGIRGERGEPGPVGPSGFAGPAGAAGQPGAKGERG 661
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+GP QGP PQGP GP G GP GPT + G G T GP+
Sbjct: 662 TKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAGPTGMTGFPGAAGRTGPPGPSG 721
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
L GP GP G +GP Q P T GP
Sbjct: 722 LTGP-PGPPGAAGKEGIRGPRGDQGPVGRSGETGATGPT 759
Score = 50.9 bits (122), Expect = 3e-07
Identities = 42/143 (29%), Positives = 49/143 (34%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ GP +G + P G G + G GP G P +GP L G
Sbjct: 335 VMGPAGSRGTSGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDG 394
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP P GP G GP G G G +G P G QGP
Sbjct: 395 RPGPIGPAGPRGEAGAIGFPGPKGPTGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPG 454
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
LQG + KG P GP QG
Sbjct: 455 LQGVQGEKGEQGPAGPPGFQGLP 477
Score = 50.5 bits (121), Expect = 3e-07
Identities = 42/140 (30%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G GP P G +G T GP P GP +G + G + GP
Sbjct: 282 PGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGVAGVMGPAGS 341
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
+G + P G P G + G L GP G GP +GP G GP
Sbjct: 342 RGTSGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGP 401
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
GPR G G P+GPT
Sbjct: 402 AGPR-GEAGAIGFPGPKGPT 420
Score = 50.5 bits (121), Expect = 3e-07
Identities = 48/159 (30%), Positives = 54/159 (33%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G GP G GP GP +G +G P+ GP G
Sbjct: 596 LPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGERGEPGPVGPSGFAGPAGAAGQPG 655
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G +GP QGP PQGP GP G GP GPT G G T
Sbjct: 656 AKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAGPTGMTGFPGAAGRTG 715
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G T P GP G + P Q P G
Sbjct: 716 PPGP-SGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGET 753
Score = 50.5 bits (121), Expect = 3e-07
Identities = 43/146 (29%), Positives = 52/146 (35%), Gaps = 1/146 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G G GP G +G T GP P GP L+ +G G
Sbjct: 276 SGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGVAGV 335
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP +G + P G P G + G L GP G GP +GP L G
Sbjct: 336 MGPAGSRGTSGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGR 395
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPT 198
GP GP P+G G P+ PT
Sbjct: 396 PGP-IGPAGPRGEAGAIGFPGPKGPT 420
Score = 50.5 bits (121), Expect = 4e-07
Identities = 41/142 (28%), Positives = 46/142 (32%), Gaps = 2/142 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G + G P GP +G G P+GPT G + G GP
Sbjct: 387 VGLPGIDGRPGPIGPAGPRGEAGAIGFPGPKGPTGEPGKPGEKGNVGLAGARGAPGPDGN 446
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G P G QG QGP G L GP G G G L GP
Sbjct: 447 NGAQGPPGLQGVQGEKGEQGPAGPPGFQGLPGPAGPAGEAGKPGERGLHGEFGLPGPAGA 506
Query: 173 QGPR--KGPTLPQGPTLPQGPT 192
+G R G GPT P G
Sbjct: 507 RGERGPPGERGAAGPTGPIGSR 528
Score = 50.5 bits (121), Expect = 4e-07
Identities = 39/141 (27%), Positives = 43/141 (30%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G P G +QG QGP P G GP G L G
Sbjct: 440 APGPDGNNGAQGPPGLQGVQGEKGEQGPAGPPGFQGLPGPAGPAGEAGKPGERGLHGEFG 499
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GP +G P G GPT G GP G G P G GP
Sbjct: 500 LPGPAGARGERGPPGERGAAGPTGPIGSRGPSGPPGPDGNKGEAGAVGPAGAPGPAGPPG 559
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
+ G R G G +G
Sbjct: 560 IPGER-GVAGVPGGKGEKGAP 579
Score = 50.5 bits (121), Expect = 4e-07
Identities = 45/161 (27%), Positives = 55/161 (34%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G +GP QGP QGP GP P G P GP PT G G T
Sbjct: 656 AKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAGPTGMTGFPGAAGRTG 715
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P GP+ GP P G +G +G G + G T G +GPT G
Sbjct: 716 PPGPSGLTGPPGPPGAAGKEGIRGPRGDQGPVGRSGETGATGPTGFVGEKGPTGEPGSAG 775
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP +G G G + + GP
Sbjct: 776 PPGPPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPL 816
Score = 50.5 bits (121), Expect = 4e-07
Identities = 39/159 (24%), Positives = 47/159 (29%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP +GP P G G G +G PQG G ++G
Sbjct: 44 QTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVPGPQGARGFPGTPGLPGFKGIRGHNG 103
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G T G +G G G +G +G GP +G GP
Sbjct: 104 LDGLTGQPGAPGVKGEPGAPGENGTPGQKGARGLPGERGRVGAPGPAGARGSDGSVGPVG 163
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G P G GP P P GPR
Sbjct: 164 PAGP-IGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPR 201
Score = 50.1 bits (120), Expect = 4e-07
Identities = 44/159 (27%), Positives = 51/159 (32%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L GP G G L G L GP +G P G PT P G GP
Sbjct: 476 LPGPAGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGERGAAGPTGPIGSRGPSGPPG 535
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P G G P G P GP + G + G +G G G T G
Sbjct: 536 PDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGVPGGKGEKGAPGLRGDTGATGRDGARG 595
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
L G G P G +G P P ++G R
Sbjct: 596 LPGA-IGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGER 633
Score = 50.1 bits (120), Expect = 4e-07
Identities = 36/159 (22%), Positives = 44/159 (27%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G +G G GP + GP +GP G + G G
Sbjct: 794 LPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDG 853
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P G G +G GP GP G G GP GP GP
Sbjct: 854 PPGRDGQPGHKGERGTPGNAGPPGAVGPVGPVGEPGKLGNRGEPGPAGAVGPAGAVGPRG 913
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP +G G +G + L G
Sbjct: 914 PSGP-QGIRGDDGEPGDKGDKGIKGDRGHNGLQGLPGLA 951
Score = 49.7 bits (119), Expect = 5e-07
Identities = 43/160 (26%), Positives = 52/160 (32%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G T GP P GP L+G +G G GP + + P G G +
Sbjct: 300 RGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGR 359
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G GP G GP +GP L G GP GP G GP
Sbjct: 360 PGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPGPKGP 419
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G G +G P Q P LQG +
Sbjct: 420 TGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQ 459
Score = 49.7 bits (119), Expect = 6e-07
Identities = 45/169 (26%), Positives = 49/169 (28%), Gaps = 11/169 (6%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G L GP G GP +GP G GP P G GP P
Sbjct: 360 PGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPGPKGP 419
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G G +G G QGP LQG +G P GP QG
Sbjct: 420 TGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKGEQGPAGPPGFQGLPGP 479
Query: 173 QGPR-----------KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
GP G GP +G P PT G R
Sbjct: 480 AGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGERGAAGPTGPIGSR 528
Score = 49.7 bits (119), Expect = 6e-07
Identities = 43/158 (27%), Positives = 48/158 (30%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G + G GP G GP +GP G P P GP G
Sbjct: 354 NGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGF 413
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P G G G +G G QGP LQG +G GP
Sbjct: 414 PGPKGPTGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKGEQGPAGPPGF 473
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
QG GP P G G L P +G R
Sbjct: 474 QGL-PGPAGPAGEAGKPGERGLHGEFGLPGPAGARGER 510
Score = 49.3 bits (118), Expect = 7e-07
Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G GP +GP+ GP +G GP GP +G + G
Sbjct: 515 ERGAAGPTGPIGSRGPSGPPGPDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGVPGGKG 574
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G +G T G +G G G +G GP P G ++G
Sbjct: 575 EKGAPGLRGDTGATGRDGARGLPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGERG 634
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
GP GP+ GP G
Sbjct: 635 EPGP-VGPSGFAGPAGAAGQP 654
Score = 49.3 bits (118), Expect = 7e-07
Identities = 37/160 (23%), Positives = 47/160 (29%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G +G P G + G T G +GPT G P PQG G
Sbjct: 735 EGIRGPRGDQGPVGRSGETGATGPTGFVGEKGPTGEPGSAGPPGPPGPQGLLGAPGFLGL 794
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G G GP + GP +GP G + G G G
Sbjct: 795 PGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGP 854
Query: 173 QGP--RKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G + G +G GP P G R
Sbjct: 855 PGRDGQPGHKGERGTPGNAGPPGAVGPVGPVGEPGKLGNR 894
Score = 49.3 bits (118), Expect = 7e-07
Identities = 38/140 (27%), Positives = 42/140 (30%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G L GP P G G L G GP +G GPT G P
Sbjct: 471 PGFQGLPGPAGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGERGAAGPTGPIGSRGP 530
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P G G P G GP + G + G +G G G T
Sbjct: 531 SGPPGPDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGVPGGKGEKGAPGLRGDTGATGR 590
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
G R G G P G
Sbjct: 591 DGAR-GLPGAIGAPGPAGGA 609
Score = 49.3 bits (118), Expect = 8e-07
Identities = 39/140 (27%), Positives = 43/140 (30%), Gaps = 1/140 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G GP GP GP P GP +G +G +G
Sbjct: 884 PVGEPGKLGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDDGEPGDKGDKGIKGDRGHNG 943
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
QG G QG GP +GP GP G GP G QG
Sbjct: 944 LQGLPGLAGHHGDQGAPGAVGPAGPRGPAGPSGPAGKIGRIGAVGPAGAAGIRGSQGSQG 1003
Query: 172 LQGPRKGPTLPQGPTLPQGP 191
GP GP P GP P
Sbjct: 1004 PAGP-PGPPGPPGPPGPPSG 1022
Score = 49.0 bits (117), Expect = 1e-06
Identities = 40/160 (25%), Positives = 50/160 (31%), Gaps = 2/160 (1%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP +G +G G GP +G + P G + G
Sbjct: 306 IGPAGPPGPPGLRGNPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGRPGEPGL 365
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP G GP +GP L G GP GP G GP G
Sbjct: 366 MGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPGPKGPTGEPGK 425
Query: 173 QGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G + G +G P G Q P LQ +G +
Sbjct: 426 PGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKGEQ 465
Score = 49.0 bits (117), Expect = 1e-06
Identities = 40/158 (25%), Positives = 42/158 (26%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G T GPT G G GP P GP G +G L G
Sbjct: 750 SGETGATGPTGFVGEKGPTGEPGSAGPPGPPGPQGLLGAPGFLGLPGSRGERGLPGVAGS 809
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G P G P G P G G G G GP G +G
Sbjct: 810 VGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGT 869
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G GP GP P G P GP
Sbjct: 870 PGNA-GPPGAVGPVGPVGEPGKLGNRGEPGPAGAVGPA 906
Score = 49.0 bits (117), Expect = 1e-06
Identities = 34/143 (23%), Positives = 37/143 (25%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G G G G G G +G L G G
Sbjct: 95 FKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGTPGQKGARGLPGERGRVGAPGPAGARG 154
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G P GP P G P G GP GP GP GP G L GP
Sbjct: 155 SDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVG 214
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G G +G G
Sbjct: 215 PPGNAGPNGLPGAKGAAGLPGVA 237
Score = 49.0 bits (117), Expect = 1e-06
Identities = 38/158 (24%), Positives = 46/158 (29%), Gaps = 1/158 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
QGP G GP +GP G G G + PQG G
Sbjct: 32 FQGPPGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVPGPQGARGFPGTPG 91
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G +G G T G ++G G G +G +G GP
Sbjct: 92 LPGFKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGTPGQKGARGLPGERGRVGAPGPAG 151
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
+G G P GP P G P P GP
Sbjct: 152 ARGS-DGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGP 188
Score = 49.0 bits (117), Expect = 1e-06
Identities = 41/158 (25%), Positives = 43/158 (27%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
QGP G T GPT G G GP P GP L G +G
Sbjct: 744 QGPVGRSGETGATGPTGFVGEKGPTGEPGSAGPPGPPGPQGLLGAPGFLGLPGSRGERGL 803
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G G P G P G G G G G GP G
Sbjct: 804 PGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH 863
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G R G GP GP P GP
Sbjct: 864 KGER-GTPGNAGPPGAVGPVGPVGEPGKLGNRGEPGPA 900
Score = 49.0 bits (117), Expect = 1e-06
Identities = 42/158 (26%), Positives = 48/158 (30%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP L GP P G + GP QGP G GP + P P G G
Sbjct: 9 PGPMGLMGPRGPPGASGAPGPQGFQGPPGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGK 68
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G PQG G L G ++G L G T G +G G
Sbjct: 69 PGRPGERGVPGPQGARGFPGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGT 128
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G KG G G P GP
Sbjct: 129 PGQ-KGARGLPGERGRVGAPGPAGARGSDGSVGPVGPA 165
Score = 49.0 bits (117), Expect = 1e-06
Identities = 44/143 (30%), Positives = 49/143 (34%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+ G GP P+G G +GPT G +G L GP G
Sbjct: 392 IDGRPGPIGPAGPRGEAGAIGFPGPKGPTGEPGKPGEKGNVGLAGARGAPGPDGNNGAQG 451
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P G QG QGP P G L GP G G L G GP +G
Sbjct: 452 PPGLQGVQGEKGEQGPAGPPGFQGLPGPAGPAGEAGKPGERGLHGEFGLPGPAGARGERG 511
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G R GPT P G P GP
Sbjct: 512 PPGERGAAGPTGPIGSRGPSGPP 534
Score = 49.0 bits (117), Expect = 1e-06
Identities = 32/143 (22%), Positives = 37/143 (25%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L G G +G L G G P G P G G G
Sbjct: 785 LLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAG 844
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G GP G +G G G GP G +G G
Sbjct: 845 RDGNPGNDGPPGRDGQPGHKGERGTPGNAGPPGAVGPVGPVGEPGKLGNRGEPGPAGAVG 904
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G +GP+ PQG G
Sbjct: 905 PAGAVGPRGPSGPQGIRGDDGEP 927
Score = 49.0 bits (117), Expect = 1e-06
Identities = 37/141 (26%), Positives = 40/141 (28%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP GP GP GP G GP P G +G L G
Sbjct: 179 APGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNAGPNGLPGAKGAAGLPGVAG 238
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G P+G P G G L G G G G GP G
Sbjct: 239 APGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEG 298
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
+G G P GP P G
Sbjct: 299 KRGS-TGEIGPAGPPGPPGLR 318
Score = 48.6 bits (116), Expect = 1e-06
Identities = 39/147 (26%), Positives = 45/147 (30%), Gaps = 1/147 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+QG QGP P G L GP G G G L P +G G
Sbjct: 458 VQGEKGEQGPAGPPGFQGLPGPAGPAGEAGKPGERGLHGEFGLPGPAGARGERGPPGERG 517
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
GPT P G P GP P G G G GP + G G +G
Sbjct: 518 AAGPTGPIGSRGPSGPPGPDGNKGEAGAVGPAGAPGPAGPPGIPGERGVAGVPGGKGEKG 577
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPT 198
G +G T G +G
Sbjct: 578 APGL-RGDTGATGRDGARGLPGAIGAP 603
Score = 48.6 bits (116), Expect = 1e-06
Identities = 38/159 (23%), Positives = 49/159 (30%), Gaps = 1/159 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G GP +G + +G G P GP+ +G P GP G
Sbjct: 260 ARGLVGEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRG 319
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G G P G GP ++GP G G P+G G
Sbjct: 320 NPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIG 379
Query: 172 LQGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G +GP G GP P P GP+
Sbjct: 380 PAGK-EGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPGPK 417
Score = 48.6 bits (116), Expect = 1e-06
Identities = 43/158 (27%), Positives = 52/158 (32%), Gaps = 1/158 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
+G L+G T G +G G P G +G P P G ++G
Sbjct: 576 KGAPGLRGDTGATGRDGARGLPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGERGE 635
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P G P G G +G G GP G P GP GP
Sbjct: 636 PGPVGPSGFAGPAGAAGQPGAKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGP 695
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
+G GPT G G T P P+ L P G
Sbjct: 696 RGD-AGPTGMTGFPGAAGRTGPPGPSGLTGPPGPPGAA 732
Score = 48.6 bits (116), Expect = 2e-06
Identities = 41/161 (25%), Positives = 49/161 (30%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L+G T G +G G G +G P GP +G GP
Sbjct: 581 LRGDTGATGRDGARGLPGAIGAPGPAGGAGDRGEGGPAGPAGPAGARGIRGERGEPGPVG 640
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P G P G G +G G GP G GP GP +G
Sbjct: 641 PSGFAGPAGAAGQPGAKGERGTKGPVGEQGPVGPQGPVGAAGPPGPVGAAGPAGPRGDAG 700
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G GP P G T P P ++GPR
Sbjct: 701 PTGMTGFPGAAGRTGPPGPSGLTGPPGPPGAAGKEGIRGPR 741
Score = 48.6 bits (116), Expect = 2e-06
Identities = 36/161 (22%), Positives = 41/161 (25%), Gaps = 2/161 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G QG P G G T G P GP G G + GP
Sbjct: 23 ASGAPGPQGFQGPPGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVPGPQG 82
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G G +G G L G G G G +G L G
Sbjct: 83 ARGFPGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPGAPGENGTPGQKGARGLPGERG 142
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPR 210
G G G P GP P GP+
Sbjct: 143 RVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPK 183
Score = 48.2 bits (115), Expect = 2e-06
Identities = 37/160 (23%), Positives = 47/160 (29%), Gaps = 2/160 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP GP G + GP QGP G P +GP G
Sbjct: 2 FDAKGGGPGPMGLMGPRGPPGASGAPGPQGFQGPPGEPGEPGQTGPAGARGPPGPPGKAG 61
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
G G +G PQG G L G ++G L G T G ++G
Sbjct: 62 EDGHPGKPGRPGERGVPGPQGARGFPGTPGLPGFKGIRGHNGLDGLTGQPGAPGVKGEPG 121
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G G +G +G P + GP
Sbjct: 122 APGENGTPGQKGARGLPGERGRVGAPGPAGARGSDGSVGP 161
Score = 47.8 bits (114), Expect = 2e-06
Identities = 33/141 (23%), Positives = 42/141 (29%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP G +G + G +G +G T G + G G
Sbjct: 551 APGPAGPPGIPGERGVAGVPGGKGEKGAPGLRGDTGATGRDGARGLPGAIGAPGPAGGAG 610
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G P GP P G +G GP G G G +G G
Sbjct: 611 DRGEGGPAGPAGPAGARGIRGERGEPGPVGPSGFAGPAGAAGQPGAKGERGTKGPVGEQG 670
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
GP +GP GP P G
Sbjct: 671 PVGP-QGPVGAAGPPGPVGAA 690
Score = 47.8 bits (114), Expect = 2e-06
Identities = 38/143 (26%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP P G +G + G +G +G T +G G P
Sbjct: 546 VGPAGAPGPAGPPGIPGERGVAGVPGGKGEKGAPGLRGDTGATGRDGARGLPGAIGAPGP 605
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
G +G P GP P G ++G GP G G G +G
Sbjct: 606 AGGAGDRGEGGPAGPAGPAGARGIRGERGEPGPVGPSGFAGPAGAAGQPGAKGERGTKGP 665
Query: 173 QGPRKGPTLPQGPTLPQGPTLPQ 195
G +GP PQGP GP P
Sbjct: 666 VGE-QGPVGPQGPVGAAGPPGPV 687
Score = 47.8 bits (114), Expect = 2e-06
Identities = 36/140 (25%), Positives = 48/140 (34%), Gaps = 1/140 (0%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
G + G GP + GP G T +G GP + + +G G P
Sbjct: 231 AGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGAVGQPGP 290
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP+ +G G P GP G G L G + G P G GP +
Sbjct: 291 PGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGVAGVMGPAGSRGTSGPAGV 350
Query: 173 QGPRKGPTLPQGPTLPQGPT 192
+GP G + G GP
Sbjct: 351 RGP-NGDSGRPGEPGLMGPR 369
Score = 47.0 bits (112), Expect = 4e-06
Identities = 41/160 (25%), Positives = 51/160 (31%), Gaps = 2/160 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
+G L G + P GP GP L G G G L P GP G T
Sbjct: 200 PRGEVGLPGLSGPVGPPGNAGPNGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATG 259
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
+G GP +G + +G G GP+ +G G P GP G
Sbjct: 260 ARGLVGEPGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRG 319
Query: 172 LQGPR--KGPTLPQGPTLPQGPTLPQDPTLLQDPTLLQGP 209
G R G G P G P ++ P G
Sbjct: 320 NPGSRGLPGADGVAGVMGPAGSRGTSGPAGVRGPNGDSGR 359
Score = 47.0 bits (112), Expect = 4e-06
Identities = 37/141 (26%), Positives = 43/141 (30%), Gaps = 1/141 (0%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
G G P+G G G P G G P P+G G
Sbjct: 356 DSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGAIGFPG 415
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
P+GPT G +G G GP G G +QG QGP G
Sbjct: 416 PKGPTGEPGKPGEKGNVGLAGARGAPGPDGNNGAQGPPGLQGVQGEKGEQGPAGPPGFQG 475
Query: 172 LQGPRKGPTLPQGPTLPQGPT 192
L GP GP G +G
Sbjct: 476 LPGP-AGPAGEAGKPGERGLH 495
Score = 46.6 bits (111), Expect = 7e-06
Identities = 36/143 (25%), Positives = 45/143 (31%), Gaps = 2/143 (1%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
L GP G +G +G G + G T P G + PT G GP
Sbjct: 722 LTGPPGPPGAAGKEGIRGPRGDQGPVGRSGETGATGPTGFVGEKGPTGEPGSAGPPGPPG 781
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTL 171
PQG G G +G + G GP + GP +GP G + G
Sbjct: 782 PQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPG 841
Query: 172 LQGPR--KGPTLPQGPTLPQGPT 192
G G P G G
Sbjct: 842 EAGRDGNPGNDGPPGRDGQPGHK 864
Score = 45.1 bits (107), Expect = 2e-05
Identities = 37/122 (30%), Positives = 42/122 (34%)
Query: 53 QGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLP 112
GP GP P GP ++G G +G +G LQ G QG
Sbjct: 903 VGPAGAVGPRGPSGPQGIRGDDGEPGDKGDKGIKGDRGHNGLQGLPGLAGHHGDQGAPGA 962
Query: 113 QGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLL 172
GP P+GP P GP G GP G QG GP P GP GP
Sbjct: 963 VGPAGPRGPAGPSGPAGKIGRIGAVGPAGAAGIRGSQGSQGPAGPPGPPGPPGPPGPPSG 1022
Query: 173 QG 174
Sbjct: 1023 GY 1024
Score = 42.8 bits (101), Expect = 9e-05
Identities = 34/117 (29%), Positives = 38/117 (32%)
Query: 52 LQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTL 111
GP GP +G G +G +G QG L QG GP
Sbjct: 908 AVGPRGPSGPQGIRGDDGEPGDKGDKGIKGDRGHNGLQGLPGLAGHHGDQGAPGAVGPAG 967
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQG 168
P+GP P GP G GP G QG GP GP P GP
Sbjct: 968 PRGPAGPSGPAGKIGRIGAVGPAGAAGIRGSQGSQGPAGPPGPPGPPGPPGPPSGGY 1024
>1rm1_C Transcription initiation factor IIA large chain; yeast TFIIA, TBP
protein, ATA-box DNA, transcription/DNA complex; 2.50A
{Saccharomyces cerevisiae}
Length = 286
Score = 44.9 bits (104), Expect = 1e-05
Identities = 14/195 (7%), Positives = 41/195 (21%), Gaps = 2/195 (1%)
Query: 59 QGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLP 118
Q P + +++ +L
Sbjct: 53 TFSWDNQFNEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHS 112
Query: 119 QGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRKG 178
+ + T G T + + P+ + +
Sbjct: 113 GETNINTNTVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENID 172
Query: 179 PTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPRYKEKELVERSAYGETE--DEEEESDTED 236
+ + + + + ++ KEK D+ ++
Sbjct: 173 DESEKKDDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLIS 232
Query: 237 IRDDDDDDMEIVVCT 251
++D D +++C
Sbjct: 233 EGEEDGPDENLMLCL 247
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici
SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens}
PDB: 3cw1_A
Length = 231
Score = 34.6 bits (79), Expect = 0.023
Identities = 33/150 (22%), Positives = 42/150 (28%), Gaps = 7/150 (4%)
Query: 45 NQIYWTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPT 104
N + T+ P G GP G G +P G + Q P GP
Sbjct: 76 NLVSMTVEGPPPKDTGIARVPLAGAAGGP----GIGRAAGRGIPAGVPMPQAPAGLAGPV 131
Query: 105 LLQGPTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPT 164
G Q T PQG ++ PT P + +G P
Sbjct: 132 RGVGGPSQQVMT-PQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMG 190
Query: 165 LLQGPTLLQGPRKGPTLPQGPTLPQGPTLP 194
G GP +P G P G P
Sbjct: 191 PPPGMRPPMGP--PMGIPPGRGTPMGMPPP 218
Score = 29.2 bits (65), Expect = 1.2
Identities = 24/117 (20%), Positives = 33/117 (28%), Gaps = 5/117 (4%)
Query: 54 GPTLLQGPTLPQGPTLLQGPTL-----LQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQG 108
G + G +PQ P L GP Q PQG ++ PT
Sbjct: 111 GRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPP 170
Query: 109 PTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTL 165
P + +G P P G GP + P + P P +
Sbjct: 171 GRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGM 227
Score = 27.7 bits (61), Expect = 4.8
Identities = 26/144 (18%), Positives = 32/144 (22%), Gaps = 4/144 (2%)
Query: 66 GPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLPQGPTLPQ 125
T+ P G GP + G + G +PQ P GP
Sbjct: 79 SMTVEGPPPKDTGIARVPLAGAAGGPGI----GRAAGRGIPAGVPMPQAPAGLAGPVRGV 134
Query: 126 GPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPTLLQGPRKGPTLPQGP 185
G Q T T+ P G P P G P
Sbjct: 135 GGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPG 194
Query: 186 TLPQGPTLPQDPTLLQDPTLLQGP 209
P P P + P
Sbjct: 195 MRPPMGPPMGIPPGRGTPMGMPPP 218
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 35.0 bits (80), Expect = 0.030
Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 38/131 (29%)
Query: 5 QCYYRVRCRYTR-YPPPHPMWYAATAARRMSAWFLAARELWNQIYWTLL--QGPTL---- 57
+ Y R R + SA F A E Q+ + QG T
Sbjct: 124 KNYITARIMAKRPFDKKSN-----------SALFRAVGEGNAQLV-AIFGGQGNTDDYFE 171
Query: 58 -LQ----------GPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTL---LQDP-TLPQG 102
L+ G + L L++ + QG + L++P P
Sbjct: 172 ELRDLYQTYHVLVGDLIKFSAETLS--ELIRTTLDAE-KVFTQGLNILEWLENPSNTPDK 228
Query: 103 PTLLQGP-TLP 112
LL P + P
Sbjct: 229 DYLLSIPISCP 239
Score = 28.1 bits (62), Expect = 4.2
Identities = 62/340 (18%), Positives = 105/340 (30%), Gaps = 116/340 (34%)
Query: 6 CYYRVRCRYTRYPPPH--PMWYAATAARR--MSAWFLAARELWNQIYWTLLQGPTLL--Q 59
+Y V + + P AT + ++A +A + W + ++ + T+L
Sbjct: 247 AHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFI 306
Query: 60 GPTLPQGPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQG-PTLPQGPTLP 118
G ++ P +LP P++L+D +L +G P+ P L
Sbjct: 307 G---------VRC----YE-AYPN-TSLP--PSILED-SLENN----EGVPS----PMLS 340
Query: 119 -QGPTLPQ--------GPTLPQGP----TLLQGPT--LLQGPTL-LQG-PTLLQGPTLPQ 161
T Q LP G +L+ G ++ GP L G L+ P
Sbjct: 341 ISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPS 400
Query: 162 GPTLLQGPTLLQGP---RKGPT-----LPQG-----PTL-PQGPTLPQDPTLLQDPTLLQ 207
G L Q + P RK LP L P + +D L +
Sbjct: 401 G--LDQS----RIPFSERK-LKFSNRFLPVASPFHSHLLVPASDLINKD---LVKNNVS- 449
Query: 208 GPRYKEKEL---VERSAYGETEDEEEESDTEDIRDDDDDDMEIVV---CTSQ---DSEDL 258
+ K++ V Y +T D D+R E +V ++
Sbjct: 450 ---FNAKDIQIPV----Y-DTFDG------SDLRVLSGSISERIVDCIIRLPVKWETTTQ 495
Query: 259 PGPSH---------------SKRM---RGTRELLTMKLDS 280
+H + R G R ++ LD
Sbjct: 496 FKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDI 535
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA;
HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP:
b.56.1.1 PDB: 1ytf_C*
Length = 79
Score = 31.1 bits (70), Expect = 0.083
Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 6/41 (14%)
Query: 223 GETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSH 263
G + + + ++ D DDD + E+ +
Sbjct: 1 GSSALLDTDEVGSELDDSDDDY------LISEGEEDGPDEN 35
Score = 30.0 bits (67), Expect = 0.22
Identities = 6/39 (15%), Positives = 16/39 (41%)
Query: 213 EKELVERSAYGETEDEEEESDTEDIRDDDDDDMEIVVCT 251
L++ G D+ ++ ++D D +++C
Sbjct: 2 SSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCL 40
>2klw_A (PKG)10; collagen, synthetic peptide, heterotrimer, de novo
protein; HET: HYP; NMR {Synthetic}
Length = 32
Score = 29.7 bits (67), Expect = 0.096
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 107 QGPTLPQGPTLPQGPTLPQGPTLPQGPT 134
+GP P+GP P+GP P+GP P+GP
Sbjct: 3 KGPKGPKGPKGPKGPKGPKGPKGPKGPK 30
Score = 28.9 bits (65), Expect = 0.17
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 112 PQGPTLPQGPTLPQGPTLPQGPTLLQGPT 140
P+GP P+GP P+GP P+GP +GP
Sbjct: 2 PKGPKGPKGPKGPKGPKGPKGPKGPKGPK 30
Score = 27.8 bits (62), Expect = 0.34
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Query: 100 PQGPTLLQGPTLPQGPTLPQGPTLPQGPTLPQG 132
P+GP +GP P+GP P+GP P+GP P+G
Sbjct: 2 PKGP---KGPKGPKGPKGPKGPKGPKGPKGPKG 31
Score = 26.6 bits (59), Expect = 0.99
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 64 PQGPTLLQGPTLLQGPTLPQGPTLPQGPT 92
P+GP +GP +GP P+GP P+GP
Sbjct: 2 PKGPKGPKGPKGPKGPKGPKGPKGPKGPK 30
Score = 26.6 bits (59), Expect = 1.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 97 PTLPQGPTLLQGPTLPQGPTLPQGPTLPQG 126
P P+GP +GP P+GP P+GP P+G
Sbjct: 2 PKGPKGPKGPKGPKGPKGPKGPKGPKGPKG 31
Score = 26.2 bits (58), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 118 PQGPTLPQGPTLPQGPTLLQGPTLLQGPT 146
P+GP P+GP P+GP +GP +GP
Sbjct: 2 PKGPKGPKGPKGPKGPKGPKGPKGPKGPK 30
Score = 24.3 bits (53), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 77 QGPTLPQGPTLPQGPTLLQDPTLPQGPT 104
+GP P+GP P+GP + P P+GP
Sbjct: 3 KGPKGPKGPKGPKGPKGPKGPKGPKGPK 30
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 31.3 bits (70), Expect = 0.24
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 7/35 (20%)
Query: 212 KEKELVERSAYGETEDEEEESDTEDIRDDDDDDME 246
+ K L E D + ++ R+ D+E
Sbjct: 94 QRKRLQEL-------DAASKVMEQEWREKAKKDLE 121
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone
chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A
{Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A
3c9b_A 3q33_B* 3q35_B* 3dm7_A
Length = 264
Score = 31.2 bits (70), Expect = 0.34
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 221 AYGETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSHSK 265
A + EDEE ES D +DDD + S++ P K
Sbjct: 219 AQRDLEDEEGESGLSADGDSEDDDGSLGEVDLPLSDEEPSSKKRK 263
Score = 28.9 bits (64), Expect = 1.7
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 223 GETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSHSKR 266
+ + E+EE ++ D D +D + + PS KR
Sbjct: 219 AQRDLEDEEGESGLSADGDSEDDDGSLGEVDLPLSDEEPSSKKR 262
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding,
phosphorylation, protein biosynthesis, translation
inititation; 1.8A {Homo sapiens}
Length = 208
Score = 30.5 bits (68), Expect = 0.42
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 226 EDEEEESDTEDIRDDDDDDMEIVV 249
E EEE S E+ +D+D+++E+V
Sbjct: 153 EAEEESSGGEE--EDEDENIEVVY 174
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.4 bits (70), Expect = 0.48
Identities = 18/139 (12%), Positives = 39/139 (28%), Gaps = 40/139 (28%)
Query: 179 PTLPQGPTLPQGPTLPQDPTLLQDPTLLQGPRYKEKELVERSAYGETEDEEEESDTEDIR 238
P L + LL+ Y+ LV +++
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL----------------NVQ 254
Query: 239 DDDD-DDMEI---VVCTSQDSE--DLPGPSHSKRMRG-----------TRELLTMKLD-- 279
+ + + ++ T++ + D + + + + LL LD
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 280 -SCLHFPRQ--RGSPWTVS 295
L PR+ +P +S
Sbjct: 315 PQDL--PREVLTTNPRRLS 331
>3fs3_A Nucleosome assembly protein 1, putative; protein localization,
histone recognition, structural analysis, CHA; 2.30A
{Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Length = 359
Score = 30.3 bits (67), Expect = 0.76
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 224 ETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSED 257
E+E SD + +++ S +S
Sbjct: 295 ESESNSIVSDVDSSYSSSENNSNYNSYESNNSAY 328
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat
motif; 1.50A {Saccharomyces cerevisiae}
Length = 177
Score = 29.7 bits (66), Expect = 0.81
Identities = 3/20 (15%), Positives = 11/20 (55%)
Query: 224 ETEDEEEESDTEDIRDDDDD 243
ET + +++ + +++ D
Sbjct: 158 ETAESDDDEEDDELERPHRD 177
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A
{Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Length = 417
Score = 29.9 bits (66), Expect = 0.94
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 215 ELVERSAYGETEDEEEESDTEDIRDDDDDDME 246
+E + E+ +E+ D E+ D +D +
Sbjct: 363 AALEFEFEEDEEEADEDEDEEEDDDHGLEDDD 394
Score = 29.1 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 216 LVERSAYGETEDEEEESDTEDIRDDDDDDME 246
+ EDEEE + ED +DDD +E
Sbjct: 361 TGAALEFEFEEDEEEADEDEDEEEDDDHGLE 391
Score = 28.8 bits (63), Expect = 2.3
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 223 GETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGP 261
E ++EE + D ++ DDD + ++++ +D G
Sbjct: 369 FEEDEEEADEDEDEEEDDDHGLEDDDGESAEEQDDFAGR 407
Score = 28.0 bits (61), Expect = 3.8
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 223 GETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSED 257
G + E E D E+ +D+D++ + D +
Sbjct: 362 GAALEFEFEEDEEEADEDEDEEEDDDHGLEDDDGE 396
Score = 27.6 bits (60), Expect = 6.0
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 213 EKELVERSAYGETEDEEEESDTEDIRDDDDDDME 246
E E DE+E+ + +D +DDD E
Sbjct: 363 AALEFEFEEDEEEADEDEDEEEDDDHGLEDDDGE 396
Score = 26.8 bits (58), Expect = 9.1
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 224 ETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSHSK 265
E E EE+E + ++ D+++DD + +S + +
Sbjct: 366 EFEFEEDEEEADEDEDEEEDDDHGLEDDDGESAEEQDDFAGR 407
>3iyo_A Capsid protein; amino acid sequence, cryoelectron microscopy,
dimerization, image processing, computer-assist
molecular sequence DATA; 10.50A {Hepatitis e virus}
Length = 660
Score = 29.2 bits (64), Expect = 2.0
Identities = 15/93 (16%), Positives = 19/93 (20%)
Query: 78 GPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLPQGPTLPQGPTLPQGPTLLQ 137
PT P P + P P Q P + P
Sbjct: 57 HPTNPFAPDVTAAAGAGPRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPA 116
Query: 138 GPTLLQGPTLLQGPTLLQGPTLPQGPTLLQGPT 170
T +G L + L P T
Sbjct: 117 HDTPPVPDVDSRGAILRRQYNLSTSPLTSSVAT 149
Score = 26.9 bits (58), Expect = 9.7
Identities = 16/93 (17%), Positives = 20/93 (21%)
Query: 66 GPTLLQGPTLLQGPTLPQGPTLPQGPTLLQDPTLPQGPTLLQGPTLPQGPTLPQGPTLPQ 125
PT P + P P Q P + P P
Sbjct: 57 HPTNPFAPDVTAAAGAGPRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPA 116
Query: 126 GPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPT 158
T P +G L + L P T
Sbjct: 117 HDTPPVPDVDSRGAILRRQYNLSTSPLTSSVAT 149
>3iyd_F RNA polymerase sigma factor RPOD; transcription, initiation, class
I, activator, RNA polymeras holoenzyme, sigma70, open
complex, CAP, CRP; HET: DNA CMP; 19.80A {Escherichia
coli k-12}
Length = 613
Score = 28.8 bits (64), Expect = 2.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 222 YGETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSEDLPGPSHSKRMR----GTRELLT 275
E D ++ E+ D+D + V +S +SE + RM GT ELLT
Sbjct: 56 MEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGR-TTDPVRMYMREMGTVELLT 112
>1vq8_G Acidic ribosomal protein P0 homolog; ribosome 50S, protein-protein
complex, RNA-RNA complex, PROT complex, peptidyl
transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS;
2.20A {Haloarcula marismortui} SCOP: j.84.1.1 PDB:
1k73_I* 1k8a_I* 1k9m_I* 1kc8_I* 1kd1_I* 1kqs_G* 1m1k_I*
1m90_I* 1n8r_I* 1nji_I* 1q7y_I* 1q81_I* 1q82_I* 1q86_I*
1qvf_G 1qvg_G 1s72_G* 1vq4_G* 1vq5_G* 1vq6_G* ...
Length = 348
Score = 28.7 bits (63), Expect = 2.5
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 212 KEKELVERSAYGETEDEEEESDTEDIRDDDDDDM 245
+ + +A + D ++ ++ D DDDD+D
Sbjct: 307 PTDDQDDDTASEDDADADDAAEEADDDDDDDEDA 340
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer
complex, cytochrome BC1 complex,
mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ
HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces
cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F*
1p84_F* 2ibz_H* 1kyo_F*
Length = 146
Score = 27.6 bits (60), Expect = 3.5
Identities = 8/37 (21%), Positives = 23/37 (62%)
Query: 212 KEKELVERSAYGETEDEEEESDTEDIRDDDDDDMEIV 248
+ +E E + + +++E+E D +D +D++++ E+
Sbjct: 38 EGEEKEEENGDEDEDEDEDEDDDDDDDEDEEEEEEVT 74
>2o8g_I IPP-2, protein phosphatase inhibitor 2; hydrolase-inhibitor comple;
2.50A {Mus musculus} PDB: 2o8a_I
Length = 206
Score = 27.9 bits (61), Expect = 3.5
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 211 YKEKELVERSAYGETEDEEEESDTEDIRDDDDDDMEIVVCTSQDSED 257
Y E ++ + ++D ++ + E++ + D D V +SQ S
Sbjct: 149 YNEGLNIKLARQLISKDLHDDDEDEEMAETADGDSMNVEESSQGSTT 195
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular
matrix, adhesion, connective tissue, repeat; HET: CPS;
1.9A {Mus musculus} SCOP: b.22.1.1
Length = 178
Score = 27.3 bits (60), Expect = 4.1
Identities = 13/64 (20%), Positives = 16/64 (25%), Gaps = 3/64 (4%)
Query: 106 LQGPTLPQGPTLPQGPTLPQGPTLPQGPTLLQGPTLLQGPTLLQGPTLLQGPTLPQGPTL 165
+ PQG LP G P G G + P T+P P
Sbjct: 8 VMPTPSPQGEYLPDMGLGIDGVKTPHAYA---GKKGKHGGPAYEMPAFTAELTVPFPPVG 64
Query: 166 LQGP 169
Sbjct: 65 APVK 68
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center
monooxygenase; 1.70A {Methylococcus capsulatus str}
SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C
1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C
1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Length = 384
Score = 27.8 bits (61), Expect = 4.6
Identities = 7/39 (17%), Positives = 10/39 (25%), Gaps = 2/39 (5%)
Query: 14 YTRYPPPHPMWYAATAARRMSAW--FLAARELWNQIYWT 50
++ P W T R W W+ Y
Sbjct: 68 TQKFHGGRPSWGNETTELRTVDWFKHRDPLRRWHAPYVK 106
>1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein,
gene regulation; 2.90A {Aquifex aeolicus} SCOP:
b.34.14.1 c.55.3.10 PDB: 2f8s_A 2f8t_A 2nub_A
Length = 706
Score = 27.8 bits (61), Expect = 5.6
Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Query: 7 YYRVRCRYTRYPPPHPMWYAATAARRMSAWFLAARELWNQIYW 49
Y + + P + Y+ + M ++ + +YW
Sbjct: 666 NYSS-FQPIKLPAT--VHYSDKITKLMLRGIEPIKKEGDIMYW 705
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon
metabolism; 2.00A {Methylosinus trichosporium} SCOP:
a.25.1.2 PDB: 1mhz_B
Length = 395
Score = 27.4 bits (60), Expect = 6.0
Identities = 6/39 (15%), Positives = 11/39 (28%), Gaps = 2/39 (5%)
Query: 14 YTRYPPPHPMWYAATAARRMSAW--FLAARELWNQIYWT 50
++ P W + R + W W+ Y
Sbjct: 76 TQKFHGGRPSWGNESTELRTTDWYRHRDPARRWHHPYVK 114
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein
transport importin, transportin, transport protein;
2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A
2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Length = 852
Score = 27.5 bits (60), Expect = 6.5
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 214 KELVERSAYGETEDEEEESDTEDIRDDDDDDMEIVVCTS 252
LV Y + + + D E DD + +
Sbjct: 302 PVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKC 340
>2j7n_A RNA-dependent RNA polymerase; RNAI response, RNA-directed RNA
polymerase, hydrolase; 2.30A {Neurospora crassa} PDB:
2j7o_A
Length = 1022
Score = 26.9 bits (58), Expect = 9.8
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 213 EKELVERSAYGETEDEEEESDTEDIRDDDDDDMEIV 248
+K+ ++ D E D E DDD + +
Sbjct: 979 DKKFTKQYVARLEGDGSEYPDPEVYEVLGDDDFDGI 1014
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.137 0.435
Gapped
Lambda K H
0.267 0.0494 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,508,737
Number of extensions: 260760
Number of successful extensions: 2158
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1111
Number of HSP's successfully gapped: 290
Length of query: 295
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 202
Effective length of database: 4,105,140
Effective search space: 829238280
Effective search space used: 829238280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.3 bits)