Query psy13779
Match_columns 692
No_of_seqs 471 out of 1167
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 20:17:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13779.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13779hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 2E-63 6.7E-68 546.5 42.8 398 174-691 12-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 8.9E-37 3E-41 335.9 22.1 336 236-683 28-391 (409)
3 3e6u_A LANC-like protein 1; al 100.0 7.3E-30 2.5E-34 279.9 13.8 130 1-134 282-411 (411)
4 2g0d_A Nisin biosynthesis prot 99.9 6.6E-23 2.3E-27 225.2 10.3 126 2-129 273-399 (409)
5 3pmm_A Putative cytoplasmic pr 98.3 4.4E-05 1.5E-09 82.2 20.1 78 5-88 67-144 (382)
6 1nc5_A Hypothetical protein YT 97.8 0.00093 3.2E-08 71.7 20.8 78 6-88 41-121 (373)
7 2gz6_A N-acetyl-D-glucosamine 97.8 0.0021 7.2E-08 69.0 23.6 77 13-90 58-151 (388)
8 3pmm_A Putative cytoplasmic pr 97.8 0.00059 2E-08 73.4 18.3 237 342-603 73-331 (382)
9 2zzr_A Unsaturated glucuronyl 97.7 0.00013 4.5E-09 78.5 11.2 104 14-119 179-319 (397)
10 2gz6_A N-acetyl-D-glucosamine 97.6 0.0016 5.4E-08 70.0 18.8 239 404-649 56-338 (388)
11 3k7x_A LIN0763 protein; Q92DQ0 97.5 0.0052 1.8E-07 65.1 20.4 77 12-90 50-129 (349)
12 2ahf_A Unsaturated glucuronyl 97.5 0.024 8.1E-07 60.6 24.9 235 245-487 43-314 (377)
13 2ahf_A Unsaturated glucuronyl 97.4 0.0022 7.5E-08 68.6 15.9 242 340-603 44-319 (377)
14 2zzr_A Unsaturated glucuronyl 97.4 0.0015 5E-08 70.3 14.3 210 454-680 66-319 (397)
15 3k11_A Putative glycosyl hydro 97.1 0.0079 2.7E-07 65.5 16.3 254 339-603 84-363 (445)
16 1fp3_A N-acyl-D-glucosamine 2- 97.1 0.00085 2.9E-08 72.6 8.5 81 10-90 245-350 (402)
17 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.0033 1.1E-07 66.6 11.7 177 461-650 49-248 (349)
18 3k11_A Putative glycosyl hydro 97.0 0.015 5.1E-07 63.3 16.6 86 3-90 79-181 (445)
19 1fp3_A N-acyl-D-glucosamine 2- 96.9 0.015 5.1E-07 62.7 15.5 76 14-89 62-157 (402)
20 3gt5_A N-acetylglucosamine 2-e 96.6 0.0091 3.1E-07 64.5 11.1 244 405-649 56-344 (402)
21 1nc5_A Hypothetical protein YT 96.5 0.031 1.1E-06 59.7 14.4 229 407-649 47-313 (373)
22 2zbl_A Putative isomerase; N-a 96.0 0.036 1.2E-06 60.2 12.2 239 406-649 56-350 (421)
23 3h7l_A Endoglucanase; dehydrog 95.6 0.089 3.1E-06 59.0 13.4 77 9-90 251-339 (586)
24 3gt5_A N-acetylglucosamine 2-e 94.9 0.028 9.5E-07 60.7 6.3 80 10-89 246-345 (402)
25 2zbl_A Putative isomerase; N-a 94.8 0.056 1.9E-06 58.6 8.3 81 10-90 245-352 (421)
26 1clc_A Endoglucanase CELD; EC: 94.3 1.6 5.6E-05 49.6 19.1 73 12-84 291-378 (639)
27 1ks8_A Endo-B-1,4-glucanase; c 93.6 2.3 8E-05 46.0 18.1 72 13-86 155-242 (433)
28 3gzk_A Cellulase; fold from GH 87.9 1.1 3.8E-05 49.9 8.5 72 13-84 248-334 (537)
29 1tf4_A T. fusca endo/EXO-cellu 87.3 2 6.9E-05 48.5 10.3 72 13-84 156-241 (605)
30 1g87_A Endocellulase 9G; endog 85.8 2.3 7.7E-05 48.2 9.6 71 13-84 156-239 (614)
31 2xfg_A Endoglucanase 1; hydrol 85.3 2.6 8.9E-05 46.0 9.5 72 12-83 176-260 (466)
32 1gxm_A Pectate lyase; mechanis 85.1 3.7 0.00013 42.3 10.0 134 513-649 75-248 (332)
33 1r76_A Pectate lyase; A-helica 84.6 7.1 0.00024 41.5 12.1 135 514-649 151-325 (408)
34 1ia6_A Cellulase CEL9M; cellul 84.1 1.4 4.8E-05 47.8 6.7 72 12-83 157-237 (441)
35 3h7l_A Endoglucanase; dehydrog 79.2 59 0.002 36.3 17.6 182 248-434 255-483 (586)
36 2yik_A Endoglucanase; hydrolas 74.9 5.8 0.0002 44.8 8.1 69 13-83 222-306 (611)
37 1ut9_A Cellulose 1,4-beta-cell 73.3 5.5 0.00019 45.0 7.4 69 13-83 293-381 (609)
38 1nxc_A Mannosyl-oligosaccharid 63.0 15 0.00052 40.0 7.9 75 14-88 111-207 (478)
39 1nxc_A Mannosyl-oligosaccharid 59.3 6.5 0.00022 42.9 4.1 38 62-99 113-150 (478)
40 1r76_A Pectate lyase; A-helica 57.1 54 0.0018 34.8 10.6 42 402-443 150-195 (408)
41 1gxm_A Pectate lyase; mechanis 54.4 38 0.0013 34.9 8.6 143 402-599 75-244 (332)
42 1x9d_A Endoplasmic reticulum m 48.6 29 0.00099 38.3 7.1 75 14-88 175-269 (538)
43 1x9d_A Endoplasmic reticulum m 46.6 13 0.00044 41.1 3.9 42 62-103 177-218 (538)
44 1wzz_A Probable endoglucanase; 43.0 54 0.0018 33.8 7.8 76 13-88 111-202 (334)
45 2v8i_A Pectate lyase; periplas 37.1 79 0.0027 33.9 7.8 74 13-88 378-460 (543)
46 1dl2_A Class I alpha-1,2-manno 35.7 20 0.00069 39.3 3.3 38 62-99 107-151 (511)
47 1v5d_A Chitosanase; chitosan d 35.0 60 0.0021 34.2 6.8 72 13-86 140-228 (386)
48 1dl2_A Class I alpha-1,2-manno 33.8 2.5E+02 0.0084 30.7 11.6 115 530-645 124-269 (511)
49 1hcu_A Alpha-1,2-mannosidase; 32.4 25 0.00085 38.6 3.3 38 62-99 108-157 (503)
50 1w6k_A Lanosterol synthase; cy 32.1 6.1E+02 0.021 28.8 19.3 41 515-555 535-579 (732)
51 2ri9_A Mannosyl-oligosaccharid 31.3 33 0.0011 37.3 4.1 37 62-98 95-143 (475)
52 2ri9_A Mannosyl-oligosaccharid 29.4 96 0.0033 33.6 7.4 73 16-88 95-196 (475)
53 1hcu_A Alpha-1,2-mannosidase; 27.0 79 0.0027 34.6 6.2 74 15-88 107-210 (503)
54 1ks8_A Endo-B-1,4-glucanase; c 26.3 5.3E+02 0.018 27.3 12.5 68 206-274 170-241 (433)
55 2sqc_A Squalene-hopene cyclase 23.9 3.5E+02 0.012 30.3 11.0 24 534-557 59-82 (631)
56 3e7j_A Heparinase II protein; 23.1 1.3E+02 0.0043 34.7 7.2 82 549-638 224-313 (749)
57 1wzz_A Probable endoglucanase; 22.2 1.3E+02 0.0043 31.0 6.3 78 570-647 107-200 (334)
58 1kwf_A Endoglucanase A; hydrol 20.6 2.3E+02 0.008 29.3 8.1 73 13-86 125-212 (363)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=2e-63 Score=546.46 Aligned_cols=398 Identities=38% Similarity=0.742 Sum_probs=347.0
Q ss_pred cccCCCCCCCCCCCCCCcccccccccccccccCchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccHHHHHHHH
Q psy13779 174 KHSSRHHQNKYKYGEGEKSKLFTVENKEKIVLHPSFETKVWATLTRLIEDIDSEYETSDKFRDHDYSVYVGTSGQAMFYY 253 (692)
Q Consensus 174 ~~~~r~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sLY~G~aGIal~l~ 253 (692)
-|++|||+|||+||+++.....+ +.+| +++++|++++++++++++++|++++++.+ +.+.++|+|.+||++||+
T Consensus 12 ~~~~r~~~n~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~~~~~---~~~~~lY~G~~Gia~~l~ 85 (411)
T 3e6u_A 12 FMAQRAFPNPYADYNKSLAEGYF--DAAG-RLTPEFSQRLTNKIRELLQQMERGLKSAD---PRDGTGYTGWAGIAVLYL 85 (411)
T ss_dssp CGGGGBCCCCSCCCCHHHHHTTB--CTTC-CBCHHHHHHHHHHHHHHHHHHHHHTTTSC---TTCCCSSSSHHHHHHHHH
T ss_pred cccCccCCCCCCccccccccccc--cccc-cccHHHHHHHHHHHHHHHHHHHhhcccCC---CCCCCeeeChHHHHHHHH
Confidence 57899999999999976554433 5555 79999999999999999999999887754 899999999999999999
Q ss_pred HHHhccCChHHHHHHHHHHHHHHHhhccCCcccccCChHHHHHHHHHHHHhCChHHHHHHHHHHHhhhhhhhcCCCCCCc
Q psy13779 254 IYYQRTHDSKYLDKAQKLIERSLKNLKNRRFSFLNGDAGPIAVSALIYKALGKQEKLESSVQKLKALAPHLVDLRSDIPD 333 (692)
Q Consensus 254 ~L~~~t~~~~yl~~A~~~i~~~l~~~~~~~~s~~~G~aGi~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 333 (692)
+++++++|++|++.|.++++.+.+.++.+.++|++|.+|++++++++|+.+++++..+++++++.+... .+.+.++
T Consensus 86 ~l~~~t~d~~yl~~a~~~l~~~~~~l~~~~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~~----~~~~~~~ 161 (411)
T 3e6u_A 86 HLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLNK----IDPHAPN 161 (411)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHTTCCSCCCCTTTSTHHHHHHHHHHHHHTTCHHHHHHHHHHHHGGGG----GCTTCCS
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcccCCccccCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc----ccccCCh
Confidence 999999999999999999999988887778999999999999999999999998877777777665541 2345679
Q ss_pred ccccCchHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhhhhhhhhhc--CCCCcchhcccccccCCccchhHHHHHHH
Q psy13779 334 EILYGRAGYLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLSARKK--SRVPLEYEWHDKNYYGAAHGVTGILFTLL 411 (692)
Q Consensus 334 dll~G~AG~l~~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~~~~~~~--~~~pL~~~w~~~~~lG~ahG~aGIl~~Ll 411 (692)
|+++|+||++++|+.+++.++++.+.+..+.++++.|++.++...+... ...|+||+|++..++|++||.+||+++|+
T Consensus 162 dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll 241 (411)
T 3e6u_A 162 EMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLM 241 (411)
T ss_dssp STTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHT
T ss_pred hhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHHH
Confidence 9999999999999999999999988877788999999998876544332 35789999987777777777777777776
Q ss_pred hhcccCchhHhhhHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHhhcCcHHHHHHHHhccCCCc
Q psy13779 412 KSNVLTDKERDTLVKPTLDALLHETFPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKKYLDALLKSSDNFV 491 (692)
Q Consensus 412 ~l~~~~~~~~~~~i~~~i~~l~~~~~~~~n~~~~~~~~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l~~~~~~~~~~~ 491 (692)
.+++.+
T Consensus 242 ~~~~~~-------------------------------------------------------------------------- 247 (411)
T 3e6u_A 242 QPSLQV-------------------------------------------------------------------------- 247 (411)
T ss_dssp CGGGCC--------------------------------------------------------------------------
T ss_pred HHHhhc--------------------------------------------------------------------------
Confidence 653322
Q ss_pred ccccCcccccccCCCccCcccchhHHHHHHHHcccCChHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccccCCc
Q psy13779 492 SWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVLTDKERDTLVKPTLDALLDETFPSGNLKSSHGSDSDRLVQWCHGS 571 (692)
Q Consensus 492 ~w~~~~~~~~~~~~~~~G~~HG~sGI~~~Ll~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~w~~~~~~~~~~~~~wCHG~ 571 (692)
.++++.+.|+++++++.+.+.++||||+.++++.+.+++||||+
T Consensus 248 ------------------------------------~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~ 291 (411)
T 3e6u_A 248 ------------------------------------SQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGA 291 (411)
T ss_dssp ------------------------------------CHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSH
T ss_pred ------------------------------------ChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCCc
Confidence 12356778999999999988888999987766666789999999
Q ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCCCCCCccccchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcc
Q psy13779 572 PGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYN 651 (692)
Q Consensus 572 ~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~~~~~gLChG~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~~~ 651 (692)
+||+.+++.++++++|+++++.+.++++.+|++|++.+++|||||.+|++++|+++++.|++++|+++|.++++++.++.
T Consensus 292 ~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~ 371 (411)
T 3e6u_A 292 PGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYG 371 (411)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999997668999999999999999999999999999999999999998776
Q ss_pred CCCCCCCCCCCccccchHHHHHHHHHhhCCCCCCCCCccC
Q psy13779 652 KHEDTTPDRPYSLYEGKVGVAFFLLDILKPTNAKFPGYED 691 (692)
Q Consensus 652 ~~~~~~p~~~~sL~~G~AGi~~~Ll~l~~p~~~~fp~~~~ 691 (692)
.+.+++|+.++|||+|+|||+++|+|+.+|++++||+||+
T Consensus 372 ~~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 372 EHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp SSCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred cccCCCCCCCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 6677889999999999999999999999999999999985
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=100.00 E-value=8.9e-37 Score=335.85 Aligned_cols=336 Identities=16% Similarity=0.146 Sum_probs=239.2
Q ss_pred CCCCccccccHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHhhc---cCCcccccCChHHHHHHHHHHHHhCChHHHHH
Q psy13779 236 DHDYSVYVGTSGQAMFYYIYYQRTHDSKYLDKAQKLIERSLKNLK---NRRFSFLNGDAGPIAVSALIYKALGKQEKLES 312 (692)
Q Consensus 236 ~~~~sLY~G~aGIal~l~~L~~~t~~~~yl~~A~~~i~~~l~~~~---~~~~s~~~G~aGi~~~~~~l~~~~~~~~~~~~ 312 (692)
..+.+||+|.+||++|+.++++++++++|.+.|+++++++.+.++ ...+|+++|.+|+++++..+++..+ ..++
T Consensus 28 ~~~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~gl~~G~aGi~~~l~~l~~~~~---~~~~ 104 (409)
T 2g0d_A 28 FGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDE---KYKN 104 (409)
T ss_dssp GGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTSHHHHHHHHGGGTTTCH---HHHH
T ss_pred CCCCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHhCCCCCCcccccHHHHHHHHHHHHhccc---hHHH
Confidence 468999999999999999999999999999999999999877665 3578999999999998877754322 2233
Q ss_pred HHHHHHhhhhh----hhc-C----CCCCCcccccCchHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhhhhhhhhhcC
Q psy13779 313 SVQKLKALAPH----LVD-L----RSDIPDEILYGRAGYLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLSARKKS 383 (692)
Q Consensus 313 ~l~~~~~~~~~----~~~-~----~~~~~~dll~G~AG~l~~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~~~~~~~~ 383 (692)
.++++.+.+.. .++ . ....+.|+++|.||++++|+.++ ++... +.++++++.|++..+ +.
T Consensus 105 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~dl~~G~aGi~~~Ll~l~----~~~~~-~~~~~~~~~l~~~~~----~~-- 173 (409)
T 2g0d_A 105 LLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLIN----DEQYD-DLKILIINFLSNLTK----EN-- 173 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCC----CGGGH-HHHHHHHHHHHHTTS----CC--
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCcccccHhcCHHHHHHHHHHcc----CchhH-HHHHHHHHHHHHHHh----cC--
Confidence 33333322211 111 1 12336799999999999999885 23333 567788888887532 00
Q ss_pred CCCcchhcccccccCCccchhHHHHHHHhhcccCchhHhhhHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCchhH
Q psy13779 384 RVPLEYEWHDKNYYGAAHGVTGILFTLLKSNVLTDKERDTLVKPTLDALLHETFPSGNLKSSHGSDSDRLVQWCHGSPGF 463 (692)
Q Consensus 384 ~~pL~~~w~~~~~lG~ahG~aGIl~~Ll~l~~~~~~~~~~~i~~~i~~l~~~~~~~~n~~~~~~~~~~~~~d~~~G~aGi 463 (692)
.+.+ .|..... .+....+ ..
T Consensus 174 -~~~~-~w~~~~~-----------------~~~~~~~-------------~~---------------------------- 193 (409)
T 2g0d_A 174 -NGLI-SLYIKSE-----------------NQMSQSE-------------SE---------------------------- 193 (409)
T ss_dssp -SSSC-TTCBCGG-----------------GSSSHHH-------------HH----------------------------
T ss_pred -CCCC-ceeecCC-----------------ccccchh-------------hh----------------------------
Confidence 0000 0110000 0000000 00
Q ss_pred HHHHHHHHhhcCcHHHHHHHHhccCCCcccccCcccccccCCCccCcccchhHHHHHHHHcccCC--hHHHHHHHHHHHH
Q psy13779 464 TSLLQVAYETYNDKKYLDALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVLT--DKERDTLVKPTLD 541 (692)
Q Consensus 464 i~~Ll~ly~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~G~~HG~sGI~~~Ll~~~~~~--~~~~~~~i~~~l~ 541 (692)
.| .....++|||||++||+++|.+.+... ++.+.+.++++++
T Consensus 194 ----------------------------~~--------~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~ 237 (409)
T 2g0d_A 194 ----------------------------MY--------PLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIF 237 (409)
T ss_dssp ----------------------------HC--------TTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred ----------------------------cC--------CCCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHH
Confidence 00 012356789999999998887776543 4678899999999
Q ss_pred HHHHhcCC--CCC-CCC-CCC----------CCCCccccccCCchHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCC
Q psy13779 542 ALLDETFP--SGN-LKS-SHG----------SDSDRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLL 607 (692)
Q Consensus 542 ~l~~~~~~--~g~-w~~-~~~----------~~~~~~~~wCHG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~ 607 (692)
++.+..+. +++ ||+ .+. ...+..++||||++||+++++.+++.++|+++++.+.++++.+|+++..
T Consensus 238 ~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~~ 317 (409)
T 2g0d_A 238 IYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLG 317 (409)
T ss_dssp HHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccC
Confidence 99887663 577 987 221 1134578999999999999999999999999999999999999986433
Q ss_pred CCCCccccchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccchHHHHHHHHHhhCCCC
Q psy13779 608 RKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTN 683 (692)
Q Consensus 608 ~~~~gLChG~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~~~~~~~~~p~~~~sL~~G~AGi~~~Ll~l~~p~~ 683 (692)
.++++||||.+|++++|+++++.+++++|++++.++.....+.+ .....+ .++|||+|+|||+++|+++.+|++
T Consensus 318 ~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~~~~~~~~~-g~~~~~-~~~gL~~G~AGi~~~Ll~l~~p~~ 391 (409)
T 2g0d_A 318 IDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQIL-EEYGDE-SGTGFLEGISGCILVLSKFEYSIN 391 (409)
T ss_dssp CCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHH-HSCCST-TCSSTTTSHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHcCCcchhhc-cccCCC-CCCceeCCHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999987522111100 112233 345999999999999999999987
No 3
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.96 E-value=7.3e-30 Score=279.91 Aligned_cols=130 Identities=49% Similarity=0.992 Sum_probs=124.0
Q ss_pred CCccccccCchhHHHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCcccccccchHHHHHHHHhhcCchhHHHHHH
Q psy13779 1 DRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRAL 80 (692)
Q Consensus 1 ~~l~~wchgapg~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~ag~~~~~l~~~~~t~~~~~l~ra~ 80 (692)
|++|+||||+||++.++..|++++++++|++.|.++++.+|++|+++|++|||||+|||+++|+++|+.|+|++|++||.
T Consensus 282 ~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~ 361 (411)
T 3e6u_A 282 DLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRAC 361 (411)
T ss_dssp CCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCCCccccchHHHHHHHHhhcCCCcccccccCCCccH
Q psy13779 81 CFANWVTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINI 134 (692)
Q Consensus 81 ~~a~~~~~~~~~~~~~~~~p~sl~eG~~G~~~~l~~~~~~~~~~~~~~~~~~~~ 134 (692)
++++++..+.+..+++||+|+|||||+||++|+|.|+++|++| +||.+++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~----~fp~~~~ 411 (411)
T 3e6u_A 362 KFAEWCLEYGEHGCRTPDTPFSLFEGMAGTIYFLADLLVPTKA----RFPAFEL 411 (411)
T ss_dssp HHHHHHTTTTSSCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGC----CCTTTCC
T ss_pred HHHHHHHHhccccCCCCCCCChhhccHHHHHHHHHHHcCCCcc----cCCCCCC
Confidence 9999998876667889999999999999999999999999999 6798874
No 4
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.87 E-value=6.6e-23 Score=225.20 Aligned_cols=126 Identities=18% Similarity=0.211 Sum_probs=110.8
Q ss_pred CccccccCchhHHHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCcccccccchHHHHHHHHhhcCchhHHHHHHH
Q psy13779 2 RLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALC 81 (692)
Q Consensus 2 ~l~~wchgapg~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~ag~~~~~l~~~~~t~~~~~l~ra~~ 81 (692)
.+++||||+||+++++.+|+++++||+|++.|.++.+.+|+++...++++||||+|||+++|+.+|+.|+|++|+++|.+
T Consensus 273 ~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~ 352 (409)
T 2g0d_A 273 IRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEE 352 (409)
T ss_dssp CCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred CCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999977789999999999999999999999999999999998
Q ss_pred HHHHhhcCCCCCCCCCCCCCccccchHHHHHHHHhhcCCCc-ccccccC
Q psy13779 82 FANWVTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTN-AKWNQEY 129 (692)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~p~sl~eG~~G~~~~l~~~~~~~~-~~~~~~~ 129 (692)
|.......+ ...+.+++| |||+|.||++++|.++..|++ ..|..-|
T Consensus 353 ~~~~~~~~~-g~~~~~~~~-gL~~G~AGi~~~Ll~l~~p~~~~~W~~~l 399 (409)
T 2g0d_A 353 FNVNSEQIL-EEYGDESGT-GFLEGISGCILVLSKFEYSINFTYWRQAL 399 (409)
T ss_dssp HHHTHHHHH-HSCCSTTCS-STTTSHHHHHHHHHHHHSCCCSSCGGGGG
T ss_pred cCCcchhhc-cccCCCCCC-ceeCCHHHHHHHHHHhcCCCCCCChHHHH
Confidence 643321100 124678999 999999999999999999987 7786543
No 5
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.25 E-value=4.4e-05 Score=82.21 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=63.2
Q ss_pred ccccCchhHHHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCcccccccchHHHHHHHHhhcCchhHHHHHHHHHH
Q psy13779 5 QWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFAN 84 (692)
Q Consensus 5 ~wchgapg~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~ag~~~~~l~~~~~t~~~~~l~ra~~~a~ 84 (692)
.||||- ++..|.++|++++|++|++.|.+..+..++.|. +...|=....+.+++.+|++|||++|+..|.+.|+
T Consensus 67 ~Wt~G~--~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~----~~~n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad 140 (382)
T 3pmm_A 67 EWTHGV--GLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGA----TTKNVNTMAPFLTLAYRFEETGRMAYLPWLESWAE 140 (382)
T ss_dssp SHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC----CCCCTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHH
T ss_pred cccHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCC----CcCcccchHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 588885 678889999999999999999998887777642 22234333445688999999999999999999999
Q ss_pred Hhhc
Q psy13779 85 WVTG 88 (692)
Q Consensus 85 ~~~~ 88 (692)
++..
T Consensus 141 ~L~~ 144 (382)
T 3pmm_A 141 WAMH 144 (382)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
No 6
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.85 E-value=0.00093 Score=71.67 Aligned_cols=78 Identities=18% Similarity=0.216 Sum_probs=58.8
Q ss_pred cccCchhHHHHHHHHHHHcCCHHHHHHHHHhhHHHHHh-ccc--ccCCcccccccchHHHHHHHHhhcCchhHHHHHHHH
Q psy13779 6 WCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHA-GLL--RKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCF 82 (692)
Q Consensus 6 wchgapg~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~-g~l--~kg~~lchG~ag~~~~~l~~~~~t~~~~~l~ra~~~ 82 (692)
||+| -++..|..++++++|++|++.|+++++.+..+ |-+ +.|. +-|=. .|.+++.||+.|+|++|+..|.+.
T Consensus 41 w~~G--~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l~~~~~~-lDd~~--~g~~ll~lY~~Tgd~~yl~~a~~l 115 (373)
T 1nc5_A 41 YHQG--VFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDE-LDAIQ--AGLILFPLYEQTKDERYVKAAKRL 115 (373)
T ss_dssp HHHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTC-GGGTG--GGGGHHHHHHHHCCHHHHHHHHHH
T ss_pred hhHH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcccCCCCC-cchHH--HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4554 23567899999999999999999999987653 322 2222 32222 456889999999999999999999
Q ss_pred HHHhhc
Q psy13779 83 ANWVTG 88 (692)
Q Consensus 83 a~~~~~ 88 (692)
++++..
T Consensus 116 a~~l~~ 121 (373)
T 1nc5_A 116 RSLYGT 121 (373)
T ss_dssp HGGGGT
T ss_pred HHHHHh
Confidence 998853
No 7
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.84 E-value=0.0021 Score=69.00 Aligned_cols=77 Identities=10% Similarity=0.012 Sum_probs=58.1
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHhhHHHHHhcccccCCcccccc-------------cchHH---HHHHHHhhcCchhH
Q psy13779 13 FISLLQVAYET-YNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGV-------------AGNAY---AFLTAYHTTHAEEQ 75 (692)
Q Consensus 13 ~~~~~~~a~~~-~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~-------------ag~~~---~~l~~~~~t~~~~~ 75 (692)
++.+++.|+++ +++|+|++.|.++.+-+-+.-. .+..|++|-+ -+||+ ++..+|+.|||++|
T Consensus 58 ~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~-~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~ 136 (388)
T 2gz6_A 58 QVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGR-DDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWA 136 (388)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSB-CTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHH
Confidence 56788999999 8999999999999988766532 2223555443 23444 34457999999999
Q ss_pred HHHHHHHHHHhhcCC
Q psy13779 76 MYRALCFANWVTGYN 90 (692)
Q Consensus 76 l~ra~~~a~~~~~~~ 90 (692)
+..|.+.++++....
T Consensus 137 l~~A~~~~~~i~~~~ 151 (388)
T 2gz6_A 137 KDVAMQAYNNVLRRK 151 (388)
T ss_dssp HHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 8
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.81 E-value=0.00059 Score=73.37 Aligned_cols=237 Identities=13% Similarity=0.054 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHhhhhhhhhhcCCCCcchhcccccccCCccchhHHHHHHHhhcccCchh-
Q psy13779 342 YLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLSARKKSRVPLEYEWHDKNYYGAAHGVTGILFTLLKSNVLTDKE- 420 (692)
Q Consensus 342 ~l~~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~~~~~~~~~~pL~~~w~~~~~lG~ahG~aGIl~~Ll~l~~~~~~~- 420 (692)
.+.++..+++.++|++|. +.+++..+.+++... ++. ++ -.+..+ .+++.+|+.++++
T Consensus 73 ~~~gl~~~ye~Tgd~~y~-~~a~~~~~~~~~~~~----------~~~-------n~--D~~~~~--~~l~~lY~~Tgd~~ 130 (382)
T 3pmm_A 73 GLYGIYQYYQQTGDIEMR-DIIDRWFADRFAEGA----------TTK-------NV--NTMAPF--LTLAYRFEETGRMA 130 (382)
T ss_dssp HHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHCC----------CCC-------CT--TTTTTH--HHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHCCHHHH-HHHHHHHHHHHcCCC----------CcC-------cc--cchHHH--HHHHHHHHHhCCHH
Confidence 566788889999999887 456666655443210 110 11 123333 4668888888665
Q ss_pred HhhhHHHHHHHHhhcc--CCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHhhcCcHHHHHHHHhcc--------CCC
Q psy13779 421 RDTLVKPTLDALLHET--FPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKKYLDALLKSS--------DNF 490 (692)
Q Consensus 421 ~~~~i~~~i~~l~~~~--~~~~n~~~~~~~~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l~~~~~~~--------~~~ 490 (692)
+++.+....+.+.+.. .+.|.+-..........--|+.|..-.+..+..+++.++++++++.+.+.. +..
T Consensus 131 Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~ 210 (382)
T 3pmm_A 131 YLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRE 210 (382)
T ss_dssp GHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTT
T ss_pred HHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCC
Confidence 7888888888876532 123332110000111223466776667778889999999999999876532 111
Q ss_pred -cccccCcccccccCCCccCcccchhHHHHHHHHcccC-------Ch-HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q psy13779 491 -VSWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVL-------TD-KERDTLVKPTLDALLDETFPSGNLKSSHGSDS 561 (692)
Q Consensus 491 -~~w~~~~~~~~~~~~~~~G~~HG~sGI~~~Ll~~~~~-------~~-~~~~~~i~~~l~~l~~~~~~~g~w~~~~~~~~ 561 (692)
..|...-...........-|+.|.+=.++++...++. +. +++.+.+++.++++.+.+.++|.|...+.+..
T Consensus 211 tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d~~~ 290 (382)
T 3pmm_A 211 TGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPH 290 (382)
T ss_dssp TSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTSCEESBTTCTT
T ss_pred CCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCCChhhccCCCC
Confidence 1111100000001123566999988888887777653 12 25888999999999999877898976543321
Q ss_pred CccccccCCchHHHHHHHHHHH--hcCCHHHHHHHHHHhHHHHH
Q psy13779 562 DRLVQWCHGSPGFISLLQVAYE--TYNDKKYLDALLKSSDNVWH 603 (692)
Q Consensus 562 ~~~~~wCHG~~Gi~~~l~~~~~--~~~d~~~~~~a~~~~~~i~~ 603 (692)
+.-=.-|++.++.++++..+ .+ +++|.+.|+++.+.+.+
T Consensus 291 --~y~EsSatA~~ay~ll~~~~~g~l-~~~Y~~~a~ka~~~l~~ 331 (382)
T 3pmm_A 291 --SYLEASATAGFAYGILKAVRKRYV-GQHYAGVAEKAIRGIVQ 331 (382)
T ss_dssp --SCEEHHHHHHHHHHHHHHHHTTSS-CGGGHHHHHHHHHHHHH
T ss_pred --CCccccHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHh
Confidence 11122356777778888887 34 46799999988877654
No 9
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.71 E-value=0.00013 Score=78.47 Aligned_cols=104 Identities=19% Similarity=0.192 Sum_probs=74.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCcccccc----------------------------cchHHHHHH
Q psy13779 14 ISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGV----------------------------AGNAYAFLT 65 (692)
Q Consensus 14 ~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~----------------------------ag~~~~~l~ 65 (692)
+.+|+.|+++++||+|++.|+++++.+.+.- .+...+++|=+ |--.|+|+.
T Consensus 179 i~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~-~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~ 257 (397)
T 2zzr_A 179 IQLLFFAYEQTGDEKYRQVAVNHFYASANNV-VRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPL 257 (397)
T ss_dssp THHHHHHHHHHCCHHHHHHHHHHHHHHHHHT-BCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC-cCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHH
Confidence 3689999999999999999999999887763 22222333322 334688899
Q ss_pred HHhhcCchhHHHHHHHHHHHhhcCCCCC------CC---CCCCCCccccchHHHHHHHHhhcC
Q psy13779 66 AYHTTHAEEQMYRALCFANWVTGYNKHE------DT---TPDRPYSLYEGKVGVAFFLLDILK 119 (692)
Q Consensus 66 ~~~~t~~~~~l~ra~~~a~~~~~~~~~~------~~---~~~~p~sl~eG~~G~~~~l~~~~~ 119 (692)
+|+.|+|++||..|.++++++...++.. .. .|.+|.. -.|.|.++|.|..+..
T Consensus 258 lY~~T~d~~yL~~A~~la~~~l~~~~~d~~pywdt~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 258 SYRKMKDYQQIILFKGMTNYFLNRLPEDKVSYWDLIFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCBSBTTCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHhhHHhCCccccCCCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 9999999999999999999988765321 11 2334433 4566777788877755
No 10
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.65 E-value=0.0016 Score=69.98 Aligned_cols=239 Identities=9% Similarity=-0.026 Sum_probs=139.6
Q ss_pred hHHHHHHHhhccc-Cc-hhHhhhHHHHHHHHhhccC-CCCCCCCCCCCCC-C-cccccccCchhHHHHHHHHHhhcCcHH
Q psy13779 404 TGILFTLLKSNVL-TD-KERDTLVKPTLDALLHETF-PSGNLKSSHGSDS-D-RLVQWCHGSPGFTSLLQVAYETYNDKK 478 (692)
Q Consensus 404 aGIl~~Ll~l~~~-~~-~~~~~~i~~~i~~l~~~~~-~~~n~~~~~~~~~-~-~~~d~~~G~aGii~~Ll~ly~~~~~~~ 478 (692)
+=+++++...++. ++ +.+.+.+++.++.+.+... +.|.+-.+..... . .....+.+.+=.+..+..+|+.+++++
T Consensus 56 ar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~ 135 (388)
T 2gz6_A 56 NRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEW 135 (388)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHH
Confidence 4566777777776 55 4478889999999888643 3444432211110 0 012233445556677788899999999
Q ss_pred HHHHHHhccCCCcccccCc-cc--ccccC-CCccCcccchhHHHHHHHHcccCChH-HHHHHHHHHHHHHHHhcCC--CC
Q psy13779 479 YLDALLKSSDNFVSWSFGE-CE--YEWHD-KNYYGAAHGVTGILFTLLKSNVLTDK-ERDTLVKPTLDALLDETFP--SG 551 (692)
Q Consensus 479 ~l~~~~~~~~~~~~w~~~~-~~--~~~~~-~~~~G~~HG~sGI~~~Ll~~~~~~~~-~~~~~i~~~l~~l~~~~~~--~g 551 (692)
+++.+.+..+........+ .. ..+.. ....+ .-+.+=.+.+++.+++++++ ++.+.++++++.+.+.... .|
T Consensus 136 ~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~-~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g 214 (388)
T 2gz6_A 136 AKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKA-LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQG 214 (388)
T ss_dssp HHHHHHHHHHHHHTC--------------CCCCEE-THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTT
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9998877543322111100 00 00000 01111 11112234457888888886 6889999999998875431 22
Q ss_pred --------CCCCCCCCCCCccccccCCchH----HHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCCCCCCccccch--
Q psy13779 552 --------NLKSSHGSDSDRLVQWCHGSPG----FISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGV-- 617 (692)
Q Consensus 552 --------~w~~~~~~~~~~~~~wCHG~~G----i~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~~~~~gLChG~-- 617 (692)
.|.. .+..... .=.|| .+.+++.++++++|++|++.|.++.+..++.|.-....+++|..
T Consensus 215 ~~~e~~~~~w~~-~~~~~~~-----~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~ 288 (388)
T 2gz6_A 215 LMYENVAPDGSH-IDCFEGR-----LINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMDA 288 (388)
T ss_dssp EECSEECTTSCC-CCSTTTT-----EECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEET
T ss_pred eEEEEECCCCCC-CCCcccC-----cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeecC
Confidence 2321 1000000 01344 34468888999999999999999988777665421113444321
Q ss_pred ------------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q psy13779 618 ------------------SGNAYAFLTAYHTTHAEEQMYRALCFANWVTG 649 (692)
Q Consensus 618 ------------------aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~ 649 (692)
+=.+..++.+|+.|+|++|++.+.++.+++.+
T Consensus 289 ~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~ 338 (388)
T 2gz6_A 289 AGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQ 338 (388)
T ss_dssp TSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 22356677889999999999999988776643
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.53 E-value=0.0052 Score=65.11 Aligned_cols=77 Identities=16% Similarity=0.014 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHhhHHHHHh--cccccCCcccccccchHHHHHHHHhhcCchhHHHHHHHHHHHh-hc
Q psy13779 12 GFISLLQVAYETYNDKKYLDALLKSSDNVWHA--GLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWV-TG 88 (692)
Q Consensus 12 g~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~--g~l~kg~~lchG~ag~~~~~l~~~~~t~~~~~l~ra~~~a~~~-~~ 88 (692)
|++-+|..|++.++|++|++.+.++.+.+-.+ |-+.. +.-|=.+=-+.+++.+|++|++++||.+|++.++++ ..
T Consensus 50 ~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~--~~~DD~a~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~ 127 (349)
T 3k7x_A 50 HLVEVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIH--DFYDDMLWNALAAYRLYKATGKSIYLEDAQLVWQDLVDT 127 (349)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCC--SBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCc--cCccHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHh
Confidence 56789999999999999999999988766544 22211 222333334679999999999999999999999988 54
Q ss_pred CC
Q psy13779 89 YN 90 (692)
Q Consensus 89 ~~ 90 (692)
.+
T Consensus 128 ~w 129 (349)
T 3k7x_A 128 GW 129 (349)
T ss_dssp TB
T ss_pred CC
Confidence 43
No 12
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.49 E-value=0.024 Score=60.56 Aligned_cols=235 Identities=10% Similarity=0.029 Sum_probs=137.0
Q ss_pred cHHHHH-HHHHHHhccCChHHHHHHHHHHHHHHHhhccCCcccccCChHHHH--HHHHHHHHhCChHHHHHHHHHHHhhh
Q psy13779 245 TSGQAM-FYYIYYQRTHDSKYLDKAQKLIERSLKNLKNRRFSFLNGDAGPIA--VSALIYKALGKQEKLESSVQKLKALA 321 (692)
Q Consensus 245 ~aGIal-~l~~L~~~t~~~~yl~~A~~~i~~~l~~~~~~~~s~~~G~aGi~~--~~~~l~~~~~~~~~~~~~l~~~~~~~ 321 (692)
++|+-. .++.+++.|+|++|++.|.+..++..+.+.. .+..-+-.-|.++ .+...|+.++|++..+..++-+..++
T Consensus 43 t~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~-~~~~~~HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~ 121 (377)
T 2ahf_A 43 TDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR-FENLDHHNIGFLYSLSAKAQWIVEKDESARKLALDAADVLM 121 (377)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTT-TTTCCBSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhc-ccCCCCCCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 456643 6788899999999999999988776654421 1111122345544 45667889999986665555555555
Q ss_pred hhhh------cC-CC---CC-Ccccc-cCchHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhhhhhh--------hhh
Q psy13779 322 PHLV------DL-RS---DI-PDEIL-YGRAGYLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLS--------ARK 381 (692)
Q Consensus 322 ~~~~------~~-~~---~~-~~dll-~G~AG~l~~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~~~--------~~~ 381 (692)
.... +. +. .. ...++ .-.. -+-+|...+++++|++|. +.+.+.++.+++....-. -+.
T Consensus 122 ~r~~~~~g~i~sw~~~~~~~~~~~~iID~mm-ni~~L~~A~~~~gd~~y~-~~A~~~a~~~l~~~~r~dgs~~h~~~~D~ 199 (377)
T 2ahf_A 122 RRWRADAGIIQAWGPKGDPENGGRIIIDCLL-NLPLLLWAGEQTGDPEYR-RVAEAHALKSRRFLVRGDDSSYHTFYFDP 199 (377)
T ss_dssp TTEETTTTEECCBSSTTCTTTTTEEEGGGGG-GHHHHHHHHHHHCCTHHH-HHHHHHHHHHHHHTBBTTSCBCSEEEECT
T ss_pred HhCCCCCCeEEeccCCCCCCCCceEEechHH-HHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHhCcCCCCCeEEEEEeeC
Confidence 4321 11 11 00 00122 2222 266888899999999887 455565666665432100 000
Q ss_pred cCCCCcchhcccccccC------CccchhHHHHHHHhhcccCch-hHhhhHHHHHHHHhhccCCCCC--CCCCCCCCCCc
Q psy13779 382 KSRVPLEYEWHDKNYYG------AAHGVTGILFTLLKSNVLTDK-ERDTLVKPTLDALLHETFPSGN--LKSSHGSDSDR 452 (692)
Q Consensus 382 ~~~~pL~~~w~~~~~lG------~ahG~aGIl~~Ll~l~~~~~~-~~~~~i~~~i~~l~~~~~~~~n--~~~~~~~~~~~ 452 (692)
....+. ++...-| .+.|.|-.++.+..+++.+.+ ++++..+++.+.+++....++- |.........
T Consensus 200 ~tG~~~----~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~~- 274 (377)
T 2ahf_A 200 ENGNAI----RGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPEDGVVYWDFEVPQEPS- 274 (377)
T ss_dssp TTCCEE----EEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCTT-
T ss_pred CCCCee----eCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhHHhCCcccccCCCccCC-
Confidence 011110 0001122 245679999999999998855 4888888888888875422221 2111110111
Q ss_pred ccccccCchhHHHHHHHHHhhcC-----cHHHHHHHHhcc
Q psy13779 453 LVQWCHGSPGFTSLLQVAYETYN-----DKKYLDALLKSS 487 (692)
Q Consensus 453 ~~d~~~G~aGii~~Ll~ly~~~~-----~~~~l~~~~~~~ 487 (692)
.+--.++.+..+..|+++.+.++ +++|.+.+.+..
T Consensus 275 ~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l 314 (377)
T 2ahf_A 275 SYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTV 314 (377)
T ss_dssp SCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHH
Confidence 11126788999999999999985 577888776643
No 13
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.43 E-value=0.0022 Score=68.60 Aligned_cols=242 Identities=12% Similarity=0.043 Sum_probs=140.1
Q ss_pred hHHHH-HHHHHHHHhccccchHHHHHHHHHHHHHhhhhhhhhhcCCCCcchhcccccccCCccchhHHHH--HHHhhccc
Q psy13779 340 AGYLY-SLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLSARKKSRVPLEYEWHDKNYYGAAHGVTGILF--TLLKSNVL 416 (692)
Q Consensus 340 AG~l~-~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~~~~~~~~~~pL~~~w~~~~~lG~ahG~aGIl~--~Ll~l~~~ 416 (692)
+|+-. .|..+++.++|++++ +.+++..+.+.+... + .+...|=-.|.++ .+...++.
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~-~~a~~~~~~l~~~~~---~----------------~~~~~~HD~Gf~~~~s~~~~y~l 103 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYR-EGAVRTVASFRERLD---R----------------FENLDHHNIGFLYSLSAKAQWIV 103 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHT---T----------------TTTCCBSTHHHHHHTTHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHhhh---c----------------ccCCCCCCchHhhHHHHHHHHHH
Confidence 45444 446667889998776 344444554443211 0 0111111234433 35556677
Q ss_pred Cchh-HhhhHHHHHHHHhhccCCCCCCCCCCCC---CCCcccccccCchhHHHHHHHHHhhcCcHHHHHHHHhccCCC--
Q psy13779 417 TDKE-RDTLVKPTLDALLHETFPSGNLKSSHGS---DSDRLVQWCHGSPGFTSLLQVAYETYNDKKYLDALLKSSDNF-- 490 (692)
Q Consensus 417 ~~~~-~~~~i~~~i~~l~~~~~~~~n~~~~~~~---~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l~~~~~~~~~~-- 490 (692)
++++ +++.+....+.++..-.+.+..-.+|.. +.....-++.-+.- +..|...++.+++++|++.+++.++..
T Consensus 104 tg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~mmn-i~~L~~A~~~~gd~~y~~~A~~~a~~~l~ 182 (377)
T 2ahf_A 104 EKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLN-LPLLLWAGEQTGDPEYRRVAEAHALKSRR 182 (377)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGGGG-HHHHHHHHHHHCCTHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6554 7888888888887754343221112221 11111122223333 667888899999999999877743211
Q ss_pred -------ccc---ccCc--ccc----cc-cCCCccCcccchhHHHHHHHHcccCChH-HHHHHHHHHHHHHHHhcCCCC-
Q psy13779 491 -------VSW---SFGE--CEY----EW-HDKNYYGAAHGVTGILFTLLKSNVLTDK-ERDTLVKPTLDALLDETFPSG- 551 (692)
Q Consensus 491 -------~~w---~~~~--~~~----~~-~~~~~~G~~HG~sGI~~~Ll~~~~~~~~-~~~~~i~~~l~~l~~~~~~~g- 551 (692)
..+ ..++ ... .. .......|++|.+-.+++++.+++.+.+ ++++.++++.+++++...+++
T Consensus 183 ~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~d~~ 262 (377)
T 2ahf_A 183 FLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPEDGV 262 (377)
T ss_dssp HTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCTTSS
T ss_pred hCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhHHhCC
Confidence 110 0000 000 00 1122367999999999999999998875 799999999999999753333
Q ss_pred -CCCCCCCCCCCccccccCCchHHHHHHHHHHHhcC-----CHHHHHHHHHHhHHHHH
Q psy13779 552 -NLKSSHGSDSDRLVQWCHGSPGFISLLQVAYETYN-----DKKYLDALLKSSDNVWH 603 (692)
Q Consensus 552 -~w~~~~~~~~~~~~~wCHG~~Gi~~~l~~~~~~~~-----d~~~~~~a~~~~~~i~~ 603 (692)
.|-...++. ...+-=-.++++.+..|+++.+.++ +++|.+.|+++++.+..
T Consensus 263 pywd~~~~~~-~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~ 319 (377)
T 2ahf_A 263 VYWDFEVPQE-PSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRD 319 (377)
T ss_dssp CBSBTTSCCC-TTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcc-CCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHH
Confidence 343221111 0011113566778888999999985 67899999998876654
No 14
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.42 E-value=0.0015 Score=70.34 Aligned_cols=210 Identities=18% Similarity=0.177 Sum_probs=127.0
Q ss_pred cccccCchhHHH-HHHHHHhhcCcHHHHHHHHhccCCCcccccCcccccccCCCccCcccchhHHHHH--HHHcccCChH
Q psy13779 454 VQWCHGSPGFTS-LLQVAYETYNDKKYLDALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVTGILFT--LLKSNVLTDK 530 (692)
Q Consensus 454 ~d~~~G~aGii~-~Ll~ly~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~G~~HG~sGI~~~--Ll~~~~~~~~ 530 (692)
.+|.+|- -. .|-.+|+.++++++++.+.+..+....... ......|=--|.++. +...++++++
T Consensus 66 ~~Wt~GF---~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~----------~~~~~~~HD~GF~~~~s~~~~y~ltg~ 132 (397)
T 2zzr_A 66 TEWTNGF---WTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRIN----------NRIALDHHDLGFLYTPSCTAEYRINGD 132 (397)
T ss_dssp CSSCHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH----------TTCSCCSSTHHHHHTTTHHHHHHHHCC
T ss_pred CccCcch---HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhh----------hcccCCCCCchHHHHHHHHHHHHHhCC
Confidence 3565554 33 334568899999999877653221100000 001111222343332 3344566664
Q ss_pred -HHHHHHHHHHHHHHHhcCCC-C---CCCCCCCCCCCccccccCCchHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcC
Q psy13779 531 -ERDTLVKPTLDALLDETFPS-G---NLKSSHGSDSDRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAG 605 (692)
Q Consensus 531 -~~~~~i~~~l~~l~~~~~~~-g---~w~~~~~~~~~~~~~wCHG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g 605 (692)
++++.+.++.+.+.....+. | .|... ++..+ ..-|--... ++.+|..++++++|++|.+.|.+.++.+.+.-
T Consensus 133 ~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~-~~~~~-~~~iID~~m-ni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~ 209 (397)
T 2zzr_A 133 VKALEATIKAADKLMERYQEKGGFIQAWGEL-GYKEH-YRLIIDCLL-NIQLLFFAYEQTGDEKYRQVAVNHFYASANNV 209 (397)
T ss_dssp HHHHHHHHHHHHHHHTTEETTTTEECCSSST-TCGGG-CEEETTHHH-HTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCEEEecccC-CCCCC-CceeechHh-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 78899999999998866443 2 24321 11111 111221122 45678888999999999999998877655432
Q ss_pred C------------------C---------CCCCccccchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhccCCCC---
Q psy13779 606 L------------------L---------RKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHED--- 655 (692)
Q Consensus 606 ~------------------~---------~~~~gLChG~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~~~~~~~--- 655 (692)
+ . ..+.++..|.|-.++.++.+|+.|+|++|++.|.++++++++.+....
T Consensus 210 ~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~py 289 (397)
T 2zzr_A 210 VRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVSY 289 (397)
T ss_dssp BCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCCB
T ss_pred cCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCcc
Confidence 1 0 022345567799999999999999999999999999998877542111
Q ss_pred ---C---CCCCCCccccchHHHHHHHHHhhC
Q psy13779 656 ---T---TPDRPYSLYEGKVGVAFFLLDILK 680 (692)
Q Consensus 656 ---~---~p~~~~sL~~G~AGi~~~Ll~l~~ 680 (692)
. .|.++.. -.|.|.+++.|+++..
T Consensus 290 wdt~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 290 WDLIFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp SBTTCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 1 1111112 3588888899988865
No 15
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.13 E-value=0.0079 Score=65.52 Aligned_cols=254 Identities=10% Similarity=0.012 Sum_probs=151.8
Q ss_pred chHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhhhh---hhhhhcC-CCCcchhcccccccCCccchhHHHHHHHhhc
Q psy13779 339 RAGYLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQN---LSARKKS-RVPLEYEWHDKNYYGAAHGVTGILFTLLKSN 414 (692)
Q Consensus 339 ~AG~l~~L~~l~~~~~d~~~~~~~i~~v~~~Il~~~~~---~~~~~~~-~~pL~~~w~~~~~lG~ahG~aGIl~~Ll~l~ 414 (692)
.+-.+.++..+++.++|++|. +.+++.++.|.+.... +.+.+.+ ..|.+.. ...+..+=.+.++++|+.++
T Consensus 84 ~Gv~l~gl~~ay~~Tgd~kY~-~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~----~~~~~LDD~g~~~~~Li~lY 158 (445)
T 3k11_A 84 WGVTYSALIAAAETTGDKRYT-DYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQI----LTPHALDDAGAVCTAMIKLR 158 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH----HSCCSGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHhccchhhhhhhccCCeecccccc----cCCCcchhHHHHHHHHHHHH
Confidence 355678889999999999987 5667666655543211 1111111 1111110 11333444577888999999
Q ss_pred ccCchh-HhhhHHHHHHHHhhcc--CCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHhhcCcHH--HHHHHHhcc--
Q psy13779 415 VLTDKE-RDTLVKPTLDALLHET--FPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKK--YLDALLKSS-- 487 (692)
Q Consensus 415 ~~~~~~-~~~~i~~~i~~l~~~~--~~~~n~~~~~~~~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~--~l~~~~~~~-- 487 (692)
+.++++ +++.+....+++++.. .++|.+- .......--|+.|+-=....+..+++.+++++ +++.+.+..
T Consensus 159 ~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~---h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~ 235 (445)
T 3k11_A 159 LKDESLPVDGLIQNYFDFIINKEYRLADGTFA---RNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQ 235 (445)
T ss_dssp HHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBC---BCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHcCCCCCCCcee---ecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHH
Confidence 888655 7888888889888754 2334332 11122234567777566778888899999999 998766532
Q ss_pred ------CCC-cccccCcccccccCCCccCcccchhHHHHHHHHcccC-----Ch-HHHHHHHHHHHHHHHHhcCCCCCCC
Q psy13779 488 ------DNF-VSWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVL-----TD-KERDTLVKPTLDALLDETFPSGNLK 554 (692)
Q Consensus 488 ------~~~-~~w~~~~~~~~~~~~~~~G~~HG~sGI~~~Ll~~~~~-----~~-~~~~~~i~~~l~~l~~~~~~~g~w~ 554 (692)
+.. ..|...-. .........-|+-|..=.++++...+.. +. +.+.+.+++.++.+.+.+.++|.|.
T Consensus 236 ~~~~l~D~~tGL~~Hg~~-~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~G~W~ 314 (445)
T 3k11_A 236 FADRMFIPEKGLYRHGWV-ESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGEGFWH 314 (445)
T ss_dssp HHHHHEETTTTEECSEEE-TTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTTSCEE
T ss_pred HHHhcccCCCCCEeeeec-CCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCCCchh
Confidence 111 01110000 0001122346777766666666665542 22 3688899999999999887789887
Q ss_pred CCCCCCCCccccccCCchHHHHHHHHHHHh--cCCHHHHHHHHHHhHHHHH
Q psy13779 555 SSHGSDSDRLVQWCHGSPGFISLLQVAYET--YNDKKYLDALLKSSDNVWH 603 (692)
Q Consensus 555 ~~~~~~~~~~~~wCHG~~Gi~~~l~~~~~~--~~d~~~~~~a~~~~~~i~~ 603 (692)
..+.+.. +.-=--|++.++.++++..+. ++.++|...|.++.+.+.+
T Consensus 315 ~vld~~~--~y~EsSaTAmfaygllkgvr~G~Ld~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 315 QLLDCND--SYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp SBTTCTT--SCEEHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHT
T ss_pred hccCCCC--CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 6443321 111123566777778777764 3335799999988876654
No 16
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.11 E-value=0.00085 Score=72.61 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=66.8
Q ss_pred chh----HHHHHHHHHHHcCCHHHHHHHHHhhHHH-HHhcccccCCccccccc--ch------------------HHHHH
Q psy13779 10 SPG----FISLLQVAYETYNDKKYLDALLKSSDNV-WHAGLLRKGYSLCHGVA--GN------------------AYAFL 64 (692)
Q Consensus 10 apg----~~~~~~~a~~~~~~~~~~~~~~~~~~~~-w~~g~l~kg~~lchG~a--g~------------------~~~~l 64 (692)
.|| .+-+|..|++++++|+|++.|+++++.+ ++.|.-.+..|++|-.. |. ..+++
T Consensus 245 ~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l 324 (402)
T 1fp3_A 245 NPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFL 324 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHH
Confidence 477 3337999999999999999999999999 99887655347887532 32 77899
Q ss_pred HHHhhcCchhHHHHHHHHHHHhhcCC
Q psy13779 65 TAYHTTHAEEQMYRALCFANWVTGYN 90 (692)
Q Consensus 65 ~~~~~t~~~~~l~ra~~~a~~~~~~~ 90 (692)
.||+.|||++|+..|.++++++...+
T Consensus 325 ~ly~~tgd~~yl~~a~~~~~~~~~~f 350 (402)
T 1fp3_A 325 MGYSESGDPALLRLFYQVAEYTFRQF 350 (402)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999986643
No 17
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.01 E-value=0.0033 Score=66.62 Aligned_cols=177 Identities=14% Similarity=-0.046 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHhhcCcHHHHHHHHhccCCCcccccCcccccccCCCccCcccchhHHHHHHHHcccCChH-HHHHHHHHH
Q psy13779 461 PGFTSLLQVAYETYNDKKYLDALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVLTDK-ERDTLVKPT 539 (692)
Q Consensus 461 aGii~~Ll~ly~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~G~~HG~sGI~~~Ll~~~~~~~~-~~~~~i~~~ 539 (692)
+|.+-.+...|+.++++++++.+.+.......... .....++-|=.+=.+++++.+++++++ ++++.++++
T Consensus 49 a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~--------~~~~~~~~DD~a~~~la~~~aye~t~~~~yL~~A~~l 120 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNRNG--------GTLIHDFYDDMLWNALAAYRLYKATGKSIYLEDAQLV 120 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTT--------SSSCCSBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC--------CCCCccCccHHHHHHHHHHHHHHHHCCchHHHHHHHH
Confidence 45678888999999999999988775431110000 000011122222245788888888775 799999999
Q ss_pred HHHH-HHhcCC--CCC--CCCCCCCCCCccccccCCchHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHc-----CCCC-
Q psy13779 540 LDAL-LDETFP--SGN--LKSSHGSDSDRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHA-----GLLR- 608 (692)
Q Consensus 540 l~~l-~~~~~~--~g~--w~~~~~~~~~~~~~wCHG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~-----g~~~- 608 (692)
.+++ .....+ .|. |... ..+..... +..-.+.++.++++.++|++|++.|+++.+-+.+. |...
T Consensus 121 ~~~l~~~~wd~~~gGGi~W~~~---~~~~knai--sN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~D 195 (349)
T 3k7x_A 121 WQDLVDTGWNDIMGGGFAWRRP---QMYYKNTP--VNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVED 195 (349)
T ss_dssp HHHHHHHTBCSGGGSCBEEETT---EEEEEEHH--HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBCC
T ss_pred HHHHHHhCCCCCCCCceEecCC---Cccccchh--hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEec
Confidence 9998 454322 121 3210 00111111 34455567778889999999999999988754431 1110
Q ss_pred ----CCCcccc-------chHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Q psy13779 609 ----KGYSLCH-------GVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGY 650 (692)
Q Consensus 609 ----~~~gLCh-------G~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~~ 650 (692)
...|-.. +.+=.+..+..+|+.|+|++|+++|.++++.+++.
T Consensus 196 g~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~ 248 (349)
T 3k7x_A 196 GINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLKE 248 (349)
T ss_dssp EECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 0011100 12226677888999999999999999998877654
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.97 E-value=0.015 Score=63.32 Aligned_cols=86 Identities=15% Similarity=0.052 Sum_probs=64.8
Q ss_pred ccccccCchhHHHHHHHHHHHcCCHHHHHHHHHhhHHHHH-----------hcccc------cCCcccccccchHHHHHH
Q psy13779 3 LVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWH-----------AGLLR------KGYSLCHGVAGNAYAFLT 65 (692)
Q Consensus 3 l~~wchgapg~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~-----------~g~l~------kg~~lchG~ag~~~~~l~ 65 (692)
+-||+.| -++..|++|+++++|++|++.|.++.+-+.+ .|-+. ..++--+=.+-.+.+++.
T Consensus 79 ~~~y~~G--v~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~ 156 (445)
T 3k11_A 79 LASYEWG--VTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIK 156 (445)
T ss_dssp TTSHHHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHH
T ss_pred cCccCHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHH
Confidence 3456662 3567899999999999999999998876543 12220 012333445667799999
Q ss_pred HHhhcCchhHHHHHHHHHHHhhcCC
Q psy13779 66 AYHTTHAEEQMYRALCFANWVTGYN 90 (692)
Q Consensus 66 ~~~~t~~~~~l~ra~~~a~~~~~~~ 90 (692)
+|+.|+|++|+..|.+.|+++...+
T Consensus 157 lY~~T~d~~yl~~a~~~ad~L~~~~ 181 (445)
T 3k11_A 157 LRLKDESLPVDGLIQNYFDFIINKE 181 (445)
T ss_dssp HHHHCTTCCCHHHHHHHHHHHHHTS
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999998755
No 19
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=96.85 E-value=0.015 Score=62.69 Aligned_cols=76 Identities=11% Similarity=0.114 Sum_probs=59.5
Q ss_pred HHHHHHHHHHc---CCHHHHHHHHHhhHHHHHhcccccCC-ccccccc--c-----------h---HHHHHHHHhhcCch
Q psy13779 14 ISLLQVAYETY---NDKKYLDALLKSSDNVWHAGLLRKGY-SLCHGVA--G-----------N---AYAFLTAYHTTHAE 73 (692)
Q Consensus 14 ~~~~~~a~~~~---~~~~~~~~~~~~~~~~w~~g~l~kg~-~lchG~a--g-----------~---~~~~l~~~~~t~~~ 73 (692)
+..++.|++++ ++|+|++.|.++.+-+-+.+.-..|. |+++-+. | + .++++.+|+.|||+
T Consensus 62 l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~ 141 (402)
T 1fp3_A 62 VWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEA 141 (402)
T ss_dssp HHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCH
Confidence 56778889998 99999999999999888876323344 7877762 2 2 44566689999999
Q ss_pred hHHHHHHHHHHHhhcC
Q psy13779 74 EQMYRALCFANWVTGY 89 (692)
Q Consensus 74 ~~l~ra~~~a~~~~~~ 89 (692)
+|+..|.++.+++...
T Consensus 142 ~~~~~A~~l~~~~~~~ 157 (402)
T 1fp3_A 142 RYQSEAVDMMDQIVHW 157 (402)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999877553
No 20
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.56 E-value=0.0091 Score=64.54 Aligned_cols=244 Identities=11% Similarity=-0.013 Sum_probs=129.6
Q ss_pred HHHHHHHhhcccCc-hhHhhhHHHHHHHHhhccC-CC-CCCCCCCCCCCC-cccccccCchhHHHHHHHHHhhcCcHHHH
Q psy13779 405 GILFTLLKSNVLTD-KERDTLVKPTLDALLHETF-PS-GNLKSSHGSDSD-RLVQWCHGSPGFTSLLQVAYETYNDKKYL 480 (692)
Q Consensus 405 GIl~~Ll~l~~~~~-~~~~~~i~~~i~~l~~~~~-~~-~n~~~~~~~~~~-~~~d~~~G~aGii~~Ll~ly~~~~~~~~l 480 (692)
=+++++...+..++ +.+.+.+++.++.+.+... +. |.+-.+...... .....+...+=+++.++. |..+++++++
T Consensus 56 r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l 134 (402)
T 3gt5_A 56 RFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAR 134 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHH
T ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHH
Confidence 34566666666554 4478888889988877432 22 333211100000 011233444556666777 6678999999
Q ss_pred HHHHhccCCCcc--cccCccccc--ccCCCccCcccchhH---HHHHHHHcccCChH-HHHHHHHHHHHHHHHhcC-C-C
Q psy13779 481 DALLKSSDNFVS--WSFGECEYE--WHDKNYYGAAHGVTG---ILFTLLKSNVLTDK-ERDTLVKPTLDALLDETF-P-S 550 (692)
Q Consensus 481 ~~~~~~~~~~~~--w~~~~~~~~--~~~~~~~G~~HG~sG---I~~~Ll~~~~~~~~-~~~~~i~~~l~~l~~~~~-~-~ 550 (692)
+.+++..+.... |........ ....-.+.-.-+... ++-+++.++.++++ ++.+.++++++.+..... + +
T Consensus 135 ~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~ 214 (402)
T 3gt5_A 135 EWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKAD 214 (402)
T ss_dssp HHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccC
Confidence 887765432211 100000000 000000000012222 23347788888775 688899988888876432 2 2
Q ss_pred C--------CCCCCCCCCCCcccccc---CCchHHH----HHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCCCCCCcccc
Q psy13779 551 G--------NLKSSHGSDSDRLVQWC---HGSPGFI----SLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCH 615 (692)
Q Consensus 551 g--------~w~~~~~~~~~~~~~wC---HG~~Gi~----~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~~~~~gLCh 615 (692)
+ +|....+-+.+...... .=.||-. -+++.++++++++++++.|.++.+..++.|.-....|++.
T Consensus 215 g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~ 294 (402)
T 3gt5_A 215 GLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCY 294 (402)
T ss_dssp TSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCTTTCSBCS
T ss_pred CeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccCCCCcEEE
Confidence 2 23211000000000000 0135643 3577888889999999999998877666543211122221
Q ss_pred -----c-----------hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q psy13779 616 -----G-----------VSGNAYAFLTAYHTTHAEEQMYRALCFANWVTG 649 (692)
Q Consensus 616 -----G-----------~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~ 649 (692)
| .+=.+.+++.+|+.|+|++|++.+.++.+++.+
T Consensus 295 ~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 344 (402)
T 3gt5_A 295 GFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQ 344 (402)
T ss_dssp EECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 1 111244478899999999999999988777644
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.47 E-value=0.031 Score=59.72 Aligned_cols=229 Identities=17% Similarity=0.082 Sum_probs=131.0
Q ss_pred HHHHHhhcccCchh-HhhhHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHhhcCcHHHHHHHHh
Q psy13779 407 LFTLLKSNVLTDKE-RDTLVKPTLDALLHETFPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKKYLDALLK 485 (692)
Q Consensus 407 l~~Ll~l~~~~~~~-~~~~i~~~i~~l~~~~~~~~n~~~~~~~~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l~~~~~ 485 (692)
+.+++..++.++++ +.+.+++..+.+.. +++++. +.... .-+.. ++..++.+|+.++++++++.+.+
T Consensus 47 ~~gl~~~y~~tgd~~y~~~a~~~~~~~~~---~~g~l~--~~~~~--lDd~~-----~g~~ll~lY~~Tgd~~yl~~a~~ 114 (373)
T 1nc5_A 47 LCGVLRLWEATGEKRYFEYAKAYADLLID---DNGNLL--FRRDE--LDAIQ-----AGLILFPLYEQTKDERYVKAAKR 114 (373)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHBC---TTCCBC--CCTTC--GGGTG-----GGGGHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhC---CCCccc--CCCCC--cchHH-----HHHHHHHHHHHhCCHHHHHHHHH
Confidence 44677778877655 77778887777643 233322 11111 11222 34578999999999999998887
Q ss_pred ccCCCcccccCcccccccC--CCccCcccchhHHHHHHHHcccCChH-HHHHHHHHHHHHHHHhcC-C-CCCCCCCCCCC
Q psy13779 486 SSDNFVSWSFGECEYEWHD--KNYYGAAHGVTGILFTLLKSNVLTDK-ERDTLVKPTLDALLDETF-P-SGNLKSSHGSD 560 (692)
Q Consensus 486 ~~~~~~~w~~~~~~~~~~~--~~~~G~~HG~sGI~~~Ll~~~~~~~~-~~~~~i~~~l~~l~~~~~-~-~g~w~~~~~~~ 560 (692)
.++.....+......-|.. ...--|+-|..-.+..|+++++++++ ++.+.+.+.++...+... + +|-|.......
T Consensus 115 la~~l~~~~r~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~ 194 (373)
T 1nc5_A 115 LRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEA 194 (373)
T ss_dssp HHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETT
T ss_pred HHHHHHhccCCCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCc
Confidence 6654432221110001111 11234666766556678888888875 788887776766666433 3 45443211100
Q ss_pred ----------CCccccccCCchHHHHHHHHHHHhc-----CCHHHHHHHHHHhHHHHHc-----CCCCCCCccc------
Q psy13779 561 ----------SDRLVQWCHGSPGFISLLQVAYETY-----NDKKYLDALLKSSDNVWHA-----GLLRKGYSLC------ 614 (692)
Q Consensus 561 ----------~~~~~~wCHG~~Gi~~~l~~~~~~~-----~d~~~~~~a~~~~~~i~~~-----g~~~~~~gLC------ 614 (692)
.-....|..|..=.+..+...++.+ ++++|++.++++++.+.+. |+.. .-+.
T Consensus 195 ~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~--~~ld~~~~~~ 272 (373)
T 1nc5_A 195 KKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWY--QIVDKGDRSD 272 (373)
T ss_dssp CCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCB--SBTTCTTSTT
T ss_pred cccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCcee--eecCCCCCCC
Confidence 0112456555554555566666653 3467888888888776643 2210 0122
Q ss_pred -----cchHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHh
Q psy13779 615 -----HGVSGNAYAFLTAYHTT-HAEEQMYRALCFANWVTG 649 (692)
Q Consensus 615 -----hG~aGi~~~ll~l~~~t-~d~~~l~~a~~~~~~l~~ 649 (692)
.|+|...+.+++..+.. -+++|+..|.+..+.+.+
T Consensus 273 ~~~EsSatA~~ay~l~~g~~~g~l~~~Y~~~a~k~~~~l~~ 313 (373)
T 1nc5_A 273 NWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQ 313 (373)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH
Confidence 24578888888876542 146899988887666644
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.02 E-value=0.036 Score=60.18 Aligned_cols=239 Identities=8% Similarity=-0.060 Sum_probs=129.8
Q ss_pred HHHHHHhhcccCchhHhhhHHHHHHHHhhccCC--CCCCCCCCCCCC-CcccccccCchhHHHHHHHHHhhcCcHHHHHH
Q psy13779 406 ILFTLLKSNVLTDKERDTLVKPTLDALLHETFP--SGNLKSSHGSDS-DRLVQWCHGSPGFTSLLQVAYETYNDKKYLDA 482 (692)
Q Consensus 406 Il~~Ll~l~~~~~~~~~~~i~~~i~~l~~~~~~--~~n~~~~~~~~~-~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l~~ 482 (692)
+++++...+...++++.+.++..++.+.+...+ .|.+-.+..... ......+...+=++.++.. |+.++++.+++.
T Consensus 56 ~i~~~a~a~~~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~ 134 (421)
T 2zbl_A 56 MLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKL 134 (421)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHH
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHH
Confidence 456666666533344778889999998875432 133321110000 0001233334556667777 899999888887
Q ss_pred HHhccCCC---------cccccCcccccccCCCccCcccchhH---HHHHHHHcccCChH-HHHHHHHHHHHHHHHhcCC
Q psy13779 483 LLKSSDNF---------VSWSFGECEYEWHDKNYYGAAHGVTG---ILFTLLKSNVLTDK-ERDTLVKPTLDALLDETFP 549 (692)
Q Consensus 483 ~~~~~~~~---------~~w~~~~~~~~~~~~~~~G~~HG~sG---I~~~Ll~~~~~~~~-~~~~~i~~~l~~l~~~~~~ 549 (692)
+.+..+.. ..+.... ...+.... +. -+..+ ++.++++++.++++ ++.+.++++++.+......
T Consensus 135 a~~~~~~l~~~~~d~~~Ggf~~~~-d~d~~~~~--~~-~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~ 210 (421)
T 2zbl_A 135 LDYTIEVIEKYFWSEEEQMCLESW-DEAFSQTE--DY-RGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVAR 210 (421)
T ss_dssp HHHHHHHHHHHTEETTTTEECCEE-CTTSCSBC--SC-EEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCG
T ss_pred HHHHHHHHHHHhccCCCCCeeeee-cCCCCccc--cc-CCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcc
Confidence 66543211 0111000 00000000 00 12333 46668888888886 6888889999887764322
Q ss_pred --CCCCCCCCCCCCCccccc----cCC-------chHH----HHHHHHHHHhc---CC--H-HHHHHHHHHhHHHHHcCC
Q psy13779 550 --SGNLKSSHGSDSDRLVQW----CHG-------SPGF----ISLLQVAYETY---ND--K-KYLDALLKSSDNVWHAGL 606 (692)
Q Consensus 550 --~g~w~~~~~~~~~~~~~w----CHG-------~~Gi----~~~l~~~~~~~---~d--~-~~~~~a~~~~~~i~~~g~ 606 (692)
++..+.....+....... +.+ .||- +-+++.+++++ +| + ++++.|.++.+.+++.+.
T Consensus 211 ~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~ 290 (421)
T 2zbl_A 211 NGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAW 290 (421)
T ss_dssp GGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHB
T ss_pred CCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhc
Confidence 122111111110111111 111 3664 34678888888 45 4 899999998877665443
Q ss_pred CCC-CCcccc-----c-----------hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Q psy13779 607 LRK-GYSLCH-----G-----------VSGNAYAFLTAYHTTHAEEQMYRALCFANWVTG 649 (692)
Q Consensus 607 ~~~-~~gLCh-----G-----------~aGi~~~ll~l~~~t~d~~~l~~a~~~~~~l~~ 649 (692)
-.. ..|++. | .+=.+..++.+++.|++++|++.+.++.+++..
T Consensus 291 d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~~~~~ 350 (421)
T 2zbl_A 291 APDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIK 350 (421)
T ss_dssp SCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 111 122221 2 233466788999999999999999988777654
No 23
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=95.63 E-value=0.089 Score=58.98 Aligned_cols=77 Identities=16% Similarity=0.139 Sum_probs=56.1
Q ss_pred CchhHHHHHHHHHHH-----cCCHHHHHHHHHhhHHHHHh-cccccCCcccccccch------HHHHHHHHhhcCchhHH
Q psy13779 9 GSPGFISLLQVAYET-----YNDKKYLDALLKSSDNVWHA-GLLRKGYSLCHGVAGN------AYAFLTAYHTTHAEEQM 76 (692)
Q Consensus 9 gapg~~~~~~~a~~~-----~~~~~~~~~~~~~~~~~w~~-g~l~kg~~lchG~ag~------~~~~l~~~~~t~~~~~l 76 (692)
|+.=++.+|+.|+++ |..++|+++|+++-+-+-+. +.+.+. |-+|- .++.+.||+.|+|++||
T Consensus 251 ~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~-----g~~~~~De~~~~WAA~eLy~ATgd~~YL 325 (586)
T 3h7l_A 251 GGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQYLND-----GEENIIDEYCALLASVELFKATKETRYL 325 (586)
T ss_dssp THHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHHHSTT-----SCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred cHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCccccCC-----CCccchhHHHHHHHHHHHHHHhCCHHHH
Confidence 444478899999999 55567788887776655443 322221 33444 68888999999999999
Q ss_pred HHHHHHHHHhhcCC
Q psy13779 77 YRALCFANWVTGYN 90 (692)
Q Consensus 77 ~ra~~~a~~~~~~~ 90 (692)
..|.+++..+...+
T Consensus 326 ~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 326 EESRLWAQRLVARQ 339 (586)
T ss_dssp HHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999887644
No 24
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.90 E-value=0.028 Score=60.68 Aligned_cols=80 Identities=14% Similarity=-0.018 Sum_probs=65.3
Q ss_pred chhH----HHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCcccccc--cch--------------HHHHHHHHhh
Q psy13779 10 SPGF----ISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGV--AGN--------------AYAFLTAYHT 69 (692)
Q Consensus 10 apg~----~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~--ag~--------------~~~~l~~~~~ 69 (692)
.||- +-+|..++++.++++|++.|++..+.+++.|.=....|++..+ .|. ..+++.||+.
T Consensus 246 ~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~ 325 (402)
T 3gt5_A 246 QPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATR 325 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHH
Confidence 3676 4467788899999999999999999999998886656887755 232 3458999999
Q ss_pred cCchhHHHHHHHHHHHhhcC
Q psy13779 70 THAEEQMYRALCFANWVTGY 89 (692)
Q Consensus 70 t~~~~~l~ra~~~a~~~~~~ 89 (692)
|||++|+..|.+..+++..+
T Consensus 326 tgd~~yl~~a~~~~~~~~~~ 345 (402)
T 3gt5_A 326 SGDERYWQWYDRLWAYAWQH 345 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999987654
No 25
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=94.78 E-value=0.056 Score=58.64 Aligned_cols=81 Identities=11% Similarity=0.026 Sum_probs=64.0
Q ss_pred chhH----HHHHHHHHHHc---CC--H-HHHHHHHHhhHHHHHhccccc-CCccccccc--ch--------------HHH
Q psy13779 10 SPGF----ISLLQVAYETY---ND--K-KYLDALLKSSDNVWHAGLLRK-GYSLCHGVA--GN--------------AYA 62 (692)
Q Consensus 10 apg~----~~~~~~a~~~~---~~--~-~~~~~~~~~~~~~w~~g~l~k-g~~lchG~a--g~--------------~~~ 62 (692)
.||. +-+|..+++++ ++ + +|++.|++..+.+++.|.-.. ..|++.-.. |. ..+
T Consensus 245 ~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~a 324 (421)
T 2zbl_A 245 TPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGT 324 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHH
Confidence 4886 55778888888 45 6 899999999999999987655 256665432 32 668
Q ss_pred HHHHHhhcCchhHHHHHHHHHHHhhcCC
Q psy13779 63 FLTAYHTTHAEEQMYRALCFANWVTGYN 90 (692)
Q Consensus 63 ~l~~~~~t~~~~~l~ra~~~a~~~~~~~ 90 (692)
++.||+.|||++|+.+|.++.+++...+
T Consensus 325 ll~l~~~tgd~~yl~~a~~~~~~~~~~~ 352 (421)
T 2zbl_A 325 AYALYTLTDDSQYEEWYQKWWDYCIKYL 352 (421)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999886543
No 26
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=94.26 E-value=1.6 Score=49.63 Aligned_cols=73 Identities=14% Similarity=0.152 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCC--cccccccc-----------hHHHHHHHHhhcCchhHH
Q psy13779 12 GFISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGY--SLCHGVAG-----------NAYAFLTAYHTTHAEEQM 76 (692)
Q Consensus 12 g~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~--~lchG~ag-----------~~~~~l~~~~~t~~~~~l 76 (692)
.++.+|+.|+.+|+ ||+|-+.+.++|+.+|+..--.+|. .-.-++++ ..|+=..||+.|||++|+
T Consensus 291 e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DEl~WAAawLy~ATgd~~Yl 370 (639)
T 1clc_A 291 DFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDEEYL 370 (639)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchHHHHHHHHHHHHhCCHHHH
Confidence 46789999999995 7999999999999999875443321 11112222 368888999999999999
Q ss_pred HHHHHHHH
Q psy13779 77 YRALCFAN 84 (692)
Q Consensus 77 ~ra~~~a~ 84 (692)
..|.+.+.
T Consensus 371 ~~a~~~~~ 378 (639)
T 1clc_A 371 RDFENRAA 378 (639)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 27
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=93.62 E-value=2.3 Score=45.95 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCCcccccc----------cc----hHHHHHHHHhhcCchhHH
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGYSLCHGV----------AG----NAYAFLTAYHTTHAEEQM 76 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~----------ag----~~~~~l~~~~~t~~~~~l 76 (692)
++.+|+.|+.+|+ ||+|-+.+.++++.+|+...-.+ +.++.. +| -.++=..||+.|||++|+
T Consensus 155 ~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~--~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl 232 (433)
T 1ks8_A 155 TAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYR--GKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYL 232 (433)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSC--CCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHH
Confidence 5788999999995 69999999999999998754433 223211 22 368888999999999999
Q ss_pred HHHHHHHHHh
Q psy13779 77 YRALCFANWV 86 (692)
Q Consensus 77 ~ra~~~a~~~ 86 (692)
..|.+.+..+
T Consensus 233 ~~~~~~~~~~ 242 (433)
T 1ks8_A 233 NTAESLYDEF 242 (433)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999877543
No 28
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=87.85 E-value=1.1 Score=49.92 Aligned_cols=72 Identities=10% Similarity=-0.049 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccC------Cc-cccccc--c----hHHHHHHHHhhcCchhHHH
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKG------YS-LCHGVA--G----NAYAFLTAYHTTHAEEQMY 77 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg------~~-lchG~a--g----~~~~~l~~~~~t~~~~~l~ 77 (692)
++.+|+.|+++|+ ||.|-+.+.++++.+|+...-.++ .+ .++.-. | ..|+-+.||+.|||++|+.
T Consensus 248 ~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~ 327 (537)
T 3gzk_A 248 FCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGDSAWAR 327 (537)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCGGGHH
T ss_pred HHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCCHHHHH
Confidence 6788999999997 588888888888888876332221 11 111111 1 4788899999999999999
Q ss_pred HHHHHHH
Q psy13779 78 RALCFAN 84 (692)
Q Consensus 78 ra~~~a~ 84 (692)
.|.+...
T Consensus 328 ~a~~~~~ 334 (537)
T 3gzk_A 328 VCEPLLD 334 (537)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 9998764
No 29
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=87.25 E-value=2 Score=48.51 Aligned_cols=72 Identities=13% Similarity=0.192 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCC-ccc---ccccch--------HHHHHHHHhhcCchhHHHH
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGY-SLC---HGVAGN--------AYAFLTAYHTTHAEEQMYR 78 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~-~lc---hG~ag~--------~~~~l~~~~~t~~~~~l~r 78 (692)
++.+|+.|+.+|+ ||+|-+.++++|+.+|+...-.+|. .-| -|.=+. .|+=..||+.|||++|+..
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~ 235 (605)
T 1tf4_A 156 TAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAK 235 (605)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence 6788999999997 7999999999999999875433321 111 111122 6888899999999999999
Q ss_pred HHHHHH
Q psy13779 79 ALCFAN 84 (692)
Q Consensus 79 a~~~a~ 84 (692)
|.+++.
T Consensus 236 a~~~~~ 241 (605)
T 1tf4_A 236 AEYEYD 241 (605)
T ss_dssp HHHHGG
T ss_pred HHHHHH
Confidence 998654
No 30
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=85.76 E-value=2.3 Score=48.19 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCCccccccc-------c----hHHHHHHHHhhcCchhHHHHH
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGYSLCHGVA-------G----NAYAFLTAYHTTHAEEQMYRA 79 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~~lchG~a-------g----~~~~~l~~~~~t~~~~~l~ra 79 (692)
++.+|+.|+.+|+ ||.|-+.++++|+.+|+...-.+|. .|-..+ | ..|+=..||+.|||++|+..|
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~-~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a 234 (614)
T 1g87_A 156 TAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSD-AGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKA 234 (614)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCC-TTCCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCC-CCCCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHHHHHH
Confidence 6788999999995 6999999999999999975544332 122111 1 368888999999999999999
Q ss_pred HHHHH
Q psy13779 80 LCFAN 84 (692)
Q Consensus 80 ~~~a~ 84 (692)
.+++.
T Consensus 235 ~~~~~ 239 (614)
T 1g87_A 235 ESYVP 239 (614)
T ss_dssp HHTGG
T ss_pred HHHHH
Confidence 98654
No 31
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=85.27 E-value=2.6 Score=46.01 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCC---cccccccc--------hHHHHHHHHhhcCchhHHHH
Q psy13779 12 GFISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGY---SLCHGVAG--------NAYAFLTAYHTTHAEEQMYR 78 (692)
Q Consensus 12 g~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~---~lchG~ag--------~~~~~l~~~~~t~~~~~l~r 78 (692)
-++.+|+.|+.+|+ ||.|-+.++++++.+|+..--.+|. +.-.|.=+ ..|+=..||+.|||++|+..
T Consensus 176 e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~ 255 (466)
T 2xfg_A 176 ETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGYTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDK 255 (466)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence 35788999999995 6999999999999999875443321 11111112 26888899999999999999
Q ss_pred HHHHH
Q psy13779 79 ALCFA 83 (692)
Q Consensus 79 a~~~a 83 (692)
|.+++
T Consensus 256 a~~~~ 260 (466)
T 2xfg_A 256 AESYS 260 (466)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 98854
No 32
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=85.14 E-value=3.7 Score=42.35 Aligned_cols=134 Identities=12% Similarity=0.107 Sum_probs=84.9
Q ss_pred chhHHHHHHHHcccCCh-HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC--ccccccCCchHHHHHHHHHHHh-----
Q psy13779 513 GVTGILFTLLKSNVLTD-KERDTLVKPTLDALLDETFPSGNLKSSHGSDSD--RLVQWCHGSPGFISLLQVAYET----- 584 (692)
Q Consensus 513 G~sGI~~~Ll~~~~~~~-~~~~~~i~~~l~~l~~~~~~~g~w~~~~~~~~~--~~~~wCHG~~Gi~~~l~~~~~~----- 584 (692)
.++-++++|.+++..++ +++.+.+.++++|++..+.++|.||....++.. ....+|-...+-.+.++.....
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~ 154 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPF 154 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTS
T ss_pred cHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCc
Confidence 35667888888876543 579999999999999999999999875444322 2355666666655544444321
Q ss_pred ----cCC---HHHHHHHHHHhHHHHHcCC-----------------C-------CCCCccccch-HHHHHHHHHHHHhcC
Q psy13779 585 ----YND---KKYLDALLKSSDNVWHAGL-----------------L-------RKGYSLCHGV-SGNAYAFLTAYHTTH 632 (692)
Q Consensus 585 ----~~d---~~~~~~a~~~~~~i~~~g~-----------------~-------~~~~gLChG~-aGi~~~ll~l~~~t~ 632 (692)
+.+ ++....+.+.++.+.+.-. + ..-|+||-.. +|+..+|+... .
T Consensus 155 ~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~--~- 231 (332)
T 1gxm_A 155 DTDVFSDNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQP--Q- 231 (332)
T ss_dssp CSTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSC--C-
T ss_pred cccccccchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCC--C-
Confidence 223 3455556666665554211 0 1335777443 45666655543 2
Q ss_pred CHHHHHHHHHHHHHHHh
Q psy13779 633 AEEQMYRALCFANWVTG 649 (692)
Q Consensus 633 d~~~l~~a~~~~~~l~~ 649 (692)
+++++....+...|+..
T Consensus 232 ~~~v~~aI~~Av~WL~~ 248 (332)
T 1gxm_A 232 TAEIEQAVRAGVAWFNS 248 (332)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 78888888888888754
No 33
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=84.57 E-value=7.1 Score=41.46 Aligned_cols=135 Identities=9% Similarity=0.049 Sum_probs=82.7
Q ss_pred hhHHHHHHHHcccC-C--h-HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc--cccccCCchHHHHH-HHHHHHhcC
Q psy13779 514 VTGILFTLLKSNVL-T--D-KERDTLVKPTLDALLDETFPSGNLKSSHGSDSDR--LVQWCHGSPGFISL-LQVAYETYN 586 (692)
Q Consensus 514 ~sGI~~~Ll~~~~~-~--~-~~~~~~i~~~l~~l~~~~~~~g~w~~~~~~~~~~--~~~wCHG~~Gi~~~-l~~~~~~~~ 586 (692)
++-++++|.+++.. + + +.+.+.+.++++|++..+.++|.||....++... ...+|-...+-.+. |..+..-..
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~ 230 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRD 230 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccC
Confidence 56678888888765 4 4 5799999999999999999999998765544322 24556555555554 444444111
Q ss_pred -----C----HHHHHHHHHHhHHHHHc-----CCC-------------------CCCCccccchHHHHHHHHHHHHhcCC
Q psy13779 587 -----D----KKYLDALLKSSDNVWHA-----GLL-------------------RKGYSLCHGVSGNAYAFLTAYHTTHA 633 (692)
Q Consensus 587 -----d----~~~~~~a~~~~~~i~~~-----g~~-------------------~~~~gLChG~aGi~~~ll~l~~~t~d 633 (692)
+ ++....+.+.++.+.+. |.. ...++|| |..-.+.++..+.....+
T Consensus 231 ~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs-~~esa~il~~LM~~~~~~ 309 (408)
T 1r76_A 231 GFGFVPPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALS-STESARILLFLMEIEAPS 309 (408)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEE-HHHHHHHHHHHTTSSSCC
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCcccc-HHHHHHHHHHHccCCCCC
Confidence 2 24555566666655442 211 1234554 333333333333444578
Q ss_pred HHHHHHHHHHHHHHHh
Q psy13779 634 EEQMYRALCFANWVTG 649 (692)
Q Consensus 634 ~~~l~~a~~~~~~l~~ 649 (692)
+++...+.+-..|+..
T Consensus 310 ~~~~~aI~~Av~WL~s 325 (408)
T 1r76_A 310 DAVKQAIRGGVAWLNT 325 (408)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888888765
No 34
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=84.11 E-value=1.4 Score=47.84 Aligned_cols=72 Identities=19% Similarity=0.255 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCCcccc---cccc----hHHHHHHHHhhcCchhHHHHHHHH
Q psy13779 12 GFISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGYSLCH---GVAG----NAYAFLTAYHTTHAEEQMYRALCF 82 (692)
Q Consensus 12 g~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~~lch---G~ag----~~~~~l~~~~~t~~~~~l~ra~~~ 82 (692)
-++.+|+.|+.+|+ ||+|-+.++++++.+|+...-.+|...=. +-+| -.++=..||+.|||++|+..|.++
T Consensus 157 ~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~ 236 (441)
T 1ia6_A 157 ETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGNGQSFYQATSFGDDLAWAATWLYTATNDSTYITDAEQF 236 (441)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCCCTTTSCCCCSHHHHHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCchhHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35788999999995 69999999999999999854443321100 1122 468888999999999999999886
Q ss_pred H
Q psy13779 83 A 83 (692)
Q Consensus 83 a 83 (692)
+
T Consensus 237 ~ 237 (441)
T 1ia6_A 237 I 237 (441)
T ss_dssp T
T ss_pred H
Confidence 4
No 35
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=79.19 E-value=59 Score=36.28 Aligned_cols=182 Identities=12% Similarity=0.086 Sum_probs=88.8
Q ss_pred HHHHHHHHHhc-----cCChHHHHHHHHHHHHHHHhhccCCcccccCChHH------HHHHHHHHHHhCChHHHHHHHHH
Q psy13779 248 QAMFYYIYYQR-----THDSKYLDKAQKLIERSLKNLKNRRFSFLNGDAGP------IAVSALIYKALGKQEKLESSVQK 316 (692)
Q Consensus 248 Ial~l~~L~~~-----t~~~~yl~~A~~~i~~~l~~~~~~~~s~~~G~aGi------~~~~~~l~~~~~~~~~~~~~l~~ 316 (692)
.|-.+...+++ +..++|++.|++..+-+.++... . .-.|..|+ ++.++-||+.+++++.++...+.
T Consensus 255 ~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~~~~--y-~~~g~~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~ 331 (586)
T 3h7l_A 255 AIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEHNTQ--Y-LNDGEENIIDEYCALLASVELFKATKETRYLEESRLW 331 (586)
T ss_dssp HHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHHHHH--H-STTSCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhcCcc--c-cCCCCccchhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34455667777 33457888888877655444220 0 11255666 46677899999999866654443
Q ss_pred HHhhhhhhhcC---------CCCCCcccccC-chHH-HHHHHHHHHHhccccchHHH---HHHHHHHHHHhhhh------
Q psy13779 317 LKALAPHLVDL---------RSDIPDEILYG-RAGY-LYSLLFVNKHIKSVNIEASL---IRQVVDSILRSGQN------ 376 (692)
Q Consensus 317 ~~~~~~~~~~~---------~~~~~~dll~G-~AG~-l~~L~~l~~~~~d~~~~~~~---i~~v~~~Il~~~~~------ 376 (692)
...+.....+. +++.+-+.+++ .+|+ +++|+.+.+.+++....+.+ +++.++.-++..++
T Consensus 332 a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg 411 (586)
T 3h7l_A 332 AQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFG 411 (586)
T ss_dssp HHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSC
T ss_pred HHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccc
Confidence 33333221110 00112223332 2343 34466667777765444222 22323321111110
Q ss_pred ----hh----hhhcC--CCCcchhccccccc-CCccchhHHHHHHHhhcccCch-----hHhhhHHHHHHHHhh
Q psy13779 377 ----LS----ARKKS--RVPLEYEWHDKNYY-GAAHGVTGILFTLLKSNVLTDK-----ERDTLVKPTLDALLH 434 (692)
Q Consensus 377 ----~~----~~~~~--~~pL~~~w~~~~~l-G~ahG~aGIl~~Ll~l~~~~~~-----~~~~~i~~~i~~l~~ 434 (692)
+. ...++ ..|...+ +...+ |-..-++..+.+++..+..+++ ++.+.+...+++|+=
T Consensus 412 ~~~~~~~~~~~~~~~~y~~p~~~~--~~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~qldyiLG 483 (586)
T 3h7l_A 412 YPRQYVKGVNESKRDAFFVAHNNE--SGYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDALNWIVG 483 (586)
T ss_dssp CCCEEECCTTSCCEEESSCCSSST--TSSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHBT
T ss_pred cHHHHhhhhccccccccccccCCC--CCCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhcc
Confidence 10 00000 1111000 01234 4333466777777777776653 367777788888754
No 36
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=74.91 E-value=5.8 Score=44.83 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCCcccc-cc---------cc----hHHHHHHHHhhcCchhHH
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGYSLCH-GV---------AG----NAYAFLTAYHTTHAEEQM 76 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~~lch-G~---------ag----~~~~~l~~~~~t~~~~~l 76 (692)
++.+|+.|+.+|+ ||+|-+.+.++++.+|+...-.+ +.++ ++ +| -.|+=..||+.|||++|+
T Consensus 222 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~--~~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl 299 (611)
T 2yik_A 222 TAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNP--KGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYL 299 (611)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSC--CCCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcC--CcccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHH
Confidence 5788999999995 69999999999999998743322 2221 11 11 368888999999999999
Q ss_pred HHHHHHH
Q psy13779 77 YRALCFA 83 (692)
Q Consensus 77 ~ra~~~a 83 (692)
..|.+.+
T Consensus 300 ~~a~~~~ 306 (611)
T 2yik_A 300 DEAFKYY 306 (611)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998864
No 37
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=73.25 E-value=5.5 Score=45.03 Aligned_cols=69 Identities=19% Similarity=0.235 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHhhHHHHHhcccccCCcccc-------cc-------cc----hHHHHHHHHhhcCc
Q psy13779 13 FISLLQVAYETYN--DKKYLDALLKSSDNVWHAGLLRKGYSLCH-------GV-------AG----NAYAFLTAYHTTHA 72 (692)
Q Consensus 13 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~w~~g~l~kg~~lch-------G~-------ag----~~~~~l~~~~~t~~ 72 (692)
++.+|+.|+.+|+ ||+|-+.++++++.+|+...-.+| .++ ++ +| ..|+=..||+.|||
T Consensus 293 ~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~~--~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd 370 (609)
T 1ut9_A 293 FAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPD--IYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGK 370 (609)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCTT--CCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCcc--cccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCC
Confidence 5677999999994 799999999999999987543322 111 11 11 36788899999999
Q ss_pred hhHHHHHHHHH
Q psy13779 73 EEQMYRALCFA 83 (692)
Q Consensus 73 ~~~l~ra~~~a 83 (692)
++|+..|.+..
T Consensus 371 ~~Yl~~a~~~~ 381 (609)
T 1ut9_A 371 DEYKNYLMNSP 381 (609)
T ss_dssp HHHHHHHHTST
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 38
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=62.99 E-value=15 Score=40.00 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhHHHHHh-----ccc------ccC----Ccc----cccccchH---HHHHHHHhhcC
Q psy13779 14 ISLLQVAYETYNDKKYLDALLKSSDNVWHA-----GLL------RKG----YSL----CHGVAGNA---YAFLTAYHTTH 71 (692)
Q Consensus 14 ~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~-----g~l------~kg----~~l----chG~ag~~---~~~l~~~~~t~ 71 (692)
+--|.-||..-+++.+++-|+..|+.+-.. |+. +.| ++- |-.+|+-| .=|-+|.++||
T Consensus 111 LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTG 190 (478)
T 1nxc_A 111 VGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSG 190 (478)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHC
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHC
Confidence 445677898899999999999999987532 432 222 111 22233332 44677999999
Q ss_pred chhHHHHHHHHHHHhhc
Q psy13779 72 AEEQMYRALCFANWVTG 88 (692)
Q Consensus 72 ~~~~l~ra~~~a~~~~~ 88 (692)
|++|...|.+....+..
T Consensus 191 d~~Y~~~a~~~~~~l~~ 207 (478)
T 1nxc_A 191 DPVFAEKVMKIRTVLNK 207 (478)
T ss_dssp CTHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHh
Confidence 99999999998877654
No 39
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=59.33 E-value=6.5 Score=42.93 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=32.6
Q ss_pred HHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCCC
Q psy13779 62 AFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDR 99 (692)
Q Consensus 62 ~~l~~~~~t~~~~~l~ra~~~a~~~~~~~~~~~~~~~~ 99 (692)
.+|+.|.+|||+.+|..|..+|+.+...++...++|-.
T Consensus 113 GLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~ 150 (478)
T 1nxc_A 113 GLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWA 150 (478)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCS
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcc
Confidence 57999999999999999999999999888766566543
No 40
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=57.09 E-value=54 Score=34.75 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=32.9
Q ss_pred chhHHHHHHHhhccc-C--c-hhHhhhHHHHHHHHhhccCCCCCCC
Q psy13779 402 GVTGILFTLLKSNVL-T--D-KERDTLVKPTLDALLHETFPSGNLK 443 (692)
Q Consensus 402 G~aGIl~~Ll~l~~~-~--~-~~~~~~i~~~i~~l~~~~~~~~n~~ 443 (692)
..+-++.+|.+++.. + + ..+.+.+.+.+++++..+.++|-|+
T Consensus 150 dTa~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWp 195 (408)
T 1r76_A 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWP 195 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCB
T ss_pred hHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCc
Confidence 466778888887776 4 3 3478889999999999888888776
No 41
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=54.40 E-value=38 Score=34.88 Aligned_cols=143 Identities=11% Similarity=0.064 Sum_probs=82.7
Q ss_pred chhHHHHHHHhhcccCc-hhHhhhHHHHHHHHhhccCCCCCCCCCCCCCCCcccccccCchhHHHHHHHHHhhcCcHHHH
Q psy13779 402 GVTGILFTLLKSNVLTD-KERDTLVKPTLDALLHETFPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKKYL 480 (692)
Q Consensus 402 G~aGIl~~Ll~l~~~~~-~~~~~~i~~~i~~l~~~~~~~~n~~~~~~~~~~~~~d~~~G~aGii~~Ll~ly~~~~~~~~l 480 (692)
..+-++.+|.+.+..++ +.+.+.+.+.+++++..+.++|-|+...... .+
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFdpd~----~~------------------------- 125 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALPQFYPLK----GG------------------------- 125 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCCBSEESCC----SG-------------------------
T ss_pred cHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCccccCCCc----cc-------------------------
Confidence 46677888888776553 3477888999999999888888776211110 00
Q ss_pred HHHHhccCCCcccccCcccccccCCCccCcccchhH-HHHHHHHccc---------CCh---HHHHHHHHHHHHHHHHhc
Q psy13779 481 DALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVTG-ILFTLLKSNV---------LTD---KERDTLVKPTLDALLDET 547 (692)
Q Consensus 481 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~G~~HG~sG-I~~~Ll~~~~---------~~~---~~~~~~i~~~l~~l~~~~ 547 (692)
-...+-|+-.+++ ++-.|..+.. ..+ ++....++++++++++.+
T Consensus 126 -----------------------Yl~~IpFnDDvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 126 -----------------------YSDHATFNDNGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp -----------------------GGGSEECGGGHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -----------------------ccccCCcchHHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHHhh
Confidence 0111222223333 3333333321 122 345678999999999998
Q ss_pred CCCCCCCCCCCCCCC------------ccccccCCc-hHHHHHHHHHHHhcCCHHHHHHHHHHhH
Q psy13779 548 FPSGNLKSSHGSDSD------------RLVQWCHGS-PGFISLLQVAYETYNDKKYLDALLKSSD 599 (692)
Q Consensus 548 ~~~g~w~~~~~~~~~------------~~~~wCHG~-~Gi~~~l~~~~~~~~d~~~~~~a~~~~~ 599 (692)
.++|.|...-+.+++ ..+++|-.. .|++.+++.... ++++++.+.++++
T Consensus 183 e~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~---~~~v~~aI~~Av~ 244 (332)
T 1gxm_A 183 WKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQ---TAEIEQAVRAGVA 244 (332)
T ss_dssp CEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCC---CHHHHHHHHHHHH
T ss_pred CccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCC---CHHHHHHHHHHHH
Confidence 876655433332211 134666544 367666665432 6788777777654
No 42
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=48.65 E-value=29 Score=38.31 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhHHHHHh-----cccccCCccccc---------------ccchHHHHHHHHhhcCch
Q psy13779 14 ISLLQVAYETYNDKKYLDALLKSSDNVWHA-----GLLRKGYSLCHG---------------VAGNAYAFLTAYHTTHAE 73 (692)
Q Consensus 14 ~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~-----g~l~kg~~lchG---------------~ag~~~~~l~~~~~t~~~ 73 (692)
+--|.-||..-+++.+|+-|+..|+.+-.. |+...-..+=+| ++-.-.=|.+|.++|||+
T Consensus 175 LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~ 254 (538)
T 1x9d_A 175 LGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDK 254 (538)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCT
T ss_pred hhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCc
Confidence 345677888889999999999999987532 443211111122 222234577899999999
Q ss_pred hHHHHHHHHHHHhhc
Q psy13779 74 EQMYRALCFANWVTG 88 (692)
Q Consensus 74 ~~l~ra~~~a~~~~~ 88 (692)
+|...|.+....+..
T Consensus 255 ~Y~~~a~r~~~~l~~ 269 (538)
T 1x9d_A 255 KFQEAVEKVTQHIHG 269 (538)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998888764
No 43
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=46.65 E-value=13 Score=41.12 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=35.2
Q ss_pred HHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcc
Q psy13779 62 AFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRPYSL 103 (692)
Q Consensus 62 ~~l~~~~~t~~~~~l~ra~~~a~~~~~~~~~~~~~~~~p~sl 103 (692)
.+|+.|.+++|+.+|..|..+|+.++..++...++|-...-|
T Consensus 177 GLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl 218 (538)
T 1x9d_A 177 GLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNI 218 (538)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEET
T ss_pred hhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 578999999999999999999999999887666776554444
No 44
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=42.99 E-value=54 Score=33.84 Aligned_cols=76 Identities=16% Similarity=0.146 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccC--Ccccccccc---h-----------HHHHHHHHhhcCchhHH
Q psy13779 13 FISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKG--YSLCHGVAG---N-----------AYAFLTAYHTTHAEEQM 76 (692)
Q Consensus 13 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg--~~lchG~ag---~-----------~~~~l~~~~~t~~~~~l 76 (692)
|+.+|..|.+.++++.|.+.|.+-...|+++.....+ +-|.=|.-| . -.+|-.+++.++|..|.
T Consensus 111 IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~ 190 (334)
T 1wzz_A 111 IALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTADPRWR 190 (334)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHCCTHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccCCchHH
Confidence 7899999999999999999999999999998554211 112122222 1 14555567889999998
Q ss_pred HHHHHHHHHhhc
Q psy13779 77 YRALCFANWVTG 88 (692)
Q Consensus 77 ~ra~~~a~~~~~ 88 (692)
.-+.+-...+..
T Consensus 191 ~~~~~~~~ll~~ 202 (334)
T 1wzz_A 191 QVMEDGIRLVSA 202 (334)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888777766644
No 45
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=37.08 E-value=79 Score=33.89 Aligned_cols=74 Identities=16% Similarity=0.108 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhHHHHHhcccccCCc--c-------cccccchHHHHHHHHhhcCchhHHHHHHHHH
Q psy13779 13 FISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYS--L-------CHGVAGNAYAFLTAYHTTHAEEQMYRALCFA 83 (692)
Q Consensus 13 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~w~~g~l~kg~~--l-------chG~ag~~~~~l~~~~~t~~~~~l~ra~~~a 83 (692)
++..++.|+.+-.|++-.+.++..+ .-|.-|-+-+-.| . |+ -+=..|++|.||+.|++++|+.-|.+.+
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma-~~~~lgdi~~~~~~~~~~~~~~~~~-sp~lL~allEL~~atq~~~~l~lA~~~g 455 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIA-NDQGLGDIGTAPGKEVKVNMDTTNS-DPYALFALLDLYHASQVADYRKLAEKIG 455 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHH-HHTTCEECTTBTTBSCEECTTCCCC-CHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH-hhCCccccCCCcCcccccccCCCCc-CHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5677889999999998877666543 3344444422000 0 10 1224688899999999999999999999
Q ss_pred HHhhc
Q psy13779 84 NWVTG 88 (692)
Q Consensus 84 ~~~~~ 88 (692)
+-+..
T Consensus 456 ~nl~~ 460 (543)
T 2v8i_A 456 DNIIK 460 (543)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 46
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=35.65 E-value=20 Score=39.33 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=32.7
Q ss_pred HHHHHHhhc------CchhHHHHHHHHHHHhhcCCC-CCCCCCCC
Q psy13779 62 AFLTAYHTT------HAEEQMYRALCFANWVTGYNK-HEDTTPDR 99 (692)
Q Consensus 62 ~~l~~~~~t------~~~~~l~ra~~~a~~~~~~~~-~~~~~~~~ 99 (692)
.+|+.|.++ +|+.+|..|..+|+.++..++ ...++|-.
T Consensus 107 GLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~ 151 (511)
T 1dl2_A 107 GLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYS 151 (511)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCS
T ss_pred hhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCc
Confidence 679999999 999999999999999998877 66666543
No 47
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=35.04 E-value=60 Score=34.19 Aligned_cols=72 Identities=13% Similarity=0.014 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcCCH---HHHHHHHHhhHHHHHhcc------cccCCcccccccch----H----HHHHHHHhhcCchhH
Q psy13779 13 FISLLQVAYETYNDK---KYLDALLKSSDNVWHAGL------LRKGYSLCHGVAGN----A----YAFLTAYHTTHAEEQ 75 (692)
Q Consensus 13 ~~~~~~~a~~~~~~~---~~~~~~~~~~~~~w~~g~------l~kg~~lchG~ag~----~----~~~l~~~~~t~~~~~ 75 (692)
|+.+|..|.+.++++ +|.+.|++-...|+++.. +.-|+.-.. .++ . ++|-.+|+.++++.|
T Consensus 140 IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~~~~~~~~~l~~g~~~~~--~~~~~npSY~~p~~l~~f~~~~~~~~W 217 (386)
T 1v5d_A 140 IAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKASNVTNNNQLNLGDWDSK--SSLDTRPSDWMMSHLRAFYEFTGDKTW 217 (386)
T ss_dssp HHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHHHHBCTTSSBCSSTTSCT--TCCCBCGGGCCHHHHHHHHHHHCCTHH
T ss_pred HHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHhcccCCCCeeeecccCCC--CCCeechhhccHHHHHHHHHhcCCCcH
Confidence 689999999999997 899999998888888743 333333111 122 2 667778899999889
Q ss_pred HHHHHHHHHHh
Q psy13779 76 MYRALCFANWV 86 (692)
Q Consensus 76 l~ra~~~a~~~ 86 (692)
..-+.+-...+
T Consensus 218 ~~v~~~~~~~l 228 (386)
T 1v5d_A 218 LTVINNLYDVY 228 (386)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87776655553
No 48
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=33.76 E-value=2.5e+02 Score=30.67 Aligned_cols=115 Identities=13% Similarity=0.021 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHhcC-C-CCCCCCCC---CCCCCccccccCCch---HH---HHHHHHHHHhcCCHHHHHHHHHHh
Q psy13779 530 KERDTLVKPTLDALLDETF-P-SGNLKSSH---GSDSDRLVQWCHGSP---GF---ISLLQVAYETYNDKKYLDALLKSS 598 (692)
Q Consensus 530 ~~~~~~i~~~l~~l~~~~~-~-~g~w~~~~---~~~~~~~~~wCHG~~---Gi---~~~l~~~~~~~~d~~~~~~a~~~~ 598 (692)
+.+++.+.+..+.++..+. . +| .|... .........|..|.. ++ .+-+..++++++|++|.+.+.++.
T Consensus 124 ~~lL~kA~dLadrLlpAFd~Tptg-iP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~ 202 (511)
T 1dl2_A 124 TVYLNKAIDLGDRLALAFLSTQTG-IPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVY 202 (511)
T ss_dssp HHHHHHHHHHHHHHHGGGGSSSSS-CCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCC-CCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHH
Confidence 3688889998888887654 2 22 22111 011111223444332 22 234777888999999999999988
Q ss_pred HHHHHc--------CCCC-----CCCcccc-----chH--HHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy13779 599 DNVWHA--------GLLR-----KGYSLCH-----GVS--GNAYAFLTAYHTTHAEEQMYRALCFAN 645 (692)
Q Consensus 599 ~~i~~~--------g~~~-----~~~gLCh-----G~a--Gi~~~ll~l~~~t~d~~~l~~a~~~~~ 645 (692)
+.+|+. |+.- .+-.+.. |.. .-...|+..+..++++.|++.-....+
T Consensus 203 ~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~ 269 (511)
T 1dl2_A 203 EPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSME 269 (511)
T ss_dssp HHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 766642 3320 1111222 222 234567778888889888776665444
No 49
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=32.39 E-value=25 Score=38.58 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=31.8
Q ss_pred HHHHHHhhcCch------------hHHHHHHHHHHHhhcCCCCCCCCCCC
Q psy13779 62 AFLTAYHTTHAE------------EQMYRALCFANWVTGYNKHEDTTPDR 99 (692)
Q Consensus 62 ~~l~~~~~t~~~------------~~l~ra~~~a~~~~~~~~~~~~~~~~ 99 (692)
.+|+.|.+++|+ .+|..|..+|+.++..++...++|-.
T Consensus 108 GLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~ 157 (503)
T 1hcu_A 108 GLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDP 157 (503)
T ss_dssp HHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCS
T ss_pred HHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcc
Confidence 678999999995 99999999999999888766666543
No 50
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=32.09 E-value=6.1e+02 Score=28.83 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=28.0
Q ss_pred hHHHHHHHHcccC----ChHHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy13779 515 TGILFTLLKSNVL----TDKERDTLVKPTLDALLDETFPSGNLKS 555 (692)
Q Consensus 515 sGI~~~Ll~~~~~----~~~~~~~~i~~~l~~l~~~~~~~g~w~~ 555 (692)
+-++.+|..+... ..+++...++++++|+.+.+.++|.|..
T Consensus 535 a~vL~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q~~DGsW~g 579 (732)
T 1w6k_A 535 SAVMQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEG 579 (732)
T ss_dssp HHHHHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHSCTTSCCCC
T ss_pred HHHHHHHHHhccccccccchhhHHHHHHHHHHHHhhcCCCCCccC
Confidence 3455555554332 2235667899999999999888888864
No 51
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=31.32 E-value=33 Score=37.27 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=30.9
Q ss_pred HHHHHHhhc-Cc-----------hhHHHHHHHHHHHhhcCCCCCCCCCC
Q psy13779 62 AFLTAYHTT-HA-----------EEQMYRALCFANWVTGYNKHEDTTPD 98 (692)
Q Consensus 62 ~~l~~~~~t-~~-----------~~~l~ra~~~a~~~~~~~~~~~~~~~ 98 (692)
.+|+.|.++ |+ +.+|..|..+|+.++..++...++|-
T Consensus 95 GLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~ 143 (475)
T 2ri9_A 95 GMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPY 143 (475)
T ss_dssp HHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCC
T ss_pred HHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCC
Confidence 678999999 77 79999999999999988776555543
No 52
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=29.43 E-value=96 Score=33.60 Aligned_cols=73 Identities=15% Similarity=0.082 Sum_probs=49.6
Q ss_pred HHHHHHHHc-CC-----------HHHHHHHHHhhHHHHHh-----cccc------cC---Ccccccccch---HHHHHHH
Q psy13779 16 LLQVAYETY-ND-----------KKYLDALLKSSDNVWHA-----GLLR------KG---YSLCHGVAGN---AYAFLTA 66 (692)
Q Consensus 16 ~~~~a~~~~-~~-----------~~~~~~~~~~~~~~w~~-----g~l~------kg---~~lchG~ag~---~~~~l~~ 66 (692)
-|.-||..- ++ +.+|+-|+..|+.+-.. |+.. .| .+-|-.+|+- -.=|-+|
T Consensus 95 GLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~L 174 (475)
T 2ri9_A 95 GMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRL 174 (475)
T ss_dssp HHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHH
T ss_pred HHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHH
Confidence 456677666 55 79999999999977532 4331 11 1112223333 3557779
Q ss_pred HhhcCchhHHHHHHHHHHHhhc
Q psy13779 67 YHTTHAEEQMYRALCFANWVTG 88 (692)
Q Consensus 67 ~~~t~~~~~l~ra~~~a~~~~~ 88 (692)
-++|||++|...|.+....+..
T Consensus 175 S~lTGd~~Y~~~a~~~~~~l~~ 196 (475)
T 2ri9_A 175 SDLTGDEEYAKLSQKAESYLLK 196 (475)
T ss_dssp HHHHSCTHHHHHHHHHHHHHHS
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999998888765
No 53
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=27.00 E-value=79 Score=34.56 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCC------------HHHHHHHHHhhHHHHHh-----cccc------c----CCccc---ccccchHHHHH
Q psy13779 15 SLLQVAYETYND------------KKYLDALLKSSDNVWHA-----GLLR------K----GYSLC---HGVAGNAYAFL 64 (692)
Q Consensus 15 ~~~~~a~~~~~~------------~~~~~~~~~~~~~~w~~-----g~l~------k----g~~lc---hG~ag~~~~~l 64 (692)
--|.-||...++ +.+|+-|+..|+.+-.. |+.. . ..+-+ .+++-.-.=|-
T Consensus 107 GGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~ 186 (503)
T 1hcu_A 107 GGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWT 186 (503)
T ss_dssp HHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHH
T ss_pred hHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCCCCccccccccceeeehH
Confidence 345667776666 49999999999987432 4321 1 11111 22222335577
Q ss_pred HHHhhcCchhHHHHHHHHHHHhhc
Q psy13779 65 TAYHTTHAEEQMYRALCFANWVTG 88 (692)
Q Consensus 65 ~~~~~t~~~~~l~ra~~~a~~~~~ 88 (692)
.|-++|||++|...|.+....+..
T Consensus 187 ~LS~lTGd~~Y~~~a~~~~~~l~~ 210 (503)
T 1hcu_A 187 RLSDLTGNPQYAQLAQKGESYLLN 210 (503)
T ss_dssp HHHHHHSCTHHHHHHHHHHHHHHS
T ss_pred HHHHHhCChHHHHHHHHHHHHHHh
Confidence 899999999999999998888765
No 54
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=26.27 E-value=5.3e+02 Score=27.27 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=38.1
Q ss_pred CchHHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccHH----HHHHHHHHHhccCChHHHHHHHHHHHH
Q psy13779 206 HPSFETKVWATLTRLIEDIDSEYETSDKFRDHDYSVYVGTSG----QAMFYYIYYQRTHDSKYLDKAQKLIER 274 (692)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sLY~G~aG----Ial~l~~L~~~t~~~~yl~~A~~~i~~ 274 (692)
.+++.+++.++.+++-+-.++.-..-....+...+.|.- +| .+..-..|++.|+++.|++.+.+....
T Consensus 170 D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~ 241 (433)
T 1ks8_A 170 DGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 467777776666655544433211000000111233422 33 455567899999999999999886643
No 55
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=23.85 E-value=3.5e+02 Score=30.25 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCC
Q psy13779 534 TLVKPTLDALLDETFPSGNLKSSH 557 (692)
Q Consensus 534 ~~i~~~l~~l~~~~~~~g~w~~~~ 557 (692)
+.+++.++|+.+.+.++|.|....
T Consensus 59 ~~~~~~~~yl~~~Q~~dGgW~~~~ 82 (631)
T 2sqc_A 59 DRMEKIRRYLLHEQREDGTWALYP 82 (631)
T ss_dssp HHHHHHHHHHHHHSCTTSCCCSST
T ss_pred HHHHHHHHHHHHhcCCCCCccCCC
Confidence 678889999999998889996543
No 56
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=23.07 E-value=1.3e+02 Score=34.72 Aligned_cols=82 Identities=13% Similarity=-0.069 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCCCCccccccCCchHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCCCCCCccccchH--------HH
Q psy13779 549 PSGNLKSSHGSDSDRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVS--------GN 620 (692)
Q Consensus 549 ~~g~w~~~~~~~~~~~~~wCHG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~~~~~gLChG~a--------Gi 620 (692)
++|.|... ..+|-+|..-.+.++..+.+.++.+-+.....+..+.....-.. .+..+..|.+ +.
T Consensus 224 ~DG~~~EG-------~~Yw~yg~~~l~~~~~aL~~~tg~d~~~p~l~k~a~y~l~~~~p-~g~~~nfgDs~~~~~~p~~~ 295 (749)
T 3e7j_A 224 PSHNYHQG-------MSALNVRFTNDLFALWILDRMGAGNVFNPGQQFILYDAIYKRRP-DGQILAGGDVDYSRKKPKYY 295 (749)
T ss_dssp GGCCCSSH-------HHHHHHHHHHHHHHHHHHHHHTTCCCSCGGGGGTTHHHHHTBCT-TSCBCCCSSCCCCSSSCCCC
T ss_pred CCCCcccc-------HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHeeCC-CCceeecCCCCcccCccccc
Confidence 57877631 34788888888887777777765432222222333332221110 1111222221 11
Q ss_pred HHHHHHHHHhcCCHHHHH
Q psy13779 621 AYAFLTAYHTTHAEEQMY 638 (692)
Q Consensus 621 ~~~ll~l~~~t~d~~~l~ 638 (692)
...+..+++.++|+.+..
T Consensus 296 ~~al~~~a~~~~dp~l~~ 313 (749)
T 3e7j_A 296 TMPALLAGSYYKDEYLNY 313 (749)
T ss_dssp HHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHhhCCHHHHH
Confidence 234555678889998663
No 57
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=22.22 E-value=1.3e+02 Score=31.02 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=51.4
Q ss_pred CchHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHcCCCCCC--CccccchHH--------------HHHHHHHHHHhcCC
Q psy13779 570 GSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKG--YSLCHGVSG--------------NAYAFLTAYHTTHA 633 (692)
Q Consensus 570 G~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~i~~~g~~~~~--~gLChG~aG--------------i~~~ll~l~~~t~d 633 (692)
|+.=|+.+|+.+.+..++++|++.|.++++.+++....... +-|.-|.-| ...+|..+++.+++
T Consensus 107 gDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~~ 186 (334)
T 1wzz_A 107 GDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTAD 186 (334)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccCC
Confidence 34458899999999999999999999999887765431100 112223322 12556667777887
Q ss_pred HHHHHHHHHHHHHH
Q psy13779 634 EEQMYRALCFANWV 647 (692)
Q Consensus 634 ~~~l~~a~~~~~~l 647 (692)
..|.+.+..-...+
T Consensus 187 ~~W~~~~~~~~~ll 200 (334)
T 1wzz_A 187 PRWRQVMEDGIRLV 200 (334)
T ss_dssp THHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH
Confidence 77777766544444
No 58
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=20.60 E-value=2.3e+02 Score=29.32 Aligned_cols=73 Identities=15% Similarity=0.034 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCH---HHHHHHHHhhHHHHHhcccccCCc-cccc--ccch-----H----HHHHHHHhhcCchhHHH
Q psy13779 13 FISLLQVAYETYNDK---KYLDALLKSSDNVWHAGLLRKGYS-LCHG--VAGN-----A----YAFLTAYHTTHAEEQMY 77 (692)
Q Consensus 13 ~~~~~~~a~~~~~~~---~~~~~~~~~~~~~w~~g~l~kg~~-lchG--~ag~-----~----~~~l~~~~~t~~~~~l~ 77 (692)
|+.+|..|.+.++++ +|.+.|++-...|+++-.- .|.- |-=| .+++ . .+|-.+++.++++.|..
T Consensus 125 IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~-~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~ 203 (363)
T 1kwf_A 125 IALALIFADKLWGSSGAINYGQEARTLINNLYNHCVE-HGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQ 203 (363)
T ss_dssp HHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBC-TTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHH
T ss_pred HHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhcc-CCCeEEeccccCCCCCEecchhcCHHHHHHHHHccCCchHHH
Confidence 789999999999988 8999999988889887332 1111 2212 2221 1 12233456677778876
Q ss_pred HHHHHHHHh
Q psy13779 78 RALCFANWV 86 (692)
Q Consensus 78 ra~~~a~~~ 86 (692)
-+.+-...+
T Consensus 204 ~~~~~~~~l 212 (363)
T 1kwf_A 204 VADKCYQIV 212 (363)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555544
Done!