RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13779
(692 letters)
>d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC
{Lactococcus lactis [TaxId: 1358]}
Length = 409
Score = 142 bits (358), Expect = 2e-37
Identities = 53/326 (16%), Positives = 95/326 (29%), Gaps = 38/326 (11%)
Query: 392 HDKNYYGAAHGVTGILFTLLKSNVLTDKERDTLVK--PTLDALLHETFPSGNLKSSHGSD 449
+ G GI ++L +K ++ L ++ + E NL++ D
Sbjct: 74 YGLLTGSLYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPD 133
Query: 450 SDRLVQWCHGSPGF-TSLLQVAYETYNDK-----KYLDALLKSSDNFVSW--------SF 495
D G G + LL + E Y+D +L L K ++ +S S
Sbjct: 134 YD----VIEGLSGILSYLLLINDEQYDDLKILIINFLSNLTKENNGLISLYIKSENQMSQ 189
Query: 496 GECEYEWHDKNYYGAAHGVTGILFTLLKS--NVLTDKERDTLVKPTLDALL--------- 544
E E G AHG+ G+ L + +++ + ++ +
Sbjct: 190 SESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQ 249
Query: 545 -----DETFPSGNLKSSHGSDSDRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSD 599
+ S WC+G PG L ++ ++D K +
Sbjct: 250 FLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILE 309
Query: 600 NVWHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPD 659
+ L Y +CHG SG + ++ F + +
Sbjct: 310 SAMQRKLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEE--YGDE 367
Query: 660 RPYSLYEGKVGVAFFLLDILKPTNAK 685
EG G L N
Sbjct: 368 SGTGFLEGISGCILVLSKFEYSINFT 393
Score = 140 bits (354), Expect = 7e-37
Identities = 49/351 (13%), Positives = 114/351 (32%), Gaps = 44/351 (12%)
Query: 217 LTRLIEDIDSEYET-----SDKFRDHDYSVYVGTSGQAMFYYIYYQRTHDSKYLDKAQKL 271
+ R +E I ++++ + F + ++ G G + + + Y K
Sbjct: 4 IKRNVEKIIAQWDERTRKNKENFDFGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNY 63
Query: 272 IERSLKNLKNRRFSFLNGDAGPIAVSALIYKALGKQEKLESSVQKLKALAPHLVDLR--- 328
IE + L + +G ++ I EK ++ + L + V +
Sbjct: 64 IEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEG 123
Query: 329 ------SDIPDEILYGRAGYLYSLLFVNKHIKSVNIEASLIRQVVDSILRSGQNLSARKK 382
+ +++ G +G L LL +N +++ +I + + + +S K
Sbjct: 124 FNLENITPPDYDVIEGLSGILSYLLLINDEQYD-DLKILIINFLSNLTKENNGLISLYIK 182
Query: 383 -----SRVPLEYEWHDKNYYGAAHGVTGILFTLLKS--NVLTDKERDTLVKPTLDALL-- 433
S+ E G AHG+ G+ L + +++ + ++ +
Sbjct: 183 SENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKF 242
Query: 434 ------------HETFPSGNLKSSHGSDSDRLVQWCHGSPGFTSLLQVAYETYNDKKYLD 481
+ S WC+G PG + L ++ ++D
Sbjct: 243 ELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVD 302
Query: 482 ALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVTGILFTLLKSNVLTDKER 532
K ++ + G + Y HG +G++ L + ++
Sbjct: 303 KAEKILESAMQRKLG--------IDSYMICHGYSGLIEICSLFKRLLNTKK 345
Score = 111 bits (277), Expect = 1e-26
Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 3/128 (2%)
Query: 1 DRLVQWCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNA 60
WC+G PG L ++ ++D K ++ L Y +CHG +G
Sbjct: 272 FIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLI 331
Query: 61 YAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKP 120
+ ++ F + + EG G L
Sbjct: 332 EICSLFKRLLNTKKFDSYMEEFNVNSEQILEE--YGDESGTGFLEGISGCILVLSKFEYS 389
Query: 121 TNAK-WNQ 127
N W Q
Sbjct: 390 INFTYWRQ 397
Score = 62.2 bits (150), Expect = 9e-11
Identities = 65/388 (16%), Positives = 129/388 (33%), Gaps = 34/388 (8%)
Query: 8 HGSPGFISLLQVAYETYNDKKYLD----ALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAF 63
G PG I +L N K Y + + GLL SL G AG A +
Sbjct: 35 TGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLL--TGSLYSGAAGIALSI 92
Query: 64 LTAYHTTHAEEQMYRALCFANWVTGY------NKHEDTTPDRPYSLYEGKVGVAFFLLDI 117
L + + +L ++ + + + Y + EG G+ +LL I
Sbjct: 93 LHLREDDEKYKNLLDSL--NRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLI 150
Query: 118 LKPTNAKWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHSYEIKTARSVKMETKHSS 177
I N +++L +E + Y S + +
Sbjct: 151 NDEQYDDLKIL-----IINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLA 205
Query: 178 RHH-------QNKYKYGEGEKSKLFTVENKEKIVLHPSFETK--VWATLTRLIEDIDSEY 228
+ G ++ L ++ I E K + +++ E
Sbjct: 206 HGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEK 265
Query: 229 ETSDKFRDHDYSVYVGTSGQAMFYYIYYQRTHDSKYLDKAQKLIERSLKN-LKNRRFSFL 287
+ D Y G G ++ Y + ++DKA+K++E +++ L +
Sbjct: 266 VIREASFIRDAWCY-GGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYMIC 324
Query: 288 NGDAGPIAVSALIYKALGKQEKLESSVQKLKALAPHLVDLRSDIPD-EILYGRAGYLYSL 346
+G +G + ++K L +K +S +++ + +++ D L G +G + L
Sbjct: 325 HGYSG-LIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVL 383
Query: 347 LFVNKHIKSVNIEASLIRQVVDSILRSG 374
I +L+ + D L+ G
Sbjct: 384 SKFEYSINFTYWRQALL--LFDDFLKGG 409
Score = 47.2 bits (111), Expect = 4e-06
Identities = 43/416 (10%), Positives = 121/416 (29%), Gaps = 68/416 (16%)
Query: 26 DKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANW 85
+K ++ N + +L G+ G + +++ Y+ +
Sbjct: 9 EKIIAQWDERTRKNKENFDF--GELTLSTGLPGIILMLAELKNKDNSKI--YQKKIDN-Y 63
Query: 86 VTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRER 145
+ T SLY G G+A +L + + ++Y N+ +++L ++
Sbjct: 64 IEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDD-----EKYKNL-LDSLNRYIEYFV 117
Query: 146 TDYDTDYKSLML-FHSYEIKTARSVKMETKHSSRHHQNKYKYGEGEKSKLFTVENKEKIV 204
+ + + Y++ S + + L + +
Sbjct: 118 REKIEGFNLENITPPDYDVIEGLS------GILSYLLLINDEQYDDLKILI-INFLSNLT 170
Query: 205 LHPSFETKVWATLTRLIEDIDSEYETSDKFRDHDYSVYVGTSGQAMFYYIYYQRTHDSKY 264
+ ++ + +SE + + G +G + + + ++
Sbjct: 171 KENNGLISLYIKSENQMSQSESEMYPLGCL---NMGLAHGLAGVGCILAYAHIKGYSNEA 227
Query: 265 LDKAQKLIERSLKNLK----------------------------NRRFSFLNGDAGPIAV 296
A + I + + R ++ G G +
Sbjct: 228 SLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLL 287
Query: 297 SALIYKALGKQEKLESSVQKLKALAPHLVDLRSDIPDEILYGRAGYLYSLLFVNKHIKSV 356
AL ++ + + L++ + + S + I +G +G + + + +
Sbjct: 288 YLYGGLALDNDYFVDKAEKILESAMQRKLGIDSYM---ICHGYSGLIEICSLFKRLLNT- 343
Query: 357 NIEASLIRQVVDSILRSGQNLSARKKSRVPLEYEWHDKNYYGAAHGVTGILFTLLK 412
S + + + + + D++ G G++G + L K
Sbjct: 344 KKFDSYMEEFNVNSEQILEEYG--------------DESGTGFLEGISGCILVLSK 385
Score = 40.6 bits (94), Expect = 4e-04
Identities = 41/311 (13%), Positives = 93/311 (29%), Gaps = 39/311 (12%)
Query: 7 CHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHA-----------GLLRKGYSLCHG 55
G+ G + E +D+KY + L + + + + Y + G
Sbjct: 82 YSGAAGIALSILHLRE--DDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEG 139
Query: 56 VAGNAYAFLTAYHTTHAEEQMYRALCFAN----------WVTGYNKHEDTTPDRPYSLYE 105
++G L + + ++ +N + Y L
Sbjct: 140 LSGILSYLLLINDEQYDDLKILIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGC 199
Query: 106 GKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHSYEIKT 165
+G+A L + + Y N + + ++ ++ + K L+ +
Sbjct: 200 LNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDG-LVA 258
Query: 166 ARSVKMETKHSSRHHQNKYKYGEGEKSKLFTVENKEKIVLHPSFETKVWATLTRLIEDID 225
K + + ++ + YG S L+ + + F K L ++
Sbjct: 259 DELKKEKVIREASFIRDAWCYGGPGISLLYL--YGGLALDNDYFVDKAEKILESAMQR-- 314
Query: 226 SEYETSDKFRDHDYSVYVGTSGQAMFYYIYYQRTHDSKYLDKAQKLIERSLKNLKNRR-- 283
K Y + G SG ++ + + K+ ++ S + L+
Sbjct: 315 -------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDE 367
Query: 284 --FSFLNGDAG 292
FL G +G
Sbjct: 368 SGTGFLEGISG 378
Score = 37.5 bits (86), Expect = 0.004
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 587 DKKYLDALLKSSDNVWHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANW 646
+K ++ N + +L G+ G + +++ Y+ +
Sbjct: 9 EKIIAQWDERTRKNKENFDF--GELTLSTGLPGIILMLAELKNKDNSKI--YQKKIDN-Y 63
Query: 647 VTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTNAKFPGYEDI 692
+ T SLY G G+A +L + + + +
Sbjct: 64 IEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDEKYKNLLDSL 109
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis
[TaxId: 1423]}
Length = 363
Score = 38.6 bits (89), Expect = 0.002
Identities = 23/193 (11%), Positives = 46/193 (23%), Gaps = 11/193 (5%)
Query: 456 WCHGSPGFTSLLQVAYETYNDKKYLDALLKSSDNFVSWSFGECEYEWHDKNYYGAAHGVT 515
+ G +L+ +E +K+Y + +D + G + + + A
Sbjct: 31 YHQGV-FLCGVLR-LWEATGEKRYFEYAKAYADLLI-DDNGNLLFRRDELDAIQAGL--- 84
Query: 516 GILFTLLKSNVLTDKERDTLVKPTLDALLDETFPSGNLKSSHGSDSDRLVQWCHGSPGFI 575
L T ER L +L + H W G
Sbjct: 85 ----ILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPY-QMWLDGLYMGG 139
Query: 576 SLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEE 635
+ + D ++ + K H T + E
Sbjct: 140 PFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPE 199
Query: 636 QMYRALCFANWVT 648
R++ +
Sbjct: 200 FWARSIGWYVMSL 212
Score = 34.3 bits (78), Expect = 0.038
Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 27/312 (8%)
Query: 6 WCHGSPGFISLLQVAYETYNDKKYLDALLKSSD-NVWHAG-LLRKGYSLCHGVAGNAYAF 63
+ G F+ + +E +K+Y + +D + G LL + L AG
Sbjct: 31 YHQG--VFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAIQAGLILFP 88
Query: 64 LTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRPYSLYEGKVGVAFFLLDILKPTNA 123
L Y T E Y + + + L P
Sbjct: 89 L--YEQTKDE--RYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGG-PFAL 143
Query: 124 KWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHSYEIKTARSVKMETKHSSRHH--- 180
K+ + + + + D K+ + +H+++ E S
Sbjct: 144 KYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWAR 203
Query: 181 -QNKYKYGEGEKSKLFTVENKEKIVLHPSFETKVWATLTRLIEDIDSE--YETSDKFRDH 237
Y + + ++ ++ + + + D E +
Sbjct: 204 SIGWYVMSLADMIEELPKKHPN----RHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGD 259
Query: 238 DYSVYVGTSGQAMFYYIYYQRTH----DSKYLDKAQK----LIERSLKNLKNRRFSFLNG 289
++ +SG ++ Y + + D Y K LI+ + ++ F +
Sbjct: 260 RSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDI 319
Query: 290 DAGPIAVSALIY 301
G A Y
Sbjct: 320 CVGTSAGFYDYY 331
Score = 29.3 bits (65), Expect = 1.8
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 248 QAMFYYI---YYQRTHDSKYLDKAQKLIERSLKNLKNRRFSFLNGDAGPIAVSALIYKAL 304
Q +F ++ T + +Y + A+ + + + N F DA LI L
Sbjct: 33 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAIQA---GLILFPL 89
Query: 305 GKQEKLESSVQKLKALAPH 323
+Q K E V+ K L
Sbjct: 90 YEQTKDERYVKAAKRLRSL 108
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase
{Bacillus sp. GL1 [TaxId: 84635]}
Length = 377
Score = 36.6 bits (84), Expect = 0.009
Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 22/172 (12%)
Query: 456 WCHGSPGFTSLLQVAYETYNDKKYLDALLKSSDNFVSWSFGECEYEWHDKNY-----YGA 510
W G ++ +L + YE D++Y + +++ +F + HD + A
Sbjct: 42 WTDGF--WSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHDIGFLYSLSAKA 99
Query: 511 AHGVTGILFTLLKSNVLTDKERDTLVKPTLDALLDETFPSGNLKSSHGSDSDRLVQWCHG 570
V D+ L D L+ + + G D
Sbjct: 100 QWIVEK------------DESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRII 147
Query: 571 SPGFISL--LQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVSGN 620
++L L A E D +Y + L+R S H +
Sbjct: 148 IDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKS-RRFLVRGDDSSYHTFYFD 198
Score = 27.7 bits (61), Expect = 4.6
Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Query: 6 WCHGSPGFISLLQVAYETYNDKKYLDALLKSSDNVWHAGLLRKGYSLCHGVAGNAYAFLT 65
W G + +L + YE D++Y + +++ + + + +
Sbjct: 42 WTDGF--WSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHDIGFLYSLSAKA 99
Query: 66 AYHTTHAEEQMYRALCFANWVTGY 89
+ E AL A+ +
Sbjct: 100 QWIVEKDESARKLALDAADVLMRR 123
Score = 27.3 bits (60), Expect = 6.7
Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 253 YIYYQRTHDSKYLDKAQKLIERSLKNLKNRRFSFLNGDAGPIAVSAL-IYKALGKQEKLE 311
++ Y+ T D +Y + A + + + L + ++SA + + +
Sbjct: 52 WLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHDIGFLYSLSAKAQWIVEKDESARK 111
Query: 312 SSVQKLKALA 321
++ L
Sbjct: 112 LALDAADVLM 121
>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 255
Score = 30.8 bits (68), Expect = 0.42
Identities = 17/161 (10%), Positives = 36/161 (22%), Gaps = 15/161 (9%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
W L G LC G + LTA H ++
Sbjct: 14 WQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQ 73
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHS 160
++ ++ + N IA + T+Y + +
Sbjct: 74 A---------------VVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPA 118
Query: 161 YEIKTARSVKMETKHSSRHHQNKYKYGEGEKSKLFTVENKE 201
+ G +++++ + N
Sbjct: 119 AGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDV 159
Score = 28.1 bits (61), Expect = 3.5
Identities = 10/56 (17%), Positives = 13/56 (23%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTT 657
W L G LC G + LTA H ++
Sbjct: 14 WQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQ 69
>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 235
Score = 30.8 bits (68), Expect = 0.51
Identities = 5/61 (8%), Positives = 13/61 (21%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
W L +C + ++A H + + + +
Sbjct: 14 WVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLHMASNLTSPQIETR 73
Query: 101 Y 101
Sbjct: 74 L 74
Score = 29.6 bits (65), Expect = 0.99
Identities = 5/61 (8%), Positives = 13/61 (21%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
W L +C + ++A H + + + +
Sbjct: 14 WVVALYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPSKWKAVLGLHMASNLTSPQIETR 73
Query: 662 Y 662
Sbjct: 74 L 74
>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo
sapiens) [TaxId: 9606]}
Length = 225
Score = 30.5 bits (67), Expect = 0.60
Identities = 13/97 (13%), Positives = 30/97 (30%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
+ A + +G C G +A +TA ++ + + + +
Sbjct: 14 FLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSI 73
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENL 137
S+ E L D++ + ++ I L
Sbjct: 74 SSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPL 110
Score = 28.6 bits (62), Expect = 2.3
Identities = 11/77 (14%), Positives = 24/77 (31%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
+ A + +G C G +A +TA ++ + + + +
Sbjct: 14 FLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSI 73
Query: 662 YSLYEGKVGVAFFLLDI 678
S+ E L D+
Sbjct: 74 SSMSENGYDPQQNLNDL 90
>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/146 (10%), Positives = 33/146 (22%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
+ A + G LC GV L+A H + + D
Sbjct: 14 YMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVL 73
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHS 160
++ D+L ++ P + D + +
Sbjct: 74 RAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNH 133
Query: 161 YEIKTARSVKMETKHSSRHHQNKYKY 186
+ + R N+ +
Sbjct: 134 AGRRPDSLQHVLLPVLDRATCNRRTH 159
Score = 27.0 bits (58), Expect = 6.3
Identities = 9/45 (20%), Positives = 13/45 (28%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANW 646
+ A + G LC GV L+A H +
Sbjct: 14 YMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAH 58
>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein)
{Horse (Equus caballus) [TaxId: 9796]}
Length = 237
Score = 29.7 bits (65), Expect = 1.2
Identities = 10/68 (14%), Positives = 23/68 (33%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
W + +G+ C GV + LTA H + Q++ + + +
Sbjct: 14 WQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDEDTAQFHQVSDSFL 73
Query: 101 YSLYEGKV 108
++ +
Sbjct: 74 DPQFDLSL 81
Score = 29.3 bits (64), Expect = 1.2
Identities = 10/68 (14%), Positives = 23/68 (33%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
W + +G+ C GV + LTA H + Q++ + + +
Sbjct: 14 WQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDEDTAQFHQVSDSFL 73
Query: 662 YSLYEGKV 669
++ +
Sbjct: 74 DPQFDLSL 81
>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum)
[TaxId: 5507]}
Length = 224
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/53 (20%), Positives = 15/53 (28%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHE 93
+ + R G C G NA LTA H Q + +
Sbjct: 14 FIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGIT 66
Score = 28.5 bits (62), Expect = 2.1
Identities = 11/53 (20%), Positives = 15/53 (28%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHE 654
+ + R G C G NA LTA H Q + +
Sbjct: 14 FIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGIT 66
>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 254
Score = 29.0 bits (63), Expect = 1.5
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYH 68
W LL G LC G N ++A H
Sbjct: 14 WQVLLLVNGAQLCGGTLINTIWVVSAAH 41
Score = 29.0 bits (63), Expect = 2.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYH 629
W LL G LC G N ++A H
Sbjct: 14 WQVLLLVNGAQLCGGTLINTIWVVSAAH 41
>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 28.8 bits (63), Expect = 1.6
Identities = 13/64 (20%), Positives = 20/64 (31%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
+ A L G+ LC GV + LTA H Q++ +
Sbjct: 14 YQAALYTSGHLLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVI 73
Query: 101 YSLY 104
+ Y
Sbjct: 74 HPDY 77
Score = 28.5 bits (62), Expect = 2.5
Identities = 13/64 (20%), Positives = 20/64 (31%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
+ A L G+ LC GV + LTA H Q++ +
Sbjct: 14 YQAALYTSGHLLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVI 73
Query: 662 YSLY 665
+ Y
Sbjct: 74 HPDY 77
>d1iyjb2 a.171.1.1 (B:2761-2897) BRCA2 tower domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 137
Score = 27.9 bits (62), Expect = 1.8
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 167 RSVKMETKHSSRHHQNKYKYGEGEKSKL 194
R+ + E K + R + + K E +K+
Sbjct: 12 RNEREEEKEALRFAEAQQKKLEALFTKV 39
>g2pka.1 b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [TaxId:
9823]}
Length = 232
Score = 28.8 bits (63), Expect = 1.9
Identities = 14/108 (12%), Positives = 29/108 (26%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
W + C GV N LTA H + +++ + T D P
Sbjct: 14 WQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNYEVWLGRHNLFENENTAQFFGVTADFP 73
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRERTDY 148
+ + + D++ + + + L +
Sbjct: 74 HPGFNLSADGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTC 121
Score = 28.0 bits (61), Expect = 3.5
Identities = 13/78 (16%), Positives = 24/78 (30%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
W + C GV N LTA H + +++ + T D P
Sbjct: 14 WQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNYEVWLGRHNLFENENTAQFFGVTADFP 73
Query: 662 YSLYEGKVGVAFFLLDIL 679
+ + + D++
Sbjct: 74 HPGFNLSADGKDYSHDLM 91
>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire
ant (Solenopsis invicta) [TaxId: 13686]}
Length = 222
Score = 28.6 bits (62), Expect = 1.9
Identities = 8/45 (17%), Positives = 11/45 (24%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANW 85
+ L G C + LTA H + R
Sbjct: 14 YQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGT 58
Score = 28.6 bits (62), Expect = 2.5
Identities = 8/45 (17%), Positives = 11/45 (24%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANW 646
+ L G C + LTA H + R
Sbjct: 14 YQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGT 58
>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake
(Agkistrodon acutus) [TaxId: 36307]}
Length = 234
Score = 28.5 bits (62), Expect = 2.4
Identities = 8/52 (15%), Positives = 14/52 (26%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 92
+ C G N +TA H + QM + + +
Sbjct: 14 FLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSKKVLNEDEQT 65
Score = 28.2 bits (61), Expect = 3.1
Identities = 8/52 (15%), Positives = 14/52 (26%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 653
+ C G N +TA H + QM + + +
Sbjct: 14 FLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSKKVLNEDEQT 65
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS)
C-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 26.2 bits (58), Expect = 2.7
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 262 SKYLDKAQKLIERSLKNLKNRRFSFLNGDAGPIAVSALIYKALGKQEKLESSVQKLKA 319
K L + L ERS + L + F + P V + + ++ ++++
Sbjct: 10 EKRLKELLALAERSQRKLASPGFR----EKAPKEV---VEAEEARLKENLEQAERIRE 60
>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 218
Score = 27.8 bits (60), Expect = 3.5
Identities = 5/52 (9%), Positives = 11/52 (21%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 92
+ L +G C ++A H + +
Sbjct: 14 FMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREP 65
Score = 27.4 bits (59), Expect = 4.6
Identities = 5/52 (9%), Positives = 11/52 (21%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 653
+ L +G C ++A H + +
Sbjct: 14 FMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREP 65
>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 223
Score = 27.7 bits (60), Expect = 3.9
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
+ L GY C G N ++A H + Q+ N + G + +
Sbjct: 14 YQVSL-NSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIK 72
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQ 127
+ ++ + +L L +
Sbjct: 73 HPNFDRETYNNDIMLIKLSSPVKLNAR 99
Score = 26.9 bits (58), Expect = 6.7
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 661
+ L GY C G N ++A H + Q+ N + G + +
Sbjct: 14 YQVSL-NSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIK 72
Query: 662 YSLYEGKVGVAFFLLDILKP 681
+ ++ + +L L
Sbjct: 73 HPNFDRETYNNDIMLIKLSS 92
>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 225
Score = 27.7 bits (60), Expect = 4.0
Identities = 10/52 (19%), Positives = 15/52 (28%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 92
W A L + +C GV LTA H + + +
Sbjct: 14 WQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSLQSRDQPEQE 65
Score = 27.3 bits (59), Expect = 5.2
Identities = 10/52 (19%), Positives = 15/52 (28%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 653
W A L + +C GV LTA H + + +
Sbjct: 14 WQAALFQGERLICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSLQSRDQPEQE 65
>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 235
Score = 27.7 bits (60), Expect = 4.0
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANW 85
W L K + C G N +TA H ++ N
Sbjct: 14 WQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNI 58
Score = 27.3 bits (59), Expect = 5.1
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANW 646
W L K + C G N +TA H ++ N
Sbjct: 14 WQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNI 58
>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler
crab (Uca pugilator) [TaxId: 6772]}
Length = 226
Score = 27.7 bits (60), Expect = 4.2
Identities = 8/28 (28%), Positives = 9/28 (32%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYH 68
A L C G + LTA H
Sbjct: 14 HQAALFIDDMYFCGGSLISPEWILTAAH 41
Score = 27.3 bits (59), Expect = 5.4
Identities = 8/28 (28%), Positives = 9/28 (32%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYH 629
A L C G + LTA H
Sbjct: 14 HQAALFIDDMYFCGGSLISPEWILTAAH 41
>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 237
Score = 27.3 bits (59), Expect = 5.3
Identities = 18/144 (12%), Positives = 39/144 (27%), Gaps = 14/144 (9%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKHEDTTPDRP 100
W + + +C GV + LTA H C+ + + + P
Sbjct: 14 WQVAVYYQKEHICGGVLLDRNWVLTAAH------------CYVDQYEVWLGKNKLFQEEP 61
Query: 101 YSLYEGKVGVAFFLLDILKPTNAKWNQEYPNINIENLIAHLMRERTDYDTDYKSLMLFHS 160
+ + ++ F + P + + + L + TD + +
Sbjct: 62 SAQH--RLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPT 119
Query: 161 YEIKTARSVKMETKHSSRHHQNKY 184
E K S + +
Sbjct: 120 KEPKPGSKCLASGWGSITPTRWQK 143
Score = 26.5 bits (57), Expect = 9.6
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYH 629
W + + +C GV + LTA H
Sbjct: 14 WQVAVYYQKEHICGGVLLDRNWVLTAAH 41
>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 228
Score = 27.0 bits (58), Expect = 6.5
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 92
WH + R C GV + LTA H + + Q++ ++H
Sbjct: 5 WHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQH 56
Score = 26.6 bits (57), Expect = 9.9
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 653
WH + R C GV + LTA H + + Q++ ++H
Sbjct: 5 WHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQH 56
>d1wb9a4 d.75.2.1 (A:2-116) DNA repair protein MutS, domain I
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 26.0 bits (57), Expect = 6.6
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 312 SSVQKLKALAP---HLVDLRSDIPDEILYGRAGYLYSLLFVNKHIKSVNIEASLIRQ 365
S+++ A P + L++ P+ +L+ R G Y+L + + S ++ SL ++
Sbjct: 1 SAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYTLFYDDAKRASQLLDISLTKR 57
>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId:
9606]}
Length = 232
Score = 27.0 bits (58), Expect = 8.2
Identities = 8/52 (15%), Positives = 13/52 (25%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 92
+ L ++C G LTA H + + K
Sbjct: 14 YMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQ 65
Score = 26.6 bits (57), Expect = 9.9
Identities = 8/52 (15%), Positives = 13/52 (25%)
Query: 602 WHAGLLRKGYSLCHGVSGNAYAFLTAYHTTHAEEQMYRALCFANWVTGYNKH 653
+ L ++C G LTA H + + K
Sbjct: 14 YMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQ 65
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella
typhimurium [TaxId: 90371]}
Length = 411
Score = 27.0 bits (59), Expect = 8.3
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 252 YYIYYQRTHDSKYLDKAQKLIERSLKNLKNRR----FSFLNGDAGPIA 295
Y Y T DS+Y + QK + +K L + + L+ D
Sbjct: 324 AYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTT 371
>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId:
9606]}
Length = 240
Score = 26.6 bits (57), Expect = 10.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 41 WHAGLLRKGYSLCHGVAGNAYAFLTAYH 68
+ A + G+ +C GV + LTA H
Sbjct: 16 FMASIQYGGHHVCGGVLIDPQWVLTAAH 43
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.407
Gapped
Lambda K H
0.267 0.0432 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,608,106
Number of extensions: 119994
Number of successful extensions: 429
Number of sequences better than 10.0: 1
Number of HSP's gapped: 404
Number of HSP's successfully gapped: 73
Length of query: 692
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 600
Effective length of database: 1,144,436
Effective search space: 686661600
Effective search space used: 686661600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.1 bits)