Query psy13781
Match_columns 155
No_of_seqs 181 out of 577
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:21:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lw6_A FI08434P, beta-4-galact 100.0 2.7E-30 9.2E-35 212.4 4.2 144 9-154 116-277 (287)
2 2fy7_A Beta-1,4-galactosyltran 99.9 8.7E-28 3E-32 197.7 4.1 118 38-155 165-285 (287)
3 1xhb_A Polypeptide N-acetylgal 97.5 0.00015 5.2E-09 61.5 6.0 47 48-94 205-251 (472)
4 2d7i_A Polypeptide N-acetylgal 97.2 0.00026 8.8E-09 62.2 4.8 47 48-94 285-331 (570)
5 2fy7_A Beta-1,4-galactosyltran 97.2 6.2E-05 2.1E-09 61.3 0.3 47 13-59 238-284 (287)
6 2z86_A Chondroitin synthase; G 97.2 0.00024 8.2E-09 62.3 3.9 49 47-95 276-324 (625)
7 2ffu_A Ppgalnact-2, polypeptid 97.0 0.00059 2E-08 58.5 4.9 47 48-94 237-283 (501)
8 2nxv_A ATP synthase subunits r 96.4 0.0034 1.2E-07 49.0 4.5 43 49-94 155-197 (249)
9 3bcv_A Putative glycosyltransf 95.7 0.0061 2.1E-07 46.0 2.9 51 49-100 173-224 (240)
10 3lw6_A FI08434P, beta-4-galact 95.2 0.011 3.8E-07 48.4 3.1 35 14-48 226-260 (287)
11 4fix_A UDP-galactofuranosyl tr 93.6 0.047 1.6E-06 49.0 3.8 44 49-94 367-410 (657)
12 2z86_A Chondroitin synthase; G 92.1 0.071 2.4E-06 46.4 2.6 84 50-138 524-611 (625)
13 1qg8_A Protein (spore coat pol 88.4 0.076 2.6E-06 40.2 -0.4 44 49-95 158-208 (255)
14 4hg6_A Cellulose synthase subu 81.1 0.91 3.1E-05 41.4 3.1 46 47-95 317-362 (802)
15 3l7i_A Teichoic acid biosynthe 69.9 0.93 3.2E-05 40.5 0.0 43 49-93 154-197 (729)
16 1gwm_A NCP1, non-catalytic pro 49.3 6.6 0.00022 28.3 1.4 22 51-74 7-28 (153)
17 1wcu_A CBM29_1, non-catalytic 48.7 5.8 0.0002 28.6 1.0 13 60-74 15-27 (153)
18 3ckj_A Putative uncharacterize 36.8 28 0.00096 27.5 3.5 39 49-92 215-255 (329)
19 4bby_A Alkyldihydroxyacetoneph 34.9 9.1 0.00031 34.1 0.3 14 67-80 91-104 (658)
20 3f1y_A Mannosyl-3-phosphoglyce 23.0 48 0.0016 27.3 2.7 40 49-93 260-301 (387)
21 2v6x_B DOA4-independent degrad 20.1 44 0.0015 20.2 1.4 12 74-85 38-49 (54)
No 1
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=99.96 E-value=2.7e-30 Score=212.37 Aligned_cols=144 Identities=23% Similarity=0.292 Sum_probs=119.3
Q ss_pred cccccCCC--hhhhHHHHhc----ccccccccccceeeEeeeccCcceeEEeeehhcccccCCCCCcccCCCCChhHHHH
Q psy13781 9 CRQVNRVL--YSRYEKLYSG----HKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNR 82 (155)
Q Consensus 9 ~~~~n~~n--~~R~~~L~~~----~~r~~~DGLnsl~Yk~~~~~~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~R 82 (155)
|--.+++. |..-.+++.. .+++.+.. .+.|++++...+|+++++++++|++||||||.|||||+||+||+.|
T Consensus 116 ~~ifHDVDLlP~dd~n~Y~c~~~~~P~Hls~~--~~~~~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~R 193 (287)
T 3lw6_A 116 YIAMHDVDLLPLNDNLLYEYPSSLGPLHIAGP--KLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVR 193 (287)
T ss_dssp EEEEECTTEEECCTTSCCCCCCTTCCEESSCT--TTCSSCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHH
T ss_pred EEEEecccccccCCCccccCCCCCCceEEeec--cccCCCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHH
Confidence 44444444 5555555542 46666653 4667888999999999999999999999999999999999999999
Q ss_pred HHhcCceEEecCC-CceeEeeeecCCC-----CCChhhHHHHhhcCeeeccCCCceeeEEEeEEEee------ccEEEEE
Q psy13781 83 VKAAGLQIIRYPP-DIAKYSMLRHRKE-----KANPQRYEKLYSGHKRYKKDGLTSLKYKVIDTKQH------KLFTWFL 150 (155)
Q Consensus 83 l~~~g~~i~r~~~-~~~~y~~i~H~~~-----~~n~~r~~~l~~~~~~~~~dGL~sl~Y~~~~~~~~------~lyt~i~ 150 (155)
+..+|+++.||+. .+|+|+|+.|.+. +.++.|+.++..+.+|+..||||||+|++++++.- .+++||.
T Consensus 194 l~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl~Y~v~s~~~~~i~~~~~~~~nv~ 273 (287)
T 3lw6_A 194 IRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNVKYKILKVHEMLIDQVPVTILNIL 273 (287)
T ss_dssp HHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGCCEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeeeEEEEEEEEEEEecCCCcEEEEEE
Confidence 9999999999986 7999999998432 24566888888999999999999999999998877 8999999
Q ss_pred EEec
Q psy13781 151 VQLG 154 (155)
Q Consensus 151 vdi~ 154 (155)
++..
T Consensus 274 l~c~ 277 (287)
T 3lw6_A 274 LDCD 277 (287)
T ss_dssp ECCC
T ss_pred EEcC
Confidence 8754
No 2
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.94 E-value=8.7e-28 Score=197.75 Aligned_cols=118 Identities=32% Similarity=0.596 Sum_probs=102.8
Q ss_pred eeeEeeeccCcceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecCCCceeEeeeecCC---CCCChhh
Q psy13781 38 LKYKVIDTKQHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRK---EKANPQR 114 (155)
Q Consensus 38 l~Yk~~~~~~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~~~~~y~~i~H~~---~~~n~~r 114 (155)
+.|+.+.....++++++++++|.+|||||+.|+|||+||.||..|+..+|+++.+++...++|.|+.|.+ .+.|++|
T Consensus 165 ~~~~~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~ 244 (287)
T 2fy7_A 165 FGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQR 244 (287)
T ss_dssp GTTSCSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCC
T ss_pred cccCCCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHH
Confidence 3444444556679999999999999999999999999999999999999999999988889999999954 3568889
Q ss_pred HHHHhhcCeeeccCCCceeeEEEeEEEeeccEEEEEEEecC
Q psy13781 115 YEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLGE 155 (155)
Q Consensus 115 ~~~l~~~~~~~~~dGL~sl~Y~~~~~~~~~lyt~i~vdi~~ 155 (155)
++.+.+++.+|+.+||+++.|++++++.+||||||+|||++
T Consensus 245 ~~~l~~~~~~~~~~Gl~~~~y~~~~~~~~~l~t~~~v~~~~ 285 (287)
T 2fy7_A 245 FDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIGT 285 (287)
T ss_dssp CCCHHHHHHHTTTSSGGGCCCEEEEEEEETTEEEEEEECCC
T ss_pred HHHHhhcccEEcCCCcccCceEEEEEEeccCeEEEEEEecC
Confidence 98888889999999999999999999999999999999984
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=97.47 E-value=0.00015 Score=61.50 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=42.9
Q ss_pred cceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecC
Q psy13781 48 HKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 94 (155)
Q Consensus 48 ~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~ 94 (155)
.+..+.|.++.|.+++||++.|..||+||.||..|+...|.++...+
T Consensus 205 ~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p 251 (472)
T 1xhb_A 205 AGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT 251 (472)
T ss_dssp CSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred cceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEcc
Confidence 35678999999999999999999999999999999999999988653
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=97.24 E-value=0.00026 Score=62.24 Aligned_cols=47 Identities=19% Similarity=0.160 Sum_probs=43.3
Q ss_pred cceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecC
Q psy13781 48 HKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 94 (155)
Q Consensus 48 ~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~ 94 (155)
.+..+.|.++.|.+|+||++.|..||+||.||..|+...|.++...+
T Consensus 285 ~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 285 AGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIP 331 (570)
T ss_dssp CSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEcc
Confidence 35778999999999999999999999999999999999999988754
No 5
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=97.18 E-value=6.2e-05 Score=61.30 Aligned_cols=47 Identities=30% Similarity=0.534 Sum_probs=42.2
Q ss_pred cCCChhhhHHHHhcccccccccccceeeEeeeccCcceeEEeeehhc
Q psy13781 13 NRVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQHKLFTWFLVQLG 59 (155)
Q Consensus 13 n~~n~~R~~~L~~~~~r~~~DGLnsl~Yk~~~~~~~gl~t~i~~~~f 59 (155)
+++||+|+..+.+.+.+|..+||+++.|++++...+++||+|+++..
T Consensus 238 ~~~n~~~~~~l~~~~~~~~~~Gl~~~~y~~~~~~~~~l~t~~~v~~~ 284 (287)
T 2fy7_A 238 NEPNPQRFDRIAHTKETMLSDGLNSLTYQVLDVQRYPLYTQITVDIG 284 (287)
T ss_dssp ---CCCCCCCHHHHHHHTTTSSGGGCCCEEEEEEEETTEEEEEEECC
T ss_pred cCCCHHHHHHHhhcccEEcCCCcccCceEEEEEEeccCeEEEEEEec
Confidence 67899999999999999999999999999999999999999999873
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.17 E-value=0.00024 Score=62.25 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=44.8
Q ss_pred CcceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecCC
Q psy13781 47 QHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 95 (155)
Q Consensus 47 ~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~ 95 (155)
..++.+.+.++.|.+++||++.|..||+||.||..|+..+|.++...+.
T Consensus 276 ~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 324 (625)
T 2z86_A 276 FSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEG 324 (625)
T ss_dssp CCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGG
T ss_pred EeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEccc
Confidence 4567899999999999999999999999999999999999999887654
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=97.02 E-value=0.00059 Score=58.51 Aligned_cols=47 Identities=21% Similarity=0.137 Sum_probs=43.2
Q ss_pred cceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecC
Q psy13781 48 HKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 94 (155)
Q Consensus 48 ~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~ 94 (155)
.+..+.|.++.|.+|.||++.|..||+||.||..|+...|.++...+
T Consensus 237 ~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 237 AGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp CSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred cceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEcc
Confidence 35688999999999999999999999999999999999999988754
No 8
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=96.36 E-value=0.0034 Score=49.05 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=36.5
Q ss_pred ceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecC
Q psy13781 49 KLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 94 (155)
Q Consensus 49 gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~ 94 (155)
++.+.+.++. ++||++.+.||..||.|+..|+..+|.++.-.+
T Consensus 155 g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p 197 (249)
T 2nxv_A 155 ECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAID 197 (249)
T ss_dssp TTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECC
T ss_pred eEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEec
Confidence 3556666666 779999999999999999999999999988763
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=95.66 E-value=0.0061 Score=45.99 Aligned_cols=51 Identities=20% Similarity=0.115 Sum_probs=38.9
Q ss_pred ceeEEeeehhccccc-CCCCCcccCCCCChhHHHHHHhcCceEEecCCCceeE
Q psy13781 49 KLFTWFLVQLGELVN-GFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKY 100 (155)
Q Consensus 49 gl~t~i~~~~f~~vN-Gf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~~~~~y 100 (155)
++.+.+.++.+.+++ ||++.+. +.+||.||..|+..+|.++...+.....|
T Consensus 173 ~~~~~~rr~~~~~~g~~f~~~~~-~~~eD~~~~~r~~~~g~~i~~~~~~~~~y 224 (240)
T 3bcv_A 173 AKVVLYRRNLIEKKHLRFVSERI-LPSEDLIFNVDVLANSNIVCVLPQTFYNY 224 (240)
T ss_dssp CSCEEEEHHHHHHTTCCCCCTTT-CTTHHHHHHHHHHTTCSCEEECC------
T ss_pred hhheeeeHHHHHHcCCccCCCCC-ccCCCHHHHHHHHHhCCEEEEECCCeEEE
Confidence 467799999999999 9999865 34599999999999999998876544444
No 10
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=95.17 E-value=0.011 Score=48.39 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=31.6
Q ss_pred CCChhhhHHHHhcccccccccccceeeEeeeccCc
Q psy13781 14 RVLYSRYEKLYSGHKRYKKDGLTSLKYKVIDTKQH 48 (155)
Q Consensus 14 ~~n~~R~~~L~~~~~r~~~DGLnsl~Yk~~~~~~~ 48 (155)
+.+++|++++..+.+|+..||||+++|++++....
T Consensus 226 rd~~k~~~~~~~~~~r~~~dGLnsl~Y~v~s~~~~ 260 (287)
T 3lw6_A 226 RDTQKCFNQKEMTRKRDHKTGLDNVKYKILKVHEM 260 (287)
T ss_dssp CCCCCCTTHHHHHTSCCSSCSGGGCCEEEEEEEEE
T ss_pred CcccchhhhhhhhcEEccCCCCeeeEEEEEEEEEE
Confidence 45688999999999999999999999999887766
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=93.62 E-value=0.047 Score=49.03 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=38.0
Q ss_pred ceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecC
Q psy13781 49 KLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 94 (155)
Q Consensus 49 gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~ 94 (155)
++.+.|.++.|.+|+||++.|-.| ||.|+..|+..+|.++...+
T Consensus 367 g~~~lirr~v~~~vGgfd~~F~~~--ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 367 WWTCMIPRQVAEELGQPLPLFIKW--DDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp TTEEEEEHHHHHHHCSCCSCSSSS--HHHHHHHHHHHTTCCEEEEE
T ss_pred hhHhHhhHHHHHHhCCChhHhccC--cHHHHHHHHHHcCCeEEEEC
Confidence 467899999999999999666554 99999999999999987654
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=92.08 E-value=0.071 Score=46.45 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=51.1
Q ss_pred eeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecCCCceeEeeeecCCCCC--Ch--hhHHHHhhcCeee
Q psy13781 50 LFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKA--NP--QRYEKLYSGHKRY 125 (155)
Q Consensus 50 l~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~~~~~y~~i~H~~~~~--n~--~r~~~l~~~~~~~ 125 (155)
..+.+.++.+.++.||++.|. +.||.||..|+...| ++...+.....| -.|..+.. +. ++...++......
T Consensus 524 ~~~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~--r~h~~~~s~~~~~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 524 HFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHINKICYNR--VLHGENTSIKKLDIQKENHFKVVNESL 598 (625)
T ss_dssp SCEEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEE--ECC----CCSSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEE--EECCCccchhhHHHHHHHHHHHHHHHH
Confidence 456789999999999999987 459999999999999 776654322222 34532221 11 1111222222234
Q ss_pred ccCCCceeeEEEe
Q psy13781 126 KKDGLTSLKYKVI 138 (155)
Q Consensus 126 ~~dGL~sl~Y~~~ 138 (155)
...|+....|...
T Consensus 599 ~~~~~~~~~~~~~ 611 (625)
T 2z86_A 599 SRLGIKKYKYSPL 611 (625)
T ss_dssp TTTTCCSEEEEES
T ss_pred HHcCCchhhcCcc
Confidence 5667777666654
No 13
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=88.35 E-value=0.076 Score=40.24 Aligned_cols=44 Identities=16% Similarity=0.036 Sum_probs=34.6
Q ss_pred ceeEEeeehhccccc-CC------CCCcccCCCCChhHHHHHHhcCceEEecCC
Q psy13781 49 KLFTWFLVQLGELVN-GF------SNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 95 (155)
Q Consensus 49 gl~t~i~~~~f~~vN-Gf------~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~ 95 (155)
+..+.+.++.+.+++ || ++.+ +++||.||..|+...| ++...+.
T Consensus 158 ~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~ 208 (255)
T 1qg8_A 158 HCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDE 208 (255)
T ss_dssp GGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEE
T ss_pred cceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEecC
Confidence 456789999999999 89 5555 5689999999999987 4554433
No 14
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=81.08 E-value=0.91 Score=41.38 Aligned_cols=46 Identities=13% Similarity=0.102 Sum_probs=39.5
Q ss_pred CcceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHhcCceEEecCC
Q psy13781 47 QHKLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 95 (155)
Q Consensus 47 ~~gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~~g~~i~r~~~ 95 (155)
..|..+.+.++.+.+++||++... .||.|+..|+...|.++.-.+.
T Consensus 317 ~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~~~ 362 (802)
T 4hg6_A 317 FCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYIDR 362 (802)
T ss_dssp CCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEECCC
T ss_pred ecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEecC
Confidence 346788999999999999998776 4999999999999998876543
No 15
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=69.91 E-value=0.93 Score=40.49 Aligned_cols=43 Identities=9% Similarity=-0.079 Sum_probs=0.0
Q ss_pred ceeEEeeehhccccc-CCCCCcccCCCCChhHHHHHHhcCceEEec
Q psy13781 49 KLFTWFLVQLGELVN-GFSNEYWGWGGEDDDMSNRVKAAGLQIIRY 93 (155)
Q Consensus 49 gl~t~i~~~~f~~vN-Gf~n~~~GwG~EDddl~~Rl~~~g~~i~r~ 93 (155)
++.+.+.++.+.+++ ||++.+. .+||.||..|+...|.++...
T Consensus 154 ~~~~~~rr~~l~~~gl~fde~~~--~~ED~d~~~rl~~~g~~i~~~ 197 (729)
T 3l7i_A 154 ACNIIFRTAIVRAHHIRFNENLN--TYVDWSFVLEYMKYVNKFVRI 197 (729)
T ss_dssp ----------------------------------------------
T ss_pred hhheeeeHHHHHHcCCCcCCCCC--cccCHHHHHHHHHhcCCEEEe
Confidence 466789999999999 9999983 379999999999999888776
No 16
>1gwm_A NCP1, non-catalytic protein 1; carbohydrate binding domain, glucomannan, cellohexaose, mannohexaose, cellulosome; HET: GLC BGC; 1.15A {Piromyces equi} SCOP: b.18.1.19 PDB: 1gwk_A* 1gwl_A* 1w90_A 1w8t_A* 1w8u_A* 1w8w_A 1w8z_A 1w9f_A 1oh3_A*
Probab=49.25 E-value=6.6 Score=28.31 Aligned_cols=22 Identities=41% Similarity=1.014 Sum_probs=12.4
Q ss_pred eEEeeehhcccccCCCCCcccCCC
Q psy13781 51 FTWFLVQLGELVNGFSNEYWGWGG 74 (155)
Q Consensus 51 ~t~i~~~~f~~vNGf~n~~~GwG~ 74 (155)
|+-+...---.-|||+| ||||-
T Consensus 7 YsVi~~~~~~L~~G~DN--WGW~~ 28 (153)
T 1gwm_A 7 YTVIFKNASGLPNGYDN--WGWGC 28 (153)
T ss_dssp EEEEESSCSSSCTTEEE--CCBSE
T ss_pred EEEEEeccCcCCCCccc--cccCc
Confidence 33343333344577776 88884
No 17
>1wcu_A CBM29_1, non-catalytic protein 1; carbohydrate binding, carbohydrate binding module; 1.5A {Piromyces equi}
Probab=48.72 E-value=5.8 Score=28.60 Aligned_cols=13 Identities=54% Similarity=1.467 Sum_probs=8.8
Q ss_pred ccccCCCCCcccCCC
Q psy13781 60 ELVNGFSNEYWGWGG 74 (155)
Q Consensus 60 ~~vNGf~n~~~GwG~ 74 (155)
-.-|||+| ||||-
T Consensus 15 ~L~~G~DN--WGW~~ 27 (153)
T 1wcu_A 15 KLNSGFDN--WGWDS 27 (153)
T ss_dssp SCCTTEEE--CCBSE
T ss_pred cCCCCccc--cccCc
Confidence 34577776 88884
No 18
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=36.82 E-value=28 Score=27.47 Aligned_cols=39 Identities=21% Similarity=0.076 Sum_probs=30.6
Q ss_pred ceeEEeeehhcccccCCCCCcccCCCCChhHHHHHHh-cCce-EEe
Q psy13781 49 KLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRVKA-AGLQ-IIR 92 (155)
Q Consensus 49 gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl~~-~g~~-i~r 92 (155)
++.+.+.++.+.++. |++.| + ||.||..|+.. .|+. |..
T Consensus 215 ~g~~~~rr~~l~~i~-f~~~~---~-~D~~l~~r~~~~~g~~~i~~ 255 (329)
T 3ckj_A 215 GGEYAATRELLTSVP-FAPGY---G-VEIGLLVDTFDRLGLDAIAQ 255 (329)
T ss_dssp CSCEEEEHHHHTTSC-BCCGG---G-HHHHHHHHHHHHHCGGGEEE
T ss_pred ccceeeeHHHHHhCC-CCCCC---c-ccHHHHHHHHHhcCCccEee
Confidence 467799999999995 87654 4 99999999876 6764 554
No 19
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=34.87 E-value=9.1 Score=34.06 Aligned_cols=14 Identities=29% Similarity=0.674 Sum_probs=11.4
Q ss_pred CCcccCCCCChhHH
Q psy13781 67 NEYWGWGGEDDDMS 80 (155)
Q Consensus 67 n~~~GwG~EDddl~ 80 (155)
-.+||||.+|.+|.
T Consensus 91 ~~w~gwg~~~~~~~ 104 (658)
T 4bby_A 91 MKWNGWGYNDSKFF 104 (658)
T ss_dssp BCTTSSSBTTCCEE
T ss_pred ceecccCccccccc
Confidence 47889999998864
No 20
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=22.97 E-value=48 Score=27.34 Aligned_cols=40 Identities=18% Similarity=0.041 Sum_probs=31.5
Q ss_pred ceeEEeeehhcccccCCCCCcccCCCCChhHHHHH-HhcCce-EEec
Q psy13781 49 KLFTWFLVQLGELVNGFSNEYWGWGGEDDDMSNRV-KAAGLQ-IIRY 93 (155)
Q Consensus 49 gl~t~i~~~~f~~vNGf~n~~~GwG~EDddl~~Rl-~~~g~~-i~r~ 93 (155)
+++.+|.++.+.++ +|+ .||| +|.+|..|+ ...|++ |...
T Consensus 260 sG~~a~rR~~l~~i-~f~---~gyg-~e~ell~~~~~~~G~~~I~eV 301 (387)
T 3f1y_A 260 AGEFVADRELFCSI-PFL---TGYA-VETGIMIDVLKKVGLGAMAQV 301 (387)
T ss_dssp CSCEEEEHHHHTTS-CEE---CSTT-HHHHHHHHHHHHHCGGGEEEE
T ss_pred cccEEEEHHHHHhC-CCC---CCcc-hHHHHHHHHHHhcCCCeEEEE
Confidence 57889999999999 897 4676 568888886 567987 7764
No 21
>2v6x_B DOA4-independent degradation protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=20.14 E-value=44 Score=20.22 Aligned_cols=12 Identities=33% Similarity=0.684 Sum_probs=9.9
Q ss_pred CCChhHHHHHHh
Q psy13781 74 GEDDDMSNRVKA 85 (155)
Q Consensus 74 ~EDddl~~Rl~~ 85 (155)
.+||||..||-+
T Consensus 38 ~~ddDLQARLds 49 (54)
T 2v6x_B 38 NPDDDLQARLNT 49 (54)
T ss_dssp -CCHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 389999999875
Done!