Query psy13786
Match_columns 219
No_of_seqs 250 out of 1634
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 20:27:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13786.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13786hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02332 HpaX 4-hydroxyphenyl 99.9 5.4E-22 1.2E-26 161.5 16.0 169 46-217 6-187 (412)
2 TIGR01299 synapt_SV2 synaptic 99.9 2.7E-22 5.9E-27 171.6 14.3 170 43-215 162-351 (742)
3 COG2814 AraJ Arabinose efflux 99.9 3E-21 6.6E-26 152.5 16.8 169 47-218 12-187 (394)
4 PRK14995 methyl viologen resis 99.9 2.6E-21 5.6E-26 161.0 16.3 169 46-217 4-180 (495)
5 PRK11663 regulatory protein Uh 99.9 4.7E-21 1E-25 157.0 17.2 164 49-215 24-194 (434)
6 PRK03545 putative arabinose tr 99.9 4.1E-21 8.8E-26 155.3 16.4 148 66-216 27-181 (390)
7 KOG1330|consensus 99.9 1.6E-22 3.6E-27 160.0 5.8 170 46-218 31-208 (493)
8 PRK10213 nepI ribonucleoside t 99.9 2.4E-20 5.2E-25 151.0 18.5 143 69-214 41-190 (394)
9 TIGR00879 SP MFS transporter, 99.9 2.1E-20 4.4E-25 154.0 16.8 171 42-215 22-213 (481)
10 PRK11551 putative 3-hydroxyphe 99.9 3.8E-20 8.2E-25 150.3 17.7 170 43-215 10-186 (406)
11 TIGR00891 2A0112 putative sial 99.9 2.5E-20 5.5E-25 150.8 16.5 166 44-212 8-182 (405)
12 PRK10077 xylE D-xylose transpo 99.9 6.3E-20 1.4E-24 152.0 18.0 169 44-215 8-211 (479)
13 PRK15403 multidrug efflux syst 99.9 9.8E-20 2.1E-24 148.3 18.5 160 54-216 22-188 (413)
14 PRK10406 alpha-ketoglutarate t 99.8 6.7E-20 1.4E-24 150.2 17.4 166 44-212 18-212 (432)
15 PRK09556 uhpT sugar phosphate 99.8 1.3E-20 2.8E-25 155.8 12.3 168 46-216 27-209 (467)
16 COG2271 UhpC Sugar phosphate p 99.8 1.5E-20 3.3E-25 147.5 11.6 173 43-218 24-205 (448)
17 PRK12307 putative sialic acid 99.8 1E-19 2.2E-24 148.7 16.7 158 47-207 17-181 (426)
18 TIGR00903 2A0129 major facilit 99.8 7.7E-20 1.7E-24 146.6 14.8 149 65-217 8-163 (368)
19 TIGR00887 2A0109 phosphate:H+ 99.8 2.4E-19 5.2E-24 149.5 16.8 172 42-216 10-222 (502)
20 PRK10642 proline/glycine betai 99.8 2.9E-19 6.2E-24 148.6 17.1 160 49-211 17-205 (490)
21 TIGR00711 efflux_EmrB drug res 99.8 4.4E-20 9.4E-25 153.1 12.2 163 51-216 5-174 (485)
22 TIGR00710 efflux_Bcr_CflA drug 99.8 3.2E-19 6.9E-24 143.6 16.8 153 61-216 18-177 (385)
23 PLN00028 nitrate transmembrane 99.8 8E-19 1.7E-23 145.4 19.6 149 65-217 53-217 (476)
24 PRK03699 putative transporter; 99.8 3.3E-19 7.2E-24 144.4 16.9 161 52-215 11-179 (394)
25 PRK10091 MFS transport protein 99.8 2.5E-19 5.5E-24 144.5 15.6 152 61-215 16-174 (382)
26 PRK15402 multidrug efflux syst 99.8 7.6E-19 1.7E-23 142.8 17.7 170 44-216 9-185 (406)
27 PRK10504 putative transporter; 99.8 5.1E-19 1.1E-23 146.4 16.7 158 55-215 17-181 (471)
28 KOG0254|consensus 99.8 1E-18 2.2E-23 146.1 18.5 168 45-215 42-226 (513)
29 PRK09705 cynX putative cyanate 99.8 1.2E-18 2.5E-23 141.2 17.5 143 65-211 26-176 (393)
30 PF07690 MFS_1: Major Facilita 99.8 3.4E-19 7.4E-24 141.5 13.6 150 62-214 10-167 (352)
31 PRK03893 putative sialic acid 99.8 1.3E-18 2.8E-23 144.9 17.4 160 47-209 19-185 (496)
32 TIGR00893 2A0114 d-galactonate 99.8 3E-19 6.5E-24 143.5 13.2 151 63-216 9-166 (399)
33 TIGR00895 2A0115 benzoate tran 99.8 3E-19 6.6E-24 144.0 13.2 164 49-215 18-188 (398)
34 TIGR00898 2A0119 cation transp 99.8 6.9E-19 1.5E-23 146.8 15.1 138 76-216 120-261 (505)
35 TIGR00900 2A0121 H+ Antiporter 99.8 7.8E-19 1.7E-23 140.0 14.8 146 67-215 18-175 (365)
36 PRK11652 emrD multidrug resist 99.8 2.2E-18 4.7E-23 139.5 17.2 150 62-214 22-178 (394)
37 TIGR00890 2A0111 Oxalate/Forma 99.8 4.8E-19 1E-23 141.7 13.1 147 67-217 22-175 (377)
38 PRK09952 shikimate transporter 99.8 2.5E-18 5.4E-23 141.1 17.2 160 48-211 22-212 (438)
39 PRK05122 major facilitator sup 99.8 2.2E-18 4.8E-23 139.7 16.1 146 64-212 31-192 (399)
40 PRK11273 glpT sn-glycerol-3-ph 99.8 2.8E-18 6E-23 141.4 16.1 145 69-216 50-205 (452)
41 TIGR00712 glpT glycerol-3-phos 99.8 4.3E-18 9.3E-23 139.7 16.7 164 51-217 30-204 (438)
42 TIGR00894 2A0114euk Na(+)-depe 99.8 2.6E-18 5.7E-23 142.0 15.5 138 76-216 72-216 (465)
43 cd06174 MFS The Major Facilita 99.8 6.4E-18 1.4E-22 133.8 17.0 157 57-216 8-171 (352)
44 TIGR00892 2A0113 monocarboxyla 99.8 4.8E-18 1E-22 140.0 16.7 145 67-215 38-190 (455)
45 PRK15034 nitrate/nitrite trans 99.8 1.3E-17 2.7E-22 136.0 18.8 138 76-217 66-230 (462)
46 PRK10473 multidrug efflux syst 99.8 5.8E-18 1.3E-22 137.0 16.5 146 68-216 23-175 (392)
47 PRK11102 bicyclomycin/multidru 99.8 5.7E-18 1.2E-22 136.1 15.2 147 67-216 10-163 (377)
48 PRK11646 multidrug resistance 99.8 1.2E-17 2.6E-22 135.6 17.0 136 76-214 42-180 (400)
49 TIGR00881 2A0104 phosphoglycer 99.8 8.7E-19 1.9E-23 140.3 10.1 151 62-215 9-167 (379)
50 PRK15075 citrate-proton sympor 99.8 9.9E-18 2.1E-22 137.4 16.1 156 49-207 16-200 (434)
51 PRK10054 putative transporter; 99.8 1.2E-17 2.6E-22 135.3 16.4 137 76-215 39-178 (395)
52 PRK12382 putative transporter; 99.8 2.1E-17 4.4E-22 133.8 17.4 143 64-209 31-189 (392)
53 PRK10133 L-fucose transporter; 99.8 2.2E-17 4.9E-22 135.4 17.7 136 55-193 33-174 (438)
54 PRK11043 putative transporter; 99.8 1.8E-17 3.8E-22 134.5 16.9 151 63-216 21-178 (401)
55 TIGR00885 fucP L-fucose:H+ sym 99.8 1.4E-17 2.9E-22 135.6 16.2 161 52-215 7-203 (410)
56 PRK09874 drug efflux system pr 99.8 2.7E-17 5.8E-22 133.5 17.8 154 59-216 25-190 (408)
57 KOG0255|consensus 99.8 7E-18 1.5E-22 141.4 13.2 135 76-214 114-250 (521)
58 TIGR00806 rfc RFC reduced fola 99.8 4.5E-17 9.8E-22 131.4 16.9 123 76-202 57-183 (511)
59 TIGR00886 2A0108 nitrite extru 99.8 2.6E-17 5.6E-22 131.7 15.5 144 64-211 17-180 (366)
60 PF06609 TRI12: Fungal trichot 99.8 2.1E-17 4.6E-22 137.6 14.4 152 62-217 58-215 (599)
61 TIGR00924 yjdL_sub1_fam amino 99.7 7.7E-17 1.7E-21 133.5 16.6 137 76-212 44-185 (475)
62 PRK10207 dipeptide/tripeptide 99.7 4.4E-17 9.5E-22 135.2 15.0 131 76-207 46-182 (489)
63 PRK03633 putative MFS family t 99.7 6.4E-17 1.4E-21 130.5 15.6 138 55-195 13-153 (381)
64 KOG2533|consensus 99.7 3.5E-17 7.5E-22 134.5 14.1 140 76-218 77-226 (495)
65 KOG0252|consensus 99.7 1.4E-17 3E-22 132.1 9.3 171 40-213 33-240 (538)
66 PRK11195 lysophospholipid tran 99.7 1.2E-16 2.6E-21 129.5 15.0 125 76-206 34-161 (393)
67 TIGR00805 oat sodium-independe 99.7 4.2E-17 9E-22 139.0 12.1 159 55-216 40-278 (633)
68 TIGR00899 2A0120 sugar efflux 99.7 1.9E-16 4.1E-21 127.1 15.2 157 58-217 7-174 (375)
69 PTZ00207 hypothetical protein; 99.7 6.6E-16 1.4E-20 129.3 17.5 138 76-218 58-204 (591)
70 KOG3764|consensus 99.7 3.5E-17 7.6E-22 127.7 8.9 141 76-218 102-246 (464)
71 KOG0569|consensus 99.7 1E-15 2.2E-20 124.7 16.8 173 43-218 6-204 (485)
72 KOG2532|consensus 99.7 2.9E-16 6.3E-21 128.6 13.2 139 76-217 69-214 (466)
73 TIGR00896 CynX cyanate transpo 99.7 9.7E-16 2.1E-20 122.4 15.9 142 65-211 17-167 (355)
74 PRK10489 enterobactin exporter 99.7 1.4E-16 3.1E-21 129.9 11.3 137 76-215 48-193 (417)
75 TIGR00897 2A0118 polyol permea 99.7 1.1E-15 2.3E-20 124.3 16.0 125 76-203 44-177 (402)
76 TIGR00880 2_A_01_02 Multidrug 99.7 2.5E-16 5.4E-21 108.7 10.4 128 87-217 5-136 (141)
77 PRK09584 tppB putative tripept 99.7 3.2E-15 6.8E-20 124.6 17.0 136 76-212 53-194 (500)
78 PRK15462 dipeptide/tripeptide 99.7 3.1E-15 6.7E-20 123.2 16.5 138 76-214 41-184 (493)
79 COG2223 NarK Nitrate/nitrite t 99.7 1.4E-15 2.9E-20 119.9 13.4 170 44-218 13-192 (417)
80 KOG2615|consensus 99.7 7.2E-16 1.6E-20 119.8 10.0 115 77-195 65-179 (451)
81 PRK15011 sugar efflux transpor 99.6 1.9E-14 4.1E-19 116.7 17.7 138 76-217 248-389 (393)
82 TIGR00890 2A0111 Oxalate/Forma 99.6 4.1E-15 8.9E-20 119.0 13.6 134 76-212 236-375 (377)
83 TIGR01299 synapt_SV2 synaptic 99.6 8.8E-15 1.9E-19 125.9 15.3 133 82-217 597-732 (742)
84 TIGR00883 2A0106 metabolite-pr 99.6 5.9E-15 1.3E-19 118.8 13.5 134 77-213 27-185 (394)
85 PRK12382 putative transporter; 99.6 4.3E-14 9.3E-19 114.4 17.0 134 81-217 250-387 (392)
86 TIGR00893 2A0114 d-galactonate 99.6 1.7E-14 3.7E-19 115.9 14.6 139 76-218 247-398 (399)
87 TIGR00899 2A0120 sugar efflux 99.6 7.3E-14 1.6E-18 112.1 17.4 137 76-216 231-371 (375)
88 cd06174 MFS The Major Facilita 99.6 3.3E-14 7.1E-19 112.6 14.9 139 76-217 207-350 (352)
89 PRK11551 putative 3-hydroxyphe 99.6 2.4E-14 5.2E-19 116.3 14.4 137 76-215 251-392 (406)
90 PRK11010 ampG muropeptide tran 99.6 5.2E-14 1.1E-18 117.2 15.7 153 58-215 22-191 (491)
91 TIGR00889 2A0110 nucleoside tr 99.6 2.4E-14 5.3E-19 116.9 13.5 137 79-218 250-401 (418)
92 PRK06814 acylglycerophosphoeth 99.6 2.6E-14 5.6E-19 129.9 14.9 131 80-213 52-189 (1140)
93 PRK15011 sugar efflux transpor 99.6 1.6E-13 3.4E-18 111.3 17.7 137 76-216 47-191 (393)
94 PF00083 Sugar_tr: Sugar (and 99.6 5.4E-18 1.2E-22 139.5 -8.5 132 80-214 46-187 (451)
95 PRK09528 lacY galactoside perm 99.6 1.6E-14 3.4E-19 118.1 11.6 138 76-216 258-400 (420)
96 PRK11902 ampG muropeptide tran 99.6 8.2E-14 1.8E-18 113.3 15.4 154 55-213 6-176 (402)
97 PRK08633 2-acyl-glycerophospho 99.6 6.5E-14 1.4E-18 127.4 15.8 114 79-195 46-162 (1146)
98 TIGR00901 2A0125 AmpG-related 99.6 1E-13 2.2E-18 110.9 14.9 143 69-216 9-175 (356)
99 PRK05122 major facilitator sup 99.6 2.3E-13 5E-18 110.4 17.1 135 80-217 249-387 (399)
100 PRK10642 proline/glycine betai 99.6 2.6E-13 5.6E-18 113.1 16.9 137 76-216 282-427 (490)
101 COG0738 FucP Fucose permease [ 99.6 2.1E-13 4.6E-18 107.2 15.2 156 57-215 22-206 (422)
102 PRK09952 shikimate transporter 99.6 1.8E-13 4E-18 112.4 15.1 138 76-216 282-430 (438)
103 KOG2504|consensus 99.5 6.8E-14 1.5E-18 116.0 12.0 135 76-214 77-216 (509)
104 TIGR00882 2A0105 oligosacchari 99.5 1.6E-13 3.5E-18 111.3 13.9 136 76-216 34-180 (396)
105 TIGR00902 2A0127 phenyl propri 99.5 4.6E-13 9.9E-18 108.2 16.3 135 76-215 236-375 (382)
106 TIGR00891 2A0112 putative sial 99.5 1.3E-13 2.7E-18 111.7 12.9 125 76-203 270-400 (405)
107 PRK03699 putative transporter; 99.5 6.9E-13 1.5E-17 107.6 16.8 135 76-214 237-375 (394)
108 PRK09874 drug efflux system pr 99.5 1.1E-13 2.5E-18 112.3 11.8 133 82-217 260-396 (408)
109 KOG0253|consensus 99.5 2.4E-13 5.3E-18 105.7 11.8 167 43-214 73-246 (528)
110 PRK09556 uhpT sugar phosphate 99.5 9E-13 1.9E-17 109.2 16.1 138 76-216 290-446 (467)
111 TIGR00883 2A0106 metabolite-pr 99.5 1.4E-13 3.1E-18 110.7 11.1 131 76-209 251-391 (394)
112 TIGR00902 2A0127 phenyl propri 99.5 4.6E-13 1E-17 108.2 13.5 144 59-207 15-167 (382)
113 PRK11128 putative 3-phenylprop 99.5 5E-13 1.1E-17 108.0 13.6 141 64-211 20-171 (382)
114 PRK03545 putative arabinose tr 99.5 2.5E-12 5.5E-17 104.1 17.5 137 76-217 237-378 (390)
115 PRK03633 putative MFS family t 99.5 1.7E-12 3.6E-17 104.9 16.0 135 76-216 231-369 (381)
116 TIGR00897 2A0118 polyol permea 99.5 1.4E-12 3E-17 106.1 15.6 138 76-218 253-400 (402)
117 TIGR01301 GPH_sucrose GPH fami 99.5 1.5E-12 3.3E-17 107.0 15.2 138 76-216 35-215 (477)
118 TIGR00895 2A0115 benzoate tran 99.5 3.5E-13 7.7E-18 108.7 11.0 116 76-194 281-396 (398)
119 PRK10489 enterobactin exporter 99.5 2.6E-12 5.7E-17 104.9 16.2 137 76-215 255-395 (417)
120 TIGR00879 SP MFS transporter, 99.5 1.7E-12 3.7E-17 107.0 15.2 139 76-217 315-468 (481)
121 PRK09528 lacY galactoside perm 99.5 1.8E-12 3.9E-17 106.0 14.6 136 76-216 42-188 (420)
122 TIGR00882 2A0105 oligosacchari 99.5 2E-12 4.3E-17 104.9 14.2 139 76-217 250-393 (396)
123 KOG2325|consensus 99.4 9.2E-12 2E-16 101.3 17.0 172 39-217 28-227 (488)
124 PRK11663 regulatory protein Uh 99.4 4.4E-12 9.6E-17 104.2 15.4 139 76-217 275-422 (434)
125 TIGR00898 2A0119 cation transp 99.4 2.3E-12 4.9E-17 107.7 13.9 130 85-217 360-493 (505)
126 COG3104 PTR2 Dipeptide/tripept 99.4 1.2E-12 2.6E-17 105.7 11.6 140 76-216 57-203 (498)
127 PRK03893 putative sialic acid 99.4 3.1E-12 6.7E-17 106.7 14.5 129 76-207 307-441 (496)
128 TIGR00892 2A0113 monocarboxyla 99.4 3.5E-12 7.5E-17 105.4 13.8 136 76-214 272-416 (455)
129 PRK09705 cynX putative cyanate 99.4 1.8E-11 3.9E-16 99.3 17.6 135 76-215 236-377 (393)
130 KOG0569|consensus 99.4 1.5E-11 3.2E-16 100.6 16.5 171 42-218 266-453 (485)
131 PRK11128 putative 3-phenylprop 99.4 1.5E-11 3.3E-16 99.3 16.6 134 76-214 236-374 (382)
132 PRK11273 glpT sn-glycerol-3-ph 99.4 7.1E-12 1.5E-16 103.5 14.9 138 76-216 285-432 (452)
133 PF11700 ATG22: Vacuole efflux 99.4 1.5E-11 3.2E-16 101.6 16.5 139 76-217 313-466 (477)
134 PRK15075 citrate-proton sympor 99.4 6.2E-12 1.3E-16 103.3 14.3 117 76-195 270-391 (434)
135 TIGR00900 2A0121 H+ Antiporter 99.4 2.7E-12 5.8E-17 102.4 11.8 117 76-195 243-360 (365)
136 TIGR00887 2A0109 phosphate:H+ 99.4 9.5E-12 2.1E-16 104.0 15.1 125 87-214 342-484 (502)
137 PRK10406 alpha-ketoglutarate t 99.4 1.8E-11 3.9E-16 100.5 16.0 138 76-216 275-421 (432)
138 TIGR00881 2A0104 phosphoglycer 99.4 4.1E-12 8.9E-17 101.7 11.3 122 76-200 248-378 (379)
139 COG2271 UhpC Sugar phosphate p 99.4 1E-11 2.2E-16 98.4 13.0 164 50-216 254-431 (448)
140 COG2814 AraJ Arabinose efflux 99.4 5.5E-11 1.2E-15 94.7 16.3 144 68-216 235-383 (394)
141 PRK10077 xylE D-xylose transpo 99.4 3.5E-11 7.6E-16 99.9 15.9 139 76-217 302-455 (479)
142 TIGR02718 sider_RhtX_FptX side 99.4 3.1E-11 6.7E-16 97.8 14.4 136 76-214 239-386 (390)
143 PF05977 MFS_3: Transmembrane 99.4 2.7E-11 5.8E-16 101.1 14.3 134 76-212 41-183 (524)
144 PRK08633 2-acyl-glycerophospho 99.3 4.8E-11 1E-15 108.8 16.8 131 76-209 264-400 (1146)
145 PF05977 MFS_3: Transmembrane 99.3 7.5E-11 1.6E-15 98.5 16.4 137 76-215 250-390 (524)
146 COG2807 CynX Cyanate permease 99.3 1E-10 2.2E-15 91.1 15.7 165 47-216 11-183 (395)
147 PRK11010 ampG muropeptide tran 99.3 8.2E-11 1.8E-15 98.1 16.5 139 76-217 254-401 (491)
148 TIGR00792 gph sugar (Glycoside 99.3 1.4E-11 3E-16 101.1 11.6 138 76-216 31-191 (437)
149 PRK12307 putative sialic acid 99.3 9.1E-11 2E-15 96.0 15.7 117 76-195 262-380 (426)
150 TIGR00792 gph sugar (Glycoside 99.3 7.6E-11 1.6E-15 96.7 15.2 118 78-195 255-377 (437)
151 TIGR01272 gluP glucose/galacto 99.3 9.5E-11 2.1E-15 92.1 15.1 123 76-204 174-300 (310)
152 TIGR00712 glpT glycerol-3-phos 99.3 3.1E-11 6.6E-16 99.3 12.3 139 76-217 283-431 (438)
153 PRK10504 putative transporter; 99.3 1E-10 2.2E-15 97.0 15.3 117 76-195 293-412 (471)
154 KOG0253|consensus 99.3 1.9E-11 4E-16 95.4 9.6 125 89-216 390-516 (528)
155 PRK10091 MFS transport protein 99.3 1.5E-10 3.3E-15 93.5 15.5 134 76-214 231-371 (382)
156 TIGR00711 efflux_EmrB drug res 99.3 5.4E-11 1.2E-15 98.8 11.7 117 76-195 287-407 (485)
157 TIGR02332 HpaX 4-hydroxyphenyl 99.3 5.7E-11 1.2E-15 97.0 11.3 130 76-208 275-410 (412)
158 TIGR00889 2A0110 nucleoside tr 99.3 1.2E-10 2.7E-15 95.2 13.2 128 76-213 34-174 (418)
159 TIGR00710 efflux_Bcr_CflA drug 99.3 2.3E-10 4.9E-15 92.1 14.1 113 76-192 238-356 (385)
160 PLN00028 nitrate transmembrane 99.3 1.2E-10 2.5E-15 96.9 12.6 138 76-217 284-431 (476)
161 PRK10054 putative transporter; 99.2 1.4E-10 3.1E-15 94.2 12.7 129 76-208 240-373 (395)
162 PRK15402 multidrug efflux syst 99.2 2.3E-10 5E-15 93.1 14.0 116 76-195 247-367 (406)
163 PRK10213 nepI ribonucleoside t 99.2 5.9E-10 1.3E-14 90.5 15.9 132 76-212 248-384 (394)
164 PRK11195 lysophospholipid tran 99.2 7.2E-10 1.6E-14 90.0 16.4 130 72-205 233-366 (393)
165 PRK06814 acylglycerophosphoeth 99.2 3.2E-10 6.9E-15 103.5 15.4 129 76-207 257-410 (1140)
166 PF05631 DUF791: Protein of un 99.2 1.3E-09 2.8E-14 85.3 16.5 140 76-216 65-213 (354)
167 TIGR02718 sider_RhtX_FptX side 99.2 6.3E-10 1.4E-14 90.1 15.4 163 51-216 4-181 (390)
168 PRK14995 methyl viologen resis 99.2 1.6E-10 3.4E-15 96.6 12.2 117 76-195 291-410 (495)
169 COG2223 NarK Nitrate/nitrite t 99.2 1E-10 2.2E-15 92.7 10.1 138 76-217 250-399 (417)
170 PF07690 MFS_1: Major Facilita 99.2 1.1E-10 2.4E-15 92.7 10.3 111 76-189 238-352 (352)
171 COG2270 Permeases of the major 99.2 2E-10 4.4E-15 91.2 11.5 136 76-214 284-424 (438)
172 PF01306 LacY_symp: LacY proto 99.2 9.3E-10 2E-14 88.5 15.2 140 76-218 255-399 (412)
173 TIGR00896 CynX cyanate transpo 99.2 3.1E-10 6.7E-15 90.7 12.6 116 76-195 228-345 (355)
174 TIGR00894 2A0114euk Na(+)-depe 99.2 3.3E-10 7.1E-15 93.9 12.7 144 68-215 281-446 (465)
175 PF13347 MFS_2: MFS/sugar tran 99.2 1.6E-09 3.5E-14 88.9 16.5 119 76-195 257-381 (428)
176 KOG2504|consensus 99.2 4.2E-10 9.1E-15 93.7 11.7 148 66-216 316-473 (509)
177 PRK15034 nitrate/nitrite trans 99.2 1.1E-09 2.4E-14 89.8 13.9 143 76-218 282-453 (462)
178 TIGR00901 2A0125 AmpG-related 99.2 4.3E-10 9.3E-15 89.9 11.4 104 76-182 240-355 (356)
179 TIGR00903 2A0129 major facilit 99.2 1.1E-09 2.4E-14 88.1 13.8 142 68-216 212-362 (368)
180 PRK11902 ampG muropeptide tran 99.2 2.6E-09 5.7E-14 86.9 16.1 134 76-216 241-387 (402)
181 KOG2563|consensus 99.2 1.9E-09 4.1E-14 86.3 14.6 152 40-195 37-199 (480)
182 PF03825 Nuc_H_symport: Nucleo 99.2 2.6E-09 5.6E-14 86.7 15.4 137 77-216 240-392 (400)
183 PRK10133 L-fucose transporter; 99.1 1.8E-09 3.9E-14 88.9 14.2 130 76-211 291-425 (438)
184 TIGR00788 fbt folate/biopterin 99.1 1.2E-09 2.6E-14 90.6 12.8 133 76-213 57-203 (468)
185 PRK09848 glucuronide transport 99.1 6E-09 1.3E-13 86.0 16.8 120 76-195 260-385 (448)
186 PRK11646 multidrug resistance 99.1 3.3E-09 7.1E-14 86.3 14.5 135 76-213 239-382 (400)
187 PRK11102 bicyclomycin/multidru 99.1 4.7E-09 1E-13 84.5 14.8 116 76-195 226-346 (377)
188 PRK10473 multidrug efflux syst 99.1 6.7E-09 1.5E-13 84.2 15.4 125 76-205 235-360 (392)
189 PRK09669 putative symporter Ya 99.1 4E-09 8.6E-14 87.0 13.1 136 76-214 41-199 (444)
190 PF06813 Nodulin-like: Nodulin 99.0 1.6E-08 3.4E-13 76.5 14.8 126 65-195 19-154 (250)
191 PRK10429 melibiose:sodium symp 99.0 1.9E-08 4.2E-13 83.6 16.1 118 78-195 264-390 (473)
192 KOG4686|consensus 99.0 7.9E-09 1.7E-13 78.4 11.3 115 76-195 296-411 (459)
193 PF03209 PUCC: PUCC protein; 99.0 2.2E-07 4.8E-12 74.1 19.0 146 67-215 231-394 (403)
194 TIGR00924 yjdL_sub1_fam amino 99.0 5.6E-08 1.2E-12 80.9 16.2 132 82-216 314-465 (475)
195 COG0477 ProP Permeases of the 98.9 5.9E-08 1.3E-12 74.8 14.7 126 80-208 39-174 (338)
196 PRK09584 tppB putative tripept 98.9 9E-08 2E-12 80.2 16.5 129 82-213 318-473 (500)
197 TIGR00886 2A0108 nitrite extru 98.9 3.9E-09 8.4E-14 84.5 7.9 105 76-184 257-365 (366)
198 KOG2532|consensus 98.9 5.9E-09 1.3E-13 85.9 9.0 164 50-216 260-444 (466)
199 PRK11043 putative transporter; 98.9 8.6E-08 1.9E-12 77.9 15.2 116 76-195 234-354 (401)
200 COG2807 CynX Cyanate permease 98.9 1.7E-07 3.6E-12 73.5 15.7 163 46-216 210-382 (395)
201 PRK09669 putative symporter Ya 98.9 2.2E-07 4.7E-12 76.7 17.5 115 81-195 265-385 (444)
202 PRK10429 melibiose:sodium symp 98.9 6.5E-08 1.4E-12 80.5 13.9 134 76-212 38-194 (473)
203 PF13347 MFS_2: MFS/sugar tran 98.9 1E-08 2.3E-13 84.1 8.5 139 76-216 33-195 (428)
204 KOG3764|consensus 98.8 1E-08 2.2E-13 81.0 7.4 152 64-215 286-450 (464)
205 COG2211 MelB Na+/melibiose sym 98.8 4.8E-07 1E-11 74.0 16.8 120 76-195 268-393 (467)
206 PRK11652 emrD multidrug resist 98.8 3E-07 6.6E-12 74.6 15.8 116 76-195 239-357 (394)
207 PRK11462 putative transporter; 98.8 2.6E-07 5.5E-12 76.7 14.8 135 76-212 41-197 (460)
208 TIGR00788 fbt folate/biopterin 98.8 7.7E-08 1.7E-12 79.9 11.6 117 76-195 284-410 (468)
209 TIGR00885 fucP L-fucose:H+ sym 98.8 1.8E-07 3.9E-12 76.4 13.6 112 78-195 267-378 (410)
210 KOG3762|consensus 98.8 2.4E-08 5.1E-13 81.7 8.1 138 76-216 402-544 (618)
211 KOG0252|consensus 98.8 9.3E-09 2E-13 82.6 5.6 120 95-217 363-496 (538)
212 TIGR00926 2A1704 Peptide:H+ sy 98.8 4.2E-07 9E-12 78.1 15.8 141 76-216 19-179 (654)
213 PF01306 LacY_symp: LacY proto 98.8 9.1E-08 2E-12 77.2 11.0 143 67-214 30-183 (412)
214 PRK10207 dipeptide/tripeptide 98.8 5.3E-07 1.2E-11 75.3 15.9 131 82-215 311-472 (489)
215 PF03825 Nuc_H_symport: Nucleo 98.7 2.1E-07 4.5E-12 75.7 12.3 101 64-164 18-122 (400)
216 PF00083 Sugar_tr: Sugar (and 98.7 9.6E-11 2.1E-15 96.6 -9.0 127 87-216 293-433 (451)
217 COG2211 MelB Na+/melibiose sym 98.7 9.6E-07 2.1E-11 72.2 14.1 139 76-216 44-204 (467)
218 PRK11462 putative transporter; 98.7 4E-06 8.6E-11 69.7 17.7 116 80-195 263-384 (460)
219 KOG0254|consensus 98.7 2.1E-06 4.6E-11 72.2 16.1 165 43-213 292-476 (513)
220 KOG2816|consensus 98.6 1.6E-06 3.5E-11 71.5 14.4 122 88-217 70-197 (463)
221 TIGR01301 GPH_sucrose GPH fami 98.6 1.9E-06 4.2E-11 71.4 14.3 134 84-218 309-470 (477)
222 PRK09848 glucuronide transport 98.6 3E-06 6.4E-11 70.1 14.2 117 76-194 40-173 (448)
223 PF05978 UNC-93: Ion channel r 98.5 3.5E-06 7.6E-11 59.2 11.6 112 78-193 35-146 (156)
224 KOG0637|consensus 98.5 2E-07 4.4E-12 75.0 5.2 137 57-197 45-204 (498)
225 PF06609 TRI12: Fungal trichot 98.4 4.6E-06 9.9E-11 70.6 12.6 132 58-192 320-461 (599)
226 PF03137 OATP: Organic Anion T 98.4 3.9E-08 8.4E-13 82.7 -0.2 135 58-195 13-200 (539)
227 COG0738 FucP Fucose permease [ 98.4 9.1E-06 2E-10 64.8 12.8 114 76-195 268-381 (422)
228 PF06779 DUF1228: Protein of u 98.4 8.6E-07 1.9E-11 55.2 5.4 76 61-136 5-83 (85)
229 KOG4686|consensus 98.4 7.6E-08 1.7E-12 73.2 0.8 148 45-195 41-195 (459)
230 KOG3626|consensus 98.4 2.4E-06 5.3E-11 73.1 9.6 168 48-218 97-342 (735)
231 KOG2615|consensus 98.3 4E-06 8.6E-11 66.4 9.1 117 76-195 293-411 (451)
232 PRK15403 multidrug efflux syst 98.3 6.7E-05 1.5E-09 61.5 16.6 129 76-208 250-386 (413)
233 PF12832 MFS_1_like: MFS_1 lik 98.3 2.3E-06 5.1E-11 52.6 5.8 55 65-119 17-74 (77)
234 KOG2533|consensus 98.2 4E-06 8.7E-11 69.7 7.7 153 51-205 276-442 (495)
235 TIGR01272 gluP glucose/galacto 98.2 1.3E-05 2.8E-10 63.1 9.7 84 128-214 5-108 (310)
236 PF01770 Folate_carrier: Reduc 98.2 0.00029 6.4E-09 57.0 17.2 138 76-217 36-180 (412)
237 KOG2816|consensus 98.2 7.9E-05 1.7E-09 61.7 13.9 116 76-195 273-389 (463)
238 PRK15462 dipeptide/tripeptide 98.2 0.00016 3.6E-09 60.3 15.7 111 82-195 310-437 (493)
239 PF03092 BT1: BT1 family; Int 98.2 2.5E-05 5.3E-10 64.4 10.8 138 76-215 21-171 (433)
240 PF00854 PTR2: POT family; In 98.1 3.3E-05 7.2E-10 62.4 10.4 106 111-216 2-120 (372)
241 PF11700 ATG22: Vacuole efflux 98.1 0.0004 8.7E-09 58.0 15.7 132 81-215 71-243 (477)
242 PF02487 CLN3: CLN3 protein; 98.0 0.00017 3.7E-09 58.3 12.1 113 78-195 279-394 (402)
243 PF03209 PUCC: PUCC protein; 98.0 0.00062 1.3E-08 54.8 15.0 116 76-195 11-148 (403)
244 PTZ00207 hypothetical protein; 98.0 0.00037 8E-09 59.4 14.6 127 85-216 396-549 (591)
245 KOG0255|consensus 98.0 0.00031 6.7E-09 59.3 13.5 101 92-195 362-465 (521)
246 TIGR00769 AAA ADP/ATP carrier 97.8 0.0028 6.2E-08 52.7 16.2 115 78-195 41-188 (472)
247 PF06963 FPN1: Ferroportin1 (F 97.7 0.0021 4.6E-08 52.8 13.3 117 76-195 289-415 (432)
248 KOG1237|consensus 97.5 0.0057 1.2E-07 52.2 14.2 141 76-216 69-242 (571)
249 PRK03612 spermidine synthase; 97.5 0.018 3.9E-07 48.8 16.8 115 76-195 46-168 (521)
250 COG3104 PTR2 Dipeptide/tripept 97.4 0.012 2.7E-07 48.6 14.3 129 81-212 325-480 (498)
251 COG2270 Permeases of the major 97.4 0.003 6.5E-08 51.1 10.3 93 81-176 59-155 (438)
252 KOG4332|consensus 97.3 0.00095 2.1E-08 51.0 6.5 86 76-162 68-154 (454)
253 KOG1330|consensus 97.2 0.0034 7.3E-08 51.4 8.6 117 76-195 279-409 (493)
254 KOG3098|consensus 97.1 0.0054 1.2E-07 50.7 9.4 107 85-195 55-161 (461)
255 TIGR00939 2a57 Equilibrative N 97.1 0.031 6.8E-07 46.3 13.7 108 82-193 309-429 (437)
256 KOG3574|consensus 97.0 0.028 6.2E-07 45.2 12.4 133 55-193 38-190 (510)
257 KOG3098|consensus 96.8 0.15 3.3E-06 42.3 15.4 107 83-193 282-409 (461)
258 PF03092 BT1: BT1 family; Int 96.6 0.021 4.5E-07 47.3 9.3 117 76-195 251-377 (433)
259 KOG3762|consensus 96.5 0.0037 7.9E-08 52.2 4.4 69 61-129 24-96 (618)
260 KOG2563|consensus 96.5 0.0067 1.5E-07 49.6 5.5 117 76-195 297-418 (480)
261 KOG1479|consensus 96.0 0.25 5.4E-06 40.2 12.2 108 81-192 283-399 (406)
262 KOG2325|consensus 96.0 0.02 4.3E-07 47.7 6.0 67 141-210 396-466 (488)
263 PF02487 CLN3: CLN3 protein; 95.8 0.23 4.9E-06 40.6 11.1 124 85-216 64-192 (402)
264 COG3202 ATP/ADP translocase [E 95.4 1.4 3E-05 36.9 16.0 117 76-195 57-207 (509)
265 PF01770 Folate_carrier: Reduc 94.8 0.7 1.5E-05 37.9 11.1 98 80-180 285-384 (412)
266 PF03137 OATP: Organic Anion T 94.8 0.008 1.7E-07 51.1 0.0 139 54-195 311-511 (539)
267 PF01733 Nucleoside_tran: Nucl 94.3 0.014 3E-07 46.0 0.3 106 85-193 187-305 (309)
268 TIGR00805 oat sodium-independe 94.2 0.071 1.5E-06 46.4 4.5 59 68-126 350-415 (633)
269 PF03219 TLC: TLC ATP/ADP tran 94.1 3.3 7.1E-05 35.1 16.7 117 76-195 54-203 (491)
270 PF13000 Acatn: Acetyl-coenzym 93.0 2.5 5.4E-05 35.7 11.1 135 54-195 6-177 (544)
271 KOG3880|consensus 92.7 0.23 4.9E-06 39.1 4.5 111 80-195 288-401 (409)
272 KOG4332|consensus 89.3 9 0.0002 30.0 11.8 153 58-213 259-425 (454)
273 KOG0637|consensus 88.9 0.67 1.5E-05 38.4 4.2 129 84-212 336-489 (498)
274 PF07672 MFS_Mycoplasma: Mycop 88.8 9.2 0.0002 29.5 10.0 100 85-188 146-255 (267)
275 KOG3810|consensus 88.1 1.7 3.8E-05 34.9 5.8 100 92-195 54-153 (433)
276 TIGR00806 rfc RFC reduced fola 87.9 2.4 5.3E-05 35.7 6.8 98 82-182 300-399 (511)
277 TIGR00880 2_A_01_02 Multidrug 86.5 3.8 8.3E-05 27.0 6.4 40 82-121 89-128 (141)
278 KOG3097|consensus 86.3 5.8 0.00013 31.8 7.7 72 90-162 68-139 (390)
279 COG1288 Predicted membrane pro 83.1 21 0.00046 29.7 9.7 73 114-190 358-438 (481)
280 PF06963 FPN1: Ferroportin1 (F 82.3 28 0.00061 29.1 15.8 128 83-214 41-195 (432)
281 COG4262 Predicted spermidine s 80.1 31 0.00067 28.2 11.5 85 76-160 39-132 (508)
282 TIGR00769 AAA ADP/ATP carrier 79.8 37 0.00079 28.8 15.2 70 139-210 272-345 (472)
283 COG5336 Uncharacterized protei 79.6 14 0.00031 24.1 6.2 29 87-115 49-78 (116)
284 KOG3810|consensus 76.1 9.5 0.00021 31.0 5.7 96 83-181 274-371 (433)
285 PF11947 DUF3464: Protein of u 74.2 21 0.00046 25.0 6.5 51 131-187 95-145 (153)
286 KOG3626|consensus 73.4 2.9 6.2E-05 37.0 2.5 75 52-126 396-477 (735)
287 KOG3880|consensus 72.2 6.8 0.00015 31.2 4.0 132 82-217 64-197 (409)
288 PF13000 Acatn: Acetyl-coenzym 71.4 66 0.0014 27.6 12.4 56 136-194 408-463 (544)
289 TIGR00926 2A1704 Peptide:H+ sy 65.0 66 0.0014 28.6 9.0 77 135-214 567-647 (654)
290 PF07857 DUF1632: CEO family ( 56.6 45 0.00097 25.7 5.8 19 45-63 180-198 (254)
291 KOG1237|consensus 53.2 1.6E+02 0.0034 25.8 11.6 60 133-195 458-517 (571)
292 PRK14229 camphor resistance pr 52.9 63 0.0014 21.2 9.0 49 116-164 32-80 (108)
293 COG1268 BioY Uncharacterized c 52.4 87 0.0019 22.8 6.4 24 86-109 88-111 (184)
294 TIGR00939 2a57 Equilibrative N 50.8 1.5E+02 0.0032 24.9 13.5 33 132-165 105-137 (437)
295 PRK10263 DNA translocase FtsK; 49.9 2.1E+02 0.0045 28.0 9.7 19 90-108 62-80 (1355)
296 PF03219 TLC: TLC ATP/ADP tran 48.2 1.8E+02 0.0038 25.0 15.5 70 139-210 288-361 (491)
297 PF06779 DUF1228: Protein of u 48.2 66 0.0014 20.1 7.2 47 143-195 4-50 (85)
298 PF11299 DUF3100: Protein of u 47.2 67 0.0014 24.4 5.2 47 141-191 179-225 (241)
299 PF02694 UPF0060: Uncharacteri 46.4 44 0.00094 21.9 3.7 48 79-126 53-100 (107)
300 PF02632 BioY: BioY family; I 46.3 1E+02 0.0022 21.5 6.3 26 86-111 59-84 (148)
301 COG4769 Predicted membrane pro 44.6 80 0.0017 22.5 5.0 47 93-145 86-132 (181)
302 PRK02237 hypothetical protein; 44.2 74 0.0016 20.9 4.5 48 80-127 56-103 (109)
303 PRK14230 camphor resistance pr 43.9 97 0.0021 20.7 8.3 49 116-164 36-84 (119)
304 PF04281 Tom22: Mitochondrial 42.9 1.1E+02 0.0024 21.1 5.6 29 157-188 59-87 (137)
305 COG2233 UraA Xanthine/uracil p 40.3 2.3E+02 0.005 24.0 8.7 90 76-165 45-137 (451)
306 PF10785 NADH-u_ox-rdase: NADH 40.0 93 0.002 19.4 5.4 39 95-133 33-78 (86)
307 PF05631 DUF791: Protein of un 39.0 2.1E+02 0.0047 23.3 12.8 102 91-192 174-298 (354)
308 KOG3097|consensus 38.2 1.5E+02 0.0032 24.2 6.1 47 76-122 306-352 (390)
309 KOG1479|consensus 38.1 2.4E+02 0.0052 23.6 13.9 32 133-165 117-148 (406)
310 TIGR00986 3a0801s05tom22 mitoc 37.1 1.4E+02 0.003 20.8 5.1 27 157-186 57-83 (145)
311 PRK11469 hypothetical protein; 32.4 2E+02 0.0043 21.0 7.6 51 76-126 130-181 (188)
312 PRK14211 camphor resistance pr 29.9 1.7E+02 0.0037 19.4 8.4 75 90-164 7-82 (114)
313 PF06912 DUF1275: Protein of u 29.8 2.3E+02 0.0049 20.8 15.5 24 174-197 168-191 (209)
314 TIGR02230 ATPase_gene1 F0F1-AT 29.7 1.6E+02 0.0035 19.1 6.4 23 95-117 57-80 (100)
315 PF13493 DUF4118: Domain of un 28.7 80 0.0017 20.1 3.0 25 86-110 81-105 (105)
316 PF04474 DUF554: Protein of un 28.3 1.7E+02 0.0036 22.2 4.9 52 89-140 11-62 (226)
317 TIGR03173 pbuX xanthine permea 27.6 3.5E+02 0.0076 22.3 8.4 93 76-172 24-117 (406)
318 KOG4112|consensus 27.6 1.7E+02 0.0037 18.7 5.7 39 176-214 27-66 (101)
319 PF13940 Ldr_toxin: Toxin Ldr, 27.3 93 0.002 15.5 2.5 20 87-106 15-34 (35)
320 COG1230 CzcD Co/Zn/Cd efflux s 27.0 3.2E+02 0.007 21.7 10.0 31 169-199 155-186 (296)
321 KOG2765|consensus 27.0 40 0.00086 27.5 1.5 32 83-116 189-220 (416)
322 KOG3574|consensus 26.7 1.6E+02 0.0035 24.7 4.8 54 139-195 375-428 (510)
323 PF06645 SPC12: Microsomal sig 24.9 1.7E+02 0.0037 17.7 4.9 8 98-105 25-32 (76)
324 PRK10692 hypothetical protein; 24.1 1.8E+02 0.004 18.2 3.7 19 109-127 3-21 (92)
325 CHL00114 psbX photosystem II p 24.0 1.2E+02 0.0026 15.8 3.1 23 78-100 2-24 (39)
326 PF00854 PTR2: POT family; In 24.0 1.7E+02 0.0036 23.6 4.7 47 83-129 75-121 (372)
327 TIGR00801 ncs2 uracil-xanthine 23.8 4.3E+02 0.0093 22.0 8.6 93 77-172 34-130 (415)
328 PF03616 Glt_symporter: Sodium 23.3 4.2E+02 0.0091 21.7 10.2 21 91-111 251-271 (368)
329 PF11085 YqhR: Conserved membr 22.9 3E+02 0.0065 19.9 10.0 75 76-150 62-151 (173)
330 PF03596 Cad: Cadmium resistan 22.9 3E+02 0.0065 20.2 5.3 43 68-110 114-165 (191)
331 PF02990 EMP70: Endomembrane p 22.8 3.5E+02 0.0075 23.4 6.5 27 169-195 294-320 (521)
332 PF13829 DUF4191: Domain of un 22.8 3.4E+02 0.0074 20.5 5.7 17 196-212 50-66 (224)
333 PF05232 BTP: Bacterial Transm 21.8 1.2E+02 0.0027 17.8 2.6 35 76-110 30-64 (67)
334 PRK03612 spermidine synthase; 21.2 4.1E+02 0.0089 23.0 6.6 36 80-115 145-181 (521)
335 COG2119 Predicted membrane pro 20.9 3.2E+02 0.0069 20.0 4.9 36 89-124 143-178 (190)
336 PF04550 Phage_holin_2: Phage 20.9 2.1E+02 0.0046 18.0 3.5 32 134-165 32-63 (89)
337 PF15061 DUF4538: Domain of un 20.7 1.2E+02 0.0025 17.5 2.2 19 196-214 4-22 (58)
338 KOG2601|consensus 20.6 5.2E+02 0.011 21.8 8.4 37 82-118 65-101 (503)
339 TIGR02840 spore_YtaF putative 20.2 3.7E+02 0.008 19.9 7.9 47 76-123 153-202 (206)
No 1
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=5.4e-22 Score=161.53 Aligned_cols=169 Identities=13% Similarity=0.037 Sum_probs=147.4
Q ss_pred HHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH
Q psy13786 46 LIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC 122 (219)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~ 122 (219)
++.....+.+.++.+.++....+...|.+. |.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 344555566666677777777776666554 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-------
Q psy13786 123 GWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------- 195 (219)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------- 195 (219)
+.+++++++|++.+++.|++.|++.+...+....++.|++|++ +|++.+++++....+|..+++.+++.+
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY---FRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999898889999999999 999999999999999999998887643
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 196 ---WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 196 ---~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+||+.|++.++..++..++.++
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhh
Confidence 8999999988887766555543
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=2.7e-22 Score=171.64 Aligned_cols=170 Identities=19% Similarity=0.188 Sum_probs=149.1
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
.++++.+.+++.++.+..+++....+..+|.+. |++..+.+++.+++.++.+++++++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345667777777888888888887787888775 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----
Q psy13786 120 SLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---- 195 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---- 195 (219)
.+++.++++++++++.++++|++.|++.++..+....++.|++|++ +|++.+++.+++..+|..+++.++..+
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~---~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE---KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999 999999999999999999988765432
Q ss_pred -------------hhHHHHHHHHHHHHHHHHHH
Q psy13786 196 -------------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 196 -------------~w~~~~~~~~~~~~~~~~~~ 215 (219)
+||+.+++.++++++.++..
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 58999888877766655443
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3e-21 Score=152.53 Aligned_cols=169 Identities=22% Similarity=0.225 Sum_probs=154.3
Q ss_pred HHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH
Q psy13786 47 IYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG 123 (219)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~ 123 (219)
+...+.+.++.|..+.........+|++. |.|..+.|+..+.+.++..+++++...+.||+.||++++....++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 34445555666777777777788888887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHH
Q psy13786 124 WLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTT 199 (219)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 199 (219)
.+++++++|++.+.+.|++.|+..|.+++...+...+..|++ +|++++++...+..++..+|.+++.++ |||+
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~---~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPG---KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc---chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 999999999999999999999999999999999999999999 999999999999999999999888888 9999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy13786 200 VAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~ 218 (219)
.|+..+.++++..+..+..
T Consensus 169 ~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 169 TFLAIAVLALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999998888776653
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.88 E-value=2.6e-21 Score=161.00 Aligned_cols=169 Identities=17% Similarity=0.145 Sum_probs=150.2
Q ss_pred HHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH
Q psy13786 46 LIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC 122 (219)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~ 122 (219)
++.....+.+..+....+.+..+..+|.+. |.+.++.+|+.+.+.++..++.++.|+++||+|||+++.++.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 455677777888888888988888888887 88889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhcc-CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hh
Q psy13786 123 GWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECI-TIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WY 197 (219)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w 197 (219)
+.+.+++++|++.++++|+++|++.+...+.....+.+.+ |++ +|++++++......+|..++|.+++.+ +|
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~---~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEK---QRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999999999999999999999988887777777765 667 899999999999999999999999988 99
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy13786 198 TTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~ 217 (219)
||.|++...+.++..++.++
T Consensus 161 r~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999987776666555443
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.87 E-value=4.7e-21 Score=157.01 Aligned_cols=164 Identities=15% Similarity=0.074 Sum_probs=140.6
Q ss_pred HHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHH
Q psy13786 49 LGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWL 125 (219)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~ 125 (219)
......+..+...++...++...|.+. |.++.+.+++.+.+.++..+++++.|++.||+|||+++.++.++..++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence 333344444555555555556666665 89999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHH
Q psy13786 126 LMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVA 201 (219)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~ 201 (219)
+.+++++++.+.+.|++.|++.|...+....++.|++|++ +|++++++.+.+..+|..++|.+.+.+ +||+.|
T Consensus 104 ~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f 180 (434)
T PRK11663 104 LFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT---ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGM 180 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHH
Confidence 9999999999999999999999988899999999999999 999999999999999999999888876 999999
Q ss_pred HHHHHHHHHHHHHH
Q psy13786 202 YIGAFVSFLSLVLV 215 (219)
Q Consensus 202 ~~~~~~~~~~~~~~ 215 (219)
++.+++.++..+..
T Consensus 181 ~~~~i~~~~~~~~~ 194 (434)
T PRK11663 181 MIAGIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHHHHHHH
Confidence 98887766554433
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.87 E-value=4.1e-21 Score=155.31 Aligned_cols=148 Identities=15% Similarity=0.107 Sum_probs=133.3
Q ss_pred ccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy13786 66 FPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLL 142 (219)
Q Consensus 66 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (219)
...+.+|.+. |.++.+.++..+.+.++..+++++.|++.||+|||+++..+.++..++++.+.+++|++.+++.|++
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 3344556555 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.|++.+...+...+++.|++|++ +|++++++...+..+|..++|++++.+ +||+.|++.++++++..+..+
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAG---KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChh---hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888999999999999 999999999999999999999998876 999999998887776655443
No 7
>KOG1330|consensus
Probab=99.87 E-value=1.6e-22 Score=159.99 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=154.8
Q ss_pred HHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH
Q psy13786 46 LIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC 122 (219)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~ 122 (219)
..+......+...++..+.+.....++..+ |+++...|++++.+.+.+.+++|++|+++||+.||+++.+|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 344455556667777888887777777766 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hh
Q psy13786 123 GWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WY 197 (219)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w 197 (219)
+.+.+++++.+|++.++|.+.|+|.+...++.+++++|.+|.+ +|++++++.+.+..+|+.+|.+.+..+ .|
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~---~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD---KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcch---hhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 9999999999999999999999999999999999999999999 999999999999999999998888877 59
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy13786 198 TTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~ 218 (219)
||.|+..+++.++..++..++
T Consensus 188 r~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhh
Confidence 999999999999888877654
No 8
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.86 E-value=2.4e-20 Score=151.05 Aligned_cols=143 Identities=16% Similarity=0.146 Sum_probs=130.2
Q ss_pred cchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy13786 69 VALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGL 145 (219)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 145 (219)
+.+|.+. |.++++.++..+...++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 120 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGL 120 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 3445444 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
+.+...+....++.|++|++ +|++++++...+.++|..++|.+++.+ +||+.|++.++++++..+.
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPR---TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999999999999999999999999887 9999999887766655443
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.86 E-value=2.1e-20 Score=154.02 Aligned_cols=171 Identities=27% Similarity=0.365 Sum_probs=141.7
Q ss_pred chHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCC--------hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc
Q psy13786 42 TLFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLT--------IDQASWFASISAITMPIGCLLSGPIIDKYGRK 110 (219)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr 110 (219)
+.++.+...+.+.+..+...++.....+.++... +.+ ..+.+++.+.+.++..+++++.|+++||+|||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 101 (481)
T TIGR00879 22 TYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK 101 (481)
T ss_pred ccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH
Confidence 3455555566666666777777777776666554 444 88999999999999999999999999999999
Q ss_pred hhhhHhhHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH
Q psy13786 111 SALMITNVPSLCGWLLMATK---SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL 187 (219)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 187 (219)
+++..+.++..++.+++... .+++.+++.|++.|++.+...+....++.|++|++ +|++++++.+.+..+|..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 102 KSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKA---LRGALTSLYQLAITFGILV 178 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChh---hhhhhhhHHHHHHHHHHHH
Confidence 99999999999988888553 34558899999999999999999999999999999 9999999999999999999
Q ss_pred HHHHh---hhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 188 SYLTG---AFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 188 ~~~~~---~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
++.++ ... +||+.|++.++..++..+..
T Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99998 443 89999999666655554433
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.86 E-value=3.8e-20 Score=150.29 Aligned_cols=170 Identities=25% Similarity=0.333 Sum_probs=148.2
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
.++++.....+.+..+.++++....+...|.+. |.++.+.+++.+...++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 345666677777777777877777777777665 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----
Q psy13786 120 SLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---- 195 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---- 195 (219)
..++.+++.++++++.+.+.|++.|++.+...+....++.|.+|++ +|++++++.+.+..+|..+++.++..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR---LRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9998888889999999999999999999999999999999999999 999999999999999999999888666
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~~ 215 (219)
+|++.|++.++..++..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLL 186 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 89999988776655554433
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.86 E-value=2.5e-20 Score=150.77 Aligned_cols=166 Identities=21% Similarity=0.236 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHH
Q psy13786 44 FRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPS 120 (219)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~ 120 (219)
++++.....+.+..+.++++.....+..|.+. |.++.+.+++.+...++..+++++.|+++||+|||+++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34455556666777777777777777777776 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h
Q psy13786 121 LCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W 196 (219)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~ 196 (219)
+++.+++.++++++.+++.|++.|++.+...+....++.|.+|++ +|+++.++.+.+..+|..+++.++..+ +
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH---LRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999 999999999999999999999888776 4
Q ss_pred --hHHHHHHHHHHHHHHH
Q psy13786 197 --YTTVAYIGAFVSFLSL 212 (219)
Q Consensus 197 --w~~~~~~~~~~~~~~~ 212 (219)
||+.|++.++..++..
T Consensus 165 ~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 165 DGWRALFFISILPIIFAL 182 (405)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 9999987665555443
No 12
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.85 E-value=6.3e-20 Score=151.99 Aligned_cols=169 Identities=23% Similarity=0.329 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHhhhhhhccccccccchhhcc-----------cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchh
Q psy13786 44 FRLIYLGLIVILPGVAPGMSFGFPAVALPQMS-----------YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSA 112 (219)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~ 112 (219)
+........+.++.+..+++...+++..|.+. +.++.+.+++.+.+.++..+++++.|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455566666777888998888887766443 5677899999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHhh------------hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHH
Q psy13786 113 LMITNVPSLCGWLLMATK------------SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIA 180 (219)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 180 (219)
+..+.++..++.+.+++. +.+..+++.|++.|++.|...+...+++.|++|++ +|++++++.+.+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~---~rg~~~~~~~~~ 164 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH---IRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh---hhhHHHHHHHHH
Confidence 999999988888777652 22567789999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhhh------------hhHHHHHHHHHHHHHHHHHH
Q psy13786 181 LTSGILLSYLTGAFF------------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 181 ~~~g~~~~~~~~~~~------------~w~~~~~~~~~~~~~~~~~~ 215 (219)
..+|..+++.++... +||+.|++.+++.++..+..
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH
Confidence 999999887765422 79999998877776665443
No 13
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.85 E-value=9.8e-20 Score=148.34 Aligned_cols=160 Identities=17% Similarity=0.147 Sum_probs=139.4
Q ss_pred HHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh
Q psy13786 54 ILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK 130 (219)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~ 130 (219)
.+..+........+.+.+|.+. +.+..+.++..+.+.++..+++++.|+++||+|||+++..+..+..++.+++..+
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 3444445555666777777665 8899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHH
Q psy13786 131 SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAF 206 (219)
Q Consensus 131 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 206 (219)
++++.+++.|+++|++.+...+....++.|.+|++ +|++.+++.+....+|..++|.+++.+ +||+.|++.++
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~ 178 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT---KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAV 178 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999998876677778899999999 999999999999999999999998876 89999999888
Q ss_pred HHHHHHHHHH
Q psy13786 207 VSFLSLVLVA 216 (219)
Q Consensus 207 ~~~~~~~~~~ 216 (219)
..++..+..+
T Consensus 179 ~~~i~~~~~~ 188 (413)
T PRK15403 179 MGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHH
Confidence 7777665443
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.85 E-value=6.7e-20 Score=150.17 Aligned_cols=166 Identities=24% Similarity=0.270 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHhhhhhhccccccccchhhcc-c-----CChhhHHH---HHHHHHHHHHHHHhhHhHhhhhhCCchhhh
Q psy13786 44 FRLIYLGLIVILPGVAPGMSFGFPAVALPQMS-Y-----LTIDQASW---FASISAITMPIGCLLSGPIIDKYGRKSALM 114 (219)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~---~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~ 114 (219)
.+++.......++.+.+.++...++...|.+. . .+..+.+. ..+...++..++++++|+++||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 34555555666677778888887776666554 2 34444333 344455556699999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHH
Q psy13786 115 ITNVPSLCGWLLMATKSDLI--------NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGIL 186 (219)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 186 (219)
++.+++.++.+++++++++. .+++.|+++|++.|...+...+++.|++|++ +|++..++.+.+...|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~---~rg~~~~~~~~~~~~G~~ 174 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG---RKGFYASFQYVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC---cccHHHHHHHHHHHHHHH
Confidence 99999999999999887763 5888999999999999999999999999999 999999988888877777
Q ss_pred HHHHHhhh------------hhhHHHHHHHHHHHHHHH
Q psy13786 187 LSYLTGAF------------FWYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 187 ~~~~~~~~------------~~w~~~~~~~~~~~~~~~ 212 (219)
+++.+... .+||+.|++.+++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH
Confidence 77654322 189999998777766543
No 15
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.85 E-value=1.3e-20 Score=155.78 Aligned_cols=168 Identities=14% Similarity=-0.016 Sum_probs=140.2
Q ss_pred HHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH
Q psy13786 46 LIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC 122 (219)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~ 122 (219)
.+.....+.+.+.....+....+...|.+. |.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 344455666666666667777777777665 89999999999999999999999999999999999999888888777
Q ss_pred HHHHHHh-----hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--
Q psy13786 123 GWLLMAT-----KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-- 195 (219)
Q Consensus 123 ~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-- 195 (219)
..+..+. +++++.+++.|++.|++.+...+....++.|++|++ +||+++++.+.+..+|..+++.+....
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR---KRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc---ceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 7766554 589999999999999999999999999999999999 999999999999999999988877543
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 -----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 -----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+|+..|.+.+++.++..++.+
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHH
Confidence 488888887777666555443
No 16
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.5e-20 Score=147.54 Aligned_cols=173 Identities=17% Similarity=0.166 Sum_probs=157.5
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
++.|+.+.+.+.+++.......-..+...|.+. ++|.+|.|.+.+.+.+.+.++..+.|.++||.+.|+.+..+.++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 344566777777888887777777788888777 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHh--hhh--
Q psy13786 120 SLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTG--AFF-- 195 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~-- 195 (219)
.++.+++++++++.+.+.+..++.|..+|...|.+...+++++|++ +||+..+++|++.++|+.+.|++. +.+
T Consensus 104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~---eRG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK---ERGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc---ccCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 999999999999999999998888 555
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 196 --WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 196 --~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
+||..|++.++++++..+..++.
T Consensus 181 ~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 181 HGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998887776653
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.84 E-value=1e-19 Score=148.70 Aligned_cols=158 Identities=23% Similarity=0.267 Sum_probs=140.0
Q ss_pred HHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH
Q psy13786 47 IYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG 123 (219)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~ 123 (219)
+.....+.+..+..+++.....+..|.+. |.++.+.++..+.+.++..+++++.|+++||+|||+++.++.+...++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 33345556666677777777777777665 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHH
Q psy13786 124 WLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTT 199 (219)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 199 (219)
.++.+++++++.++++|++.|++.+...+....++.|.+|++ +|++++++.+.+..+|..+++.+...+ +||+
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~ 173 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH---LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRA 173 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh---HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHH
Confidence 999999999999999999999999999999999999999999 999999999999999999998887765 8999
Q ss_pred HHHHHHHH
Q psy13786 200 VAYIGAFV 207 (219)
Q Consensus 200 ~~~~~~~~ 207 (219)
.|++..+.
T Consensus 174 ~f~i~~~~ 181 (426)
T PRK12307 174 AFFVGLLP 181 (426)
T ss_pred HHHHHHHH
Confidence 99875543
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.84 E-value=7.7e-20 Score=146.63 Aligned_cols=149 Identities=15% Similarity=0.051 Sum_probs=123.0
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRL 141 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
..+++.+|.+. |.++.+.+++.+.+.+++.+++++.|+++||+|||+++..+......+.......+++..+++.|+
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34456666666 899999999999999999999999999999999998876655555444333333478999999999
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+.|++.+. .........|++|++ +|++++++.+.+..+|..+++.++..+ +||+.|++.++++++..++.++
T Consensus 88 l~G~g~~~-~~~~~~~~~~~~~~~---~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 88 LAALGQPF-LLNAFAPAASQIREE---RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHhHhHH-HHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999985 455666679999999 999999999999999999999998887 9999999988887777665544
No 19
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.83 E-value=2.4e-19 Score=149.52 Aligned_cols=172 Identities=16% Similarity=0.131 Sum_probs=145.0
Q ss_pred chHHHHHHHHHHHHhhhhhhccccccccchhhcc--------cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhh
Q psy13786 42 TLFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS--------YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSAL 113 (219)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~ 113 (219)
..+.++....++.++.+.++++....+...|.+. +.++.+.+++.+...++..+++++.|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3456677777888888999999888776666543 23455778999999999999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHhhhh------HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH
Q psy13786 114 MITNVPSLCGWLLMATKSD------LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL 187 (219)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 187 (219)
.++.++..++.++++++++ ++.++++|++.|++.|...+..+.++.|.+|++ +|+++.++.+....+|..+
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~~~g~~~ 166 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK---WRGAMMAAVFAMQGFGILA 166 (502)
T ss_pred HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh---hHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888765 678999999999999999999999999999999 9999999999999999888
Q ss_pred HHHHhhhh---------------------------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 188 SYLTGAFF---------------------------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 188 ~~~~~~~~---------------------------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
++.++..+ +||+.+.+.++++++..+..+
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~ 222 (502)
T TIGR00887 167 GAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL 222 (502)
T ss_pred HHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88765421 599999888877766655443
No 20
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.83 E-value=2.9e-19 Score=148.62 Aligned_cols=160 Identities=20% Similarity=0.260 Sum_probs=128.5
Q ss_pred HHHHHHHhhhhhhccccccccchhhcc---c--CChhh--HHH--HHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 49 LGLIVILPGVAPGMSFGFPAVALPQMS---Y--LTIDQ--ASW--FASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~--~~~--~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
......++.++.+++...++...|.+. + .++.. .+. ..++..++..++++++|+++||+|||+++.++.++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 344556677788888888777777654 2 22211 111 24777899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHH--------HHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHH
Q psy13786 120 SLCGWLLMATKSDLIN--------LYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLT 191 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 191 (219)
++++.+++++++|+.. +++.|+++|++.|+..+....++.|++|++ +||+..++...+..+|..+++.+
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~~~G~~lg~~~ 173 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR---KRGFMGSWLDFGSIAGFVLGAGV 173 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 788999999999999999999999999999 99999999888877777777644
Q ss_pred hhh------------hhhHHHHHHHHHHHHHH
Q psy13786 192 GAF------------FWYTTVAYIGAFVSFLS 211 (219)
Q Consensus 192 ~~~------------~~w~~~~~~~~~~~~~~ 211 (219)
... .+||+.|++.+++.++.
T Consensus 174 ~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~ 205 (490)
T PRK10642 174 VVLISTIVGEANFLDWGWRIPFFIALPLGIIG 205 (490)
T ss_pred HHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH
Confidence 321 18999999977655543
No 21
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.83 E-value=4.4e-20 Score=153.10 Aligned_cols=163 Identities=15% Similarity=0.237 Sum_probs=144.7
Q ss_pred HHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH
Q psy13786 51 LIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM 127 (219)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~ 127 (219)
..+.++.+...++....++..|.+. |.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3444555666667777777777776 8889999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHH
Q psy13786 128 ATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYI 203 (219)
Q Consensus 128 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~ 203 (219)
+.+++++.+++.|++.|++.+...+....++.|.+|++ +|+++.++++....+|..++|.+++.+ +||+.|++
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~ 161 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE---KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLI 161 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhh
Confidence 99999999999999999999999999999999999999 999999999999999999999998877 89999998
Q ss_pred HHHHHHHHHHHHH
Q psy13786 204 GAFVSFLSLVLVA 216 (219)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (219)
.+.+.++..++.+
T Consensus 162 ~~~~~~~~~~~~~ 174 (485)
T TIGR00711 162 NVPIGIIVVVVAF 174 (485)
T ss_pred hhHHHHHHHHHHH
Confidence 8777666655443
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.83 E-value=3.2e-19 Score=143.56 Aligned_cols=153 Identities=14% Similarity=0.197 Sum_probs=136.5
Q ss_pred hccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHH
Q psy13786 61 GMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLY 137 (219)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (219)
........+..|.+. |.++.+.+++.+.+.++..+++++.|++.||+|||+.+..+.++..++.+...+.++++.+.
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLL 97 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 344455566677655 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 138 ISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 138 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
+.|++.|++.+...+....++.|.+|++ +|++..++.+....+|..++|.+++.+ +||+.+++.++..++..+
T Consensus 98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (385)
T TIGR00710 98 VLRFVQAFGASAGSVISQALVRDIYPGE---ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHcchhHHHHHHHHHHHHhcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999998876 899999988877766655
Q ss_pred HHH
Q psy13786 214 LVA 216 (219)
Q Consensus 214 ~~~ 216 (219)
..+
T Consensus 175 ~~~ 177 (385)
T TIGR00710 175 LIF 177 (385)
T ss_pred HHH
Confidence 544
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.83 E-value=8e-19 Score=145.40 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=121.4
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRL 141 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
....+..|.+. |++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+...++.++.+++++++.+++.|+
T Consensus 53 ~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~ 132 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRF 132 (476)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 33445555555 899999999999999999999999999999999999999999999999998999999999999999
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh-------------hhhHHHHHHHHHHH
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAF-------------FWYTTVAYIGAFVS 208 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-------------~~w~~~~~~~~~~~ 208 (219)
+.|++.+.. .....++.|++|++ +|++++++.+....+|..+++.+... .+||+.|++.+++.
T Consensus 133 l~G~~~~~~-~~~~~~i~~~~~~~---~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~ 208 (476)
T PLN00028 133 FIGFSLATF-VSCQYWMSTMFNGK---IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLH 208 (476)
T ss_pred HHHHHHHhh-HHHHHHHHHhcChh---heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHH
Confidence 999988764 34566889999999 99999998876666665555433321 17999999988887
Q ss_pred HHHHHHHHh
Q psy13786 209 FLSLVLVAM 217 (219)
Q Consensus 209 ~~~~~~~~~ 217 (219)
++..+..++
T Consensus 209 l~~~l~~~~ 217 (476)
T PLN00028 209 IIMGILVLT 217 (476)
T ss_pred HHHHHHHHH
Confidence 776655543
No 24
>PRK03699 putative transporter; Provisional
Probab=99.83 E-value=3.3e-19 Score=144.40 Aligned_cols=161 Identities=12% Similarity=0.093 Sum_probs=138.4
Q ss_pred HHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH
Q psy13786 52 IVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA 128 (219)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~ 128 (219)
.+.+..+..+.........+|.+. |.++.+.+++.+...++..+++++.|++.||+|||+++..+.++..++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~ 90 (394)
T PRK03699 11 ISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLM 90 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 334455555565666666777766 89999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHH
Q psy13786 129 TKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYI 203 (219)
Q Consensus 129 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~ 203 (219)
++++++.+++.|++.|++.+...+....++.|.+|++ +|++.++..+....+|..++|.+.+.+ +||+.|.+
T Consensus 91 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~ 167 (394)
T PRK03699 91 FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK---QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYAC 167 (394)
T ss_pred HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 9999999999999999999988888899999999999 999999988888888888888877654 89999998
Q ss_pred HHHHHHHHHHHH
Q psy13786 204 GAFVSFLSLVLV 215 (219)
Q Consensus 204 ~~~~~~~~~~~~ 215 (219)
.+++.++..++.
T Consensus 168 ~~~~~~~~~~~~ 179 (394)
T PRK03699 168 IGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHH
Confidence 887766655443
No 25
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.83 E-value=2.5e-19 Score=144.50 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=133.9
Q ss_pred hccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHH
Q psy13786 61 GMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLY 137 (219)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (219)
+.......+.+|.+. |.+..+.++..+...++..+++++.|+++||+|||+++..+.++.+++.++++++++++.++
T Consensus 16 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~ 95 (382)
T PRK10091 16 GMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLA 95 (382)
T ss_pred HhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 333444455566555 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 138 ISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 138 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
+.|++.|++.+...+....++.|++|++ +|++.++....+..+|..++|++++.+ +||+.|++.++..++..+
T Consensus 96 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 172 (382)
T PRK10091 96 IGRLVSGFPHGAFFGVGAIVLSKIIKPG---KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLA 172 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCChH---HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 9999999999988888888999999999 999999999999999999999888776 899999998887766655
Q ss_pred HH
Q psy13786 214 LV 215 (219)
Q Consensus 214 ~~ 215 (219)
..
T Consensus 173 ~~ 174 (382)
T PRK10091 173 SI 174 (382)
T ss_pred HH
Confidence 43
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.82 E-value=7.6e-19 Score=142.76 Aligned_cols=170 Identities=13% Similarity=0.061 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHH
Q psy13786 44 FRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPS 120 (219)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~ 120 (219)
++.+...+.+.+..+...+....+.+.+|.+. |.++.+.++..+.+.++..+++++.|+++||+|||+++..+....
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 44455555666666665566666666676655 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h
Q psy13786 121 LCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W 196 (219)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~ 196 (219)
.++.+....+++++.+++.|++.|++.+...+....++.|.+|++ +|.+..++......+|..++|.+++.+ +
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA---DAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999888888899999999999 999999988888888889999888766 8
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q psy13786 197 YTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 197 w~~~~~~~~~~~~~~~~~~~ 216 (219)
||+.+++.++..++..+..+
T Consensus 166 w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 99999988888776665443
No 27
>PRK10504 putative transporter; Provisional
Probab=99.82 E-value=5.1e-19 Score=146.39 Aligned_cols=158 Identities=16% Similarity=0.153 Sum_probs=138.2
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS 131 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~ 131 (219)
++.+...++.+...+.+|.+. |.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+.+.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 96 (471)
T PRK10504 17 FGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSG 96 (471)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhC
Confidence 344555555666666777766 89999999999999999999999999999999999999999999999888888899
Q ss_pred hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 132 DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 132 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
+.+.+++.|++.|++.+...+....++.|.+|++ +|+++.+..+....+|..++|.+++.+ +||+.|++....
T Consensus 97 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~ 173 (471)
T PRK10504 97 TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE---QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPV 173 (471)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999998877 899999988776
Q ss_pred HHHHHHHH
Q psy13786 208 SFLSLVLV 215 (219)
Q Consensus 208 ~~~~~~~~ 215 (219)
..+..+..
T Consensus 174 ~~l~~~~~ 181 (471)
T PRK10504 174 GIIGAIAT 181 (471)
T ss_pred HHHHHHHH
Confidence 66555444
No 28
>KOG0254|consensus
Probab=99.82 E-value=1e-18 Score=146.06 Aligned_cols=168 Identities=28% Similarity=0.380 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHhhhhhhcc--ccccccchhhcc------cCCh----hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchh
Q psy13786 45 RLIYLGLIVILPGVAPGMS--FGFPAVALPQMS------YLTI----DQASWFASISAITMPIGCLLSGPIIDKYGRKSA 112 (219)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~ 112 (219)
..........+..+..+++ .....+....+. .... .+.+++.+...++..+++++.|+++|++|||+.
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3444445555556666665 344444444333 1111 345899999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy13786 113 LMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTG 192 (219)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 192 (219)
++.+.++..++.+++++++|+..++++|++.|+|.|......+.|++|..|++ .||...+..+....+|..++..++
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~---~RG~l~~~~~l~~~~Gi~~~~~~~ 198 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH---IRGTLVSLYQLFITIGILLGYCIN 198 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChh---hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999999997776
Q ss_pred hhh-----hhHHHHHHHHHHHHHHHHHH
Q psy13786 193 AFF-----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 193 ~~~-----~w~~~~~~~~~~~~~~~~~~ 215 (219)
... +||..+.+..+++++..+..
T Consensus 199 ~~~~~~~~~Wr~~~~~~~i~~~~~~~~~ 226 (513)
T KOG0254|consen 199 YGTSKVYAGWRIPLGLALIPAVILALGM 226 (513)
T ss_pred hhhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 666 49999988888888877763
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.82 E-value=1.2e-18 Score=141.18 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=125.6
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRL 141 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
...++.+|.+. |.|..+.++..+.+.++..+++++.|++.||+|||+++..+..+.+++.+.++++++++.+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 44567777776 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHH
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLS 211 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~ 211 (219)
+.|++.+...+.....+.+.+| + +|+++++.+..+...|..+++.++..+ +||+.+.+.++..++.
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~---~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-Q---RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-c---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999988888999999987 6 799999999888877777777776654 7998877665554433
No 30
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.82 E-value=3.4e-19 Score=141.53 Aligned_cols=150 Identities=24% Similarity=0.338 Sum_probs=131.9
Q ss_pred ccccccccchh-hcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHH
Q psy13786 62 MSFGFPAVALP-QMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLY 137 (219)
Q Consensus 62 ~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (219)
.......+..| .+. |.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..++++.+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 89 (352)
T PF07690_consen 10 FGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLL 89 (352)
T ss_dssp HHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHh
Confidence 33444445555 332 88999999999999999999999999999999999999999999999966666668888899
Q ss_pred HHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 138 ISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 138 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
+.|++.|++.+...+....++.|.+|++ +|++.++..+....+|..++|.+++.+ +||+.|++.++..++..+
T Consensus 90 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 90 IARFLLGIGSGFFSPASNALIADWFPPE---ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTC---CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred hhccccccccccccccccccccccchhh---hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 9999999999999999999999999999 999999999999999999999999987 899999999988888866
Q ss_pred H
Q psy13786 214 L 214 (219)
Q Consensus 214 ~ 214 (219)
+
T Consensus 167 l 167 (352)
T PF07690_consen 167 L 167 (352)
T ss_dssp H
T ss_pred h
Confidence 4
No 31
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.81 E-value=1.3e-18 Score=144.87 Aligned_cols=160 Identities=24% Similarity=0.280 Sum_probs=139.3
Q ss_pred HHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH
Q psy13786 47 IYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG 123 (219)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~ 123 (219)
+.....+.+..+...++.....+..|.+. |.++.+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 98 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33444455555666666666666677665 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHH
Q psy13786 124 WLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTT 199 (219)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~ 199 (219)
.++.+++++++.+.+.|++.|++.+...+....++.|.+|++ +|++++++.+.+..+|..++|.+.+.+ +||+
T Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~ 175 (496)
T PRK03893 99 TLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH---LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA 175 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 999999999999999999999999999999999999999999 999999999999999999999988877 8999
Q ss_pred HHHHHHHHHH
Q psy13786 200 VAYIGAFVSF 209 (219)
Q Consensus 200 ~~~~~~~~~~ 209 (219)
.|++.++..+
T Consensus 176 ~f~~~~~~~~ 185 (496)
T PRK03893 176 LFFIGILPII 185 (496)
T ss_pred HHHHHHHHHH
Confidence 9887544433
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.81 E-value=3e-19 Score=143.53 Aligned_cols=151 Identities=17% Similarity=0.101 Sum_probs=134.3
Q ss_pred cccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHH
Q psy13786 63 SFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYIS 139 (219)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (219)
+....+...|.+. |.++.+.+++.+...++..+++++.|+++||+|||+++..+.++..++..+++++++++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (399)
T TIGR00893 9 DRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYIL 88 (399)
T ss_pred HHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3334444445444 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 140 RLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 140 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
|++.|++.+...+....++.|.+|++ +|++.+++.+....+|..++|.+++.+ +||+.|++.++..++..+..
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPAS---ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLW 165 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHH---HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999 999999999999999999999998876 89999998887776665544
Q ss_pred H
Q psy13786 216 A 216 (219)
Q Consensus 216 ~ 216 (219)
+
T Consensus 166 ~ 166 (399)
T TIGR00893 166 L 166 (399)
T ss_pred h
Confidence 3
No 33
>TIGR00895 2A0115 benzoate transport.
Probab=99.81 E-value=3e-19 Score=143.98 Aligned_cols=164 Identities=23% Similarity=0.322 Sum_probs=138.9
Q ss_pred HHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHH
Q psy13786 49 LGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWL 125 (219)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~ 125 (219)
....+.+..+..++......+..|.+. |.++.+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 97 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTL 97 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 333344444555555555555666655 88999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHH
Q psy13786 126 LMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVA 201 (219)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~ 201 (219)
+..+.++++.+++.|++.|++.+...+...+++.|.+|++ +|++.+++.+....+|..+++.+++.+ +|++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~ 174 (398)
T TIGR00895 98 LCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR---FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLF 174 (398)
T ss_pred HHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHH---hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeeh
Confidence 9889999999999999999999999999999999999999 999999999999999999999998776 899998
Q ss_pred HHHHHHHHHHHHHH
Q psy13786 202 YIGAFVSFLSLVLV 215 (219)
Q Consensus 202 ~~~~~~~~~~~~~~ 215 (219)
++.++..++..+..
T Consensus 175 ~~~~~~~~~~~~~~ 188 (398)
T TIGR00895 175 YVGGIAPLLLLLLL 188 (398)
T ss_pred hhhhhHHHHHHHHH
Confidence 88765555544443
No 34
>TIGR00898 2A0119 cation transport protein.
Probab=99.81 E-value=6.9e-19 Score=146.83 Aligned_cols=138 Identities=20% Similarity=0.281 Sum_probs=128.4
Q ss_pred cCC---hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLT---IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
+++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++..++.++.+++++++.+++.|++.|++.+...+
T Consensus 120 ~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 199 (505)
T TIGR00898 120 DLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWV 199 (505)
T ss_pred cceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHH
Confidence 777 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHH
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~ 216 (219)
....++.|++|++ +|++..++.+.+..+|..+++.++..+ +||+.+++.+++.++..+..+
T Consensus 200 ~~~~~~~e~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 200 QAVVLNTEFLPKK---QRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHHHHhheecChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999988777 999999998888776665543
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.81 E-value=7.8e-19 Score=140.01 Aligned_cols=146 Identities=12% Similarity=0.117 Sum_probs=129.0
Q ss_pred cccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh-----hHHHHHH
Q psy13786 67 PAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS-----DLINLYI 138 (219)
Q Consensus 67 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 138 (219)
..+.+|.+. +.++.+.+++.+...++..+++++.|+++||+|||+++..+.++..++..+..+.+ +++.+++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 334444444 88999999999999999999999999999999999999999998888888877777 9999999
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
.|++.|++.+...+...+++.|.+|++ +|++.+++.+....+|..++|.+++.+ +||+.+++.++..++..+.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEE---QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 999999999999999999999998877 8999998877766655444
Q ss_pred H
Q psy13786 215 V 215 (219)
Q Consensus 215 ~ 215 (219)
.
T Consensus 175 ~ 175 (365)
T TIGR00900 175 I 175 (365)
T ss_pred H
Confidence 3
No 36
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.81 E-value=2.2e-18 Score=139.55 Aligned_cols=150 Identities=15% Similarity=0.163 Sum_probs=130.9
Q ss_pred ccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHH
Q psy13786 62 MSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYI 138 (219)
Q Consensus 62 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (219)
+....+.+.+|.+. |.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+...+.++++.+++
T Consensus 22 ~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (394)
T PRK11652 22 MAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIA 101 (394)
T ss_pred HHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 33444455666655 899999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
.|++.|++.+...+....+..|.++++ +|+++++..+.+..++..++|.+++.+ +||+.|++.++..++..+.
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 102 ASAIQGLGTGVGGVMARTLPRDLYEGT---QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 999999998887788888899999988 999999999999999999999988876 8999999887766555443
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.81 E-value=4.8e-19 Score=141.72 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=127.3
Q ss_pred cccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy13786 67 PAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLS 143 (219)
Q Consensus 67 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 143 (219)
..+..|.+. |.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.++++++++.+++.|++.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLA 101 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
|++.+..++.....+.|++| + +|+++.++.+.+..+|..+++++.... +||+.|++.+++.++..+..++
T Consensus 102 g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFP-D---KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcC-c---ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887778888888887 5 699999999999999987765555444 8999999988887776655543
No 38
>PRK09952 shikimate transporter; Provisional
Probab=99.81 E-value=2.5e-18 Score=141.14 Aligned_cols=160 Identities=18% Similarity=0.158 Sum_probs=127.4
Q ss_pred HHHHHHHHhhhhhhccccccccchhhc-----c-cCChhhHHHHH-----HHHHHHHHHHHhhHhHhhhhhCCchhhhHh
Q psy13786 48 YLGLIVILPGVAPGMSFGFPAVALPQM-----S-YLTIDQASWFA-----SISAITMPIGCLLSGPIIDKYGRKSALMIT 116 (219)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~ 116 (219)
.......+..+.++++...+....|.. . +.++. .++.. ++..++..+++++.|+++||+|||+++..+
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~ 100 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLT 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHH
Confidence 345555567777888877766554421 1 45555 34443 345566789999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHH
Q psy13786 117 NVPSLCGWLLMATKSDLI--------NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLS 188 (219)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 188 (219)
.++++++++++++++++. .+++.|+++|++.|...+....++.|++|++ +|++..+..+.+..+|..++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~---~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 101 VWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN---KKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999876 4888999999999999999999999999999 99999999999999998887
Q ss_pred HHHhhh------------hhhHHHHHHHHHHHHHH
Q psy13786 189 YLTGAF------------FWYTTVAYIGAFVSFLS 211 (219)
Q Consensus 189 ~~~~~~------------~~w~~~~~~~~~~~~~~ 211 (219)
+.+... .+||+.|++.+++.++.
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~ 212 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA 212 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH
Confidence 655432 28999999887765443
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=2.2e-18 Score=139.69 Aligned_cols=146 Identities=20% Similarity=0.275 Sum_probs=121.5
Q ss_pred ccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--------h
Q psy13786 64 FGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--------S 131 (219)
Q Consensus 64 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--------~ 131 (219)
.....+.+|.+. |.++.+.+++.+.+.++..+++++.|+++||+||||++..+.+..+++.+.+.++ .
T Consensus 31 ~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (399)
T PRK05122 31 IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVL 110 (399)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchh
Confidence 334445555432 8899999999999999999999999999999999999999988887766554432 2
Q ss_pred hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 132 DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 132 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
++..+++.|++.|++.+...+....++.|.+|++ +|++++++.+.....|..+++.+++.+ +|++.+++..+.
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 111 SLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL---HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred HHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh---hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 5667889999999999999999899999999999 999999999998999999999888776 899888776665
Q ss_pred HHHHH
Q psy13786 208 SFLSL 212 (219)
Q Consensus 208 ~~~~~ 212 (219)
.++..
T Consensus 188 ~~~~~ 192 (399)
T PRK05122 188 ALLGL 192 (399)
T ss_pred HHHHH
Confidence 54433
No 40
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.80 E-value=2.8e-18 Score=141.39 Aligned_cols=145 Identities=16% Similarity=0.159 Sum_probs=121.0
Q ss_pred cchhhcc--cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh----hhHHHHHHHHHH
Q psy13786 69 VALPQMS--YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK----SDLINLYISRLL 142 (219)
Q Consensus 69 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l 142 (219)
...|.+. |.++.+.++..+...++..+++++.|+++||+|||+++.++.++.+++.+++++. .+++.+++.|++
T Consensus 50 ~~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l 129 (452)
T PRK11273 50 LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL 129 (452)
T ss_pred HhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHH
Confidence 3444433 8999999999999999999999999999999999999999999999888888765 367788899999
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHH-HHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGIL-LSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.|++.+...+.....+.|++|++ +|++++++++.+..+|.. .+|.+.... +||+.|++.+++.++..++.+
T Consensus 130 ~gi~~g~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 130 CGWFQGMGWPPCGRTMVHWWSQK---ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHhccchHHHHHHHHhCChH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888899999999 999999999999998864 455543222 999999998877666544443
No 41
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.80 E-value=4.3e-18 Score=139.75 Aligned_cols=164 Identities=16% Similarity=0.124 Sum_probs=131.6
Q ss_pred HHHHHhhhhhhccccccccchhhcc--cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH
Q psy13786 51 LIVILPGVAPGMSFGFPAVALPQMS--YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA 128 (219)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~ 128 (219)
....+................|.+. |.++++.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~ 109 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMG 109 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHh
Confidence 3333333443333333333444444 99999999999999999999999999999999999999999989888888776
Q ss_pred hh----hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHH
Q psy13786 129 TK----SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTT 199 (219)
Q Consensus 129 ~~----~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~ 199 (219)
.. +++..+.+.|++.|++.+...+.....+.|++|++ +|++++++++....+|..+++.+.... +||+
T Consensus 110 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~ 186 (438)
T TIGR00712 110 FVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS---ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHA 186 (438)
T ss_pred ccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc---cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHH
Confidence 54 46677788999999999988888899999999999 999999999999999998887765542 8999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy13786 200 VAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~ 217 (219)
.|++.++++++..+..++
T Consensus 187 ~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 187 ALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988887776555443
No 42
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.80 E-value=2.6e-18 Score=142.01 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=124.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
++++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++..++.+++.++ .+++.+++.|++.|++.+...+.
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~ 151 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPA 151 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhh
Confidence 6888999999999999999999999999999999999999999988888776543 56778899999999999999999
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
...++.|++|++ +|++++++.+.+..+|..+++++.+.+ +||+.|++.+++.++..++.+
T Consensus 152 ~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 152 THKIIVKWAPPK---ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred HHHHHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHH
Confidence 999999999999 999999999999999999999888766 799999998887776655544
No 43
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.79 E-value=6.4e-18 Score=133.83 Aligned_cols=157 Identities=28% Similarity=0.354 Sum_probs=138.9
Q ss_pred hhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhH
Q psy13786 57 GVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDL 133 (219)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 133 (219)
.+..........+..|.+. |.++.+.++..+...++..+++++.|+++||+|||+.+..+.++..++.+.....+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (352)
T cd06174 8 FFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSL 87 (352)
T ss_pred HHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccH
Confidence 3444445555555666555 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHH
Q psy13786 134 INLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSF 209 (219)
Q Consensus 134 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~ 209 (219)
+.+.+.|++.|++.+...+....++.|.+|++ +|++.+++.+....+|..++|.+++.+ +||+.+++.++..+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPK---ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGL 164 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCcc---chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999999999887 79999998888777
Q ss_pred HHHHHHH
Q psy13786 210 LSLVLVA 216 (219)
Q Consensus 210 ~~~~~~~ 216 (219)
+..+...
T Consensus 165 ~~~~~~~ 171 (352)
T cd06174 165 LLALLLL 171 (352)
T ss_pred HHHHHHH
Confidence 7665543
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.79 E-value=4.8e-18 Score=140.04 Aligned_cols=145 Identities=14% Similarity=0.215 Sum_probs=124.6
Q ss_pred cccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHH-HHHH
Q psy13786 67 PAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYI-SRLL 142 (219)
Q Consensus 67 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 142 (219)
.+...|.+. |.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.++++++++++.+++ .|++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 445566555 899999999999999999999999999999999999999999999999999999999888765 4689
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.|++.+...+....++.++++ + +|++++++.+.+..+|..++|.+++.+ +||+.|++.+++.++..+..
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~---~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~ 190 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-R---RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCG 190 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-h---hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 999988766777788889886 6 799999999999999999999888776 89999999888776655443
No 45
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=1.3e-17 Score=135.97 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=115.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-----SDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~ 150 (219)
|++++|.+++.+++.+++.++.++.|++.||+|.|+++.++.++..+..+..+++ ++++.+++.|++.|++ +..
T Consensus 66 ~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~ 144 (462)
T PRK15034 66 NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GAN 144 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHh
Confidence 8999999999999999999999999999999999999999999999999988886 8999999999999998 668
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHH----HHHHHhhh------------------hhhHHHHHHHHHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGIL----LSYLTGAF------------------FWYTTVAYIGAFVS 208 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~----~~~~~~~~------------------~~w~~~~~~~~~~~ 208 (219)
++.....+++++|++ +||+++|+.....++|.. +.|.+... .+||.+.++..++.
T Consensus 145 f~~~~~~vs~wfp~~---~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 145 FASSMGNISFFFPKA---KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHHHHHHHHHHCCHh---HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 889999999999999 999999998655555554 44443321 13777777777776
Q ss_pred HHHHHHHHh
Q psy13786 209 FLSLVLVAM 217 (219)
Q Consensus 209 ~~~~~~~~~ 217 (219)
++..++.++
T Consensus 222 iv~~i~~~~ 230 (462)
T PRK15034 222 AIATIAAWS 230 (462)
T ss_pred HHHHHHHHH
Confidence 666655554
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.79 E-value=5.8e-18 Score=136.95 Aligned_cols=146 Identities=19% Similarity=0.189 Sum_probs=130.7
Q ss_pred ccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy13786 68 AVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSG 144 (219)
Q Consensus 68 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 144 (219)
.+.+|.+. |.++.+.++..+.+.++..+++++.|+++||+|||+.+..+.+...++...+..+++.+.+++.|++.|
T Consensus 23 ~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 23 LVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35566655 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
++.+...+....++.|.+|++ +|++..+..+....+|..++|.+++.+ +|++.+++.++..++..+..+
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDR---RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 999988889999999999999 999999999999999999999888766 899999988877766655543
No 47
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.78 E-value=5.7e-18 Score=136.15 Aligned_cols=147 Identities=20% Similarity=0.282 Sum_probs=132.7
Q ss_pred cccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy13786 67 PAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLS 143 (219)
Q Consensus 67 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 143 (219)
+.+.+|.+. |.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++...+.+.++++.+.+.|++.
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 89 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLH 89 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 346666655 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
|++.+...+....++.|.+|++ +|++.+++.+....+|..++|.+++.+ +||+.|++.+++.++..+...
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKE---EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999988899999999999999 999999999999999999999988876 899999888877766655443
No 48
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.78 E-value=1.2e-17 Score=135.59 Aligned_cols=136 Identities=20% Similarity=0.272 Sum_probs=125.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.|.+.+...+...+.+++.|+++||+|||+++.++.+...++.+.+...++++.+++.|++.|++.+...+...
T Consensus 42 g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~ 121 (400)
T PRK11646 42 GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRT 121 (400)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888889
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~ 214 (219)
+++.|.+|++ +|++++++.+....+|..++|.+++.+ +|++.|++.++..++..++
T Consensus 122 ~~~~~~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 122 ALVIKLIRPH---QRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999888 8999999887766655443
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.78 E-value=8.7e-19 Score=140.33 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=131.6
Q ss_pred ccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHH
Q psy13786 62 MSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYI 138 (219)
Q Consensus 62 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (219)
.+....+...|.+. |.++.+.+++.+...++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (379)
T TIGR00881 9 LVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAA 88 (379)
T ss_pred HhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34444455555554 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHH-Hhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYL-TGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~-~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
.|++.|++.+...+...+++.|++|++ +|++.+++.+.+..+|..++|. ++..+ +||+.|++.+++.++..+
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRS---ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSL 165 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHh---hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999983 54444 899999888777666544
Q ss_pred HH
Q psy13786 214 LV 215 (219)
Q Consensus 214 ~~ 215 (219)
+.
T Consensus 166 ~~ 167 (379)
T TIGR00881 166 IC 167 (379)
T ss_pred HH
Confidence 44
No 50
>PRK15075 citrate-proton symporter; Provisional
Probab=99.78 E-value=9.9e-18 Score=137.45 Aligned_cols=156 Identities=21% Similarity=0.330 Sum_probs=124.9
Q ss_pred HHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHH-HHHH-----HHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 49 LGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWF-ASIS-----AITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~-----~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
....+.++.+.+.++....+...|.+. +.++.+.+.. .+.. .++..+++++.|+++||+|||++++.+.++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 456666778888899888888888776 6666655433 3222 233357889999999999999999999999
Q ss_pred HHHHHHHHHhhhhHH--------HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHH
Q psy13786 120 SLCGWLLMATKSDLI--------NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLT 191 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 191 (219)
..++.++++++++++ .+++.|++.|++.+...+....++.|++|++ +|++.+++.+....+|..+++.+
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~---~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG---RKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc---cchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998876 3688999999999999998899999999999 99999999888777776666655
Q ss_pred hhhh------------hhHHHHHHHHHH
Q psy13786 192 GAFF------------WYTTVAYIGAFV 207 (219)
Q Consensus 192 ~~~~------------~w~~~~~~~~~~ 207 (219)
+..+ +||++|++..+.
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 5432 899999875443
No 51
>PRK10054 putative transporter; Provisional
Probab=99.78 E-value=1.2e-17 Score=135.32 Aligned_cols=137 Identities=14% Similarity=0.185 Sum_probs=124.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+++.+...++..+++++.|+++||+|||+++.++.+...++.+...+.++++.+++.+.+.|.+.+...+...
T Consensus 39 g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 118 (395)
T PRK10054 39 SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLK 118 (395)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999989888888999999888889888888777778889
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~ 215 (219)
.+..|..|++ +|+++.++.+...++|..++|.+++.+ +|+..|++.++..++..++.
T Consensus 119 ~~~~~~~~~~---~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 119 AWFADNLSST---SKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHhcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999987 89999998887776665444
No 52
>PRK12382 putative transporter; Provisional
Probab=99.78 E-value=2.1e-17 Score=133.77 Aligned_cols=143 Identities=15% Similarity=0.215 Sum_probs=117.8
Q ss_pred ccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---h-----hh
Q psy13786 64 FGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---T-----KS 131 (219)
Q Consensus 64 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~-----~~ 131 (219)
.+...+.+|.+. |.|+.+.+++.+.+.++..+++++.|+++||+||||++..+.+...++.+... . .+
T Consensus 31 ~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (392)
T PRK12382 31 VGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPF 110 (392)
T ss_pred HHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhH
Confidence 334445555421 89999999999999999999999999999999999999988877666544321 1 35
Q ss_pred hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 132 DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 132 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
+++.+++.|++.|++.+...+...+++.|.+|++ +|+++++..+.+...|..++|.+++.+ +|++.+.+..+.
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 111 KFALLVVGRLILGFGESQLLTGALTWGLGLVGPK---HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc---ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 7888999999999999988888888999999999 999999999999999999999998876 898876665444
Q ss_pred HH
Q psy13786 208 SF 209 (219)
Q Consensus 208 ~~ 209 (219)
.+
T Consensus 188 ~~ 189 (392)
T PRK12382 188 PL 189 (392)
T ss_pred HH
Confidence 33
No 53
>PRK10133 L-fucose transporter; Provisional
Probab=99.78 E-value=2.2e-17 Score=135.40 Aligned_cols=136 Identities=15% Similarity=0.054 Sum_probs=117.1
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH---H
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM---A 128 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~---~ 128 (219)
+..+..++......+..|.++ |.++.+.++..+.+.+++.+++++.|++.||+|||+++..+..++.++.+++ .
T Consensus 33 ~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~ 112 (438)
T PRK10133 33 SLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA 112 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555566677766 9999999999999999999999999999999999999999999999998875 4
Q ss_pred hhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 129 TKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 129 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
.+++++.++++|+++|++.+...+..+.++.|..|++ +|.+.++..+..+.+|..+++.++.
T Consensus 113 ~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~---~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 113 EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES---SGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999987777 7777888899999999988887753
No 54
>PRK11043 putative transporter; Provisional
Probab=99.78 E-value=1.8e-17 Score=134.54 Aligned_cols=151 Identities=17% Similarity=0.134 Sum_probs=131.4
Q ss_pred cccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHH
Q psy13786 63 SFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYIS 139 (219)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (219)
....+.+.+|.+. |.++.+.++..+++.++..+++++.|+++||+|||+.+..+.++..++.+...++++++.+.+.
T Consensus 21 ~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (401)
T PRK11043 21 ATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVL 100 (401)
T ss_pred HHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3445556666555 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 140 RLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 140 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
|++.|++.+...+....++.|.+|++ +|++..+..+....+|..++|.+++.+ +||+.+++.++..++..+..
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQ---KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 99999998877777788999999999 899999988888888999999888876 99999998887776665544
Q ss_pred H
Q psy13786 216 A 216 (219)
Q Consensus 216 ~ 216 (219)
+
T Consensus 178 ~ 178 (401)
T PRK11043 178 L 178 (401)
T ss_pred H
Confidence 3
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=1.4e-17 Score=135.59 Aligned_cols=161 Identities=14% Similarity=0.043 Sum_probs=137.3
Q ss_pred HHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH
Q psy13786 52 IVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA 128 (219)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~ 128 (219)
.+....+..++......+..|.++ |.++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.++.+++.+++.
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~ 86 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW 86 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 334445556666667677888777 99999999999999999999999999999999999999999999999988764
Q ss_pred h---hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----------
Q psy13786 129 T---KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---------- 195 (219)
Q Consensus 129 ~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---------- 195 (219)
. .++++.+++.|++.|++.|...+..++++.+..|++ +|++..++.+...++|..++|.++..+
T Consensus 87 ~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 87 PAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES---TATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred HHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 4 468899999999999999999999999999999999 999999999999999999998886644
Q ss_pred --------------------hhHHHHHHHHHHHHHHHHHH
Q psy13786 196 --------------------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 196 --------------------~w~~~~~~~~~~~~~~~~~~ 215 (219)
+||++|++.+++.++..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999988887666654443
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.78 E-value=2.7e-17 Score=133.54 Aligned_cols=154 Identities=24% Similarity=0.240 Sum_probs=128.1
Q ss_pred hhhccccccccchhhcc---cCChhh-----HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh
Q psy13786 59 APGMSFGFPAVALPQMS---YLTIDQ-----ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK 130 (219)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~ 130 (219)
..+.......+.+|.+. |.+..+ .+++.+...++..+++++.|+++||+|||+++..+.+...++.++....
T Consensus 25 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 104 (408)
T PRK09874 25 LTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA 104 (408)
T ss_pred HHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445556666655 666544 4788899999999999999999999999999999999999998888889
Q ss_pred hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHH
Q psy13786 131 SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAF 206 (219)
Q Consensus 131 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 206 (219)
++++.+++.|++.|++.+ ..+....++.|.+|++ +|+++++..+....+|..++|.+++.+ +||+.+++.++
T Consensus 105 ~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (408)
T PRK09874 105 QNIWQFLILRALLGLLGG-FVPNANALIATQVPRN---KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180 (408)
T ss_pred hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999999999999999755 5677778889999999 999999999999999999999998876 89999998887
Q ss_pred HHHHHHHHHH
Q psy13786 207 VSFLSLVLVA 216 (219)
Q Consensus 207 ~~~~~~~~~~ 216 (219)
..++..+..+
T Consensus 181 ~~~~~~~~~~ 190 (408)
T PRK09874 181 VLFLCFLVTL 190 (408)
T ss_pred HHHHHHHHHH
Confidence 7666655443
No 57
>KOG0255|consensus
Probab=99.77 E-value=7e-18 Score=141.37 Aligned_cols=135 Identities=23% Similarity=0.197 Sum_probs=123.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+.+.....+..+++.+|..+|++++|+++||+|||++++++.++..++.+..++++|++.+.+.|++.|++.++......
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhH
Confidence 77888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~ 214 (219)
.++.|+++++ +|+.+..+ ......++.+++..++++ +||+.+++..++.++.+++
T Consensus 194 ~~~~E~~~~~---~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 194 GLVAEIVSPK---QRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred hhheeecCcc---hhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999 666666666666666666 8999999998888777655
No 58
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.76 E-value=4.5e-17 Score=131.41 Aligned_cols=123 Identities=12% Similarity=0.192 Sum_probs=117.6
Q ss_pred cCChhh-HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQ-ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|+++++ .|.+.+++..++.++.++.|+++||+|.|+++.++.+.+.+..++.+++++...+.+.|++.|++.|... ..
T Consensus 57 glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~ 135 (511)
T TIGR00806 57 NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AY 135 (511)
T ss_pred CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAY 202 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~ 202 (219)
..++..++|++ +|+++++..+.+..+|.+++++++..+ +||+...
T Consensus 136 ~syI~~WfP~k---ER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~ 183 (511)
T TIGR00806 136 SSYIFSLVPPS---RYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYST 183 (511)
T ss_pred HHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 99999999999 999999999999999999999998877 8876543
No 59
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.76 E-value=2.6e-17 Score=131.74 Aligned_cols=144 Identities=12% Similarity=0.073 Sum_probs=117.2
Q ss_pred ccccccchhh-cc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh-hHHHHHH
Q psy13786 64 FGFPAVALPQ-MS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS-DLINLYI 138 (219)
Q Consensus 64 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 138 (219)
.....+..|. +. |.++.+.+++.+...++..+++++.|+++||+|||+.+.++.++..++.+++++++ +++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLL 96 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3444566664 33 99999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--------------hhHHHH-HH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--------------WYTTVA-YI 203 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~-~~ 203 (219)
.|++.|++.+ ..+....++.|++|++ +|++.+++......+|..+++.++..+ +||+.+ +.
T Consensus 97 ~~~~~g~~~~-~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~ 172 (366)
T TIGR00886 97 LRLFIGIAGG-SFASCMPWISFFFPKK---IQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIV 172 (366)
T ss_pred HHHHHHHhch-hhHhHHHHHHHhcCHh---hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHH
Confidence 9999999865 4566788999999999 999999998866666666555554332 599988 43
Q ss_pred HHHHHHHH
Q psy13786 204 GAFVSFLS 211 (219)
Q Consensus 204 ~~~~~~~~ 211 (219)
.++...+.
T Consensus 173 ~~~~~~~~ 180 (366)
T TIGR00886 173 PAGILLLP 180 (366)
T ss_pred HHHHHHHH
Confidence 34444333
No 60
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.76 E-value=2.1e-17 Score=137.59 Aligned_cols=152 Identities=22% Similarity=0.347 Sum_probs=124.0
Q ss_pred ccccccccchhhcc-cCC-hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHH
Q psy13786 62 MSFGFPAVALPQMS-YLT-IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYIS 139 (219)
Q Consensus 62 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (219)
+.....+..++.+. ++. ..+..|+.+...++..+++++.|+++|.+|||..++.+.++..++.+.++.++|...++.+
T Consensus 58 ~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag 137 (599)
T PF06609_consen 58 FVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAG 137 (599)
T ss_pred HHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHH
Confidence 33434444555544 222 3567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 140 RLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 140 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
..+.|++.|... .....++|..|.| .|..+.++......+....++.++..+ +|||.|++..+...+.+++.
T Consensus 138 ~~l~GvgaG~~~-~~~~~isEl~p~k---~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 138 MVLYGVGAGVQE-LAALAISELVPNK---WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHHHHHhhHHHH-HHHHHHHHhcccc---hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 999999976654 4566789999999 999888877776666666777777655 89999999998887777665
Q ss_pred Hh
Q psy13786 216 AM 217 (219)
Q Consensus 216 ~~ 217 (219)
++
T Consensus 214 ~~ 215 (599)
T PF06609_consen 214 FF 215 (599)
T ss_pred HH
Confidence 44
No 61
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.75 E-value=7.7e-17 Score=133.46 Aligned_cols=137 Identities=12% Similarity=0.079 Sum_probs=122.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.+.+.+.+.|++.|...+..
T Consensus 44 g~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 123 (475)
T TIGR00924 44 GFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANP 123 (475)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCH
Confidence 7899999999999999999999999999999 899999999999999999999998888888899999999999999999
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 212 (219)
.++++|.+|++|..+|+++.++.+.+.++|..++|.+++.+ +|++.|.+.++..++..
T Consensus 124 ~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 124 SSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 99999999876211388899999999999999999999887 89999998776555443
No 62
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.75 E-value=4.4e-17 Score=135.17 Aligned_cols=131 Identities=14% Similarity=0.102 Sum_probs=114.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATKSDLIN-LYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~~~~~~~~~ 153 (219)
|.+..+.+++.+.+.....+..+++|+++|| +||||++.++.+++.++.++++++.+... +++.|+++|++.|...+.
T Consensus 46 g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~ 125 (489)
T PRK10207 46 GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKAN 125 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCC
Confidence 8899999999999998888888999999999 99999999999999999999998766444 557899999999999999
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
..+++.|.+|+++. +|+++.++++.+.++|..++|.+++++ |||+.|++.++.
T Consensus 126 ~~~li~~~~p~~~~-~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 126 PASLLSKCYPPKDP-RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHHHHHHhcCCCch-hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 99999999988710 247788899999999999999988888 999999886543
No 63
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.75 E-value=6.4e-17 Score=130.50 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=124.1
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS 131 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~ 131 (219)
...+..+.......+.+|.+. |.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++...+++++
T Consensus 13 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PRK03633 13 CGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV 92 (381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334455566666677777776 88999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 132 DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 132 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+++.+++.|++.|++.+...+.....+.+..+++ +|+++++.++.+..+|..++|.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR---NRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999988888888888889998 999999999999999999999999877
No 64
>KOG2533|consensus
Probab=99.75 E-value=3.5e-17 Score=134.48 Aligned_cols=140 Identities=15% Similarity=0.059 Sum_probs=129.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
++...+.+.+.+++.++++++.++++.+.||++..+.+....+++.+..++....+|++.+++.|++.|+..+..+|...
T Consensus 77 ~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 77 KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHH
Confidence 67888999999999999999999999999999999999988888888888888899999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----------WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----------~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
.+++.++.++ +|++.++++.++..+|++++.+++..+ ||||.|++.++++++..++.+++
T Consensus 157 ~~lg~wy~~~---e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 157 AILGNWYGKS---ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred HHHHhhcChh---hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEE
Confidence 9999999999 999999999999999999999998872 99999999999988887766543
No 65
>KOG0252|consensus
Probab=99.73 E-value=1.4e-17 Score=132.06 Aligned_cols=171 Identities=15% Similarity=0.118 Sum_probs=140.7
Q ss_pred CCchHHHHHHHHHHHHhhhhhhccccccccchhhcc-----------cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC
Q psy13786 40 TPTLFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS-----------YLTIDQASWFASISAITMPIGCLLSGPIIDKYG 108 (219)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G 108 (219)
....|+....+.+..++.+.++|+...++...+.+. ++++...+.+..+.++|.++|++.+|++.||+|
T Consensus 33 ~g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~G 112 (538)
T KOG0252|consen 33 EGLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFG 112 (538)
T ss_pred cchhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 345688888888999999999999998887766554 256777889999999999999999999999999
Q ss_pred CchhhhHhhHHHHHHHHHHHhh-------hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHH
Q psy13786 109 RKSALMITNVPSLCGWLLMATK-------SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIAL 181 (219)
Q Consensus 109 rr~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 181 (219)
||+++...++++.++.+++++. .-++.+...|++.|+|.|+-+|...+..+|....+ .||...+..-+.+
T Consensus 113 RK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~---~RGa~iaavFa~Q 189 (538)
T KOG0252|consen 113 RKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKK---TRGAFIAAVFAMQ 189 (538)
T ss_pred chhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhc---cccceeEEEEEec
Confidence 9999999999999999877763 12467788899999999999999999999999999 9999998776666
Q ss_pred HHHHHHHHHHhhhh-------------------hhHHHHHHHHHHHHHHHH
Q psy13786 182 TSGILLSYLTGAFF-------------------WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 182 ~~g~~~~~~~~~~~-------------------~w~~~~~~~~~~~~~~~~ 213 (219)
+.|...|.+++..+ -||..+.+..+++++.+.
T Consensus 190 g~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 190 GFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred chhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665554433 488888877776655543
No 66
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.73 E-value=1.2e-16 Score=129.47 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=111.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+.++.+.+++.+.+.+++.+.+++.|+++||+|||+++.++.++.+++.+.+.+..+. ++.|+++|++.+...|...
T Consensus 34 ~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~ 110 (393)
T PRK11195 34 HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKY 110 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999999999998888877766654 6789999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAF 206 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~ 206 (219)
+++.|++|++ +|++++++.+....+|..++|.+++.+ .|+..+.+.+.
T Consensus 111 a~i~~~~~~~---~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~ 161 (393)
T PRK11195 111 GILTELLPGE---KLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCAL 161 (393)
T ss_pred HHHHHHcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999988 44444444443
No 67
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.73 E-value=4.2e-17 Score=138.95 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=133.5
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS 131 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~ 131 (219)
+..+......+.....++.+. ++++.+.|++.+.+.+++.++.++.+++.||+|||+.+.++.++++++++++++.+
T Consensus 40 ~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 40 CAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 344444444556666777666 89999999999999999999999999999999999999999999999999887653
Q ss_pred ---------------------------------------------------hHHHHHHHHHHHhhhhhcchhhhhhhhhh
Q psy13786 132 ---------------------------------------------------DLINLYISRLLSGLSVGLATTPAAVYAAE 160 (219)
Q Consensus 132 ---------------------------------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 160 (219)
.+..++++|+++|+|.+..++...+++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 24567789999999999999999999999
Q ss_pred ccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----h---------------------hHHHHHHHHHHHHHHHHH
Q psy13786 161 CITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----W---------------------YTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~---------------------w~~~~~~~~~~~~~~~~~ 214 (219)
++|++ +|++.+++.+....+|..+++++++.+ + |+..|++.+++.++..+.
T Consensus 200 ~~~~~---~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 200 FAKSK---NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred cCCcc---ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999999999999999999888765 1 666788777776666554
Q ss_pred HH
Q psy13786 215 VA 216 (219)
Q Consensus 215 ~~ 216 (219)
.+
T Consensus 277 l~ 278 (633)
T TIGR00805 277 FF 278 (633)
T ss_pred HH
Confidence 33
No 68
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.73 E-value=1.9e-16 Score=127.12 Aligned_cols=157 Identities=17% Similarity=0.084 Sum_probs=123.9
Q ss_pred hhhhccccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhH-hhHHHHHHHHHHHhhhh
Q psy13786 58 VAPGMSFGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMI-TNVPSLCGWLLMATKSD 132 (219)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~-~~~~~~~~~~~~~~~~~ 132 (219)
+..+...+...+.+|.+. |.++.+.+++.+.+.+...+.+++.|+++||+||||.++. +.+...++.++.+++++
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRN 86 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcch
Confidence 333444444455555432 8899999999999999999999999999999999987654 55666677778888899
Q ss_pred HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhH--HHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHH
Q psy13786 133 LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSL--STWSTIALTSGILLSYLTGAFF----WYTTVAYIGAF 206 (219)
Q Consensus 133 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~ 206 (219)
++.+++.|++.|.+.+...+....+..|..|++ .|++. .+......++|..++|.+++.+ +||+.|++.++
T Consensus 87 ~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 87 YFLLLVLGVLLSSFASTANPQLFALAREHADRT---GREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc---chhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 999989999988887777888888888988877 67654 5777778888999999888876 89999999888
Q ss_pred HHHHHHHHHHh
Q psy13786 207 VSFLSLVLVAM 217 (219)
Q Consensus 207 ~~~~~~~~~~~ 217 (219)
+.++..+..++
T Consensus 164 ~~~~~~~~~~~ 174 (375)
T TIGR00899 164 AFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHH
Confidence 77666655443
No 69
>PTZ00207 hypothetical protein; Provisional
Probab=99.72 E-value=6.6e-16 Score=129.28 Aligned_cols=138 Identities=18% Similarity=0.142 Sum_probs=116.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh------hhHHHHHHHHHHHhhhhhc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK------SDLINLYISRLLSGLSVGL 149 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~G~~~~~ 149 (219)
|++..+.+++.+.. ....+.+++.|++.||+|||+++.++.++..++.++++++ ++++.+.+.|++.|++.+.
T Consensus 58 gls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~ 136 (591)
T PTZ00207 58 NLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCML 136 (591)
T ss_pred CcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHH
Confidence 99999999888763 3444677789999999999999999999999999999986 6899999999999999998
Q ss_pred chhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH-HHHHhhhh--hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 150 ATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL-SYLTGAFF--WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
..+.....+.+++| + +||++.|+.....++|+.+ +++..... +|+..|++.++..++..++.+++
T Consensus 137 ~~~~~~~~i~~~Fp-~---~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 137 FDLGAVVTVLSVFP-S---NRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHhCh-h---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 88888999999997 5 6999999999999999975 55555555 88888888888877776665543
No 70
>KOG3764|consensus
Probab=99.71 E-value=3.5e-17 Score=127.71 Aligned_cols=141 Identities=19% Similarity=0.193 Sum_probs=132.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+-++.++|++.+...+.+.+..++.|.+.||+|+|-++++|.+.+..+.+++++.++++++++.|.++|+|.+...+...
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
+++++.+|+++ +|++++|+.-.+.++|.+++|++++.+ |.+.+|+++++++++...+-++.
T Consensus 182 amlAd~f~~d~--er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 182 AMLADVFPEDN--ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHHcccch--hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 99999999983 689999999999999999999999988 99999999999999888776653
No 71
>KOG0569|consensus
Probab=99.70 E-value=1e-15 Score=124.71 Aligned_cols=173 Identities=28% Similarity=0.377 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc-----------c--CChhh----HHHHHHHHHHHHHHHHhhHhHhhh
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS-----------Y--LTIDQ----ASWFASISAITMPIGCLLSGPIID 105 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d 105 (219)
.++.....+...++.+-++|.....++..+.+. | .++++ .+.+.+.+.+|.++|+...++++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666777888888887775544333 3 33333 356778899999999999999999
Q ss_pred hhCCchhhhHhhHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHH
Q psy13786 106 KYGRKSALMITNVPSLCGWLLMAT---KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALT 182 (219)
Q Consensus 106 ~~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 182 (219)
|+|||..+.++.++..++.++..+ .+++.+++++|++.|+..|......+.|+.|..|++ .||....+.+.+..
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~---~RG~~g~~~~~~~~ 162 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKN---LRGALGTLLQIGVV 162 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhh---hccHHHHHHHHHHH
Confidence 999999999998888887777665 578899999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 183 SGILLSYLTGAFF------WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 183 ~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
+|..++..++..- .|.+.+....+++++.++...++
T Consensus 163 ~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~ 204 (485)
T KOG0569|consen 163 IGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFL 204 (485)
T ss_pred HHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 9999997766543 79999999988888887776553
No 72
>KOG2532|consensus
Probab=99.70 E-value=2.9e-16 Score=128.63 Aligned_cols=139 Identities=17% Similarity=0.219 Sum_probs=128.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS--DLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
+.++.+.+++.+.++.|+++++.+.|++.||+|-|+++.++.++.++..++...+. +++.+++.|+++|++.|..+|.
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa 148 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPA 148 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhh
Confidence 78899999999999999999999999999999999999999999999999988764 4457789999999999999999
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
...+...+.|++ +|++..++...+..+|.+++-++++.+ ||+++|++.+++.++..++.++
T Consensus 149 ~~~i~~~W~P~~---Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 149 IGSILAKWAPPN---ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred hhceeeeECCHH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999998888887 8999999999999888776654
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.70 E-value=9.7e-16 Score=122.44 Aligned_cols=142 Identities=13% Similarity=0.176 Sum_probs=120.7
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRL 141 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (219)
....+.+|.+. |.++.+.++..+.+.++..+++++.|+++||+|||+++.++.++..++.+.. ..++.+.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 34456777666 8999999999999999999999999999999999999999988888877776 6788889999999
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHH
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------WYTTVAYIGAFVSFLS 211 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~ 211 (219)
+.|++.+...+..+.++.|.+| + +|+++++..+....+|..+++.+...+ +||+.|.+.++..++.
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-Q---RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-c---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 9999998888888888888886 6 699999999999999998888877665 3898887766554433
No 74
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.70 E-value=1.4e-16 Score=129.91 Aligned_cols=137 Identities=17% Similarity=0.219 Sum_probs=118.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-----KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~ 150 (219)
+.++.+.+++.+...++..+++++.|+++||+|||+++..+.++.+++.+.... .++++.+.+.|++.|++.+..
T Consensus 48 ~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 48 TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999888777766655432 467888889999999998888
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.+...+++.|..|++ +|+++.++.+....+|..++|.+++.+ +|++.+++.++..++..+..
T Consensus 128 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 128 VTALLAATPALVGRE---NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHhhhhhhccCHH---HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 888889999999999 999999999999999999999998876 79999888776666554443
No 75
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.70 E-value=1.1e-15 Score=124.27 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=107.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---h-hhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---T-KSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.++..+.+.++..+++++.|++.||+||||++..+..+..++.+++. . .++++.+++.|++.|++.+...
T Consensus 44 g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~ 123 (402)
T TIGR00897 44 GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFA 123 (402)
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHH
Confidence 99999999999999999999999999999999999999999998888776543 3 3578888899999999988777
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHH-HHHHHHhhhh----hhHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGI-LLSYLTGAFF----WYTTVAYI 203 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~----~w~~~~~~ 203 (219)
+....++.+.+|++ +|++++|+.+...++|. .++|.+++.+ +|+..++.
T Consensus 124 ~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 124 YSFLVWVVYNTKQD---NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred hHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 77788889999999 99999999999999996 5788887665 65544443
No 76
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=2.5e-16 Score=108.67 Aligned_cols=128 Identities=23% Similarity=0.288 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCC
Q psy13786 87 SISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHN 166 (219)
Q Consensus 87 ~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 166 (219)
+...++..+++++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+....++.|.+|++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 83 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE- 83 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh-
Confidence 4456788899999999999999999999999998888888888889999999999999999988999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 167 TDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 167 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+|++..++.+....+|..++|.+.+.+ +|++.+++.+...++..+..++
T Consensus 84 --~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 84 --ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred --hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998877 7999998888777766655543
No 77
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.68 E-value=3.2e-15 Score=124.61 Aligned_cols=136 Identities=14% Similarity=0.152 Sum_probs=112.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATKS-DLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|+++.+.++..+.+........+++|+++|| +|||+.+.++.++..++..++++++ +.+.+.+.+++.|++.|...+.
T Consensus 53 g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~ 132 (500)
T PRK09584 53 GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKAN 132 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCC
Confidence 8899888888887776666666789999999 5999999999999999988888864 4566778899999999988888
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 212 (219)
..+++.|++|+++. +|..+.++++.+.++|..++|.+++++ |||+.|++.++..++..
T Consensus 133 ~~~l~~~~f~~~~~-~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 133 PSSLLSTCYEKDDP-RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHhcCCCch-hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 88999999986510 345678888999999999999999888 89999998776545444
No 78
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.68 E-value=3.1e-15 Score=123.22 Aligned_cols=138 Identities=16% Similarity=0.128 Sum_probs=111.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh-CCchhhhHhhHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY-GRKSALMITNVPSLCGWLLMATKS-DLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++.+..+ +...+.+...+..++.|...+.
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~ 120 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSN 120 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccccccc
Confidence 89999999999999999999999999999999 999999999999998887766533 2233444444555666767777
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
..++++|.+|+++. +|.++.++.+...++|+.++|.+.+++ ||++.|.+.++..++.++.
T Consensus 121 ~~alv~elfp~~~~-~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 121 VSCLLGELYEPTDP-RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHCCCCCc-cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 78999999987410 588899999999999999999999988 8999998876654444433
No 79
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.67 E-value=1.4e-15 Score=119.92 Aligned_cols=170 Identities=18% Similarity=0.106 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHhhhhhhccccccccchhhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH
Q psy13786 44 FRLIYLGLIVILPGVAPGMSFGFPAVALPQMSYLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG 123 (219)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~ 123 (219)
++............++..+......+.++...|+|+.|.+++.++..+...+..++.|.+.||+|.|++...+.++..+-
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 33444444444444444333444444444222999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh---hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h
Q psy13786 124 WLLMATKS---DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W 196 (219)
Q Consensus 124 ~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~ 196 (219)
++..+++. +++.+++.+++.|++. +.++...+++++++|++ ++|.++|++. ..++|..+...++..+ +
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~---~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKE---KQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChh---hhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 99988864 4559999999999984 56788899999999999 9999999998 6777766665555554 6
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHhh
Q psy13786 197 ---YTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 197 ---w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
|+.+..+..+..++..+..++.
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~ 192 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLG 192 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888887777777766653
No 80
>KOG2615|consensus
Probab=99.66 E-value=7.2e-16 Score=119.83 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=106.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 77 LTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
.+..-.|.+.+.+.+.+.+.++.+|.++||+|||+++..+.+..++...+.+.+.|+..+++.|++.|+..|- ..+.-+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHH
Confidence 3455678999999999999999999999999999999999999999999999999997777889999999874 467789
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+++|+++++ +|+.+++..+..+++|.++||.+++++
T Consensus 144 iisdV~sek---~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 144 IISDVVSEK---YRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHHhhcChh---hccceeeeeehhhhcchhhcchhhhHH
Confidence 999999999 999999999999999999999999988
No 81
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.65 E-value=1.9e-14 Score=116.67 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=112.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++.+++.+...+..+
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGM 327 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999888888888888999999999999999988877666555555555567777777888888887777767777
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.+..|..|+ +|+++.++++....+|..++|.+++.+ +|+..+++.+++.++.++..++
T Consensus 328 ~~~~~~~p~----~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 328 LYFQDLMPG----QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHhCCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 888898874 589999998888899999999998887 8999988888777777666554
No 82
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.64 E-value=4.1e-15 Score=119.00 Aligned_cols=134 Identities=16% Similarity=0.042 Sum_probs=114.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhH--HHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDL--INLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~~~~~~~ 153 (219)
+.++.+.+...+...++..+++++.|++.||+|||+.+.++.+...++.++..+.++. ..+....++.|++.+...+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhc
Confidence 7888888999999999999999999999999999999999888888887777665532 23445677888888888888
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 212 (219)
.+.++.|.+|++ +|++..++.+....+|..++|.+.+.+ ||++.|.+.+++.+++.
T Consensus 316 ~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 316 FPSLVSDIFGPA---NSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred cHHHHHHHhhhh---hhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 888999999999 999999999999999999999998877 89999988877766543
No 83
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.63 E-value=8.8e-15 Score=125.86 Aligned_cols=133 Identities=14% Similarity=0.048 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhc
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAEC 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 161 (219)
......+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.+...+...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677899999999999999999999999999999999999888888877788888888988888889999999999
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 162 ITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+|++ .|++++|+.+....+|.+++|.+++.+ +...+|++.+++.++..++.++
T Consensus 677 ~Pt~---~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 677 YPSD---KRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALK 732 (742)
T ss_pred cCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999 999999999999999999999998866 4456777777776666555443
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.63 E-value=5.9e-15 Score=118.79 Aligned_cols=134 Identities=25% Similarity=0.346 Sum_probs=109.1
Q ss_pred CChhhHHHHHHH-----HHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHH--------HHHHHHHHH
Q psy13786 77 LTIDQASWFASI-----SAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLI--------NLYISRLLS 143 (219)
Q Consensus 77 ~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ 143 (219)
.++.+.+...+. ..++..+++++.|+++||+|||+++..+.++..++.+++++++++. .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 334555544433 3344457899999999999999999999999999999999888765 477889999
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh------------hhHHHHHHHHHHHHHH
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------------WYTTVAYIGAFVSFLS 211 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------~w~~~~~~~~~~~~~~ 211 (219)
|++.+...+....++.|.+|++ +|++..+..+.+..+|..+++.++..+ +||+.+++.+++.++.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPG---KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIG 183 (394)
T ss_pred HhhccccccccHHHhhhcCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999888765432 7999998877665554
Q ss_pred HH
Q psy13786 212 LV 213 (219)
Q Consensus 212 ~~ 213 (219)
..
T Consensus 184 ~~ 185 (394)
T TIGR00883 184 LY 185 (394)
T ss_pred HH
Confidence 43
No 85
>PRK12382 putative transporter; Provisional
Probab=99.62 E-value=4.3e-14 Score=114.42 Aligned_cols=134 Identities=15% Similarity=0.149 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhh
Q psy13786 81 QASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAE 160 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 160 (219)
+.+...+...++..++++..|++.||+||||.+..+..+..++.++..+.++.+...+..++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 329 (392)
T PRK12382 250 MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVK 329 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35566677788889999999999999999999999988888888887778888888888999999988888888888999
Q ss_pred ccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 161 CITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.+|++ +|++..++++....+|..++|.+.+.+ ||++.|.+.++..++..+..++
T Consensus 330 ~~~~~---~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 330 RVPSQ---VRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999 999999999999999999999998877 8999999988888777766554
No 86
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.62 E-value=1.7e-14 Score=115.90 Aligned_cols=139 Identities=13% Similarity=0.077 Sum_probs=102.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhH-hhHHH-------HHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMI-TNVPS-------LCGWLLMATKSDLINLYISRLLSGLSV 147 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~G~~~ 147 (219)
|.++.+.+++.+...++..++.++.|++.||+|||+.... ..... .+........++.........+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (399)
T TIGR00893 247 GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL 326 (399)
T ss_pred cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch
Confidence 7888899999999999999999999999999999962111 11111 111111111223444444444444444
Q ss_pred hcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h-hHHHHHHHHHHHHHHHHHHHhh
Q psy13786 148 GLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W-YTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
+ ..+....++.|.+|++ +|++..++.+....+|..++|.+.+.+ + |++.+++.++..++..+..+++
T Consensus 327 ~-~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T TIGR00893 327 G-AGAIGWALISDNAPGN---IAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLLL 398 (399)
T ss_pred h-hhhHHHHHHHhhcChh---HHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHHh
Confidence 4 7788899999999999 999999999999999999999999887 5 9999998888887777666543
No 87
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.61 E-value=7.3e-14 Score=112.12 Aligned_cols=137 Identities=17% Similarity=0.251 Sum_probs=114.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.++..+.......++.++.|++.||+|||+.+.++.+...+........++.+.+.+.+++.|++.+...+...
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999888877777888889999999999999998888776666665556667788788888999998888888888
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.+..|..|++ |++++++++....+|..++|.+.+.+ +|+..+++.++..++..++..
T Consensus 311 ~~~~~~~~~~----~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 311 LYFQDLMPGR----AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHhCcch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 8899988765 67999999999999999999998877 889999988888777766554
No 88
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.61 E-value=3.3e-14 Score=112.60 Aligned_cols=139 Identities=27% Similarity=0.321 Sum_probs=128.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCch-hhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKS-ALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+...+..++.|++.+...+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhH
Confidence 678899999999999999999999999999999999 9999999999999998888888888999999999999999999
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
..++.|..|++ +|++.+++.+....+|..++|.+.+.+ +|+..+++.+++.++..+..++
T Consensus 287 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 287 LTLASELAPPE---ARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHhhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999 999999999999999999999999877 8999999998888887766543
No 89
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.60 E-value=2.4e-14 Score=116.33 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=115.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+...+...++..+++++.|++.||+|||+.+..+.+...++.+.....++.+.+.+..++.|++.+...+...
T Consensus 251 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 330 (406)
T PRK11551 251 GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY 330 (406)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH
Confidence 88899999999999999999999999999999999998887777777766666677777777778888888877888889
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~ 215 (219)
++..|.+|++ +|++..++.+....+|..++|.+.+.+ +|...++......++..++.
T Consensus 331 ~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 331 ALAPLFYPTQ---VRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHHHcchh---hhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999999887 45555555555554444443
No 90
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.60 E-value=5.2e-14 Score=117.17 Aligned_cols=153 Identities=15% Similarity=0.235 Sum_probs=119.5
Q ss_pred hhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh-----CCchh-hhHhhHHHHHHHHHHH
Q psy13786 58 VAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKY-----GRKSA-LMITNVPSLCGWLLMA 128 (219)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~~-~~~~~~~~~~~~~~~~ 128 (219)
+..+.........+|.+. |.+..+.+.. +...... ++++++|+++||+ ||||. +..+.+..+++....+
T Consensus 22 ~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a 99 (491)
T PRK11010 22 FASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMG 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 344444445555666655 8888888886 3333333 6889999999999 99986 5577777777777666
Q ss_pred hh---hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHH
Q psy13786 129 TK---SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTV 200 (219)
Q Consensus 129 ~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~ 200 (219)
+. ++++.+.+.+++.+++.+...+...++..|++|++ +|+++.++...++.+|..+++.+...+ |||..
T Consensus 100 ~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~---~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~ 176 (491)
T PRK11010 100 FLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE---ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGM 176 (491)
T ss_pred HcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHH
Confidence 64 46778888999999999988999999999999999 999999999999999999998777655 79999
Q ss_pred HHHHHHHHHHHHHHH
Q psy13786 201 AYIGAFVSFLSLVLV 215 (219)
Q Consensus 201 ~~~~~~~~~~~~~~~ 215 (219)
|++.++..++..+..
T Consensus 177 f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 177 YWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999887766665443
No 91
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=2.4e-14 Score=116.91 Aligned_cols=137 Identities=18% Similarity=0.233 Sum_probs=115.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh----hHHHHHHHHHHHhhhhhcchhhh
Q psy13786 79 IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS----DLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
..+.+...+...++.+++.++.|+++||+|||+++.++.++..++..+..... +.+.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678899999999999999999999999999999999998888876666532 24566778999999988888888
Q ss_pred hhhhhhccCCCCccchhhHHHHHH-HHHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWST-IALTSGILLSYLTGAFF----------WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----------~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
..++.|.+|++ +|+++.++.+ ....+|..++|.+++.+ ||+..|.+.+++.++..++.+++
T Consensus 330 ~~~i~~~~p~~---~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~ 401 (418)
T TIGR00889 330 SVFVEKEVPVH---IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIF 401 (418)
T ss_pred HHHHHHHCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 9999999987 67889999999999876 28889988888877777666554
No 92
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.59 E-value=2.6e-14 Score=129.92 Aligned_cols=131 Identities=12% Similarity=0.094 Sum_probs=106.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhH---hhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMI---TNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
...++..+++.+.+.+.++++|+++||+|||+++.. ..+......+.....++++.+++.|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457788889999999999999999999999997643 22222222222333588999999999999999999999999
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
++.+++|++ +|++++++.+++..+|..++|.+++.+ +|++.|...++..++..+
T Consensus 132 ~l~~~~~~~---~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 132 ILPDHLNKD---ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred hhHhhcCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 999999999 999999999999999999999999988 899888554444444433
No 93
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=1.6e-13 Score=111.32 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=102.6
Q ss_pred cCChhhHHHHHHHHHH-HHHHHHhhHhHhhhhhCCchhhh-HhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAI-TMPIGCLLSGPIIDKYGRKSALM-ITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|.++++.|++.+...+ +..++.+..++ +||+||||.++ .+.+...+...+.+++++++.+.+.+.+.|...+...+.
T Consensus 47 ~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 125 (393)
T PRK15011 47 HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQ 125 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 8999999999776655 55556655666 99999998754 555666677777788888988766655555444566777
Q ss_pred hhhhhhhccCCCCccch--hhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLR--GSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
...+..|..+++ .| +...+..+.+..+|..++|++++.+ |||..|+..++..++..+..+
T Consensus 126 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 191 (393)
T PRK15011 126 MFALAREHADKT---GREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVW 191 (393)
T ss_pred HHHHHHHHhhhc---cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 788888877665 55 3455788888999999999999877 999999988877776655544
No 94
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.59 E-value=5.4e-18 Score=139.50 Aligned_cols=132 Identities=32% Similarity=0.438 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS---DLINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
.+.++..+...++..+|+++.|+++||+|||+.+..+.++..++.++.++++ +++.+.++|++.|++.|+..+..+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4578899999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h---hHHHHHHHHHHHHHHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W---YTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~---w~~~~~~~~~~~~~~~~~ 214 (219)
++.|..|++ +|++..++.+.+..+|..++..++... + ||..+.+..+++++..+.
T Consensus 126 ~~~E~~~~~---~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~ 187 (451)
T PF00083_consen 126 YISEIAPPK---HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL 187 (451)
T ss_pred ccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999 999999999999999988887776544 4 999988888777655443
No 95
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=1.6e-14 Score=118.07 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=118.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+.+..+.+.+.++..++..++.++.|++.||+|||+.+..+.++..++.++.++.++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999998888888888888999888899999998887777778
Q ss_pred hhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.++.|.+|++ .|++..+. ++....+|..++|.+.+.+ ||+..|...+++.++..++.+
T Consensus 338 ~~~~~~~~~~---~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 338 KYITLNFDVR---LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHcCcc---ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 8999999999 89887765 6778889999999998887 899999988877666555443
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.58 E-value=8.2e-14 Score=113.25 Aligned_cols=154 Identities=19% Similarity=0.219 Sum_probs=124.3
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh-----CCch-hhhHhhHHHHHHHH
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKY-----GRKS-ALMITNVPSLCGWL 125 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~-~~~~~~~~~~~~~~ 125 (219)
..++.++...+.....+|.+. |++.+++|++...... .+.++++|+++||+ |||| .+.++.+..+++..
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 334556666666677777776 9999999999776665 58899999999999 8876 67777788877777
Q ss_pred HHHhh---hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hh
Q psy13786 126 LMATK---SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WY 197 (219)
Q Consensus 126 ~~~~~---~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w 197 (219)
...+. .+++.+.+..++.++..+...+...+++.|..|++ +|+++.++...+..+|..+++.++..+ +|
T Consensus 84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~---~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE---ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh---hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 76665 35677777777788888888899999999999999 999999999999999999988877665 79
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13786 198 TTVAYIGAFVSFLSLV 213 (219)
Q Consensus 198 ~~~~~~~~~~~~~~~~ 213 (219)
|..|++.++..++..+
T Consensus 161 ~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 161 GNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998877665544
No 97
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.58 E-value=6.5e-14 Score=127.35 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=101.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 79 IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---TKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
....+++.+++.++..++++++|+++||+|||++++++.++..+..++.. ..++++.+++.|++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 44578899999999999999999999999999999988876665554433 357889999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+++.|++|++ +|++++++.+.+..+|..+++.+++.+
T Consensus 126 ~~i~~~~~~~---~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 126 GIIPELVGKE---NLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred hhhHHhcCcc---cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999999999999998877
No 98
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.57 E-value=1e-13 Score=110.85 Aligned_cols=143 Identities=18% Similarity=0.258 Sum_probs=112.9
Q ss_pred cchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh-----CCchhh-hHhhHHHHHHHHHHHhh---hhHHHH
Q psy13786 69 VALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKY-----GRKSAL-MITNVPSLCGWLLMATK---SDLINL 136 (219)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~~~-~~~~~~~~~~~~~~~~~---~~~~~~ 136 (219)
+..|.+. |+|.++.++.... .+...+ ++++|++.||+ ||||.+ +.+.+..++.....++. .+.+.+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 3444444 8999999999655 444444 89999999998 899975 56677777776666665 455566
Q ss_pred HHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h--------hHHHHHHH
Q psy13786 137 YISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W--------YTTVAYIG 204 (219)
Q Consensus 137 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~--------w~~~~~~~ 204 (219)
....++.+.+.+...+...+++.|.+|++ +|+++.++...+..+|..+++.++..+ + ||..|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDE---ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHh---hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 67777888888888899999999999999 999999999999999999999998766 6 99999988
Q ss_pred HHHHHHHHHHHH
Q psy13786 205 AFVSFLSLVLVA 216 (219)
Q Consensus 205 ~~~~~~~~~~~~ 216 (219)
++..++..+..+
T Consensus 164 ai~~l~~~~~~~ 175 (356)
T TIGR00901 164 ALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHH
Confidence 887666554433
No 99
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=2.3e-13 Score=110.37 Aligned_cols=135 Identities=18% Similarity=0.220 Sum_probs=115.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAA 159 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 159 (219)
.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++..+....++.+.+++..++.|++.+...+.......
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 328 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAV 328 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34566677888889999999999999999999999888888888887777888888888899999999888888788888
Q ss_pred hccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 160 ECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 160 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
|..|++ +|+++.++++....+|..+++.+.+.+ ||++.+++.++..++.++..++
T Consensus 329 ~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 329 KRVPPQ---NRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999999999998888887777 8999999888777776655543
No 100
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=2.6e-13 Score=113.09 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=102.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHH---HHhhhhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLL---MATKSDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|.+..+.++..+...++..++.++.|+++||+|||+++..+.+...+..+. ...+++...+++++++.|++.+....
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 361 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTG 361 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 778878888888889999999999999999999999988877644433322 22244567777888888887776667
Q ss_pred hhhhhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
....++.|.+|++ .|++++++ ++.+ .+++.++|.+.+++ +|+.++++..+++++.++..+
T Consensus 362 ~~~~~~~~~~p~~---~Rg~~~g~~~~~~-~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 362 VMASTLPAMFPTH---IRYSALAAAFNIS-VLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHCCCc---cchHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 7788889999999 99999996 5554 45556777777665 467666666666666555444
No 101
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=2.1e-13 Score=107.15 Aligned_cols=156 Identities=19% Similarity=0.083 Sum_probs=135.5
Q ss_pred hhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---hh
Q psy13786 57 GVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---TK 130 (219)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~~ 130 (219)
.+..++......+..|.+. +++..+++.++..++.++.+.+++.|++.+|+|+|+-++.+..++++++.++. ..
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~ 101 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS 101 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3455555666667788877 99999999999999999999999999999999999999999999999999885 56
Q ss_pred hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---------------
Q psy13786 131 SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--------------- 195 (219)
Q Consensus 131 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------- 195 (219)
.++..++...++.|.|.+...+..+++++...+++ ....-+.+.+..+.+|..++|+++..+
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~---~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~ 178 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPE---SAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQIL 178 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch---hHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHH
Confidence 78889999999999999999999999999999998 788889999999999999999998765
Q ss_pred --------hhHHHHHHHHHHHHHHHHHH
Q psy13786 196 --------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 196 --------~w~~~~~~~~~~~~~~~~~~ 215 (219)
.|+++|...+...++..+..
T Consensus 179 ~~~~~~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 179 AIKGADASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 36677777776666555544
No 102
>PRK09952 shikimate transporter; Provisional
Probab=99.55 E-value=1.8e-13 Score=112.42 Aligned_cols=138 Identities=12% Similarity=0.009 Sum_probs=102.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh---h-hhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT---K-SDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.....+.....+...++.++.|+++||+|||+.+..+.++..++.+.... . ++...+++..++.+++.+...
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVV 361 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 777766655666667777888999999999999999988887666554433322 2 234444455667778877778
Q ss_pred hhhhhhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+..++++.|.+|++ .|+++.++ ++.+..+|+.++|.+.+.+ +|+..+.+.++..++..+..+
T Consensus 362 ~~~~~~~~e~~p~~---~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 362 CVQQPMFTEMFGAS---YRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHCCcc---hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 88899999999999 99999997 5555668888999888876 477888877777776665543
No 103
>KOG2504|consensus
Probab=99.55 E-value=6.8e-14 Score=116.05 Aligned_cols=135 Identities=18% Similarity=0.248 Sum_probs=122.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHH-HHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYIS-RLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~~~~~~~~~~ 154 (219)
+.+..+++|+.++......+.+|+.+.+.||+|.|++.+.|.++..++.++..++++.+.+++. -++.|+|.+..+...
T Consensus 77 ~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pa 156 (509)
T KOG2504|consen 77 GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPA 156 (509)
T ss_pred CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcch
Confidence 7788889999999999999999999999999999999999999999999999999999888775 699999999999999
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
...+..+|+++ |+.++|+...+.++|.++-|.+...+ |||+.+++.+.+.+-.++.
T Consensus 157 iviv~~YF~kk----R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~ 216 (509)
T KOG2504|consen 157 VVILGTYFEKK----RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVA 216 (509)
T ss_pred hhhhhhHhHHH----HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 99999888775 99999999999999999988888877 9999999888777554443
No 104
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.54 E-value=1.6e-13 Score=111.29 Aligned_cols=136 Identities=15% Similarity=0.062 Sum_probs=103.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---hh-----hhHHHHHHHHHHHhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---TK-----SDLINLYISRLLSGLSV 147 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~l~G~~~ 147 (219)
|.++.+.+++.+...++..+++++.|+++||+|||+.+..+.....+...... .. +....+.+.+++.|++.
T Consensus 34 g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 113 (396)
T TIGR00882 34 GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVF 113 (396)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999887666554433221 11 12334556688888888
Q ss_pred hcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHH
Q psy13786 148 GLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+...+....+..|..+ +++...+......++|..++|.+++.+ +|++.|+..+++.++..++.+
T Consensus 114 ~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 114 SAGAGAIEAYIEKVSR-----NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred ccchhhHHHHHHHhhh-----hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHH
Confidence 8777877777766532 344566667777788888898888876 999999988877776655443
No 105
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=4.6e-13 Score=108.20 Aligned_cols=135 Identities=12% Similarity=0.157 Sum_probs=119.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+.+.+...++.+++.+..+++.||+|+|+.+.++.+...+.....++.++.+.+++.+.+.|+..+...+...
T Consensus 236 g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 236 GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHH-HHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWST-IALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.++.+. |++ +|+++.++++ ...++|..++|.+++.+ ++ ..|...+.++++.+++.
T Consensus 316 ~~i~~~-~~~---~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 316 RYIAAQ-PGS---EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHhC-CHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 999998 888 8999999876 57789999999999988 54 45666666666655443
No 106
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.54 E-value=1.3e-13 Score=111.66 Aligned_cols=125 Identities=16% Similarity=0.072 Sum_probs=102.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHH-HHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWL-LMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.++.+.+++.+...++..++.++.|++.||+|||+.+..+.+...+..+ .....++.+.+.+..++.|+..+...+..
T Consensus 270 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (405)
T TIGR00891 270 GLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGIL 349 (405)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhH
Confidence 88999999999999999999999999999999999998887766533332 23334566666666677777777777888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h-hHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W-YTTVAYI 203 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~ 203 (219)
+.++.|.+|++ +|++++|+.+....+|..++|++.+.+ | |+..+..
T Consensus 350 ~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 350 PKHLGEYFPTD---QRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHhhhCCcc---hhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 89999999999 999999999999999999999999988 4 5554443
No 107
>PRK03699 putative transporter; Provisional
Probab=99.53 E-value=6.9e-13 Score=107.57 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=111.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|+++.+.+.+.+.+.++..++.+..|+++||++||+.+.....+..+...+....++...+.+..++.|++.+..++...
T Consensus 237 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 237 GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999998887777777666666667776666777888888877778877
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
.+..|..|.+ +++..+....+..+|..++|.+.+.+ ||+..++..+++.++..+.
T Consensus 317 ~~~~~~~~~~----~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 317 TLGSQQTKVA----SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHccCC----CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 7888877644 67778888888899999999999887 8888888777776666443
No 108
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=1.1e-13 Score=112.34 Aligned_cols=133 Identities=17% Similarity=0.159 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhc
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAEC 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 161 (219)
.+.+.+...++..++.+..|++.||+|||+.+..+.....++.+...+.++.+.+.+.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45566677788889999999999999999999998888887777777778888888899999999999889988999999
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 162 ITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.|++ +||+..++++....+|..++|.+++.+ +|++.|++.+++.++..+..++
T Consensus 340 ~~~~---~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQ---IAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcc---cceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999877 8999999988888777665543
No 109
>KOG0253|consensus
Probab=99.51 E-value=2.4e-13 Score=105.70 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
.+.++...+...+......+.....+.+.|... |.+..+..++....+.+..+++..+|.++|++|||+.+.+....
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 344555555555555554444444444445444 88888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----
Q psy13786 120 SLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---- 195 (219)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---- 195 (219)
..+..++.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|.. +|..-+-+. ..+.+|......++...
T Consensus 153 t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~---~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 153 TGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSS---HRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCc---CCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998 788889999999999 999888877 88899999888887766
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~ 214 (219)
||||.......+..+.+.+
T Consensus 228 gwr~~l~~~~~pl~~~a~f 246 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARF 246 (528)
T ss_pred hHHHHHHHHHhHHHHHHHH
Confidence 9999887777555444443
No 110
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.51 E-value=9e-13 Score=109.23 Aligned_cols=138 Identities=14% Similarity=0.013 Sum_probs=103.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLL--MATKSDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|++..+.++..+...++..++.+..|+++||+|||+.+........++... ....++.....+.+++.|+........
T Consensus 290 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 369 (467)
T PRK09556 290 GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLL 369 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHH
Confidence 899999999999999999999999999999999998876654444333222 223456666667788888654443333
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHH-HHHHHHHHhhhh-h---------------hHHHHHHHHHHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTS-GILLSYLTGAFF-W---------------YTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~-~---------------w~~~~~~~~~~~~~~~~~~~ 216 (219)
......|.+|++ .||++.|+.+....+ |..++|.+.+.+ + |+..|++..+..+++++..+
T Consensus 370 ~~~~~~~~~p~~---~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 370 IGVAAVGFVPKK---AIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHhhcchh---hHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 446777999999 999999999888886 667777776655 4 89999888777776655543
No 111
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.51 E-value=1.4e-13 Score=110.70 Aligned_cols=131 Identities=21% Similarity=0.172 Sum_probs=102.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHH-H-HHHh--hhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGW-L-LMAT--KSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.+...+...++..++.++.|+++||+|||+.+.....+..+.. . .... .++.+.+....++.|++.+...
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYT 330 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHh
Confidence 7888899999999999999999999999999999998775554443322 1 2222 2456666677888898888888
Q ss_pred hhhhhhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh----h-hHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF----W-YTTVAYIGAFVSF 209 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~ 209 (219)
+...+++.|.+|++ +|+++.++ ++....+|..++|.+++.+ + |+..++...+..+
T Consensus 331 ~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 331 GPMGSFLPELFPTE---VRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hhHHHHHHHhCCcc---ceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99999999999999 99999996 5677778888999998877 4 7777666655443
No 112
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.51 E-value=4.6e-13 Score=108.15 Aligned_cols=144 Identities=12% Similarity=-0.049 Sum_probs=110.6
Q ss_pred hhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhh-HHHHHHH-HHHHhhhhH
Q psy13786 59 APGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITN-VPSLCGW-LLMATKSDL 133 (219)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~-~~~~~~~-~~~~~~~~~ 133 (219)
..........|++|.+. |.+..+.+++.+.+.+...++++++|+++||+|||+...... +...+.. .....++++
T Consensus 15 ~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 94 (382)
T TIGR00902 15 GYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNA 94 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 33334455566677666 999999999999999999999999999999999854332211 1111122 233457889
Q ss_pred HHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 134 INLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 134 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
+.+++.|.+.|.+.+...+...++..+. ++ +|++..+......++|..++|++++.+ |||..|++..+.
T Consensus 95 ~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~---~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 95 WLLFIAIGLFALFFSAGMPIGDALANTW--QK---QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHccchhHHHHHHHHH--HH---HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 9999999999998888888888887654 45 789999999999999999999988877 899988876554
No 113
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.50 E-value=5e-13 Score=107.97 Aligned_cols=141 Identities=9% Similarity=-0.034 Sum_probs=106.9
Q ss_pred ccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc----hhhhHhhHHHHHHHHHHHhhhhHHHH
Q psy13786 64 FGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK----SALMITNVPSLCGWLLMATKSDLINL 136 (219)
Q Consensus 64 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr----~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (219)
.+...|.+|.+. |.|..+.|+..+.+.++..+++++.|++.||+||| +.+.+.... .........++++.+
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 97 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAHSFWLL 97 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcccHHHH
Confidence 344455555555 89999999999999999999999999999999994 333222211 122223346889999
Q ss_pred HHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHH
Q psy13786 137 YISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLS 211 (219)
Q Consensus 137 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~ 211 (219)
++.|++.|++.+...+...++..++ ++ +|++..+.......+|..++|.+++.+ +||..|+..++..++.
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~--~~---~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTW--QK---QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASM 171 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHH--Hh---hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 9999999999888888877777765 34 577888888888889999999999877 9999988777554443
No 114
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=2.5e-12 Score=104.08 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=111.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGW-LLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.++.+.+++.+...++..+++++.|+++||+|||+... +..+..++. .+....++.+.+.+..++.|++.+...+..
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 315 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAM 315 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHH
Confidence 788899999999999999999999999999999887544 444333333 333456677777888889999887777777
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
...+.|..| + +|++++++++....+|..+||.+++.+ +++..++..+.+.+++++..++
T Consensus 316 ~~~~~~~~~-~---~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 316 QVKVLKLAP-D---ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHhCC-C---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 888888766 5 689999999999999999999999887 8999999998888887776654
No 115
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=1.7e-12 Score=104.88 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=109.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.++..+...++..++++..|++.||+|||+++..+.....++..... . ........++.|++.....|...
T Consensus 231 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 231 GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHH
Confidence 88888999999999999999999999999999999999888777776655443 2 22334456777877777788888
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.++.|..|++ +++...+..+....+|..++|.+++.+ +|++.|.+.+.+.++..+..+
T Consensus 308 ~~~~~~~~~~---~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 308 AWACEKVEHH---ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHccCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 8899999988 788888888889999999999999988 788888888777766655443
No 116
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=1.4e-12 Score=106.07 Aligned_cols=138 Identities=14% Similarity=0.026 Sum_probs=106.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhh-HhhHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALM-ITNVPSLCGWLLMAT-----KSDLINLYISRLLSGLSVGL 149 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~ 149 (219)
|.++.+.+++.+...++..++.+..|+++||+|||+.+. .+.+...+..+.... .++.+...+..++.|++.+.
T Consensus 253 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 332 (402)
T TIGR00897 253 GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG 332 (402)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999988764 333333333333222 24566666778888888776
Q ss_pred chhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 150 ATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
..+ ....+.|. +++ +|+++.|+.+....+|..++|.+.+.+ ||+..+++.+++.++..++.+|.
T Consensus 333 ~~~-~~~~~~~~-~~~---~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 333 YVP-LAAVFPTL-APK---HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHH-HHHHHHhh-Ccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 544 34556665 556 799999999999999999999999877 88899999888888877766653
No 117
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.49 E-value=1.5e-12 Score=107.04 Aligned_cols=138 Identities=13% Similarity=0.163 Sum_probs=107.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhh----hhCCchhhhHh-hHHHHHHHHHHHhhhhHH----------------
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIID----KYGRKSALMIT-NVPSLCGWLLMATKSDLI---------------- 134 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grr~~~~~~-~~~~~~~~~~~~~~~~~~---------------- 134 (219)
|.++...+++..+..+...+.+++.|+++| |+||||+++.+ .+...++..+.+++++..
T Consensus 35 g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i 114 (477)
T TIGR01301 35 GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAI 114 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHH
Confidence 999999999999999999999999999999 59999998875 566666666666655532
Q ss_pred -HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccch--hhHHHHHHHHHHHHHHHHHHHhhhh----------------
Q psy13786 135 -NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLR--GSLSTWSTIALTSGILLSYLTGAFF---------------- 195 (219)
Q Consensus 135 -~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~~---------------- 195 (219)
..+++..+..++.....+...+++.|.+|++ +| +.+.++.+...++|+.+++.+++..
T Consensus 115 ~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~---~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~ 191 (477)
T TIGR01301 115 IVFVVGFWILDVANNMLQGPCRAFLADLTGGD---ARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV 191 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence 2233334445577777788899999999988 66 5788899999999999999887653
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 ---WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 ---~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+.|..|++.++..++..+...
T Consensus 192 ~~~~~~~~F~i~a~~l~i~~l~t~ 215 (477)
T TIGR01301 192 SCANLKSCFLIDIILLAILTYIAL 215 (477)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHe
Confidence 456778887776666655544
No 118
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=3.5e-13 Score=108.66 Aligned_cols=116 Identities=13% Similarity=0.137 Sum_probs=96.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+...+...++..++.++.|++.||+|||+......+.......+....++.+...+..++.|++.+...+...
T Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 360 (398)
T TIGR00895 281 GFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLY 360 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999554444333333333333356677777888999999998999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAF 194 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 194 (219)
+++.|.+|++ +|+++.++.+....+|..++|.+.+.
T Consensus 361 ~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 361 ALMALFYPTA---IRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHhhcCCHH---HHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999 99999999999999999999998875
No 119
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.48 E-value=2.6e-12 Score=104.89 Aligned_cols=137 Identities=12% Similarity=0.039 Sum_probs=116.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++..++.++..+.++.+...+..++.|++.+...+...
T Consensus 255 g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (417)
T PRK10489 255 QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQY 334 (417)
T ss_pred CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999998888888888888888887777788887777888889998887777778
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
+++.|..|++ .||+++++++....+|..++|.+.+.+ |++..++..++..++..++.
T Consensus 335 ~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 335 TLLQTQTPDE---MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHhhCCHH---HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 8999999999 999999999999999999999999888 66667766665555544433
No 120
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.48 E-value=1.7e-12 Score=106.97 Aligned_cols=139 Identities=13% Similarity=0.038 Sum_probs=107.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-----hh------hHHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-----KS------DLINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~l~G 144 (219)
|.+..+.++......++..++.++.|+++||+|||+.+.++.++..++.++..+ .+ +...+....++.+
T Consensus 315 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 315 GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 888888888999999999999999999999999999999888877777666652 11 2222333333333
Q ss_pred hhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 145 LSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.......+....++.|.+|++ +|++++++.+....+|..++|.+.+.+ +|++.|++.++++++..+..++
T Consensus 395 ~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 395 FFAMGWGPVPWVIVSEIFPLS---LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred HHHccccCeehhhhhccCChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHhe
Confidence 333334466677889999999 999999999999999999999888876 7888888888777777665543
No 121
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.47 E-value=1.8e-12 Score=105.99 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=92.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---hhh-----hHHHHHHHHHHHhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---TKS-----DLINLYISRLLSGLSV 147 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~l~G~~~ 147 (219)
|+++.+.|.+.+...++..+++++.|+++||+|||+++.++..+..+...... ..+ ......+.+++.|.+.
T Consensus 42 g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (420)
T PRK09528 42 GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGF 121 (420)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 89999999999999999999999999999999999999876655544432211 111 1111222333344333
Q ss_pred hcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHH
Q psy13786 148 GLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~ 216 (219)
....+....+..+ . .+ +|++..+..+....+|..++|.+++.+ +|++.|+..++.+++..++.+
T Consensus 122 ~~~~~~~~~~~~~-~-~~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 122 LAGAGAIEAYIER-V-SR---RSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLF 188 (420)
T ss_pred ccchhhhhhHHHH-H-Hh---hccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHh
Confidence 3333333333322 2 23 467788888888899999999998877 899999888877766655543
No 122
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.46 E-value=2e-12 Score=104.92 Aligned_cols=139 Identities=10% Similarity=0.121 Sum_probs=115.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+.+....+...+...+...++.+..|++.||+|||+.+.++.++.++...+....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888888899999999999999999999999999888888887777788888888889999988776666666
Q ss_pred hhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 156 VYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.+..+..+++ .+++..+. ++....+|..+++.+++.+ ||+..|.+.+++.++..+...+
T Consensus 330 ~~~~~~~~~~---~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVR---LSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcc---eEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888 88887776 6788899999999888888 8899999988887777665443
No 123
>KOG2325|consensus
Probab=99.45 E-value=9.2e-12 Score=101.30 Aligned_cols=172 Identities=23% Similarity=0.287 Sum_probs=128.8
Q ss_pred CCCchHHHHHHHHHHHHhhhhhhccccccc----cchhhcc-cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCC-chh
Q psy13786 39 DTPTLFRLIYLGLIVILPGVAPGMSFGFPA----VALPQMS-YLTIDQASWFASISAITMPIGCLLSGPIIDKYGR-KSA 112 (219)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~ 112 (219)
+++..||..++..+.++... ...+++. +++..+. +-+.+..|++.++..++..++++++|+.+.|.+. |++
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~---v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P 104 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVA---VQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP 104 (488)
T ss_pred ccCCchHhHHHHHHHHHHHh---hhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC
Confidence 34556666666665554443 3333333 2222222 6667788999999999999999999999999886 888
Q ss_pred hhHhhHHHHHHHHHH-Hh---hh-hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH
Q psy13786 113 LMITNVPSLCGWLLM-AT---KS-DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL 187 (219)
Q Consensus 113 ~~~~~~~~~~~~~~~-~~---~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 187 (219)
++.+.++..+++++. +. .+ ..+.++++|++.|+|.| .....-.|+++....+ +|.++++..+.+..+|..+
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~---dR~rA~a~~~~~~vlg~il 180 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVE---DRPRAFAATSGGFVLGIIL 180 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCcc---chHHHHHHhhhHHHHHHHH
Confidence 899999999999887 33 23 56788899999999976 4577889999988888 8999999999888899999
Q ss_pred HHHHhhhh-----------------hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 188 SYLTGAFF-----------------WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 188 ~~~~~~~~-----------------~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
||.+...+ .+..+-|+.++..++.++..++
T Consensus 181 Gp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 181 GPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred hHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 98887766 2334566667776666665544
No 124
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=4.4e-12 Score=104.16 Aligned_cols=139 Identities=18% Similarity=0.080 Sum_probs=96.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh--CCchhh-hHhhHHHHHHHHHHH--hhhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY--GRKSAL-MITNVPSLCGWLLMA--TKSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|++..+.+...+.+.++..++.++.|+++||+ ++|+.. ....+...+...... ...+.....+..+..|++....
T Consensus 275 g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 354 (434)
T PRK11663 275 GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGP 354 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhH
Confidence 88999999999999999999999999999998 333332 221111111111111 1223333334444455443323
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
......++.|.+|++ +|++++|+.+....+|..++|.+.+.+ ||+..|+..+++.++..+..++
T Consensus 355 ~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 355 QMLIGMAAAECSHKE---AAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHhcccHh---hHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 334456778999999 999999999999999999999888887 8999999888887777665543
No 125
>TIGR00898 2A0119 cation transport protein.
Probab=99.45 E-value=2.3e-12 Score=107.74 Aligned_cols=130 Identities=15% Similarity=0.074 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhH--HHHHHHHHHHhhhhhcchhhhhhhhhhcc
Q psy13786 85 FASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDL--INLYISRLLSGLSVGLATTPAAVYAAECI 162 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 162 (219)
......+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.+..++..+.+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3344566777888999999999999999999998888888777765443 44445556667777777788899999999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 163 TIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 163 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
|++ .|++++|+.+....+|+.++|.+.+.. ++..++.+.++..++..++.++
T Consensus 440 p~~---~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 440 PTV---VRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred cHH---HHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 999 999999999999999999999998833 5666777777666666555443
No 126
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.45 E-value=1.2e-12 Score=105.65 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=122.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|++++++.-+.+.+.--.-+...++||++|| +|+|+.+..+.++++++.+..+.. .+...++++..+.++|.|..-+
T Consensus 57 g~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~ 136 (498)
T COG3104 57 GFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKP 136 (498)
T ss_pred CcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccc
Confidence 4888888888888877777888999999999 599999999999999999999987 4788899999999999999999
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
....+++|.+|++|.+ |-.+.++.+++.++|++++|++.+++ +|...|...++-..+.++..+
T Consensus 137 NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 137 NISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred cHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998653 77788899999999999999999988 888888888777666665544
No 127
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=3.1e-12 Score=106.66 Aligned_cols=129 Identities=12% Similarity=0.019 Sum_probs=100.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|.++.+.+++.+...++..++.++.|+++||+|||+++..+.++..+..+..... .+.+.+.+..++.+....+..+.
T Consensus 307 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (496)
T PRK03893 307 GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGL 386 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchh
Confidence 8999999999999999999999999999999999999888776666555443332 33344444445444433344567
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHH
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFV 207 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~ 207 (219)
.+.++.|.+|++ +|++.+++.+....+|..++|.+++.+ +|+..+...+..
T Consensus 387 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 387 LPKLIGGYFDTE---QRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred hHHHHHhhCCHH---HhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 778999999999 999999999999999999999999887 777776554433
No 128
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=3.5e-12 Score=105.41 Aligned_cols=136 Identities=15% Similarity=0.067 Sum_probs=111.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh--CCchhhhH--hhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY--GRKSALMI--TNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.+++.+...++..+++++.|+++||. ++|+...+ +.+..+++.++....++++.+++.+++.|++.+...
T Consensus 272 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 272 GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHH
Confidence 88999999999999999999999999999974 33433333 333334445555667888888889999999999888
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~ 214 (219)
+....++.|.+|++ +|++.+++++....+|+.++|.+++.+ +|++.|++.++..++..+.
T Consensus 352 ~~~~~~~~~~~~~~---~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 352 ALLFEVLMDLVGAQ---RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHhhHH---HHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 99999999999999 999999999999999999999999877 5889998888776665543
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.43 E-value=1.8e-11 Score=99.34 Aligned_cols=135 Identities=16% Similarity=0.098 Sum_probs=105.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS-DLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.+..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +...+ ..++.|++.+...+..
T Consensus 236 g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 236 GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLC 313 (393)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHH
Confidence 88999999999999999999999999999999999999888777777665544322 22222 2345678777777877
Q ss_pred hhhhhhccC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECIT-IHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 155 ~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.....+..+ ++ +|++..++.+....++..++|.+.+++ +|...|++.++.+++..+..
T Consensus 314 ~~~~~~~~~~~~---~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 314 LLLALDHSVQPA---IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHhhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 777777775 56 799999999999999999999999888 47777777766666555443
No 130
>KOG0569|consensus
Probab=99.42 E-value=1.5e-11 Score=100.62 Aligned_cols=171 Identities=17% Similarity=0.078 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhH
Q psy13786 42 TLFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNV 118 (219)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~ 118 (219)
..++...+.+.+.++..+.+.+.. ..+...+. |++..++.+++....+...+..+++.++.||+|||+.++.+..
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai--~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~ 343 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAI--FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLS 343 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCccee--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 344444455555555444443322 22222222 9999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhh---hh-H--H---HHHHHHHHHhhhhh-cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHH
Q psy13786 119 PSLCGWLLMATK---SD-L--I---NLYISRLLSGLSVG-LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLS 188 (219)
Q Consensus 119 ~~~~~~~~~~~~---~~-~--~---~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 188 (219)
+..+..+++... .+ . | ..+++.++..++.+ +..|..+-+.+|.+|++ .|..+.++......+..++.
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~---~R~aa~s~~~~~~w~~~fiv 420 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS---ARSAAQSVATAVNWLSNFIV 420 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc---chHHHHHHHHHHHHHHHHHH
Confidence 888887776642 11 1 1 12233333333222 34688889999999999 99999998888888877776
Q ss_pred HHHhhhh----hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 189 YLTGAFF----WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 189 ~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
......+ |- +.|+...+++++..+..++.
T Consensus 421 ~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 421 GFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHh
Confidence 6555555 32 67777788888877777654
No 131
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.42 E-value=1.5e-11 Score=99.33 Aligned_cols=134 Identities=15% Similarity=0.218 Sum_probs=111.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.+.....++.+.+++..++.|++.+...+...
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88988999999988899999999999999999999999999999888888888889999888999999999988888888
Q ss_pred hhhhhccCCCCccchhhHHHHHH-HHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWST-IALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
.+..+. +++ ++++..+..+ ....+|..++|.+++.+ ++ ..++..+++.++.++.
T Consensus 316 ~~~~~~-~~~---~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 316 RYIAAR-PGS---EVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHC-CHh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 888886 555 6788888765 66677888899998888 55 4556666665555443
No 132
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=7.1e-12 Score=103.46 Aligned_cols=138 Identities=14% Similarity=0.061 Sum_probs=95.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh--CCchhhh-HhhHHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY--GRKSALM-ITNVPSLCGWLLMAT--KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|++..+.++......++..++.++.|+++||+ +||+... ....+..++.+.... ..+.....+..++.|.+....
T Consensus 285 g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 364 (452)
T PRK11273 285 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGP 364 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhH
Confidence 78888899998999999999999999999999 5554332 222222333222222 234444444555555544333
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH-HHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL-SYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
......+..|.+|++ .||++.|+.+....+|+.+ +|.+.+.+ ||+..|++.++.++++++...
T Consensus 365 ~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 365 VMLIGLHALELAPKK---AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHcChh---hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 333445678999999 9999999998888887654 68777766 899999888887777766554
No 133
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.42 E-value=1.5e-11 Score=101.62 Aligned_cols=139 Identities=17% Similarity=0.129 Sum_probs=123.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc--hhhhHhhHHHHHHHHHHHh--------hhhHHHHHHHHHHHhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK--SALMITNVPSLCGWLLMAT--------KSDLINLYISRLLSGL 145 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~G~ 145 (219)
|++..+...+..+..+..++|++++|++.||+|.| +++..+.+.+.+..+.-.+ .++.+.+++.-++.|+
T Consensus 313 g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~ 392 (477)
T PF11700_consen 313 GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGL 392 (477)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8888888777665555444 5778889999999999
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+.|..++..-++.+|+.|++ +.+...|++.......+.+||.+.+.+ +-|+.+....++.++.+++.++
T Consensus 393 ~~G~~qs~sRs~~~~LiP~g---~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 393 FMGGIQSASRSLFSRLIPPG---REAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HhhhHHHHHHHHHHHhCCCc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999 999999999999999999999999888 5788888877777777766543
No 134
>PRK15075 citrate-proton symporter; Provisional
Probab=99.42 E-value=6.2e-12 Score=103.29 Aligned_cols=117 Identities=12% Similarity=0.112 Sum_probs=85.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHH-HH---hhhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLL-MA---TKSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|++..+.++......++..++.++.|+++||+|||+++..+..+..+..+. .. ..++........++.+++.+...
T Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 349 (434)
T PRK15075 270 HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYN 349 (434)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 888888888888899999999999999999999999988765444332211 11 12334344444555666666666
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHH-HHHHHHHHHHHHHHhhhh
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWS-TIALTSGILLSYLTGAFF 195 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~~ 195 (219)
+....++.|.+|++ .|+++.++. +.+..+++.++|.+.+.+
T Consensus 350 ~~~~~~~~e~~p~~---~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 350 GAMVVALTEVMPAE---VRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred hhHHHHHHHHCCCC---ccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 66778899999999 999999975 445555567788887766
No 135
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=2.7e-12 Score=102.35 Aligned_cols=117 Identities=11% Similarity=0.083 Sum_probs=105.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhh-HHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSD-LINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.++.+.+...+...++..++.++.+++.||+|||+.+..+..+.+++.....+.++ .+.+.+..++.|++.+...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 322 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQ 322 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999998887777777777777664 7778888999999999889999
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
..++.|..|++ +|++..++.+....+|..++|.+.+.+
T Consensus 323 ~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 323 GTLLQRRVPAE---LLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999988765
No 136
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.41 E-value=9.5e-12 Score=104.03 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh----hHHHHHHHHHHHhhhhhcchhhhhhhhhhcc
Q psy13786 87 SISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS----DLINLYISRLLSGLSVGLATTPAAVYAAECI 162 (219)
Q Consensus 87 ~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 162 (219)
....++.+++.++.+++.||+|||+.++++..+.+++..+.+... +...+...-+...++..+..+..+.+..|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 334556677888999999999999999888877777665555422 1111111112222222234566778889999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-h-------------hHHHHHHHHHHHHHHHHH
Q psy13786 163 TIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-W-------------YTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 163 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~-------------w~~~~~~~~~~~~~~~~~ 214 (219)
|++ .|+++.++.+....+|++++|.+.+.+ + +...+++.++.+++..+.
T Consensus 422 p~~---~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 422 PTR---YRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred chh---HHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 999 999999999999999999999887766 2 234666666666665544
No 137
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.40 E-value=1.8e-11 Score=100.52 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=89.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH--h--hhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA--T--KSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.+..+.+...+...+...+++++.|+++||+|||+.+.++.++..+...... . .++.......-.+.++..+...
T Consensus 275 g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (432)
T PRK10406 275 GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYT 354 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888888889999999999999999988776554433332221 1 1222222222222223333334
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHH-HHHHHHHHHhhhh---h-hHHHHHHHHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALT-SGILLSYLTGAFF---W-YTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~~---~-w~~~~~~~~~~~~~~~~~~~ 216 (219)
+..+.++.|.+|++ .|+++.|+.+...+ +.+...|.+...+ + |...+++.++..++..+..+
T Consensus 355 ~~~~~~~~e~fp~~---~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 355 SISGILKAEMFPAQ---VRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHCCCC---ccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 55678899999999 99999997665444 3344466666655 3 55566665555555555443
No 138
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.39 E-value=4.1e-12 Score=101.72 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=89.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc-hhhhH-hh-HHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK-SALMI-TN-VPSLCGWLLMAT--KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr-~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.+...+...++..++.++.|++.||+++| +.... .. ....++...... ..+.....+..++.|+.....
T Consensus 248 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 327 (379)
T TIGR00881 248 GFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGP 327 (379)
T ss_pred CCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhh
Confidence 88899999999999999999999999999986433 32221 11 111222222222 234445556667777766666
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTV 200 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~ 200 (219)
.+....+..|.+|++ +|+++.++.+....+|..++|.+.+.+ ||++.
T Consensus 328 ~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 328 QMLIGVIASELAPKK---AAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred hHHHHHHHHHhcCcc---hhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 666678899999999 999999999999999999999988877 66654
No 139
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=1e-11 Score=98.39 Aligned_cols=164 Identities=16% Similarity=0.119 Sum_probs=123.2
Q ss_pred HHHHHHhhhhhhccccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh--CCchhhhHhh-HHHHH
Q psy13786 50 GLIVILPGVAPGMSFGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKY--GRKSALMITN-VPSLC 122 (219)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~~~~~~-~~~~~ 122 (219)
+..+.++.++.....+.+..+.|.+. |+|..++++..+.+=++.+.|.+++||++||+ |||.+..+.+ +...+
T Consensus 254 iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~ 333 (448)
T COG2271 254 IWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITA 333 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 33444445555555555555556555 99999999999999999999999999999985 7777665443 33334
Q ss_pred HHHHHHhhh--hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHH-HHHHHHHHhhhh----
Q psy13786 123 GWLLMATKS--DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTS-GILLSYLTGAFF---- 195 (219)
Q Consensus 123 ~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~---- 195 (219)
+....-.++ |+....++.++.|+..-+..-.......|..|++ .-|++.|+.+.+..+ |...+....+++
T Consensus 334 ~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~---AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 334 SLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK---AAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh---hccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 444444444 5588888899999988888877888899999999 999999999888777 777776666666
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~~~ 216 (219)
||...|++..+.++++.++..
T Consensus 411 gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 411 GWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 899988887777777665543
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=5.5e-11 Score=94.72 Aligned_cols=144 Identities=19% Similarity=0.202 Sum_probs=114.4
Q ss_pred ccchhhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-hhhHHHHHHHHHHHhhh
Q psy13786 68 AVALPQMSYLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-KSDLINLYISRLLSGLS 146 (219)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~ 146 (219)
.|++.+..|++.+..+++...+.++..+|..+.|++.|| +.|+.+.....+..+..+...+ .++.+...+.-++.|+.
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 344433339999999999999999999999999999999 9999988887777777776665 45555666666777777
Q ss_pred hhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 147 VGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
............++.. ++ .+..+.+++....++|..+|..+++.+ |+....+..++..++..++.+
T Consensus 314 ~~~~~~~~~~~~a~~~-p~---~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 314 FSPALQGLQTRLARLA-PD---AADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred hhhhhhHHHHHhcccC-CC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 7666556566666633 45 699999999999999999999999988 888888888888877776654
No 141
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=3.5e-11 Score=99.90 Aligned_cols=139 Identities=16% Similarity=0.070 Sum_probs=101.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--hhH-H-HHHHHHHHHhhhhhc-c
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--SDL-I-NLYISRLLSGLSVGL-A 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~~l~G~~~~~-~ 150 (219)
|.+.....+......+...++.++.++++||+|||++++.+.++.+++.++.... .+. . ....+.++.+.+.+. .
T Consensus 302 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (479)
T PRK10077 302 GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW 381 (479)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccc
Confidence 7777667777777888899999999999999999999999999888887776542 111 1 222233444444433 3
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh------h----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAF------F----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~------~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.+..+.++.|.+|++ +|+++.++.+....+|..+++.+... . +|++.|++.++.+++.+++.++
T Consensus 382 ~~~~~~~~~e~~p~~---~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 382 GPVCWVLLSEIFPNA---IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred cchhHHHhHhhCChh---HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 367789999999999 99999999999888888877544432 1 6777888877776666655543
No 142
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=3.1e-11 Score=97.77 Aligned_cols=136 Identities=12% Similarity=0.103 Sum_probs=102.2
Q ss_pred cCChhhHHHHHHHHH-HHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh------hhhHHHHHHHHHHHhhhhh
Q psy13786 76 YLTIDQASWFASISA-ITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT------KSDLINLYISRLLSGLSVG 148 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~G~~~~ 148 (219)
|+++++.+++..... ....++.++.|++.||+|+|+.+..+.++..+....... .++...+.....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 999999999888776 467778899999999999999988877655333222211 1233333444555566667
Q ss_pred cchhhhhhhhhhccCC-CCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 149 LATTPAAVYAAECITI-HNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
...+.......+..++ + ++++..+..+....+|..++|.+++.+ ||+..|+..+++.++..+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGD---QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHhCccc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 7777777787777766 7 899999999999999999999999987 7888888877776665544
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.35 E-value=2.7e-11 Score=101.14 Aligned_cols=134 Identities=14% Similarity=0.168 Sum_probs=115.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-----KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~ 150 (219)
.-|+...+++.+...+...+.++++|.++||+.|||+++.+-++.++.....++ ..+.+.+++.-++.|++.+..
T Consensus 41 t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~ 120 (524)
T PF05977_consen 41 TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFF 120 (524)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999999999999999999999988777655544433 247788889999999999999
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 212 (219)
.|..++.+.|..|++ +...++++.+...++...+||.+++.+ |-.+.|.+.++..++..
T Consensus 121 ~PA~~A~ip~lV~~~---~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i 183 (524)
T PF05977_consen 121 NPAWQAIIPELVPKE---DLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISI 183 (524)
T ss_pred HHHHHHHHHHhccHh---hHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999987 66677777665544443
No 144
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.35 E-value=4.8e-11 Score=108.82 Aligned_cols=131 Identities=21% Similarity=0.234 Sum_probs=111.7
Q ss_pred cCChh-hHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTID-QASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.+.. +.+++.+...++.++++++.|++.||+++|+.+.++.++.+++.++..+..+.+.+++..++.|++.+...+..
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 343 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPL 343 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 88888 89999999999999999999999999999999998888888888888888888888888999999999888888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSF 209 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~ 209 (219)
.+++.+..|++ .||+++++.++...+|..+++.++..+ ++...+++.+.+.+
T Consensus 344 ~~~~~~~~p~~---~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 344 NALIQFRAPEK---ELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHhhcCCcc---chhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999999 999999999999999988877777655 34444554444433
No 145
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=7.5e-11 Score=98.48 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=120.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++...|++.+...+|.++|++..+++.+|+++++.+..+.+..+++.+..++.++.+...+..++.|++.....+...
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999989999999999998888889
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
+.+.+..|++ .||+.++++++....+..+|..+.+.+ |.+..+.+.++..++..++.
T Consensus 330 t~~Q~~~P~~---~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 330 TLVQLSVPDW---VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHhCCHH---HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999988888888888888777 66777776665554444433
No 146
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.34 E-value=1e-10 Score=91.13 Aligned_cols=165 Identities=13% Similarity=0.166 Sum_probs=137.8
Q ss_pred HHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH
Q psy13786 47 IYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG 123 (219)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~ 123 (219)
++....+.+..+-.-...+...|.++++. |.|.+..|.+.+...+...+.++...++.+|+|.++.+..+.++..++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33333333333444444556678888777 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhH
Q psy13786 124 WLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYT 198 (219)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~ 198 (219)
.++-... +...++.+-.+.|.+.+..+...+..+-+.+|++ -+..++.|.+..++|+.+++.+...+ +||
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~----~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR----VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc----hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9988776 7788889999999999999999999999999987 88999999988888777776665555 799
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy13786 199 TVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~ 216 (219)
....+.+.++++.++..+
T Consensus 166 ~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 166 GALGFWALLALLALLIWL 183 (395)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999988888876543
No 147
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.34 E-value=8.2e-11 Score=98.14 Aligned_cols=139 Identities=12% Similarity=0.131 Sum_probs=105.7
Q ss_pred cCChhhHHHHHH-HHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH---Hhh-hhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFAS-ISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM---ATK-SDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~G~~~~~~ 150 (219)
|+++.+.++... ...++.+++.++.|+++||+|||+.+.++.++.++..+.. ... ++...+.+..++..++.|..
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~ 333 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMG 333 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 999999999874 5568999999999999999999998777665545443322 222 34444444555655555555
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.+...++..+..+++ .+++..++.+....+|..+++.+.+.+ ||+..|.+.++++++..+..++
T Consensus 334 ~~~~~a~~~~l~~~~---~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 334 TAAFVALLMTLCNKS---FSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHcCCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 566788899999999 999999999999999988777777776 8999998888888777665543
No 148
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.34 E-value=1.4e-11 Score=101.08 Aligned_cols=138 Identities=24% Similarity=0.270 Sum_probs=105.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchh-hhHhhHHHHHHHHHHHhhhh------HHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSA-LMITNVPSLCGWLLMATKSD------LINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G 144 (219)
|+++.+.|.+.++..+...+..|+.|+++|| +||||. ++.+.+..+++.+++...++ ...+.+.+++.+
T Consensus 31 g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (437)
T TIGR00792 31 GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLG 110 (437)
T ss_pred CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997 688664 55677777777777665543 345566778888
Q ss_pred hhhhcchhhhhhhhhhccC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECIT-IHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~~ 212 (219)
++.+...+...++..|..+ ++ +|++..++.+....+|..+++.+...+ +|++.+.+.+++.++..
T Consensus 111 ~~~~~~~~~~~al~~~~~~~~~---~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 187 (437)
T TIGR00792 111 LFYSFVNIPYWSLVPAITLDPR---ERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL 187 (437)
T ss_pred HHHHhhcccHhhCcccccCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH
Confidence 8888777777888888874 56 899999988888777766554433211 79998888887776665
Q ss_pred HHHH
Q psy13786 213 VLVA 216 (219)
Q Consensus 213 ~~~~ 216 (219)
+..+
T Consensus 188 ~~~~ 191 (437)
T TIGR00792 188 IICF 191 (437)
T ss_pred HHHH
Confidence 5443
No 149
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=9.1e-11 Score=95.98 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=89.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhh--hhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGL--SVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~--~~~~~~~~ 153 (219)
|.++.+.+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+...+.|. +..+..+.
T Consensus 262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (426)
T PRK12307 262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGL 341 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHH
Confidence 8888889999999999999999999999999999999988877766655544432221112222223333 22333456
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+.++.|.+|++ +|++++|+.+....+|+.++|.+.+.+
T Consensus 342 ~~~~~~~~~p~~---~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 342 VPKFLYDYFPLE---VRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HHHHHHHhCcHH---HHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 678889999999 999999999999999999999998887
No 150
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.32 E-value=7.6e-11 Score=96.73 Aligned_cols=118 Identities=19% Similarity=0.243 Sum_probs=96.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 78 TIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-SDLINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
++.+.+++.+...++.+++.++.++++||+|+|+.+.++.++.+++.+...+. ++.+.+.+..++.|++.+...+..++
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888899999999999999999999999999988888777766654 45566677788899999888888899
Q ss_pred hhhhccCCCC----ccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 157 YAAECITIHN----TDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 157 ~~~~~~~~~~----~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+++|..+.+| .+++|...++.+....+|..+++.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998875221 01679999999999999999999888876
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.32 E-value=9.5e-11 Score=92.10 Aligned_cols=123 Identities=13% Similarity=0.012 Sum_probs=97.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+...+.+..+..+|.++.+++.||+|+||++.++..+..++.++....++.... ..-++.|++.+..+|...
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~ 252 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIF 252 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999888887777777665555544333 355688999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIG 204 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~ 204 (219)
+...+..|++ .+++.++. ....+|+.+.|.+.+.+ +.+..+++.
T Consensus 253 s~a~~~~~~~----~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 253 SLALNALGRH----TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHHHhhhhhh----hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 9888888765 45566665 45668899999877776 666666643
No 152
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.31 E-value=3.1e-11 Score=99.33 Aligned_cols=139 Identities=13% Similarity=0.053 Sum_probs=93.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHH---HHHHHHHh--hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSL---CGWLLMAT--KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.++......++..++.+..|+++||+++++....+..... ++...... ..+.+......++.|++....
T Consensus 283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 362 (438)
T TIGR00712 283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGP 362 (438)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccH
Confidence 7889999999999999999999999999999975443233322221 11111112 123343334445555543332
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHH-HHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSG-ILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.........|.+|++ +|+++.|+.+....+| ..++|.+.+.+ ||...+++..+..++..+..++
T Consensus 363 ~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 363 VMLIGLHALELAPKK---AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred HHHHHHHHHHhcChh---heeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 223335678999999 9999999998877776 46788888776 7888888877776666665544
No 153
>PRK10504 putative transporter; Provisional
Probab=99.31 E-value=1e-10 Score=97.00 Aligned_cols=117 Identities=9% Similarity=0.027 Sum_probs=99.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK---SDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|.++.+.++......++..++.++.|++.||+|||+++..+..+..+...+..+. ++.+.+.+..++.|++.+...+
T Consensus 293 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 372 (471)
T PRK10504 293 GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFS 372 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999988889899999999999999999999998888787776665553 3334444566778888888888
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
....+..+..|++ .|+.+.++.++...+|..+++.+.+.+
T Consensus 373 ~~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 373 SMNTLTLKDLPDN---LASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHcCCHH---hccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999 999999999999999999999998876
No 154
>KOG0253|consensus
Probab=99.30 E-value=1.9e-11 Score=95.40 Aligned_cols=125 Identities=15% Similarity=0.108 Sum_probs=92.9
Q ss_pred HHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCcc
Q psy13786 89 SAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTD 168 (219)
Q Consensus 89 ~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 168 (219)
..+.-..|.++.+++.||+|||+.+..+.++.+++.++...+.+-....+..+..-++..+.+.+.+.|..|++|.+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTa--- 466 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTA--- 466 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchh---
Confidence 34556678899999999999999999999999999888877654433333333344444556677899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHH
Q psy13786 169 LRGSLSTWSTIALTSGILLSYLTGAFF--WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 169 ~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.|+++.|.-.....+|+++.|+++-.. +-..+..+.+.+++++.+...
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999444 333333444445555544443
No 155
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.30 E-value=1.5e-10 Score=93.48 Aligned_cols=134 Identities=17% Similarity=0.212 Sum_probs=97.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-hhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-KSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.++.+.++..+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.+.+.....+..
T Consensus 231 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 310 (382)
T PRK10091 231 GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPL 310 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 889999999999999999999999999999999999999888887777655543 4555555566666666655444433
Q ss_pred hh-hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHH
Q psy13786 155 AV-YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 155 ~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~ 214 (219)
.. ...+..+++ .++.+ ..+....+|..++|.+++.+ +|++.+...+..+++....
T Consensus 311 ~~~~~~~~~~~~---~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 311 QILLLQNAKGGE---LLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHHhCCcch---HHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 43 334444444 45544 34667889999999998876 6888888776665555443
No 156
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.27 E-value=5.4e-11 Score=98.83 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=102.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh----hhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT----KSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.++......++..++.++.|++.||+|||+.+.++..+..++..+..+ ..+.+.+....++.|++.+...
T Consensus 287 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~ 366 (485)
T TIGR00711 287 GYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFF 366 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999998888888777662 2355666777889999998887
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+.......+..|++ +|+++.++.+....+|+.+++.+.+.+
T Consensus 367 ~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 367 MPLTTIALSGLPPH---KIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHhcCCHH---HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888889999 999999999999999999998887766
No 157
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.27 E-value=5.7e-11 Score=97.00 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=89.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhh-hHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSAL-MITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
+.++.+.+...+...++..++.+..|+++||++||+.. ....+...++..+....++....+..-.+.+++.....+..
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIF 354 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHH
Confidence 45677889999999999999999999999999987753 33443444433222222222222222223333333333444
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVS 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~ 208 (219)
.....|.+|++ +|++++|+.+....+|+.++|.+.+.+ +|++.+++.++..
T Consensus 355 ~~~~~~~~~~~---~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 355 WTTPDQSISLQ---ARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HhhcccccchH---HHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 55667889999 999999999999999999999888776 5888887766543
No 158
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.26 E-value=1.2e-10 Score=95.20 Aligned_cols=128 Identities=16% Similarity=0.104 Sum_probs=91.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCC-chhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGR-KSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|++..+.|++.+...++..+++++.|+++||+|| |+++.++.++..+...+..+.++++.+.+.|++.|++.+...+..
T Consensus 34 g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 113 (418)
T TIGR00889 34 HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALT 113 (418)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHH
Confidence 8999999999999999999999999999999965 778888888887888888888899999999999999776665554
Q ss_pred hhhhh--------hccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 155 AVYAA--------ECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 155 ~~~~~--------~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
.+... |..... .|.+..| .+|..++|.+++.+ .|+ +|++.++..++..+
T Consensus 114 ~~l~~~~~~~~g~~~~~~~---~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 114 NSISYANLPQAGLDVVTDF---PPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred HHHHHHHHhhcCCCchhcC---CCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 44322 222222 3444444 24666666666655 343 35555555444443
No 159
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.25 E-value=2.3e-10 Score=92.15 Aligned_cols=113 Identities=20% Similarity=0.281 Sum_probs=89.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-----SDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.+.+.+...++..+++++.|++.||+|||+.+..+..+..++..+.... ++...+....++.|++.+..
T Consensus 238 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (385)
T TIGR00710 238 GVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMI 317 (385)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999888877777766555442 23444555677888988888
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHH-HHHHHHHHHh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALT-SGILLSYLTG 192 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~ 192 (219)
.+....+..|..| + +|+++.++.+.... .|...++.++
T Consensus 318 ~~~~~~~~~~~~~-~---~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 318 SSIAMAYALEDFP-H---VAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHhccCc-c---cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888876 5 69999998776654 4666666655
No 160
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=1.2e-10 Score=96.91 Aligned_cols=138 Identities=15% Similarity=0.012 Sum_probs=98.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCch-------hhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKS-------ALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVG 148 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 148 (219)
|+++.+.+.+.+...++..++.++.|+++||+|||+ ...+..++.++..++....++.+...+..++.+++.+
T Consensus 284 g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (476)
T PLN00028 284 GLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQ 363 (476)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998762 2222333333333444445555555555566666655
Q ss_pred cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 149 LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
...+...+++.+..| + +||+..++.+.+..+|+.++|.+...- +|+..|++.+++.+++.++.++
T Consensus 364 ~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 364 AACGATFGIVPFVSR-R---SLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HhhhhhcccCcccCh-h---hchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHh
Confidence 555556666666654 5 799999999888888888888775532 6999999888777777665543
No 161
>PRK10054 putative transporter; Provisional
Probab=99.25 E-value=1.4e-10 Score=94.18 Aligned_cols=129 Identities=8% Similarity=-0.056 Sum_probs=102.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-SDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
+.+....+...+...+.....++..|++.||+++|+.+..+.++..++.....+. ++.+.+.+..++.|++.+...|..
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 319 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGE 319 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 5566667777777777777778889999999999999999888888877766654 566667778889999988878888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVS 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~ 208 (219)
..++.+..|++ .|+++.+..+ ...+|..++|.+++.+ +....|++.+...
T Consensus 320 ~~~~~~~~p~~---~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~ 373 (395)
T PRK10054 320 YMLIDHIAPPG---MKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAI 373 (395)
T ss_pred HHHHHHhCCcc---cceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHH
Confidence 88999999999 9999988655 4558999999999888 5555555544433
No 162
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.25 E-value=2.3e-10 Score=93.12 Aligned_cols=116 Identities=14% Similarity=0.040 Sum_probs=94.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-----hhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-----SDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.++......++..++.++.|+++||+|+|+.+.++.+...++..+.... ++.+.+.+..++.|++.+..
T Consensus 247 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 326 (406)
T PRK15402 247 QLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA 326 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH
Confidence 8888889988888888999999999999999999999988888777776665543 34556677788899988877
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+......... +++ +||+..+.++....+|..+++.+.+.+
T Consensus 327 ~~~~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 327 NAGLYRLTLFS-SDV---SKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred hhhHHHHHhhh-ccc---cccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76666555443 447 899999999999999999999998887
No 163
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=5.9e-10 Score=90.54 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=101.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH-HHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP-SLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|+++.+.+.......++..++.++.+++.||.+ |+.+..+..+ .....++....++.+.+.+..++.|++.+...+..
T Consensus 248 g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 326 (394)
T PRK10213 248 GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGW 326 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHH
Confidence 889999999999999999999999999999954 4444444333 33444444556677777788899999998888888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~ 212 (219)
.+++.+..| + ++++..+.......+|..+|+.+++.+ |++..++..++..++..
T Consensus 327 ~~~~~~~~~-~---~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 327 STWITRSLA-D---QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHCc-c---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 888998887 4 466777777788888999999998888 77777777665554443
No 164
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.24 E-value=7.2e-10 Score=90.00 Aligned_cols=130 Identities=18% Similarity=0.130 Sum_probs=101.9
Q ss_pred hhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcch
Q psy13786 72 PQMSYLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
+...|.++.+.|+..+...++..++++..+++.||.++|+.+..+. ..++..+...+.++++...+..++.|++.+...
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~ 311 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFV 311 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhh
Confidence 3333899999999999999999999999999999999998887775 334444445556777767777888999988888
Q ss_pred hhhhhhhhhccCCCCccc-hhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDL-RGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGA 205 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~ 205 (219)
+...+.+.|..|++ . +|++.++.+....+|..++..+.+.. +-+..+.+.+
T Consensus 312 ~~~~~~~q~~~~~~---~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (393)
T PRK11195 312 VPMNALLQHRGHVL---VGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVG 366 (393)
T ss_pred hhHHHHHHhhCccc---ccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 77888888876665 5 79999999999999999998887766 4444444433
No 165
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.23 E-value=3.2e-10 Score=103.50 Aligned_cols=129 Identities=11% Similarity=-0.015 Sum_probs=105.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--------------------hhHHH
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--------------------SDLIN 135 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 135 (219)
|.++.+.+++.+...++.+++++..|+++|+.++++.+..+.++..++.+...+. ++.+.
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWR 336 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHH
Confidence 8899999999999999999999999999998888877766666655555444332 66677
Q ss_pred HHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHH
Q psy13786 136 LYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFV 207 (219)
Q Consensus 136 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~ 207 (219)
+.+..++.|++.+...+...+++.+..|++ .||+++|..++...+|..+++.+.+.+ ++...+++.++.
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 337 ILIDLFGLAAAGGLYIVPLFAALQAWANPA---HRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhhCCcc---cceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 778888999999999989999999999999 999999999999999999999887766 445555544443
No 166
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.23 E-value=1.3e-09 Score=85.29 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=100.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|++..+++.+...-+....+.+++.|.++||+|||+.-+..+++..++++ +-..+++..++++|++.|++....++.-.
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999885 45568899999999999999999888887
Q ss_pred hhhhhccCCCC-c-cchhhHHHHHH-HHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHN-T-DLRGSLSTWST-IALTSGILLSYLTGAFF------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~-~-~~r~~~~~~~~-~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+++..-..+++ . +..+...+... ..+++-.+.+.+++..+ |-..+|.....+.+++.+++.
T Consensus 144 sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 144 SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 76543332221 0 02333333222 22333334444444443 236678777777666665543
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.23 E-value=6.3e-10 Score=90.14 Aligned_cols=163 Identities=13% Similarity=0.018 Sum_probs=115.4
Q ss_pred HHHHHhhhhhhccccccccchhhcc---cCChhhHHHH--HHHHHHHHHHHHhhH-hHhhhhhCCchhhhHhhHHH-HHH
Q psy13786 51 LIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWF--ASISAITMPIGCLLS-GPIIDKYGRKSALMITNVPS-LCG 123 (219)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~-g~l~d~~Grr~~~~~~~~~~-~~~ 123 (219)
..+...++.++.-.+...+.+|.+. |.+.++.|.. .+...+...+.+++. ++..||+||||..++...+. ...
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 3444556777777777778888777 9999999997 466788888888888 45799999999976655332 222
Q ss_pred HHHHH-h--hhh-HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----
Q psy13786 124 WLLMA-T--KSD-LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---- 195 (219)
Q Consensus 124 ~~~~~-~--~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---- 195 (219)
..... + ..+ ...+.....+.++..+...+....+..|..+++ +++...+....+..+|..+++...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~---~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 84 LASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR---TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222 1 222 223334445555666667777788888888888 888888888888888988888766554
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+||..|++.++..++..+..+
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888776655543
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.23 E-value=1.6e-10 Score=96.59 Aligned_cols=117 Identities=13% Similarity=0.043 Sum_probs=102.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT---KSDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|.++.+.+.......++..++.++.|++.||+|||+.+..+.++..++..+... .++.+......++.|++.|...+
T Consensus 291 g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~ 370 (495)
T PRK14995 291 GLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALL 370 (495)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHH
Confidence 899999999999999999999999999999999999988888888777665543 24555666778999999998888
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.......+..|++ +++.+.++++....+|..+|+.+.+.+
T Consensus 371 ~~~~~~~~~~~~~---~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 371 ASTSAIMAAAPPE---KAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHHHhcCCHH---hcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999 999999999999999999998888776
No 169
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.22 E-value=1e-10 Score=92.71 Aligned_cols=138 Identities=14% Similarity=0.034 Sum_probs=108.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-------hhHHHHHHHHHHHhhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-------SDLINLYISRLLSGLSVG 148 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~ 148 (219)
+.++.+.+...+.+.+...+..+.+|+++||+|.+|++.+....++++..+.... .+....+...+..++..|
T Consensus 250 g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G 329 (417)
T COG2223 250 GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG 329 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999998888877764 334444443333444444
Q ss_pred cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 149 LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
.....+..++...+|++ -|...|+.....++|++.-|...+.. ++...|++.....+++.+..+.
T Consensus 330 ~GnGsvfk~Ip~if~~~----~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 330 LGNGSVFKMIPVIFPKE----TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cCcchheeechHHHHhh----hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 44444566677777765 78999999999999998888777766 5888999988888888776653
No 170
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.21 E-value=1.1e-10 Score=92.70 Aligned_cols=111 Identities=24% Similarity=0.266 Sum_probs=96.5
Q ss_pred cCC-hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLT-IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK---SDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.+ ..+.+...+...+...++.++.|++.||+|+|+..........+..+..... ++....++..++.|++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (352)
T PF07690_consen 238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVF 317 (352)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 888 7899999999999999999999999999999888877777766666655443 345666778888999999999
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSY 189 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 189 (219)
+....++.|..|++ +||+..++.+...++|..++|
T Consensus 318 ~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 318 PILFSLIQELVPPE---YRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHCCCHTC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999 999999999999999999987
No 171
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.21 E-value=2e-10 Score=91.15 Aligned_cols=136 Identities=18% Similarity=0.201 Sum_probs=121.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|++..+...+....++..++|++++|+|.||+|.|+++.++.+++.+.++...+......+++.-.+.|...|..++..-
T Consensus 284 gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SR 363 (438)
T COG2270 284 GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSR 363 (438)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888877777788888999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~ 214 (219)
+|..+..|++ +-++..|+++.....+++++|.+.+.+ +-|..+....++..+.++.
T Consensus 364 Sy~~~lvp~~---k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 364 SYLARLVPKG---KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHhCCCc---cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 9999999999 999999999999999999999998887 5666666655555555443
No 172
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.21 E-value=9.3e-10 Score=88.52 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=120.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+.+....|.+.+..-+.-++.-.+..++.+|+|.|+.++++..++.+=.+.++++++.+.+.+.+.+.|+..+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666788899999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAMI 218 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~ 218 (219)
-|+++.+|++ ..++...+ .+....+|..+.+.+++.+ |++..|++.+.+.++..++..+.
T Consensus 335 kYI~~~fd~r---lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 335 KYITAHFDKR---LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHHHHHS-GG---GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHh---HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheee
Confidence 9999999999 88888886 5788899999888888887 88889988888877766665553
No 173
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=3.1e-10 Score=90.74 Aligned_cols=116 Identities=14% Similarity=-0.004 Sum_probs=91.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh-CCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY-GRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|.+..+.+...+...++.+++++..|++.||+ +||+.+.++.++.+++.....+.++..... ..++.|++.+...+..
T Consensus 228 g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~ 306 (355)
T TIGR00896 228 GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLA 306 (355)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHH
Confidence 88999999999999999999999999999999 566677777777777766666554332222 4567899988888887
Q ss_pred hhhhhhccC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 155 AVYAAECIT-IHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 155 ~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
...+.+..+ ++ +++...++.+....++..++|.+.+.+
T Consensus 307 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 307 LTLIGLRSRQAA---QAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHHHhccCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766554 45 678888988888888888999888876
No 174
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.20 E-value=3.3e-10 Score=93.89 Aligned_cols=144 Identities=12% Similarity=0.055 Sum_probs=95.7
Q ss_pred ccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhh--------hHhhHHH--HHHHHHHHh-hhh
Q psy13786 68 AVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSAL--------MITNVPS--LCGWLLMAT-KSD 132 (219)
Q Consensus 68 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~--------~~~~~~~--~~~~~~~~~-~~~ 132 (219)
..++|.+. |.+..+.++..+...++..++.++.|+++||+++|+.. ..+.... .+..+.... ..+
T Consensus 281 ~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (465)
T TIGR00894 281 PTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA 360 (465)
T ss_pred HHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34555544 88999999999999999999999999999998765322 1111111 111111122 223
Q ss_pred HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHH
Q psy13786 133 LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-------WYTTVAYIGA 205 (219)
Q Consensus 133 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-------~w~~~~~~~~ 205 (219)
....++...+.+.+.+...+.......|..| + .+|...++.+....+|..++|.+.+.+ +|+..|.+.+
T Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~ 436 (465)
T TIGR00894 361 FYLTIIILTLANAVSSGPLAGVLINSLDLAP-R---FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMA 436 (465)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-h---HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHH
Confidence 3334444455555555444444445555554 4 699999999999999999999888875 3888888888
Q ss_pred HHHHHHHHHH
Q psy13786 206 FVSFLSLVLV 215 (219)
Q Consensus 206 ~~~~~~~~~~ 215 (219)
+..++..++.
T Consensus 437 ~~~~i~~i~~ 446 (465)
T TIGR00894 437 FVNILCVIFY 446 (465)
T ss_pred HHHHHHHHHe
Confidence 7777766544
No 175
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.20 E-value=1.6e-09 Score=88.89 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=102.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS--DLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|.+ ...+.......++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++..++.|++.+...+.
T Consensus 257 ~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~ 335 (428)
T PF13347_consen 257 GNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVI 335 (428)
T ss_pred cCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccc
Confidence 444 5677888889999999999999999999999999999999999998888775 8899999999999999999999
Q ss_pred hhhhhhhccCCCC---c-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 154 AAVYAAECITIHN---T-DLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 154 ~~~~~~~~~~~~~---~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+++++|..+.+| + ++.|...+.++....++..+++.+.+.+
T Consensus 336 ~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 336 PWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred cccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 9999999987543 1 2458888899999999998888877765
No 176
>KOG2504|consensus
Probab=99.16 E-value=4.2e-10 Score=93.68 Aligned_cols=148 Identities=20% Similarity=0.273 Sum_probs=128.5
Q ss_pred ccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC--CchhhhHhhHHHHHHHHHHHhhhhHHHHHHHH
Q psy13786 66 FPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYG--RKSALMITNVPSLCGWLLMATKSDLINLYISR 140 (219)
Q Consensus 66 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (219)
+....+|.+. +++..+.+.+.++..+...++.++.|+++|+.. ++.+..++.+..+++...+.+.++++.++..-
T Consensus 316 ~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~ 395 (509)
T KOG2504|consen 316 VPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFS 395 (509)
T ss_pred HHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3334455544 999999999999999999999999999999987 44566677888888888889999999999999
Q ss_pred HHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHH
Q psy13786 141 LLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 141 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.+.|++.|.........+.|..+.+ +-..+.|+...+.+++.+++|++++.+ +|...|+..++..+++....
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~---~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLE---KLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChh---hcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 9999999999888889999999999 899999999999999999999999987 69999999888877776544
Q ss_pred H
Q psy13786 216 A 216 (219)
Q Consensus 216 ~ 216 (219)
+
T Consensus 473 ~ 473 (509)
T KOG2504|consen 473 L 473 (509)
T ss_pred H
Confidence 3
No 177
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.16 E-value=1.1e-09 Score=89.83 Aligned_cols=143 Identities=12% Similarity=0.025 Sum_probs=96.4
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-h-----hhHHHHHHHHHHHhhhhhc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-K-----SDLINLYISRLLSGLSVGL 149 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~G~~~~~ 149 (219)
.++............+...+..+++|+++||+|+||++.++.+...++...... . .+.+.+.+..+...++.|.
T Consensus 282 ~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~ 361 (462)
T PRK15034 282 QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGL 361 (462)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcc
Confidence 444433333344556778888999999999999999999988877776643222 1 2455555555444455555
Q ss_pred chhhhhhhhhhccCC------C-------C-----ccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHH
Q psy13786 150 ATTPAAVYAAECITI------H-------N-----TDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAF 206 (219)
Q Consensus 150 ~~~~~~~~~~~~~~~------~-------~-----~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~ 206 (219)
....+.-++.+.+|+ + + .++-|...|+......+|+++.|.+.+.. ++...|+...+
T Consensus 362 gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~ 441 (462)
T PRK15034 362 GSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLI 441 (462)
T ss_pred cchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHH
Confidence 555566666666663 0 0 00346777888888999888888766555 67778888888
Q ss_pred HHHHHHHHHHhh
Q psy13786 207 VSFLSLVLVAMI 218 (219)
Q Consensus 207 ~~~~~~~~~~~~ 218 (219)
..+++.++.|++
T Consensus 442 ~~~~~~~~~w~~ 453 (462)
T PRK15034 442 FYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHH
Confidence 888888777653
No 178
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.16 E-value=4.3e-10 Score=89.92 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=87.5
Q ss_pred cCChhhHHHHHHHHH-HHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-----------hhHHHHHHHHHHH
Q psy13786 76 YLTIDQASWFASISA-ITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-----------SDLINLYISRLLS 143 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~ 143 (219)
|+++.+.+.+.+... ++..++.+++|++.||+|||+.+..+.++.++...+..+. ++.+.+....++.
T Consensus 240 g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (356)
T TIGR00901 240 GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLE 319 (356)
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHH
Confidence 889999998887665 6788999999999999999999888888877766655442 3456677778899
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHH
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALT 182 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 182 (219)
+++.+...+...+++.|.+|++ +||+..++.+...+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 320 AVTGGLGTVAFVAFLSKLSNPK---FGATQMALLSSLSA 355 (356)
T ss_pred HHHhHHHHHHHHHHHHHhcCCC---ccHHHHHHHHHHHh
Confidence 9999999999999999999999 99999998877654
No 179
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.16 E-value=1.1e-09 Score=88.08 Aligned_cols=142 Identities=15% Similarity=0.053 Sum_probs=95.4
Q ss_pred ccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc---hhhhH-hhHHHHHHHHHHHhhhhHHHHHHHH
Q psy13786 68 AVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK---SALMI-TNVPSLCGWLLMATKSDLINLYISR 140 (219)
Q Consensus 68 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (219)
..++|.+. |++.. .+...+...+...++ .++++||..|| +.... .....++.........+....++..
T Consensus 212 ~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 287 (368)
T TIGR00903 212 AIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFI 287 (368)
T ss_pred HHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 34556555 66654 555555555555555 46777776543 33332 3334444444444444444445555
Q ss_pred HHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHH
Q psy13786 141 LLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 141 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.+.+++.....+..+++.+|.+|++ .|+++.|+.+....+|+..+|.+.+.+ +.+..|.+.++..++..+..+
T Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~p~~---~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 288 GIAGLLMLPAYAIIMDWIGKFCDKE---LHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcchh---hcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 6677777777777889999999999 999999999999999998888887755 677778777777777666543
No 180
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.16 E-value=2.6e-09 Score=86.92 Aligned_cols=134 Identities=12% Similarity=0.136 Sum_probs=91.4
Q ss_pred cCChhhHHHHHHHHH-HHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH---Hhh-hhHHHHHHHH----HHHhhh
Q psy13786 76 YLTIDQASWFASISA-ITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM---ATK-SDLINLYISR----LLSGLS 146 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~----~l~G~~ 146 (219)
|.++.+.+++..... ++..++.++.|++.||+|||+.+..+.++..+..+.. +.. ++.+.+.+.. +..|++
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 320 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMG 320 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 889999999886654 5688999999999999999998877776655554333 333 4555555444 345555
Q ss_pred hhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 147 VGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.+...+....++.+.+|.+ +++. .+...++|...++.+++.+ ||+..|...++++++..++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 321 TAAFVALLMALCNRSFSAT---QYAL----LSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHhcCCCCcHH---HHHH----HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 6666666777777777766 6544 3333444554444455544 999999998888877766554
No 181
>KOG2563|consensus
Probab=99.16 E-value=1.9e-09 Score=86.29 Aligned_cols=152 Identities=14% Similarity=0.092 Sum_probs=121.1
Q ss_pred CCchHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHh
Q psy13786 40 TPTLFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMIT 116 (219)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~ 116 (219)
.+...+||.+++..++..+.+++.+-.++++..... | +....-|.+.++.+.++...+.+-|+.||+|-|....++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 456788999999999988888888777776654444 6 666778999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh------hhHH--HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHH
Q psy13786 117 NVPSLCGWLLMATK------SDLI--NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLS 188 (219)
Q Consensus 117 ~~~~~~~~~~~~~~------~~~~--~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 188 (219)
.++..++..+-..+ +.++ ....+..+.+..+-.......-...-++|++ +|..+..+-.+++.+|..++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~---qra~A~~~~v~~n~LGvavg 192 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD---QRAIATVLGVMGNPLGVAVG 192 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc---hhhhhhhHHHhcchHHHHHH
Confidence 99999999886653 2334 5557778888776655555455666789999 99999998888877887777
Q ss_pred HHHhhhh
Q psy13786 189 YLTGAFF 195 (219)
Q Consensus 189 ~~~~~~~ 195 (219)
.++...+
T Consensus 193 ~llppil 199 (480)
T KOG2563|consen 193 FLLPPIL 199 (480)
T ss_pred hhcccee
Confidence 7776655
No 182
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.15 E-value=2.6e-09 Score=86.69 Aligned_cols=137 Identities=20% Similarity=0.276 Sum_probs=107.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-hhHHHHHH----HHHHHhhhhhcch
Q psy13786 77 LTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-SDLINLYI----SRLLSGLSVGLAT 151 (219)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~l~G~~~~~~~ 151 (219)
.+....+...+...+.=++.-...+++..|+|.|+++.++.+..++=..+.+.. ++.+...+ ...+.|+..+...
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 666777777777777777888889999999999999999999999999888886 55444333 3456999999999
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHH-HHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTI-ALTSGILLSYLTGAFF----------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~----------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.....|+.+..|++ .|+++.++++. ..++|..++..+++++ .|...+.+.+...++..++.+
T Consensus 320 ~a~~~yi~~~~p~~---~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 320 AASVRYIDRIAPPE---LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHhCCcc---chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 99999997665 5789999999999988 344455555555444444443
No 183
>PRK10133 L-fucose transporter; Provisional
Probab=99.14 E-value=1.8e-09 Score=88.87 Aligned_cols=130 Identities=12% Similarity=0.043 Sum_probs=99.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+.....+.++..++++..|++.||+|||+++..+.++..+...+..+.++.. .+....+.|++.+..+|...
T Consensus 291 g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~~ 369 (438)
T PRK10133 291 GMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTIF 369 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888877776666665555532 24567789999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----h-hHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----W-YTTVAYIGAFVSFLS 211 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~-w~~~~~~~~~~~~~~ 211 (219)
+...|..|++ .+.+.++..+ ..+|..++|.+.+.+ | -+..|++..+..+..
T Consensus 370 s~a~~~~~~~----~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 370 SLGIKNLGQD----TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHHHcccchh----hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 9999987764 5566666654 335666777676666 4 566666554443333
No 184
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.13 E-value=1.2e-09 Score=90.58 Aligned_cols=133 Identities=17% Similarity=0.140 Sum_probs=98.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC-----CchhhhHhhHHHH-HHHHHHHhhhhHHHHH-HHHHHHhhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYG-----RKSALMITNVPSL-CGWLLMATKSDLINLY-ISRLLSGLSVG 148 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rr~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~G~~~~ 148 (219)
|+++++.+...+...+...+-.+ +|+++||++ ||+.++++.++.. +.....+..++..... +..++.+++.+
T Consensus 57 g~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a 135 (468)
T TIGR00788 57 GLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKA 135 (468)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999988555 999999997 6777777766652 3333333334443333 47889999999
Q ss_pred cchhhhhhhhhhccCCCCccchhhHHHHHH---HHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHH
Q psy13786 149 LATTPAAVYAAECITIHNTDLRGSLSTWST---IALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~ 213 (219)
...+...++..|..+ + ++....+... .+..+|..+++.+++.+ +|+..|++.++..++..+
T Consensus 136 ~~dv~~da~~~e~~~-~---~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 136 LYDVLVDSLYSERIR-E---SPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHhHHHHHhhhhh-c---CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 999999999999998 5 4544433333 33447888888888876 899999888877766643
No 185
>PRK09848 glucuronide transporter; Provisional
Probab=99.12 E-value=6e-09 Score=86.01 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=94.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|.++...++......++..++.++.+++.||+|+|+.+.++.++..++.+...+. .+.+.+.+..++.|+|.+...+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~ 339 (448)
T PRK09848 260 NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTV 339 (448)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 6655555554555567788899999999999999999999988888877766654 35666667788899999999999
Q ss_pred hhhhhhhccCCCC---c-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 154 AAVYAAECITIHN---T-DLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 154 ~~~~~~~~~~~~~---~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
..++..|..+.+| + +++|...+.++....+|..+++.+.+.+
T Consensus 340 ~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 340 MWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887642 1 2458899999999999999988887665
No 186
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.11 E-value=3.3e-09 Score=86.35 Aligned_cols=135 Identities=15% Similarity=0.142 Sum_probs=103.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhh-hhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIID-KYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
+.++.+.+++.+...++...+....+++.| |++.|+.+..+.++..++.++.+..++.+.+.+...+.+++.+...+..
T Consensus 239 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~ 318 (400)
T PRK11646 239 AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPAR 318 (400)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccH
Confidence 446778888888877776666655666665 5666777777888888887777778888777777788888888788888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-h-------hHHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-W-------YTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-~-------w~~~~~~~~~~~~~~~~ 213 (219)
.+++.|..|++ +||+..++++....+|..++|.+++.+ + ....++..++..++..+
T Consensus 319 ~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 319 ETLSASLADAR---ARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHhcCCcc---cchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999988 1 23455554555444443
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.10 E-value=4.7e-09 Score=84.45 Aligned_cols=116 Identities=9% Similarity=0.096 Sum_probs=81.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH---Hh-hhhHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM---AT-KSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.++..+...++..+++++.|++.||+|||+.+..+..+..+..+.. .. ..+.+...+...+.+.+.+...
T Consensus 226 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T PRK11102 226 GVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMIS 305 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999999999999888776544332222 22 2234444444444444445555
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHH-HHHHHHHHHHHhhhh
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIA-LTSGILLSYLTGAFF 195 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~ 195 (219)
.....++.|..| + +|++..++.+.. ..+|..+++.++...
T Consensus 306 ~~~~~~~~~~~~-~---~~g~~~~~~~~~~~~~g~~~g~~~~~~~ 346 (377)
T PRK11102 306 SNAMAVILDEFP-H---MAGTASSLAGTLRFGIGAIVGALLSLAP 346 (377)
T ss_pred HHHHHHHhcccc-c---cchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 555666777766 6 799999976543 567777777776544
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.09 E-value=6.7e-09 Score=84.15 Aligned_cols=125 Identities=11% Similarity=0.014 Sum_probs=83.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.++.+.+...+...++..++.++.+++.||+|||+.+.++.++..++.+.....++.........+.+.+.+...+.
T Consensus 235 g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-- 312 (392)
T PRK10473 235 GFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV-- 312 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--
Confidence 889999999999999999999999999999999999999998888887777776655544444444444444333332
Q ss_pred hhhhhccCCCCccch-hhHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLR-GSLSTWSTIALTSGILLSYLTGAFFWYTTVAYIGA 205 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~~~w~~~~~~~~ 205 (219)
....+..|.+ +| +.+.++......+|..+++.+.+..++.......+
T Consensus 313 ~~~~~~~~~~---~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~ 360 (392)
T PRK10473 313 AMSQALGPFS---LRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIG 360 (392)
T ss_pred HHHHHhccCc---ccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 3334455655 44 44444555555666666666655555544333333
No 189
>PRK09669 putative symporter YagG; Provisional
Probab=99.06 E-value=4e-09 Score=87.00 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=96.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchhhh-HhhHHHHHHHHHHHhhhh------HHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSALM-ITNVPSLCGWLLMATKSD------LINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G 144 (219)
|+++.+.|.+.++..+...+..|+.|+++|| +||||..+ ++.+..++...+....++ ...+.+...+.+
T Consensus 41 gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~ 120 (444)
T PRK09669 41 GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLS 120 (444)
T ss_pred CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 78866555 566666666655444332 344445555666
Q ss_pred hhhhcchhhhhhhhhhccCC-CCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECITI-HNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~~ 212 (219)
.+.+.......++.+|+.++ + +|.+..+.......+|..+++.+...+ +|+..+.+.++++++..
T Consensus 121 ~~~t~~~ip~~al~~~~t~~~~---eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 121 LVYTAINVPYCAMPGAITNDPR---ERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF 197 (444)
T ss_pred HHHHhhcchHHHhHHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 66666777777899998854 5 799888877777777766665433221 57777776666665554
Q ss_pred HH
Q psy13786 213 VL 214 (219)
Q Consensus 213 ~~ 214 (219)
+.
T Consensus 198 ~~ 199 (444)
T PRK09669 198 FC 199 (444)
T ss_pred HH
Confidence 43
No 190
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.05 E-value=1.6e-08 Score=76.49 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=101.5
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh-------hhHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK-------SDLI 134 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~ 134 (219)
+.++.+-|++. |+|.+|...+.+.-.+|..+| ++.|.+.|++|+|.++.++.+...++......+ .++|
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 33444555555 999999999999999999875 888999999999999999999999888776652 3567
Q ss_pred HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 135 NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 135 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+.+..++.|.+.+...+.......+.+|. +||++.|+.-...++++.+-..+...+
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~----~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFPR----SRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCcc----ccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 777777888888777777777888899985 599999999998888877766665555
No 191
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=1.9e-08 Score=83.65 Aligned_cols=118 Identities=8% Similarity=0.095 Sum_probs=90.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhcchh
Q psy13786 78 TIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-----KSDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
++...+.+.+...++.+++.++.++++||+|+|+.+.++.++..++.+.... .++.+.+++..++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777889999999999999999999998888776655554432 34556666777888999998889
Q ss_pred hhhhhhhhccCCCC---c-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 153 PAAVYAAECITIHN---T-DLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 153 ~~~~~~~~~~~~~~---~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
..+++++|..+.+| + ++.|...+.......+|..+++.+.+.+
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999966332 1 1346678888888889988888877765
No 192
>KOG4686|consensus
Probab=99.00 E-value=7.9e-09 Score=78.41 Aligned_cols=115 Identities=17% Similarity=0.095 Sum_probs=93.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHH-HHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSL-CGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|+|+..++.+.+.......+.+++.|.++||+|++-..+.+..+.. .+.....+ +.+.=++...+.|+.........
T Consensus 296 GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcsl 373 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSL 373 (459)
T ss_pred CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999999999987776544333 33333333 22223455667788777777778
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
++.++...|++ +-|++.+..+...++|-.+.|++++.+
T Consensus 374 WP~va~~vpE~---qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 374 WPCVASLVPEE---QLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred hhhhhhhCCHH---HhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 88999999999 999999999999999999999999988
No 193
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.97 E-value=2.2e-07 Score=74.12 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=118.4
Q ss_pred cccchhhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhh-hhCCchhhhHhhHHHHHHHHHHHh---hhhHHHHHHHHHH
Q psy13786 67 PAVALPQMSYLTIDQASWFASISAITMPIGCLLSGPIID-KYGRKSALMITNVPSLCGWLLMAT---KSDLINLYISRLL 142 (219)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 142 (219)
.-|+-.+..|++..+...++.....|..+|-...|++.. |.++|+.-.+++....++..+... ..+.+.+...-++
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 345544444999999999999999999999999998766 677778777887777776665444 4677888899999
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--------------hhHHHHHHHHHHH
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--------------WYTTVAYIGAFVS 208 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~~~~~~~~ 208 (219)
.|++.|.+.....+.+.+..+++ +.|..+|.+...+.++..++..+++.. +|..+|.+.++..
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~---~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll 387 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAG---RAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLL 387 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCc---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999988888888887766 5667777777666
Q ss_pred HHHHHHH
Q psy13786 209 FLSLVLV 215 (219)
Q Consensus 209 ~~~~~~~ 215 (219)
++++.+.
T Consensus 388 ~~a~~ll 394 (403)
T PF03209_consen 388 LAALVLL 394 (403)
T ss_pred HHHHHHH
Confidence 6655443
No 194
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.96 E-value=5.6e-08 Score=80.92 Aligned_cols=132 Identities=19% Similarity=0.179 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCC-----chhh--hHhhHHHHHHHHHHHh---------hhhHHHHHHHHHHHhh
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGR-----KSAL--MITNVPSLCGWLLMAT---------KSDLINLYISRLLSGL 145 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-----r~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~ 145 (219)
.+++.+...+..++.+++..++-.|.+| +... .+|.++.+++....++ ..|++.++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788888888888888876654333333 3333 6778888877777664 4688889999999999
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
|.....|....++.+..|++ .||+.+|++.....+|..+++.+.... +|.+.|...++.+++..++.+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~---~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQR---LMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999999999999999999998887765 677777777766666555543
No 195
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.94 E-value=5.9e-08 Score=74.77 Aligned_cols=126 Identities=29% Similarity=0.353 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhh--HHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSD--LINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
...++..+...++..++.++.|++.||+|||+.+..+......+.+...+..+ .+.+.+.|++.|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46889999999999999999999999999998888887665555566666655 8888999999999999899999999
Q ss_pred hhhccCC-CCccchhhHHHHHHH-HHHHHHHHHHHHhhhh------hhHHHHHHHHHHH
Q psy13786 158 AAECITI-HNTDLRGSLSTWSTI-ALTSGILLSYLTGAFF------WYTTVAYIGAFVS 208 (219)
Q Consensus 158 ~~~~~~~-~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~ 208 (219)
+.|..|+ + +|+...+.... ...+|..++|.++..+ +|+..+.......
T Consensus 119 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 119 LSEWFPEAT---ERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHhcCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999998 6 79999997777 5777888888666655 5888666555444
No 196
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.93 E-value=9e-08 Score=80.18 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHhhH----hHhhhhhCCchhhhHhhHHHHHHHHHHHhhhh---------HHHHHHHHHHHhhhhh
Q psy13786 82 ASWFASISAITMPIGCLLS----GPIIDKYGRKSALMITNVPSLCGWLLMATKSD---------LINLYISRLLSGLSVG 148 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~----g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~G~~~~ 148 (219)
.+++++...+...+.+++. +++.||++.++.+.++.++.+++.+......+ .+.++...++.|++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5566667776666666665 55566666667888899999999888776654 4567888999999999
Q ss_pred cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--------------hhHHHHHHHHHHHHHHHH
Q psy13786 149 LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--------------WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~~~~~~~~~~~~~ 213 (219)
...|....++.+..|++ .||+.+|.+.....+|..++..+.... ++.+.|...++.+++..+
T Consensus 398 ~~~p~g~s~~~~~aP~~---~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~ 473 (500)
T PRK09584 398 MISGLGLAMVAQLVPQR---LMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAV 473 (500)
T ss_pred HHhHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999888888888777666421 256777776666554433
No 197
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.93 E-value=3.9e-09 Score=84.53 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=79.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh--hh--hHHHHHHHHHHHhhhhhcch
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT--KS--DLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~G~~~~~~~ 151 (219)
|.++.+.+...+...+...++.++.|+++||+|||+.+..+......+..+... .. +.+...+...+.+++.|...
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGN 336 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcccc
Confidence 888999999999999999999999999999999998888777666665555443 22 55555555555555666666
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHH
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSG 184 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 184 (219)
+...+.+.|..| + +||+..|+.+...++|
T Consensus 337 ~~~~~~~~~~~~-~---~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 337 GSTFALVPHIFR-R---ATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhhhcchhhch-h---hcccHHHHHHHhccCC
Confidence 667778888887 5 6999999888776654
No 198
>KOG2532|consensus
Probab=98.92 E-value=5.9e-09 Score=85.94 Aligned_cols=164 Identities=12% Similarity=0.072 Sum_probs=108.2
Q ss_pred HHHHHHhhhhhhccccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc--------h-hhhHh
Q psy13786 50 GLIVILPGVAPGMSFGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK--------S-ALMIT 116 (219)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--------~-~~~~~ 116 (219)
+..+.++.+...........+.|.+. |++..+.|+..++..+.+.+..+++|.++||.-+| | .-.++
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 44444555555555666666777777 99999999999999999999999999999988552 2 22234
Q ss_pred hHHHHHHHHHHHhhhh-HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 117 NVPSLCGWLLMATKSD-LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 117 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
....+++.+..++.++ .....+.-+....+..+..............++ +-+..+++.+....+.++++|.+.+.+
T Consensus 340 ~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq---~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 340 FGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQ---HAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 4444455555555442 111111111122222222222222222222455 689999999999999999999998877
Q ss_pred -------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 -------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 -------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
.|+++|++.+++.++..+++.
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFL 444 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchhee
Confidence 899999999988888765443
No 199
>PRK11043 putative transporter; Provisional
Probab=98.91 E-value=8.6e-08 Score=77.95 Aligned_cols=116 Identities=12% Similarity=0.044 Sum_probs=87.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH---Hh--hhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM---AT--KSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.++......++..++....+++.||+|+|+.+....+..+++.+.. .. .++.+.+.+...+.|++.+..
T Consensus 234 g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (401)
T PRK11043 234 GYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI 313 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 8899999988888888999999999999999999987766555444443322 12 345555556667788888888
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+.......|..| + +|+++.++++.....+...++.+.+.+
T Consensus 314 ~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 314 YPIVVAQALRPFP-Q---ATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHhhhCc-c---cChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888777777765 5 699999999888777777777777665
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.90 E-value=1.7e-07 Score=73.47 Aligned_cols=163 Identities=15% Similarity=0.067 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHH
Q psy13786 46 LIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSL 121 (219)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~ 121 (219)
.|.+.+.+.+-++. .+....++|.+. |+|..+.|+..+...+.+...++....+.+| -.+|+..+....+..
T Consensus 210 aW~vtLfmGlqS~~----~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l 285 (395)
T COG2807 210 AWQVTLFMGLQSLL----YYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLML 285 (395)
T ss_pred hHHHHHHHHhhHHH----HHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 44444444433333 333345677766 9999999999999999999999999999985 456777777777777
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccch-hhHHHHHHHHHHHHHHHHHHHhhhh-----
Q psy13786 122 CGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLR-GSLSTWSTIALTSGILLSYLTGAFF----- 195 (219)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~~~~~~~~~~----- 195 (219)
++...+.+.+....+.- .++.|++.|..++.....+.+-.++. ++ +.-.++.+....+=..++|.+.+++
T Consensus 286 ~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a---~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 286 VGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDA---AIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCCh---HHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 88777777654433333 48999999999999999998887765 44 3334455555555555778888887
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+|+...+..+...++..+.-+
T Consensus 362 sw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 362 SWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred ChHHHHHHHHHHHHHHHHHHh
Confidence 899888887777766665443
No 201
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=2.2e-07 Score=76.73 Aligned_cols=115 Identities=18% Similarity=0.187 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhcchhhhhhhh
Q psy13786 81 QASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT--KSDLINLYISRLLSGLSVGLATTPAAVYA 158 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 158 (219)
..+.+.....+..+++.+++++++||+|+|+.+.++.++..+......+ .++.+.+++..++.|++.+...+..++++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667788889999999999999999998887666543332222 35666677788899999999999999999
Q ss_pred hhccCCCC---c-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 159 AECITIHN---T-DLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 159 ~~~~~~~~---~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+|..+.+| + +..|...+.++.+..+|..+++.+++.+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886432 1 1346777888888899999998888766
No 202
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.88 E-value=6.5e-08 Score=80.50 Aligned_cols=134 Identities=10% Similarity=0.094 Sum_probs=92.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhh----hhCCchhh-hHhhHHHHHHHHHHHhhh----h--HHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIID----KYGRKSAL-MITNVPSLCGWLLMATKS----D--LINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grr~~~-~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~l~G 144 (219)
|+++...|.+..+..+.-.+..|+.|+++| |+||||.+ +++.+..+++..++...+ + +..+.+...+.+
T Consensus 38 Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~ 117 (473)
T PRK10429 38 GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWG 117 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 66996554 456666666655544322 1 223444556667
Q ss_pred hhhhcchhhhhhhhhhccC-CCCccchhhHHHHHHHHHHHHHHHHHHHhhh----h-------hhHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECIT-IHNTDLRGSLSTWSTIALTSGILLSYLTGAF----F-------WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~----~-------~w~~~~~~~~~~~~~~~ 212 (219)
++.........++..|..+ ++ +|.+..+.-.....+|+.+.+.+... . +|+....+.+++.++..
T Consensus 118 ~~~t~~~ip~~al~~~lt~~~~---eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~ 194 (473)
T PRK10429 118 MTYTIMDIPFWSLVPTLTLDKR---EREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST 194 (473)
T ss_pred HHHHHHcchHHhhhHHhCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 7777778888899999984 66 89998887666666665554433221 1 45655555555544433
No 203
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.86 E-value=1e-08 Score=84.12 Aligned_cols=139 Identities=20% Similarity=0.272 Sum_probs=106.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhh----hhCCchhhh-HhhHHHHHHHHHHHhh-h-------hHHHHHHHHHH
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIID----KYGRKSALM-ITNVPSLCGWLLMATK-S-------DLINLYISRLL 142 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grr~~~~-~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~l 142 (219)
|+++...+.+..+..+...+..|+.|.++| |+||||..+ ++.+...++.+++... + ....+.+..++
T Consensus 33 gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l 112 (428)
T PF13347_consen 33 GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYIL 112 (428)
T ss_pred CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999 899887766 5777777777776654 3 12234566667
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHH
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLS 211 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~ 211 (219)
..++.........++..|..+++| +|.+..+....+..+|..+...+...+ +|++...+.+++.++.
T Consensus 113 ~~~~~t~~~i~~~al~~~lt~~~~--~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~ 190 (428)
T PF13347_consen 113 FDIAYTFVQIPYNALIPELTPDPD--ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVF 190 (428)
T ss_pred HHHhhhhccCchhhcCccccccHh--hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHH
Confidence 788888888888999999998531 899999988888888886555444433 4788777777776666
Q ss_pred HHHHH
Q psy13786 212 LVLVA 216 (219)
Q Consensus 212 ~~~~~ 216 (219)
.+...
T Consensus 191 ~~i~~ 195 (428)
T PF13347_consen 191 FLITF 195 (428)
T ss_pred hhhhh
Confidence 55544
No 204
>KOG3764|consensus
Probab=98.85 E-value=1e-08 Score=81.00 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=117.0
Q ss_pred ccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC--CchhhhHhhHHHHHHHHHHHhhhhHHHHH
Q psy13786 64 FGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDKYG--RKSALMITNVPSLCGWLLMATKSDLINLY 137 (219)
Q Consensus 64 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (219)
....-|.++.+. ..+.++.|...--..+.+.++..+.|.++||++ |-.....+.+..+.++....+++++..++
T Consensus 286 lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~ 365 (464)
T KOG3764|consen 286 LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLW 365 (464)
T ss_pred HHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHh
Confidence 333344444433 544568888888889999999999999999999 54455556666667777778899999999
Q ss_pred HHHHHHhhhhhcchhhhhhhhhhccCCCCc---cchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHH
Q psy13786 138 ISRLLSGLSVGLATTPAAVYAAECITIHNT---DLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFL 210 (219)
Q Consensus 138 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 210 (219)
+-++..|++.+...+.......+....+.. ...|...++...++++|..+||.+++.+ |++|...+.++..++
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLI 445 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHH
Confidence 999999998888887777777777655421 1346788899999999999999999988 889988888887776
Q ss_pred HHHHH
Q psy13786 211 SLVLV 215 (219)
Q Consensus 211 ~~~~~ 215 (219)
...+.
T Consensus 446 yapvl 450 (464)
T KOG3764|consen 446 YAPVL 450 (464)
T ss_pred HHHHH
Confidence 65443
No 205
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=4.8e-07 Score=73.98 Aligned_cols=120 Identities=17% Similarity=0.224 Sum_probs=99.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKS--DLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|.++............+.+++.++..++.+|+|+|+++.++.++..++....-+.+ +.+.+++...+.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 66777777888888888888899999999999999999999999999988887754 7788888889999999999999
Q ss_pred hhhhhhhccCCCC---c-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 154 AAVYAAECITIHN---T-DLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 154 ~~~~~~~~~~~~~---~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+++++|...-.| + +.-|...+.+....-+|..++..+.++.
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999886655 2 2336777788888878877777665554
No 206
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.83 E-value=3e-07 Score=74.55 Aligned_cols=116 Identities=14% Similarity=0.016 Sum_probs=87.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhh-HHHHHHHHHHHh--hhhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITN-VPSLCGWLLMAT--KSDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|.++.+.++......++..+++.+.+++.||++++....... ....+....... ..+.+.+.....+.|++.+...+
T Consensus 239 g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 239 GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFP 318 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 888889999988889999999999999999998433322222 122122122222 23556667778899999998889
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
....+..|..| + ++++..++.+....+|..+++.+++..
T Consensus 319 ~~~~~~~~~~~-~---~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 319 LATSGAMEPFP-Y---LAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHhhcc-c---cchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999887 4 589999999999999999999988877
No 207
>PRK11462 putative transporter; Provisional
Probab=98.80 E-value=2.6e-07 Score=76.70 Aligned_cols=135 Identities=17% Similarity=0.146 Sum_probs=98.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchhhh-HhhHHHHHHHHHHHhhhh------HHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSALM-ITNVPSLCGWLLMATKSD------LINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G 144 (219)
|+++...|.+..+.-+.-.+.-|+.|+++|| +||||+.+ ++.+..+++..++...++ ...+.+.-.+..
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~ 120 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT 120 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999995 79887666 466677766665544332 233444556667
Q ss_pred hhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~~ 212 (219)
++.........++..|..++.+ +|.+..++-..+..+|..+++.+...+ +|+....+.+++.++..
T Consensus 121 ~~~t~~~ipy~al~~~lt~d~~--eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 121 LLYTVVNIPYCALGGVITNDPT--QRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHhccHHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 7788888888899999987532 899999998888888877766554332 46655555555544443
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.80 E-value=7.7e-08 Score=79.92 Aligned_cols=117 Identities=12% Similarity=0.008 Sum_probs=100.6
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh----------hhhHHHHHHHHHHHhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT----------KSDLINLYISRLLSGL 145 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~G~ 145 (219)
|.++.+.|.......++.+++....+++.+|++.|+++.++.++..++...... .++.+.+....++.++
T Consensus 284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~ 363 (468)
T TIGR00788 284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEV 363 (468)
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHH
Confidence 999999999999999999999999999999999999999999888887755321 1333344556778888
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+.+........++.+..|++ .+|+..++.+...++|..+++.+++.+
T Consensus 364 ~~g~~~~~~~~~~~~~~p~~---~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 364 LAQLKFMPFLVLLARLCPSG---CESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHccHHHHHHHhCCCC---ceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999 999999999999999999999888877
No 209
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.80 E-value=1.8e-07 Score=76.44 Aligned_cols=112 Identities=12% Similarity=-0.014 Sum_probs=85.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 78 TIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
+....+...+....+..+|.++++++.||+++|+++.+..++..+..++....++... ...-++.|++.+..+|...+.
T Consensus 267 ~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl 345 (410)
T TIGR00885 267 TAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGI 345 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666666788899999999999999999999988888888888877766544 456677888888888999999
Q ss_pred hhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 158 AAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 158 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
..+..+++ .+....++.. . .+|+.+.|++.+.+
T Consensus 346 ~~~~~g~~---~~~~s~~l~~-~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 346 ALKGLGQD---TKYGAAGLVM-A-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHhhhhhh---hhhhHHHHHH-H-HhccchHHHHHHHH
Confidence 99999876 4433333333 2 28899999888877
No 210
>KOG3762|consensus
Probab=98.79 E-value=2.4e-08 Score=81.72 Aligned_cols=138 Identities=16% Similarity=0.107 Sum_probs=119.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
+-.+.--|........+-+..-++.+++.+|+|+-+++..+..+..+=.+..+..+|.|..+...+++|+..+..+....
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~ 481 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAII 481 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHH
Confidence 44455556667777788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHH-HHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTW-STIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+|+++..||+ .|.++.++ .....++|-.+|.++++.+ +-|..|.+.++.+++.+++..
T Consensus 482 sY~s~vaPp~---l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 482 SYASHVAPPG---LRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHhhCCCc---chHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999995 5566688888888888877 778888888888777766543
No 211
>KOG0252|consensus
Probab=98.79 E-value=9.3e-09 Score=82.63 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=91.1
Q ss_pred HHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhh----HHHHHHHH-HHHhhhhhcchhhhhhhhhhccCCCCccc
Q psy13786 95 IGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSD----LINLYISR-LLSGLSVGLATTPAAVYAAECITIHNTDL 169 (219)
Q Consensus 95 ~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~l~G~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (219)
.|..+..++.|++|||+..+-+.+++.+..+..+...| -..+.+.- +.+-++.-+.....-.+.+|.+|.+ .
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar---v 439 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR---V 439 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH---H
Confidence 35666778899999999999999999999888887655 11222221 2222233344566677889999999 9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 170 RGSLSTWSTIALTSGILLSYLTGAFF---------WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 170 r~~~~~~~~~~~~~g~~~~~~~~~~~---------~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
|++..|+..++.-.|.+++......+ +.++++++.+.+..+..+..++
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 99999999999999999998777665 6788999998888887765543
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.79 E-value=4.2e-07 Score=78.07 Aligned_cols=141 Identities=13% Similarity=0.174 Sum_probs=112.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhhhh--------HHHHHHHHHHHhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATKSD--------LINLYISRLLSGLS 146 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~G~~ 146 (219)
|.+..++..+...+....-+...++|+++|+ +||++.+.++.++..++..+.++... ....+++..+...|
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G 98 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG 98 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh
Confidence 7888888888888888888888999999995 79999999999999999888776321 23356677888889
Q ss_pred hhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHHHHHH
Q psy13786 147 VGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~~~~~ 215 (219)
.|+.-+...+...|.+++++.+.|-....++..+.++|+++++.+..++ +|...|.+.++..+++.+..
T Consensus 99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999765211367778888899999999998887766 27778888877777766554
Q ss_pred H
Q psy13786 216 A 216 (219)
Q Consensus 216 ~ 216 (219)
.
T Consensus 179 ~ 179 (654)
T TIGR00926 179 M 179 (654)
T ss_pred H
Confidence 3
No 213
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.78 E-value=9.1e-08 Score=77.20 Aligned_cols=143 Identities=17% Similarity=0.160 Sum_probs=81.3
Q ss_pred cccchhhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH--HHHHH-Hh----hhhHH-HHHH
Q psy13786 67 PAVALPQMSYLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC--GWLLM-AT----KSDLI-NLYI 138 (219)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~--~~~~~-~~----~~~~~-~~~~ 138 (219)
...++.+..|++++++|.+.++..+...+.+|+.|.++||+|.||.+++......+ +.+.. .+ ..|.+ ..++
T Consensus 30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~ii 109 (412)
T PF01306_consen 30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAII 109 (412)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHH
T ss_pred HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344332299999999999999999999999999999999988766544332221 22111 11 12322 2233
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~~~~~~~ 214 (219)
+-...|+......++.-++..+... +.+.-.|=.-+++++|..++..+++.+ +-...|++.....++..++
T Consensus 110 g~i~l~~~f~~~~~~~Ea~~er~sr-----~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 110 GGIYLGLVFNAGVPLSEAYAERVSR-----RNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLL 183 (412)
T ss_dssp TTTTTTTTTTTHHHHHHHHHHHHHH-----HHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccchHHHHHHHHHHH-----HhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHH
Confidence 3333444444444555555544432 223344445567777777777777776 4455677655554444433
No 214
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.77 E-value=5.3e-07 Score=75.33 Aligned_cols=131 Identities=16% Similarity=0.151 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchh-------hhHhhHHHHHHHHHHH-----hh-----hhHHHHHHHHHHHh
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSA-------LMITNVPSLCGWLLMA-----TK-----SDLINLYISRLLSG 144 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~-------~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~l~G 144 (219)
.+++++...+..++.+++.+++.||+++|+. +.+|.++.+++.+..+ .. .+.+.++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3566666777788889999999999999974 6777777766654321 11 34666777889999
Q ss_pred hhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--------------hhHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--------------WYTTVAYIGAFVSFL 210 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------------~w~~~~~~~~~~~~~ 210 (219)
+|.+...+....++.+..|++ .++.++++++....+|+.++..++... .+.+.|...++.+++
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~---~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 467 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQH---LMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLG 467 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999988777432 245666666655555
Q ss_pred HHHHH
Q psy13786 211 SLVLV 215 (219)
Q Consensus 211 ~~~~~ 215 (219)
..++.
T Consensus 468 ~~v~~ 472 (489)
T PRK10207 468 VAVVM 472 (489)
T ss_pred HHHHH
Confidence 44443
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.75 E-value=2.1e-07 Score=75.66 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=79.7
Q ss_pred ccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC-CchhhhHhhHHHHHHHHHHHhhhhHHHHHHH
Q psy13786 64 FGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYG-RKSALMITNVPSLCGWLLMATKSDLINLYIS 139 (219)
Q Consensus 64 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (219)
.+...|+++.+. |+|..|+|.+.+...+..+++++++|+++||.+ +||.+.+..++.++........++++.+...
T Consensus 18 ~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~ 97 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVI 97 (400)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 333445555554 999999999999999999999999999999986 5677777777777766667778888888888
Q ss_pred HHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 140 RLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 140 ~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
.++..+......|...++..+...+
T Consensus 98 ~~l~~~~~~p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 98 MLLFSFFFSPTMPLSDSIALSYLGD 122 (400)
T ss_pred HHHHHHHHccHHHHHHHHHHHHccc
Confidence 8888887777777777777777653
No 216
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.68 E-value=9.6e-11 Score=96.59 Aligned_cols=127 Identities=19% Similarity=0.141 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH--h---hhh-----HHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 87 SISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA--T---KSD-----LINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 87 ~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~--~---~~~-----~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
....+...++.+...++.||+|||+.++.+.....++.+..+ . .++ ...+............+..+..+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~ 372 (451)
T PF00083_consen 293 LILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWI 372 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 344455666777777999999999999999888887777664 1 121 222222221111112234566778
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
+..|.+|.+ .|+++.++......+++.+++.+.... +-...+.+.+.++++..+..+
T Consensus 373 ~~~ElfPt~---~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~ 433 (451)
T PF00083_consen 373 YTAELFPTK---VRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVY 433 (451)
T ss_pred ccccccccc---ccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhee
Confidence 999999999 999999998888888888888776665 212345555555555554443
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.68 E-value=9.6e-07 Score=72.24 Aligned_cols=139 Identities=22% Similarity=0.253 Sum_probs=106.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchhhh-HhhHHHHHHHHHHHhhhh------HHHHHHHHHHHh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSALM-ITNVPSLCGWLLMATKSD------LINLYISRLLSG 144 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G 144 (219)
|+++..+|.+..+.-+--++.-|+.|.+.|| +||||+.+ ++.+..++.+.++-.+++ ..-..+.-.+.+
T Consensus 44 Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~ 123 (467)
T COG2211 44 GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLG 123 (467)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999995 78876655 566777777777766552 334455678888
Q ss_pred hhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHHHHHH
Q psy13786 145 LSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------WYTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------~w~~~~~~~~~~~~~~~~ 213 (219)
++.........++.+|+.++.+ +|.+..++-..+..+|.++...+...+ ||+....+.+++.++..+
T Consensus 124 l~YT~vniPy~al~~~iT~d~~--ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l 201 (467)
T COG2211 124 LGYTLVNIPYGALGPEITQDPQ--ERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLL 201 (467)
T ss_pred HHHHheeCchhhcchhhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 8888888888899999986642 899999998888888877665555443 677666666666655555
Q ss_pred HHH
Q psy13786 214 LVA 216 (219)
Q Consensus 214 ~~~ 216 (219)
..+
T Consensus 202 ~~~ 204 (467)
T COG2211 202 FCF 204 (467)
T ss_pred HHH
Confidence 444
No 218
>PRK11462 putative transporter; Provisional
Probab=98.66 E-value=4e-06 Score=69.67 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
...+.+.....++.+++.+++++++||+|+|+.+..+.....+..++..+. ++...+.+.-++.|++.+...+..+++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888899999999999999999998775554444433333232 223334445566777777766766778
Q ss_pred hhhccCCCC---cc-chhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 158 AAECITIHN---TD-LRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 158 ~~~~~~~~~---~~-~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+.|..+.+| ++ +.|...+.......+|..+++.+.+.+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887766322 11 234545666677777777777666654
No 219
>KOG0254|consensus
Probab=98.65 E-value=2.1e-06 Score=72.22 Aligned_cols=165 Identities=15% Similarity=0.078 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 43 LFRLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
.+++......+.......+ ......+.+++. |.+... .+......+...++..+..++.||+|||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG--~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTG--INYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhC--CceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHH
Confidence 3444444444433333333 333334444444 555443 5566666777778888889999999999999999999
Q ss_pred HHHHHHHHHhhhh-------------HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHH
Q psy13786 120 SLCGWLLMATKSD-------------LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGIL 186 (219)
Q Consensus 120 ~~~~~~~~~~~~~-------------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 186 (219)
+.++.++.+.... ...+...-+.......+..++.+.+.+|.+|.+ .|+++.++......+...
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~---~r~~~~s~~~~~n~~~~~ 445 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLR---LRSKGASLAVAVNWLWNF 445 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHh---HHhhhHHHHHHHHHHHHH
Confidence 9999888775311 122222233333333445577778999999999 999999987777766665
Q ss_pred HHHHHhhhh-h---hHHHHHHHHHHHHHHHH
Q psy13786 187 LSYLTGAFF-W---YTTVAYIGAFVSFLSLV 213 (219)
Q Consensus 187 ~~~~~~~~~-~---w~~~~~~~~~~~~~~~~ 213 (219)
+-....... . +...|...+..+.+...
T Consensus 446 ~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 446 LISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 543333333 2 24455555555555544
No 220
>KOG2816|consensus
Probab=98.63 E-value=1.6e-06 Score=71.51 Aligned_cols=122 Identities=21% Similarity=0.269 Sum_probs=95.5
Q ss_pred HHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhh--hhcchhhhhhhhhhccCCC
Q psy13786 88 ISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLS--VGLATTPAAVYAAECITIH 165 (219)
Q Consensus 88 ~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~--~~~~~~~~~~~~~~~~~~~ 165 (219)
...+...+.++..|.++||+|||..+....+...+..+...+.. +|.+. +.++. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 44677888999999999999999999998888877777666655 33333 33332 2345677788999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 166 NTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 166 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+|....++.+.....+..++|.+++.. +.-.++.+..+..++..+...+
T Consensus 145 ---~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~ 197 (463)
T KOG2816|consen 145 ---ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLL 197 (463)
T ss_pred ---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999987 6667777777777766665544
No 221
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.61 E-value=1.9e-06 Score=71.38 Aligned_cols=134 Identities=12% Similarity=0.068 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHhhHhHhhhhhCC-chhhhHhhHHHHHHHHHHHhhhh---------------------HHHHHHHHH
Q psy13786 84 WFASISAITMPIGCLLSGPIIDKYGR-KSALMITNVPSLCGWLLMATKSD---------------------LINLYISRL 141 (219)
Q Consensus 84 ~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~ 141 (219)
+....+.+...+.+++..++.+|+|+ |++..++.++.+++.....+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44555566666777888899999995 66768888888877777665432 266777788
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHH
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~ 215 (219)
+.|+..+..+..-++++++..+++ ++..|..+|+.|.+..+.+.+..+..+.. +-.+.+.+.++..+++.++.
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~-~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNL-GAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHcccc-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999954 01459999999999999999888766654 34567788888888877776
Q ss_pred Hhh
Q psy13786 216 AMI 218 (219)
Q Consensus 216 ~~~ 218 (219)
++.
T Consensus 468 ~~~ 470 (477)
T TIGR01301 468 LIL 470 (477)
T ss_pred HHh
Confidence 654
No 222
>PRK09848 glucuronide transporter; Provisional
Probab=98.56 E-value=3e-06 Score=70.10 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=77.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhh----CCchhh-hHhhHHHHHHHHHH-Hhh----hh--HHHHHHHHHHH
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKY----GRKSAL-MITNVPSLCGWLLM-ATK----SD--LINLYISRLLS 143 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----Grr~~~-~~~~~~~~~~~~~~-~~~----~~--~~~~~~~~~l~ 143 (219)
|+++.+.|.+.+...+...+..++.|+++||. ||||.. .++.+...+...+. ... ++ .....+...+.
T Consensus 40 gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (448)
T PRK09848 40 GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGL 119 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999986 777765 45555444433332 211 11 22233445667
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHH-----HHHHHHHHHHHhhh
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIA-----LTSGILLSYLTGAF 194 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-----~~~g~~~~~~~~~~ 194 (219)
+++.+...+...++..|..++.+ +|.+..+.-..+ ..++..++|.+...
T Consensus 120 ~~~~~~~~~~~~al~~~~~~~~~--~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 120 GLCYSLVNIPYGSLATAMTQQPQ--SRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHhcccHhhhhhhhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777777777777777765531 688776655433 23455566666543
No 223
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.52 E-value=3.5e-06 Score=59.17 Aligned_cols=112 Identities=17% Similarity=0.168 Sum_probs=90.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 78 TIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
++..-..-.++......+.+++.+.+.+++|.|+.++++.+...+-.... +-++.+.++..-.+.|++.+..++....+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 33333445566677788888888999999999999999998888655443 45667888899999999999999999999
Q ss_pred hhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 158 AAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 158 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
+.+..+++ .|++..++.-.....+.+.|.++..
T Consensus 114 lt~~s~~~---~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 114 LTSYSTEE---TIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHcCCHH---HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 8999999877777777777765544
No 224
>KOG0637|consensus
Probab=98.49 E-value=2e-07 Score=75.00 Aligned_cols=137 Identities=12% Similarity=0.174 Sum_probs=99.4
Q ss_pred hhhhhccccccccchhhcccCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchhhhHh-hHHHHHHHHHHHhhh
Q psy13786 57 GVAPGMSFGFPAVALPQMSYLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSALMIT-NVPSLCGWLLMATKS 131 (219)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~~~~~-~~~~~~~~~~~~~~~ 131 (219)
.+......+...|++... |.+....+.+...-.+...+-+|+.|..+|| |||||.++.. ....+++.++..+++
T Consensus 45 qf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aa 123 (498)
T KOG0637|consen 45 QFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAA 123 (498)
T ss_pred HHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHh
Confidence 344444444444444444 9999888888888888999999999999995 8999988875 455556666666644
Q ss_pred hHH-----------------HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhh-HHHHHHHHHHHHHHHHHHHhh
Q psy13786 132 DLI-----------------NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGS-LSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 132 ~~~-----------------~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~~~~~~~ 193 (219)
++. .++++.-+.=+.....+..+-+++.|....+ ++.+ +++.+.....+|+.+|..++.
T Consensus 124 Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d---~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 124 DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGD---AKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccCh---hhhhccchhHHHHHHhcceeeeeccc
Confidence 322 3334444445555567788889999999887 6666 999999999999999988887
Q ss_pred hhhh
Q psy13786 194 FFWY 197 (219)
Q Consensus 194 ~~~w 197 (219)
+.+|
T Consensus 201 y~~~ 204 (498)
T KOG0637|consen 201 YLGL 204 (498)
T ss_pred ccCc
Confidence 7644
No 225
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.45 E-value=4.6e-06 Score=70.57 Aligned_cols=132 Identities=18% Similarity=0.152 Sum_probs=94.2
Q ss_pred hhhhccccccccchhhcc----cCCh---hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCch-hhhHhhHHHHHHHHHHHh
Q psy13786 58 VAPGMSFGFPAVALPQMS----YLTI---DQASWFASISAITMPIGCLLSGPIIDKYGRKS-ALMITNVPSLCGWLLMAT 129 (219)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~-~~~~~~~~~~~~~~~~~~ 129 (219)
+..++.......+.|+.. +.++ .+.++......++..+++.+.|.+..+++|-| .++++.+++.+++-+++.
T Consensus 320 fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~ 399 (599)
T PF06609_consen 320 FISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA 399 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH
Confidence 334444333344555543 3333 35778888899999999999999998888754 445676666655444443
Q ss_pred --hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy13786 130 --KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTG 192 (219)
Q Consensus 130 --~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 192 (219)
.+|....+...++.|++.|...........-..|++ +-+++.++......+|+.++.-+.
T Consensus 400 ~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~---~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 400 VRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE---DIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred ccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch---HHHHHHHHHHHHHHHhhHHHHHHH
Confidence 345556677788999999988777777777778888 899999999988888888877664
No 226
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.43 E-value=3.9e-08 Score=82.68 Aligned_cols=135 Identities=18% Similarity=0.125 Sum_probs=3.0
Q ss_pred hhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh----
Q psy13786 58 VAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK---- 130 (219)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~---- 130 (219)
+.+....+.....+.++. +++..+.|++.+.+-++..+..++..++.+|..|-|.+-++.++++++++++++-
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 334444555555566665 9999999999999999999999999999999877788888999999998887640
Q ss_pred h----------------------------------------------hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 131 S----------------------------------------------DLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 131 ~----------------------------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
. -+..++++.++.|+|....++...+|+-|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 0 023677789999999999999999999999999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 165 HNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 165 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+ +-+..+|+......+|..+|..+++..
T Consensus 173 ~---~splYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 173 K---NSPLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp -------------------------------
T ss_pred c---cCccchhhhhHHhhccHHHHHHHHHHH
Confidence 9 889999999988888888887777654
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.42 E-value=9.1e-06 Score=64.79 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=93.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|.+..+.....+.+..+..+|..+..++..|+...|.+....++..+.++...+.++...+ .+-++.|+..+..+|...
T Consensus 268 g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTIf 346 (422)
T COG0738 268 GLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIF 346 (422)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHH
Confidence 8889999999999999999999999999999999999999998888888888888885543 446788889999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+...+..|.+ -..+.+ .-....+|+.+.|.+.+++
T Consensus 347 slal~~l~~~----ts~~s~-~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 347 SLALKNLGEH----TSVGSG-LLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHHhccCcc----ccccce-eeeeheecchHHHHHHHHH
Confidence 9999999944 333333 3333456777788888877
No 228
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.40 E-value=8.6e-07 Score=55.17 Aligned_cols=76 Identities=21% Similarity=0.214 Sum_probs=66.4
Q ss_pred hccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHH
Q psy13786 61 GMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINL 136 (219)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (219)
|.....+.+.+|.+. ++|.++.+++.+...+|+.+|++...++.++..+++.+..+.+...+..+.+++.++.+.+
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 334455678888887 8999999999999999999999999999999888899999999999999999998887654
No 229
>KOG4686|consensus
Probab=98.40 E-value=7.6e-08 Score=73.18 Aligned_cols=148 Identities=14% Similarity=0.200 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHH
Q psy13786 45 RLIYLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPS 120 (219)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~ 120 (219)
+|......+++..+...+..-.......++. +++.++..++.+.++.-.++-+.++|++.|| +|-|..-++-+++.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 3444444444444443333333333333333 6667788889999999999999999999996 67776666555555
Q ss_pred HHHHHHHHh---hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 121 LCGWLLMAT---KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 121 ~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.++-++++. .+.+|....+|++.|+|.-......+.|...++..| +-+.++|+......+|+..--.+.+++
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK---ELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK---ELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCc---cccchhhHHHHHHHhhceeeeeecHHH
Confidence 666665553 689999999999999998777788889999999999 899999998888888877654444433
No 230
>KOG3626|consensus
Probab=98.39 E-value=2.4e-06 Score=73.12 Aligned_cols=168 Identities=16% Similarity=0.130 Sum_probs=136.0
Q ss_pred HHHHHHHHhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHH
Q psy13786 48 YLGLIVILPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGW 124 (219)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~ 124 (219)
..+.++.+..+.+++...++...+.++. +++..+.|++.+.+-++..+...+..+..-|..|-|.+-++.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 3444555555666666555555555555 8999999999999999999999999999999999899999999999999
Q ss_pred HHHHhh--------------------h---------------------------h----HH-HHHHHHHHHhhhhhcchh
Q psy13786 125 LLMATK--------------------S---------------------------D----LI-NLYISRLLSGLSVGLATT 152 (219)
Q Consensus 125 ~~~~~~--------------------~---------------------------~----~~-~~~~~~~l~G~~~~~~~~ 152 (219)
+++++- + + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 987741 0 0 22 456678999999999999
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----------------------hhHHHHHHHHHHHH
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----------------------WYTTVAYIGAFVSF 209 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----------------------~w~~~~~~~~~~~~ 209 (219)
...+|+-|...++ +-...+|+......+|-.+|-++++.. .|+.-|++.+.+.+
T Consensus 257 lGisYiDDnvk~~---~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 257 LGISYIDDNVKKK---NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CCCcccccccccc---CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 9999999999999 899999999999988888888887765 57677888888877
Q ss_pred HHHHHHHhh
Q psy13786 210 LSLVLVAMI 218 (219)
Q Consensus 210 ~~~~~~~~~ 218 (219)
+..+.++++
T Consensus 334 ~~a~p~f~f 342 (735)
T KOG3626|consen 334 FSAVPLFFF 342 (735)
T ss_pred HHHHHHHhC
Confidence 777766654
No 231
>KOG2615|consensus
Probab=98.34 E-value=4e-06 Score=66.36 Aligned_cols=117 Identities=17% Similarity=0.140 Sum_probs=99.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC--CchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYG--RKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTP 153 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 153 (219)
|+++.|.|.+.+...+.+.+.+....+..||.. -+-.+..+..+..-..++.+.+.....+.++..+-.+..+..-+-
T Consensus 293 g~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~ 372 (451)
T KOG2615|consen 293 GYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTC 372 (451)
T ss_pred CCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHH
Confidence 899999999999999999998888888888876 566666666666666666777888888888888888887777777
Q ss_pred hhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 154 AAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
...++....|.+ +||..+|+......++-.+||.+++..
T Consensus 373 Lt~Lv~~~~~~~---qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 373 LTSLVHKYGPQS---QRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred HHHHHHhcCCcc---cchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 788888899999 999999999999999999999999776
No 232
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.33 E-value=6.7e-05 Score=61.47 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=80.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH-----hhhhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA-----TKSDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.++.+.++.......+..++..+.+++.++.++++.......+..++..+.. ..++++..++..++.++|.+..
T Consensus 250 g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~ 329 (413)
T PRK15403 250 GMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLI 329 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
Confidence 88999999998888888888888888876544444443222222222222222 1233434566778888888877
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHH
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF---WYTTVAYIGAFVS 208 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~---~w~~~~~~~~~~~ 208 (219)
.+......- ..... .+|++.++.+.....+...++..++++ +-++.+....+.+
T Consensus 330 ~p~~~~~al-~~~~~---~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 386 (413)
T PRK15403 330 FPTLFRFTL-FSNNL---PKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVA 386 (413)
T ss_pred hHHHHHHHh-ccCCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 766664332 22333 578888888888877777777777766 3344444444333
No 233
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.31 E-value=2.3e-06 Score=52.64 Aligned_cols=55 Identities=20% Similarity=0.272 Sum_probs=45.8
Q ss_pred cccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHH
Q psy13786 65 GFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVP 119 (219)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~ 119 (219)
+...|++|.+. |+++.++|.+.++..+...++++++|.++||+++++.+......
T Consensus 17 g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 17 GCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33345555555 99999999999999999999999999999999999988765443
No 234
>KOG2533|consensus
Probab=98.25 E-value=4e-06 Score=69.73 Aligned_cols=153 Identities=12% Similarity=-0.046 Sum_probs=94.7
Q ss_pred HHHHHhhhhhhccccccccchhhcc----cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh----hCCchhhhHhhHHHHH
Q psy13786 51 LIVILPGVAPGMSFGFPAVALPQMS----YLTIDQASWFASISAITMPIGCLLSGPIIDK----YGRKSALMITNVPSLC 122 (219)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~~~~~~~~~~~ 122 (219)
....++.++.....+....++|.+. |++..+.+.+.+.+.++.+++.+++|+++|| ..+|........+...
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3334444555555555566666666 5889999999999999999999999999999 5666666655544443
Q ss_pred HH-HHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----h
Q psy13786 123 GW-LLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----W 196 (219)
Q Consensus 123 ~~-~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~ 196 (219)
.. .......+........+..+.+.....+......++....+. +|-+..+++..+.+.++..+|.+-... .
T Consensus 356 ~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~--k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~ 433 (495)
T KOG2533|consen 356 IGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT--KALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG 433 (495)
T ss_pred HHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchH--HhHHHHhhhhcchhHHHHhhhhhcccccCcchh
Confidence 33 333333333333333334444445555666777777776651 344444466777777766666554433 5
Q ss_pred hHHHHHHHH
Q psy13786 197 YTTVAYIGA 205 (219)
Q Consensus 197 w~~~~~~~~ 205 (219)
|...|....
T Consensus 434 ~~~~f~~~~ 442 (495)
T KOG2533|consen 434 WGAVFYMLV 442 (495)
T ss_pred hhhHHHHHH
Confidence 666664433
No 235
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.22 E-value=1.3e-05 Score=63.15 Aligned_cols=84 Identities=12% Similarity=-0.002 Sum_probs=72.0
Q ss_pred HhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh------------
Q psy13786 128 ATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------------ 195 (219)
Q Consensus 128 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------ 195 (219)
+...++..+++..++.|.|.+...+..++++++..|++ ++++.+++.+.++++|.+++|.+++.+
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~---~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIE---TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc---hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 34678999999999999999999999999999999999 899999999999999999999999854
Q ss_pred --------hhHHHHHHHHHHHHHHHHH
Q psy13786 196 --------WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 196 --------~w~~~~~~~~~~~~~~~~~ 214 (219)
+|++++++.+.+.++..+.
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3788888666554444443
No 236
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.21 E-value=0.00029 Score=57.04 Aligned_cols=138 Identities=15% Similarity=0.228 Sum_probs=108.3
Q ss_pred cCChhhHH-HHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQAS-WFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|++..|.. -+.-...-.+.+..++...+.|..+.|++++++.+...+...+..+.++...+-+..++.|++.+. ..+.
T Consensus 36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay 114 (412)
T PF01770_consen 36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAY 114 (412)
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHH
Confidence 67776654 344455556677778889999999999999999999999999999999999999999999998764 6777
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF------WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
++|+-...|++ +-.++.+....+.-+|.+++..++..+ +++...++......++++..++
T Consensus 115 ~sYiys~v~~~---~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 115 YSYIYSVVDKE---HYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHheeecCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88998888998 888889888888888888887777766 5666656555544444444433
No 237
>KOG2816|consensus
Probab=98.19 E-value=7.9e-05 Score=61.68 Aligned_cols=116 Identities=14% Similarity=0.063 Sum_probs=103.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHh-HhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSG-PIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
++++.+.+...+.......+++.+.. .+...+|-|+.+..|.....+.....+++++.|+.+....+.++. ....+..
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa~ 351 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPAI 351 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHHH
Confidence 99999999999999988888887766 778889999999999999999999999999999988888777765 4567888
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.+..+.+..++ ++|+..++......+...++|.+-+.+
T Consensus 352 ~s~~s~~v~~~---e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 352 RAFASILVSPE---EQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HhHHHhhcccc---cccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 99999999999 999999999999999999998887766
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.18 E-value=0.00016 Score=60.34 Aligned_cols=111 Identities=11% Similarity=0.063 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCC--ch-----hhhHhhHHHHHHHHHHHhh---------hhHHHHHHHHHHHhh
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGR--KS-----ALMITNVPSLCGWLLMATK---------SDLINLYISRLLSGL 145 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Gr--r~-----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~ 145 (219)
.+|.++...+..++.+|+.+++-.|.+| |. =+.++.++.+++.+....+ .+.+.+++.-++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5788889999888899988888777633 21 1567777777777665431 256667888899999
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHH-HHHHHHHHHHHhhhh
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIA-LTSGILLSYLTGAFF 195 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~~ 195 (219)
|.-...|+..+.+++..|++ .||..+|.+... ..+|..++..++...
T Consensus 390 gEl~~sPvgls~~~~laP~~---~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPG---VTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 999999988663 367777666655433
No 239
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.17 E-value=2.5e-05 Score=64.43 Aligned_cols=138 Identities=20% Similarity=0.198 Sum_probs=102.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC-----CchhhhHhhHHHHHHHHHHHhh----hhHHHHHHHHHHHhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYG-----RKSALMITNVPSLCGWLLMATK----SDLINLYISRLLSGLS 146 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~ 146 (219)
|+++++.....+...+...+ .++.|.++|.+. ||+.++++.++..++....+.. .+.....+..++..++
T Consensus 21 ~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g 99 (433)
T PF03092_consen 21 GLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFG 99 (433)
T ss_pred CCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHH
Confidence 99999988888887777654 578999999863 4555566776665555555542 3456666677888888
Q ss_pred hhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHH
Q psy13786 147 VGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLV 215 (219)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~ 215 (219)
.........+++.|....+.. .||...+....+..+|++++..+.+.+ +++..|.+.+++..+..+..
T Consensus 100 ~a~~DV~aDa~vvE~~~~~p~-~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~ 171 (433)
T PF03092_consen 100 YAFADVAADALVVELARREPE-SRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVA 171 (433)
T ss_pred HHHHHHhhhHHHHHHhhcCCc-hhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHH
Confidence 888999999999999855421 377888888888899999998888877 77777877776666655443
No 240
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.12 E-value=3.3e-05 Score=62.38 Aligned_cols=106 Identities=18% Similarity=0.233 Sum_probs=84.8
Q ss_pred hhhhHhhHHHHHHHHHHHhhh---------hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHH
Q psy13786 111 SALMITNVPSLCGWLLMATKS---------DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIAL 181 (219)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 181 (219)
|++.++.+++.++.++...+. +...++++..+.++|.|+.-+...++.+|.+++++..+|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567788888888888854431 23578888999999999999999999999998763336778888999999
Q ss_pred HHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 182 TSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 182 ~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
++|..+++.+..++ +|.+.|.+.++..+++++.++
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 99999999988888 899999998888777766554
No 241
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.06 E-value=0.0004 Score=57.96 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhh-HHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 81 QASWFASISAITMPIGCLLSGPIIDKYGRKSALMITN-VPSLCGWLLMATK--SDLINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
..++..++..+...+..|+.|.++|+-|+||.++... .+..+++.++.+. ++++...+..++.-++.+......+++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888999999999999999999888776544 3444455555552 334444445556666777778888999
Q ss_pred hhhccCCCCccch--------------------------hhHHHHHHHHHHHHHHHHHHHhhhh------------hhHH
Q psy13786 158 AAECITIHNTDLR--------------------------GSLSTWSTIALTSGILLSYLTGAFF------------WYTT 199 (219)
Q Consensus 158 ~~~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~------------~w~~ 199 (219)
+.|+.+++ .+ ++..+.-.....+|+.+.-.+...+ +.|.
T Consensus 151 LP~la~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 151 LPDLARPE---PRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred hHhhcCCC---hhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 99999998 77 7887777777777777665554443 2466
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13786 200 VAYIGAFVSFLSLVLV 215 (219)
Q Consensus 200 ~~~~~~~~~~~~~~~~ 215 (219)
.+.+.++.-++..+..
T Consensus 228 ~~~~~a~ww~vfsiP~ 243 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPL 243 (477)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777666655544443
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.00 E-value=0.00017 Score=58.28 Aligned_cols=113 Identities=19% Similarity=0.128 Sum_probs=81.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 78 TIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA---TKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
..++..+....+.+|-.++.--...+ |+.|.+.+.+-.++..+..++.+ +.++.+.+++.-+.-|+..|..+...
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 35677888888988877776543222 33222222222233333333322 35788888888999999999999999
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
...+.|..|++ +|...++....+-..|..++.+++-.+
T Consensus 357 F~~I~~~~~~~---~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 357 FYRISEEVPPE---DREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHhcCCHH---HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999998887655
No 243
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.00 E-value=0.00062 Score=54.81 Aligned_cols=116 Identities=15% Similarity=0.068 Sum_probs=86.5
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhC-----CchhhhH-hhHHHHHHHHHHHh-----hh--------hH-H-
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYG-----RKSALMI-TNVPSLCGWLLMAT-----KS--------DL-I- 134 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rr~~~~~-~~~~~~~~~~~~~~-----~~--------~~-~- 134 (219)
+++..-.+...+...+.+. ..+.+|+.+|+.+ ||..+++ +......+..+..+ .. .+ +
T Consensus 11 ~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~ 89 (403)
T PF03209_consen 11 GVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGL 89 (403)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHH
Confidence 5555556666666655554 5789999999998 8877766 44444444444333 12 22 2
Q ss_pred -HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 135 -NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 135 -~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
...+...+.|++.+...+...+++.|..|++ +|++..++.....-+|..++..+.+.+
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~---~R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEE---RRPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh---hhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344678899999999999999999999999 999999999888889999998888876
No 244
>PTZ00207 hypothetical protein; Provisional
Probab=97.99 E-value=0.00037 Score=59.42 Aligned_cols=127 Identities=10% Similarity=0.088 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhhHhHhhhhhCCc--------hh-hhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 85 FASISAITMPIGCLLSGPIIDKYGRK--------SA-LMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~~Grr--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
..+..++++.+|.+..|+++...-+| +. +.+..+ +.++.+++.+......+++.-++.|++.|..++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 78999999999999999887222111 12 222333 555555555554436889999999999999999999
Q ss_pred hhhhhccCCCCccchhhHHHHHHHHHHHHHHHH-HHHhhhh-----------------hhHHHHHHHHHHHHHHHHHHH
Q psy13786 156 VYAAECITIHNTDLRGSLSTWSTIALTSGILLS-YLTGAFF-----------------WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 156 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~~-----------------~w~~~~~~~~~~~~~~~~~~~ 216 (219)
...+|+|. | +-|+-..+...+..+|+.+- ..+.+.. =++.+|++.+.+++.+.+...
T Consensus 475 ~i~selFg-k---~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 475 LVTRTIFA-K---DPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHhc-c---chHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 99999999 7 78888888888888887764 3444433 257888888888888877654
No 245
>KOG0255|consensus
Probab=97.95 E-value=0.00031 Score=59.35 Aligned_cols=101 Identities=22% Similarity=0.255 Sum_probs=80.8
Q ss_pred HHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHH---HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCcc
Q psy13786 92 TMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLI---NLYISRLLSGLSVGLATTPAAVYAAECITIHNTD 168 (219)
Q Consensus 92 ~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 168 (219)
.........+.+.|++|||.....+..+..++.+..+...... ...+...+..++.+..+.....+..|.+|+.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~--- 438 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV--- 438 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH---
Confidence 4445555567889999999999999999999999988865433 2444455555555666667799999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 169 LRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 169 ~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.|+.+.+..+....+|+.++|.+....
T Consensus 439 ~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 439 VRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887655
No 246
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.80 E-value=0.0028 Score=52.67 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=85.0
Q ss_pred ChhhHHHHHHHHHHHHHHH-HhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh----h---------------------
Q psy13786 78 TIDQASWFASISAITMPIG-CLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK----S--------------------- 131 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~----~--------------------- 131 (219)
+.+...++-+...+...+. .++.+++++|++|++.+.+..........++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3467888888777776666 8899999999999999988777777766665543 0
Q ss_pred ------hHHHHHHHHHHHhhhhhcchh-hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 132 ------DLINLYISRLLSGLSVGLATT-PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 132 ------~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+.|...+.-....+......+ ..+.+++|.++.+ +-.|..++...+.++|..+++.+..++
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~---qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID---EAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222233334444444444 7789999999999 888999999999999999999887765
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.66 E-value=0.0021 Score=52.81 Aligned_cols=117 Identities=15% Similarity=0.035 Sum_probs=88.1
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh---h---h----hHHHHHHHHHHHhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT---K---S----DLINLYISRLLSGL 145 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~---~---~----~~~~~~~~~~l~G~ 145 (219)
|+++...|..-+...+..+.+...+.++.+|+|..|.=.++...-..+..++.. . + +...++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888876655544443332 1 1 22334444444445
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
|.=++.-...-++.|..|++ +||...|..+...++--++...+.-..
T Consensus 369 GLW~fDL~~~qi~Qe~V~~~---~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 369 GLWSFDLAVTQIMQENVPES---ERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHhhhHHHHHhhcccCCHH---HhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55456667777889999999 999999999998888887776665544
No 248
>KOG1237|consensus
Probab=97.50 E-value=0.0057 Score=52.23 Aligned_cols=141 Identities=18% Similarity=0.110 Sum_probs=106.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhhHHHHHHHHHHHhhhh----------------------
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDK-YGRKSALMITNVPSLCGWLLMATKSD---------------------- 132 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~~~~~~~~~~~~~~~~---------------------- 132 (219)
+.+...+.-..+.+.-......+.+++++|. +||-+++.++.++..++..+......
T Consensus 69 ~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s 148 (571)
T KOG1237|consen 69 HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPS 148 (571)
T ss_pred ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcc
Confidence 6667777777888888888888999999996 58999999998888888665543211
Q ss_pred ---HHHHHHHHHHHhhhhhcchhhhhhhhhhccCC---CCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHH
Q psy13786 133 ---LINLYISRLLSGLSVGLATTPAAVYAAECITI---HNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAY 202 (219)
Q Consensus 133 ---~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~ 202 (219)
...+....-+..+|.|+.-+...++-+|.++. ++...+...+.++....+.|.+++..+..+. +|.+.|.
T Consensus 149 ~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~ 228 (571)
T KOG1237|consen 149 KLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFG 228 (571)
T ss_pred hHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeecc
Confidence 12455666778889999999999999999983 2112334677788888899998887777666 8999888
Q ss_pred HHHHHHHHHHHHHH
Q psy13786 203 IGAFVSFLSLVLVA 216 (219)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (219)
+..+..+++.++++
T Consensus 229 i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 229 IPTVLNALAILIFL 242 (571)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777766665543
No 249
>PRK03612 spermidine synthase; Provisional
Probab=97.47 E-value=0.018 Score=48.78 Aligned_cols=115 Identities=20% Similarity=0.132 Sum_probs=64.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHH---HHH-HHHH---hhhhH-HHHHHHHHHHhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSL---CGW-LLMA---TKSDL-INLYISRLLSGLSV 147 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~---~~~-~~~~---~~~~~-~~~~~~~~l~G~~~ 147 (219)
|.+....+.+.+++..|..+|+.+++++.++.-|+.. .+-..+.. ++. ++.. ..... ..+....++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999998888644322221 11111111 111 1111 11111 12233345667777
Q ss_pred hcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 148 GLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
|...|....+..+.... +-+...|-......+|+.+|.++.+++
T Consensus 125 G~~~Pl~~~~~~~~~~~----~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 125 GMEIPLLMRILQRIRDQ----HLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHhcccc----chhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 77777766655543321 134455656666666666666666655
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.39 E-value=0.012 Score=48.64 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHhHhhhhhCCc-------hhhhHhhHHHHHHHHHHHhh----------hhHHHHHHHHHHH
Q psy13786 81 QASWFASISAITMPIGCLLSGPIIDKYGRK-------SALMITNVPSLCGWLLMATK----------SDLINLYISRLLS 143 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 143 (219)
..++.++...+.-++.+++..++--|.++| .-+-++.++.+.+.++.... .+.+.++..-+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 356888888888888998888888775544 12334555555555554432 3567888889999
Q ss_pred hhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh-------h---hhHHHHHHHHHHHHHHH
Q psy13786 144 GLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAF-------F---WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 144 G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-------~---~w~~~~~~~~~~~~~~~ 212 (219)
++|.=...|+...++....|++ ..+..++++-.....|+.++..+... . .....|+..+...++..
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~---~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~ 480 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPA---LKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIG 480 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHH---HHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999888877772 2 33445555555444443
No 251
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.36 E-value=0.003 Score=51.15 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHh-hHHHHHHHHHHHhhhh--H-HHHHHHHHHHhhhhhcchhhhhh
Q psy13786 81 QASWFASISAITMPIGCLLSGPIIDKYGRKSALMIT-NVPSLCGWLLMATKSD--L-INLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~-~~~~~~~~~~~~~~~~--~-~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
..+...++..+...+-+|+.|.++|..|+||..... ..+..++..+..+.++ . +..++...+..++.........+
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 456677888888888999999999999988776654 4444455555555544 4 44455667888888888888899
Q ss_pred hhhhccCCCCccchhhHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTW 176 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~ 176 (219)
++.+..+++ +-++..+.
T Consensus 139 ~L~~~~~k~---~~~riS~l 155 (438)
T COG2270 139 MLPRLTTKD---NMGRISGL 155 (438)
T ss_pred HhhhhcCcc---ccCccccc
Confidence 999999997 55544443
No 252
>KOG4332|consensus
Probab=97.30 E-value=0.00095 Score=51.01 Aligned_cols=86 Identities=16% Similarity=0.153 Sum_probs=65.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAA 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 155 (219)
|+...+++.+...-.-...+.+.+.|-+.||-|||+.-+.-++.+.++++ .-.++.+-.++++|.+.|+..+..+....
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFE 146 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFE 146 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHH
Confidence 77788888777666666777788889999999999977665555555443 23467888999999999999988888777
Q ss_pred hh-hhhcc
Q psy13786 156 VY-AAECI 162 (219)
Q Consensus 156 ~~-~~~~~ 162 (219)
++ +.|..
T Consensus 147 sWliaEHn 154 (454)
T KOG4332|consen 147 SWLIAEHN 154 (454)
T ss_pred HHHHHHhh
Confidence 65 44443
No 253
>KOG1330|consensus
Probab=97.15 E-value=0.0034 Score=51.40 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=69.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCC-------chhhhHhhHHHHHHH----HHHHh-hhhHHHHHHHHHHH
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGR-------KSALMITNVPSLCGW----LLMAT-KSDLINLYISRLLS 143 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-------r~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~ 143 (219)
|.+..+..+...+...+..+|.+.+|.++||+-| .+.=.....+.+... .+... ..+...+.+..++.
T Consensus 279 ~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~ 358 (493)
T KOG1330|consen 279 GFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLV 358 (493)
T ss_pred CCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 6677777778888889999999999999999432 111111111111111 11111 22222333344555
Q ss_pred hhhhhc-chhhhhhhhhhccCCCCccchhhHHHHHHHHHHH-HHHHHHHHhhhh
Q psy13786 144 GLSVGL-ATTPAAVYAAECITIHNTDLRGSLSTWSTIALTS-GILLSYLTGAFF 195 (219)
Q Consensus 144 G~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~ 195 (219)
|..... ..........|+.|++ +|.++.++......+ |..-+|.+.+.+
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~---~Rt~a~a~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPS---RRTTAYALDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred HHHHHhcccccccceeeEecCcc---cccHHHHHHHHHHHHhccCCCcceehhH
Confidence 554333 3455566788999999 999999987665544 555555455555
No 254
>KOG3098|consensus
Probab=97.08 E-value=0.0054 Score=50.67 Aligned_cols=107 Identities=19% Similarity=0.092 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 85 FASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
.+++......+.+++.+.+.|+.|.|..++++..++....+.+-+.+ -+-++....+.|+|.+..+...-.|++|..++
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~ 133 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTR 133 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCCh
Confidence 37778888889999999999999999999999999887776665544 55678889999999999999999999999999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 165 HNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 165 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+ .+.+..++.-.....+.++|..+....
T Consensus 134 ~---tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 134 E---TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred h---hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 9 888888877777777777775554433
No 255
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.05 E-value=0.031 Score=46.28 Aligned_cols=108 Identities=17% Similarity=0.068 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCc--hhhhHhh--HHHHHHHHHHHhh---------hhHHHHHHHHHHHhhhhh
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRK--SALMITN--VPSLCGWLLMATK---------SDLINLYISRLLSGLSVG 148 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~~ 148 (219)
.-.....++++=.+|..+..+.. .-++| .+++.+. ++.....+++... ++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34566777888888887554331 11222 3322221 1222222233221 355666777999999999
Q ss_pred cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 149 LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
...+....+..+..+++ +|..+..+...+..+|..+|..++.
T Consensus 388 y~~s~~m~~~p~~v~~~---e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPH---EREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHhcCCCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888 8988888888888888888876644
No 256
>KOG3574|consensus
Probab=97.02 E-value=0.028 Score=45.24 Aligned_cols=133 Identities=18% Similarity=0.203 Sum_probs=83.8
Q ss_pred Hhhhhhhccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhh-----hhCCchhhhH-hhHHHHHHHH
Q psy13786 55 LPGVAPGMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIID-----KYGRKSALMI-TNVPSLCGWL 125 (219)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~Grr~~~~~-~~~~~~~~~~ 125 (219)
+.+..+|.-.+... .+|.+. |.|-++.+....++ .-.--.+++.++.| |+||||..++ +..+.+..+.
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~ml 114 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFML 114 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHH
Confidence 44556666666655 666665 66666655443221 11123567888888 9999997665 3344444444
Q ss_pred HHHh-----------hhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 126 LMAT-----------KSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 126 ~~~~-----------~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
+.+. .++...+....++.-+..+.-..++-.+.-.+..++ +-|.+...+..+...|.+++..+.-
T Consensus 115 lLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e---~lgyaST~q~Vg~~~GyfL~~~ifL 190 (510)
T KOG3574|consen 115 LLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRE---NLGYASTCQSVGQTAGYFLGNVVFL 190 (510)
T ss_pred HHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHh---hcCchhHHHHHHHhhhHHhhcceee
Confidence 4443 123333444556666666666777778888888888 8888888888888888877765543
No 257
>KOG3098|consensus
Probab=96.79 E-value=0.15 Score=42.32 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHhhHhHhhh---hhCCchhhhHhhHHHHHHHHHHHhh------------------hhHHHHHHHHH
Q psy13786 83 SWFASISAITMPIGCLLSGPIID---KYGRKSALMITNVPSLCGWLLMATK------------------SDLINLYISRL 141 (219)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~g~l~d---~~Grr~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 141 (219)
+.......++..+++...+.+++ ++||++.+.++.++..+.+++.-.. +++....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33344456667777777777765 5899999999988888887775541 24556777789
Q ss_pred HHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 142 LSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 142 l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
+.|++-+...+..+.++.+..|. +|..+.++.-.-..+++.++-....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~~~----~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLYPD----DRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcC----chHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999955 4888888776666666655444433
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.60 E-value=0.021 Score=47.33 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=83.8
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-h---------hhHHHHHHHHHHHhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-K---------SDLINLYISRLLSGL 145 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~l~G~ 145 (219)
|+++...+.+..+..++..+|..+..+..-+..-|+++.++.++..+..+.-.. . ++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 388988999998888999999999888777778888888877766655443221 1 111222223345555
Q ss_pred hhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 146 SVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.....+-....+.+|.+|+. .-|+..++.....++|..++..++..+
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G---~Egt~yall~s~~Nlg~~~s~~lg~~l 377 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKG---SEGTVYALLASFSNLGSSVSSTLGAFL 377 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCC---chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566677899999999 889988888888888887777777666
No 259
>KOG3762|consensus
Probab=96.53 E-value=0.0037 Score=52.19 Aligned_cols=69 Identities=17% Similarity=0.187 Sum_probs=51.1
Q ss_pred hccccccccchhhcc---cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHh-hHHHHHHHHHHHh
Q psy13786 61 GMSFGFPAVALPQMS---YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMIT-NVPSLCGWLLMAT 129 (219)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~-~~~~~~~~~~~~~ 129 (219)
+...+...|.++.+. |+++.+.|.+...-.+..+++.|++|+++||+-+||.++++ .+......++..+
T Consensus 24 ~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~f 96 (618)
T KOG3762|consen 24 GARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVF 96 (618)
T ss_pred eecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheee
Confidence 333444445555444 99999999999999999999999999999999877766654 4445555555554
No 260
>KOG2563|consensus
Probab=96.47 E-value=0.0067 Score=49.55 Aligned_cols=117 Identities=15% Similarity=0.083 Sum_probs=75.2
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCC-chhhhHhhHHHHHHHHH-HHhh---hhHHHHHHHHHHHhhhhhcc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGR-KSALMITNVPSLCGWLL-MATK---SDLINLYISRLLSGLSVGLA 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~l~G~~~~~~ 150 (219)
|.+....|++.....++.++++...|.+.||... |....+......++... .... ...+.+...-.+.|++..+.
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 7777889999999999999999999999999754 44455555554444222 1111 22334455566777777778
Q ss_pred hhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 151 TTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.|...-+-.|..-|. .-++..|..++...+-+++-..+.+..
T Consensus 377 ~Pig~ElgvE~TyPv---~E~tSsGll~~~gq~f~~~~~~~~~~~ 418 (480)
T KOG2563|consen 377 LPIGFELGVETTYPV---AEGTSSGLLNLSGQIFGVILVFIMGIL 418 (480)
T ss_pred CCcceeeeeeecccc---CCcccceeEEeehhHHHHHHHHHHHHH
Confidence 888777777775444 455666655555444444444444443
No 261
>KOG1479|consensus
Probab=96.03 E-value=0.25 Score=40.24 Aligned_cols=108 Identities=17% Similarity=0.097 Sum_probs=71.4
Q ss_pred hHHHHHHH-HHHHHHHHHhhHhHhhhhhCCchhhhHhhH--HHHHHHHHH------HhhhhHHHHHHHHHHHhhhhhcch
Q psy13786 81 QASWFASI-SAITMPIGCLLSGPIIDKYGRKSALMITNV--PSLCGWLLM------ATKSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
-.-..... +++.-.+|.+...++-++ +||+..+.... +......+| ..-.+.+..+....+.|+..|-..
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 34445556 889999997777776555 34444333221 111111111 123456677788899999999998
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTG 192 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 192 (219)
+....+..+..|++ ++..+..+.......|...|..++
T Consensus 362 sl~m~~aPk~v~~~---e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPS---EKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hheehhcCCCCChH---HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 88899999999888 777776677777777777665554
No 262
>KOG2325|consensus
Probab=95.98 E-value=0.02 Score=47.69 Aligned_cols=67 Identities=9% Similarity=0.046 Sum_probs=50.0
Q ss_pred HHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHH
Q psy13786 141 LLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFL 210 (219)
Q Consensus 141 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 210 (219)
++.|.+.-.......+.-+|...++ ++++..+.+......+..++|++.... |.|+.+.+.....++
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~---~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPR---DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLV 466 (488)
T ss_pred heeccccccccchHHHHHHHHhCCc---cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHH
Confidence 4556555555666778889999999 899999999999999999998887766 667666555444333
No 263
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.80 E-value=0.23 Score=40.63 Aligned_cols=124 Identities=15% Similarity=0.010 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 85 FASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
+.-+-.+...+..+...+..+|...+.=+.+..+++.++.++.+++++.+.-+++-.+.+++.|......-.+ +..+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc
Confidence 3334444555667777888888876555566777888899999999999988888999999888776666665 445554
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHH
Q psy13786 165 HNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSLVLVA 216 (219)
Q Consensus 165 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~~~~~ 216 (219)
. ..+.+..+.+.++.+|+..-..+ +-|..++....++++..+..+
T Consensus 143 ~-------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f 192 (402)
T PF02487_consen 143 S-------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYF 192 (402)
T ss_pred c-------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 4 23445555555555554443333 456677776666655544443
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.38 E-value=1.4 Score=36.93 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=84.1
Q ss_pred cCChhhHHHHHHHHHH-HHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh---------hh-------------
Q psy13786 76 YLTIDQASWFASISAI-TMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK---------SD------------- 132 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~---------~~------------- 132 (219)
..+++...++=+..-+ ++++..++..++++++.|++++...........+++++. ++
T Consensus 57 ~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 57 RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 4667777888777777 677888999999999999999988777777777776641 11
Q ss_pred ----------HHHHHHHHHHHhhhhhcchh-hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 133 ----------LINLYISRLLSGLSVGLATT-PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 133 ----------~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.|...+.-.+.-+-...+.+ .-+....|.+..+ +-.|..+..+...+++..++..+..++
T Consensus 137 ~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~---eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 137 FLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIE---EAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred cceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH---HhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222233332233333 4567888999988 889999999999999999988887777
No 265
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.82 E-value=0.7 Score=37.94 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHh--hHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMIT--NVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVY 157 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 157 (219)
.--|.+-++..+...++++..|++..++.+..-+..+ .++.+...++++..+|.+...++-++.+.......+....-
T Consensus 285 vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~q 364 (412)
T PF01770_consen 285 VYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQ 364 (412)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788888888889999999997777665444433 34444556667778999999988888887777777888888
Q ss_pred hhhccCCCCccchhhHHHHHHHH
Q psy13786 158 AAECITIHNTDLRGSLSTWSTIA 180 (219)
Q Consensus 158 ~~~~~~~~~~~~r~~~~~~~~~~ 180 (219)
++.....+ .-|...|+++..
T Consensus 365 IA~~l~~e---~yaLVFGiNtf~ 384 (412)
T PF01770_consen 365 IAKNLSEE---RYALVFGINTFV 384 (412)
T ss_pred HHHhcccc---ceeeeeeeHHHH
Confidence 88888877 778888876664
No 266
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.78 E-value=0.008 Score=51.08 Aligned_cols=139 Identities=22% Similarity=0.253 Sum_probs=0.0
Q ss_pred HHhhhhhhccccccccchhhcc----cCChhhHHHHHHHHHH-HHHHHHhhHhHhhhhhC--CchhhhHhhHHHHHHHHH
Q psy13786 54 ILPGVAPGMSFGFPAVALPQMS----YLTIDQASWFASISAI-TMPIGCLLSGPIIDKYG--RKSALMITNVPSLCGWLL 126 (219)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~G--rr~~~~~~~~~~~~~~~~ 126 (219)
.++..........+..+.|.+. +.++.+++.+.....+ +.++|.+++|++..|+. .|+......+...++.+.
T Consensus 311 ~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~ 390 (539)
T PF03137_consen 311 ILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVIL 390 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 3444444455555566777766 8888888888766655 57788899999999874 344444444433333332
Q ss_pred HH---h-----------hhh----------------------------------------HHHHHHHHHHHhhhhhcchh
Q psy13786 127 MA---T-----------KSD----------------------------------------LINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 127 ~~---~-----------~~~----------------------------------------~~~~~~~~~l~G~~~~~~~~ 152 (219)
.. + ..+ +..+++..++.-+..+...+
T Consensus 391 ~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~ 470 (539)
T PF03137_consen 391 YSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQV 470 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhccc
Confidence 00 0 000 11222333333333333344
Q ss_pred hhhhhhhhccCCCCccchhhHHHHHHHHH-HHHHHHHHHHhhhh
Q psy13786 153 PAAVYAAECITIHNTDLRGSLSTWSTIAL-TSGILLSYLTGAFF 195 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~~~~~~~~~~ 195 (219)
......-...|++ +|+.++|+..... -+|.+-+|++.+.+
T Consensus 471 p~~~i~LR~V~~~---~rs~AlGv~~~~~rllg~IPgPIifG~i 511 (539)
T PF03137_consen 471 PSTLITLRCVPPE---QRSFALGVQWLIIRLLGFIPGPIIFGAI 511 (539)
T ss_dssp --------------------------------------------
T ss_pred chheeeeccCChh---hcchhhhHHHHHHHhhcCcchHHHHhHH
Confidence 4445556778888 9999999876555 45778888887766
No 267
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.29 E-value=0.014 Score=46.02 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHhhHhHhhhh-hCCchhhhHhh--HHHHHHHHHHH----------hhhhHHHHHHHHHHHhhhhhcch
Q psy13786 85 FASISAITMPIGCLLSGPIIDK-YGRKSALMITN--VPSLCGWLLMA----------TKSDLINLYISRLLSGLSVGLAT 151 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~l~G~~~~~~~ 151 (219)
....++++-.+|..+.++..=+ ..+|++...+. ++.....+++. ..++-+..++..++.|+..|...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556888888888877654211 12444433221 11222222221 12344566777899999999999
Q ss_pred hhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy13786 152 TPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGA 193 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 193 (219)
+....+..+..+++ +|..+..+...+..+|..+|..++.
T Consensus 267 tl~m~~~p~~v~~~---e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPE---ERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH--------------------------------------
T ss_pred hceeeeCCCcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 8888877888877777777765543
No 268
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.21 E-value=0.071 Score=46.43 Aligned_cols=59 Identities=22% Similarity=0.355 Sum_probs=44.1
Q ss_pred ccchhhcc----cCChhhHHHHHHHHHH-HHHHHHhhHhHhhhhhCC--chhhhHhhHHHHHHHHH
Q psy13786 68 AVALPQMS----YLTIDQASWFASISAI-TMPIGCLLSGPIIDKYGR--KSALMITNVPSLCGWLL 126 (219)
Q Consensus 68 ~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Gr--r~~~~~~~~~~~~~~~~ 126 (219)
..++|.+. |+++.+.+++.....+ +.+++.++.|++.||+++ |+.+.++.++..++.++
T Consensus 350 ~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 350 ITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 33455444 9999999999888776 678999999999999984 46666666666665444
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.05 E-value=3.3 Score=35.08 Aligned_cols=117 Identities=13% Similarity=0.130 Sum_probs=76.0
Q ss_pred cCChhhHHHHHHHHHH-HHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhh---------hh-------------
Q psy13786 76 YLTIDQASWFASISAI-TMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATK---------SD------------- 132 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~---------~~------------- 132 (219)
..+++.+.++=....+ ..++...+..+++++++|++++-+..........++++. ++
T Consensus 54 ~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~ 133 (491)
T PF03219_consen 54 AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPG 133 (491)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccch
Confidence 3456666666554444 345556779999999999999887776666655555531 11
Q ss_pred ---------HHHHHHHHHHHhhhhhcchh-hhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 133 ---------LINLYISRLLSGLSVGLATT-PAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 133 ---------~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.|...+.-...-+-.....+ .-+.+..|.++.+ +-.+..++.+.+.++|.+++..+....
T Consensus 134 ~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~---eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 134 FKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVE---EAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222232233333 4588999999999 888899999999999888887776655
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.04 E-value=2.5 Score=35.71 Aligned_cols=135 Identities=19% Similarity=0.191 Sum_probs=73.5
Q ss_pred HHhhhhhhccccccccchhhcc-----cCChhhHHHHHHH--HHHHHHHHHhhHhHhhh-----hhCCchhhhHh-hHHH
Q psy13786 54 ILPGVAPGMSFGFPAVALPQMS-----YLTIDQASWFASI--SAITMPIGCLLSGPIID-----KYGRKSALMIT-NVPS 120 (219)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~g~l~d-----~~Grr~~~~~~-~~~~ 120 (219)
.+.++.+|.-.+......|.+. +.+-+|.+...-+ .+- ..+++.++.| |+||||..++- -.+.
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfS----lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFS----LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhH----HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 3455666665555433444443 5555555543211 111 2345555544 89999987663 2333
Q ss_pred HHHHHHHHhhh------------------------hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHH
Q psy13786 121 LCGWLLMATKS------------------------DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTW 176 (219)
Q Consensus 121 ~~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 176 (219)
++..+..+... +...+....++.=+-.+.-..++-.+.-.+..++ +++.+...
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~---n~~~ASTc 158 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPE---NVGYASTC 158 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChh---hcchHHHH
Confidence 33333333211 0112233333333333444555666777777888 89988888
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q psy13786 177 STIALTSGILLSYLTGAFF 195 (219)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~ 195 (219)
+..+.+.|.+++..+.-.+
T Consensus 159 qtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HHhHhhhhHHHHHHHHHhh
Confidence 8888888888876665444
No 271
>KOG3880|consensus
Probab=92.71 E-value=0.23 Score=39.08 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHH---HHHhhhhHHHHHHHHHHHhhhhhcchhhhhh
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWL---LMATKSDLINLYISRLLSGLSVGLATTPAAV 156 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~ 156 (219)
.|.-|.+..+.+|-.+..-.....- ...-+.+.+--....+..+ ...+.++++...+.-+.-|+-.|..++...-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~--~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFT--MPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEe--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 3567888888776554432111110 0011222222223333332 3345788888888888999988888888888
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
-+.+-.+++ +|-.+++.....-.+|..++..++-.+
T Consensus 366 ~i~~e~~pd---~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 366 NIHKETEPD---VREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHhhcCCch---HHHHhHhhheecchhhHHHHHHHhccc
Confidence 888888888 999999999999999998888776544
No 272
>KOG4332|consensus
Probab=89.32 E-value=9 Score=30.02 Aligned_cols=153 Identities=15% Similarity=0.103 Sum_probs=89.4
Q ss_pred hhhhccccccccchhhcc-cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc--hhhhHhhHHHHHHHHHHHh----h
Q psy13786 58 VAPGMSFGFPAVALPQMS-YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK--SALMITNVPSLCGWLLMAT----K 130 (219)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~~~~~~~~~~~~~~~~~~----~ 130 (219)
.+.+........+.|.+. +-....-|.+.+.+.++..+|+-+..++..|-..| ..+.+.....+....+... +
T Consensus 259 LFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vs 338 (454)
T KOG4332|consen 259 LFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVS 338 (454)
T ss_pred HHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 344444444445556554 22333458899999999999999988877654433 4445544444443333222 1
Q ss_pred h---hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHH
Q psy13786 131 S---DLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYI 203 (219)
Q Consensus 131 ~---~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~ 203 (219)
+ +...-.++..+.-.+.|..+|...-+=.+..|.+ .|.+.+.++..-.++-.-++-..-... +=|..|-+
T Consensus 339 P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEe---arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~i 415 (454)
T KOG4332|consen 339 PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEE---ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGI 415 (454)
T ss_pred CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHH---HHhhhhhheechhhHhhhhhheecccccCccccchhhhh
Confidence 1 2233355566667788889999999999999999 999888776554433322221110011 44556666
Q ss_pred HHHHHHHHHH
Q psy13786 204 GAFVSFLSLV 213 (219)
Q Consensus 204 ~~~~~~~~~~ 213 (219)
+.+...+..+
T Consensus 416 cS~~~~~a~i 425 (454)
T KOG4332|consen 416 CSAFLFVASI 425 (454)
T ss_pred hHHHHHHHHH
Confidence 6655555433
No 273
>KOG0637|consensus
Probab=88.94 E-value=0.67 Score=38.43 Aligned_cols=129 Identities=14% Similarity=-0.067 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhcc-
Q psy13786 84 WFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECI- 162 (219)
Q Consensus 84 ~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~- 162 (219)
|-..++.+...+.+...-+++||+|-|+.+..+...+.++.-+.+..++......-+...|+-.+......+..+++..
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 4455566677788888899999999777777766666666666777777776666677777544444333333332221
Q ss_pred -------------------CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHH
Q psy13786 163 -------------------TIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF-----WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 163 -------------------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~w~~~~~~~~~~~~~~~ 212 (219)
+.++++.+|...|+.+....+-+++.....+.+ +-+.+....+++++...
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~ 489 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIG 489 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHH
Confidence 111122345666667776666665554444333 33444444444444433
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.80 E-value=9.2 Score=29.46 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhhHhHhhhh-hCCchhhh----HhhHHHHHHHHHHHh-----hhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 85 FASISAITMPIGCLLSGPIIDK-YGRKSALM----ITNVPSLCGWLLMAT-----KSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 85 ~~~~~~~~~~~~~~~~g~l~d~-~Grr~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
..-.+..+..+|....|+.+.. +.||+-+. .+.++..+..+.... ..+...+.+.-++.|++.=+.+++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3444555566666777777653 45555433 223333333333211 1245667778888888765555555
Q ss_pred hhhhhhccCCCCccchhhHHHHHHHHHHHHHHHH
Q psy13786 155 AVYAAECITIHNTDLRGSLSTWSTIALTSGILLS 188 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 188 (219)
-....|. +.. .+.+..-.....+++|.++-
T Consensus 226 L~lPhEy-K~~---~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 226 LNLPHEY-KGY---NPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred hcChhhh-cCC---CcceehhHHHHHHHHHHHHH
Confidence 4444443 333 23233334445555555543
No 275
>KOG3810|consensus
Probab=88.09 E-value=1.7 Score=34.94 Aligned_cols=100 Identities=9% Similarity=0.190 Sum_probs=79.8
Q ss_pred HHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchh
Q psy13786 92 TMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRG 171 (219)
Q Consensus 92 ~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~ 171 (219)
.+.+.-.+.-.+.|-.--|++++.-.+.....+.+.-+.++.+..-+.-++.|...+ ...+.++|+-+..+++ ++.
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~---~Yq 129 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPE---MYK 129 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHH---HHH
Confidence 344454555568898888999988888888888888899999988888889998765 4567788999999999 999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 172 SLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 172 ~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
++.+-...+.-.|.+.+..++..+
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlL 153 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLL 153 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHH
Confidence 999988777777777777776665
No 276
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=87.90 E-value=2.4 Score=35.75 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhH--hhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhh
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMI--TNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAA 159 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~ 159 (219)
-|.+-++..+...+.++..|++-.++.+---+.+ ..++.+...++++..+|.|..+++-++.+.......++...-++
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA 379 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIA 379 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777888889999999766644333333 33444455566777899999999999999888888888888899
Q ss_pred hccCCCCccchhhHHHHHHHHHH
Q psy13786 160 ECITIHNTDLRGSLSTWSTIALT 182 (219)
Q Consensus 160 ~~~~~~~~~~r~~~~~~~~~~~~ 182 (219)
.....+ .-|...|++++..-
T Consensus 380 ~~L~~~---~~aLvFGiNtfvAl 399 (511)
T TIGR00806 380 SSLSKE---LCALVFGINTFVAT 399 (511)
T ss_pred HHhccc---ceEEEEecHHHHHH
Confidence 888888 77888888776433
No 277
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=86.50 E-value=3.8 Score=26.99 Aligned_cols=40 Identities=15% Similarity=0.230 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHH
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSL 121 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~ 121 (219)
.+.......++..++..+.+.+.|..|.+..+.+......
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL 128 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence 3455566667777777788888887777666555444333
No 278
>KOG3097|consensus
Probab=86.35 E-value=5.8 Score=31.76 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=49.4
Q ss_pred HHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhcc
Q psy13786 90 AITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECI 162 (219)
Q Consensus 90 ~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 162 (219)
.+.-+..+++.+.+.+++|-|.++..+...+.... ..-+-+.+..++-.....|++.+..+..--+|+++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 33444566666688999999999988766655432 1223456677788888999998877766666665544
No 279
>COG1288 Predicted membrane protein [Function unknown]
Probab=83.15 E-value=21 Score=29.68 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=37.3
Q ss_pred hHhhHHHHHHHHHHHhhhhH--HHHHHHHHHHhhhhh------cchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHH
Q psy13786 114 MITNVPSLCGWLLMATKSDL--INLYISRLLSGLSVG------LATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGI 185 (219)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~~------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 185 (219)
+.-.++......+..+.+.. +..++...+.++..- ...-...+=++|...- .|..+.-.++.+.++-.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vgv----~RqvvV~Afq~g~G~~n 433 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVGV----PRQVVVLAFQLGDGFSN 433 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcCC----CHHHhhhhhhhcchhhh
Confidence 34445555555555554433 223344455554221 1111222234455544 47777777888777777
Q ss_pred HHHHH
Q psy13786 186 LLSYL 190 (219)
Q Consensus 186 ~~~~~ 190 (219)
++.|-
T Consensus 434 ~I~PT 438 (481)
T COG1288 434 IIAPT 438 (481)
T ss_pred eecCc
Confidence 66665
No 280
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=82.26 E-value=28 Score=29.08 Aligned_cols=128 Identities=15% Similarity=0.023 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHH----HHHHH--hh--h-----hH--HHHHHHHHHHhhhh
Q psy13786 83 SWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCG----WLLMA--TK--S-----DL--INLYISRLLSGLSV 147 (219)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~----~~~~~--~~--~-----~~--~~~~~~~~l~G~~~ 147 (219)
+...-.-.+..++.++..|...||..|.++...+.+.--++ +.+.. +. . +. ..+++.-.+.|...
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 33444455667788888999999999998876664433222 22222 11 1 11 11222222222211
Q ss_pred hcchhhhhh------hhhhcc--CCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHH
Q psy13786 148 GLATTPAAV------YAAECI--TIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 148 ~~~~~~~~~------~~~~~~--~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~~~~~ 214 (219)
- ....... ++..+. +++ ...+.++...-.=-+..+++|++.+.+ +.+....+.++..++...+
T Consensus 121 ~-Las~~~~iavERDWVvvi~~~~~~---~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 121 R-LASIANTIAVERDWVVVIAGGDPG---ALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred H-HHHhhhhheeccchhhhhcCCChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 1 1111111 122222 122 344444444444455788899888887 5555556566666655544
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=80.11 E-value=31 Score=28.17 Aligned_cols=85 Identities=21% Similarity=0.153 Sum_probs=56.3
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHH-------HHHHHHHh--hhhHHHHHHHHHHHhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSL-------CGWLLMAT--KSDLINLYISRLLSGLS 146 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~l~G~~ 146 (219)
|-+--|.+.+.+.+...+.+|+...-++.|.--.-+-+..-.++.. +..+.++. .++.+.+++.-+++|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 7777788899999999999999988887765322211111111111 11112222 34667788888999999
Q ss_pred hhcchhhhhhhhhh
Q psy13786 147 VGLATTPAAVYAAE 160 (219)
Q Consensus 147 ~~~~~~~~~~~~~~ 160 (219)
.|.-.|....++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99988988888766
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=79.77 E-value=37 Score=28.80 Aligned_cols=70 Identities=14% Similarity=-0.008 Sum_probs=46.7
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFL 210 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 210 (219)
.-++.|+.........-..+.|.+|.++ +|...+|-.+...++..++..++.+.+ ||+....+.-+..++
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~--~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPN--EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3455666666666666678888887653 688888877777777776665555555 888766655544443
No 283
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.58 E-value=14 Score=24.11 Aligned_cols=29 Identities=24% Similarity=0.159 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhhHhHhhhhh-CCchhhhH
Q psy13786 87 SISAITMPIGCLLSGPIIDKY-GRKSALMI 115 (219)
Q Consensus 87 ~~~~~~~~~~~~~~g~l~d~~-Grr~~~~~ 115 (219)
+.-+++.++-....||+.||| |.++..++
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 334455555556789999996 44444333
No 284
>KOG3810|consensus
Probab=76.07 E-value=9.5 Score=30.96 Aligned_cols=96 Identities=18% Similarity=0.144 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHhhHhHhhhhhCCch--hhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhh
Q psy13786 83 SWFASISAITMPIGCLLSGPIIDKYGRKS--ALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAE 160 (219)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 160 (219)
|..-++..+..+++.+..|++.-.+.|.. .+.++.+.-+...+++...+++|..+++-++.+.-.....++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45556677778888999999977666653 3444555555566667778888888888877777766677777778888
Q ss_pred ccCCCCccchhhHHHHHHHHH
Q psy13786 161 CITIHNTDLRGSLSTWSTIAL 181 (219)
Q Consensus 161 ~~~~~~~~~r~~~~~~~~~~~ 181 (219)
....+ .-|...|++....
T Consensus 354 nL~~e---~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 354 NLSSE---LFGLVFGINTFVA 371 (433)
T ss_pred hhhhh---hheeeeehHHHHH
Confidence 88888 7788888776643
No 285
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=74.24 E-value=21 Score=25.02 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHH
Q psy13786 131 SDLINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILL 187 (219)
Q Consensus 131 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 187 (219)
+++..+.....+.|+|.- .+.|..++--..++ +.|...|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~---r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPE---REGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCC---CCCCcccHHHHHHhHHHHH
Confidence 455566666666665542 45566777777777 7899999888877776654
No 286
>KOG3626|consensus
Probab=73.40 E-value=2.9 Score=37.05 Aligned_cols=75 Identities=21% Similarity=0.296 Sum_probs=48.5
Q ss_pred HHHHhhhhhhccccccccchhhcc----cCChhhHHHHHHHHHHH-HHHHHhhHhHhhhhhC--CchhhhHhhHHHHHHH
Q psy13786 52 IVILPGVAPGMSFGFPAVALPQMS----YLTIDQASWFASISAIT-MPIGCLLSGPIIDKYG--RKSALMITNVPSLCGW 124 (219)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~G--rr~~~~~~~~~~~~~~ 124 (219)
...++..+......-+..++|.+. |.+..++..+.....+. ..+|..++|++..|+- .|....+.++...+..
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 333444444455555566777776 89999999888766665 5577788999988763 4555555555544444
Q ss_pred HH
Q psy13786 125 LL 126 (219)
Q Consensus 125 ~~ 126 (219)
+.
T Consensus 476 ~~ 477 (735)
T KOG3626|consen 476 LF 477 (735)
T ss_pred HH
Confidence 43
No 287
>KOG3880|consensus
Probab=72.23 E-value=6.8 Score=31.20 Aligned_cols=132 Identities=11% Similarity=-0.018 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhc
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAEC 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 161 (219)
.|.+.-.-.+-..+-.+.+....||+.--+=..+..++.+.+.++.+++++.++-+++-.+..++.|......- -++..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL-~lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFL-ALSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehh-hhhcc
Confidence 45555556666777788888888886443334445566777788888899998888888888777765543332 33334
Q ss_pred cCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHh
Q psy13786 162 ITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF--WYTTVAYIGAFVSFLSLVLVAM 217 (219)
Q Consensus 162 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~ 217 (219)
+|+. .-+...+-.+.++-+|+.--..+..+. .-|...++...+.++.+...++
T Consensus 143 Y~~~---~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 143 YPSI---VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CCCc---eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHh
Confidence 4443 222111111222223333222333322 4566666666666555554444
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=71.41 E-value=66 Score=27.64 Aligned_cols=56 Identities=13% Similarity=0.063 Sum_probs=44.4
Q ss_pred HHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhh
Q psy13786 136 LYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAF 194 (219)
Q Consensus 136 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 194 (219)
+++.-.+..+.....+....++-+.+..|. .=|+.|.+.|+..++|+.-...+.-.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~---IGGTYMTLLNTvSNLGGtWP~~~vL~ 463 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPA---IGGTYMTLLNTVSNLGGTWPRTFVLW 463 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcc---cchHHHHHHHHHHhcCCCchHHHHHH
Confidence 334456777777777888889999999999 99999999999999998766655433
No 289
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=65.00 E-value=66 Score=28.59 Aligned_cols=77 Identities=6% Similarity=0.043 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHH
Q psy13786 135 NLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFL 210 (219)
Q Consensus 135 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 210 (219)
+.+.-.++.+++.........=+-.+..|++ .|....+++....++|..+...+...- .|--.+.+.++..++
T Consensus 567 wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~---mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 567 WQIPQYVILTAGEVLFSVTGLEFSYSQAPPN---MKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVV 643 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHH
Confidence 3334445566665544444444555667888 999999999999999999988887766 333334444444444
Q ss_pred HHHH
Q psy13786 211 SLVL 214 (219)
Q Consensus 211 ~~~~ 214 (219)
.+++
T Consensus 644 ~~~f 647 (654)
T TIGR00926 644 MAIF 647 (654)
T ss_pred HHHH
Confidence 4333
No 290
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=56.57 E-value=45 Score=25.68 Aligned_cols=19 Identities=21% Similarity=0.307 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHhhhhhhcc
Q psy13786 45 RLIYLGLIVILPGVAPGMS 63 (219)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~ 63 (219)
+|..-..+..+...+++..
T Consensus 180 ~RivG~~LAv~aGvlyGs~ 198 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSN 198 (254)
T ss_pred chhHhHHHHHHHHHHHhcc
Confidence 4444444444444554443
No 291
>KOG1237|consensus
Probab=53.23 E-value=1.6e+02 Score=25.83 Aligned_cols=60 Identities=8% Similarity=0.048 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 133 LINLYISRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 133 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
..+++---++.|++.........=+--+.+|++ .|+.+++++....++|..++..+....
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~s---MkS~~~al~l~t~a~G~~lss~Lv~~v 517 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPES---MKSVATALWLLTVAVGNYLSSVLVSLV 517 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445568999998877777777788889999 999999999999999999998887554
No 292
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=52.87 E-value=63 Score=21.16 Aligned_cols=49 Identities=12% Similarity=0.042 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 116 TNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
..+...+++++.++......---.|.+.+.|.-+.++...++..|...-
T Consensus 32 Tl~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 32 TLIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHHH
Confidence 3445666666655432111001123344555555667778888887654
No 293
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=52.39 E-value=87 Score=22.83 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhhHhHhhhhhCC
Q psy13786 86 ASISAITMPIGCLLSGPIIDKYGR 109 (219)
Q Consensus 86 ~~~~~~~~~~~~~~~g~l~d~~Gr 109 (219)
..-+.++..+.+.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 344677788899999999999875
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=50.81 E-value=1.5e+02 Score=24.88 Aligned_cols=33 Identities=9% Similarity=0.000 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhhhhhcchhhhhhhhhhccCCC
Q psy13786 132 DLINLYISRLLSGLSVGLATTPAAVYAAECITIH 165 (219)
Q Consensus 132 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 165 (219)
.++..++.-++.|++.+..+....++.+ .+|++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 3455556677888888877777777766 45555
No 295
>PRK10263 DNA translocase FtsK; Provisional
Probab=49.92 E-value=2.1e+02 Score=27.96 Aligned_cols=19 Identities=16% Similarity=0.238 Sum_probs=9.1
Q ss_pred HHHHHHHHhhHhHhhhhhC
Q psy13786 90 AITMPIGCLLSGPIIDKYG 108 (219)
Q Consensus 90 ~~~~~~~~~~~g~l~d~~G 108 (219)
+.+..+|..+...+..-||
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 4444445544444444444
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=48.22 E-value=1.8e+02 Score=24.97 Aligned_cols=70 Identities=11% Similarity=0.001 Sum_probs=42.1
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHH
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF----WYTTVAYIGAFVSFL 210 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~w~~~~~~~~~~~~~ 210 (219)
.-...|+.........-..+.+.+|+++ ++...+|-.+...++-..+-..+++.+ ||+....+.-+..++
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~~~~--~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYPDPN--DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 3445566666666666677788887762 566677755555555444444555544 898776665444433
No 297
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=48.21 E-value=66 Score=20.06 Aligned_cols=47 Identities=17% Similarity=0.080 Sum_probs=25.1
Q ss_pred HhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 143 SGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 143 ~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
+|++--...|..+.+..|..-.. .. .+.....+.+|.++|.+.....
T Consensus 4 mGigRFayTplLP~M~~~~~ls~---~~---ag~lasaNy~GYL~GAl~~~~~ 50 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSL---SQ---AGWLASANYLGYLVGALLASRL 50 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCH---HH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 35555556677777777764333 22 2344444455555555555544
No 298
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=47.22 E-value=67 Score=24.36 Aligned_cols=47 Identities=11% Similarity=0.062 Sum_probs=30.7
Q ss_pred HHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHH
Q psy13786 141 LLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLT 191 (219)
Q Consensus 141 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 191 (219)
.=.|.|.+...+....-+.+.+|.. .....++....+-+.+..|-..
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P~~----a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYPEM----ADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCcch----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888888888888888888754 5555555555555555444433
No 299
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.37 E-value=44 Score=21.86 Aligned_cols=48 Identities=15% Similarity=0.021 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHH
Q psy13786 79 IDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLL 126 (219)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~ 126 (219)
++..|-+.+++.-.+++.++.+++..|+.-+-+-=.++..+..++..+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 356788888899899999999999999987666555565555554443
No 300
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=46.27 E-value=1e+02 Score=21.55 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhHhHhhhhhCCch
Q psy13786 86 ASISAITMPIGCLLSGPIIDKYGRKS 111 (219)
Q Consensus 86 ~~~~~~~~~~~~~~~g~l~d~~Grr~ 111 (219)
..-+.++..+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 44567788888999999999987764
No 301
>COG4769 Predicted membrane protein [Function unknown]
Probab=44.64 E-value=80 Score=22.54 Aligned_cols=47 Identities=17% Similarity=0.056 Sum_probs=28.0
Q ss_pred HHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy13786 93 MPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGL 145 (219)
Q Consensus 93 ~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 145 (219)
..+.+...=++..++|+|.+-.++.-. .-++.+|..++++.+++.+-
T Consensus 86 G~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 86 GAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 333444455677888888774444322 22456777777777776653
No 302
>PRK02237 hypothetical protein; Provisional
Probab=44.18 E-value=74 Score=20.88 Aligned_cols=48 Identities=15% Similarity=-0.005 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHH
Q psy13786 80 DQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLM 127 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~ 127 (219)
+..|-+.+++.-.+++.++.+++..|+.-+-+-=.++..+..++..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 457888899999999999999999998866555555555555554443
No 303
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=43.88 E-value=97 Score=20.72 Aligned_cols=49 Identities=18% Similarity=0.117 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 116 TNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
..+...+++++.++......---.|.+.+.|.-+.++...++..|...-
T Consensus 36 Tl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~l 84 (119)
T PRK14230 36 NLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTL 84 (119)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHHHH
Confidence 4556666666665532211000124444555555566777777776643
No 304
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=42.93 E-value=1.1e+02 Score=21.10 Aligned_cols=29 Identities=10% Similarity=-0.027 Sum_probs=19.7
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGILLS 188 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 188 (219)
-+.|++|++ .|....+..+.......-..
T Consensus 59 aLkdi~P~~---~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 59 ALKDIFPPS---VRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HHhccCCHH---HHHHHHHHHHHHHHHHHHHH
Confidence 357899999 99888776665544444333
No 305
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=40.30 E-value=2.3e+02 Score=24.01 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=52.7
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh-h--hhHHHHHHHHHHHhhhhhcchh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT-K--SDLINLYISRLLSGLSVGLATT 152 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~G~~~~~~~~ 152 (219)
|++.++...+.+.-.+...++.++.-....+.|-|-....+.-+..++...... . ........+-+..|+......+
T Consensus 45 ~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~ 124 (451)
T COG2233 45 GLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISP 124 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999887665333355565555555444444443333 2 1244444444555544433222
Q ss_pred hhhhhhhhccCCC
Q psy13786 153 PAAVYAAECITIH 165 (219)
Q Consensus 153 ~~~~~~~~~~~~~ 165 (219)
.....+...+||-
T Consensus 125 ~~~~~l~rlfPPv 137 (451)
T COG2233 125 IVKIRLARLFPPV 137 (451)
T ss_pred HHHHHHHHhCCCc
Confidence 2222666666665
No 306
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=40.04 E-value=93 Score=19.44 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=25.0
Q ss_pred HHHhhHhHhhhhhCC-------chhhhHhhHHHHHHHHHHHhhhhH
Q psy13786 95 IGCLLSGPIIDKYGR-------KSALMITNVPSLCGWLLMATKSDL 133 (219)
Q Consensus 95 ~~~~~~g~l~d~~Gr-------r~~~~~~~~~~~~~~~~~~~~~~~ 133 (219)
...+..+++.+|..+ ++.+..+.++...+.++++..++.
T Consensus 33 a~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 33 AASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 445566666666544 667777777777777777765543
No 307
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=39.01 E-value=2.1e+02 Score=23.30 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=56.8
Q ss_pred HHHHHHHhhHhHhhhhh--CCchhhhHhhHHHHHHHHHHHh--hhhH-------------H---HHHHH--H-HHHhhhh
Q psy13786 91 ITMPIGCLLSGPIIDKY--GRKSALMITNVPSLCGWLLMAT--KSDL-------------I---NLYIS--R-LLSGLSV 147 (219)
Q Consensus 91 ~~~~~~~~~~g~l~d~~--Grr~~~~~~~~~~~~~~~~~~~--~~~~-------------~---~~~~~--~-~l~G~~~ 147 (219)
+..+..++++-.+.|.. |++.++..+..+.+++.++... ..|+ . ..+.. | .+.|+.+
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHH
Confidence 33455555666677766 4577888888877777666543 1111 0 11111 1 4667777
Q ss_pred hcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHh
Q psy13786 148 GLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTG 192 (219)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 192 (219)
+......+..+-.|.|.-+.+.+..-.|+...+.....++|..+.
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf 298 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLF 298 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 777778888888887764321333444444444444444444333
No 308
>KOG3097|consensus
Probab=38.15 E-value=1.5e+02 Score=24.24 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=39.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHH
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLC 122 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~ 122 (219)
+..-++.+.....+.++..+.+.+.|.+..++||-+....+.+....
T Consensus 306 ~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~ 352 (390)
T KOG3097|consen 306 ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLL 352 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHH
Confidence 44556788899999999999999999999999999988877655543
No 309
>KOG1479|consensus
Probab=38.09 E-value=2.4e+02 Score=23.55 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhhhhcchhhhhhhhhhccCCC
Q psy13786 133 LINLYISRLLSGLSVGLATTPAAVYAAECITIH 165 (219)
Q Consensus 133 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 165 (219)
+...++.-.+.+.+.+..+.......++ +|++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 4445555677777777766666666555 4555
No 310
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=37.08 E-value=1.4e+02 Score=20.81 Aligned_cols=27 Identities=7% Similarity=-0.116 Sum_probs=18.6
Q ss_pred hhhhccCCCCccchhhHHHHHHHHHHHHHH
Q psy13786 157 YAAECITIHNTDLRGSLSTWSTIALTSGIL 186 (219)
Q Consensus 157 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 186 (219)
-+.|++|+. .|....+.++.......-
T Consensus 57 ALkDm~Pp~---~R~~i~~~~s~t~s~~ks 83 (145)
T TIGR00986 57 ALKDIVPPT---TRGWIYHKYSTTTNFVKS 83 (145)
T ss_pred HHHhhCCHH---HHHHHHHHHHHHHHHHHH
Confidence 467899999 998877766555444433
No 311
>PRK11469 hypothetical protein; Provisional
Probab=32.38 E-value=2e+02 Score=20.98 Aligned_cols=51 Identities=16% Similarity=0.123 Sum_probs=29.6
Q ss_pred cCChhhHHHHHHHHHHHHHH-HHhhHhHhhhhhCCchhhhHhhHHHHHHHHH
Q psy13786 76 YLTIDQASWFASISAITMPI-GCLLSGPIIDKYGRKSALMITNVPSLCGWLL 126 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~ 126 (219)
|.+................. |..++.++.+++|||.-++-+.++..++.-.
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444333 3344555667888888777777777776544
No 312
>PRK14211 camphor resistance protein CrcB; Provisional
Probab=29.86 E-value=1.7e+02 Score=19.36 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=34.8
Q ss_pred HHHHHHHHhhHhHhhhhhCCchhhh-HhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchhhhhhhhhhccCC
Q psy13786 90 AITMPIGCLLSGPIIDKYGRKSALM-ITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATTPAAVYAAECITI 164 (219)
Q Consensus 90 ~~~~~~~~~~~g~l~d~~Grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 164 (219)
.++..+|+..==.++....+++.+. ...+...+++++.++......---.|.+.+.|.-+.++...++..|...-
T Consensus 7 ~~Gg~~Ga~~Ry~l~~~~~~~~~fP~gTl~vN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 82 (114)
T PRK14211 7 ALGGALGATTRYLTGRYVDSYRSFPVATFLVNVAGCLILGLLSGASLSTQTFALLGTGFCGGLTTYSTFAVESVGL 82 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhhcCCcCcHHHHHHHHHHH
Confidence 3455555543323333332211122 23455666666665532111000124444555555567777777776644
No 313
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=29.76 E-value=2.3e+02 Score=20.78 Aligned_cols=24 Identities=13% Similarity=0.063 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Q psy13786 174 STWSTIALTSGILLSYLTGAFFWY 197 (219)
Q Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~~w 197 (219)
....-.+..+|..++..+....+.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334445555566666555554453
No 314
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.75 E-value=1.6e+02 Score=19.07 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=11.6
Q ss_pred HHHhhHhHhhh-hhCCchhhhHhh
Q psy13786 95 IGCLLSGPIID-KYGRKSALMITN 117 (219)
Q Consensus 95 ~~~~~~g~l~d-~~Grr~~~~~~~ 117 (219)
+.+...|...| +++-++.+.+.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~ 80 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTM 80 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHH
Confidence 34444555555 567665444433
No 315
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=28.66 E-value=80 Score=20.06 Aligned_cols=25 Identities=24% Similarity=0.422 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHhhHhHhhhhhCCc
Q psy13786 86 ASISAITMPIGCLLSGPIIDKYGRK 110 (219)
Q Consensus 86 ~~~~~~~~~~~~~~~g~l~d~~Grr 110 (219)
.........+-+.+.|.+.||..||
T Consensus 81 ~~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 81 DWITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3344555666778889999998765
No 316
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=28.30 E-value=1.7e+02 Score=22.20 Aligned_cols=52 Identities=13% Similarity=0.048 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHH
Q psy13786 89 SAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISR 140 (219)
Q Consensus 89 ~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (219)
..+|..+|..+..++.||+...-.-..+.....++.-...-.++...+++..
T Consensus 11 Il~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~sl 62 (226)
T PF04474_consen 11 ILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILSL 62 (226)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHHH
Confidence 3556667777777788887555455555555555544444445554444433
No 317
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=27.65 E-value=3.5e+02 Score=22.33 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=53.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHH-hhhhHHHHHHHHHHHhhhhhcchhhh
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMA-TKSDLINLYISRLLSGLSVGLATTPA 154 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~~~~~~~~~ 154 (219)
|+++++.....+...+...+++++..+-.-++|.|.++..+.-...+...... ....+......-++.|+..-... ..
T Consensus 24 gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg-~~ 102 (406)
T TIGR03173 24 GLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA-PF 102 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HH
Confidence 88888888888888888888887764322257777777665544333322221 12344444444555555432222 24
Q ss_pred hhhhhhccCCCCccchhh
Q psy13786 155 AVYAAECITIHNTDLRGS 172 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~r~~ 172 (219)
...+.+.+|+. ..|.
T Consensus 103 ~~~l~~~iPp~---v~G~ 117 (406)
T TIGR03173 103 FSKLVRFFPPV---VTGT 117 (406)
T ss_pred HHHHHHHCCcH---HHHH
Confidence 45677778877 5554
No 318
>KOG4112|consensus
Probab=27.64 E-value=1.7e+02 Score=18.66 Aligned_cols=39 Identities=18% Similarity=0.330 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHH
Q psy13786 176 WSTIALTSGILLSYLTGAFF-WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 176 ~~~~~~~~g~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~ 214 (219)
+++....+|+++|-+.+.+. ...+..++.++-+++.+++
T Consensus 27 ~~q~ilti~aiVg~i~Gf~~Qqls~tvy~vg~~~v~t~li 66 (101)
T KOG4112|consen 27 FQQLILTIGAIVGFIYGFAQQQLSVTVYIVGAGFVFTLLI 66 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67777778888886666655 4555555555554444443
No 319
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=27.27 E-value=93 Score=15.54 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHhhHhHhhhh
Q psy13786 87 SISAITMPIGCLLSGPIIDK 106 (219)
Q Consensus 87 ~~~~~~~~~~~~~~g~l~d~ 106 (219)
++..+..++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 45566777777777777554
No 320
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=27.02 E-value=3.2e+02 Score=21.68 Aligned_cols=31 Identities=13% Similarity=0.232 Sum_probs=19.7
Q ss_pred chhhHHH-HHHHHHHHHHHHHHHHhhhhhhHH
Q psy13786 169 LRGSLST-WSTIALTSGILLSYLTGAFFWYTT 199 (219)
Q Consensus 169 ~r~~~~~-~~~~~~~~g~~~~~~~~~~~~w~~ 199 (219)
.|+...- +.-+..++|.+++.++..+.+|.|
T Consensus 155 ~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~ 186 (296)
T COG1230 155 MRGAYLHVLGDALGSVGVIIAAIVIRFTGWSW 186 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5665555 355666777777766666557776
No 321
>KOG2765|consensus
Probab=27.00 E-value=40 Score=27.53 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHh
Q psy13786 83 SWFASISAITMPIGCLLSGPIIDKYGRKSALMIT 116 (219)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~ 116 (219)
..+.+...+-..+-+.+.+ .||+.-.|++.+.
T Consensus 189 TilSStSs~FtL~la~if~--~e~ft~sKllav~ 220 (416)
T KOG2765|consen 189 TILSSTSSFFTLFLAAIFP--VERFTLSKLLAVF 220 (416)
T ss_pred hhhhhcchHHHHHHHHHcC--cchhhHHHHHHHH
Confidence 3444444444444444444 8999888887653
No 322
>KOG3574|consensus
Probab=26.70 E-value=1.6e+02 Score=24.70 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=41.4
Q ss_pred HHHHHhhhhhcchhhhhhhhhhccCCCCccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 139 SRLLSGLSVGLATTPAAVYAAECITIHNTDLRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 139 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
...+.+......+....+..+++.++. .-|+.+.+.|.-.++|+.--..+...+
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~---iggTymTlLNTLsnLGg~wp~tv~l~l 428 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPA---IGGTYMTLLNTLSNLGGNWPGTVALWL 428 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcc---cCccHHHHHHHHHHhcCCcHHHHHHHh
Confidence 456666666667778888999999999 999999999999988876554444433
No 323
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.87 E-value=1.7e+02 Score=17.75 Aligned_cols=8 Identities=25% Similarity=0.484 Sum_probs=3.0
Q ss_pred hhHhHhhh
Q psy13786 98 LLSGPIID 105 (219)
Q Consensus 98 ~~~g~l~d 105 (219)
.+.|+..+
T Consensus 25 fi~Gy~~q 32 (76)
T PF06645_consen 25 FIVGYITQ 32 (76)
T ss_pred HHHHHHHH
Confidence 33333333
No 324
>PRK10692 hypothetical protein; Provisional
Probab=24.14 E-value=1.8e+02 Score=18.21 Aligned_cols=19 Identities=37% Similarity=0.440 Sum_probs=11.4
Q ss_pred CchhhhHhhHHHHHHHHHH
Q psy13786 109 RKSALMITNVPSLCGWLLM 127 (219)
Q Consensus 109 rr~~~~~~~~~~~~~~~~~ 127 (219)
||....++-++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5666666666666665543
No 325
>CHL00114 psbX photosystem II protein X; Reviewed
Probab=24.02 E-value=1.2e+02 Score=15.77 Aligned_cols=23 Identities=9% Similarity=0.056 Sum_probs=10.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhH
Q psy13786 78 TIDQASWFASISAITMPIGCLLS 100 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~ 100 (219)
+++..+++.+...-+.++.-++.
T Consensus 2 TpSLsnF~~SL~~Ga~ivvipi~ 24 (39)
T CHL00114 2 TPSLSAFINSLLLGAIIVVIPIT 24 (39)
T ss_pred ChhHHHHHHHHHHHHHHhHHHhh
Confidence 34444555555444444443433
No 326
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=24.02 E-value=1.7e+02 Score=23.62 Aligned_cols=47 Identities=19% Similarity=0.196 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHh
Q psy13786 83 SWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMAT 129 (219)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~ 129 (219)
.+.....++|..++....+++.|++|....+.+..+.+.++.+.+..
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 35566778888888888899999999988888888888877776654
No 327
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=23.81 E-value=4.3e+02 Score=21.99 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=48.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhcchh----
Q psy13786 77 LTIDQASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGWLLMATKSDLINLYISRLLSGLSVGLATT---- 152 (219)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~---- 152 (219)
.++++...+.+...+...+++++-+....+.-|-+....................++......-++.|+.......
T Consensus 34 l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~ 113 (415)
T TIGR00801 34 LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKK 113 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888999999999999888766543222222222212211111122222344334444444444332221
Q ss_pred hhhhhhhhccCCCCccchhh
Q psy13786 153 PAAVYAAECITIHNTDLRGS 172 (219)
Q Consensus 153 ~~~~~~~~~~~~~~~~~r~~ 172 (219)
....++.+.+|+. ..+.
T Consensus 114 ~~~~~i~~~~Pp~---v~g~ 130 (415)
T TIGR00801 114 LGPRWLMKLFPPV---VTGP 130 (415)
T ss_pred hhHHHHHhcCCch---hHHH
Confidence 1223457778887 6665
No 328
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=23.30 E-value=4.2e+02 Score=21.72 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=11.5
Q ss_pred HHHHHHHhhHhHhhhhhCCch
Q psy13786 91 ITMPIGCLLSGPIIDKYGRKS 111 (219)
Q Consensus 91 ~~~~~~~~~~g~l~d~~Grr~ 111 (219)
++..+.+.+...+.||.++.+
T Consensus 251 ~~ami~g~ivrn~~~~~~~~~ 271 (368)
T PF03616_consen 251 VGAMIVGIIVRNILDKTGKYK 271 (368)
T ss_pred HHHHHHHHHHHHHHHHhCccc
Confidence 344455555566667665433
No 329
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=22.89 E-value=3e+02 Score=19.85 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=41.7
Q ss_pred cCChhhHHHHHHHHH--HHHHHHHhhHhHhhhhh-CCchhhhHhhHHHHHHHHHHH--------h----hhhHHHHHHHH
Q psy13786 76 YLTIDQASWFASISA--ITMPIGCLLSGPIIDKY-GRKSALMITNVPSLCGWLLMA--------T----KSDLINLYISR 140 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~~~~~g~l~d~~-Grr~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~ 140 (219)
....+..|.+.++.. +-.++.+++.-.+-.|+ |.-+-++-|.+.+++-.+++. . .++...-++..
T Consensus 62 ~wk~t~~G~~igi~~~gv~Si~aAllY~~~l~k~~g~W~Gi~YG~~~W~ivF~~lnP~fp~~~~~~~l~~nTiiT~~Ciy 141 (173)
T PF11085_consen 62 DWKNTWLGNLIGIVFIGVFSIVAALLYYALLKKFKGPWPGILYGLAWWAIVFFVLNPIFPMIKPVTELDWNTIITTLCIY 141 (173)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcccccCChhhhhCchhHHHHHHHHH
Confidence 445556666655543 33556666655555553 455555666666665554442 1 23444455567
Q ss_pred HHHhhhhhcc
Q psy13786 141 LLSGLSVGLA 150 (219)
Q Consensus 141 ~l~G~~~~~~ 150 (219)
.+.|++.|..
T Consensus 142 iLyGlFIGYS 151 (173)
T PF11085_consen 142 ILYGLFIGYS 151 (173)
T ss_pred HHHHHHhcee
Confidence 7888887643
No 330
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=22.88 E-value=3e+02 Score=20.20 Aligned_cols=43 Identities=19% Similarity=0.424 Sum_probs=24.9
Q ss_pred ccchhhcccCChhhHHHHHHHHHHHHHHHHhh---------HhHhhhhhCCc
Q psy13786 68 AVALPQMSYLTIDQASWFASISAITMPIGCLL---------SGPIIDKYGRK 110 (219)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~l~d~~Grr 110 (219)
+.+.|.+.+.+..+.......+.+...+-+.. .+...||+||+
T Consensus 114 gIYiP~Fa~~s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~ 165 (191)
T PF03596_consen 114 GIYIPLFASLSLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRW 165 (191)
T ss_pred EEeehhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhccc
Confidence 44556555667777666666655554444333 34556677765
No 331
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=22.84 E-value=3.5e+02 Score=23.38 Aligned_cols=27 Identities=26% Similarity=0.171 Sum_probs=17.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy13786 169 LRGSLSTWSTIALTSGILLSYLTGAFF 195 (219)
Q Consensus 169 ~r~~~~~~~~~~~~~g~~~~~~~~~~~ 195 (219)
.||......-..+.+.+.++...++.+
T Consensus 294 ~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 294 NRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred CcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 577777766666666666666666555
No 332
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=22.79 E-value=3.4e+02 Score=20.52 Aligned_cols=17 Identities=12% Similarity=-0.416 Sum_probs=8.4
Q ss_pred hhHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSL 212 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~ 212 (219)
+..|.+.+.+++..+..
T Consensus 50 ~~~~~~~i~gi~~g~l~ 66 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLA 66 (224)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 44455555555544433
No 333
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=21.85 E-value=1.2e+02 Score=17.84 Aligned_cols=35 Identities=11% Similarity=-0.024 Sum_probs=29.9
Q ss_pred cCChhhHHHHHHHHHHHHHHHHhhHhHhhhhhCCc
Q psy13786 76 YLTIDQASWFASISAITMPIGCLLSGPIIDKYGRK 110 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr 110 (219)
|.+..+.+.+.....+...+=..+..++-||+=+|
T Consensus 30 ~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 30 GISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888888888888888888889999999987554
No 334
>PRK03612 spermidine synthase; Provisional
Probab=21.16 E-value=4.1e+02 Score=22.96 Aligned_cols=36 Identities=8% Similarity=0.081 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhHh-hhhhCCchhhhH
Q psy13786 80 DQASWFASISAITMPIGCLLSGPI-IDKYGRKSALMI 115 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~g~l-~d~~Grr~~~~~ 115 (219)
...|.+.+...+|.++|++..+.+ .+.+|-.....+
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~ 181 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAAL 181 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 456777788888888888877764 457776554433
No 335
>COG2119 Predicted membrane protein [Function unknown]
Probab=20.92 E-value=3.2e+02 Score=20.05 Aligned_cols=36 Identities=17% Similarity=0.053 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhHhHhhhhhCCchhhhHhhHHHHHHH
Q psy13786 89 SAITMPIGCLLSGPIIDKYGRKSALMITNVPSLCGW 124 (219)
Q Consensus 89 ~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~~~~~~~ 124 (219)
..+...++-..+.++++|+..|++-.++.+++.+..
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 345556666677788999999988887766655444
No 336
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.90 E-value=2.1e+02 Score=18.00 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhhhhcchhhhhhhhhhccCCC
Q psy13786 134 INLYISRLLSGLSVGLATTPAAVYAAECITIH 165 (219)
Q Consensus 134 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 165 (219)
+-++++|.+.|-+.+...........|.-|..
T Consensus 32 ~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~plA 63 (89)
T PF04550_consen 32 LRLFIGRVILGSAVSVVAGAALIQFPDLPPLA 63 (89)
T ss_pred hhHHhHHHHHhhHHHHHHHHHHhcCCCCCHHH
Confidence 45777888888777655544444444444443
No 337
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=20.74 E-value=1.2e+02 Score=17.48 Aligned_cols=19 Identities=21% Similarity=0.546 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy13786 196 WYTTVAYIGAFVSFLSLVL 214 (219)
Q Consensus 196 ~w~~~~~~~~~~~~~~~~~ 214 (219)
+||....+.+.+.++++.+
T Consensus 4 g~r~~~~~ggfVg~iG~a~ 22 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAAL 22 (58)
T ss_pred cccchhhHHHHHHHHHHHH
Confidence 5666666666666555544
No 338
>KOG2601|consensus
Probab=20.64 E-value=5.2e+02 Score=21.79 Aligned_cols=37 Identities=8% Similarity=0.071 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhHhhhhhCCchhhhHhhH
Q psy13786 82 ASWFASISAITMPIGCLLSGPIIDKYGRKSALMITNV 118 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~~~~~~~ 118 (219)
.+....+-.....+..++.|...|+..|+|++.....
T Consensus 65 vAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 65 VAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred HHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 3334444455566677788888999999998876543
No 339
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=20.22 E-value=3.7e+02 Score=19.90 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=22.1
Q ss_pred cCChhhHHHHHHHHHHHHH-HHHhhHhHhhhh--hCCchhhhHhhHHHHHH
Q psy13786 76 YLTIDQASWFASISAITMP-IGCLLSGPIIDK--YGRKSALMITNVPSLCG 123 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~l~d~--~Grr~~~~~~~~~~~~~ 123 (219)
|.+.........+...... .|..++.++.++ .|++. ++-+.++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 4444444444433333333 333344445555 46665 66666655554
Done!