BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1379
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2
Length = 727
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 161/250 (64%), Gaps = 7/250 (2%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
ML+ L +FVELMDHGIVSW+ FIK +A VN + I+Q SL+ILES+ LN
Sbjct: 154 MLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKS--AIDISILQRSLAILESMVLN 211
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCS 120
S + + +Q +T+ L+ HLQ IQ IA+INALF+KA +R+ ++ +
Sbjct: 212 SHDLYQKVAQ---EITIGQLIPHLQGSDQEIQTYTIAVINALFLKAPDERRQEMANILAQ 268
Query: 121 KQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKEL 180
KQ+R+ ILT V++ + EMAHQLYVLQ LT LLE RM TKMDPQDQ D I EL
Sbjct: 269 KQLRSIILTHVIRAQRA-INNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFEL 327
Query: 181 RRVAFEIDV-IGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIYF 239
RR+AF+ + S +++ Y +DYKKLGF +NPA DFT+TPPGMLALD M+YF
Sbjct: 328 RRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYF 387
Query: 240 ARNHPEAYTK 249
A++H +AY +
Sbjct: 388 AKHHQDAYIR 397
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 110/200 (55%), Gaps = 23/200 (11%)
Query: 255 KTLEGTAEKVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVNHSQAGL------ 307
+ ++ ++ +L L D +LS DV+ F+ +F+ LD ++L ++G
Sbjct: 90 ERIQSSSMDAKLEALKDLASLSRDVT------FAQEFINLDGISLLTQMVESGTERYQKL 143
Query: 308 ------CV--MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQAS 359
C ML+ L +FVELMDHGIVSW+ FIK +A VN + I+Q S
Sbjct: 144 QKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKS--AIDISILQRS 201
Query: 360 LSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKV 419
L+ILES+ LNS + +V +T+ L+ HLQ IQ IA+INALF+KA +R+
Sbjct: 202 LAILESMVLNSHDLYQKVAQEITIGQLIPHLQGSDQEIQTYTIAVINALFLKAPDERRQE 261
Query: 420 ISATMCSKQVRNAILTSVLQ 439
++ + KQ+R+ ILT V++
Sbjct: 262 MANILAQKQLRSIILTHVIR 281
>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1
PE=1 SV=2
Length = 727
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 160/250 (64%), Gaps = 7/250 (2%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
ML+ L +FVELMDHGIVSW+ FIK +A VN + I+Q SL+ILES+ LN
Sbjct: 154 MLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKS--AIDISILQRSLAILESMVLN 211
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCS 120
S + + +Q +T+ L+ HLQ IQ IA+INALF+KA +R+ ++ +
Sbjct: 212 SHDLYQKVAQ---EITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQ 268
Query: 121 KQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKEL 180
KQ+R ILT V++ + EMAHQLYVLQ LT LLE RM TKMDPQDQ D I EL
Sbjct: 269 KQLRYIILTHVIRAQRA-INNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFEL 327
Query: 181 RRVAFEIDV-IGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIYF 239
RR+AF+ + S +++ Y +DYKKLGF +NPA DFT+TPPGMLALD M+YF
Sbjct: 328 RRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYF 387
Query: 240 ARNHPEAYTK 249
A++H +AY +
Sbjct: 388 AKHHQDAYIR 397
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 23/200 (11%)
Query: 255 KTLEGTAEKVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVNHSQAGL------ 307
+ ++ ++ +L L D +LS DV+ F+ +F+ LD ++L ++G
Sbjct: 90 ERIQSSSMDAKLEALKDLASLSRDVT------FAQEFINLDGISLLTQMVESGTERYQKL 143
Query: 308 ------CV--MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQAS 359
C ML+ L +FVELMDHGIVSW+ FIK +A VN + I+Q S
Sbjct: 144 QKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKS--AIDISILQRS 201
Query: 360 LSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKV 419
L+ILES+ LNS + +V +T+ L+ HLQ IQ IA+INALF+KA +R+
Sbjct: 202 LAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQE 261
Query: 420 ISATMCSKQVRNAILTSVLQ 439
++ + KQ+R ILT V++
Sbjct: 262 MANILAQKQLRYIILTHVIR 281
>sp|Q5RCC1|ELMO2_PONAB Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2
PE=2 SV=1
Length = 720
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 162/251 (64%), Gaps = 8/251 (3%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I+Q SL+ILES+ LN
Sbjct: 146 MLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSILQRSLAILESMVLN 203
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCS 120
S S + ++ +T+ L+ HLQ + IQ AIALINALF+KA KR+ ++
Sbjct: 204 SQ---SLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDMANAFAQ 260
Query: 121 KQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKEL 180
K +R+ IL V++ + EMAHQLYVLQ LT LLE+RM TKMDP DQ D I EL
Sbjct: 261 KHLRSIILNHVIR-GNRPIKTEMAHQLYVLQVLTFNLLEERMMTKMDPNDQAQRDIIFEL 319
Query: 181 RRVAF--EIDVIGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIY 238
RR+AF E D + ++++ Y KDYK LGF INPA DFT+TPPGMLALD M+Y
Sbjct: 320 RRIAFDAESDPSNAPGSGTEKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLY 379
Query: 239 FARNHPEAYTK 249
A+ H + Y +
Sbjct: 380 LAKVHQDTYIR 390
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 18/204 (8%)
Query: 246 AYTKQKATKKTLEGTAE---KVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVN 301
A + +A ++ +E T + RL + + LS+DV+ F+ +F+ +D VL
Sbjct: 78 AISPSRAARQLMERTQSSNMETRLDAMKELAKLSADVT------FATEFINMDGIIVLTR 131
Query: 302 HSQAGLCV------MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEI 355
++G + MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I
Sbjct: 132 LVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSI 189
Query: 356 VQASLSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPS 415
+Q SL+ILES+ LNS + ++ +T+ L+ HLQ + IQ AIALINALF+KA
Sbjct: 190 LQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPED 249
Query: 416 KRKVISATMCSKQVRNAILTSVLQ 439
KR+ ++ K +R+ IL V++
Sbjct: 250 KRQDMANAFAQKHLRSIILNHVIR 273
>sp|Q96JJ3|ELMO2_HUMAN Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2
PE=1 SV=2
Length = 720
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 162/251 (64%), Gaps = 8/251 (3%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I+Q SL+ILES+ LN
Sbjct: 146 MLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSILQRSLAILESMVLN 203
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCS 120
S S + ++ +T+ L+ HLQ + IQ AIALINALF+KA KR+ ++
Sbjct: 204 SQ---SLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDMANAFAQ 260
Query: 121 KQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKEL 180
K +R+ IL V++ + EMAHQLYVLQ LT LLE+RM TKMDP DQ D I EL
Sbjct: 261 KHLRSIILNHVIR-GNRPIKTEMAHQLYVLQVLTFNLLEERMMTKMDPNDQAQRDIIFEL 319
Query: 181 RRVAF--EIDVIGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIY 238
RR+AF E D + ++++ Y KDYK LGF INPA DFT+TPPGMLALD M+Y
Sbjct: 320 RRIAFDAESDPSNAPGSGTEKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLY 379
Query: 239 FARNHPEAYTK 249
A+ H + Y +
Sbjct: 380 LAKVHQDTYIR 390
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 18/204 (8%)
Query: 246 AYTKQKATKKTLEGTAE---KVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVN 301
A + +A ++ +E T + RL + + LS+DV+ F+ +F+ +D VL
Sbjct: 78 AISPSRAARQLMERTQSSNMETRLDAMKELAKLSADVT------FATEFINMDGIIVLTR 131
Query: 302 HSQAGLCV------MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEI 355
++G + MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I
Sbjct: 132 LVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSI 189
Query: 356 VQASLSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPS 415
+Q SL+ILES+ LNS + ++ +T+ L+ HLQ + IQ AIALINALF+KA
Sbjct: 190 LQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPED 249
Query: 416 KRKVISATMCSKQVRNAILTSVLQ 439
KR+ ++ K +R+ IL V++
Sbjct: 250 KRQDMANAFAQKHLRSIILNHVIR 273
>sp|A4FUD6|ELMO2_BOVIN Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2
SV=1
Length = 720
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 162/251 (64%), Gaps = 8/251 (3%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I+Q SL+ILES+ LN
Sbjct: 146 MLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSILQRSLAILESMVLN 203
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCS 120
S S + ++ +T+ L+ HLQ + IQ AIALINALF+KA KR+ ++
Sbjct: 204 SQ---SLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDMANAFAQ 260
Query: 121 KQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKEL 180
K +R+ IL V++ + EMAHQLYVLQ LT LLE+RM TKMDP DQ D I EL
Sbjct: 261 KHLRSIILNHVIR-GNRPIKTEMAHQLYVLQVLTFNLLEERMMTKMDPNDQAQRDIIFEL 319
Query: 181 RRVAFEIDV--IGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIY 238
RR+AF+ D + ++++ Y KDYK LGF INPA DFT+TPPGMLALD M+Y
Sbjct: 320 RRIAFDADSDPSNAPGSGTEKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLY 379
Query: 239 FARNHPEAYTK 249
A+ H + Y +
Sbjct: 380 LAKVHQDTYIR 390
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 18/204 (8%)
Query: 246 AYTKQKATKKTLEGT---AEKVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVN 301
A + +A ++ +E T + + RL + + LS+DV+ F+ +F+ +D VL
Sbjct: 78 AISPSRAARQLMERTQSSSMETRLDAMKELAKLSADVT------FATEFINMDGIVVLTR 131
Query: 302 HSQAGLCV------MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEI 355
++G + MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I
Sbjct: 132 LVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSITFIKQIAGYVSQP--MVDVSI 189
Query: 356 VQASLSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPS 415
+Q SL+ILES+ LNS + ++ +T+ L+ HLQ + IQ AIALINALF+KA
Sbjct: 190 LQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPED 249
Query: 416 KRKVISATMCSKQVRNAILTSVLQ 439
KR+ ++ K +R+ IL V++
Sbjct: 250 KRQDMANAFAQKHLRSIILNHVIR 273
>sp|Q8BHL5|ELMO2_MOUSE Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2
PE=1 SV=1
Length = 732
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 162/263 (61%), Gaps = 20/263 (7%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I+Q SL+ILES+ LN
Sbjct: 146 MLAFTLTAFLELMDHGIVSWDMVSVTFIKQIAGYVSQP--MVDVSILQRSLAILESMVLN 203
Query: 61 SVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKV------- 113
S S + ++ +T+ L+ HLQ + IQ AIALINALF+KA KR+
Sbjct: 204 SQ---SLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDKHLNPLD 260
Query: 114 -----ISATMCSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDP 168
++ K +R+ IL V++ + EMAHQLYVLQ LT LLE+RM TKMDP
Sbjct: 261 LPVTDMANAFAQKHLRSIILNHVIR-GNRPIKTEMAHQLYVLQVLTFNLLEERMMTKMDP 319
Query: 169 QDQDAHDKIKELRRVAF--EIDVIGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTET 226
DQ D I ELRR+AF E D + ++++ Y KDYK LGF INPA DFT+T
Sbjct: 320 NDQAQRDIIFELRRIAFDAESDPSNVPGSGTEKRKAMYTKDYKMLGFTNHINPALDFTQT 379
Query: 227 PPGMLALDCMIYFARNHPEAYTK 249
PPGMLALD M+Y A+ H + Y +
Sbjct: 380 PPGMLALDNMLYLAKVHQDTYIR 402
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 18/183 (9%)
Query: 246 AYTKQKATKKTLEGT---AEKVRLSGLPDTDTLSSDVSGQVRLYFSIQFL-LDCFAVLVN 301
A + +A ++ +E T + + RL + + LS+DV+ F+ +F+ +D VL
Sbjct: 78 AVSPSRAARQLMERTQSSSMETRLDAMKELAKLSADVT------FATEFINMDGIIVLTR 131
Query: 302 HSQAGLCV------MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEI 355
++G + MLA L +F+ELMDHGIVSW+++ FIK +A +V+ P + + I
Sbjct: 132 LVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSVTFIKQIAGYVSQP--MVDVSI 189
Query: 356 VQASLSILESIALNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPS 415
+Q SL+ILES+ LNS + ++ +T+ L+ HLQ + IQ AIALINALF+KA
Sbjct: 190 LQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPED 249
Query: 416 KRK 418
KR+
Sbjct: 250 KRQ 252
>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3
PE=1 SV=2
Length = 720
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 154/252 (61%), Gaps = 12/252 (4%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 MLALGLRAFLELMEHGVVSWETLSISFVRKVISYVNMN--LMDASVQPLALRLLESVTLS 199
Query: 61 S--VGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATM 118
S +G+ V++ + L L++HLQ + +Q A+AL+ AL A P++RK + +
Sbjct: 200 SPALGQL-----VKSEVPLDRLLVHLQVMNHQLQTKAMALLTALLQGASPTERKEMLDHL 254
Query: 119 CSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIK 178
K +R I +++ S +G EMAH LYVLQ LTLGLLE RM T +DP Q+ D+++
Sbjct: 255 WKKNLRQFIYKNIIH-SATPMGDEMAHHLYVLQALTLGLLEPRMRTPLDPYSQEQRDQLQ 313
Query: 179 ELRRVAFEIDVIG-GVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMI 237
LR+ AFE + G S+ R+ ++++KLGF + NPAQD PPG+LALD M+
Sbjct: 314 ALRQAAFEPEGESLGTGLSADRRRSLCVREFRKLGFS-NSNPAQDLERVPPGLLALDNML 372
Query: 238 YFARNHPEAYTK 249
YF+R+ P AY++
Sbjct: 373 YFSRHAPSAYSR 384
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 310 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 369
MLA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 MLALGLRAFLELMEHGVVSWETLSISFVRKVISYVNMN--LMDASVQPLALRLLESVTLS 199
Query: 370 SVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCSKQV 429
S V++ + L L++HLQ + +Q A+AL+ AL A P++RK + + K +
Sbjct: 200 SPALGQLVKSEVPLDRLLVHLQVMNHQLQTKAMALLTALLQGASPTERKEMLDHLWKKNL 259
Query: 430 RNAILTSVLQ---PSGGQVS 446
R I +++ P G +++
Sbjct: 260 RQFIYKNIIHSATPMGDEMA 279
>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus
GN=Elmo3 PE=2 SV=1
Length = 720
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 154/252 (61%), Gaps = 12/252 (4%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
MLA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 MLALGLRAFLELMEHGVVSWETLSISFVRKVVSYVNMN--LMDASVQPLALRLLESVTLS 199
Query: 61 S--VGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATM 118
S +G+ V++ + L L++HLQ + +Q A+AL+ AL A P++RK + +
Sbjct: 200 SPTLGQL-----VKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGASPAERKDMLDCL 254
Query: 119 CSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIK 178
K +R I +++ S +G EMAH LYVLQ LTLGLLE RM T +DP Q+ ++++
Sbjct: 255 WKKNLRQFIYKNIIH-SAAPMGDEMAHHLYVLQALTLGLLEPRMRTPLDPYSQEQREQLQ 313
Query: 179 ELRRVAFEIDVIG-GVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMI 237
LR+ AFE D G S+ R+ ++++KLGF + +PAQD PPG+LALD M+
Sbjct: 314 ALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFS-NSSPAQDLERVPPGLLALDNML 372
Query: 238 YFARNHPEAYTK 249
YF+R+ P AY++
Sbjct: 373 YFSRHAPSAYSR 384
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 310 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 369
MLA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 MLALGLRAFLELMEHGVVSWETLSISFVRKVVSYVNMN--LMDASVQPLALRLLESVTLS 199
Query: 370 SVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCSKQV 429
S V++ + L L++HLQ + +Q A+AL+ AL A P++RK + + K +
Sbjct: 200 SPTLGQLVKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGASPAERKDMLDCLWKKNL 259
Query: 430 RNAILTSVLQ---PSGGQVS 446
R I +++ P G +++
Sbjct: 260 RQFIYKNIIHSAAPMGDEMA 279
>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3
PE=2 SV=3
Length = 720
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 153/252 (60%), Gaps = 12/252 (4%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
+LA L +F ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 VLALSLRAFSELMEHGVVSWETLSIPFVRKVVCYVNMN--LMDASVPPLALGLLESVTLS 199
Query: 61 S--VGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATM 118
S +G+ V++ + L L++HLQ + +Q A+AL+ AL A P +RK + +
Sbjct: 200 SPALGQL-----VKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGASPVERKHMLDYL 254
Query: 119 CSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIK 178
+ +R I +++ S +G EMAH LYVLQ L LGLLE RM T +DP Q+ ++++
Sbjct: 255 WQRNLRQFIYKNIIH-SAAPMGDEMAHHLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQ 313
Query: 179 ELRRVAFEID-VIGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMI 237
LR+ AFE++ G S+ R+ A++++KLGF + NPAQD PPG+LALD M+
Sbjct: 314 VLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFS-NSNPAQDLERVPPGLLALDNML 372
Query: 238 YFARNHPEAYTK 249
YF+RN P AY++
Sbjct: 373 YFSRNAPSAYSR 384
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 310 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 369
+LA L +F ELM+HG+VSW L F++ V +VN + + + +L +LES+ L+
Sbjct: 142 VLALSLRAFSELMEHGVVSWETLSIPFVRKVVCYVNMN--LMDASVPPLALGLLESVTLS 199
Query: 370 SVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCSKQV 429
S V++ + L L++HLQ + +Q A+AL+ AL A P +RK + + + +
Sbjct: 200 SPALGQLVKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGASPVERKHMLDYLWQRNL 259
Query: 430 RNAILTSVLQ---PSGGQVS 446
R I +++ P G +++
Sbjct: 260 RQFIYKNIIHSAAPMGDEMA 279
>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2
SV=1
Length = 652
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 155/254 (61%), Gaps = 16/254 (6%)
Query: 1 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 60
+LA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LE++ L+
Sbjct: 142 VLALALRAFLELMEHGVVSWETLSIPFVRKVVCYVNMN--LMDASVQPLALGLLENVTLS 199
Query: 61 S--VGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATM 118
S +G+ V++ + L L++HLQ + +Q A+AL+ AL A P++RK + +
Sbjct: 200 SPTLGQL-----VKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGATPAERKHMLDYL 254
Query: 119 CSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIK 178
+ +R I +++ S +G EMAH LYVLQ L LGLLE RM T +DP Q+ ++++
Sbjct: 255 WQRNLRQFIYKNIIH-SAAPLGDEMAHHLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQ 313
Query: 179 ELRRVAFEID---VIGGVDASSKRQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDC 235
LR+ AFE + V G+ A +R + A++++KLGF + NPAQD PPG+LALD
Sbjct: 314 ALRQAAFEPEGESVGAGLSADRRRSL--CAREFRKLGFS-NSNPAQDLERVPPGLLALDN 370
Query: 236 MIYFARNHPEAYTK 249
M+YF+R P AY++
Sbjct: 371 MLYFSRQAPSAYSR 384
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 310 MLAHCLLSFVELMDHGIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIALN 369
+LA L +F+ELM+HG+VSW L F++ V +VN + + + +L +LE++ L+
Sbjct: 142 VLALALRAFLELMEHGVVSWETLSIPFVRKVVCYVNMN--LMDASVQPLALGLLENVTLS 199
Query: 370 SVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKAEPSKRKVISATMCSKQV 429
S V++ + L L++HLQ + +Q A+AL+ AL A P++RK + + + +
Sbjct: 200 SPTLGQLVKSEVPLDRLLVHLQVMNQQLQTKAMALLTALLQGATPAERKHMLDYLWQRNL 259
Query: 430 RNAILTSVLQ---PSGGQVS 446
R I +++ P G +++
Sbjct: 260 RQFIYKNIIHSAAPLGDEMA 279
>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum
GN=elmoA PE=1 SV=1
Length = 977
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 139 VGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKELRRVAFEIDVIGGVDASSK 198
V E+ QLY+ Q ++ R N + + + + +L + + GV S+
Sbjct: 350 VAPELKRQLYIYQRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYP-----GVKLESR 404
Query: 199 RQMGGYAKDYKKLGFKYDINPAQDFTETPPGMLALDCMIYFARNHPEAYTK 249
++ +K++GF+ +P DF G+ LD +IYFA+N+ E + K
Sbjct: 405 -----VSEQWKQMGFQ-GTDPCTDFRAM--GIWGLDNLIYFAQNYNEKFRK 447
>sp|B8GV32|RL17_THISH 50S ribosomal protein L17 OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=rplQ PE=3 SV=1
Length = 134
Score = 33.9 bits (76), Expect = 3.0, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 135 SGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQDQDAHDKIKELRRVAFEIDVIGGVD 194
SG Q+ AH+ LQ +T L + P K KELRRVA + + VD
Sbjct: 6 SGRQLSRNSAHRKATLQNMTASLFRHEVIKTTLP-------KAKELRRVAEPLITLAKVD 58
Query: 195 ASSKRQMG--------GYAKDYKKLGFKYDINPA 220
KR++ K +++LG +Y P
Sbjct: 59 NVHKRRVAFARLRDKEMVGKLFQELGPRYQTRPG 92
>sp|Q8STE5|CED12_CAEEL Cell death abnormality protein 12 OS=Caenorhabditis elegans
GN=ced-12 PE=1 SV=1
Length = 731
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 310 MLAHCLLSFVELMDH--GIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIA 367
+L+ CL + +++ G +W + + ++A V E + A+L +LE +
Sbjct: 174 LLSTCLRALSSMLELAVGDFTWKSVPNDVVVSMASLVTGKAKREEANTLLAALQMLEQLV 233
Query: 368 LNSVGKFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKA-EPSKRKVISATMCS 426
+ + + + L+ H++ I A++L+N++ + + KR + ++
Sbjct: 234 IGDDTTRDWILEEVPIETLIRHVEKSDERIALCALSLMNSMIRRCPDDEKRFELIKSLEV 293
Query: 427 KQVRNAILTSVLQPSGG 443
RNA+ +S+L+ GG
Sbjct: 294 VPFRNAVHSSLLRGGGG 310
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Query: 1 MLAHCLLSFVELMDH--GIVSWNILETVFIKTVADHVNNPNPVPEKEIVQASLSILESIA 58
+L+ CL + +++ G +W + + ++A V E + A+L +LE +
Sbjct: 174 LLSTCLRALSSMLELAVGDFTWKSVPNDVVVSMASLVTGKAKREEANTLLAALQMLEQLV 233
Query: 59 LNSVGKFSQFSQVENHLTLTNLVMHLQNQSPIIQQNAIALINALFIKA-EPSKRKVISAT 117
+G + + + + L+ H++ I A++L+N++ + + KR + +
Sbjct: 234 ---IGDDTTRDWILEEVPIETLIRHVEKSDERIALCALSLMNSMIRRCPDDEKRFELIKS 290
Query: 118 MCSKQVRNAILTSVLQPSGGQVGAEMAHQLYVLQTLTLGLLEQRMNTKMDPQ-------D 170
+ RNA+ +S+L+ GG QL +Q + E T + Q
Sbjct: 291 LEVVPFRNAVHSSLLRGGGGVRNLNAIEQLVEVQRSLISAYETSPPTDAEVQKILDIESS 350
Query: 171 QDAHDKIKEL 180
+D ++I+E+
Sbjct: 351 EDVSEEIREM 360
>sp|Q4G384|RBCR_EMIHU Probable RuBisCO transcriptional regulator OS=Emiliania huxleyi
GN=rbcR PE=3 SV=1
Length = 314
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 225 ETPPGMLALDCMIYFARNH-----PEAY---TKQKATKKTLEGTAEKVRLSGLPDTDTLS 276
E PP + +I +A + P+A+ T Q K+ L ++R L T+
Sbjct: 154 EVPPELQGTLEIISYAEDELALIIPQAHPFATLQSIQKEDLY----RLRFIALDTQSTIR 209
Query: 277 SDV------SGQVRLYFSIQFLLDCFAVLVNHSQAGLCVMLAHCLLSFVELMDHGIVSWN 330
S + SG YF I+ L+ + N Q+GL + + + ++ GI+ W
Sbjct: 210 SVIENTLTQSGIDSRYFKIEMELNSIEAIKNAVQSGLGAAFV-SVSAISKELELGILHWA 268
Query: 331 ILETVFIKTVADHVNNP-----NPVP--EKEIVQASLS 361
+E V IK + NP NP+ EKEI++ L+
Sbjct: 269 KIEDVTIKRTLSILINPKRYYANPIKNFEKEIMEILLT 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,971,879
Number of Sequences: 539616
Number of extensions: 5971646
Number of successful extensions: 14738
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 14665
Number of HSP's gapped (non-prelim): 31
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)