Query psy13790
Match_columns 193
No_of_seqs 111 out of 184
Neff 5.9
Searched_HMMs 46136
Date Fri Aug 16 20:36:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13790.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13790hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05018 DUF667: Protein of un 100.0 4E-78 8.6E-83 500.4 22.0 190 1-190 1-190 (190)
2 KOG3213|consensus 100.0 3.5E-77 7.7E-82 494.6 17.6 189 1-189 1-189 (238)
3 COG4552 Eis Predicted acetyltr 40.4 79 0.0017 29.3 5.9 89 73-172 278-384 (389)
4 cd08159 APC10-like APC10-like 38.9 1.1E+02 0.0025 23.9 6.0 81 75-165 38-126 (129)
5 PF08770 SoxZ: Sulphur oxidati 33.8 1.2E+02 0.0025 22.6 5.1 30 72-102 66-95 (100)
6 cd08366 APC10 APC10 subunit of 31.2 2.6E+02 0.0057 22.0 7.5 62 73-135 39-103 (139)
7 PF15034 KRTAP7: KRTAP type 7 28.4 37 0.0008 24.5 1.4 20 106-125 19-38 (87)
8 PF12204 DUF3598: Domain of un 27.7 2.5E+02 0.0053 24.2 6.7 23 84-106 214-236 (252)
9 PF01745 IPT: Isopentenyl tran 25.6 19 0.0004 31.2 -0.6 43 139-181 20-75 (233)
10 PF12735 Trs65: TRAPP traffick 21.0 2E+02 0.0043 25.5 5.0 42 68-109 155-196 (306)
11 PRK00031 lolA lipoprotein chap 20.3 4.5E+02 0.0097 20.9 7.0 32 84-115 147-178 (195)
12 PRK00153 hypothetical protein; 20.1 92 0.002 23.1 2.3 26 150-175 38-63 (104)
No 1
>PF05018 DUF667: Protein of unknown function (DUF667); InterPro: IPR007714 This family of proteins are highly conserved in eukaryotes. Some proteins in the family are annotated as transcription factors. However, there is currently no support for this in the literature.
Probab=100.00 E-value=4e-78 Score=500.39 Aligned_cols=190 Identities=67% Similarity=1.202 Sum_probs=187.0
Q ss_pred CCcccccCCeEEEEEecCCChhhhhhhhccCCcEEEeeccccceeEEEEEcCCcceeeEEcCCCCCcccceeecEEEEEE
Q psy13790 1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFISCPADPKKTLGIKLPFLVMII 80 (193)
Q Consensus 1 Mf~~~~Q~g~~~lf~s~g~~Pl~~W~~~~~~G~V~~v~D~~iks~V~~i~G~~~~~t~I~~P~~~~~sLgl~~p~L~lq~ 80 (193)
||+|+||+||++||+|+|++||++|++++++|+|+|++|+||||+|+||+|.++++|||+||++++++|||++|||+|++
T Consensus 1 Mf~n~~Q~gf~~i~~s~g~~pl~~W~~~~~~G~V~rv~D~~iks~V~ei~G~~~~~t~I~~P~~~~~sLGl~~pfL~li~ 80 (190)
T PF05018_consen 1 MFKNTYQGGFVSIFYSQGSKPLQIWKKHVKNGHVKRVFDKDIKSYVLEIQGSNSATTYITCPKDPKQSLGLKQPFLVLIF 80 (190)
T ss_pred CccccccCCEEEEEEcCCCCcHHHhhhhccCCeEEEEeccccceEEEEEeccccccCeEECCCCcccccceeecEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccEEEEEEEEeCCCcEEEEEEEeeeeeeeecCcEEEecCcCCCCceEEEeeHHHHHHHHhCcceeeEeeEEEeeee
Q psy13790 81 KNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYIETLRVQIHANC 160 (193)
Q Consensus 81 k~l~k~F~~ei~i~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~l~~~~~~t~y~~~~~i~I~anc 160 (193)
||++++|+|||+|+|+++++|||++||++++++++|+||++||.+.++|++|+|||+++++.+||++|.++.+|+|||||
T Consensus 81 k~l~k~F~~ei~I~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~~~~~~y~~~~~~sl~i~I~anc 160 (190)
T PF05018_consen 81 KPLGKYFSFEIDITDDKNNRRRFRFSNFQKETKVTPFHCQIPLRLSPGWNNLQIDLADLTRRAYGTNYFESLRIQICANC 160 (190)
T ss_pred ecCCCcEEEEEEEEeCCCCEEEEEEeeeeccccccccEEEcccccCCCcEEEEEEHHHHHHHHhccCceEEEEEEEecCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred eeeeeeecCCCCCCCCCcccceeeeecccc
Q psy13790 161 RIRRVYFSDRLYSEDELPAEFKLFLPIQNK 190 (193)
Q Consensus 161 rlRrIf~sd~~y~~~elP~e~~l~~~~~~~ 190 (193)
|||||||||++|+++|||+||+|+.|.+++
T Consensus 161 rlRrIyfsD~ly~~~elp~~~~l~~~~~~~ 190 (190)
T PF05018_consen 161 RLRRIYFSDRLYSEDELPPEFKLYLPKQEK 190 (190)
T ss_pred EEEEEEecCccCChhhCchhhEEccccCCC
Confidence 999999999999999999999999998753
No 2
>KOG3213|consensus
Probab=100.00 E-value=3.5e-77 Score=494.55 Aligned_cols=189 Identities=75% Similarity=1.253 Sum_probs=186.9
Q ss_pred CCcccccCCeEEEEEecCCChhhhhhhhccCCcEEEeeccccceeEEEEEcCCcceeeEEcCCCCCcccceeecEEEEEE
Q psy13790 1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIVGTNVSTTFISCPADPKKTLGIKLPFLVMII 80 (193)
Q Consensus 1 Mf~~~~Q~g~~~lf~s~g~~Pl~~W~~~~~~G~V~~v~D~~iks~V~~i~G~~~~~t~I~~P~~~~~sLgl~~p~L~lq~ 80 (193)
||+|+||+||+++|||+|++|+++|++.+++|+|++++|+||||.|+||+|+|.++||||||++.+++|||++|||||++
T Consensus 1 mfkn~~q~gfl~il~s~g~~pl~~Wk~~~k~g~I~r~~Dkdiks~V~~i~GSns~tt~Iq~Pke~kqsLGi~~~fLvlli 80 (238)
T KOG3213|consen 1 MFKNTYQSGFLSILYSFGSKPLQEWKKSVKNGHIKRITDKDIKSLVLEIEGSNSSTTYIQCPKESKQSLGIKLPFLVLLI 80 (238)
T ss_pred CccccccccceehhhhhccCcHHHhhhhccCceeEEeeccccceeEEEEeccccccceEECCcccccccCccceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccEEEEEEEEeCCCcEEEEEEEeeeeeeeecCcEEEecCcCCCCceEEEeeHHHHHHHHhCcceeeEeeEEEeeee
Q psy13790 81 KNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYIETLRVQIHANC 160 (193)
Q Consensus 81 k~l~k~F~~ei~i~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~l~~~~~~t~y~~~~~i~I~anc 160 (193)
|||+|||+||++|+|++|.+|||++||+|+|+++||+||+|||.|++|||+||+||+++|+++||++|.|+.+|+|||||
T Consensus 81 k~m~K~F~~el~I~d~~N~~rR~~~Sn~~ke~~~kp~~~~mPl~m~~~W~~iqlnL~dft~~~~~~~y~etl~iql~Anc 160 (238)
T KOG3213|consen 81 KNMKKYFSFELQILDDKNVRRRFRASNFQKETSVKPFICTMPLVMDAGWNQIQLNLADFTRRAYGTNYGETLSIQLHANC 160 (238)
T ss_pred eccccceEEEEEEecCCceEEEEEeeccchhhcccceEEecceEecCcceeEEeeHHHHHHHHhccceeeEEEEEEecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeecCCCCCCCCCcccceeeeeccc
Q psy13790 161 RIRRVYFSDRLYSEDELPAEFKLFLPIQN 189 (193)
Q Consensus 161 rlRrIf~sd~~y~~~elP~e~~l~~~~~~ 189 (193)
|||||||.|++|+++|+|.+|+++.+.++
T Consensus 161 riRriyf~~kl~~~~e~~~~frlm~rf~~ 189 (238)
T KOG3213|consen 161 RIRRIYFADKLYSEAELPLEFRLMLRFQV 189 (238)
T ss_pred EEEEEEeccccCChhhCCCcceEcccccC
Confidence 99999999999999999999999988664
No 3
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=40.45 E-value=79 Score=29.35 Aligned_cols=89 Identities=17% Similarity=0.231 Sum_probs=61.2
Q ss_pred ecEEEEEEEe-------cC-----ccEEEEEEEEeCCCcEEEEEEEeeeeeeeecCcEEEecCcCCCCceEEEeeHHHHH
Q psy13790 73 LPFLVMIIKN-------LK-----KYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLADFT 140 (193)
Q Consensus 73 ~p~L~lq~k~-------l~-----k~F~~ei~i~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~l~ 140 (193)
+||.-|.+.| .| -.+.++..|.|+ +..||++++..+..++|++-+. --|.+|.+.|.
T Consensus 278 qp~mmlRIvnv~~~l~~~g~~~~~~e~~i~leVld~--N~G~fsL~~g~~~~kmT~~~~~---------~ei~idi~~L~ 346 (389)
T COG4552 278 QPFMMLRIVNVQAALEARGYPHEVGEFEIVLEVLDE--NGGRFSLKEGDGRAKMTETDAA---------AEIEIDIDVLG 346 (389)
T ss_pred CCceEEEEccHHHHHHhCCCCCcCcceEEEEEeecc--CCCeEEeecccccccccccccc---------ceeeeeHHHHH
Confidence 5777777755 22 258888999998 7889999999888888765432 45789999999
Q ss_pred HHHhCcceee----EeeEEE--eeeeeeeeeeecCCCC
Q psy13790 141 RRAYGTNYIE----TLRVQI--HANCRIRRVYFSDRLY 172 (193)
Q Consensus 141 ~~~~~t~y~~----~~~i~I--~ancrlRrIf~sd~~y 172 (193)
+.++|..+.+ +-.|++ .+=-||+.||-+|.+|
T Consensus 347 ~Ly~gyf~~~~L~~~gkl~~ke~~l~rl~qifa~~~p~ 384 (389)
T COG4552 347 SLYTGYFTASTLAAAGKLRTKESQLLRLDQIFASDVPV 384 (389)
T ss_pred HHHhccccHHHHHHhcCcCCcHHHHHHHHHHhccCCch
Confidence 9999854332 223322 2224566677766654
No 4
>cd08159 APC10-like APC10-like DOC1 domains in E3 ubiquitin ligases that mediate substrate ubiquitination. This family contains the single domain protein, APC10, a subunit of the anaphase-promoting complex (APC), as well as the DOC1 domain of multi-domain proteins present in E3 ubiquitin ligases. E3 ubiquitin ligases mediate substrate ubiquitination (or ubiquitylation), a component of the ubiquitin-26S proteasome pathway for selective proteolytic degradation. The APC, a multi-protein complex (or cyclosome), is a cell cycle-regulated, E3 ubiquitin ligase that controls important transitions in mitosis and the G1 phase by ubiquitinating regulatory proteins, thereby targeting them for degradation. APC10-like DOC1 domains such as those present in HECT (Homologous to the E6-AP Carboxyl Terminus) and Cullin-RING (Really Interesting New Gene) E3 ubiquitin ligase proteins, HECTD3, and CUL7, respectively, are also included in this hierarchy. CUL7 is a member of the Cullin-RING ligase family and f
Probab=38.95 E-value=1.1e+02 Score=23.91 Aligned_cols=81 Identities=15% Similarity=0.241 Sum_probs=49.3
Q ss_pred EEEEEE-EecC-ccEEEEEEEEeCCCcEEEEEEEeeeeeeeecCcEEEecCcCCCCceEEEeeHHHHHHHHhCcceeeEe
Q psy13790 75 FLVMII-KNLK-KYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYIETL 152 (193)
Q Consensus 75 ~L~lq~-k~l~-k~F~~ei~i~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~idL~~l~~~~~~t~y~~~~ 152 (193)
++.+++ |... +..++.++..|++=.-.++.+.--...-.. .....+.+....||..|..|. .-+-...
T Consensus 38 ~i~l~f~k~v~i~~l~i~~~~~DeSYtP~~I~V~~G~~~~dL-~e~~~v~l~~p~Gwv~i~~~~---------~~~~~~i 107 (129)
T cd08159 38 WIRLFMKKDVLIRVLAIFVDMADSSYMPSLVVVYGGHSPSDL-RELKDVNIRPSNGWVALLEDD---------TLKCPYI 107 (129)
T ss_pred EEEEEEcCCcEEEEEEEEecCCCCCcCCcEEEEEecCCHHHh-heeEEEEecCCCceEEEEcCC---------cEEEEEE
Confidence 566666 3332 566777777888888888876544332111 124566677779999986654 2334455
Q ss_pred eEEEeee------eeeeee
Q psy13790 153 RVQIHAN------CRIRRV 165 (193)
Q Consensus 153 ~i~I~an------crlRrI 165 (193)
+|.|-+| ||||.|
T Consensus 108 qI~I~~nhqnG~DthiRgi 126 (129)
T cd08159 108 EIRIKRCRSDGIDTRIRGL 126 (129)
T ss_pred EEEEHHhccCCccceeeEE
Confidence 6666543 677755
No 5
>PF08770 SoxZ: Sulphur oxidation protein SoxZ; InterPro: IPR014880 SoxZ forms an anti parallel beta structure and forms a complex with SoxY. Sulphur oxidation occurs at the thiol of a conserved cysteine residue of the SoxY subunit []. ; PDB: 1V8H_B 2OX5_E 2OXG_E 2OXH_C.
Probab=33.77 E-value=1.2e+02 Score=22.58 Aligned_cols=30 Identities=27% Similarity=0.258 Sum_probs=23.8
Q ss_pred eecEEEEEEEecCccEEEEEEEEeCCCcEEE
Q psy13790 72 KLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR 102 (193)
Q Consensus 72 ~~p~L~lq~k~l~k~F~~ei~i~D~~~~~rR 102 (193)
.-|||-+.+++-+.- .+++...|+++....
T Consensus 66 ~NP~l~F~~~~~~~g-~l~v~~~Dn~G~~~~ 95 (100)
T PF08770_consen 66 ENPYLRFSFKGKKSG-TLTVTWTDNKGNSFS 95 (100)
T ss_dssp SS-EEEEEEEESSSE-EEEEEEEETTS-EEE
T ss_pred CCCcEEEEEecCCCc-EEEEEEEECCCCEEE
Confidence 459999999998777 999999999998753
No 6
>cd08366 APC10 APC10 subunit of the anaphase-promoting complex (APC) that mediates substrate ubiquitination. This model represents the single domain protein APC10, a subunit of the anaphase-promoting complex (APC), which is a multi-subunit E3 ubiquitin ligase. E3 ubiquitin ligases mediate substrate ubiquitination (or ubiquitylation), a vital component of the ubiquitin-26S proteasome pathway for selective proteolytic degradation. The APC (also known as the cyclosome), is a cell cycle-regulated E3 ubiquitin ligase that controls important transitions in mitosis and the G1 phase by ubiquitinating regulatory proteins, thereby targeting them for degradation. In mitosis, the APC initiates sister chromatid separation by ubiquitinating the anaphase inhibitor securin and triggers exit from mitosis by ubiquitinating cyclin B. The C-terminus of APC10 binds to CDC27/APC3, an APC subunit that contains multiple tetratrico peptide repeats. APC10 domains are homologous to the DOC1 domains present in the
Probab=31.24 E-value=2.6e+02 Score=22.02 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=40.0
Q ss_pred ecEEEEEE-Eec-CccEEEEEEE-EeCCCcEEEEEEEeeeeeeeecCcEEEecCcCCCCceEEEee
Q psy13790 73 LPFLVMII-KNL-KKYFTFEVQV-LDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFN 135 (193)
Q Consensus 73 ~p~L~lq~-k~l-~k~F~~ei~i-~D~~~~~rR~~~Sn~~k~~~~~~~~~~iPl~l~~~W~~l~id 135 (193)
-.++.+++ |.. -+..++-++. .|++-.-.++.+.--...-..+ ....+.+....||..+.+.
T Consensus 39 PH~I~i~f~k~~~i~~l~i~vd~~~DeSYtP~~I~v~~G~~~~dl~-e~~~v~l~~p~Gwv~i~l~ 103 (139)
T cd08366 39 PHLINIQFSKKTDISAVALYLDYKLDESYTPSKISIRAGTSPHDLQ-EVRTVELEEPNGWVHIPLE 103 (139)
T ss_pred CEEEEEEecCCcEEEEEEEEEccCCCCCCCCEEEEEEEECCcCchh-heEEEEcCCCCEEEEEEcc
Confidence 45566666 333 3677788887 8888888888876554432221 2456666666899888543
No 7
>PF15034 KRTAP7: KRTAP type 7 family
Probab=28.36 E-value=37 Score=24.54 Aligned_cols=20 Identities=30% Similarity=0.740 Sum_probs=18.0
Q ss_pred EeeeeeeeecCcEEEecCcC
Q psy13790 106 SNYQSTTRVKPFICTMPMRL 125 (193)
Q Consensus 106 Sn~~k~~~~~~~~~~iPl~l 125 (193)
+|++..++++|+-|-+||..
T Consensus 19 tnfh~t~ratplncvvplgs 38 (87)
T PF15034_consen 19 TNFHGTFRATPLNCVVPLGS 38 (87)
T ss_pred ccccceeecccceEEEECCC
Confidence 58899999999999999964
No 8
>PF12204 DUF3598: Domain of unknown function (DUF3598); InterPro: IPR022017 Proteins containing this domain are found in bacteria and eukaryotes and contain a barrel structure similar to that seen in the lipocalin superfamily. ; PDB: 2O62_B.
Probab=27.68 E-value=2.5e+02 Score=24.23 Aligned_cols=23 Identities=39% Similarity=0.456 Sum_probs=20.2
Q ss_pred CccEEEEEEEEeCCCcEEEEEEE
Q psy13790 84 KKYFTFEVQVLDDKNVRRRFRAS 106 (193)
Q Consensus 84 ~k~F~~ei~i~D~~~~~rR~~~S 106 (193)
+|.|.+|+.=+-..+.++|+.-+
T Consensus 214 ~~~F~lev~Wl~~~~~~qrlir~ 236 (252)
T PF12204_consen 214 GKSFFLEVGWLESPNQRQRLIRS 236 (252)
T ss_dssp TS-EEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEEEEEcCCeeEEEEEE
Confidence 79999999999999999999875
No 9
>PF01745 IPT: Isopentenyl transferase; InterPro: IPR002648 Isopentenyl transferase / dimethylallyl transferase synthesizes isopentenyladensosine 5'-monophosphate, a cytokinin that induces shoot formation on host plants infected with the Ti plasmid [].; GO: 0004161 dimethylallyltranstransferase activity, 0009058 biosynthetic process; PDB: 2ZE8_C 2ZE5_A 2ZE7_A 2ZE6_A.
Probab=25.61 E-value=19 Score=31.25 Aligned_cols=43 Identities=28% Similarity=0.322 Sum_probs=22.9
Q ss_pred HHHHHhCcceeeEeeEEEeeeee-------------eeeeeecCCCCCCCCCcccc
Q psy13790 139 FTRRAYGTNYIETLRVQIHANCR-------------IRRVYFSDRLYSEDELPAEF 181 (193)
Q Consensus 139 l~~~~~~t~y~~~~~i~I~ancr-------------lRrIf~sd~~y~~~elP~e~ 181 (193)
-+++-+|..-..+|+|++|+... +||||+.|+.-++..++++.
T Consensus 20 ~lA~~~g~pvI~~Driq~y~~l~v~Sgrp~~~el~~~~RiyL~~r~l~~G~i~a~e 75 (233)
T PF01745_consen 20 ALAQKTGAPVISLDRIQCYPELSVGSGRPTPSELKGTRRIYLDDRPLSDGIINAEE 75 (233)
T ss_dssp HHHHHH--EEEEE-SGGG-GGGTTTTT---SGGGTT-EEEES----GGG-S--HHH
T ss_pred HHHHHhCCCEEEecceecccccccccCCCCHHHHcccceeeeccccccCCCcCHHH
Confidence 34455567777788888877653 79999999999999988874
No 10
>PF12735 Trs65: TRAPP trafficking subunit Trs65; InterPro: IPR024662 This family is one of the subunits of the TRAPP Golgi trafficking complex []. TRAPP subunits are found in two different sized complexes, TRAPP I and TRAPP II. While both complexes contain the same seven subunits, Bet3p, Bet5p, Trs20p, Trs23p, Trs31p, Trs33p and Trs85p, with TRAPPC human equivalents, TRAPP II has the additional three subunits ,Trs65p, Trs120p and Trs130p []. While it has been implicated in cell wall biogenesis and stress response, the role of Trs65 in TRAPP II is supported by the findings that the protein co-localises with Trs130p, and deletion of TRS65 in yeast leads to a conditional lethal phenotype if either one of the other TRAPP II-specific subunits is modified []. Furthermore, the trs65 mutant has reduced Ypt31/32p guanine nucleotide exchange, GEF, activity []. Trs65 is also known as killer toxin-resistance protein 11.
Probab=21.00 E-value=2e+02 Score=25.50 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=35.5
Q ss_pred ccceeecEEEEEEEecCccEEEEEEEEeCCCcEEEEEEEeee
Q psy13790 68 TLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQ 109 (193)
Q Consensus 68 sLgl~~p~L~lq~k~l~k~F~~ei~i~D~~~~~rR~~~Sn~~ 109 (193)
..|++.-|..=.-...|+.|+.+|.|.-.+...|+|.+.=-.
T Consensus 155 ~~gv~~sF~gp~~V~~Ge~F~w~v~ivN~S~~~r~L~l~~~~ 196 (306)
T PF12735_consen 155 LSGVTFSFSGPSSVKVGEPFSWKVFIVNRSSSPRKLALYVPP 196 (306)
T ss_pred ccCeEEEEeCCceEecCCeEEEEEEEEECCCCCeeEEEEecC
Confidence 349998888885467899999999999999999999986444
No 11
>PRK00031 lolA lipoprotein chaperone; Reviewed
Probab=20.29 E-value=4.5e+02 Score=20.89 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=25.9
Q ss_pred CccEEEEEEEEeCCCcEEEEEEEeeeeeeeec
Q psy13790 84 KKYFTFEVQVLDDKNVRRRFRASNYQSTTRVK 115 (193)
Q Consensus 84 ~k~F~~ei~i~D~~~~~rR~~~Sn~~k~~~~~ 115 (193)
+....-.+.+.|.+|.+.++.|++........
T Consensus 147 ~~~~i~~i~i~d~~g~~t~i~f~~~~~n~~l~ 178 (195)
T PRK00031 147 RNGTLASFSLVDQDGQRTLITFSNIQKNPALD 178 (195)
T ss_pred CCCeEEEEEEEcCCCCEEEEEecccccCCCCC
Confidence 45666779999999999999999988765543
No 12
>PRK00153 hypothetical protein; Validated
Probab=20.09 E-value=92 Score=23.09 Aligned_cols=26 Identities=15% Similarity=0.321 Sum_probs=22.9
Q ss_pred eEeeEEEeeeeeeeeeeecCCCCCCC
Q psy13790 150 ETLRVQIHANCRIRRVYFSDRLYSED 175 (193)
Q Consensus 150 ~~~~i~I~ancrlRrIf~sd~~y~~~ 175 (193)
-+.+|.+.+++.|++|-..+.++.++
T Consensus 38 G~V~V~v~G~~~v~~i~Id~~ll~~~ 63 (104)
T PRK00153 38 GLVKVTMTGKKEVKRVKIDPSLVDPE 63 (104)
T ss_pred CeEEEEEecCceEEEEEECHHHcCCc
Confidence 37899999999999999999998644
Done!