BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13791
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
GN=CG3714 PE=2 SV=2
Length = 555
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
LMATNAARYR+ AG++V LLEFGLRRAQGPDGGLSASKY+Y GGFDGTSNVLAGK++NIP
Sbjct: 159 LMATNAARYRMVAGKHVKLLEFGLRRAQGPDGGLSASKYSYTGGFDGTSNVLAGKLFNIP 218
Query: 63 VRGTHAHAYITSFNGLNELQLKVSSH 88
V+GTHAHAYITSF+ + EL+ ++ H
Sbjct: 219 VKGTHAHAYITSFSSIGELKTRLIKH 244
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans
GN=Y54G2A.17 PE=2 SV=3
Length = 562
Score = 127 bits (318), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR+R A+G + LLEFGLRRAQGP+GGL+ASKY Y GGFD TSNVLAGK+Y IP
Sbjct: 162 LVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIGGFDATSNVLAGKLYGIP 221
Query: 63 VRGTHAHAYITSFNGLNELQLKVSSHDV 90
V+GT AH++I SF+ EL++++ +H +
Sbjct: 222 VKGTQAHSFICSFSSPAELKVRLLNHKI 249
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum
GN=naprt PE=2 SV=1
Length = 589
Score = 117 bits (294), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 67/79 (84%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR+RLA G+ +LEFGLRRAQGPDG +SAS+Y+Y GG DGTSNVLA + IP
Sbjct: 193 LVATNAARHRLAVGKEKVMLEFGLRRAQGPDGAMSASRYSYLGGADGTSNVLAHCFFGIP 252
Query: 63 VRGTHAHAYITSFNGLNEL 81
+RGTHAH++IT+++G +EL
Sbjct: 253 IRGTHAHSFITNYSGPDEL 271
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2
SV=2
Length = 546
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 64/79 (81%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ +NAAR+RLAAG L+E GLRRAQGPDGGL+AS+Y Y GGFD TSN LAG++Y IP
Sbjct: 146 LVCSNAARFRLAAGPRRRLMEMGLRRAQGPDGGLTASRYTYIGGFDLTSNALAGRLYGIP 205
Query: 63 VRGTHAHAYITSFNGLNEL 81
V GT AH+YITSF+ L E+
Sbjct: 206 VAGTMAHSYITSFSSLEEV 224
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2
SV=2
Length = 538
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 62/75 (82%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR RL AG + LLE GLRRAQGPDGGL+AS Y+Y GGFD +SNVLAG++ +P
Sbjct: 147 LIATNAARLRLIAGPDKRLLEMGLRRAQGPDGGLTASTYSYLGGFDASSNVLAGQLRGVP 206
Query: 63 VRGTHAHAYITSFNG 77
V GT AH+++TSF+G
Sbjct: 207 VAGTLAHSFVTSFSG 221
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1
SV=2
Length = 538
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR RL AG LLE GLRRAQGPDGGL+AS Y+Y GGFD +SNVLAG++ +P
Sbjct: 147 LVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVP 206
Query: 63 VRGTHAHAYITSFNG 77
V GT AH+++TSF+G
Sbjct: 207 VAGTLAHSFVTSFSG 221
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2
SV=1
Length = 538
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR RL AG + LLE GLRRAQGPDGG +AS Y+Y GGFD +SN LAG++ +P
Sbjct: 147 LVATNAARLRLIAGPDKKLLEMGLRRAQGPDGGFTASIYSYLGGFDSSSNTLAGQLRGVP 206
Query: 63 VRGTHAHAYITSFNG 77
V GT AH+++TSF+G
Sbjct: 207 VAGTLAHSFVTSFSG 221
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1
PE=2 SV=1
Length = 538
Score = 102 bits (255), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+ATNAAR RL AG + LLE GLRRAQGPDGG +AS Y+Y GGFD +SN LAG++ +P
Sbjct: 147 LVATNAARLRLIAGPDKRLLEMGLRRAQGPDGGFTASIYSYLGGFDSSSNTLAGQLRGVP 206
Query: 63 VRGTHAHAYITSFNG 77
V GT AH++ITSF G
Sbjct: 207 VAGTLAHSFITSFLG 221
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain
168) GN=pncB PE=3 SV=1
Length = 490
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 3 LMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIP 62
L+AT AAR + G V+L EFG RRA D + ++ A GGF TSNV AGK +NIP
Sbjct: 141 LIATKAARIKGVIGDEVAL-EFGTRRAHEMDAAMWGARAALIGGFSATSNVRAGKRFNIP 199
Query: 63 VRGTHAHAYITSF 75
V GTHAHA + ++
Sbjct: 200 VSGTHAHALVQAY 212
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium
tuberculosis GN=pncB2 PE=2 SV=1
Length = 463
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 16 GRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSF 75
GR V ++FG RRA G D ++ +Y G GTSN+LA + Y IP GT AH+++ +F
Sbjct: 151 GRPV--VDFGARRAHGTDAACKVARTSYLAGAAGTSNLLAARQYGIPTFGTMAHSFVQAF 208
Query: 76 N 76
+
Sbjct: 209 D 209
>sp|Q9HJ28|PNCB_THEAC Putative nicotinate phosphoribosyltransferase OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=Ta1145 PE=1 SV=1
Length = 392
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 MATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPV 63
++T A++ RLAAG + FG+RR P + AY GG DG S +L K+ +
Sbjct: 119 ISTKASKVRLAAG-DSPFFSFGIRRMH-PAISPMIDRSAYIGGADGVSGILGAKLIDQDP 176
Query: 64 RGTHAHA 70
GT HA
Sbjct: 177 VGTMPHA 183
>sp|Q6F6W1|PNCB_ACIAD Nicotinate phosphoribosyltransferase OS=Acinetobacter sp. (strain
ADP1) GN=pncB PE=3 SV=1
Length = 407
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 23 EFGLRRA---QGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLN 79
+FG RR + ++A + + F GTSNVL K NI GT AH ++ +F L+
Sbjct: 179 DFGTRRRYSFEWQKHVIAAFHHHFPNIFRGTSNVLLAKELNITPIGTMAHEFLQAFQALD 238
>sp|A3MA25|PNCB_ACIBT Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=pncB PE=3 SV=2
Length = 404
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLN 79
F GTSNVL K NI GT AH ++ +F L+
Sbjct: 203 FRGTSNVLLAKELNITPIGTMAHEFLQAFQALD 235
>sp|B2I1P1|PNCB_ACIBC Nicotinate phosphoribosyltransferase OS=Acinetobacter baumannii
(strain ACICU) GN=pncB PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLN 79
F GTSNVL K NI GT AH ++ +F L+
Sbjct: 203 FRGTSNVLLAKELNITPIGTMAHEFLQAFQALD 235
>sp|B0RVE9|PNCB_XANCB Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=pncB PE=3 SV=1
Length = 398
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ +F L
Sbjct: 192 FVGTSNVFFAKQYGLTPLGTMAHEYLQAFQAL 223
>sp|Q8PCP3|PNCB_XANCP Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=pncB PE=3 SV=1
Length = 398
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ +F L
Sbjct: 192 FVGTSNVFFAKQYGLTPLGTMAHEYLQAFQAL 223
>sp|Q4UQS8|PNCB_XANC8 Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=pncB PE=3 SV=1
Length = 398
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ +F L
Sbjct: 192 FVGTSNVFFAKQYGLTPLGTMAHEYLQAFQAL 223
>sp|Q9UTK3|NPT1_SCHPO Probable nicotinate phosphoribosyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1486.06 PE=3 SV=1
Length = 410
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 20 SLLEFGLRRAQGP-------DGGLSASK-YAYAGGFDGTSNVLAGKMYNIPVRGTHAHAY 71
+ +FG RR + P G + A + + G F GTSNV YN+ V GT AH +
Sbjct: 166 AFTDFGTRRRRDPHTQEIVLQGLMKAQEDFKGPGSFLGTSNVYFAAKYNLNVSGTVAHEW 225
>sp|Q8PGU5|PNCB_XANAC Nicotinate phosphoribosyltransferase OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=pncB PE=3 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ +F L
Sbjct: 192 FVGTSNVYFAKQYGLTPLGTMAHEYLQAFQAL 223
>sp|Q3BPD5|PNCB_XANC5 Nicotinate phosphoribosyltransferase OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=pncB PE=3 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ +F L
Sbjct: 192 FVGTSNVYFAKQYGLTPLGTMAHEYLQAFQAL 223
>sp|Q10641|PNCB1_MYCTU Nicotinate phosphoribosyltransferase pncB1 OS=Mycobacterium
tuberculosis GN=pncB1 PE=3 SV=2
Length = 448
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 4 MATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPV 63
+A+ AAR AAG L+E G RR ++A++ AY GF +SN+ A + Y +P
Sbjct: 149 IASAAARMVSAAG-GRPLIEMGSRRTHE-RAAVAAARAAYIAGFAASSNLAAQRRYGVPA 206
Query: 64 RGTHAHAY 71
GT AHA+
Sbjct: 207 HGTAAHAF 214
>sp|Q9PED1|PNCB_XYLFA Nicotinate phosphoribosyltransferase OS=Xylella fastidiosa (strain
9a5c) GN=pncB PE=3 SV=1
Length = 394
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
Query: 9 ARYRLAAGRN----VSLLEFGLRRA---QGPDGGLSASKYAYAGGFDGTSNVLAGKMYNI 61
A+ RL G + S+ ++G RR Q L F GTSNV K Y
Sbjct: 151 AKVRLLKGESGYEECSIADYGTRRRYSRQWHAELLPLLAQGLGSNFVGTSNVYFAKQYGY 210
Query: 62 PVRGTHAHAYITSFNGL 78
GT AH Y+ +F L
Sbjct: 211 TPLGTMAHEYLQAFQAL 227
>sp|Q87EC4|PNCB_XYLFT Nicotinate phosphoribosyltransferase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=pncB PE=3 SV=1
Length = 394
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y GT AH Y+ +F L
Sbjct: 196 FVGTSNVYFAKQYGYTPLGTMAHEYLQAFQAL 227
>sp|Q89SS3|PNCB_BRAJA Nicotinate phosphoribosyltransferase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=pncB PE=3 SV=1
Length = 434
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 12 RLAAGRNVSLLEFGLRRAQG---PDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHA 68
RL N+ L +FG RR G + A K F GTSNVL ++ GT+A
Sbjct: 182 RLRKLENLRLSDFGTRRRHGFLWQRWCVEAVKEGLGPSFIGTSNVLLAMDNDLEAIGTNA 241
Query: 69 H 69
H
Sbjct: 242 H 242
>sp|C0QFM5|PNCB_DESAH Nicotinate phosphoribosyltransferase OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=pncB PE=3 SV=1
Length = 389
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 7 NAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYA---GGFDGTSNVLAGKMYNIPV 63
N + ++ + N+ +FG RR G + + A GTSNV +++NI
Sbjct: 146 NLNKAKILSCNNIRYADFGTRRRFSSSGHEALIRDILALEHNTLIGTSNVNLARLFNIKP 205
Query: 64 RGTHAHAYITSFNGLN 79
GT AH +I LN
Sbjct: 206 IGTMAHEWIMFHGVLN 221
>sp|Q98D24|PNCB_RHILO Nicotinate phosphoribosyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=pncB PE=3 SV=1
Length = 434
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 8 AARYRLAAGRNVSLLEFGLRRAQG---PDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVR 64
A RL A + + +FG RR + A K F GTSNVL ++
Sbjct: 178 AKTERLKALPGIRISDFGTRRRHSFLWQRWCVEALKEGIGEAFTGTSNVLLAMDNDLEAL 237
Query: 65 GTHAHAYITSFNGL--NELQLKVSSHDV 90
GT+AH F L +E +LK + + V
Sbjct: 238 GTNAHELPMVFAALANSEKELKQAPYKV 265
>sp|A4YK54|PNCB_BRASO Nicotinate phosphoribosyltransferase OS=Bradyrhizobium sp. (strain
ORS278) GN=pncB PE=3 SV=1
Length = 434
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 12 RLAAGRNVSLLEFGLRRAQG---PDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHA 68
RL + L +FG RR G + A K F GTSNVL ++ GT+A
Sbjct: 182 RLRKLEGLRLSDFGTRRRHGFLWQRWCVEAVKEGLGSSFTGTSNVLLAMDNDLEAIGTNA 241
Query: 69 H 69
H
Sbjct: 242 H 242
>sp|Q1QI14|PNCB_NITHX Nicotinate phosphoribosyltransferase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=pncB PE=3 SV=1
Length = 434
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 12 RLAAGRNVSLLEFGLRRAQG---PDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHA 68
RL ++ L +FG RR G + A+K F GTSNVL ++ GT+A
Sbjct: 182 RLRKLDDLWLSDFGTRRRHGFLWQRWCVEAAKEGLGPAFTGTSNVLLAMDNDLEAIGTNA 241
Query: 69 H 69
H
Sbjct: 242 H 242
>sp|Q6G5H6|PNCB_BARHE Nicotinate phosphoribosyltransferase OS=Bartonella henselae (strain
ATCC 49882 / Houston 1) GN=pncB PE=3 SV=1
Length = 434
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 12 RLAAGRNVSLLEFGLRRAQG---PDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHA 68
RL N+ + +FG RR + A K F GTSNVL ++ GT+A
Sbjct: 182 RLKKLPNIKISDFGTRRRHSFLWQRWCVEALKEGIGNSFTGTSNVLLAMDTDLEALGTNA 241
Query: 69 H 69
H
Sbjct: 242 H 242
>sp|A4G168|PNCB_HERAR Nicotinate phosphoribosyltransferase OS=Herminiimonas
arsenicoxydans GN=pncB PE=3 SV=1
Length = 397
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 47 FDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
F GTSNV K Y + GT AH Y+ ++
Sbjct: 199 FTGTSNVHLAKKYGLTPIGTMAHEYLQAYQSF 230
>sp|Q7NSK2|PNCB_CHRVO Nicotinate phosphoribosyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=pncB PE=3 SV=1
Length = 402
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 14 AAGRNVSLL--EFGLRRAQGPDGG---LSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHA 68
A G+ LL +FG RR D + +A F GTSNV + I GT A
Sbjct: 166 APGQRFPLLIADFGTRRRFSRDWQAHVVERLNHALPQVFRGTSNVYLARKLGITPIGTMA 225
Query: 69 HAYITSFNGL 78
H + +F L
Sbjct: 226 HEFFQAFQAL 235
>sp|A9IIC5|PNCB_BORPD Nicotinate phosphoribosyltransferase OS=Bordetella petrii (strain
ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=pncB PE=3 SV=1
Length = 391
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 23 EFGLRRAQGP---DGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78
E+G RR + +S K F GTSNVL +N+ GT H Y+ + L
Sbjct: 167 EYGTRRRFSKLWHEEIVSTMKAQMGAHFAGTSNVLLAMRHNVLPLGTMGHEYLQACQAL 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,646,207
Number of Sequences: 539616
Number of extensions: 1174444
Number of successful extensions: 2305
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2280
Number of HSP's gapped (non-prelim): 38
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)