Query psy13791
Match_columns 90
No_of_seqs 105 out of 1088
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 20:37:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3os4_A Naprtase, nicotinate ph 100.0 8.6E-29 2.9E-33 194.7 7.5 82 2-84 148-244 (407)
2 4hl7_A Naprtase, nicotinate ph 99.9 5.9E-28 2E-32 191.9 5.4 80 5-84 161-254 (446)
3 2im5_A Nicotinate phosphoribos 99.9 4.8E-27 1.6E-31 183.7 5.4 80 2-84 146-235 (394)
4 1yir_A Naprtase 2, nicotinate 99.9 1.4E-26 4.7E-31 181.8 5.4 83 2-84 152-249 (408)
5 1ybe_A Naprtase, nicotinate ph 99.9 8.3E-26 2.8E-30 179.3 5.1 82 2-85 181-276 (449)
6 1vlp_A Naprtase, nicotinate ph 99.9 2.8E-25 9.7E-30 175.9 6.5 79 2-83 170-266 (441)
7 2f7f_A Nicotinate phosphoribos 99.9 2.7E-24 9.3E-29 172.2 6.2 85 1-86 138-222 (494)
8 2i14_A Nicotinate-nucleotide p 99.9 1.8E-23 6.1E-28 163.4 7.0 83 1-85 118-200 (395)
9 3dhf_A Nicotinamide phosphorib 99.9 1.9E-23 6.4E-28 167.3 3.7 82 2-85 159-265 (484)
10 2i1o_A Nicotinate phosphoribos 99.9 9.2E-23 3.2E-27 159.6 6.0 82 1-85 122-203 (398)
11 2b7n_A Probable nicotinate-nuc 99.0 1.1E-10 3.7E-15 87.0 3.2 77 1-86 100-176 (273)
12 2jbm_A Nicotinate-nucleotide p 98.9 2.4E-10 8.2E-15 86.3 1.7 76 1-85 113-190 (299)
13 3c2e_A Nicotinate-nucleotide p 98.8 9.1E-10 3.1E-14 83.0 2.1 76 1-85 115-192 (294)
14 1qap_A Quinolinic acid phospho 98.5 1.1E-08 3.7E-13 77.3 -0.2 71 1-73 127-201 (296)
15 3paj_A Nicotinate-nucleotide p 98.5 1.9E-07 6.6E-12 71.6 5.8 77 1-86 150-226 (320)
16 3gnn_A Nicotinate-nucleotide p 98.3 6E-07 2E-11 68.3 4.7 77 1-86 128-204 (298)
17 3tqv_A Nicotinate-nucleotide p 97.1 0.00046 1.6E-08 52.1 4.4 48 1-50 117-164 (287)
18 1x1o_A Nicotinate-nucleotide p 96.8 0.00074 2.5E-08 50.6 3.5 49 1-51 114-162 (286)
19 3l0g_A Nicotinate-nucleotide p 96.6 0.0022 7.5E-08 48.8 4.3 46 1-48 126-171 (300)
20 1o4u_A Type II quinolic acid p 96.0 0.0043 1.5E-07 46.5 3.3 47 1-51 113-159 (285)
21 1qpo_A Quinolinate acid phosph 95.9 0.0077 2.6E-07 45.0 4.3 47 1-49 113-159 (284)
22 3b8z_A Protein adamts-5; alpha 29.1 4 0.00014 28.1 -2.4 20 57-76 135-154 (217)
23 2glo_A Brinker CG9653-PA; prot 24.1 71 0.0024 17.1 2.8 49 25-76 1-50 (59)
24 2ppw_A Conserved domain protei 20.2 1.9E+02 0.0065 20.6 5.0 33 9-43 103-138 (216)
25 1ns5_A Hypothetical protein YB 20.2 24 0.00081 23.9 0.2 33 42-75 100-135 (155)
No 1
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.95 E-value=8.6e-29 Score=194.71 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHh-----CCCCceeEecCCCCCChhhH--HHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHh
Q psy13791 2 LLMATNAARYRLAA-----GRNVSLLEFGLRRAQGPDGG--LSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITS 74 (90)
Q Consensus 2 s~iAtka~ri~~aA-----~~~~~v~~fG~RR~~~~~~~--~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~ 74 (90)
|+||||++||+.+| + +++|+|||+||+|++++| +..++++++|||+|||||++|++||+||+|||||||||+
T Consensus 148 s~iatKa~r~~~aa~~~~~~-~~~~~eFGtRR~~s~~~q~~v~~~~~a~iggf~GTSNv~aa~~~gi~~~GT~AHs~i~~ 226 (407)
T 3os4_A 148 QQLRTKLEQFNALSADIDIT-HFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQA 226 (407)
T ss_dssp HHHHHHHHHHHHHTTTSCCT-TCCEEECCSTTCSCHHHHHHHHHHHHHHCTTEEEESBHHHHHHHTCCBCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccC-CCeEEecccccccCHHHHHHHHHHHHHHhCCceeEhHHHHHHHcCCCCccccHHHHHHh
Confidence 78999999999987 5 799999999999998854 667788899999999999999999999999999999999
Q ss_pred hC--------CHHHHHhh
Q psy13791 75 FN--------GLNELQLK 84 (90)
Q Consensus 75 ~~--------~~~~a~~~ 84 (90)
|+ ++.+|++.
T Consensus 227 ~~~~~~~~~~~e~~Af~~ 244 (407)
T 3os4_A 227 HQQISPTLANSQRVALQV 244 (407)
T ss_dssp HTTTSSSGGGHHHHHHHH
T ss_pred hccccccccccHHHHHHH
Confidence 98 67777643
No 2
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.94 E-value=5.9e-28 Score=191.88 Aligned_cols=80 Identities=23% Similarity=0.236 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhC----CCCceeEecCCCCCChh---hHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhh--
Q psy13791 5 ATNAARYRLAAG----RNVSLLEFGLRRAQGPD---GGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSF-- 75 (90)
Q Consensus 5 Atka~ri~~aA~----~~~~v~~fG~RR~~~~~---~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~-- 75 (90)
+||++||+.+|+ ++++|+|||+||+|+++ .++.++|++++|||+|||||++|++||+||+|||||||||+|
T Consensus 161 ~tKa~rl~~aA~~~~~~~~~l~eFGtRR~~s~~~Q~~~v~~~raa~iggf~GTSNv~aa~~~gip~~GT~AH~~i~~~~a 240 (446)
T 4hl7_A 161 KTKLDQLKAEIERRGINNFSLTEMGTRRRFSSQVQRDVLACLKQEIPQWVLGTSNYHFAREFDLKPIGTIAHEWFMGHQA 240 (446)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEECCSTTCSCHHHHHHHHHHHHHHCGGGEEEESBHHHHHHHTCCBCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccCCCeEEecccccccChHHHHHHHHHHHHHhhCCCEeEhHHHHHHHcCCCCcccchhHHHHHhhc
Confidence 399999999886 37999999999999975 557788999999999999999999999999999999999999
Q ss_pred -----CCHHHHHhh
Q psy13791 76 -----NGLNELQLK 84 (90)
Q Consensus 76 -----~~~~~a~~~ 84 (90)
+++.+|+..
T Consensus 241 l~~~~~~e~~Af~~ 254 (446)
T 4hl7_A 241 LVNERDSQQVALER 254 (446)
T ss_dssp HSCGGGHHHHHHHH
T ss_pred ccccCCCHHHHHHH
Confidence 678777654
No 3
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.93 E-value=4.8e-27 Score=183.73 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=73.8
Q ss_pred hhHHHHHHHHHHHhCCCCceeEecCCCCCChhhH---HHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCC-
Q psy13791 2 LLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGG---LSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNG- 77 (90)
Q Consensus 2 s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~---~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~- 77 (90)
++|+||++|+ +++ +++|+|||+||+|+++++ +.++|++++|||+|||||+++++||+|++|||||||||+|++
T Consensus 146 ~~iatka~r~--a~~-~~~l~dFG~RR~~~~~~~~~~~~~~ra~~~~gf~GTSNv~aa~~~gi~~~GT~aHs~i~~~~~~ 222 (394)
T 2im5_A 146 EVTRSKGELM--REH-RATFSIFGMRRRFSLEVEDRVTDILKQYAGESLFGTSNVHLAHKHGLRVSGTHPHEWIQFHGAI 222 (394)
T ss_dssp HHHHHHHHHH--HHT-TCCEEECCSTTCSCHHHHHHHHHHHHHHSGGGEEEESBHHHHHHHTCEECCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHH--hCC-CCEEEEcCCcccccHHHHHHHHHHHHHHhhCCeeeeehHHHHHHcCCCCCccchhHHHHHhccc
Confidence 7899999997 666 799999999999998877 999999999999999999999999999999999999999987
Q ss_pred ------HHHHHhh
Q psy13791 78 ------LNELQLK 84 (90)
Q Consensus 78 ------~~~a~~~ 84 (90)
+.+|+..
T Consensus 223 ~~~~~~e~~A~~~ 235 (394)
T 2im5_A 223 YGYKMANYVAMED 235 (394)
T ss_dssp HCTTTHHHHHHHH
T ss_pred cccchHHHHHHHH
Confidence 7777654
No 4
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.93 E-value=1.4e-26 Score=181.81 Aligned_cols=83 Identities=20% Similarity=0.184 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHHhC----CCCceeEecCCCCCChhhHHHHHH--HHhc-CcchhhhhHHHHHhcCCCCccchhhHHHHh
Q psy13791 2 LLMATNAARYRLAAG----RNVSLLEFGLRRAQGPDGGLSASK--YAYA-GGFDGTSNVLAGKMYNIPVRGTHAHAYITS 74 (90)
Q Consensus 2 s~iAtka~ri~~aA~----~~~~v~~fG~RR~~~~~~~~~~~r--aa~i-gG~~gtSnv~~a~~~gl~~~GTmaH~~iq~ 74 (90)
++||||++||+++|+ .+++|+|||+||+|+++++..+.+ ++++ +||+|||||+++++||+|++|||||||||+
T Consensus 152 ~~iatK~~rl~~aa~~~~~~~~~l~dFG~RR~~~~~~~~~~~~~~~a~l~~gf~GTSNv~aa~~~gi~~~GT~aHs~i~~ 231 (408)
T 1yir_A 152 ERLQEKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMA 231 (408)
T ss_dssp HHHHHHHHHHHTTSCHHHHTTCEEEECCSTTCSCHHHHHHHHHHHHHHCSSEEEEESBHHHHHHTTCCBCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhhcccccCCCeEEEecCcccccHHHHHHHHHHHHHHhcCCceeEehHHHHHHcCCCccccchhHHHHH
Confidence 689999999987764 269999999999999998777777 6778 899999999999999999999999999999
Q ss_pred hC--------CHHHHHhh
Q psy13791 75 FN--------GLNELQLK 84 (90)
Q Consensus 75 ~~--------~~~~a~~~ 84 (90)
|+ ++.+|+..
T Consensus 232 ~~~~~~~~~~~e~~A~~~ 249 (408)
T 1yir_A 232 HQQLGPRLIDSQSAALDC 249 (408)
T ss_dssp HHHHSBCGGGHHHHHHHH
T ss_pred hccccccccchHHHHHHH
Confidence 98 67777654
No 5
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.92 E-value=8.3e-26 Score=179.29 Aligned_cols=82 Identities=21% Similarity=0.141 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHH--HHhc-CcchhhhhHHHHHhcCCCCccchhhHHHHhhCC-
Q psy13791 2 LLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASK--YAYA-GGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNG- 77 (90)
Q Consensus 2 s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~r--aa~i-gG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~- 77 (90)
++|+||++|+ .+++ +++|+|||+||+|+++++..+.+ ++++ +||+|||||+++++||+|++|||||||||+|++
T Consensus 181 ~~iatka~r~-~~a~-~~~l~dFG~RR~~s~~~~~~~~r~~aa~l~~gf~GTSNv~aa~~ygi~~~GT~aHs~i~~~~~~ 258 (449)
T 1ybe_A 181 AKMWEKVERL-RELP-GLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNAHELPMVVAAL 258 (449)
T ss_dssp HHHHHHHHHH-TTCT-TCCEEECCTTTCSCHHHHHHHHHHHHHHHGGGEEEESBHHHHHHHTCCBCCCCCTHHHHHHHHH
T ss_pred HHHHHHHHHH-hccC-CCeEEecCCcccCcHHHHHHHHHHHHHHhcCCceeeehHHHHHHcCCCCcccchhHHHHHhccc
Confidence 7899999999 5666 79999999999999999988888 8888 999999999999999999999999999999986
Q ss_pred ----------HHHHHhhh
Q psy13791 78 ----------LNELQLKV 85 (90)
Q Consensus 78 ----------~~~a~~~~ 85 (90)
|.+|++..
T Consensus 259 ~~~~~~~~~~e~~Af~~~ 276 (449)
T 1ybe_A 259 AQTNEELAAAPYQVLKDW 276 (449)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHH
Confidence 67777543
No 6
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.91 E-value=2.8e-25 Score=175.93 Aligned_cols=79 Identities=23% Similarity=0.236 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHHhCCCCceeEecCCCCCChhh---HHHHHHHH-------hcCcchhhhhHHHHHhcCCCCccchhhHH
Q psy13791 2 LLMATNAARYRLAAGRNVSLLEFGLRRAQGPDG---GLSASKYA-------YAGGFDGTSNVLAGKMYNIPVRGTHAHAY 71 (90)
Q Consensus 2 s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~---~~~~~raa-------~igG~~gtSnv~~a~~~gl~~~GTmaH~~ 71 (90)
++||||++|++ ++ +++|+|||+||+|++++ ++..++++ ++|||+|||||+++++||+||+|||||||
T Consensus 170 ~~iatka~r~~--a~-~~~l~dFG~RR~~~~~~q~~a~~~~~a~~~~~~~~~iggf~GTSNv~aa~~ygi~~~GT~aHs~ 246 (441)
T 1vlp_A 170 EQAEKKAETLF--DN-GIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTVAHEW 246 (441)
T ss_dssp HHHHHHHHHHH--HT-TCCEEECCSTTCSCHHHHHHHHHHHHHHHHHSHHHHTTTEEEESBHHHHHHHTCCBCCCCCHHH
T ss_pred HHHHHHHHHhc--cC-CCeEEecCCCCcCChHHHHHHHHHHHhhhcccccceeeeEEeechHHHHHHcCCCCcccchhHH
Confidence 78999999988 45 79999999999999877 45555554 89999999999999999999999999999
Q ss_pred HHhhCC--------HHHHHh
Q psy13791 72 ITSFNG--------LNELQL 83 (90)
Q Consensus 72 iq~~~~--------~~~a~~ 83 (90)
||+|++ +.+|++
T Consensus 247 i~~~~~~~~~~~~~e~~Af~ 266 (441)
T 1vlp_A 247 VMGVASISEDYLHANKNAMD 266 (441)
T ss_dssp HHHHHHHHTCCTTHHHHHHH
T ss_pred HHHhcccccccchhHHHHHH
Confidence 999976 777664
No 7
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=99.90 E-value=2.7e-24 Score=172.15 Aligned_cols=85 Identities=46% Similarity=0.670 Sum_probs=80.2
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
+|+||||++|++++++ +++++|||+||+++++.+....|++++|||.||||+.++++||+++.|||||+|||+|+++.+
T Consensus 138 ~S~IAT~a~r~v~aa~-~~~v~~fgtRr~~~~~~a~~~~raa~~gG~~gtsn~~~~k~~gi~~~GT~aHs~i~~~g~~~~ 216 (494)
T 2f7f_A 138 QTLIATKAARIKSVIG-DDPLLEFGTRRAQELDAAIWGTRAAYIGGADATSNVRAGKIFGIPVSGTHAHSLVQSYGNDYE 216 (494)
T ss_dssp HHHHHHHHHHHHHHHT-TSCEEECCGGGSSSHHHHHHHHHHHHHHTCCEESCHHHHHHHCCCBCCCCCHHHHHHHTSHHH
T ss_pred HHHHHHHHHHHHHHhC-CCceEEeccCCCCcHHHHHHHhHHHHhCCcccchhHHHHHHcCCCccCccchHHHHhcccHHH
Confidence 4899999999999998 799999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy13791 81 LQLKVS 86 (90)
Q Consensus 81 a~~~~~ 86 (90)
|+.+..
T Consensus 217 A~~~~~ 222 (494)
T 2f7f_A 217 AFMAYA 222 (494)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886543
No 8
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=99.88 E-value=1.8e-23 Score=163.38 Aligned_cols=83 Identities=29% Similarity=0.352 Sum_probs=78.8
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
+|+||||++|++++++ ++++.+||+||++ |.......||+++|||.+|||++++++|+++++|||+|+|||+|+++.+
T Consensus 118 ~SgIAT~a~r~v~aa~-~~~~~~fgtRrt~-p~~~~~~~~A~~iGG~~~tsn~l~~~~~~~~~~GT~~H~~i~~~g~~~~ 195 (395)
T 2i14_A 118 ASGIATAALRIKIAAK-FKPVYSFGIRHMH-PAIAPMIDRAAFIGGCDGVSGVLGAEMMGEKAVGTMPHALIITVGDQVK 195 (395)
T ss_dssp HHHHHHHHHHHHHHTT-TCCEEECGGGGSC-GGGHHHHHHHHHHTTCSEESBHHHHHHHTCCCCCCCCHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEcCCCCC-HHHHHHHHHHHhcCCceecchHHHHHhcCCCCCCchhhHHHHhcCCHHH
Confidence 4899999999999998 7999999999998 8999999999999999999999999999999999999999999999988
Q ss_pred HHhhh
Q psy13791 81 LQLKV 85 (90)
Q Consensus 81 a~~~~ 85 (90)
|+.+.
T Consensus 196 A~~~~ 200 (395)
T 2i14_A 196 AWKYF 200 (395)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87554
No 9
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=99.87 E-value=1.9e-23 Score=167.31 Aligned_cols=82 Identities=24% Similarity=0.280 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHh------------CCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccc---
Q psy13791 2 LLMATNAARYRLAA------------GRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGT--- 66 (90)
Q Consensus 2 s~iAtka~ri~~aA------------~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GT--- 66 (90)
|+||||++|++.++ ..+++++|||+||+|+++.+.... +++++||+||||| +|++||+|++||
T Consensus 159 s~vAT~A~r~~~~~~~~~~~t~~~~~~~~~~l~dFG~Rr~~~~~~a~~~~-aa~i~gf~GTSnv-aa~~~gi~~~GT~~~ 236 (484)
T 3dhf_A 159 ITVATNSREQKKILAKYLLETSGNLDGLEYKLHDFGYRGVSSQETAGIGA-SAHLVNFKGTDTV-AGLALIKKYYGTKDP 236 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCTTGGGSEEECCTTTSSCHHHHHHHH-HHHTTTCCBBSBT-HHHHHHHHHTCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccCCCeEEecCCCcccchHHHHHHH-HHHhcCCceEhhH-HHHHhCCCcCCCccc
Confidence 78999999999862 227999999999999987765555 8999999999999 999999999999
Q ss_pred --------hhhHHHHhhC--CHHHHHhhh
Q psy13791 67 --------HAHAYITSFN--GLNELQLKV 85 (90)
Q Consensus 67 --------maH~~iq~~~--~~~~a~~~~ 85 (90)
|||||+|+|+ +|.+||+..
T Consensus 237 ~~g~SipA~aHs~i~~~g~~~E~~Af~~~ 265 (484)
T 3dhf_A 237 VPGYSVPAAEHSTITAWGKDHEKDAFEHI 265 (484)
T ss_dssp CSCBCCCBCCHHHHHTTCGGGHHHHHHHH
T ss_pred cccccccccchHHHHhcCCchHHHHHHHH
Confidence 9999999994 888888654
No 10
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=99.87 E-value=9.2e-23 Score=159.58 Aligned_cols=82 Identities=32% Similarity=0.456 Sum_probs=76.6
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
+|+||||++|++++++ ++++.+||+||++ |.......||+++|||.+|||++++++|+++++|||+|+|||+|++ .+
T Consensus 122 ~SgIAT~a~r~v~aa~-~~~~~~fgtRrt~-p~~~~~~~~A~~iGG~~~tsn~l~~~~~~~~~~GT~~H~~i~~~g~-~~ 198 (398)
T 2i1o_A 122 ASGISTKASKVRLAAG-DSPFFSFGIRRMH-PAISPMIDRSAYIGGADGVSGILGAKLIDQDPVGTMPHALSIMLGD-EE 198 (398)
T ss_dssp HHHHHHHHHHHHHHHT-TSCEEECCGGGSC-GGGHHHHHHHHHHTTCSEECCHHHHHHHTSCCCCCCCHHHHHHHCH-HH
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEecCCCCC-HHHHHHHHHHHhcCCceeechHHHHHHcCCCcccchhhHHHHhcCC-HH
Confidence 4899999999999998 7999999999998 8999999999999999999999999999999999999999999987 66
Q ss_pred HHhhh
Q psy13791 81 LQLKV 85 (90)
Q Consensus 81 a~~~~ 85 (90)
|+.+.
T Consensus 199 A~~~~ 203 (398)
T 2i1o_A 199 AWKLT 203 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66443
No 11
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=99.02 E-value=1.1e-10 Score=87.00 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=66.8
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
||+||||++|++++++ +.++..||+|+.+ |.......|++++||+.+++|....+.+ ++. + | +++++++.+
T Consensus 100 ~SgIAT~t~~~v~a~~-~~~~~~~~tRkt~-p~~r~~~~~A~~~gG~~~hr~~l~d~vl-ik~--~--H--i~~~g~~~~ 170 (273)
T 2b7n_A 100 SSGIATLTSRFVEALN-SHKVRLLDTRKTR-PLLRIFEKYSVLNGGASNHRLGLDDALM-LKD--T--H--LRHVKDLKS 170 (273)
T ss_dssp HHHHHHHHHHHHHHHC-CSSSEEECCSCCC-TTCHHHHHHHHHTTTCCCCCSSTTTCEE-ECH--H--H--HTTCSSHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEcCCCC-hhhHHHHHHHHHhCCCcceEcCccceEE-eeC--C--H--HHHhCCHHH
Confidence 5899999999999998 7899999999988 7899999999999999999999988877 555 2 7 688888888
Q ss_pred HHhhhc
Q psy13791 81 LQLKVS 86 (90)
Q Consensus 81 a~~~~~ 86 (90)
+..+..
T Consensus 171 ai~~~r 176 (273)
T 2b7n_A 171 FLTHAR 176 (273)
T ss_dssp HHHHHG
T ss_pred HHHHHH
Confidence 776544
No 12
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=98.92 E-value=2.4e-10 Score=86.31 Aligned_cols=76 Identities=20% Similarity=0.138 Sum_probs=65.7
Q ss_pred ChhHHHHHHHHHHHhCCCCc--eeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCH
Q psy13791 1 MLLMATNAARYRLAAGRNVS--LLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~--v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~ 78 (90)
||+||||++|++++++ +.+ +..||+|+.+ |.......|++++||+.+++|....+.+ ++. + | +++++++
T Consensus 113 ~SgIAT~t~~~v~a~~-~~~~~~~~~~tRkt~-p~~r~~e~~A~~~GG~~~hr~~l~d~vl-ik~--~--H--i~~~g~~ 183 (299)
T 2jbm_A 113 CSGIASAAAAAVEAAR-GAGWTGHVAGTRKTT-PGFRLVEKYGLLVGGAASHRYDLGGLVM-VKD--N--H--VVAAGGV 183 (299)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCSEEECCSCCC-TTCHHHHHHHHHHTTCBCCCCSTTSSEE-ECH--H--H--HHHHTSH
T ss_pred HHHHHHHHHHHHHHhc-CCCCceEEeecCCCC-hhhHHHHHHHHHHCCCCceecCccceEE-ecc--c--H--HHHcCCH
Confidence 5899999999999998 677 9999999988 7999999999999999999999887777 555 2 6 6888888
Q ss_pred HHHHhhh
Q psy13791 79 NELQLKV 85 (90)
Q Consensus 79 ~~a~~~~ 85 (90)
.++..+.
T Consensus 184 ~~ai~~~ 190 (299)
T 2jbm_A 184 EKAVRAA 190 (299)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777554
No 13
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.83 E-value=9.1e-10 Score=82.97 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=63.9
Q ss_pred ChhHHHHHHHHHHHhCCCCc--eeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCH
Q psy13791 1 MLLMATNAARYRLAAGRNVS--LLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGL 78 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~--v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~ 78 (90)
||+||||++|++++++ +.+ +..||+|+.+ |.......|++++||+.+++|....+.+ ..++ |. ++++++
T Consensus 115 ~SgIAT~t~~~v~aa~-~~~~~~~~~~tRkt~-p~~r~~e~~A~~~GG~~~hr~~l~d~vl---ik~n--h~--~~~g~i 185 (294)
T 3c2e_A 115 SSGIATASHKIISLAR-STGYKGTIAGTRKTT-PGLRRLEKYSMLVGGCDTHRYDLSSMVM---LKDN--HI--WATGSI 185 (294)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCSEEECCSCCC-TTCHHHHHHHHHHTTCBCCCCSTTTSEE---ECHH--HH--HHHSSH
T ss_pred HHHHHHHHHHHHHHhc-CCCCceEEEecCCCC-hhHHHHHHHHHHhCCCCceecCccceEE---eecc--hh--hhcCCH
Confidence 5899999999999998 677 9999999988 7899999999999999999999887766 3444 42 777888
Q ss_pred HHHHhhh
Q psy13791 79 NELQLKV 85 (90)
Q Consensus 79 ~~a~~~~ 85 (90)
.++..+.
T Consensus 186 ~~ai~~~ 192 (294)
T 3c2e_A 186 TNAVKNA 192 (294)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777554
No 14
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.51 E-value=1.1e-08 Score=77.33 Aligned_cols=71 Identities=15% Similarity=0.100 Sum_probs=63.0
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhc----CCCCccchhhHHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMY----NIPVRGTHAHAYIT 73 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~----gl~~~GTmaH~~iq 73 (90)
||+||||+++++++++ +.++..|++|+.+ |.......+++++||+..++|.+..+.+ .++..|||..++-.
T Consensus 127 ~SgIAT~t~~~v~~~~-gt~v~i~~tRkt~-P~~r~~e~~Av~~GG~~~hr~~l~d~vlikdnhi~~~Gti~~ai~~ 201 (296)
T 1qap_A 127 LSGVASEVRRYVGLLA-GTQTQLLDTRKTL-PGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEK 201 (296)
T ss_dssp HHHHHHHHHHHHHTTT-TSSCEEECCSCCC-TTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEeCCCC-cccHHHHHHHHHHCCchhhccccccEEEEEcCCeeccCCHHHHHHH
Confidence 5899999999999998 7999999999887 7899999999999999999999988876 67778999766543
No 15
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.47 E-value=1.9e-07 Score=71.60 Aligned_cols=77 Identities=14% Similarity=0.026 Sum_probs=63.8
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
||+|||++++++++++ +.++..|+||+.+ |......-||.++||... ..+|+...-.+-+..|.+++++.+
T Consensus 150 ~SGIAT~t~~~v~aa~-g~~~~i~~TRKT~-PglR~l~kyAV~~GGg~n-------HR~gL~d~vlikdnHi~~~G~i~~ 220 (320)
T 3paj_A 150 LSGCATATARYVQELK-GTQCRLLDTRKTI-PGLRSALKYAVACGGGYN-------HRIGVFDAYLIKENHIIACGGIRQ 220 (320)
T ss_dssp HHHHHHHHHHHHHHHT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCBC-------CCSSSSSCEEECHHHHHHHTSHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEeecCCC-ccchHHHhhhHHhcCccc-------eecccchhhccHHHHHHHhCCHHH
Confidence 6999999999999998 7999999999877 788889999999999875 456666555554455899999999
Q ss_pred HHhhhc
Q psy13791 81 LQLKVS 86 (90)
Q Consensus 81 a~~~~~ 86 (90)
|+.+..
T Consensus 221 Av~~ar 226 (320)
T 3paj_A 221 AISTAK 226 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 986543
No 16
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.30 E-value=6e-07 Score=68.27 Aligned_cols=77 Identities=13% Similarity=0.048 Sum_probs=50.1
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhhhHHHHHhcCCCCccchhhHHHHhhCCHHH
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTSNVLAGKMYNIPVRGTHAHAYITSFNGLNE 80 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtSnv~~a~~~gl~~~GTmaH~~iq~~~~~~~ 80 (90)
||+|||++++++++++ +.++..|+||+.+ |......-||..+||... +.+|++-...+-+..|.+++++.+
T Consensus 128 ~SGIAT~t~~~v~a~~-g~~~~i~~TRKt~-Pglr~l~kyAv~~GGg~n-------HR~gL~d~vlikdNHi~~~G~i~~ 198 (298)
T 3gnn_A 128 LSGVASATRQYVDRIA-DTRARILDTRKTL-PGLRLAQKYAVRVGGGAN-------QRLALYAGILIKENHIAAAGGVGE 198 (298)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCCEECCSCCC-TTCHHHHHHHHHHTTCCC-------C-------------------CHHH
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEecCCC-cchHHHHHhhHHhcCccc-------eecCCCcEEEEeHHHHHHcCCHHH
Confidence 6999999999999998 7899999999876 788888999999999865 346777777787778888889888
Q ss_pred HHhhhc
Q psy13791 81 LQLKVS 86 (90)
Q Consensus 81 a~~~~~ 86 (90)
|+.+..
T Consensus 199 Av~~~r 204 (298)
T 3gnn_A 199 ALDAAF 204 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886543
No 17
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.11 E-value=0.00046 Score=52.12 Aligned_cols=48 Identities=15% Similarity=0.007 Sum_probs=42.6
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhh
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGT 50 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gt 50 (90)
||+|||++++++++++ +.++.-++||..+ |......-||..+||...+
T Consensus 117 ~SGIAT~t~~~v~~~~-g~~~~i~dTRKT~-PglR~l~kyAV~~GGg~nH 164 (287)
T 3tqv_A 117 LSGTATVTNKLVKLIS-QYKTKLLDTRKTI-PGFRLAQKYAVRCGGGFNH 164 (287)
T ss_dssp HHHHHHHHHHHHHHHT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEeecccC-cchHHHHHHHHHhcCchhe
Confidence 6999999999999998 7899999999876 7888889999999987544
No 18
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.84 E-value=0.00074 Score=50.64 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=42.1
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhh
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTS 51 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtS 51 (90)
||+|||++++++++++ +.++.-++||..+ |......-||..+||....+
T Consensus 114 ~SGIAT~t~~~v~~~~-~~~~~i~~TRKt~-Pglr~~~kyAv~~GGg~nHR 162 (286)
T 1x1o_A 114 LSGIATLTRAYVEALA-GTKAQILDTRKTT-PGLRALEKYAVRVGGGRNHR 162 (286)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCEEECCSCCC-TTCHHHHHHHHHHHTCBCCC
T ss_pred HhHHHHHHHHHHHHhc-CCCcEEEEcCCCC-hhhHHHHHHHHHhCCCcccc
Confidence 6999999999999998 6889999999765 78888899999999865444
No 19
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.56 E-value=0.0022 Score=48.79 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=40.6
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcch
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFD 48 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~ 48 (90)
||+|||++++++++++ +.++.-++||..+ |..-...-||..+||..
T Consensus 126 ~SGIAT~T~~~v~~~~-~~~~~i~dTRKT~-PGlR~lekyAV~~GGg~ 171 (300)
T 3l0g_A 126 ASGIASITRQFVDEVS-GTKVKIRSTRKTT-PGLRMLDKYSVCIGGGE 171 (300)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEeecCccC-hhhhHHHHHHHHhcCCc
Confidence 6999999999999998 7899999999766 78888888999999854
No 20
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.02 E-value=0.0043 Score=46.54 Aligned_cols=47 Identities=21% Similarity=0.186 Sum_probs=38.1
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchhhh
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDGTS 51 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~gtS 51 (90)
||+|||++++++++++ + +.-++||..+ |......-||..+||....+
T Consensus 113 ~SGIAT~t~~~v~~~~-~--~~i~~TRKt~-Pglr~~~kyAv~~GGg~nHR 159 (285)
T 1o4u_A 113 MFSVATTTRRFAEKLK-H--AKIAATRKIL-PGLGVLQKIAVVHGGGDPHR 159 (285)
T ss_dssp HHHHHHHHHHHHHTCS-S--SEEECCSCCC-TTTHHHHHHHHHHHTCC---
T ss_pred HHHHHHHHHHHHHHhC-C--CEEeecCCCC-hhhHHHHHHHHHhCCCCCcc
Confidence 6999999999999998 5 6777999765 68888889999999877554
No 21
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=95.92 E-value=0.0077 Score=45.02 Aligned_cols=47 Identities=17% Similarity=0.009 Sum_probs=41.4
Q ss_pred ChhHHHHHHHHHHHhCCCCceeEecCCCCCChhhHHHHHHHHhcCcchh
Q psy13791 1 MLLMATNAARYRLAAGRNVSLLEFGLRRAQGPDGGLSASKYAYAGGFDG 49 (90)
Q Consensus 1 ~s~iAtka~ri~~aA~~~~~v~~fG~RR~~~~~~~~~~~raa~igG~~g 49 (90)
||+|||++++++++++ +.++.-+++|..+ |......-++..+||...
T Consensus 113 ~SGIAT~t~~~v~~~~-g~~~~i~~tRKt~-Pglr~l~k~Av~~GG~~n 159 (284)
T 1qpo_A 113 LSGIATATAAWVDAVR-GTKAKIRDTRKTL-PGLRALQKYAVRTGGGVN 159 (284)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHHhc-CCCcEEEEecccC-CCchHHHhhhhhhcCccc
Confidence 6899999999999998 7899999999766 688888899999998654
No 22
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=29.11 E-value=4 Score=28.14 Aligned_cols=20 Identities=15% Similarity=-0.072 Sum_probs=15.1
Q ss_pred HhcCCCCccchhhHHHHhhC
Q psy13791 57 KMYNIPVRGTHAHAYITSFN 76 (90)
Q Consensus 57 ~~~gl~~~GTmaH~~iq~~~ 76 (90)
+..++...-|||||+=-.|+
T Consensus 135 ~d~~~~~a~~~AHElGHnlG 154 (217)
T 3b8z_A 135 EDDGLHAAFTVAHEIGHLLG 154 (217)
T ss_dssp ECCSSSHHHHHHHHHHHHTT
T ss_pred ccCCcchhhhhHhhhhhhcC
Confidence 33566667899999987776
No 23
>2glo_A Brinker CG9653-PA; protein-DNA complex, helix-turn-helix motif, transcription/DNA complex; NMR {Drosophila melanogaster}
Probab=24.07 E-value=71 Score=17.05 Aligned_cols=49 Identities=22% Similarity=0.288 Sum_probs=27.4
Q ss_pred cCCCCCChhhHHHHHHHHhcCcchh-hhhHHHHHhcCCCCccchhhHHHHhhC
Q psy13791 25 GLRRAQGPDGGLSASKYAYAGGFDG-TSNVLAGKMYNIPVRGTHAHAYITSFN 76 (90)
Q Consensus 25 G~RR~~~~~~~~~~~raa~igG~~g-tSnv~~a~~~gl~~~GTmaH~~iq~~~ 76 (90)
|.|+.++++.=..+ ...+.+|..- .|-...|+.|||. .. .-+.|+..|.
T Consensus 1 g~r~~ys~efK~~~-~~~~~~g~s~~~~~~~vA~~~gIs-~~-tl~~W~~~~~ 50 (59)
T 2glo_A 1 GSRRIFTPHFKLQV-LESYRNDNDCKGNQRATARKYNIH-RR-QIQKWLQCES 50 (59)
T ss_dssp CCCCCCCHHHHHHH-HHHHHHCTTTTTCHHHHHHHTTSC-HH-HHHHHHTTHH
T ss_pred CCCCcCCHHHHHHH-HHHHHcCCCcchHHHHHHHHHCcC-HH-HHHHHHHHHH
Confidence 55666775444444 4444444320 1266889999994 33 4556766554
No 24
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=20.19 E-value=1.9e+02 Score=20.61 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=20.7
Q ss_pred HHHHHHhCCCCceeEecCCCCC--ChhhH-HHHHHHHh
Q psy13791 9 ARYRLAAGRNVSLLEFGLRRAQ--GPDGG-LSASKYAY 43 (90)
Q Consensus 9 ~ri~~aA~~~~~v~~fG~RR~~--~~~~~-~~~~raa~ 43 (90)
+..++. + +.+|+.||.||-. +++.. .....+-+
T Consensus 103 ~laR~H-N-nANVL~lG~~rvi~~g~ela~~~Iv~~fL 138 (216)
T 2ppw_A 103 YLYSQI-N-GGNALSIPYAKGFGWGAELTLKLMFERLF 138 (216)
T ss_dssp HHHHHH-T-CCSEEEEESSTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHh-c-CceEEEeCCceecccCHHHHHHHHHHHHH
Confidence 333444 4 7899999998766 55555 34444433
No 25
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=20.18 E-value=24 Score=23.87 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=23.5
Q ss_pred HhcCcchhhhhHHHHHh---cCCCCccchhhHHHHhh
Q psy13791 42 AYAGGFDGTSNVLAGKM---YNIPVRGTHAHAYITSF 75 (90)
Q Consensus 42 a~igG~~gtSnv~~a~~---~gl~~~GTmaH~~iq~~ 75 (90)
..|||-.|.|.-...+- +.+-++ |+||+++-..
T Consensus 100 FvIGG~~Gl~~~v~~rA~~~lSlS~m-T~pHql~Rli 135 (155)
T 1ns5_A 100 LLIGGPEGLSPACKAAAEQSWSLSAL-TLPHPLVRVL 135 (155)
T ss_dssp EEECBTTBCCHHHHHHCSEEECCCSS-CCCHHHHHHH
T ss_pred EEEECCCCCCHHHHHhhCceEEccCC-CCcHHHHHHH
Confidence 46999999998766654 334333 8999997543
Done!