Query psy138
Match_columns 321
No_of_seqs 243 out of 2880
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 20:47:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-53 5.9E-58 366.8 30.8 305 2-318 60-385 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 2E-52 7E-57 360.1 32.1 304 2-317 27-351 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 8.8E-52 3E-56 336.4 33.0 266 29-308 3-284 (285)
4 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-50 3.7E-55 339.6 30.4 289 28-318 21-321 (351)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-48 4.5E-53 325.1 30.8 266 26-306 20-330 (337)
6 4g8k_A 2-5A-dependent ribonucl 100.0 1.9E-48 6.5E-53 324.1 30.7 238 62-317 22-308 (337)
7 3d9h_A CDNA FLJ77766, highly s 100.0 4.7E-49 1.6E-53 319.6 25.2 264 25-306 9-283 (285)
8 2fo1_E LIN-12 protein; beta-ba 100.0 4.2E-48 1.4E-52 325.7 19.3 263 26-303 89-372 (373)
9 1wdy_A 2-5A-dependent ribonucl 100.0 1.2E-46 4.2E-51 306.0 27.3 242 63-317 3-260 (285)
10 3d9h_A CDNA FLJ77766, highly s 100.0 9.3E-47 3.2E-51 306.1 26.2 241 62-317 12-262 (285)
11 1oy3_D Transcription factor in 100.0 1.9E-47 6.5E-52 310.4 21.9 250 58-319 2-267 (282)
12 2xai_A ASB-9, ankyrin repeat a 100.0 2.9E-46 1E-50 299.6 25.2 237 31-319 3-247 (261)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 1.6E-46 5.5E-51 299.8 23.1 232 58-302 3-248 (253)
14 3ljn_A Hypothetical protein; a 100.0 4E-47 1.4E-51 319.4 16.7 261 27-304 16-316 (364)
15 2xai_A ASB-9, ankyrin repeat a 100.0 3.6E-46 1.2E-50 299.1 20.7 219 27-297 32-258 (261)
16 3aji_A 26S proteasome non-ATPa 100.0 2.7E-45 9.2E-50 289.0 24.7 226 31-303 6-231 (231)
17 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-44 9.7E-49 300.7 31.9 259 28-302 55-334 (351)
18 2fo1_E LIN-12 protein; beta-ba 100.0 9.7E-47 3.3E-51 317.4 14.6 242 60-317 89-353 (373)
19 1k1a_A B-cell lymphoma 3-encod 100.0 2.6E-45 8.9E-50 291.0 21.6 229 59-301 3-240 (241)
20 3ljn_A Hypothetical protein; a 100.0 1.2E-45 4.3E-50 310.3 19.3 245 58-316 13-295 (364)
21 3b7b_A Euchromatic histone-lys 100.0 4.4E-44 1.5E-48 283.2 25.9 226 58-297 4-230 (237)
22 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-44 8.2E-49 287.2 23.0 225 28-265 7-245 (253)
23 3aji_A 26S proteasome non-ATPa 100.0 5.1E-44 1.8E-48 281.7 23.6 196 26-269 35-230 (231)
24 3b7b_A Euchromatic histone-lys 100.0 2.3E-43 7.9E-48 279.0 25.5 213 92-317 4-217 (237)
25 4b93_B Ankyrin repeat domain-c 100.0 4.1E-45 1.4E-49 293.1 15.1 227 65-304 11-246 (269)
26 1k1a_A B-cell lymphoma 3-encod 100.0 5.2E-43 1.8E-47 277.7 25.9 214 92-318 2-224 (241)
27 3eu9_A Huntingtin-interacting 100.0 1.6E-42 5.4E-47 274.8 26.1 232 28-306 6-239 (240)
28 2dzn_A Probable 26S proteasome 100.0 5.8E-43 2E-47 275.1 23.2 209 65-285 2-216 (228)
29 1s70_B 130 kDa myosin-binding 100.0 1.6E-43 5.6E-48 289.6 19.0 254 22-299 31-286 (299)
30 1s70_B 130 kDa myosin-binding 100.0 1.2E-42 4.1E-47 284.5 23.2 260 37-318 4-273 (299)
31 3kea_A K1L; tropism, ANK repea 100.0 6.5E-44 2.2E-48 289.3 15.5 246 39-310 7-254 (285)
32 1oy3_D Transcription factor in 100.0 3.1E-43 1.1E-47 285.6 19.6 249 27-289 5-270 (282)
33 3eu9_A Huntingtin-interacting 100.0 7.8E-42 2.7E-46 270.8 26.1 197 28-271 39-237 (240)
34 2f8y_A Notch homolog 1, transl 100.0 2E-42 6.7E-47 271.2 21.8 216 76-304 2-218 (223)
35 4b93_B Ankyrin repeat domain-c 100.0 8.2E-43 2.8E-47 279.7 17.9 211 94-317 6-225 (269)
36 2dzn_A Probable 26S proteasome 100.0 5.8E-42 2E-46 269.4 22.0 219 31-264 2-226 (228)
37 1ikn_D Protein (I-kappa-B-alph 100.0 3.3E-42 1.1E-46 272.2 12.9 218 60-317 3-226 (236)
38 2f8y_A Notch homolog 1, transl 100.0 1.2E-40 4.2E-45 261.0 21.3 216 42-271 2-218 (223)
39 1sw6_A Regulatory protein SWI6 100.0 1.7E-42 5.8E-47 286.3 8.3 253 41-318 29-324 (327)
40 2rfa_A Transient receptor pote 100.0 9.3E-40 3.2E-44 257.5 22.0 210 65-307 3-227 (232)
41 3kea_A K1L; tropism, ANK repea 100.0 2.7E-40 9.2E-45 268.0 18.4 215 76-309 11-227 (285)
42 3hra_A Ankyrin repeat family p 100.0 2.6E-37 8.9E-42 238.1 24.1 193 63-300 3-201 (201)
43 2pnn_A Transient receptor pote 100.0 6.9E-39 2.4E-43 258.6 15.0 223 61-315 9-272 (273)
44 2rfa_A Transient receptor pote 100.0 1.1E-37 3.8E-42 245.6 21.2 200 30-237 2-224 (232)
45 2etb_A Transient receptor pote 100.0 1.5E-38 5.2E-43 254.3 15.9 206 65-304 2-248 (256)
46 1sw6_A Regulatory protein SWI6 100.0 1.1E-39 3.8E-44 269.5 9.3 253 3-288 33-327 (327)
47 3hra_A Ankyrin repeat family p 100.0 1.6E-36 5.4E-41 233.7 23.9 190 29-264 3-199 (201)
48 1ikn_D Protein (I-kappa-B-alph 100.0 1.7E-38 5.7E-43 250.9 11.5 213 27-285 4-227 (236)
49 4gpm_A Engineered protein OR26 100.0 7.8E-37 2.7E-41 227.1 19.6 159 101-305 6-164 (169)
50 4gpm_A Engineered protein OR26 100.0 1.8E-35 6.1E-40 219.7 19.7 159 67-272 6-164 (169)
51 2pnn_A Transient receptor pote 100.0 1.3E-36 4.3E-41 245.4 14.4 215 27-244 9-268 (273)
52 2etb_A Transient receptor pote 100.0 3.1E-36 1.1E-40 240.9 14.2 202 31-236 2-247 (256)
53 3jxi_A Vanilloid receptor-rela 100.0 1.1E-35 3.7E-40 238.3 14.7 195 98-305 4-253 (260)
54 4hbd_A KN motif and ankyrin re 100.0 1E-34 3.4E-39 234.1 16.8 194 100-300 77-273 (276)
55 3jxi_A Vanilloid receptor-rela 100.0 3.4E-34 1.2E-38 229.5 15.1 208 31-271 5-252 (260)
56 3v30_A DNA-binding protein rfx 100.0 1.6E-33 5.4E-38 211.3 15.5 169 99-313 2-171 (172)
57 4hbd_A KN motif and ankyrin re 100.0 1.6E-33 5.4E-38 227.1 16.3 192 64-267 75-274 (276)
58 2rfm_A Putative ankyrin repeat 100.0 6.2E-33 2.1E-37 211.9 16.9 163 92-300 28-190 (192)
59 3v30_A DNA-binding protein rfx 100.0 8.5E-33 2.9E-37 207.4 16.5 170 65-280 2-171 (172)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.8E-32 6.1E-37 203.6 18.0 158 98-302 4-162 (162)
61 2rfm_A Putative ankyrin repeat 100.0 3.9E-32 1.3E-36 207.5 18.2 162 58-265 28-189 (192)
62 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.7E-32 2E-36 202.1 18.7 159 96-300 11-169 (169)
63 3v31_A Ankyrin repeat family A 100.0 3.2E-32 1.1E-36 203.2 16.9 161 98-304 2-162 (167)
64 3f6q_A Integrin-linked protein 100.0 1.8E-31 6.1E-36 201.4 19.9 168 29-209 3-170 (179)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.3E-31 7.8E-36 198.9 18.8 159 60-264 9-167 (169)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-31 4E-36 199.1 17.0 158 64-269 4-162 (162)
67 3f6q_A Integrin-linked protein 100.0 1.1E-31 3.8E-36 202.6 16.6 168 97-310 3-171 (179)
68 3v31_A Ankyrin repeat family A 100.0 3.6E-31 1.2E-35 197.5 18.9 155 64-264 2-156 (167)
69 2vge_A RELA-associated inhibit 100.0 1.1E-34 3.7E-39 227.1 -0.9 140 29-170 19-161 (229)
70 2vge_A RELA-associated inhibit 100.0 1E-34 3.6E-39 227.2 -1.0 201 47-263 1-208 (229)
71 2aja_A Ankyrin repeat family p 100.0 2.2E-35 7.6E-40 245.9 -5.6 255 33-318 67-357 (376)
72 3twr_A Tankyrase-2; ankyrin re 100.0 4.4E-31 1.5E-35 196.6 17.2 160 28-201 5-164 (165)
73 2aja_A Ankyrin repeat family p 100.0 2.7E-34 9.1E-39 239.4 -2.3 242 28-299 89-371 (376)
74 1awc_B Protein (GA binding pro 100.0 1.6E-30 5.4E-35 191.0 17.3 150 100-296 3-152 (153)
75 1awc_B Protein (GA binding pro 100.0 1.9E-30 6.6E-35 190.6 17.5 151 65-262 2-152 (153)
76 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.6E-33 5.5E-38 222.4 1.1 205 64-318 4-226 (239)
77 3twr_A Tankyrase-2; ankyrin re 100.0 7.6E-31 2.6E-35 195.3 15.0 157 62-264 5-161 (165)
78 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.2E-30 1.1E-34 190.1 17.6 153 99-299 2-155 (156)
79 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.1E-30 3.1E-34 187.7 17.4 154 31-199 2-155 (156)
80 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.3E-31 1.1E-35 209.2 9.0 166 97-309 3-171 (239)
81 1bi7_B P16INK4A, MTS1, multipl 100.0 2.2E-29 7.4E-34 185.5 11.6 145 159-317 6-151 (156)
82 1d9s_A Cyclin-dependent kinase 100.0 9.9E-29 3.4E-33 177.6 13.9 134 155-302 2-136 (136)
83 3t8k_A Uncharacterized protein 100.0 4.1E-29 1.4E-33 188.6 7.9 167 99-306 6-183 (186)
84 3t8k_A Uncharacterized protein 100.0 4.5E-28 1.5E-32 182.9 12.3 159 65-232 6-176 (186)
85 1bi7_B P16INK4A, MTS1, multipl 100.0 6.3E-28 2.2E-32 177.6 12.7 141 130-284 10-151 (156)
86 1d9s_A Cyclin-dependent kinase 100.0 3.2E-27 1.1E-31 169.7 15.3 132 124-269 4-136 (136)
87 2jab_A H10-2-G3; HER2, darpin, 100.0 3.6E-27 1.2E-31 169.4 15.4 128 26-155 9-136 (136)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.5E-27 2.2E-31 165.9 15.5 126 30-157 1-126 (126)
89 3c5r_A BARD-1, BRCA1-associate 99.9 6.7E-27 2.3E-31 168.3 13.4 117 200-318 1-117 (137)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2E-26 7E-31 163.3 15.5 126 164-302 1-126 (126)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 3.1E-26 1.1E-30 164.5 13.8 126 162-300 11-136 (136)
92 3aaa_C Myotrophin, protein V-1 99.9 5E-26 1.7E-30 160.5 11.9 111 207-318 4-114 (123)
93 3c5r_A BARD-1, BRCA1-associate 99.9 3.6E-26 1.2E-30 164.5 8.4 134 155-302 1-134 (137)
94 3deo_A Signal recognition part 99.9 4.6E-25 1.6E-29 166.7 13.2 140 28-199 41-181 (183)
95 3deo_A Signal recognition part 99.9 4.8E-25 1.6E-29 166.6 12.2 140 62-232 41-181 (183)
96 3aaa_C Myotrophin, protein V-1 99.9 5.1E-25 1.8E-29 155.3 11.4 116 29-146 5-120 (123)
97 3ui2_A Signal recognition part 99.9 6E-25 2.1E-29 173.7 12.1 140 64-234 44-184 (244)
98 3ehr_A Osteoclast-stimulating 99.9 4.9E-25 1.7E-29 172.0 9.6 135 28-164 70-205 (222)
99 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-24 8.3E-29 175.0 13.8 139 29-175 149-296 (301)
100 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.5E-24 1.2E-28 143.0 12.2 93 209-302 1-93 (93)
101 3ui2_A Signal recognition part 99.9 2.6E-24 8.9E-29 170.0 13.5 142 29-202 43-185 (244)
102 3ehr_A Osteoclast-stimulating 99.9 4.1E-25 1.4E-29 172.4 8.4 137 162-311 70-207 (222)
103 1dcq_A PYK2-associated protein 99.9 1.5E-23 5E-28 168.5 16.9 130 133-302 131-263 (278)
104 2b0o_E UPLC1; arfgap, structur 99.9 3.1E-24 1.1E-28 174.3 12.4 134 165-317 151-293 (301)
105 2l6b_A NR1C; ankyrin, consensu 99.9 1.5E-24 5.1E-29 151.0 7.8 109 205-314 4-112 (115)
106 3jue_A Arfgap with coiled-coil 99.9 2.8E-23 9.4E-28 172.4 13.1 144 164-319 198-346 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.9 8.9E-23 3E-27 177.6 14.5 132 166-310 133-273 (497)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.5E-22 5.3E-27 135.0 12.2 91 65-156 2-92 (93)
109 1dcq_A PYK2-associated protein 99.9 2.2E-22 7.6E-27 161.6 15.4 128 30-158 129-264 (278)
110 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-22 6.6E-27 175.5 15.9 129 31-161 132-269 (497)
111 3jue_A Arfgap with coiled-coil 99.9 1.8E-22 6.1E-27 167.6 14.0 143 29-173 197-345 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.9 2.3E-22 7.8E-27 139.9 7.0 107 61-168 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 5.9E-20 2E-24 126.3 10.0 92 204-296 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 2.6E-19 8.8E-24 123.1 10.3 91 60-151 19-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 55.9 8.5 0.00029 31.4 3.3 258 28-294 34-313 (351)
116 3mkq_B Coatomer subunit alpha; 52.0 64 0.0022 23.2 7.6 113 29-154 6-140 (177)
117 3zrh_A Ubiquitin thioesterase 50.1 46 0.0016 27.6 6.4 51 36-86 27-90 (454)
118 4g26_A Pentatricopeptide repea 47.1 28 0.00096 30.0 5.3 40 189-230 159-198 (501)
119 1gp8_A Protein (scaffolding pr 44.8 19 0.00065 18.2 2.2 16 35-50 17-32 (40)
120 4g26_A Pentatricopeptide repea 36.4 44 0.0015 28.7 4.8 118 33-159 31-174 (501)
121 3zrh_A Ubiquitin thioesterase 27.9 2.1E+02 0.0073 23.8 7.0 19 73-91 30-48 (454)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-53 Score=366.78 Aligned_cols=305 Identities=27% Similarity=0.357 Sum_probs=230.0
Q ss_pred cceehhhccCCCcccccCcccccccccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHH
Q psy138 2 VDVISIFLSKPNLVWENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCA 81 (321)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 81 (321)
++++++|++.+... + ..+.+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++
T Consensus 60 ~~~v~~Ll~~g~~~--------~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v 129 (437)
T 1n11_A 60 TEVAKYLLQNKAKV--------N-AKAKDDQTPLHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETV 129 (437)
T ss_dssp HHHHHHHHHHTCCS--------S-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHhCCCCC--------C-CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHH
Confidence 35667777653221 1 1234477778888887877777777777654 566666777777777777777777
Q ss_pred HHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC
Q psy138 82 ETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP 161 (321)
Q Consensus 82 ~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~ 161 (321)
++|++++.. ....+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++|+++|.+++..
T Consensus 130 ~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 208 (437)
T 1n11_A 130 LALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP 208 (437)
T ss_dssp HHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCC
T ss_pred HHHHhCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence 777776655 3455566667777777777777777777766666666666666666666666666666666666666666
Q ss_pred CCCCCchhhhHhhhccccc---------------cc------ccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhc
Q psy138 162 DIHGGYPIHYASQMCGHAS---------------EM------GNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220 (321)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~---------------~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 220 (321)
+..|.||++.|+....... .. -.....+.+++++|++++.+++..+..|.||||.|+..
T Consensus 209 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~ 288 (437)
T 1n11_A 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE 288 (437)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence 6666666666554321000 00 00114457889999999999998889999999999999
Q ss_pred CCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 221 GSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 221 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 289 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 289 GHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp TCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 99999999999999999999999999999999999999999999 69999999999999999999999999999999999
Q ss_pred CCCCccCCCCCccceeec
Q psy138 301 ATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 301 a~~~~~~~~g~t~l~~~~ 318 (321)
|+++.+|.+|+||++++.
T Consensus 368 a~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 368 ASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp CCSCCCCSSSCCHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHH
Confidence 999999999999999854
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-52 Score=360.12 Aligned_cols=304 Identities=26% Similarity=0.321 Sum_probs=255.1
Q ss_pred cceehhhccCCCcccccCcccccccccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHH
Q psy138 2 VDVISIFLSKPNLVWENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCA 81 (321)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 81 (321)
++++++|++++.. ++ ..+..|.||||.|+..|+.+++++|++.+.. ++.++..|.||||+|+..|+.+++
T Consensus 27 ~~~v~~Ll~~g~~--------~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v 96 (437)
T 1n11_A 27 LPIVKNLLQRGAS--------PN-VSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMV 96 (437)
T ss_dssp HHHHHHHHHTTCC--------SC-CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHcCCC--------CC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHH
Confidence 4567777776322 11 1234588899999999999999999888765 778888889999999999999999
Q ss_pred HHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC
Q psy138 82 ETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP 161 (321)
Q Consensus 82 ~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~ 161 (321)
++|++++.+ ++..+..|.||||+|+..|+.+++++|++++++.+..+..|.|||++|+..|+.+++++|+++|++++..
T Consensus 97 ~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 175 (437)
T 1n11_A 97 KLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA 175 (437)
T ss_dssp HHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 999998877 5777888899999999999999999999998888888888999999999999999999999999999999
Q ss_pred CCCCCchhhhHhhhccccc---------------------ccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhc
Q psy138 162 DIHGGYPIHYASQMCGHAS---------------------EMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220 (321)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 220 (321)
+..|.||++.|+....... ..........+++++|++.|.+++..+..|.||||.|+..
T Consensus 176 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 255 (437)
T 1n11_A 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 255 (437)
T ss_dssp CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHC
Confidence 9999999999877532100 0000124567888888888888888888888999999999
Q ss_pred CCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 221 GSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 221 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++|
T Consensus 256 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 334 (437)
T 1n11_A 256 GHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334 (437)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC
Confidence 99999999999999998888899999999999999999999998 69999999999999999999999999999999999
Q ss_pred CCCCccCCCCCccceee
Q psy138 301 ATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 301 a~~~~~~~~g~t~l~~~ 317 (321)
++++.+|..|.||||++
T Consensus 335 ad~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 335 ADVNAKTKLGYSPLHQA 351 (437)
T ss_dssp CCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCCCCCHHHHH
Confidence 99999999999999874
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.8e-52 Score=336.38 Aligned_cols=266 Identities=28% Similarity=0.351 Sum_probs=251.4
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCccccc-ccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRER-DRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
.+|.|+||.|++.|+.+++++|++.+.. ++.. +..|.||||+|+..|+.+++++|++++.. ++..+..|.||||+|+
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHH
Confidence 3589999999999999999999999876 5544 78899999999999999999999999988 6778899999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC----------CCCCCchhhhHhhhcc
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP----------DIHGGYPIHYASQMCG 177 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~----------~~~~~~~l~~~~~~~~ 177 (321)
..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++.. +..|.+|++.|+.
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~--- 157 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE--- 157 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH---
T ss_pred HcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH---
Confidence 999999999999999999999999999999999999999999999999999877 7789999999997
Q ss_pred cccccccchhhhHHHHHHHHHc-CCCCcccCCCCCchhHHHHhcCC----HHHHHHHHHcCCCcccccCCCCcHHHHHHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHH-NVDVNVVDKDGRQPILWAASAGS----SDAILALVKAGANVEAHDKDGLTALHCAAS 252 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 252 (321)
..+.+++++|++. |.+++..+..|.||||.|+..++ .+++++|+++|++++.++..|.||||+|+.
T Consensus 158 ---------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 158 ---------KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 228 (285)
T ss_dssp ---------HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH
T ss_pred ---------cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 4458999999997 99999999999999999999999 899999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Q psy138 253 RGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDR 308 (321)
Q Consensus 253 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 308 (321)
.|+.+++++|++..|++++.+|..|.||||+|++.++.+++++|+++||+++.+|.
T Consensus 229 ~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 229 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp TTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred cCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 99999999999967999999999999999999999999999999999999999874
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.1e-50 Score=339.63 Aligned_cols=289 Identities=27% Similarity=0.329 Sum_probs=257.9
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
+..|.++||.|++.|+.+.+++++...+.+++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHH
Confidence 345899999999999999999999988888999999999999999999999999999999988 6888999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhccccc-------
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHAS------- 180 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------- 180 (321)
..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.+|++.+........
T Consensus 100 ~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~ 179 (351)
T 3utm_A 100 SYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999988754311100
Q ss_pred --ccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhc---CCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCC
Q psy138 181 --EMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA---GSSDAILALVKAGANVEAHDKDGLTALHCAASRGH 255 (321)
Q Consensus 181 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 255 (321)
..........+.++.++..+......+..+.||||.|+.. +..+++++|+++|++++.++..|.||||+|+..|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 259 (351)
T 3utm_A 180 HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH 259 (351)
T ss_dssp HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC
Confidence 0001112334556666665555555678899999999999 55899999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceeec
Q psy138 256 RECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 256 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~ 318 (321)
.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++..
T Consensus 260 ~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 260 NDVMEVLHK-HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 999999999 79999999999999999999999999999999999999999999999999853
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-48 Score=325.08 Aligned_cols=266 Identities=25% Similarity=0.272 Sum_probs=230.9
Q ss_pred cccccChhHHHHHHHcCCHHHHHHHHHcCCCccccccc-CCccHHHHHHHcCcHHHHHHHHHhCCcc-------------
Q psy138 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDR-TRKTVLHYCAENTILSCAETILEVAPDL------------- 91 (321)
Q Consensus 26 ~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------------- 91 (321)
..+.+|.|+||.|++.|+.++|++||+.|.+ ++.++. .|.||||+|+..|+.+++++|+++++.+
T Consensus 20 ~~~~~~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 98 (337)
T 4g8k_A 20 RAAVEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFIL 98 (337)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHH
Confidence 3455699999999999999999999999866 776654 5899999999999999999999987653
Q ss_pred -------------------ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccC----------CCCCCcHHHHHHhc
Q psy138 92 -------------------IEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQ----------DNEGHSVVHWATVC 142 (321)
Q Consensus 92 -------------------~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~----------~~~~~t~l~~a~~~ 142 (321)
++..+..|.||+|+|+..|+.+++++|+++|++++.. +..|.||||+|+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred HHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 3445678899999999999999999999999887653 34688999999999
Q ss_pred CCHHHHHHHHH-cCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcC
Q psy138 143 GEVEALETVLS-AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG 221 (321)
Q Consensus 143 ~~~~i~~~L~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 221 (321)
|+.+++++|++ .|++++..+..|.++++.++..... .....++++|+++|++++.++..|.||||.|+..|
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~--------~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~ 250 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD--------SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 250 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT--------TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc--------ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhh
Confidence 99999999995 5899999999999999887654332 23356889999999999999999999999999999
Q ss_pred CHHHHHHHHHc-CCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 222 SSDAILALVKA-GANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 222 ~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
+.++++.|++. |++++.+|.+|.||||+|+..|+.+++++|++ +|++++.+ +||++|++.|+.+++++|+++|
T Consensus 251 ~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 251 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCG-----DLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp CHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTT
T ss_pred hhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCc
Confidence 99999999975 89999999999999999999999999999999 69988754 5999999999999999999999
Q ss_pred CCCCcc
Q psy138 301 ATPNRQ 306 (321)
Q Consensus 301 a~~~~~ 306 (321)
|++|..
T Consensus 325 A~~d~~ 330 (337)
T 4g8k_A 325 AKEDFH 330 (337)
T ss_dssp CCC---
T ss_pred CCCCCC
Confidence 999875
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.9e-48 Score=324.10 Aligned_cols=238 Identities=25% Similarity=0.330 Sum_probs=210.4
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHHhCCccccccC-CCCCcHHHHHHHhCCHHHHHHHHHcCCCCc--------------
Q psy138 62 DRTRKTVLHYCAENTILSCAETILEVAPDLIEAAD-EDGYTPLHLAAIAGNVPLIHTLLAHRANVN-------------- 126 (321)
Q Consensus 62 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~-------------- 126 (321)
+..|.|+||.|++.|+.++|++|+++|++ ++..+ ..|.||||+|+..|+.++|++|+++|++++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 34578999999999999999999999988 45544 569999999999999999999999988654
Q ss_pred -------------------cCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC----------CCCCCchhhhHhhhcc
Q psy138 127 -------------------SQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP----------DIHGGYPIHYASQMCG 177 (321)
Q Consensus 127 -------------------~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~----------~~~~~~~l~~~~~~~~ 177 (321)
..+..|.||+++|+..|+.+++++|+++|++++.. +..|.||||+|+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~--- 177 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE--- 177 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH---
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH---
Confidence 45667889999999999999999999999887643 4468899999987
Q ss_pred cccccccchhhhHHHHHHHHH-cCCCCcccCCCCCchhHHHHhcCC----HHHHHHHHHcCCCcccccCCCCcHHHHHHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLH-HNVDVNVVDKDGRQPILWAASAGS----SDAILALVKAGANVEAHDKDGLTALHCAAS 252 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 252 (321)
..+.+++++|++ .|++++..+..|.|+++.++..+. ..++++|+++|++++.++..|.||||+|+.
T Consensus 178 ---------~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 178 ---------KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 248 (337)
T ss_dssp ---------HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred ---------CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 445899999996 699999999999999998876544 357899999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 253 RGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 253 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
.|+.+++++|++..|++++.+|..|.||||+|++.|+.+++++|+++||+++.+ +|||++
T Consensus 249 ~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A 308 (337)
T 4g8k_A 249 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTA 308 (337)
T ss_dssp TTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHH
T ss_pred hhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHH
Confidence 999999999999679999999999999999999999999999999999999865 588763
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-49 Score=319.57 Aligned_cols=264 Identities=20% Similarity=0.254 Sum_probs=210.5
Q ss_pred ccccccChhHHHHHHHcCCHHHHHHHHHcCC----------CcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccc
Q psy138 25 VHNTMEGATSLMYAAQQGKDAEVKAILASRP----------NAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEA 94 (321)
Q Consensus 25 ~~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~----------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 94 (321)
.+.+..|.|+||+|+..|+.+.+..++..++ ..++.++..|.||||+|+..|+.+++++|++.+.+ ++.
T Consensus 9 ~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~ 87 (285)
T 3d9h_A 9 HHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNI 87 (285)
T ss_dssp ---------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCE
T ss_pred cccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCC
Confidence 3446679999999999999888888766542 23566789999999999999999999999999887 688
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhh
Q psy138 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQ 174 (321)
Q Consensus 95 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~ 174 (321)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.|++++..+ .|.||+++|+.
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~ 166 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAAR 166 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999987644 59999999987
Q ss_pred hcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcC
Q psy138 175 MCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRG 254 (321)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 254 (321)
....+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..+
T Consensus 167 ------------~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 167 ------------RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp ------------HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred ------------cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 4457999999999999999999999999999999999999999999999985 889999999999999
Q ss_pred CHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcc
Q psy138 255 HRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQY-GATPNRQ 306 (321)
Q Consensus 255 ~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-ga~~~~~ 306 (321)
+.+++++|++ .|++++.+|..|.|||++|+ ++.+++++|+++ |+++..+
T Consensus 234 ~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~~ 283 (285)
T 3d9h_A 234 SEELACLLMD-FGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPKP 283 (285)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-------
T ss_pred CHHHHHHHHH-CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCCC
Confidence 9999999999 69999999999999999998 567899999998 8876653
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.2e-48 Score=325.74 Aligned_cols=263 Identities=24% Similarity=0.294 Sum_probs=233.8
Q ss_pred cccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccc-cCCccHHHHHHHcCcHHHHHHHH--------HhCCccccccC
Q psy138 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERD-RTRKTVLHYCAENTILSCAETIL--------EVAPDLIEAAD 96 (321)
Q Consensus 26 ~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~~~~~~~~~~ 96 (321)
..+..|.|+||.|+..|. ++++.|+. ..++.+| ..|.||||+|+..|+.+++++|+ +.+.+ ++..+
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d 163 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMD 163 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCC
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCC
Confidence 446779999999999665 77777754 2466677 78999999999999999888887 66766 68889
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcC---CCCCCCCCCCCchhhhHh
Q psy138 97 EDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG---AEPSTPDIHGGYPIHYAS 173 (321)
Q Consensus 97 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~---~~~~~~~~~~~~~l~~~~ 173 (321)
..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++ .+++..+..|.||+++|+
T Consensus 164 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 164 CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 799999999999999998
Q ss_pred hhcccccccccchhhhHHHHHHHHHcCCCCcc--------cCCCCCchhHHHHhcCCHHHHHHHHHcC-CCcccccCCCC
Q psy138 174 QMCGHASEMGNDVRVGLAVLKVLLHHNVDVNV--------VDKDGRQPILWAASAGSSDAILALVKAG-ANVEAHDKDGL 244 (321)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~ 244 (321)
...+ ....+++++|++.|.+++. .+..|.||||+|+..|+.+++++|++++ ++++..|..|.
T Consensus 244 ~~~~---------~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~ 314 (373)
T 2fo1_E 244 HNEG---------RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 314 (373)
T ss_dssp HSCS---------TTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCC
T ss_pred HhCC---------cchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCC
Confidence 7532 1258999999999999886 5668999999999999999999999876 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy138 245 TALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATP 303 (321)
Q Consensus 245 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~ 303 (321)
||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++|++.
T Consensus 315 TpL~~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 315 TPIMLAAQEGRIEVVMYLIQ-QGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHH-TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CHHHHHHHcCCHHHHHHHHH-cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999999999999999 79999999999999999999999999999999999863
No 9
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-46 Score=306.03 Aligned_cols=242 Identities=26% Similarity=0.312 Sum_probs=229.0
Q ss_pred cCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhc
Q psy138 63 RTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVC 142 (321)
Q Consensus 63 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 142 (321)
..|.||||.|++.|+.+++++|+++++.+....+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 35789999999999999999999999885444488899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCccc----------CCCCCc
Q psy138 143 GEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVV----------DKDGRQ 212 (321)
Q Consensus 143 ~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~t 212 (321)
|+.+++++|+++|++++..+..|.||++.|+.. .+.+++++|++.|.+++.. +..|.|
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~------------~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t 150 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY------------GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT------------TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh------------CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCc
Confidence 999999999999999999999999999999874 4579999999999999877 778999
Q ss_pred hhHHHHhcCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHcCC----HHHHHHHHhhcCCCcccCCCCCCcHHHHHHHc
Q psy138 213 PILWAASAGSSDAILALVKA-GANVEAHDKDGLTALHCAASRGH----RECLETLITLCGADVDVIDTNGCSALFYAVTL 287 (321)
Q Consensus 213 ~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~ 287 (321)
|||.|+..|+.+++++|++. |++++..+..|.||||+|+..++ .+++++|++ .|++++.++..|.||||+|+..
T Consensus 151 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 151 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEK 229 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHc
Confidence 99999999999999999987 99999999999999999999999 999999999 7999999999999999999999
Q ss_pred CCHHHHHHHHH-cCCCCCccCCCCCccceee
Q psy138 288 GHADATTLLLQ-YGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 288 ~~~~~~~~Ll~-~ga~~~~~~~~g~t~l~~~ 317 (321)
|+.+++++|++ .|++++.+|..|+||||++
T Consensus 230 ~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A 260 (285)
T 1wdy_A 230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLA 260 (285)
T ss_dssp TCHHHHHHHHHSSSCCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHHhccCCCccccCCCCCcHHHHH
Confidence 99999999999 8999999999999999985
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.3e-47 Score=306.10 Aligned_cols=241 Identities=21% Similarity=0.271 Sum_probs=201.2
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHHhCC----------ccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCC
Q psy138 62 DRTRKTVLHYCAENTILSCAETILEVAP----------DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNE 131 (321)
Q Consensus 62 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----------~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 131 (321)
...|.|++|+|+..|+.+.+..++...+ ...+..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD 91 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 4578999999999999877777655432 224567889999999999999999999999999999999999
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCC
Q psy138 132 GHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGR 211 (321)
Q Consensus 132 ~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (321)
|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+. ..+.+++++|++.|.+++..+ .|.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~------------~~~~~~v~~Ll~~g~~~~~~~-~g~ 158 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV------------SGSWDCVNLLLQHGASVQPES-DLA 158 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH------------HTCHHHHHHHHHTTCCSSCSC-TTS
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------------cCHHHHHHHHHHCCCCCCCCC-CCC
Confidence 9999999999999999999999999999999999999999997 445899999999999988644 599
Q ss_pred chhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHH
Q psy138 212 QPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHAD 291 (321)
Q Consensus 212 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~ 291 (321)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++. +..|.||||+|+..++.+
T Consensus 159 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~-~~~g~t~L~~A~~~~~~~ 236 (285)
T 3d9h_A 159 SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE-SGADVNQ-GKGQDSPLHAVVRTASEE 236 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTC-CBTTBCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-CCCCCCC-CCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999 6999995 889999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCccceee
Q psy138 292 ATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 292 ~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
++++|+++|++++.+|..|+||+|++
T Consensus 237 ~v~~Ll~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 237 LACLLMDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHh
Confidence 99999999999999999999999986
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.9e-47 Score=310.41 Aligned_cols=250 Identities=21% Similarity=0.179 Sum_probs=185.8
Q ss_pred ccccccCCccHHHHHHHcCcHHHHHHHHHhCCc--cccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcH
Q psy138 58 VRERDRTRKTVLHYCAENTILSCAETILEVAPD--LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSV 135 (321)
Q Consensus 58 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~ 135 (321)
++.+|..|.||||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 345677788888888888888888888877654 246667778888888888888888888888888888888888888
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCC-------------CCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCC
Q psy138 136 VHWATVCGEVEALETVLSAGAEPSTPD-------------IHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVD 202 (321)
Q Consensus 136 l~~a~~~~~~~i~~~L~~~~~~~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 202 (321)
||+|+..|+.+++++|++++.+..... ..+.++++.+... .........+...+.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 150 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP-----------NPENEEEPRDEDWRLQ 150 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------CCCGGGG
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccc-----------ccchhhhhhhhhhhhc
Confidence 888888888888888888776543221 1223333333221 1112344455556677
Q ss_pred CcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHH
Q psy138 203 VNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDK-DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSAL 281 (321)
Q Consensus 203 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l 281 (321)
++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPL 229 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHH
Confidence 888899999999999999999999999999999999885 59999999999999999999999 6999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceeecc
Q psy138 282 FYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQWRS 319 (321)
Q Consensus 282 ~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~~ 319 (321)
|+|+..++.+++++|+++||+++.+|..|.||+++..|
T Consensus 230 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 230 GSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred HHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999999999999999999999999999999998654
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.9e-46 Score=299.61 Aligned_cols=237 Identities=20% Similarity=0.238 Sum_probs=162.8
Q ss_pred ChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhC
Q psy138 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAG 110 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~ 110 (321)
|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC
Confidence 45555555555555555555554433 444455555555555555555555555555444 3444455555555555555
Q ss_pred CHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhH
Q psy138 111 NVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGL 190 (321)
Q Consensus 111 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (321)
+.+++++|+++|++++.. ..|.||||+|+..|+.+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~-------------------------------------------- 115 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVE-------------------------------------------- 115 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHH--------------------------------------------
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHH--------------------------------------------
Confidence 555555555555554432 23445555555554444
Q ss_pred HHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCc
Q psy138 191 AVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADV 270 (321)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 270 (321)
++++|++.|.+++..+..|.||||.|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|++ .|+++
T Consensus 116 -~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~ 192 (261)
T 2xai_A 116 -CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMD-FGADT 192 (261)
T ss_dssp -HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCT
T ss_pred -HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHH-cCCCC
Confidence 55555555556666677788999999999999999999999999985 8899999999999999999999999 69999
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--------CCccCCCCCccceeecc
Q psy138 271 DVIDTNGCSALFYAVTLGHADATTLLLQYGAT--------PNRQDRKGRTYEYQWRS 319 (321)
Q Consensus 271 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~--------~~~~~~~g~t~l~~~~~ 319 (321)
+.+|..|.||+++|+..+ +++++|+++++. ++++|..|.||+|+...
T Consensus 193 ~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 193 QAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITK 247 (261)
T ss_dssp TCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGG
T ss_pred CCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcc
Confidence 999999999999998655 589999998874 45889999999998653
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.6e-46 Score=299.83 Aligned_cols=232 Identities=26% Similarity=0.276 Sum_probs=174.5
Q ss_pred ccccccCCccHHHHHHHcC-------------cHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy138 58 VRERDRTRKTVLHYCAENT-------------ILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRAN 124 (321)
Q Consensus 58 ~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~ 124 (321)
++.+|..|.||||+|+..| +.+++++|++.++.+....+..|.||||+|+..|+.+++++|+++|++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4445555666666666544 888888888888876666678888888888888888888888888888
Q ss_pred CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCC
Q psy138 125 VNSQDNEGHSVVHWATVCGEVEALETVLSAGA-EPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDV 203 (321)
Q Consensus 125 ~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (321)
++..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||+++|+.. ...+++++|++.|+++
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~------------~~~~~v~~Ll~~g~~~ 150 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL------------AVEGMLEDLINSHADV 150 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH------------TCSSHHHHHHHTTCCT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc------------ChHHHHHHHHHcCCCC
Confidence 88888888888888888888888888888876 7788888888888888864 3357888899999999
Q ss_pred cccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHH
Q psy138 204 NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFY 283 (321)
Q Consensus 204 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 283 (321)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~ 229 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDI 229 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCccccccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCC
Q psy138 284 AVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 284 A~~~~~~~~~~~Ll~~ga~ 302 (321)
|++.|+.+++++|.+....
T Consensus 230 A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 230 AQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp HHHTTCHHHHHHHHC----
T ss_pred HHHcCCHHHHHHHHHHhhh
Confidence 9999999999999976543
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4e-47 Score=319.43 Aligned_cols=261 Identities=19% Similarity=0.243 Sum_probs=237.3
Q ss_pred ccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHH
Q psy138 27 NTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLA 106 (321)
Q Consensus 27 ~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A 106 (321)
.+.+|.||||+|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++++.. ..+..|.||||+|
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~g~t~L~~A 91 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEV---HSLWHGQKPIHLA 91 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC---CCCBTTBCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---ccccCCCCHHHHH
Confidence 356699999999999999999999998765 888999999999999999999999999999985 2335799999999
Q ss_pred HHhCCHHHHHHHHHc----CCCCcc-----------------CCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCCCCCCC
Q psy138 107 AIAGNVPLIHTLLAH----RANVNS-----------------QDNEGHSVVHWATVCG--EVEALETVLSAGAEPSTPDI 163 (321)
Q Consensus 107 ~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~t~l~~a~~~~--~~~i~~~L~~~~~~~~~~~~ 163 (321)
+..|+.+++++|+++ |.+++. .+..|.||||+|+..| +.+++++|+++|++++..+.
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~ 171 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC
Confidence 999999999999998 888776 7888999999999999 99999999999999999999
Q ss_pred CCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCC-----CcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCccc
Q psy138 164 HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVD-----VNVVDKDGRQPILWAASAGSSDAILALVKAGANVEA 238 (321)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 238 (321)
.|.|||++|+. ..+.+++++|++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 172 ~g~t~L~~A~~------------~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 172 ADETPLMRAME------------FRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp TSCCHHHHHHH------------TTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred CCCCHHHHHHH------------cCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999997 3457999999999988 999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCccc------------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy138 239 HDKDGLTALHCAASRGHRECLETLITLCGADVDV------------IDTNGCSALFYAVTLGHADATTLLLQYGATPN 304 (321)
Q Consensus 239 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~ 304 (321)
.|..|.||||+|+..|+.+++++|++ .|++++. .+..++||++.|+..++.+.+..|++.+++..
T Consensus 240 ~d~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~ 316 (364)
T 3ljn_A 240 EDNEHTVPLYLSVRAAMVLLTKELLQ-KTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEV 316 (364)
T ss_dssp CCTTSCCHHHHHHHTCCHHHHHHHHH-HSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhChHHHHHHHHH-cCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 5766533 46688999999999998888888887775543
No 15
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.6e-46 Score=299.10 Aligned_cols=219 Identities=17% Similarity=0.208 Sum_probs=170.2
Q ss_pred ccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHH
Q psy138 27 NTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLA 106 (321)
Q Consensus 27 ~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A 106 (321)
.+.+|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++++.+. + .+..|.||||+|
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A 108 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEA 108 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHH
Confidence 345799999999999999999999998755 8889999999999999999999999999999874 3 345699999999
Q ss_pred HHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccch
Q psy138 107 AIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186 (321)
Q Consensus 107 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (321)
+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++. +..
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~---------------------- 165 (261)
T 2xai_A 109 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG---------------------- 165 (261)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBT----------------------
T ss_pred HHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCC----------------------
Confidence 999999999999999999999999999999999999999999999988877653 333
Q ss_pred hhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhc
Q psy138 187 RVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLC 266 (321)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 266 (321)
|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..+ +++++|++ .
T Consensus 166 -----------------------g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~-~ 219 (261)
T 2xai_A 166 -----------------------QDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLE-R 219 (261)
T ss_dssp -----------------------TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHH-C
T ss_pred -----------------------CCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHh-c
Confidence 455666666666666666666666666666666666666665333 35555555 2
Q ss_pred CC--------CcccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy138 267 GA--------DVDVIDTNGCSALFYAVTLGHADATTLLL 297 (321)
Q Consensus 267 ~~--------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 297 (321)
+. +++.++..|.||+|.|.+....+.++-++
T Consensus 220 ~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l 258 (261)
T 2xai_A 220 EGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFL 258 (261)
T ss_dssp -CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHH
Confidence 33 23455667777777776666555554443
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.7e-45 Score=289.03 Aligned_cols=226 Identities=23% Similarity=0.268 Sum_probs=167.5
Q ss_pred ChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhC
Q psy138 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAG 110 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~ 110 (321)
+.+|||.|++.|+.+.++++++.++..++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcC
Confidence 455666666666666666666655555555555666666666666666666666665554 4455555666666666666
Q ss_pred CHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhH
Q psy138 111 NVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGL 190 (321)
Q Consensus 111 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (321)
+.+++++|+++|++++..+..|.|||++|+..++.+++++|++
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------------------------------------- 127 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE------------------------------------- 127 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------------------------------------
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------------------------------------
Confidence 6666666666666665555556666666665555555555554
Q ss_pred HHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCc
Q psy138 191 AVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADV 270 (321)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 270 (321)
+|.+++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++ .|+++
T Consensus 128 --------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~ 198 (231)
T 3aji_A 128 --------GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVT-QGASI 198 (231)
T ss_dssp --------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCS
T ss_pred --------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCC
Confidence 455555666778899999999999999999999999999999999999999999999999999999 69999
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy138 271 DVIDTNGCSALFYAVTLGHADATTLLLQYGATP 303 (321)
Q Consensus 271 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~ 303 (321)
+.+|..|.||+++|+..++.+++++|+++|+++
T Consensus 199 ~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 199 YIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp CCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 999999999999999999999999999998864
No 17
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.8e-44 Score=300.70 Aligned_cols=259 Identities=25% Similarity=0.267 Sum_probs=233.6
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
+..|.||||+|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAA 132 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH
Confidence 45599999999999999999999998766 888999999999999999999999999999988 6788899999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHH---------------------HhcCCHHHHHHHHHcCCCCCCCCCCCC
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA---------------------TVCGEVEALETVLSAGAEPSTPDIHGG 166 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a---------------------~~~~~~~i~~~L~~~~~~~~~~~~~~~ 166 (321)
..|+.+++++|+++|++++..+..|.||++++ +..+..+.++.++..+......+..+.
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE 212 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCC
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCC
Confidence 99999999999999999999999999987765 455666777777777666666788899
Q ss_pred chhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcH
Q psy138 167 YPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTA 246 (321)
Q Consensus 167 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 246 (321)
||++.|+.... ....+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 213 t~L~~A~~~~~---------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~ 283 (351)
T 3utm_A 213 TALHCAVASLH---------PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTA 283 (351)
T ss_dssp CHHHHHHHCCS---------TTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CHHHHHHHHhC---------ccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 99999987422 245789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy138 247 LHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 247 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 302 (321)
||+|+..|+.+++++|++ .|++++.+|..|.||+++| ..+++++|.+.+..
T Consensus 284 L~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 284 LHRAALAGHLQTCRLLLS-YGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred HHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 999999999999999999 6999999999999999998 67899999988743
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9.7e-47 Score=317.42 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=218.1
Q ss_pred ccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccC-CCCCcHHHHHHHhCCHHHHHHHH--------HcCCCCccCCC
Q psy138 60 ERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAAD-EDGYTPLHLAAIAGNVPLIHTLL--------AHRANVNSQDN 130 (321)
Q Consensus 60 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~l~~A~~~~~~~~v~~Ll--------~~~~~~~~~~~ 130 (321)
..+..|.||||.|+..+. +++++|+.. . ++..+ ..|.||||+|+..|+.+++++|+ +.|++++..+.
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~~--~-~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~ 164 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITRE--S-VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 164 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCSTT--T-TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhccc--c-ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 456789999999999664 788887653 2 45556 78999999999999988877776 78999999999
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcC---CCCcccC
Q psy138 131 EGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHN---VDVNVVD 207 (321)
Q Consensus 131 ~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~ 207 (321)
.|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+. ....+++++|++.+ .+++..+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~------------~g~~~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAA------------NRDFGMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH------------TTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHH------------CCCHHHHHHHHhcCccccChhhcC
Confidence 99999999999999999999999999999999999999999997 34589999999988 7899999
Q ss_pred CCCCchhHHHHhcC---CHHHHHHHHHcCCCccc--------ccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCC
Q psy138 208 KDGRQPILWAASAG---SSDAILALVKAGANVEA--------HDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTN 276 (321)
Q Consensus 208 ~~~~t~l~~a~~~~---~~~~~~~Ll~~~~~~~~--------~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 276 (321)
..|.||||+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++..|++++.+|..
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~ 312 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 312 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC
Confidence 99999999999998 89999999999999886 56789999999999999999999999656999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 277 GCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 277 g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
|.||||+|+..|+.+++++|+++|++++.+|..|+||||++
T Consensus 313 g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999985
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.6e-45 Score=290.99 Aligned_cols=229 Identities=25% Similarity=0.329 Sum_probs=156.1
Q ss_pred cccccCCccHHHHHHHcCcHHHHHHHHH----hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCc
Q psy138 59 RERDRTRKTVLHYCAENTILSCAETILE----VAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHS 134 (321)
Q Consensus 59 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t 134 (321)
+.+|..|.||||+|+..|+.+++++|++ .+.. ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 3455566666666666666666666665 2333 4555666666666666666666666666666666666666666
Q ss_pred HHHHHHhcCCHHHHHHHHHcCC----CCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccC-CC
Q psy138 135 VVHWATVCGEVEALETVLSAGA----EPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVD-KD 209 (321)
Q Consensus 135 ~l~~a~~~~~~~i~~~L~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 209 (321)
||++|+..++.+++++|++.+. +++..+..|.+|++.|+. ..+.+++++|++.|.+++..+ ..
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~------------~~~~~~~~~Ll~~g~~~~~~~~~~ 149 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN------------TECQETVQLLLERGADIDAVDIKS 149 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH------------HTCHHHHHHHHHTTCCTTCCCTTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH------------cCCHHHHHHHHHcCCCcccccccC
Confidence 6666666666666666666655 445555555555555554 223455666666666666665 66
Q ss_pred CCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCC
Q psy138 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGH 289 (321)
Q Consensus 210 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 289 (321)
|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+..|+
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhcCc
Confidence 7888888888888888888888888888888888888888888888888888888 688888888888888888888888
Q ss_pred HHHHHHHHHcCC
Q psy138 290 ADATTLLLQYGA 301 (321)
Q Consensus 290 ~~~~~~Ll~~ga 301 (321)
.++++.|.+.++
T Consensus 229 ~~i~~~l~~~~a 240 (241)
T 1k1a_A 229 IDILRGKATRPA 240 (241)
T ss_dssp HHHHTC------
T ss_pred HHHHhhhccCCC
Confidence 888888887765
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-45 Score=310.34 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=221.5
Q ss_pred ccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHH
Q psy138 58 VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVH 137 (321)
Q Consensus 58 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~ 137 (321)
.+..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|++++. ..|.|||+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~ 89 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIH 89 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHH
Confidence 556778899999999999999999999999987 688899999999999999999999999999996654 57999999
Q ss_pred HHHhcCCHHHHHHHHHc----CCCCCC-----------------CCCCCCchhhhHhhhcccccccccchhhhHHHHHHH
Q psy138 138 WATVCGEVEALETVLSA----GAEPST-----------------PDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVL 196 (321)
Q Consensus 138 ~a~~~~~~~i~~~L~~~----~~~~~~-----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (321)
+|+..|+.+++++|++. +.+++. .+..|.||||+|+.... ...+++++|
T Consensus 90 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~----------~~~~~v~~L 159 (364)
T 3ljn_A 90 LAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGP----------EYLEMIKIL 159 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCG----------GGHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCC----------chHHHHHHH
Confidence 99999999999999998 777665 77889999999997421 158999999
Q ss_pred HHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCC-----cccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcc
Q psy138 197 LHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGAN-----VEAHDKDGLTALHCAASRGHRECLETLITLCGADVD 271 (321)
Q Consensus 197 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 271 (321)
++.|++++..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++ .|++++
T Consensus 160 l~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~ 238 (364)
T 3ljn_A 160 VQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVN 238 (364)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTT
T ss_pred HHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCC
Confidence 999999999999999999999999999999999999999 99999999999999999999999999999 799999
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------------cCCCCCcccee
Q psy138 272 VIDTNGCSALFYAVTLGHADATTLLLQYGATPNR------------QDRKGRTYEYQ 316 (321)
Q Consensus 272 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~------------~~~~g~t~l~~ 316 (321)
.+|..|.||||+|+..|+.+++++|+++|++++. .+..|+||++.
T Consensus 239 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (364)
T 3ljn_A 239 MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVP 295 (364)
T ss_dssp CCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSC
T ss_pred CCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchh
Confidence 9999999999999999999999999999987644 45566666654
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-44 Score=283.18 Aligned_cols=226 Identities=24% Similarity=0.367 Sum_probs=169.8
Q ss_pred ccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHH
Q psy138 58 VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVH 137 (321)
Q Consensus 58 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~ 137 (321)
++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 445566777777777777777777777777666 4566667777777777777777777777777777777777777777
Q ss_pred HHHhcCCHHHHHHHHHcC-CCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHH
Q psy138 138 WATVCGEVEALETVLSAG-AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216 (321)
Q Consensus 138 ~a~~~~~~~i~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 216 (321)
+|+..|+.+++++|++.+ .+++..+..|.||++.|+.. ...+++++|+++|.+++..+..|.||||.
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~------------~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 150 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEY------------KHVDLVKLLLSKGSDINIRDNEENICLHW 150 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHT------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc------------CCHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 777777777777777776 56666666666666666652 23566777777777777777778888888
Q ss_pred HHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy138 217 AASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLL 296 (321)
Q Consensus 217 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 296 (321)
|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||+++|+..++...+..|
T Consensus 151 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l 229 (237)
T 3b7b_A 151 AAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS-RDSDVTLKNKEGETPLQCASLNSQVWSALQM 229 (237)
T ss_dssp HHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHSCTTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH-cCCCCCccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 888888888888888888888888888888888888888888888888 6888888888888888888888877555444
Q ss_pred H
Q psy138 297 L 297 (321)
Q Consensus 297 l 297 (321)
+
T Consensus 230 ~ 230 (237)
T 3b7b_A 230 S 230 (237)
T ss_dssp H
T ss_pred H
Confidence 4
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-44 Score=287.25 Aligned_cols=225 Identities=24% Similarity=0.306 Sum_probs=184.9
Q ss_pred cccChhHHHHHHHcC-------------CHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccc
Q psy138 28 TMEGATSLMYAAQQG-------------KDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEA 94 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g-------------~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 94 (321)
+.+|.||||+|+..| +.+++++|++.++......|..|.||||+|+..|+.+++++|++++.+ ++.
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~ 85 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANI 85 (253)
T ss_dssp ---------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCC
Confidence 456999999999987 899999999999886666789999999999999999999999999988 688
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHHHcCC-CCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHh
Q psy138 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRA-NVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYAS 173 (321)
Q Consensus 95 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~ 173 (321)
.+..|.||||+|+..|+.+++++|++++. +++..+..|.|||++|+..++.+++++|++.|++++..+..|.||+|+|+
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAA 165 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 89999999999999999999999999987 89999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHc
Q psy138 174 QMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASR 253 (321)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 253 (321)
. ..+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..
T Consensus 166 ~------------~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 233 (253)
T 1yyh_A 166 A------------VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER 233 (253)
T ss_dssp H------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred H------------cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHc
Confidence 7 4458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhh
Q psy138 254 GHRECLETLITL 265 (321)
Q Consensus 254 ~~~~~~~~Ll~~ 265 (321)
|+.+++++|...
T Consensus 234 g~~~i~~~l~~~ 245 (253)
T 1yyh_A 234 MHHDIVRLLDLE 245 (253)
T ss_dssp TCHHHHHHHHC-
T ss_pred CCHHHHHHHHHH
Confidence 999999999984
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.1e-44 Score=281.70 Aligned_cols=196 Identities=22% Similarity=0.261 Sum_probs=169.9
Q ss_pred cccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHH
Q psy138 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHL 105 (321)
Q Consensus 26 ~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 105 (321)
..+.+|.||||+|+..|+.+++++|++.+.. ++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 112 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHY 112 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 3467799999999999999999999998765 888899999999999999999999999999988 67888999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccc
Q psy138 106 AAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGND 185 (321)
Q Consensus 106 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 185 (321)
|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------------- 167 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI------------------------- 167 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-------------------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-------------------------
Confidence 9999999999999999999999999999999999999999988888877665544
Q ss_pred hhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhh
Q psy138 186 VRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITL 265 (321)
Q Consensus 186 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 265 (321)
.+..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..++.+++++|.+
T Consensus 168 --------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~- 226 (231)
T 3aji_A 168 --------------------QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG- 226 (231)
T ss_dssp --------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH-
T ss_pred --------------------cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc-
Confidence 44556677777777788888888888888888888888888888888788888888777
Q ss_pred cCCC
Q psy138 266 CGAD 269 (321)
Q Consensus 266 ~~~~ 269 (321)
.|++
T Consensus 227 ~~a~ 230 (231)
T 3aji_A 227 EEAS 230 (231)
T ss_dssp HHHC
T ss_pred cccc
Confidence 3543
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.3e-43 Score=279.05 Aligned_cols=213 Identities=25% Similarity=0.385 Sum_probs=204.8
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhh
Q psy138 92 IEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHY 171 (321)
Q Consensus 92 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~ 171 (321)
.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.|++++..+..|.||++.
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccccccchhhhHHHHHHHHHcC-CCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHH
Q psy138 172 ASQMCGHASEMGNDVRVGLAVLKVLLHHN-VDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA 250 (321)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a 250 (321)
|+. ....+++++|++.+ .+++..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|
T Consensus 84 A~~------------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 84 AAK------------KGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWA 151 (237)
T ss_dssp HHH------------TTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHH------------cCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 987 34589999999998 88999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 251 ASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 251 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++
T Consensus 152 ~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 152 AFSGCVDIAEILLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCA 217 (237)
T ss_dssp HHHCCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHS
T ss_pred HHCCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 99999999999999 6999999999999999999999999999999999999999999999999985
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-45 Score=293.06 Aligned_cols=227 Identities=25% Similarity=0.326 Sum_probs=143.3
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCcc-------ccccCCCCCcHHHHHHHhCCH-HHHHHHHHcCCCCccCCCCCCcHH
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDL-------IEAADEDGYTPLHLAAIAGNV-PLIHTLLAHRANVNSQDNEGHSVV 136 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-------~~~~~~~~~t~l~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~l 136 (321)
+.++|+.|+..|+.++|++|++.+... .+..+..+.|||++|+..++. .++++|++.|++++..+..|.|||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 334444444444444444444433321 233345566677666666554 356666667777776667777777
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHH
Q psy138 137 HWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216 (321)
Q Consensus 137 ~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 216 (321)
|+|+..|+.+++++|++.|++++..+..|.||++.++. ....+++++|++.|++++..+..|.||||+
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~------------~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~ 158 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQ------------QGHFQVVKCLLDSNAKPNKKDLSGNTPLIY 158 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHH------------HTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred HHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccc------------cChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 77777777777777777777776666677777776665 333567777777777888888889999999
Q ss_pred HHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCC-HHHHHH
Q psy138 217 AASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGH-ADATTL 295 (321)
Q Consensus 217 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~-~~~~~~ 295 (321)
|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++ .|+|++.+|..|.||||+|+++++ .+++++
T Consensus 159 A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~ 237 (269)
T 4b93_B 159 ACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNSKIMELLQV 237 (269)
T ss_dssp HHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC
T ss_pred HHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 699999999999999999988775 355556
Q ss_pred HHHcCCCCC
Q psy138 296 LLQYGATPN 304 (321)
Q Consensus 296 Ll~~ga~~~ 304 (321)
|.+.++.++
T Consensus 238 l~~~~~~~~ 246 (269)
T 4b93_B 238 VPSCVASLD 246 (269)
T ss_dssp ---------
T ss_pred HHHhchhhh
Confidence 666665443
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.2e-43 Score=277.74 Aligned_cols=214 Identities=27% Similarity=0.382 Sum_probs=200.4
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHH----cCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCc
Q psy138 92 IEAADEDGYTPLHLAAIAGNVPLIHTLLA----HRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGY 167 (321)
Q Consensus 92 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~ 167 (321)
.+..|.+|.||||+|+..|+.+++++|++ .|.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 35678899999999999999999999997 79999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcccccccccchhhhHHHHHHHHHcCC----CCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCccccc-CC
Q psy138 168 PIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNV----DVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHD-KD 242 (321)
Q Consensus 168 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~ 242 (321)
|+++|+. ....+++++|++.+. +++..+..|.||||.|+..|+.+++++|+++|++++..+ ..
T Consensus 82 ~l~~A~~------------~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 149 (241)
T 1k1a_A 82 AAHLACE------------HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKS 149 (241)
T ss_dssp HHHHHHH------------TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTT
T ss_pred HHHHHHH------------cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccC
Confidence 9999997 345799999999987 888889999999999999999999999999999999998 88
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceeec
Q psy138 243 GLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 243 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~ 318 (321)
|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 224 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 224 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCS
T ss_pred CCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999 69999999999999999999999999999999999999999999999999864
No 27
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=274.76 Aligned_cols=232 Identities=24% Similarity=0.325 Sum_probs=175.8
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
+..|.++|+.|++.|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++++.......+..|.||||+|+
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 34577777777777777777777776644 66667777777777777777777777777777655455555777777777
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchh
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVR 187 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (321)
..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|+++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~----------------------------- 135 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV----------------------------- 135 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------------------
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-----------------------------
Confidence 777777777777777777777777777777777777777777776665554
Q ss_pred hhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCC-HHHHHHHHHcCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHhh
Q psy138 188 VGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGS-SDAILALVKAGANVEAHDK-DGLTALHCAASRGHRECLETLITL 265 (321)
Q Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~ 265 (321)
+..+..|.||||.|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 136 ----------------~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~- 198 (240)
T 3eu9_A 136 ----------------DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE- 198 (240)
T ss_dssp ----------------TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHH-
T ss_pred ----------------cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHH-
Confidence 4445556677777775554 7888888889988888876 88899999999999999999998
Q ss_pred cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q psy138 266 CGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQ 306 (321)
Q Consensus 266 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~ 306 (321)
.|++++.++..|.||+++|++.++.+++++|+++|++....
T Consensus 199 ~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~ 239 (240)
T 3eu9_A 199 AGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYD 239 (240)
T ss_dssp HTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC------
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCcC
Confidence 59999999999999999999999999999999998776543
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.8e-43 Score=275.13 Aligned_cols=209 Identities=26% Similarity=0.353 Sum_probs=94.4
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcC--CCCcc-CCCCCCcHHHHHHh
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHR--ANVNS-QDNEGHSVVHWATV 141 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~--~~~~~-~~~~~~t~l~~a~~ 141 (321)
|.||||.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|+++| .+++. .+..|.|||++|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 4455555555555555555555554443444555555555555555555555555555 33333 44455555555555
Q ss_pred cCCHHHHHHHHHcC--CCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHh
Q psy138 142 CGEVEALETVLSAG--AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS 219 (321)
Q Consensus 142 ~~~~~i~~~L~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 219 (321)
.|+.+++++|+++| .+++..+..|.||++.|+. ....+++++|+++|.+++..+..|.||||+|+.
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG------------KKWFEVSQFLIENGASVRIKDKFNQIPLHRAAS 149 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHH------------TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHH------------cCCHhHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 55555555555443 2222222111111111111 000112222222222223333334444555555
Q ss_pred cCCHHHHHHHHHcC-CCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHH
Q psy138 220 AGSSDAILALVKAG-ANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAV 285 (321)
Q Consensus 220 ~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~ 285 (321)
.|+.+++++|+++| ++++..|..|.||||+|+..++.+++++|++..|++++.+|..|.||+++|+
T Consensus 150 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 150 VGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred cCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 55555555555555 5555555555555555555555555555552245555555555555555553
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-43 Score=289.64 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=202.8
Q ss_pred cccccccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCc
Q psy138 22 DKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYT 101 (321)
Q Consensus 22 ~~~~~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 101 (321)
......+.+|.|+||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++.+ ++..+..|.|
T Consensus 31 ~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t 108 (299)
T 1s70_B 31 RKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWI 108 (299)
T ss_dssp CSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCc
Confidence 33444556799999999999999999999998866 888899999999999999999999999999988 6888899999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCchhhhHhhhccccc
Q psy138 102 PLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSA-GAEPSTPDIHGGYPIHYASQMCGHAS 180 (321)
Q Consensus 102 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 180 (321)
|||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++++.. +.+++.....+.
T Consensus 109 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~-------------- 174 (299)
T 1s70_B 109 PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE-------------- 174 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHH--------------
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhh--------------
Confidence 99999999999999999999999999999999999999999999999988864 333221111000
Q ss_pred ccccchhhhHHHHHHHHH-cCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHH
Q psy138 181 EMGNDVRVGLAVLKVLLH-HNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL 259 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 259 (321)
......+..++. ........+..|.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++
T Consensus 175 ------~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v 248 (299)
T 1s70_B 175 ------RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248 (299)
T ss_dssp ------HHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred ------hHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHH
Confidence 111223333333 3344444567788888888888888888888888888888888888888888888888888
Q ss_pred HHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy138 260 ETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQY 299 (321)
Q Consensus 260 ~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 299 (321)
++|++ .|++++.+|..|.||+++|++. ..+.++.+++.
T Consensus 249 ~~Ll~-~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 249 RILVE-NLCDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp HHHHH-TTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred HHHHH-cCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 88888 6888888888888888888654 34444444443
No 30
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-42 Score=284.52 Aligned_cols=260 Identities=27% Similarity=0.354 Sum_probs=220.7
Q ss_pred HHHHcCCHHHHHHHHHcCCCc--------ccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q psy138 37 YAAQQGKDAEVKAILASRPNA--------VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 37 ~A~~~g~~~~~~~ll~~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 108 (321)
.+++.+..+.++.++...... ....+..|.||||.|+..|+.+++++|++++.+ ++..+..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence 467778888888888776432 112345678999999999999999999999988 68889999999999999
Q ss_pred hCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhh
Q psy138 109 AGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRV 188 (321)
Q Consensus 109 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (321)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+. ..
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------------~~ 150 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE------------EA 150 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS------------HH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh------------cc
Confidence 999999999999999999999999999999999999999999999999999999999999999986 34
Q ss_pred hHHHHHHHHH-cCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcC-CCcccccCCCCcHHHHHHHcCCHHHHHHHHhhc
Q psy138 189 GLAVLKVLLH-HNVDVNVVDKDGRQPILWAASAGSSDAILALVKAG-ANVEAHDKDGLTALHCAASRGHRECLETLITLC 266 (321)
Q Consensus 189 ~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 266 (321)
..+++++++. .+.+++.....+.++++ ..+..++..+ ......+..|.||||+|+..|+.+++++|++ .
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ 221 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-A 221 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT-T
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH-c
Confidence 4677776665 46655543333223332 2334445444 4444567899999999999999999999999 7
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceeec
Q psy138 267 GADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 267 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~ 318 (321)
|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus 222 g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 222 RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999863
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.5e-44 Score=289.26 Aligned_cols=246 Identities=13% Similarity=0.134 Sum_probs=218.5
Q ss_pred HHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHH
Q psy138 39 AQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTL 118 (321)
Q Consensus 39 ~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~L 118 (321)
++..+.+.++.+|..+ .++.+|..|.||||+|+..|+.+++++|++++.+ ++.. +|.||||+|+..|+.+++++|
T Consensus 7 i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp GGGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred HHhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 3455666667777665 3788899999999999999999999999999877 3444 589999999999999999999
Q ss_pred HHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC-CchhhhHhhhcccccccccchhhhHHHHHHHH
Q psy138 119 LAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHG-GYPIHYASQMCGHASEMGNDVRVGLAVLKVLL 197 (321)
Q Consensus 119 l~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (321)
+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..| .||+++|+. ..+.+++++|+
T Consensus 82 l~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~------------~~~~~~v~~Ll 149 (285)
T 3kea_A 82 LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM------------LNDVSIVSYFL 149 (285)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH------------TTCHHHHHHHH
T ss_pred HHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH------------cCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 899999987 34579999999
Q ss_pred HcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcH-HHHHHHcCCHHHHHHHHhhcCCCcccCCCC
Q psy138 198 HHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTA-LHCAASRGHRECLETLITLCGADVDVIDTN 276 (321)
Q Consensus 198 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 276 (321)
++|.+.... ..|.||||+|+..|+.+++++|+++|++++..+..|.|| ||+|+..++.+++++|++ +|++++.++.
T Consensus 150 ~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~-~gad~~~~~~- 226 (285)
T 3kea_A 150 SEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFK-YDINIYSANL- 226 (285)
T ss_dssp TTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTT-SCBCSTTTTG-
T ss_pred hCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCh-
Confidence 999876322 278999999999999999999999999999999999998 999999999999999999 7999999883
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Q psy138 277 GCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310 (321)
Q Consensus 277 g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 310 (321)
.|+..|+.+++++|+++|++++......
T Consensus 227 ------~a~~~~~~~iv~~Ll~~g~~~~~~~~~~ 254 (285)
T 3kea_A 227 ------ENVLLDDAEIAKMIIEKHVEYKSDSYTK 254 (285)
T ss_dssp ------GGGTTTCHHHHHHHHHHHHHHTTCTTTT
T ss_pred ------hhhhcCCHHHHHHHHHcCCCCCCccccc
Confidence 5577999999999999999877655433
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.1e-43 Score=285.56 Aligned_cols=249 Identities=20% Similarity=0.170 Sum_probs=194.0
Q ss_pred ccccChhHHHHHHHcCCHHHHHHHHHcCCC--cccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHH
Q psy138 27 NTMEGATSLMYAAQQGKDAEVKAILASRPN--AVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLH 104 (321)
Q Consensus 27 ~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~ 104 (321)
.+.+|.||||+|++.|+.+++++|++.+.. .++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 356699999999999999999999988765 3788899999999999999999999999999988 6788899999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCccC-------------CCCCCcHHHHHHhcCCH-HHHHHHHHcCCCCCCCCCCCCchhh
Q psy138 105 LAAIAGNVPLIHTLLAHRANVNSQ-------------DNEGHSVVHWATVCGEV-EALETVLSAGAEPSTPDIHGGYPIH 170 (321)
Q Consensus 105 ~A~~~~~~~~v~~Ll~~~~~~~~~-------------~~~~~t~l~~a~~~~~~-~i~~~L~~~~~~~~~~~~~~~~~l~ 170 (321)
+|+..|+.+++++|+++|++.... ...+.++++.+...+.. .....+...+.+++..+..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 999999999999999998764322 12344566555554433 3444455567778889999999999
Q ss_pred hHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCC-CCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHH
Q psy138 171 YASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDK-DGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHC 249 (321)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 249 (321)
+|+. ..+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 164 ~A~~------------~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 164 VAVI------------HKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231 (282)
T ss_dssp HHHH------------TTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHH------------cCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHH
Confidence 9997 3458999999999999999885 49999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCC
Q psy138 250 AASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGH 289 (321)
Q Consensus 250 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 289 (321)
|+..++.+++++|++ +|++++.++..|.||+++|.....
T Consensus 232 A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 232 ALLRPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHTSSCHHHHHHHHH-TTCCCCCCC---------------
T ss_pred HHHcCCcHHHHHHHH-cCCCcCcCCCcccccccccCCccc
Confidence 999999999999999 799999999999999999986553
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=270.76 Aligned_cols=197 Identities=26% Similarity=0.346 Sum_probs=169.1
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
+..|.||||.|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|++.+.. ++..+..|.||||+|+
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~ 117 (240)
T 3eu9_A 39 DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAA 117 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHH
Confidence 466999999999999999999999999886666667799999999999999999999999887 6778899999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCC-HHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccch
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE-VEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~-~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (321)
..|+.+++++|+++|++++..+..|.|||++|+..+. .+++++|++.|++
T Consensus 118 ~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~----------------------------- 168 (240)
T 3eu9_A 118 QFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS----------------------------- 168 (240)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-----------------------------
T ss_pred HcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC-----------------------------
Confidence 9999999999999999999999999999999996654 5555555555544
Q ss_pred hhhHHHHHHHHHcCCCCcccCC-CCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhh
Q psy138 187 RVGLAVLKVLLHHNVDVNVVDK-DGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITL 265 (321)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 265 (321)
++..+. .|.||||.|+..|+.+++++|+++|++++..+..|.||+++|+..++.+++++|++
T Consensus 169 ----------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~- 231 (240)
T 3eu9_A 169 ----------------VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE- 231 (240)
T ss_dssp ----------------TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH-
T ss_pred ----------------cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-
Confidence 444443 67789999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcc
Q psy138 266 CGADVD 271 (321)
Q Consensus 266 ~~~~~~ 271 (321)
.+.+..
T Consensus 232 ~~~~~~ 237 (240)
T 3eu9_A 232 ARQAKG 237 (240)
T ss_dssp HC----
T ss_pred hhhccC
Confidence 465543
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-42 Score=271.17 Aligned_cols=216 Identities=26% Similarity=0.308 Sum_probs=157.9
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q psy138 76 TILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155 (321)
Q Consensus 76 ~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~ 155 (321)
|+.+++++|++++..+....+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34455555555555543334555555555555555555555555555555555555555555555555555555555555
Q ss_pred C-CCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCC
Q psy138 156 A-EPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA 234 (321)
Q Consensus 156 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 234 (321)
. +++..+..|.||++.|+. ....+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAAR------------LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHH------------HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCcccCCCCCCcHHHHHHH------------hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 4 455555555555555554 223456666666666677777888999999999999999999999999
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy138 235 NVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPN 304 (321)
Q Consensus 235 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~ 304 (321)
+++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||+++|++.++.+++++|+++|+...
T Consensus 150 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 150 NKDMQNNREETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCCCcCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999 699999999999999999999999999999999998643
No 35
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=279.71 Aligned_cols=211 Identities=24% Similarity=0.307 Sum_probs=171.9
Q ss_pred ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC--------CccCCCCCCcHHHHHHhcCCH-HHHHHHHHcCCCCCCCCCC
Q psy138 94 AADEDGYTPLHLAAIAGNVPLIHTLLAHRAN--------VNSQDNEGHSVVHWATVCGEV-EALETVLSAGAEPSTPDIH 164 (321)
Q Consensus 94 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~--------~~~~~~~~~t~l~~a~~~~~~-~i~~~L~~~~~~~~~~~~~ 164 (321)
..|..+.+||+.|+..|+.++|++|++.|++ ++..+..+.|||+.|+..+.. .++++|++.|++++..+..
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 4566678999999999999999999998775 455677889999999987765 5889999999999999999
Q ss_pred CCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCC
Q psy138 165 GGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGL 244 (321)
Q Consensus 165 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~ 244 (321)
|.||||+|+.. .+.+++++|++.+++++..+..|.||++.|+..++.+++++|+++|++++.+|..|.
T Consensus 86 G~TpLh~A~~~------------g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~ 153 (269)
T 4b93_B 86 GSSPLHVAALH------------GRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGN 153 (269)
T ss_dssp SCCHHHHHHHT------------TCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCC
T ss_pred CCCHHHHHHHc------------CcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCC
Confidence 99999999974 346899999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 245 TALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 245 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++|||++.+|..|+||||++
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred CHHHHHHHCCCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999999999999999 7999999999999999999999999999999999999999999999999986
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.8e-42 Score=269.43 Aligned_cols=219 Identities=24% Similarity=0.369 Sum_probs=202.6
Q ss_pred ChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhC--CccccccCCCCCcHHHHHHH
Q psy138 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVA--PDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~l~~A~~ 108 (321)
|.||||.|++.|+.+++++|++.++.....++..|.||||+|+..|+.+++++|++++ .......+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 6899999999999999999999998877778999999999999999999999999998 55333378899999999999
Q ss_pred hCCHHHHHHHHHcC--CCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccch
Q psy138 109 AGNVPLIHTLLAHR--ANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186 (321)
Q Consensus 109 ~~~~~~v~~Ll~~~--~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (321)
.|+.+++++|+++| ++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||+|+|+..
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~----------- 150 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV----------- 150 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT-----------
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc-----------
Confidence 99999999999998 88999999999999999999999999999999999999999999999999973
Q ss_pred hhhHHHHHHHHHcC-CCCcccCCCCCchhHHHHhcCCHHHHHHHH-HcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy138 187 RVGLAVLKVLLHHN-VDVNVVDKDGRQPILWAASAGSSDAILALV-KAGANVEAHDKDGLTALHCAASRGHRECLETLIT 264 (321)
Q Consensus 187 ~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 264 (321)
.+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+ ++|++++.+|..|.||+++|+.. ++.++|++
T Consensus 151 -~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 151 -GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp -TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred -CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 4579999999999 999999999999999999999999999999 89999999999999999999654 56677765
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.3e-42 Score=272.17 Aligned_cols=218 Identities=19% Similarity=0.232 Sum_probs=190.9
Q ss_pred ccccCCccHHHHHHHcCcHHHHHHHHHhCCc---cccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHH
Q psy138 60 ERDRTRKTVLHYCAENTILSCAETILEVAPD---LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVV 136 (321)
Q Consensus 60 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l 136 (321)
.+|..|.||||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 4577899999999999999999999887653 3677888899999999999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHH
Q psy138 137 HWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216 (321)
Q Consensus 137 ~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 216 (321)
|+|+..|+.+++++|++.+.++... ..++..+..|.||||+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~---------------------------------------~~~~~~~~~g~t~L~~ 123 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLH---------------------------------------SILKATNYNGHTCLHL 123 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSS---------------------------------------CGGGCCCTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhHH---------------------------------------HHhhccCCCCCCHHHH
Confidence 9999999999999999987764321 1134566789999999
Q ss_pred HHhcCCHHHHHHHHHcCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHH
Q psy138 217 AASAGSSDAILALVKAGANVEAHDK-DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTL 295 (321)
Q Consensus 217 a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 295 (321)
|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++
T Consensus 124 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~ 202 (236)
T 1ikn_D 124 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQ 202 (236)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHH
Confidence 9999999999999999999999997 99999999999999999999999 699999999999999999999999999999
Q ss_pred HHHcCCCCC--ccCCCCCccceee
Q psy138 296 LLQYGATPN--RQDRKGRTYEYQW 317 (321)
Q Consensus 296 Ll~~ga~~~--~~~~~g~t~l~~~ 317 (321)
|+++|+++. .++..|.||.+..
T Consensus 203 Ll~~ga~~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 203 LGQLTLENLQMLPESEDEESYDTE 226 (236)
T ss_dssp HHTTSCGGGSSCCCCCTTTCCCCC
T ss_pred HHHcchhhhhcCCccchHHHHhhh
Confidence 999999876 9999999998764
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-40 Score=260.95 Aligned_cols=216 Identities=22% Similarity=0.282 Sum_probs=183.6
Q ss_pred CCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHc
Q psy138 42 GKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAH 121 (321)
Q Consensus 42 g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 121 (321)
|+.+++++|++.+.......|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 5667778888877765555578888888888888888888888888777 567778888888888888888888888888
Q ss_pred CC-CCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcC
Q psy138 122 RA-NVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHN 200 (321)
Q Consensus 122 ~~-~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (321)
+. +++..+..|.|||++|+..++.+++++|++.|++++..+..|.||+|+|+. ..+.+++++|+++|
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------------~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA------------VNNVDAAVVLLKNG 148 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------------TTCHHHHHHHHHTT
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHH------------cCCHHHHHHHHHcC
Confidence 76 777888888888888888888888888888888888888888888888886 33478888888889
Q ss_pred CCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcc
Q psy138 201 VDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVD 271 (321)
Q Consensus 201 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 271 (321)
++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+..++.+++++|++ +|+...
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~-~g~~~~ 218 (223)
T 2f8y_A 149 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE-YNLVRS 218 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCSSC
T ss_pred CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH-cCCCcc
Confidence 8999889999999999999999999999999999999999999999999999999999999999 687644
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-42 Score=286.29 Aligned_cols=253 Identities=16% Similarity=0.120 Sum_probs=202.3
Q ss_pred cCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccc-----------------cCCCCCcHH
Q psy138 41 QGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEA-----------------ADEDGYTPL 103 (321)
Q Consensus 41 ~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------------~~~~~~t~l 103 (321)
....+++++|++.+.. ++.++..|.|+++ |+.++++.|++++.+. +. ......+..
T Consensus 29 ~~~~dlv~~ll~~ga~-i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 29 TFTHDLTSDFLSSPLK-IMKALPSPVVNDN-----EQKMKLEAFLQRLLFP-EIQEMPTSLNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp ECCTTCCCSTTTSSCC-CEECBCCCCCCCH-----HHHHHHHHHHHHHHC------------------------------
T ss_pred hhcCchHHHHhhCCcc-cccCCCCCCcccC-----chhHHHHHHHHhccCC-ccccchHhhhcccccccccccCCccchh
Confidence 4555778888887766 8888999999988 9999999999987552 11 111122345
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCcc-CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhccccccc
Q psy138 104 HLAAIAGNVPLIHTLLAHRANVNS-QDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEM 182 (321)
Q Consensus 104 ~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 182 (321)
|+|+..+..+++++|++.|++++. .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+....
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~----- 176 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN----- 176 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH-----
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc-----
Confidence 788888889999999999999999 89999999999999999999999999999999999999999999997422
Q ss_pred ccchhhhHHHHHHHHHcC-CCCcccCCCCCchhHHHHh----cCCHHHHHHHHHc--------------------CCCcc
Q psy138 183 GNDVRVGLAVLKVLLHHN-VDVNVVDKDGRQPILWAAS----AGSSDAILALVKA--------------------GANVE 237 (321)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~----~~~~~~~~~Ll~~--------------------~~~~~ 237 (321)
....++++.|++.+ .+++..+..|.||||+|+. .|+.+++++|++. |++++
T Consensus 177 ----~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~ 252 (327)
T 1sw6_A 177 ----NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 252 (327)
T ss_dssp ----HHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------
T ss_pred ----cccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc
Confidence 01134556666654 6789999999999999999 8999999999987 89999
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 238 AHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 238 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
..+..|.||||.|+. +++|++. +++.+|..|+||||+|+..|+.+++++|+++||+++.+|..|+||||++
T Consensus 253 ~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 253 DKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp -------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred cccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 999999999999985 8999994 6899999999999999999999999999999999999999999999986
Q ss_pred c
Q psy138 318 R 318 (321)
Q Consensus 318 ~ 318 (321)
-
T Consensus 324 ~ 324 (327)
T 1sw6_A 324 A 324 (327)
T ss_dssp C
T ss_pred H
Confidence 3
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.3e-40 Score=257.50 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=140.8
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC-----ccCCCCCCcHHHHH
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANV-----NSQDNEGHSVVHWA 139 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~-----~~~~~~~~t~l~~a 139 (321)
|.||||+|+..|+.+++++|++.....++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 4444444444444444444444411113444444444444444444444444444444443 33344555555555
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHh
Q psy138 140 TVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS 219 (321)
Q Consensus 140 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 219 (321)
+..|+.+++++|+++|++++..+.... + ....+..+..|.||||+|+.
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~--~------------------------------~~~~~~~~~~g~t~L~~A~~ 130 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSV--F------------------------------HYRPHNLIYYGEHPLSFAAC 130 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGG--G------------------------------SCCTTCSCCCCSSHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcc--e------------------------------eecccccccCCCCHHHHHHH
Confidence 555555555555555555444332110 0 01234456789999999999
Q ss_pred cCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHH----HHHHhhcCCCc------ccCCCCCCcHHHHHHHcCC
Q psy138 220 AGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL----ETLITLCGADV------DVIDTNGCSALFYAVTLGH 289 (321)
Q Consensus 220 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~----~~Ll~~~~~~~------~~~~~~g~t~l~~A~~~~~ 289 (321)
.|+.+++++|+++|++++.+|..|.||||+|+..++.+++ ++|++ .|++. +.+|..|.||||+|++.|+
T Consensus 131 ~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 131 VGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999988 99999 69888 5889999999999999999
Q ss_pred HHHHHHHHHcCCCCCccC
Q psy138 290 ADATTLLLQYGATPNRQD 307 (321)
Q Consensus 290 ~~~~~~Ll~~ga~~~~~~ 307 (321)
.+++++|+++|+....+.
T Consensus 210 ~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 210 IVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhcCccchhhh
Confidence 999999999998766554
No 41
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.7e-40 Score=268.00 Aligned_cols=215 Identities=16% Similarity=0.148 Sum_probs=196.9
Q ss_pred CcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q psy138 76 TILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155 (321)
Q Consensus 76 ~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~ 155 (321)
...++.++|.+.+ ++..|..|.||||+|+..|+.+++++|+++|++++.. +|.||||+|+..|+.+++++|+++|
T Consensus 11 ~~~~v~~lL~~~~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g 85 (285)
T 3kea_A 11 KSKQLKSFLSSKD---TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSG 85 (285)
T ss_dssp CHHHHHHHHHSTT---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred CHHHHHHHHHhCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 4456666665542 5788999999999999999999999999999999887 4899999999999999999999999
Q ss_pred CCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCC-CchhHHHHhcCCHHHHHHHHHcCC
Q psy138 156 AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDG-RQPILWAASAGSSDAILALVKAGA 234 (321)
Q Consensus 156 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~~~ 234 (321)
++++..+..|.||+|+|+. ..+.+++++|+++|++++..+..| .||||.|+..|+.+++++|+++|+
T Consensus 86 a~~~~~d~~g~t~L~~A~~------------~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 86 LDDSQFDDKGNTALYYAVD------------SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHH------------TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred CCCCCcCCCCCcHHHHHHH------------cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 9999999999999999997 345899999999999999999999 899999999999999999999998
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCccCCC
Q psy138 235 NVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSA-LFYAVTLGHADATTLLLQYGATPNRQDRK 309 (321)
Q Consensus 235 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~-l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~ 309 (321)
+.... ..|.||||+|+..|+.+++++|++ .|++++.+|..|.|| ||+|+..++.+++++|+++|++++.+|..
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~ 227 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLE 227 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHH-HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTGG
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHH-cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCChh
Confidence 87332 389999999999999999999999 699999999999998 99999999999999999999999999863
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.6e-37 Score=238.09 Aligned_cols=193 Identities=24% Similarity=0.347 Sum_probs=164.9
Q ss_pred cCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhc
Q psy138 63 RTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVC 142 (321)
Q Consensus 63 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 142 (321)
..+.||||.|+..|+.+.++.|++.++..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45778888888888888888888877755677778888888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCC
Q psy138 143 GEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGS 222 (321)
Q Consensus 143 ~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 222 (321)
|+.+++++|++. .+.+++..+..|.||||.|+..|+
T Consensus 83 ~~~~~~~~Ll~~--------------------------------------------~~~~~~~~~~~g~t~L~~A~~~~~ 118 (201)
T 3hra_A 83 GRTEILAYMLKH--------------------------------------------ATPDLNKHNRYGGNALIPAAEKGH 118 (201)
T ss_dssp TCHHHHHHHHHH--------------------------------------------SCCCTTCCCTTSCCSHHHHHHTTC
T ss_pred CCHHHHHHHHhc--------------------------------------------cCcccccccCCCCcHHHHHHHcCC
Confidence 888877777742 223455566778889999999999
Q ss_pred HHHHHHHHHcC-CCcccccCCCCcHHHHHHHcCC-----HHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy138 223 SDAILALVKAG-ANVEAHDKDGLTALHCAASRGH-----RECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLL 296 (321)
Q Consensus 223 ~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 296 (321)
.+++++|+++| ++++..+..|.||||+|+..++ .+++++|++ .|++++.+|..|.||||+|+..|+.+++++|
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L 197 (201)
T 3hra_A 119 IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME-NGADQSIKDNSGRTAMDYANQKGYTEISKIL 197 (201)
T ss_dssp HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHH
Confidence 99999999999 8999999999999999999998 999999999 6999999999999999999999999999999
Q ss_pred HHcC
Q psy138 297 LQYG 300 (321)
Q Consensus 297 l~~g 300 (321)
+++|
T Consensus 198 l~~G 201 (201)
T 3hra_A 198 AQYN 201 (201)
T ss_dssp HTCC
T ss_pred HhcC
Confidence 9987
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=6.9e-39 Score=258.63 Aligned_cols=223 Identities=17% Similarity=0.187 Sum_probs=145.5
Q ss_pred cccCCccHHHHHHHcCcHHHHHHHHHh----CCcccc---ccCCCCCcHHHHHHHh---CCHHHHHHHHHcCCC------
Q psy138 61 RDRTRKTVLHYCAENTILSCAETILEV----APDLIE---AADEDGYTPLHLAAIA---GNVPLIHTLLAHRAN------ 124 (321)
Q Consensus 61 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~---~~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~------ 124 (321)
.|..|.||||.|++.|+.++++.|++. +..+.. ..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 344444555555555555444444442 111100 2234455555555543 455555555554432
Q ss_pred -----CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHc
Q psy138 125 -----VNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHH 199 (321)
Q Consensus 125 -----~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (321)
....+..|.||||+|+..|+.+++++|+++|++++..+..+...
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~------------------------------- 137 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK------------------------------- 137 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGS-------------------------------
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccc-------------------------------
Confidence 11234567777777777777777777777777766655432100
Q ss_pred CCCCcccCCCCCchhHHHHhcCCHHHHHHHHH---cCCCcccccCCCCcHHHHHHHcCC---------HHHHHHHHhhcC
Q psy138 200 NVDVNVVDKDGRQPILWAASAGSSDAILALVK---AGANVEAHDKDGLTALHCAASRGH---------RECLETLITLCG 267 (321)
Q Consensus 200 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~ 267 (321)
..+....+..|.||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|++ .|
T Consensus 138 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~g 216 (273)
T 2pnn_A 138 KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI-LG 216 (273)
T ss_dssp SCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH-hh
Confidence 01234456789999999999999999999999 999999999999999999999998 899999999 69
Q ss_pred CCcc-------cCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCccce
Q psy138 268 ADVD-------VIDTNGCSALFYAVTLGHADATTLLLQYGA-TPNRQDRKGRTYEY 315 (321)
Q Consensus 268 ~~~~-------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga-~~~~~~~~g~t~l~ 315 (321)
++++ .+|..|.||||+|+..|+.+++++|+++|| |+......+.+|-+
T Consensus 217 a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 217 AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------
T ss_pred hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9997 489999999999999999999999999999 89888888877643
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-37 Score=245.63 Aligned_cols=200 Identities=24% Similarity=0.311 Sum_probs=167.6
Q ss_pred cChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccc----cccCCCCCcHHHH
Q psy138 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLI----EAADEDGYTPLHL 105 (321)
Q Consensus 30 ~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----~~~~~~~~t~l~~ 105 (321)
.|.||||.|++.|+.+++++|++..+.+++.+|..|.||||+|+..|+.+++++|++.++... +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 489999999999999999999998667799999999999999999999999999999988742 4556789999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccCCC-------------CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhH
Q psy138 106 AAIAGNVPLIHTLLAHRANVNSQDN-------------EGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYA 172 (321)
Q Consensus 106 A~~~~~~~~v~~Ll~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~ 172 (321)
|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.||+|+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999988765 799999999999999999999999999999999999999999
Q ss_pred hhhcccccccccchhhhHHHHHHHHHcCCCC------cccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcc
Q psy138 173 SQMCGHASEMGNDVRVGLAVLKVLLHHNVDV------NVVDKDGRQPILWAASAGSSDAILALVKAGANVE 237 (321)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 237 (321)
+..... ....+++++|++.|.++ +..+..|.||||+|+..|+.+++++|+++|.+..
T Consensus 162 ~~~~~~--------~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 162 ILQPNK--------TFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HTCSCH--------HHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHcCCh--------HHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 874221 11122337777777766 3556666777777777777777777776665443
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.5e-38 Score=254.26 Aligned_cols=206 Identities=20% Similarity=0.200 Sum_probs=143.8
Q ss_pred CccHHHHHHHcCcHH----HHHHHHHhCCccccc----cCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCcc------
Q psy138 65 RKTVLHYCAENTILS----CAETILEVAPDLIEA----ADEDGYTPLHLAAIA---GNVPLIHTLLAHRANVNS------ 127 (321)
Q Consensus 65 g~t~L~~A~~~~~~~----~v~~Ll~~~~~~~~~----~~~~~~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~------ 127 (321)
|.||||.|+..|+.+ ++++|++.+.+ ++. .+..|.||||+|+.. |+.+++++|+++|++++.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 344444444444443 33333334443 222 344444555555544 445555555544443331
Q ss_pred -----CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCC
Q psy138 128 -----QDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVD 202 (321)
Q Consensus 128 -----~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 202 (321)
.+..|.||||+|+..|+.+++++|+++|++++..+..+..+ .+
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~--------------------------------~~ 128 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ--------------------------------KH 128 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS--------------------------------CC
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc--------------------------------cc
Confidence 22456666666666666666666666666665554433211 12
Q ss_pred CcccCCCCCchhHHHHhcCCHHHHHHHHH---cCCCcccccCCCCcHHHHHHH--cCCHH-------HHHHHHhhcCCCc
Q psy138 203 VNVVDKDGRQPILWAASAGSSDAILALVK---AGANVEAHDKDGLTALHCAAS--RGHRE-------CLETLITLCGADV 270 (321)
Q Consensus 203 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~ 270 (321)
.+..+..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|++ .|+++
T Consensus 129 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~ 207 (256)
T 2etb_A 129 QGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ-MGARL 207 (256)
T ss_dssp SSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHH
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH-cCCCc
Confidence 23345569999999999999999999999 999999999999999999999 88888 9999999 69999
Q ss_pred -------ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy138 271 -------DVIDTNGCSALFYAVTLGHADATTLLLQYGATPN 304 (321)
Q Consensus 271 -------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~ 304 (321)
+.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 208 ~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 208 CPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp STTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999997654
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-39 Score=269.47 Aligned_cols=253 Identities=20% Similarity=0.203 Sum_probs=193.4
Q ss_pred ceehhhccCCCcccccCcccccccccccChhHHHHHHHcCCHHHHHHHHHcCCCcccc-----------------cccCC
Q psy138 3 DVISIFLSKPNLVWENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRE-----------------RDRTR 65 (321)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~-----------------~~~~g 65 (321)
+++++|++++... +. .+..|.++++ |+.++++.||+.+... +. +....
T Consensus 33 dlv~~ll~~ga~i--------~~-~~~~g~~~~~-----g~~~~v~~Ll~~g~~~-~~~~~~~a~~~~~~~~~~~~~~~~ 97 (327)
T 1sw6_A 33 DLTSDFLSSPLKI--------MK-ALPSPVVNDN-----EQKMKLEAFLQRLLFP-EIQEMPTSLNNDSSNRNSEGGSSN 97 (327)
T ss_dssp TCCCSTTTSSCCC--------EE-CBCCCCCCCH-----HHHHHHHHHHHHHHC--------------------------
T ss_pred chHHHHhhCCccc--------cc-CCCCCCcccC-----chhHHHHHHHHhccCC-ccccchHhhhcccccccccccCCc
Confidence 4566666664322 21 1234777776 9999999999987441 11 11122
Q ss_pred ccHHHHHHHcCcHHHHHHHHHhCCccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCC
Q psy138 66 KTVLHYCAENTILSCAETILEVAPDLIEA-ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE 144 (321)
Q Consensus 66 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 144 (321)
.+..|.|+..+..+++++|++.+.+ ++. .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ------CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred cchhHHHHHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 2345888888889999999999888 566 89999999999999999999999999999999999999999999999998
Q ss_pred ---HHHHHHHHHcC-CCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHc--------------------C
Q psy138 145 ---VEALETVLSAG-AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHH--------------------N 200 (321)
Q Consensus 145 ---~~i~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------~ 200 (321)
.++++.|++.+ .+++..+..|.||||+|+..... ..+.+++++|++. +
T Consensus 177 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~--------~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g 248 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGM--------TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 248 (327)
T ss_dssp HHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTS--------TTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----
T ss_pred cccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccc--------cccHHHHHHHHHHHHHHHhcccchHHHhhhhccc
Confidence 68888888876 67888999999999999874221 2347888888876 8
Q ss_pred CCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcH
Q psy138 201 VDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSA 280 (321)
Q Consensus 201 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 280 (321)
++++..+..|.||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|.||
T Consensus 249 ~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 249 SKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLD-YGADPFIANKSGLRP 319 (327)
T ss_dssp -----------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHH-TTCCTTCCCTTSCCG
T ss_pred CCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCH
Confidence 8999999999999999985 8999988 588899999999999999999999999999 799999999999999
Q ss_pred HHHHHHcC
Q psy138 281 LFYAVTLG 288 (321)
Q Consensus 281 l~~A~~~~ 288 (321)
||+|++.|
T Consensus 320 L~~A~~~g 327 (327)
T 1sw6_A 320 VDFGAGLE 327 (327)
T ss_dssp GGGTCC--
T ss_pred HHHHHhcC
Confidence 99998764
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-36 Score=233.68 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=160.5
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 108 (321)
..+.||||.|+..|+.+.+++++..++.+++..+..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 35889999999999999999999999977999999999999999999999999999999988 67888999999999999
Q ss_pred hCCHHHHHHHH-HcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCchhhhHhhhcccccccccch
Q psy138 109 AGNVPLIHTLL-AHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG-AEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186 (321)
Q Consensus 109 ~~~~~~v~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (321)
.|+.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|++.| .+++..+..
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~---------------------- 139 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF---------------------- 139 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT----------------------
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC----------------------
Confidence 99999999999 567799999999999999999999999999999887 555554444
Q ss_pred hhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCC-----HHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHH
Q psy138 187 RVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGS-----SDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLET 261 (321)
Q Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 261 (321)
|.||||.|+..++ .+++++|+++|++++.++..|.||||+|+..|+.+++++
T Consensus 140 -----------------------g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 196 (201)
T 3hra_A 140 -----------------------GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196 (201)
T ss_dssp -----------------------SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred -----------------------CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHH
Confidence 4555555555554 667777777777777777777777777777777777777
Q ss_pred HHh
Q psy138 262 LIT 264 (321)
Q Consensus 262 Ll~ 264 (321)
|++
T Consensus 197 Ll~ 199 (201)
T 3hra_A 197 LAQ 199 (201)
T ss_dssp HHT
T ss_pred HHh
Confidence 766
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.7e-38 Score=250.92 Aligned_cols=213 Identities=21% Similarity=0.249 Sum_probs=167.2
Q ss_pred ccccChhHHHHHHHcCCHHHHHHHHHcCCC---cccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHH
Q psy138 27 NTMEGATSLMYAAQQGKDAEVKAILASRPN---AVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPL 103 (321)
Q Consensus 27 ~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 103 (321)
.+.+|.||||+|+..|+.+++++|++.+.. .++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHH
Confidence 456799999999999999999999988764 5888899999999999999999999999999988 678889999999
Q ss_pred HHHHHhCCHHHHHHHHHcCCC------CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcc
Q psy138 104 HLAAIAGNVPLIHTLLAHRAN------VNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 104 ~~A~~~~~~~~v~~Ll~~~~~------~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 177 (321)
|+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 148 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP-------------- 148 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT--------------
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------
Confidence 999999999999999999876 466777899999999999988888888887766654432
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRE 257 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 257 (321)
..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+
T Consensus 149 ------------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 149 ------------------------------CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp ------------------------------TTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred ------------------------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchH
Confidence 14666667777777777777777777777777777777777777777777
Q ss_pred HHHHHHhhcCCCcc--cCCCCCCcHHHHHH
Q psy138 258 CLETLITLCGADVD--VIDTNGCSALFYAV 285 (321)
Q Consensus 258 ~~~~Ll~~~~~~~~--~~~~~g~t~l~~A~ 285 (321)
++++|++ +|++.. .++..|.||.+.+.
T Consensus 199 ~~~~Ll~-~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 199 IQQQLGQ-LTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp HHHHHHT-TSCGGGSSCCCCCTTTCCCCC-
T ss_pred HHHHHHH-cchhhhhcCCccchHHHHhhhc
Confidence 7777777 576655 55666666655443
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=7.8e-37 Score=227.06 Aligned_cols=159 Identities=36% Similarity=0.545 Sum_probs=134.0
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhccccc
Q psy138 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHAS 180 (321)
Q Consensus 101 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 180 (321)
++|+.|++.|+.++|++|+++|++++.++..|.|||++|+..++.+++++|++.|++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad----------------------- 62 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD----------------------- 62 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-----------------------
Confidence 467888888888888888888888888888888888888888777777766665554
Q ss_pred ccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHH
Q psy138 181 EMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLE 260 (321)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 260 (321)
++..+..|.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.++++
T Consensus 63 ----------------------~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 120 (169)
T 4gpm_A 63 ----------------------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 120 (169)
T ss_dssp ----------------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ----------------------hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 4455667888899999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q psy138 261 TLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNR 305 (321)
Q Consensus 261 ~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~ 305 (321)
+|++ .|++++.+|..|.|||++|++.|+.+++++|+++||+++-
T Consensus 121 ~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 121 LLIS-KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999 6999999999999999999999999999999999999864
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.8e-35 Score=219.70 Aligned_cols=159 Identities=33% Similarity=0.503 Sum_probs=132.2
Q ss_pred cHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHH
Q psy138 67 TVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVE 146 (321)
Q Consensus 67 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 146 (321)
+.|+.||+.|+.++|++|++++.+ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 579999999999999999999988 6889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHH
Q psy138 147 ALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAI 226 (321)
Q Consensus 147 i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 226 (321)
++++|+++|++++. ++..|.||||+|+..|+.+++
T Consensus 85 ~v~~Ll~~gadvn~---------------------------------------------~d~~G~TpLh~A~~~g~~~~v 119 (169)
T 4gpm_A 85 VVKLLISKGADVNA---------------------------------------------KDSDGRTPLHHAAENGHKEVV 119 (169)
T ss_dssp HHHHHHHTTCCTTC---------------------------------------------CCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHCcCCCCC---------------------------------------------CCCCCCCHHHHHHHcCCHHHH
Confidence 88888887766554 445566777777777777788
Q ss_pred HHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCccc
Q psy138 227 LALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDV 272 (321)
Q Consensus 227 ~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 272 (321)
++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++.
T Consensus 120 ~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA~ie~ 164 (169)
T 4gpm_A 120 KLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK-QGGWLEH 164 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT-C------
T ss_pred HHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcCC
Confidence 88887787777777778888888888888888888777 5777653
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.3e-36 Score=245.40 Aligned_cols=215 Identities=19% Similarity=0.247 Sum_probs=156.6
Q ss_pred ccccChhHHHHHHHcCCHHHHHHHHHc---CCCccc----ccccCCccHHHHHHHc---CcHHHHHHHHHhCCcc-----
Q psy138 27 NTMEGATSLMYAAQQGKDAEVKAILAS---RPNAVR----ERDRTRKTVLHYCAEN---TILSCAETILEVAPDL----- 91 (321)
Q Consensus 27 ~~~~g~~~L~~A~~~g~~~~~~~ll~~---~~~~~~----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~----- 91 (321)
.+..|.||||.|++.|+.++++.|++. .+..++ .++..|.||||+|+.. |+.+++++|++.++..
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 345699999999999999999999873 222233 3578999999999987 9999999999987541
Q ss_pred -c----cccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCC--------------CCCcHHHHHHhcCCHHHHHHHH
Q psy138 92 -I----EAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDN--------------EGHSVVHWATVCGEVEALETVL 152 (321)
Q Consensus 92 -~----~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~i~~~L~ 152 (321)
+ ...+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 168 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLL 168 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 1 22466899999999999999999999999999999886 7999999999999999999999
Q ss_pred H---cCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCc-------ccCCCCCchhHHHHhcCC
Q psy138 153 S---AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVN-------VVDKDGRQPILWAASAGS 222 (321)
Q Consensus 153 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~t~l~~a~~~~~ 222 (321)
+ .|++++..+..|.||||+|+....... .......+++++|++.|++++ ..+..|.||||+|+..|+
T Consensus 169 ~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~---~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 169 QNSWQPADISARDSVGNTVLHALVEVADNTV---DNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCH---HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred hcccCCCCceeeCCCCCcHHHHHHHccCcch---hHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 9 999999999999999999987432100 000111456666666665554 245555555555555555
Q ss_pred HHHHHHHHHcCC-CcccccCCCC
Q psy138 223 SDAILALVKAGA-NVEAHDKDGL 244 (321)
Q Consensus 223 ~~~~~~Ll~~~~-~~~~~~~~g~ 244 (321)
.+++++|+++|+ |+......+.
T Consensus 246 ~~iv~~Ll~~ga~dp~~~~~~~~ 268 (273)
T 2pnn_A 246 IGVLAYILQREIHEPECRHAAAH 268 (273)
T ss_dssp HHHHHHHHHHHTC----------
T ss_pred HHHHHHHHHCCCCCchhhhhhhh
Confidence 555555555555 4444333333
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.1e-36 Score=240.86 Aligned_cols=202 Identities=16% Similarity=0.213 Sum_probs=157.0
Q ss_pred ChhHHHHHHHcCCHH----HHHHHHHcCCCcccc----cccCCccHHHHHHHc---CcHHHHHHHHHhCCcccc------
Q psy138 31 GATSLMYAAQQGKDA----EVKAILASRPNAVRE----RDRTRKTVLHYCAEN---TILSCAETILEVAPDLIE------ 93 (321)
Q Consensus 31 g~~~L~~A~~~g~~~----~~~~ll~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~------ 93 (321)
|.||||.|++.|+.+ +++++++.+.. ++. +|..|.||||+|+.. |+.+++++|++.+.....
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 889999999999997 45555566655 676 799999999999999 999999999998765321
Q ss_pred ----ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCC-------------CCcHHHHHHhcCCHHHHHHHHH---
Q psy138 94 ----AADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNE-------------GHSVVHWATVCGEVEALETVLS--- 153 (321)
Q Consensus 94 ----~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~i~~~L~~--- 153 (321)
..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 23467999999999999999999999999999998876 9999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCC-------cccCCCCCchhHHHHhcCCHHHH
Q psy138 154 AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDV-------NVVDKDGRQPILWAASAGSSDAI 226 (321)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~ 226 (321)
.|++++..+..|.||||+|+........ ......+++++|+++|+++ +..+..|.||||+|+..|+.+++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~---~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPE---NSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHH---HHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCch---hhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence 9999999999999999999873211000 0000112666666666666 55556666666666666666666
Q ss_pred HHHHHcCCCc
Q psy138 227 LALVKAGANV 236 (321)
Q Consensus 227 ~~Ll~~~~~~ 236 (321)
++|+++|.+.
T Consensus 238 ~~Ll~~g~~~ 247 (256)
T 2etb_A 238 RHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhCCCCC
Confidence 6666655443
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.1e-35 Score=238.30 Aligned_cols=195 Identities=17% Similarity=0.237 Sum_probs=153.0
Q ss_pred CCCcHHHHHHHhCCHHH----HHHHHHcCCCCccCC----CCCCcHHHHHH---hcCCHHHHHHHHHcC-----------
Q psy138 98 DGYTPLHLAAIAGNVPL----IHTLLAHRANVNSQD----NEGHSVVHWAT---VCGEVEALETVLSAG----------- 155 (321)
Q Consensus 98 ~~~t~l~~A~~~~~~~~----v~~Ll~~~~~~~~~~----~~~~t~l~~a~---~~~~~~i~~~L~~~~----------- 155 (321)
.+.++||.|+..|+.+. +++|++.|++++..+ ..|.||||+|+ ..|+.+++++|++.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 44555555555555553 223333555554333 44555555555 445555555555554
Q ss_pred CCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccC--------------CCCCchhHHHHhcC
Q psy138 156 AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVD--------------KDGRQPILWAASAG 221 (321)
Q Consensus 156 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~t~l~~a~~~~ 221 (321)
......+..|.||||+|+. ..+.+++++|+++|++++..+ ..|.||||+|+..|
T Consensus 84 ~~~~~~d~~g~t~L~~A~~------------~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIE------------RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp CCBCCSSEESBCHHHHHHH------------TTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred ccccccccCCCCHHHHHHH------------cCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC
Confidence 3344556689999999987 445899999999999999988 68999999999999
Q ss_pred CHHHHHHHHH---cCCCcccccCCCCcHHHHHHHcCC---------HHHHHHHHhhcCCCc-------ccCCCCCCcHHH
Q psy138 222 SSDAILALVK---AGANVEAHDKDGLTALHCAASRGH---------RECLETLITLCGADV-------DVIDTNGCSALF 282 (321)
Q Consensus 222 ~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~~g~t~l~ 282 (321)
+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|++ .|+++ +.+|..|.||||
T Consensus 152 ~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 152 QPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhhcccCCCCCHHH
Confidence 9999999999 999999999999999999999888 799999999 69998 679999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCc
Q psy138 283 YAVTLGHADATTLLLQYGATPNR 305 (321)
Q Consensus 283 ~A~~~~~~~~~~~Ll~~ga~~~~ 305 (321)
+|+..|+.+++++|+++|+++..
T Consensus 231 ~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHhCCCccc
Confidence 99999999999999999976543
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=234.07 Aligned_cols=194 Identities=22% Similarity=0.365 Sum_probs=163.4
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCC--CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCchhhhHhhhc
Q psy138 100 YTPLHLAAIAGNVPLIHTLLAHRAN--VNSQDNEGHSVVHWATVCGEVEALETVLSAGA-EPSTPDIHGGYPIHYASQMC 176 (321)
Q Consensus 100 ~t~l~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~-~~~~~~~~~~~~l~~~~~~~ 176 (321)
.+++|.|+..++.+.++.+++.+.+ ++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.||++.++...
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 4566777777777777777666544 66677777777777777777777777777776 77777777777777776321
Q ss_pred ccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCH
Q psy138 177 GHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHR 256 (321)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 256 (321)
. ......+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 157 ~-------~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~ 229 (276)
T 4hbd_A 157 L-------KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHK 229 (276)
T ss_dssp C-------CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred h-------hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 1 114567899999999988888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 257 ECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 257 ~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
+++++|++..|++++.+|..|.|||++|+..|+.+++++|++++
T Consensus 230 ~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 230 EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999669999999999999999999999999999999975
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=3.4e-34 Score=229.54 Aligned_cols=208 Identities=17% Similarity=0.188 Sum_probs=149.8
Q ss_pred ChhHHHHHHHcCCHHHHHHHHH----cCCCcccccc----cCCccHHHHHH---HcCcHHHHHHHHHhCCcc--------
Q psy138 31 GATSLMYAAQQGKDAEVKAILA----SRPNAVRERD----RTRKTVLHYCA---ENTILSCAETILEVAPDL-------- 91 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~~~~~-------- 91 (321)
|.++||.|++.|+.+.++.|++ .+.. ++..+ ..|.||||+|+ ..|+.+++++|++.+...
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 6777888888888775555544 4443 44333 56777777777 567777777777765331
Q ss_pred --ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchh
Q psy138 92 --IEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPI 169 (321)
Q Consensus 92 --~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l 169 (321)
....+..|.||||+|+..|+.+++++|+++|++++..+..+.. ...+....+..|.|||
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~-------------------~~~~~~~~~~~g~tpL 144 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFF-------------------QPKDEGGYFYFGELPL 144 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCC-------------------SSSCCCCSCCSCSSHH
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccccc-------------------CcccccccccCCCCHH
Confidence 1222335566666666666666666666666665554432100 0012222336789999
Q ss_pred hhHhhhcccccccccchhhhHHHHHHHHH---cCCCCcccCCCCCchhHHHHhcCC---------HHHHHHHHHcCCCc-
Q psy138 170 HYASQMCGHASEMGNDVRVGLAVLKVLLH---HNVDVNVVDKDGRQPILWAASAGS---------SDAILALVKAGANV- 236 (321)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~- 236 (321)
|+|+. ..+.+++++|++ .|++++..+..|.||||+|+..++ .+++++|+++|+++
T Consensus 145 ~~A~~------------~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 145 SLAAC------------TNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHH------------TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH------------cCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 99987 345899999999 999999999999999999998887 79999999999998
Q ss_pred ------ccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcc
Q psy138 237 ------EAHDKDGLTALHCAASRGHRECLETLITLCGADVD 271 (321)
Q Consensus 237 ------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 271 (321)
+..|..|.||||+|+..|+.+++++|++ +|.+..
T Consensus 213 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~ 252 (260)
T 3jxi_A 213 PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR-REIADA 252 (260)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHHHHH
T ss_pred cccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH-hCCCcc
Confidence 6789999999999999999999999999 465543
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.6e-33 Score=211.35 Aligned_cols=169 Identities=24% Similarity=0.371 Sum_probs=142.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCC-CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcc
Q psy138 99 GYTPLHLAAIAGNVPLIHTLLAHRAN-VNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 99 ~~t~l~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 177 (321)
+.||||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------- 62 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP------------------- 62 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-------------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-------------------
Confidence 35788888888888888888888776 7777888888888888888888777777765554
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRE 257 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 257 (321)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+
T Consensus 63 --------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 116 (172)
T 3v30_A 63 --------------------------HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVK 116 (172)
T ss_dssp --------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred --------------------------hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 444566778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcc
Q psy138 258 CLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTY 313 (321)
Q Consensus 258 ~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~ 313 (321)
++++|++ .|++++.+|..|.|||++|+..++.+++++|+++|+++..++..|.||
T Consensus 117 ~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 117 CVEALLA-RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHH-cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999 699999999999999999999999999999999999999999999988
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=227.09 Aligned_cols=192 Identities=23% Similarity=0.321 Sum_probs=177.0
Q ss_pred CCccHHHHHHHcCcHHHHHHHHHhCCc-cccccCCCCCcHHHHHHHhCCHHHHHHHHHcCC-CCccCCCCCCcHHHHHH-
Q psy138 64 TRKTVLHYCAENTILSCAETILEVAPD-LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRA-NVNSQDNEGHSVVHWAT- 140 (321)
Q Consensus 64 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~l~~a~- 140 (321)
.+.+++|.|+..++.+.++.+++...+ .++..|..|.||||+|+..|+.+++++|++.|+ +++..+..|.|||++|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 356788999999999999999887543 357788999999999999999999999999998 99999999999999999
Q ss_pred ----hcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHH
Q psy138 141 ----VCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216 (321)
Q Consensus 141 ----~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 216 (321)
..++.+++++|++.|......+..|.||||+|+.. ...+++++|++.|++++..+..|.||||+
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~------------g~~~~v~~Ll~~gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSH------------GRVDVVKALLACEADVNVQDDDGSTALMC 222 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHT------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHc------------CCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Confidence 67889999999999999999999999999999974 45899999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHH-cCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcC
Q psy138 217 AASAGSSDAILALVK-AGANVEAHDKDGLTALHCAASRGHRECLETLITLCG 267 (321)
Q Consensus 217 a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 267 (321)
|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++..+
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 999999999999999 899999999999999999999999999999999644
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.2e-33 Score=211.89 Aligned_cols=163 Identities=27% Similarity=0.419 Sum_probs=140.2
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhh
Q psy138 92 IEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHY 171 (321)
Q Consensus 92 ~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~ 171 (321)
.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|+++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------- 94 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV------------- 94 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-------------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-------------
Confidence 4566788899999999999999999999988888888888899999998888888888777766554
Q ss_pred HhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHH
Q psy138 172 ASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAA 251 (321)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~ 251 (321)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 95 --------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 142 (192)
T 2rfm_A 95 --------------------------------NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVAS 142 (192)
T ss_dssp --------------------------------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred --------------------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 344556778888888888999999999999999988999999999999
Q ss_pred HcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 252 SRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 252 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
..|+.+++++|++ .|++++.+|..|.||+++|+..|+.+++++|+++|
T Consensus 143 ~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 143 KYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999998 69999999999999999999999999999998875
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=8.5e-33 Score=207.37 Aligned_cols=170 Identities=21% Similarity=0.292 Sum_probs=110.6
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCC
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE 144 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 144 (321)
+.||||.|+..|+.+++++|++.++..++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 34677777777777777777777766566667777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHH
Q psy138 145 VEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSD 224 (321)
Q Consensus 145 ~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 224 (321)
.+++++|+++|++++ ..+..|.||||+|+..|+.+
T Consensus 82 ~~~v~~Ll~~g~~~~---------------------------------------------~~~~~g~t~L~~A~~~~~~~ 116 (172)
T 3v30_A 82 TDIVGLLLERDVDIN---------------------------------------------IYDWNGGTPLLYAVRGNHVK 116 (172)
T ss_dssp HHHHHHHHTTTCCTT---------------------------------------------CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCC---------------------------------------------CCCCCCCCHHHHHHHcCCHH
Confidence 776666666554433 23344556666666666666
Q ss_pred HHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcH
Q psy138 225 AILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSA 280 (321)
Q Consensus 225 ~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 280 (321)
++++|+++|++++..+..|.||||+|+..++.+++++|++ +++++..++..|.||
T Consensus 117 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~-~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 117 CVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN-HILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-HHHHHSCC-------
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH-HHHHHhcccCCCCCC
Confidence 6666666666666666666677777777777777777666 466666666666555
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.8e-32 Score=203.56 Aligned_cols=158 Identities=29% Similarity=0.355 Sum_probs=130.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcc
Q psy138 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 98 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 177 (321)
...|||+.|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-------------------- 62 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-------------------- 62 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC--------------------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC--------------------
Confidence 34567777777777777777777777777777777777777766 776666666665544
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRE 257 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 257 (321)
++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 63 -------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 117 (162)
T 1ihb_A 63 -------------------------PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 117 (162)
T ss_dssp -------------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred -------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 4455566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCC-cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy138 258 CLETLITLCGAD-VDVIDTNGCSALFYAVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 258 ~~~~Ll~~~~~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 302 (321)
++++|++ .|++ ++.++..|.||||+|+..++.+++++|+++|||
T Consensus 118 ~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 118 VVEFLVK-HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHH-HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHH-ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999 5877 699999999999999999999999999999986
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.9e-32 Score=207.47 Aligned_cols=162 Identities=25% Similarity=0.365 Sum_probs=143.7
Q ss_pred ccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHH
Q psy138 58 VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVH 137 (321)
Q Consensus 58 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~ 137 (321)
++.+|..|.||||+|+..|+.+++++|++++.. ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 667889999999999999999999999999887 6788889999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHH
Q psy138 138 WATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWA 217 (321)
Q Consensus 138 ~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 217 (321)
+|+..++.+++++|+++|++++ ..+..|.||||+|
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~---------------------------------------------~~~~~g~t~L~~A 141 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVN---------------------------------------------DRNLEGETPLIVA 141 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSS---------------------------------------------CCCTTCCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCC---------------------------------------------CCCCCCCCHHHHH
Confidence 9999999988888887766544 4455677788888
Q ss_pred HhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhh
Q psy138 218 ASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITL 265 (321)
Q Consensus 218 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 265 (321)
+..|+.+++++|+++|++++.++..|.||+|+|+..|+.+++++|++.
T Consensus 142 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 142 SKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 888888888888888888888888888888888888888888888873
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=5.7e-32 Score=202.13 Aligned_cols=159 Identities=36% Similarity=0.478 Sum_probs=136.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhh
Q psy138 96 DEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQM 175 (321)
Q Consensus 96 ~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 175 (321)
...+.++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------- 73 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV----------------- 73 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------
Confidence 345668888888888888888888888888888888888888888888888888777766554
Q ss_pred cccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCC
Q psy138 176 CGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGH 255 (321)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 255 (321)
+..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 74 ----------------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 125 (169)
T 2y1l_E 74 ----------------------------NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH 125 (169)
T ss_dssp ----------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ----------------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 3445567788888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 256 RECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 256 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
.+++++|++ .|++++.+|..|.||+++|+..++.+++++|+++|
T Consensus 126 ~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 126 LEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999 69999999999999999999999999999999876
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.2e-32 Score=203.18 Aligned_cols=161 Identities=25% Similarity=0.403 Sum_probs=139.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcc
Q psy138 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 98 ~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 177 (321)
.|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------------ 63 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ------------------ 63 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT------------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC------------------
Confidence 46788888888888888888888888888888888888888888888888887777665543
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRE 257 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 257 (321)
..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 64 ---------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 116 (167)
T 3v31_A 64 ---------------------------LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVK 116 (167)
T ss_dssp ---------------------------CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred ---------------------------CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 34556778888888999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy138 258 CLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPN 304 (321)
Q Consensus 258 ~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~ 304 (321)
++++|++ .|++++.++..|.||+++|+..|+.+++++|+++++++.
T Consensus 117 ~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 117 CVKMLLE-SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999 699999999999999999999999999999999886543
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1.8e-31 Score=201.39 Aligned_cols=168 Identities=20% Similarity=0.299 Sum_probs=155.0
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 108 (321)
.++.++|+.|++.|+.+++++|++.++.+++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHH
Confidence 34789999999999999999999998888999999999999999999999999999999988 68888999999999999
Q ss_pred hCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhh
Q psy138 109 AGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRV 188 (321)
Q Consensus 109 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (321)
.|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||+++|+. ..
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~------------~~ 149 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKA------------PL 149 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCH------------HH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHH------------HH
Confidence 999999999999999999999999999999999999999999999999999999999999999976 45
Q ss_pred hHHHHHHHHHcCCCCcccCCC
Q psy138 189 GLAVLKVLLHHNVDVNVVDKD 209 (321)
Q Consensus 189 ~~~~~~~l~~~~~~~~~~~~~ 209 (321)
..+++++|++.|.+++..+..
T Consensus 150 ~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 150 RELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp HHHHHHHHHHTTCCCSCBCCC
T ss_pred HHHHHHHHHHhhcCcccCCcc
Confidence 578999999999998876544
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.3e-31 Score=198.86 Aligned_cols=159 Identities=30% Similarity=0.456 Sum_probs=137.5
Q ss_pred ccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHH
Q psy138 60 ERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139 (321)
Q Consensus 60 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a 139 (321)
.....+.++|+.|++.|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 3445678999999999999999999999987 678889999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHh
Q psy138 140 TVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS 219 (321)
Q Consensus 140 ~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 219 (321)
+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~---------------------------------------------~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNA---------------------------------------------NDMEGHTPLHLAAM 122 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC---------------------------------------------CCTTSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCC---------------------------------------------CCCCCCCHHHHHHH
Confidence 999999988888887665543 44556778888888
Q ss_pred cCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy138 220 AGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLIT 264 (321)
Q Consensus 220 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 264 (321)
.|+.+++++|+++|++++.++..|.||+++|+..++.+++++|++
T Consensus 123 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 123 FGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 888888888888888888888888888888888888888888887
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.2e-31 Score=199.15 Aligned_cols=158 Identities=27% Similarity=0.334 Sum_probs=132.5
Q ss_pred CCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcC
Q psy138 64 TRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG 143 (321)
Q Consensus 64 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 143 (321)
...||||.|+..|+.+++++|++++.. ++..+..|.||||+|+. |+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 467999999999999999999999887 68889999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCH
Q psy138 144 EVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSS 223 (321)
Q Consensus 144 ~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 223 (321)
+.+++++|+++|++++. .+..|.||||+|+..|+.
T Consensus 82 ~~~~v~~Ll~~g~~~~~---------------------------------------------~~~~g~t~L~~A~~~~~~ 116 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNI---------------------------------------------EDNEGNLPLHLAAKEGHL 116 (162)
T ss_dssp CHHHHHHHHHTTCCTTC---------------------------------------------CCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHcCCCCCC---------------------------------------------cCCCCCCHHHHHHHcCCH
Confidence 99988888887666544 444566777777777777
Q ss_pred HHHHHHHHcCCC-cccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCC
Q psy138 224 DAILALVKAGAN-VEAHDKDGLTALHCAASRGHRECLETLITLCGAD 269 (321)
Q Consensus 224 ~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 269 (321)
+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++ +|+|
T Consensus 117 ~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~GAd 162 (162)
T 1ihb_A 117 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA-NGAG 162 (162)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TC--
T ss_pred HHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH-hCCC
Confidence 888888877776 47777778888888888888888888887 5664
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=1.1e-31 Score=202.56 Aligned_cols=168 Identities=24% Similarity=0.322 Sum_probs=144.9
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHc-CCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhh
Q psy138 97 EDGYTPLHLAAIAGNVPLIHTLLAH-RANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQM 175 (321)
Q Consensus 97 ~~~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 175 (321)
..+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------- 65 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI----------------- 65 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----------------
Confidence 3567888888888888888888887 5667888888888888888888887777777665554
Q ss_pred cccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCC
Q psy138 176 CGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGH 255 (321)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 255 (321)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 66 ----------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 66 ----------------------------NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQ 117 (179)
T ss_dssp ----------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred ----------------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 4455667889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Q psy138 256 RECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310 (321)
Q Consensus 256 ~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 310 (321)
.+++++|++ .|++++.+|..|.||+++|+..++.+++++|+++|++++..+..+
T Consensus 118 ~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 118 DQVAEDLVA-NGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HHHHHHHHH-CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 999999999 699999999999999999999999999999999999999888666
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=3.6e-31 Score=197.47 Aligned_cols=155 Identities=22% Similarity=0.344 Sum_probs=136.5
Q ss_pred CCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcC
Q psy138 64 TRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG 143 (321)
Q Consensus 64 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 143 (321)
.|.||||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 588999999999999999999999877 7888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCH
Q psy138 144 EVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSS 223 (321)
Q Consensus 144 ~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 223 (321)
+.+++++|+++|++++ ..+..|.||||+|+..|+.
T Consensus 81 ~~~~v~~Ll~~g~~~~---------------------------------------------~~~~~g~t~L~~A~~~~~~ 115 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVN---------------------------------------------EYDWNGGTPLLYAVHGNHV 115 (167)
T ss_dssp CHHHHHHHHHHTCCTT---------------------------------------------CCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHCCCCCC---------------------------------------------cCCCCCCCHHHHHHHcCCH
Confidence 9998888887766544 3445567777778888888
Q ss_pred HHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy138 224 DAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLIT 264 (321)
Q Consensus 224 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 264 (321)
+++++|+++|++++..+..|.||+|+|+..|+.+++++|++
T Consensus 116 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 116 KCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 88888888888888888888888888888888888888887
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.98 E-value=1.1e-34 Score=227.09 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=72.5
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 108 (321)
.+|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+.
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 3455555555555555555555554433 444555555555555555555555555555444 34444555555555555
Q ss_pred hCCHHHHHHHHHcCCCCccCC-CCCCcHHHHH--HhcCCHHHHHHHHHcCCCCCCCCCCCCchhh
Q psy138 109 AGNVPLIHTLLAHRANVNSQD-NEGHSVVHWA--TVCGEVEALETVLSAGAEPSTPDIHGGYPIH 170 (321)
Q Consensus 109 ~~~~~~v~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~ 170 (321)
.|+.+++++|+++|++++..+ ..|.|||++| +..++.+++++|++.|++++..+..+.++++
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 555555555555555555443 3555555555 5555555555555555555555544444444
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.98 E-value=1e-34 Score=227.17 Aligned_cols=201 Identities=17% Similarity=0.183 Sum_probs=171.1
Q ss_pred HHHHHHcCCCc--ccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy138 47 VKAILASRPNA--VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRAN 124 (321)
Q Consensus 47 ~~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~ 124 (321)
++.||+.+... .+..+..+.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 35677777553 344566778999999999999999999999987 688899999999999999999999999999999
Q ss_pred CccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCchhhhH--hhhcccccccccchhhhHHHHHHHHHcCC
Q psy138 125 VNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPD-IHGGYPIHYA--SQMCGHASEMGNDVRVGLAVLKVLLHHNV 201 (321)
Q Consensus 125 ~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (321)
++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||+++| +. ....+++++|++.|+
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~------------~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYR------------EGYADCATYLADVEQ 147 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTS------------TTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHh------------cChHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999886 6999999998 54 456899999999999
Q ss_pred CCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCC--cccccCCCCcHHHHHHHcCCHHHHHHHH
Q psy138 202 DVNVVDKDGRQPILWAASAGSSDAILALVKAGAN--VEAHDKDGLTALHCAASRGHRECLETLI 263 (321)
Q Consensus 202 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 263 (321)
+++..+..+.+|++.++..... ++|++.|++ ++.+|..|+||||+|+..|+.++++.++
T Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 148 SMGLMNSGAVYALWDYSAEFGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HTTTSGGGEEEESSCBCCSSTT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred CcccccCCchHHHHHHhhcccc---ccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 9999999999999976655433 577888988 6778999999999999999999887644
No 71
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.98 E-value=2.2e-35 Score=245.85 Aligned_cols=255 Identities=16% Similarity=0.145 Sum_probs=133.9
Q ss_pred hHHHHHHH-cCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCcc--ccccCCCCCcHHHHHHHh
Q psy138 33 TSLMYAAQ-QGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDL--IEAADEDGYTPLHLAAIA 109 (321)
Q Consensus 33 ~~L~~A~~-~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~~~t~l~~A~~~ 109 (321)
+.+++|.. .++.+.++++++.+.. +.||||+|++.|+.+++++|++++... ....+..|.||||+|+..
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~--------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK--------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC--------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC--------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 34444444 3445555555544322 346666666666666666666655411 112233445566666666
Q ss_pred CCHHHHHHHHHcCCCC---ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC--CCCCCCchhhhHh-hhcccccccc
Q psy138 110 GNVPLIHTLLAHRANV---NSQDNEGHSVVHWATVCGEVEALETVLSAGAEPST--PDIHGGYPIHYAS-QMCGHASEMG 183 (321)
Q Consensus 110 ~~~~~v~~Ll~~~~~~---~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~--~~~~~~~~l~~~~-~~~~~~~~~~ 183 (321)
|+.+++++|+++|+++ +..+.+ .||||+|+..|+.+++++|+++|++++. .+..|.||+|+|+ .
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~--------- 208 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG--------- 208 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST---------
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHH---------
Confidence 6666666666666431 111112 5666666666666666666666665544 4555666666665 4
Q ss_pred cchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccC-------CCC----cH------
Q psy138 184 NDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDK-------DGL----TA------ 246 (321)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-------~g~----t~------ 246 (321)
.++.+++++|++.|. .+.|||+.|+..|+.+++++|+++|++++..+. .|. ++
T Consensus 209 ---~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~ 278 (376)
T 2aja_A 209 ---RGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQG 278 (376)
T ss_dssp ---TCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHH
T ss_pred ---CCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhh
Confidence 223566666665442 145666666666666666666666655443321 110 00
Q ss_pred ---HHHHHH---cCCHHHHHHHHhhcCC----CcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcccee
Q psy138 247 ---LHCAAS---RGHRECLETLITLCGA----DVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQ 316 (321)
Q Consensus 247 ---l~~a~~---~~~~~~~~~Ll~~~~~----~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~ 316 (321)
+..... .+..+.+++|++..++ +.......+.|||++|+..|+.+++++|+++| .+++..|+|+.++
T Consensus 279 ~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~ 355 (376)
T 2aja_A 279 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYI 355 (376)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC------
T ss_pred HHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhcccc
Confidence 011111 1235566676652111 11122335668999999999999999999876 7778888888777
Q ss_pred ec
Q psy138 317 WR 318 (321)
Q Consensus 317 ~~ 318 (321)
.+
T Consensus 356 ~~ 357 (376)
T 2aja_A 356 NE 357 (376)
T ss_dssp --
T ss_pred cc
Confidence 54
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=4.4e-31 Score=196.63 Aligned_cols=160 Identities=26% Similarity=0.353 Sum_probs=147.4
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAA 107 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~ 107 (321)
..+|.++||.|++.|+.+++++|++.++..+...+..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHH
Confidence 345899999999999999999999988887888899999999999999999999999999988 6888999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchh
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVR 187 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (321)
..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|..
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~------------- 150 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD------------- 150 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-------------
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred hhHHHHHHHHHcCC
Q psy138 188 VGLAVLKVLLHHNV 201 (321)
Q Consensus 188 ~~~~~~~~l~~~~~ 201 (321)
.+.+++++|++.|+
T Consensus 151 ~~~~i~~~L~~~gA 164 (165)
T 3twr_A 151 GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHTC--
T ss_pred CChHHHHHHhhccc
Confidence 23688999888764
No 73
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=2.7e-34 Score=239.36 Aligned_cols=242 Identities=17% Similarity=0.193 Sum_probs=169.6
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCc--ccccccCCccHHHHHHHcCcHHHHHHHHHhCCc----cccccCCCCCc
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNA--VRERDRTRKTVLHYCAENTILSCAETILEVAPD----LIEAADEDGYT 101 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~~~t 101 (321)
..++.||||.|++.|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++++++ .+...+ .|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~T 165 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YH 165 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CC
Confidence 455789999999999999999999988632 223455678999999999999999999999964 122222 89
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcc--CCCCCCcHHHHHH-hcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhccc
Q psy138 102 PLHLAAIAGNVPLIHTLLAHRANVNS--QDNEGHSVVHWAT-VCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGH 178 (321)
Q Consensus 102 ~l~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~t~l~~a~-~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (321)
|||+|+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|++.|. .+.||++.|+..
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~--- 235 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEY--- 235 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTT---
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHC---
Confidence 99999999999999999999999877 7888999999999 9999999999999764 378999998873
Q ss_pred ccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCH---------------------------HHHHHHHH
Q psy138 179 ASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSS---------------------------DAILALVK 231 (321)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~---------------------------~~~~~Ll~ 231 (321)
+..+++++|+++|.+++..+ ++++.|+..|+. +.+++|++
T Consensus 236 ---------g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~ 302 (376)
T 2aja_A 236 ---------GEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 302 (376)
T ss_dssp ---------TTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHT
T ss_pred ---------CCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHh
Confidence 44689999999987765543 234444444443 34455554
Q ss_pred cCC-----CcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy138 232 AGA-----NVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQY 299 (321)
Q Consensus 232 ~~~-----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 299 (321)
.+. +.......+.+|||+|+..|+.+++++|++ .| ..++..+.|++.+|-..|..++.+.-+++
T Consensus 303 ~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~-~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (376)
T 2aja_A 303 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS-IP---SVLALTKANNYYINETGGRLDLRAVALEH 371 (376)
T ss_dssp STTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTT-SH---HHHHSCC----------------------
T ss_pred ChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHc-Ch---HHHHHHHHhccccccccccccHHHHHHHH
Confidence 221 011112346689999999999999999998 44 66788999999999999999988765543
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.6e-30 Score=191.04 Aligned_cols=150 Identities=33% Similarity=0.399 Sum_probs=126.5
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccc
Q psy138 100 YTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHA 179 (321)
Q Consensus 100 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (321)
.+||+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|++.|+++
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------------------- 60 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR--------------------- 60 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT---------------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------
Confidence 478888888888888888888888776 4677888888888888888888777766554
Q ss_pred cccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHH
Q psy138 180 SEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL 259 (321)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 259 (321)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 61 ------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 116 (153)
T 1awc_B 61 ------------------------DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 116 (153)
T ss_dssp ------------------------TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ------------------------CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 34455677888888888889999999999999988888999999999999999999
Q ss_pred HHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy138 260 ETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLL 296 (321)
Q Consensus 260 ~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 296 (321)
++|++ .|++++.+|..|.||+++|+..|+.+++++|
T Consensus 117 ~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 117 ELLIK-YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99998 6999999999999999999999999998886
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.9e-30 Score=190.56 Aligned_cols=151 Identities=23% Similarity=0.280 Sum_probs=132.4
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCC
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE 144 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 144 (321)
..|+|+.|++.|+.+++++|++++... . .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 468999999999999999999999874 3 57889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHH
Q psy138 145 VEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSD 224 (321)
Q Consensus 145 ~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 224 (321)
.+++++|+++|++++ ..+..|.||||+|+..|+.+
T Consensus 80 ~~~v~~Ll~~g~~~~---------------------------------------------~~~~~g~t~L~~A~~~~~~~ 114 (153)
T 1awc_B 80 ANIVEVLLKHGADVN---------------------------------------------AKDMLKMTALHWATEHNHQE 114 (153)
T ss_dssp HHHHHHHHTTTCCTT---------------------------------------------CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCC---------------------------------------------CCCCCCCCHHHHHHHcCCHH
Confidence 998888888766554 34455777888888888888
Q ss_pred HHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHH
Q psy138 225 AILALVKAGANVEAHDKDGLTALHCAASRGHRECLETL 262 (321)
Q Consensus 225 ~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 262 (321)
++++|+++|++++.++..|.||+|+|+..|+.+++++|
T Consensus 115 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 115 VVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 88888888888888888888888888888888888876
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.6e-33 Score=222.44 Aligned_cols=205 Identities=18% Similarity=0.226 Sum_probs=118.6
Q ss_pred CCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcC
Q psy138 64 TRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG 143 (321)
Q Consensus 64 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 143 (321)
.|.||||.|+..++.+.++.|++++.++ +. +..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 3556666666666666666666665552 21 244556666666666666666666666666666666666666666665
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCH
Q psy138 144 EVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSS 223 (321)
Q Consensus 144 ~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 223 (321)
+.+++++|+++ |++++..+..|.||||+|+..|+.
T Consensus 82 ~~~~v~~Ll~~---------------------------------------------ga~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 82 HTEIVKFLVQF---------------------------------------------GVNVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp CHHHHHHHHHH---------------------------------------------TCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHc---------------------------------------------CCCCCccCCCCCCHHHHHHHcCCH
Confidence 55555555544 445555666677888888888888
Q ss_pred HHHHHHHHcCCCcccccCCCC-cHHHHH--HHcCCHHHHHHHHhhcCCCcccC---------CCCCCcHHHHHHHcCCHH
Q psy138 224 DAILALVKAGANVEAHDKDGL-TALHCA--ASRGHRECLETLITLCGADVDVI---------DTNGCSALFYAVTLGHAD 291 (321)
Q Consensus 224 ~~~~~Ll~~~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~---------~~~g~t~l~~A~~~~~~~ 291 (321)
+++++|+++|++++..+..|. ||+|+| +..|+.+++++|++ .|++++.. +..+.++.+++.+.|.
T Consensus 117 ~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~-~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~-- 193 (239)
T 1ycs_B 117 QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG-VQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD-- 193 (239)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH-HHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--
T ss_pred HHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH-hhhcccccccceEEEEeccCCCCCCcccccCCC--
Confidence 888888888888888876666 888888 67788888888888 57777665 5567788888777776
Q ss_pred HHHHHHHcCCC------CCccCCCCCccceeec
Q psy138 292 ATTLLLQYGAT------PNRQDRKGRTYEYQWR 318 (321)
Q Consensus 292 ~~~~Ll~~ga~------~~~~~~~g~t~l~~~~ 318 (321)
+++.|.+.+.+ ....++.|.+|.+|.+
T Consensus 194 ~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 194 CMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp EEEECCCCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred EEEEEEecCCCCCCEEEEEECCcEEEeehHHee
Confidence 44555555544 1456677888888764
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=7.6e-31 Score=195.33 Aligned_cols=157 Identities=24% Similarity=0.278 Sum_probs=120.9
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHh
Q psy138 62 DRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATV 141 (321)
Q Consensus 62 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~ 141 (321)
+..|.|+||.|++.|+.+++++|++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 55678999999999999999999987766667777888899999999999999999999999999988899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcC
Q psy138 142 CGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG 221 (321)
Q Consensus 142 ~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 221 (321)
.++.+++++|+++|++++..+ ..|.||||+|+..|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~---------------------------------------------~~g~t~L~~A~~~~ 119 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVAD---------------------------------------------LWKFTPLHEAAAKG 119 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC---------------------------------------------TTCCCHHHHHHHTT
T ss_pred cCcHHHHHHHHhCCCCCCCcC---------------------------------------------CCCCCHHHHHHHcC
Confidence 988888888887766655544 44556666666666
Q ss_pred CHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy138 222 SSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLIT 264 (321)
Q Consensus 222 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 264 (321)
+.+++++|+++|++++.++..|.||+|+|+. ++.+++++|++
T Consensus 120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 6666666666666666666666666666544 66666666665
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.2e-30 Score=190.09 Aligned_cols=153 Identities=27% Similarity=0.346 Sum_probs=123.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHc-CCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcc
Q psy138 99 GYTPLHLAAIAGNVPLIHTLLAH-RANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 99 ~~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~ 177 (321)
+.|||++|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++.|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~--------------------- 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGA--------------------- 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC---------------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC---------------------
Confidence 34677777777777777777766 33666666677777777 66666666666665544
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHH
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRE 257 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 257 (321)
+++..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 60 ------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 60 ------------------------SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp ------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred ------------------------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHH
Confidence 44555666788888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy138 258 CLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQY 299 (321)
Q Consensus 258 ~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 299 (321)
++++|++ . ++++.+|..|.|||++|+..|+.+++++|+++
T Consensus 116 ~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 116 VVSFLAA-E-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999998 4 89999999999999999999999999999874
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=9.1e-30 Score=187.68 Aligned_cols=154 Identities=24% Similarity=0.275 Sum_probs=143.8
Q ss_pred ChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhC
Q psy138 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAG 110 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~ 110 (321)
|.|+||.|++.|+.+.+++|++..+.+++..+..|.||||+ +..|+.+++++|++++.+ ++..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcC
Confidence 67999999999999999999999656788999999999999 999999999999999988 6888999999999999999
Q ss_pred CHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhH
Q psy138 111 NVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGL 190 (321)
Q Consensus 111 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (321)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. ++++..+..|.||+++|+.. .+.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~------------~~~ 146 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQR------------GAQ 146 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHS------------CCH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHc------------CcH
Confidence 99999999999999999999999999999999999999999999 99999999999999999873 447
Q ss_pred HHHHHHHHc
Q psy138 191 AVLKVLLHH 199 (321)
Q Consensus 191 ~~~~~l~~~ 199 (321)
+++++|+++
T Consensus 147 ~~v~~Ll~~ 155 (156)
T 1bd8_A 147 DLVDILQGH 155 (156)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 888888764
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=3.3e-31 Score=209.19 Aligned_cols=166 Identities=20% Similarity=0.235 Sum_probs=117.6
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhc
Q psy138 97 EDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMC 176 (321)
Q Consensus 97 ~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 176 (321)
..|.||||.|+..++.++++.|+++|++++.. ..|.|||+.|+..|+.+++++|++.|++
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------- 62 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDD------------------- 62 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------------
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCC-------------------
Confidence 46788888888888888888888888888754 6778888888888888888777766554
Q ss_pred ccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCH
Q psy138 177 GHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHR 256 (321)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 256 (321)
++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus 63 --------------------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 63 --------------------------PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp --------------------------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred --------------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 444566688899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccCCCCCC-cHHHHH--HHcCCHHHHHHHHHcCCCCCccCCC
Q psy138 257 ECLETLITLCGADVDVIDTNGC-SALFYA--VTLGHADATTLLLQYGATPNRQDRK 309 (321)
Q Consensus 257 ~~~~~Ll~~~~~~~~~~~~~g~-t~l~~A--~~~~~~~~~~~Ll~~ga~~~~~~~~ 309 (321)
+++++|++ +|++++.++..|. ||+|+| +..|+.+++++|+++|++++.++..
T Consensus 117 ~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 117 QVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp HHHHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred HHHHHHHH-cCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 99999999 7999999998887 999999 7889999999999999999887544
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=2.2e-29 Score=185.48 Aligned_cols=145 Identities=24% Similarity=0.227 Sum_probs=118.7
Q ss_pred CCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCccc
Q psy138 159 STPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEA 238 (321)
Q Consensus 159 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 238 (321)
...+..+.|||+.|+. ....+++++|+++|.+++..+..|.||||+|+ .|+.+++++|+++|++++.
T Consensus 6 ~~~~~~~~t~L~~A~~------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~ 72 (156)
T 1bi7_B 6 GSSMEPSADWLATAAA------------RGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC 72 (156)
T ss_dssp ----CCSTTHHHHHHH------------HTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC
T ss_pred cCCCccchHHHHHHHH------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC
Confidence 3456778999999998 45589999999999999999999999999985 9999999999999999999
Q ss_pred ccCCCCc-HHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceee
Q psy138 239 HDKDGLT-ALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317 (321)
Q Consensus 239 ~~~~g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~ 317 (321)
++..|.| |||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||.+-.
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999 9999999999999999999 6999999999999999999999999999999999999999999999998743
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=9.9e-29 Score=177.60 Aligned_cols=134 Identities=25% Similarity=0.248 Sum_probs=127.0
Q ss_pred CCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCC
Q psy138 155 GAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA 234 (321)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 234 (321)
+++++..+..|.|||+.|+. ..+.+++++|++.|.+++..+..|.||||+|+. ++.+++++|+++|+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~ 68 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAA------------RGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGA 68 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHH------------TTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC
T ss_pred CCCccCCCCCCccHHHHHHH------------cCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC
Confidence 45778888899999999987 445899999999999999999999999999999 99999999999999
Q ss_pred CcccccCC-CCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy138 235 NVEAHDKD-GLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 235 ~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 302 (321)
+++..+.. |.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|||
T Consensus 69 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 69 EPNCADPATLTRPVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CSSCCBTTTTBCHHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999 9999999999999999999999 7999999999999999999999999999999999986
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=4.1e-29 Score=188.57 Aligned_cols=167 Identities=14% Similarity=0.086 Sum_probs=99.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCccCC-CCCCcHHHHHHhcCCH----HHHHHHHHcCCCCCCCCCCCCchhhhHh
Q psy138 99 GYTPLHLAAIAGNVPLIHTLLAHRANVNSQD-NEGHSVVHWATVCGEV----EALETVLSAGAEPSTPDIHGGYPIHYAS 173 (321)
Q Consensus 99 ~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~----~i~~~L~~~~~~~~~~~~~~~~~l~~~~ 173 (321)
+.++|+.|++.|+.+.++.+++.+.+ ..+ ..|.||||+|+..++. +++++|+++|++++.++..|.||||+++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 45678888888888888887776643 333 5677888888877764 3566666666655555555555555554
Q ss_pred hhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCC-cHHHHHHH
Q psy138 174 QMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGL-TALHCAAS 252 (321)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~-t~l~~a~~ 252 (321)
..... ..... .+++++|+++|++++.+|..|. ||||+|+.
T Consensus 84 ~~~~~------~~~~~---------------------------------~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 84 QGGGN------DITGT---------------------------------TELCKIFLEKGADITALYKPYKIVVFKNIFN 124 (186)
T ss_dssp HHCTT------CHHHH---------------------------------HHHHHHHHHTTCCSSSCBGGGTBCTTGGGGG
T ss_pred HcCCc------chhhH---------------------------------HHHHHHHHHCCCCCCccCCCcCchHHHHHHH
Confidence 43211 00112 3455666666666666666666 66666655
Q ss_pred cC-----CHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q psy138 253 RG-----HRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQ 306 (321)
Q Consensus 253 ~~-----~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~ 306 (321)
.+ ..+++++|++..|++++.+|..|.||||+|++.++.+++++|.++..+.+.+
T Consensus 125 ~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 125 YFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp CCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 32 2346666665336666666666666666666666666666666655444443
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=4.5e-28 Score=182.86 Aligned_cols=159 Identities=13% Similarity=0.023 Sum_probs=104.4
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCH----HHHHHHHHcCCCCccCCCCCCcHHHHHH
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNV----PLIHTLLAHRANVNSQDNEGHSVVHWAT 140 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~t~l~~a~ 140 (321)
+.++|+.|++.|+.+.++.++..+... ..+..|.||||+|+..++. +++++|+++|++++.++..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 346777777777777777777765431 1225677888888877764 4788888888888888888888888888
Q ss_pred hcCC------HHHHHHHHHcCCCCCCCCCCCC-chhhhHhhhcccccccccchhhhHHHHHHHHH-cCCCCcccCCCCCc
Q psy138 141 VCGE------VEALETVLSAGAEPSTPDIHGG-YPIHYASQMCGHASEMGNDVRVGLAVLKVLLH-HNVDVNVVDKDGRQ 212 (321)
Q Consensus 141 ~~~~------~~i~~~L~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~t 212 (321)
..++ .+++++|+++|++++.+|..|. ||+|+|+.. +. ......+++++|++ +|++++..+..|.|
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~-~~------~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY-FV------DENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC-CS------CHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc-CC------ChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 8776 5678888888888888888888 788777652 11 00122345555555 55555555555555
Q ss_pred hhHHHHhcCCHHHHHHHHHc
Q psy138 213 PILWAASAGSSDAILALVKA 232 (321)
Q Consensus 213 ~l~~a~~~~~~~~~~~Ll~~ 232 (321)
|||+|+..|+.+++++|.++
T Consensus 157 pL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 55555555555555555543
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=6.3e-28 Score=177.63 Aligned_cols=141 Identities=26% Similarity=0.311 Sum_probs=85.6
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCC
Q psy138 130 NEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209 (321)
Q Consensus 130 ~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (321)
..|.|||++|+..|+.+++++|+++|++++..+..|.||+|+|+ ..+.+++++|+++|++++..+..
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-------------~~~~~~v~~Ll~~g~~~~~~d~~ 76 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-------------MGSARVAELLLLHGAEPNCADPA 76 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-------------TTCHHHHHHHHTTTCCCCCCCTT
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-------------cCCHHHHHHHHHcCCCCCCcCCC
Confidence 33444444444444444444444444444444444444444431 11245555555556666666777
Q ss_pred CCc-hhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHH
Q psy138 210 GRQ-PILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYA 284 (321)
Q Consensus 210 ~~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A 284 (321)
|.| |||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ +|++++.++..|.||.+.+
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC-----------------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccC
Confidence 787 9999999999999999999999999999999999999999999999999999 6999999999999987744
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=3.2e-27 Score=169.68 Aligned_cols=132 Identities=27% Similarity=0.392 Sum_probs=88.6
Q ss_pred CCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCC
Q psy138 124 NVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDV 203 (321)
Q Consensus 124 ~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 203 (321)
+++..+..|.|||++|+..|+.+++++|++.|++++..+..|.||+|+|+. ++ .+++++|+++|+++
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~-----------~~~v~~Ll~~g~~~ 70 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM--GS-----------AQVAELLLLHGAEP 70 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT--SC-----------HHHHHHHHHHTCCS
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc--CC-----------HHHHHHHHHCCCCC
Confidence 344444444444444444444444444444444444444444444444443 11 34555555555666
Q ss_pred cccCCC-CCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCC
Q psy138 204 NVVDKD-GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGAD 269 (321)
Q Consensus 204 ~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 269 (321)
+..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++ +|+|
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~-~Gad 136 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA-ATGD 136 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH-HHCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 666677 7888888999999999999999999999999999999999999999999999998 5764
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=3.6e-27 Score=169.43 Aligned_cols=128 Identities=30% Similarity=0.451 Sum_probs=118.4
Q ss_pred cccccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHH
Q psy138 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHL 105 (321)
Q Consensus 26 ~~~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 105 (321)
.....|.||||.|++.|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHL 86 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHH
Confidence 3445699999999999999999999998765 888899999999999999999999999999887 67888999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q psy138 106 AAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155 (321)
Q Consensus 106 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~ 155 (321)
|+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++|+++|
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999875
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=6.5e-27 Score=165.88 Aligned_cols=126 Identities=37% Similarity=0.566 Sum_probs=119.7
Q ss_pred cChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHh
Q psy138 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIA 109 (321)
Q Consensus 30 ~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~ 109 (321)
+|.||||.|++.|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++++.. ++..+..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHc
Confidence 489999999999999999999998766 788899999999999999999999999999887 678889999999999999
Q ss_pred CCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q psy138 110 GNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAE 157 (321)
Q Consensus 110 ~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~ 157 (321)
|+.+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999875
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=6.7e-27 Score=168.30 Aligned_cols=117 Identities=27% Similarity=0.337 Sum_probs=110.3
Q ss_pred CCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCc
Q psy138 200 NVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCS 279 (321)
Q Consensus 200 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 279 (321)
|+++ .++..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCC
Confidence 4566 678899999999999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccceeec
Q psy138 280 ALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 280 ~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~ 318 (321)
|||+|+..++.+++++|+++|++++.+|..|.||+|++.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 999999999999999999999999999999999999854
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=2e-26 Score=163.30 Aligned_cols=126 Identities=43% Similarity=0.647 Sum_probs=120.3
Q ss_pred CCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCC
Q psy138 164 HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDG 243 (321)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g 243 (321)
+|.||++.|+. ..+.+++++|++.+.+++..+..|.||||.|+..++.+++++|+++|++++..+..|
T Consensus 1 ~g~t~L~~A~~------------~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 68 (126)
T 1n0r_A 1 NGRTPLHLAAR------------NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 68 (126)
T ss_dssp CCCCHHHHHHH------------HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCccHHHHHHH------------cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC
Confidence 47899999987 445899999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy138 244 LTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 244 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 302 (321)
.||||+|+..++.+++++|++ .|++++.+|..|.||+++|+..++.+++++|+++|||
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CcHHHHHHHcChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999 6999999999999999999999999999999999986
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=3.1e-26 Score=164.52 Aligned_cols=126 Identities=31% Similarity=0.401 Sum_probs=117.6
Q ss_pred CCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccC
Q psy138 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDK 241 (321)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 241 (321)
...+.||++.|+. ..+.+++++|++.|.+++..+..|.||||.|+..|+.+++++|+++|++++..|.
T Consensus 11 ~~~~~t~l~~A~~------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 78 (136)
T 2jab_A 11 GSDLGKKLLEAAR------------AGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA 78 (136)
T ss_dssp -CHHHHHHHHHHH------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cccccHHHHHHHH------------hCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC
Confidence 4557889999987 4558999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy138 242 DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300 (321)
Q Consensus 242 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 300 (321)
.|.||||+|+..++.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999 69999999999999999999999999999999987
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=5e-26 Score=160.49 Aligned_cols=111 Identities=30% Similarity=0.374 Sum_probs=105.3
Q ss_pred CCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHH
Q psy138 207 DKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVT 286 (321)
Q Consensus 207 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~ 286 (321)
+..+.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL-KGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999 699999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCccceeec
Q psy138 287 LGHADATTLLLQYGATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 287 ~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~~~~ 318 (321)
.++.+++++|+++|++++.+|..|.||+|++.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 99999999999999999999999999999864
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.6e-26 Score=164.47 Aligned_cols=134 Identities=23% Similarity=0.307 Sum_probs=118.7
Q ss_pred CCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCC
Q psy138 155 GAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA 234 (321)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 234 (321)
|+++ ..+..|.||+|.|+. ..+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASI------------KGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHH------------HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCC-CcCCCCCCHHHHHHH------------cCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4556 678889999999987 445899999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy138 235 NVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGAT 302 (321)
Q Consensus 235 ~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 302 (321)
+++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||+++|+..+..+++++|.+.+..
T Consensus 68 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 68 LVNTTGYQNDSPLHDAAKNGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CTTCCCGGGCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 999999999999999999999999999999 6999999999999999999999999999988887654
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=4.6e-25 Score=166.71 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=122.7
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccC-CCCCcHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAAD-EDGYTPLHLA 106 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~l~~A 106 (321)
..+|.||||.|++.|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|++++.+ ++..+ ..|.||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHH
Confidence 4579999999999999999999999 445889999999999999999999999999999988 45555 8899999999
Q ss_pred HHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccch
Q psy138 107 AIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186 (321)
Q Consensus 107 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (321)
+..|+.+++++|+++|++++..+..|.|||++|+..++. ..+.+++++++.
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~------------ 168 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRR------------ 168 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHH------------
T ss_pred HhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHH------------
Confidence 999999999999999999999999999999999875433 345788888886
Q ss_pred hhhHHHHHHHHHc
Q psy138 187 RVGLAVLKVLLHH 199 (321)
Q Consensus 187 ~~~~~~~~~l~~~ 199 (321)
....+++++|.++
T Consensus 169 ~~~~~i~~~L~~~ 181 (183)
T 3deo_A 169 IGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHh
Confidence 3446788888654
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=4.8e-25 Score=166.59 Aligned_cols=140 Identities=21% Similarity=0.258 Sum_probs=124.2
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCC-CCCCcHHHHHH
Q psy138 62 DRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQD-NEGHSVVHWAT 140 (321)
Q Consensus 62 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~t~l~~a~ 140 (321)
+..|.||||.|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5678999999999999999999999 655 68889999999999999999999999999999999888 88999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhc
Q psy138 141 VCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220 (321)
Q Consensus 141 ~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 220 (321)
..|+.+++++|+++|++++..+..|.||+++|+.... ...+.+++++|+..
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~-----------------------------~~~~~~~l~~a~~~ 169 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------------------TTPKGNPMQFGRRI 169 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH-----------------------------TCCCCSHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc-----------------------------CcccccHHHHHHHc
Confidence 9999999999999999999999999999999876311 13356788888888
Q ss_pred CCHHHHHHHHHc
Q psy138 221 GSSDAILALVKA 232 (321)
Q Consensus 221 ~~~~~~~~Ll~~ 232 (321)
|..+++++|.++
T Consensus 170 ~~~~i~~~L~~~ 181 (183)
T 3deo_A 170 GLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHTC
T ss_pred CHHHHHHHHHHh
Confidence 888888888754
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=5.1e-25 Score=155.27 Aligned_cols=116 Identities=25% Similarity=0.290 Sum_probs=98.0
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAI 108 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~ 108 (321)
..|.|+||.|+..|+.+++++|++.+.. ++.++..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHH
Confidence 3478999999999999999999987765 788888899999999999999999999988877 67788889999999999
Q ss_pred hCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHH
Q psy138 109 AGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVE 146 (321)
Q Consensus 109 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 146 (321)
.|+.+++++|+++|++++..+..|.||+++|...+..+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 99999999999999999988899999999885444333
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=6e-25 Score=173.66 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=85.7
Q ss_pred CCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCC-CCCCcHHHHHHhc
Q psy138 64 TRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQD-NEGHSVVHWATVC 142 (321)
Q Consensus 64 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~t~l~~a~~~ 142 (321)
.|.||||.|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 45556666666666666666655 433 45555556666666666666666666666666665555 4566666666666
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCC
Q psy138 143 GEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGS 222 (321)
Q Consensus 143 ~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 222 (321)
|+.+++++|+++|++++..+..|.||+++|+... ....+.|||++|+..|+
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-----------------------------~~~~~~~~l~~a~~~g~ 172 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREIL-----------------------------KTTPKGNPMQFGRRIGL 172 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-----------------------------TTCCCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----------------------------hccCCCCHHHHHHHcCh
Confidence 6666666666666666666666666666554321 11346688888888888
Q ss_pred HHHHHHHHHcCC
Q psy138 223 SDAILALVKAGA 234 (321)
Q Consensus 223 ~~~~~~Ll~~~~ 234 (321)
.+++++|++.+.
T Consensus 173 ~~iv~~L~~~~~ 184 (244)
T 3ui2_A 173 EKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHHHHE
T ss_pred HHHHHHHHHhcc
Confidence 888888887543
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=4.9e-25 Score=171.97 Aligned_cols=135 Identities=20% Similarity=0.206 Sum_probs=113.3
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHh-CCccccccCCCCCcHHHHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEV-APDLIEAADEDGYTPLHLA 106 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~l~~A 106 (321)
+..|.||||.|+..|+.+++++|++.+.. ++.+|..|.||||+|+..|+.+++++|++. +.+ ++..+..|.||||+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAA 147 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHH
Confidence 34688999999999999999999998765 888899999999999999999999999998 555 788999999999999
Q ss_pred HHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC
Q psy138 107 AIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIH 164 (321)
Q Consensus 107 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~ 164 (321)
+..|+.+++++|+++|++++..+..|.|||++|+..+..++++.|++.++.....+..
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 9999999999999999999999999999999999999999999999998887665443
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2.4e-24 Score=175.00 Aligned_cols=139 Identities=22% Similarity=0.232 Sum_probs=123.6
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccc------cccCCccHHHHHHHc---CcHHHHHHHHHhCCccccccCCCC
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRE------RDRTRKTVLHYCAEN---TILSCAETILEVAPDLIEAADEDG 99 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~ 99 (321)
..+.++|+.|+..|+.+.+++|++.+.+ ++. .+..|.||||+|+.. ++.+++++|++++++ ++..+..|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G 226 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADG 226 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCC
Confidence 3466889999999999999999988876 554 688999999999997 899999999999988 68889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhh
Q psy138 100 YTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQM 175 (321)
Q Consensus 100 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~ 175 (321)
.||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++|++ .|.||+|+|+..
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999876 578999999864
No 100
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=3.5e-24 Score=142.99 Aligned_cols=93 Identities=43% Similarity=0.653 Sum_probs=89.3
Q ss_pred CCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcC
Q psy138 209 DGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLG 288 (321)
Q Consensus 209 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~ 288 (321)
+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred CHHHHHHHHHcCCC
Q psy138 289 HADATTLLLQYGAT 302 (321)
Q Consensus 289 ~~~~~~~Ll~~ga~ 302 (321)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999985
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=2.6e-24 Score=170.02 Aligned_cols=142 Identities=21% Similarity=0.283 Sum_probs=125.7
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccC-CCCCcHHHHHH
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAAD-EDGYTPLHLAA 107 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~l~~A~ 107 (321)
.+|.||||.|++.|+.++++.|++ + .+++.+|..|.||||+|+..|+.+++++|++++.+ ++..+ ..|.||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHH
Confidence 469999999999999999999999 4 45889999999999999999999999999999988 45555 88999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchh
Q psy138 108 IAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVR 187 (321)
Q Consensus 108 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (321)
..|+.+++++|+++|++++..+..|.|||++|+..++ ...+.+|+++++. .
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~------------~ 170 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRR------------I 170 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHH------------H
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHH------------c
Confidence 9999999999999999999999999999999986332 2467899999987 4
Q ss_pred hhHHHHHHHHHcCCC
Q psy138 188 VGLAVLKVLLHHNVD 202 (321)
Q Consensus 188 ~~~~~~~~l~~~~~~ 202 (321)
...+++++|.+.+.+
T Consensus 171 g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 171 GLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHhccc
Confidence 557899999987543
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=4.1e-25 Score=172.39 Aligned_cols=137 Identities=26% Similarity=0.303 Sum_probs=112.7
Q ss_pred CCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHc-CCCccccc
Q psy138 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKA-GANVEAHD 240 (321)
Q Consensus 162 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~ 240 (321)
+..|.||||.|+. ....+++++|++.|.+++..+..|.||||+|+..|+.+++++|++. |++++..|
T Consensus 70 ~~~g~t~L~~A~~------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d 137 (222)
T 3ehr_A 70 AESIDNPLHEAAK------------RGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN 137 (222)
T ss_dssp EEEESCHHHHHHH------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC
T ss_pred ccccccccccccc------------cCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC
Confidence 5568899999987 4458999999999999999999999999999999999999999998 99999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Q psy138 241 KDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGR 311 (321)
Q Consensus 241 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 311 (321)
..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.++++.|++.|+....+|.+|+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999999 5999999999999999999999999999999999999988887764
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.5e-23 Score=168.55 Aligned_cols=130 Identities=20% Similarity=0.224 Sum_probs=112.0
Q ss_pred CcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccCCCCCc
Q psy138 133 HSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ 212 (321)
Q Consensus 133 ~t~l~~a~~~~~~~i~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t 212 (321)
.++|+.|+..++.+.++.+++.|.++.... .++..+..|.|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---------------------------------------~l~~~~~~g~t 171 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---------------------------------------PLANGHEPDET 171 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---------------------------------------CCSSCSSTTCB
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---------------------------------------cccccccCCCC
Confidence 456777777777777777777666543210 02334567899
Q ss_pred hhHHHHhc---CCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCC
Q psy138 213 PILWAASA---GSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGH 289 (321)
Q Consensus 213 ~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~ 289 (321)
|||+|+.. |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+
T Consensus 172 ~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~ 250 (278)
T 1dcq_A 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKH 250 (278)
T ss_dssp HHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCC
Confidence 99999999 89999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q psy138 290 ADATTLLLQYGAT 302 (321)
Q Consensus 290 ~~~~~~Ll~~ga~ 302 (321)
.+++++|+++|++
T Consensus 251 ~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 251 EHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999986
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=3.1e-24 Score=174.35 Aligned_cols=134 Identities=22% Similarity=0.152 Sum_probs=122.7
Q ss_pred CCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcc------cCCCCCchhHHHHhc---CCHHHHHHHHHcCCC
Q psy138 165 GGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNV------VDKDGRQPILWAASA---GSSDAILALVKAGAN 235 (321)
Q Consensus 165 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~ 235 (321)
..++++.|+. ...++.++.|+..|.+++. .+..|.||||+|+.. ++.+++++|+++|++
T Consensus 151 ~~~~L~~A~~------------~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad 218 (301)
T 2b0o_E 151 EPQRLWTAIC------------NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 218 (301)
T ss_dssp CHHHHHHHHH------------TTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC
T ss_pred hHHHHhhhhh------------ccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC
Confidence 4467888887 4457889999999999987 588999999999997 899999999999999
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCccce
Q psy138 236 VEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEY 315 (321)
Q Consensus 236 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l~ 315 (321)
++..|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++|++ .|.||||
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh 291 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLH 291 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhH
Confidence 99999999999999999999999999999 7999999999999999999999999999999999987 5899999
Q ss_pred ee
Q psy138 316 QW 317 (321)
Q Consensus 316 ~~ 317 (321)
++
T Consensus 292 ~A 293 (301)
T 2b0o_E 292 VD 293 (301)
T ss_dssp --
T ss_pred HH
Confidence 85
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.5e-24 Score=151.01 Aligned_cols=109 Identities=34% Similarity=0.452 Sum_probs=103.1
Q ss_pred ccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHH
Q psy138 205 VVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYA 284 (321)
Q Consensus 205 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A 284 (321)
..+..|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999 6999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCccc
Q psy138 285 VTLGHADATTLLLQYGATPNRQDRKGRTYE 314 (321)
Q Consensus 285 ~~~~~~~~~~~Ll~~ga~~~~~~~~g~t~l 314 (321)
+..++.+++++|+++|++++.++..|.+|-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999999999999884
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=2.8e-23 Score=172.44 Aligned_cols=144 Identities=31% Similarity=0.347 Sum_probs=116.8
Q ss_pred CCCchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCcccC--CCCCchhHHHHhcCCHHHHHHHHHcCCCcccccC
Q psy138 164 HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVD--KDGRQPILWAASAGSSDAILALVKAGANVEAHDK 241 (321)
Q Consensus 164 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 241 (321)
.+.++|+.|+... .++++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|.
T Consensus 198 ~~~t~L~~Aa~~~-----------g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~ 266 (368)
T 3jue_A 198 HPGALLFRASGHP-----------PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS 266 (368)
T ss_dssp CHHHHHHHHTSSS-----------CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcHHHHHHHcc-----------CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC
Confidence 4457888888641 45899999999999999988 8899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCccceeec
Q psy138 242 DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG---ATPNRQDRKGRTYEYQWR 318 (321)
Q Consensus 242 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g---a~~~~~~~~g~t~l~~~~ 318 (321)
.|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|++.| ++....+..+.|+++.++
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 99999999999999999999999 69999999999999999999999999999999886 455677788899998876
Q ss_pred c
Q psy138 319 S 319 (321)
Q Consensus 319 ~ 319 (321)
.
T Consensus 346 ~ 346 (368)
T 3jue_A 346 D 346 (368)
T ss_dssp -
T ss_pred H
Confidence 4
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.9e-23 Score=177.56 Aligned_cols=132 Identities=22% Similarity=0.178 Sum_probs=115.7
Q ss_pred CchhhhHhhhcccccccccchhhhHHHHHHHHHcCCCCccc------CCCCCchhHHHHh---cCCHHHHHHHHHcCCCc
Q psy138 166 GYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVV------DKDGRQPILWAAS---AGSSDAILALVKAGANV 236 (321)
Q Consensus 166 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~Ll~~~~~~ 236 (321)
...|+.|+. ..+.+.++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|+++
T Consensus 133 ~~~L~~A~~------------~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v 200 (497)
T 3lvq_E 133 PQRLWTAIC------------NRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL 200 (497)
T ss_dssp HHHHHHHHH------------HTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT
T ss_pred HHHHHHHHh------------ccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC
Confidence 356888876 55589999999999999877 7899999999966 89999999999999999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Q psy138 237 EAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310 (321)
Q Consensus 237 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ga~~~~~~~~g 310 (321)
+..|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++||+++.....+
T Consensus 201 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~ 273 (497)
T 3lvq_E 201 DAKAADGNTALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHV 273 (497)
T ss_dssp TCCCSSSCCHHHHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCccee
Confidence 9999999999999999999999999999 799999999999999999999999999999999999988754333
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.5e-22 Score=134.98 Aligned_cols=91 Identities=38% Similarity=0.611 Sum_probs=65.1
Q ss_pred CccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCC
Q psy138 65 RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE 144 (321)
Q Consensus 65 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 144 (321)
|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 56777777777777777777777666 56666677777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHcCC
Q psy138 145 VEALETVLSAGA 156 (321)
Q Consensus 145 ~~i~~~L~~~~~ 156 (321)
.+++++|+++|+
T Consensus 81 ~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 LEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 777777777665
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.2e-22 Score=161.64 Aligned_cols=128 Identities=16% Similarity=0.193 Sum_probs=118.3
Q ss_pred cChhHHHHHHHcCCHHHHHHHHHcCCCc-----ccccccCCccHHHHHHHc---CcHHHHHHHHHhCCccccccCCCCCc
Q psy138 30 EGATSLMYAAQQGKDAEVKAILASRPNA-----VRERDRTRKTVLHYCAEN---TILSCAETILEVAPDLIEAADEDGYT 101 (321)
Q Consensus 30 ~g~~~L~~A~~~g~~~~~~~ll~~~~~~-----~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t 101 (321)
...++|+.|+..|+.+.++.+++.+.+. ++..+..|.||||+|+.. |+.+++++|++++++ ++..|..|.|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCC
Confidence 3567999999999999999999988763 444578999999999999 999999999999988 6888999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q psy138 102 PLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEP 158 (321)
Q Consensus 102 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~ 158 (321)
|||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++.
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999998753
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1.9e-22 Score=175.45 Aligned_cols=129 Identities=22% Similarity=0.213 Sum_probs=116.9
Q ss_pred ChhHHHHHHHcCCHHHHHHHHHcCCCccccc------ccCCccHHHHHHH---cCcHHHHHHHHHhCCccccccCCCCCc
Q psy138 31 GATSLMYAAQQGKDAEVKAILASRPNAVRER------DRTRKTVLHYCAE---NTILSCAETILEVAPDLIEAADEDGYT 101 (321)
Q Consensus 31 g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~~~t 101 (321)
..+.||.|+..|+.+.++.||+.+.+ ++.. +..|.||||+|+. .|+.+++++|++++++ ++..|..|.|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCc
Confidence 45789999999999999999999865 5554 7899999999976 8999999999999988 7889999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC
Q psy138 102 PLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP 161 (321)
Q Consensus 102 ~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~~~~ 161 (321)
|||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998764
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=1.8e-22 Score=167.57 Aligned_cols=143 Identities=19% Similarity=0.217 Sum_probs=117.9
Q ss_pred ccChhHHHHHHHc-CCHHHHHHHHHcCCCcccccc--cCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHH
Q psy138 29 MEGATSLMYAAQQ-GKDAEVKAILASRPNAVRERD--RTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHL 105 (321)
Q Consensus 29 ~~g~~~L~~A~~~-g~~~~~~~ll~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 105 (321)
..+.++||.|+.. |+.++++.||+.+.+ ++..+ ..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~ 274 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHH 274 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 3467899999999 999999999998866 77777 8999999999999999999999999988 68889999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC---CCCCCCCCCchhhhHh
Q psy138 106 AAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAE---PSTPDIHGGYPIHYAS 173 (321)
Q Consensus 106 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~---~~~~~~~~~~~l~~~~ 173 (321)
|+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++|++.+.. ....+..+.+++..+.
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999987643 2233445566665544
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=2.3e-22 Score=139.87 Aligned_cols=107 Identities=29% Similarity=0.413 Sum_probs=70.3
Q ss_pred cccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHHH
Q psy138 61 RDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWAT 140 (321)
Q Consensus 61 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~ 140 (321)
+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.|||++|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 455666666666666666666666666655 4555666666666666666666666666666666666666666676666
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCch
Q psy138 141 VCGEVEALETVLSAGAEPSTPDIHGGYP 168 (321)
Q Consensus 141 ~~~~~~i~~~L~~~~~~~~~~~~~~~~~ 168 (321)
..++.+++++|+++|++++..+..+.+|
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 6666666666666666666665555554
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=5.9e-20 Score=126.32 Aligned_cols=92 Identities=37% Similarity=0.510 Sum_probs=85.7
Q ss_pred cccCCCCCchhHHHHhcCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhhcCCCcccCCCCCCcHHHH
Q psy138 204 NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFY 283 (321)
Q Consensus 204 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~ 283 (321)
...+.++.||||.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHcCCHHHHHHH
Q psy138 284 AVTLGHADATTLL 296 (321)
Q Consensus 284 A~~~~~~~~~~~L 296 (321)
|+..++.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.6e-19 Score=123.10 Aligned_cols=91 Identities=25% Similarity=0.317 Sum_probs=51.7
Q ss_pred ccccCCccHHHHHHHcCcHHHHHHHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccCCCCCCcHHHHH
Q psy138 60 ERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139 (321)
Q Consensus 60 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a 139 (321)
..+.+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 3444555566666665666666665555544 344555556666666666666666666666666655555666666666
Q ss_pred HhcCCHHHHHHH
Q psy138 140 TVCGEVEALETV 151 (321)
Q Consensus 140 ~~~~~~~i~~~L 151 (321)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 666666655544
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=55.88 E-value=8.5 Score=31.37 Aligned_cols=258 Identities=15% Similarity=0.091 Sum_probs=135.5
Q ss_pred cccChhHHHHHHHcCCHHHHHHHHHcCCCc--ccccccCCccHHHHHHHcCcHHHHHHHHHhCC--ccccccCCCCCcHH
Q psy138 28 TMEGATSLMYAAQQGKDAEVKAILASRPNA--VRERDRTRKTVLHYCAENTILSCAETILEVAP--DLIEAADEDGYTPL 103 (321)
Q Consensus 28 ~~~g~~~L~~A~~~g~~~~~~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~t~l 103 (321)
+..|.-.|......++.+..+.++++-... .-..|.+|+..+.-....+..+....+++.-. ...-..+..|.-.+
T Consensus 34 dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvv 113 (351)
T 3gvo_A 34 DQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVI 113 (351)
T ss_dssp SHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHH
T ss_pred CCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHH
Confidence 455777777778888776666665443222 22467888888888888888887777776422 11224466676777
Q ss_pred HHHHHhCCHHHHHHHHHc-CCCC--ccCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC---CCCCCCCCchhhhHhhhcc
Q psy138 104 HLAAIAGNVPLIHTLLAH-RANV--NSQDNEGHSVVHWATVCGEVEALETVLSAGAEP---STPDIHGGYPIHYASQMCG 177 (321)
Q Consensus 104 ~~A~~~~~~~~v~~Ll~~-~~~~--~~~~~~~~t~l~~a~~~~~~~i~~~L~~~~~~~---~~~~~~~~~~l~~~~~~~~ 177 (321)
..+......+-...+++. ...+ -..|..|...+..++..+..+..+.+++.-..- -.....|...+..+...+.
T Consensus 114 Qk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~ 193 (351)
T 3gvo_A 114 QKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCT 193 (351)
T ss_dssp HHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSC
T ss_pred HHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCC
Confidence 777777766655555542 1110 123556666666666655554444444421100 0011122222222111111
Q ss_pred cccccccchhhhHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHHHcCC-Cc--ccccCCCCcHHHHHHHcC
Q psy138 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA-NV--EAHDKDGLTALHCAASRG 254 (321)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~--~~~~~~g~t~l~~a~~~~ 254 (321)
......+++-+.. ....-..|..|+-.+......+..+..+.+++.=. .+ -..++.|...+..+...+
T Consensus 194 --------~~~~~~ii~~l~~-~~~~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~ 264 (351)
T 3gvo_A 194 --------AEQTLPILEELHQ-HTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHA 264 (351)
T ss_dssp --------HHHHHHHHHHHHT-THHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHS
T ss_pred --------HHHHHHHHHHHhh-hHHhcCCCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhC
Confidence 0111223333322 11122456778788888888888777666665311 11 123566666777777776
Q ss_pred CHHHHHHHHhhc-C--------CCcccCCCCCCcHHHHHHHcCCHHHHH
Q psy138 255 HRECLETLITLC-G--------ADVDVIDTNGCSALFYAVTLGHADATT 294 (321)
Q Consensus 255 ~~~~~~~Ll~~~-~--------~~~~~~~~~g~t~l~~A~~~~~~~~~~ 294 (321)
..+.-+.+++.. + ...-..|..|+..+..+...+..+--+
T Consensus 265 ~~~~r~~ii~el~~~~~~~~~~l~~l~~d~ygnyViq~~L~~~~~~~r~ 313 (351)
T 3gvo_A 265 SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRK 313 (351)
T ss_dssp CHHHHHHHHHHHHSCEETTEEHHHHHHHSTTHHHHHHHHHHHCCHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCChHHHHccCCcchHHHHHHHHHhCCHHHHH
Confidence 665433333321 0 001134667777777776666554333
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=51.98 E-value=64 Score=23.23 Aligned_cols=113 Identities=12% Similarity=-0.010 Sum_probs=66.9
Q ss_pred ccChhHHHHHHHcCCHHHHHHHHHcCCCcccccccCCccHHHHHHHcCcHHHHHHHHHhCCcccc---------------
Q psy138 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIE--------------- 93 (321)
Q Consensus 29 ~~g~~~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--------------- 93 (321)
.+..+-+..|...|+++....+.+.... .....+.=..|...|++++++....+..+.-.
T Consensus 6 ~D~~~rF~LAL~lg~l~~A~e~a~~l~~-----~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 6 QDPHIRFDLALEYGNLDAALDEAKKLND-----SITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHCC-----HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH
T ss_pred CChHHHHHHHHhcCCHHHHHHHHHHhCC-----HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHH
Confidence 4456778999999999988777654321 11233455566677888888887776654310
Q ss_pred ------ccCCCCCcHHHHHHHhCCHH-HHHHHHHcCCCCccCCCCCCcHHHHHHhcCCHHHHHHHHHc
Q psy138 94 ------AADEDGYTPLHLAAIAGNVP-LIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSA 154 (321)
Q Consensus 94 ------~~~~~~~t~l~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~L~~~ 154 (321)
....+-...++.+...|+++ .++.|.+.|.-+ -+...|-.+|..++.+.+++.
T Consensus 81 kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 81 KMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHHH
Confidence 01122234555666666644 455555432211 234566668888888877753
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=50.05 E-value=46 Score=27.56 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=34.9
Q ss_pred HHHHHcCCHHHHHHHHHcCCCccccc-------------ccCCccHHHHHHHcCcHHHHHHHHH
Q psy138 36 MYAAQQGKDAEVKAILASRPNAVRER-------------DRTRKTVLHYCAENTILSCAETILE 86 (321)
Q Consensus 36 ~~A~~~g~~~~~~~ll~~~~~~~~~~-------------~~~g~t~L~~A~~~~~~~~v~~Ll~ 86 (321)
...+..|+...|+..+..|++.-..- -..|.|.+|+|++..+.+++..|+.
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 44567899999999999987631110 1356677777777777777777765
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=47.11 E-value=28 Score=29.95 Aligned_cols=40 Identities=8% Similarity=0.043 Sum_probs=21.1
Q ss_pred hHHHHHHHHHcCCCCcccCCCCCchhHHHHhcCCHHHHHHHH
Q psy138 189 GLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALV 230 (321)
Q Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 230 (321)
..++++.+.+.|..++..... +.+...++.|..+-+..++
T Consensus 159 A~~l~~~M~~~G~~Pd~~ty~--~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 159 AYEVDAHMVESEVVPEEPELA--ALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHHHHHTTCCCCHHHHH--HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHH--HHHHHHhhCCCHHHHHHHH
Confidence 345566666666666543221 3445555666665544443
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=44.75 E-value=19 Score=18.21 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=11.2
Q ss_pred HHHHHHcCCHHHHHHH
Q psy138 35 LMYAAQQGKDAEVKAI 50 (321)
Q Consensus 35 L~~A~~~g~~~~~~~l 50 (321)
+..||..|+++.++.|
T Consensus 17 iyvA~seGd~etv~~L 32 (40)
T 1gp8_A 17 MDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHTTSCHHHHHHH
T ss_pred HHHHHhcCCHHHHHHH
Confidence 5667777777776655
No 120
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=36.36 E-value=44 Score=28.75 Aligned_cols=118 Identities=10% Similarity=0.055 Sum_probs=61.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHc----CCCcccccccCCccHHHHHHHc-C-------------cHHHHHHHHHhCCccccc
Q psy138 33 TSLMYAAQQGKDAEVKAILAS----RPNAVRERDRTRKTVLHYCAEN-T-------------ILSCAETILEVAPDLIEA 94 (321)
Q Consensus 33 ~~L~~A~~~g~~~~~~~ll~~----~~~~~~~~~~~g~t~L~~A~~~-~-------------~~~~v~~Ll~~~~~~~~~ 94 (321)
..|...++.|+.+-...+++. +-. ++ ....+.|..|+.. + -.++.+.+.+.+..+ +.
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~-pd---~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-d~ 105 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQ-LS---QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-NE 105 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCC-CC---HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-CH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCC-CC---HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-CH
Confidence 457778899998766666543 321 11 1223444444432 2 134555555554331 11
Q ss_pred cCCCCCcHHHHHHHhCCHHHHHHHH----HcCCCCccCCCCCCcHHHHHHhcCCHHHHHH----HHHcCCCCC
Q psy138 95 ADEDGYTPLHLAAIAGNVPLIHTLL----AHRANVNSQDNEGHSVVHWATVCGEVEALET----VLSAGAEPS 159 (321)
Q Consensus 95 ~~~~~~t~l~~A~~~~~~~~v~~Ll----~~~~~~~~~~~~~~t~l~~a~~~~~~~i~~~----L~~~~~~~~ 159 (321)
. .-.+.+...+..|+.+-+..++ +.|..++... -.+.+...+..|..+-+.. +.+.|..++
T Consensus 106 ~--tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 106 A--TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp H--HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC
T ss_pred H--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC
Confidence 1 1123456667788876555444 4566655432 2245666777888765444 445566554
No 121
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.88 E-value=2.1e+02 Score=23.81 Aligned_cols=19 Identities=16% Similarity=0.108 Sum_probs=13.9
Q ss_pred HHcCcHHHHHHHHHhCCcc
Q psy138 73 AENTILSCAETILEVAPDL 91 (321)
Q Consensus 73 ~~~~~~~~v~~Ll~~~~~~ 91 (321)
+..|+...|+-.+..+++.
T Consensus 30 v~e~~~~~ve~y~~~gg~~ 48 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDI 48 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCT
T ss_pred HHcCChhHHHHHHhcCCch
Confidence 4568888888888877763
Done!