RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy138
(321 letters)
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can
range from 2 to over 20 (ankyrins, for example). ANK
repeats may occur in combinations with other types of
domains. The structural repeat unit contains two
antiparallel helices and a beta-hairpin, repeats are
stacked in a superhelical arrangement; this alignment
contains 4 consecutive repeats.
Length = 126
Score = 105 bits (264), Expect = 3e-28
Identities = 61/170 (35%), Positives = 84/170 (49%), Gaps = 45/170 (26%)
Query: 94 AADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLS 153
A DEDG TPLHLAA G++ ++ LL + A+VN++DN+G +
Sbjct: 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRT------------------- 42
Query: 154 AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQP 213
P+H A+ GH L ++K+LL DVN DKDG P
Sbjct: 43 --------------PLHLAA-KNGH-----------LEIVKLLLEKGADVNARDKDGNTP 76
Query: 214 ILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
+ AA G+ D + L+K GA+V A DKDG T LH AA GH E ++ L+
Sbjct: 77 LHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126
Score = 105 bits (263), Expect = 4e-28
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 204 NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
N D+DGR P+ AAS G + + L++ GA+V A D DG T LH AA GH E ++ L+
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 264 TLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
GADV+ D +G + L A G+ D LLL++GA N +D+ GRT
Sbjct: 61 E-KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRT 108
Score = 99.8 bits (249), Expect = 5e-26
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG 221
D G P+H A+ GH L V+K+LL + DVN D DGR P+ AA G
Sbjct: 4 DEDGRTPLHLAASN-GH-----------LEVVKLLLENGADVNAKDNDGRTPLHLAAKNG 51
Query: 222 SSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSAL 281
+ + L++ GA+V A DKDG T LH AA G+ + ++ L+ GADV+ D +G + L
Sbjct: 52 HLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLL-KHGADVNARDKDGRTPL 110
Query: 282 FYAVTLGHADATTLLL 297
A GH + LLL
Sbjct: 111 HLAAKNGHLEVVKLLL 126
Score = 90.5 bits (225), Expect = 2e-22
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 60 ERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLL 119
RD +T LH A N L + +LE D + A D DG TPLHLAA G++ ++ LL
Sbjct: 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 120 AHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQ 174
A+VN++D +G++ +H A G ++ ++ +L GA+ + D G P+H A++
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115
Score = 86.7 bits (215), Expect = 5e-21
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
+G T L AA G VK +L + + V +D +T LH A+N L + +LE
Sbjct: 6 DGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA 64
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
D + A D+DG TPLHLAA GN+ ++ LL H A+VN++D +G + +H A G +E ++
Sbjct: 65 D-VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVK 123
Query: 150 TVL 152
+L
Sbjct: 124 LLL 126
Score = 33.9 bits (78), Expect = 0.034
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETIL 85
+G T L AA+ G VK +L + V RD+ +T LH A+N L + +L
Sbjct: 68 ARDKDGNTPLHLAARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLLL 126
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies).
Length = 91
Score = 81.5 bits (202), Expect = 1e-19
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 214 ILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVI 273
+ AA G+ + + L++ GA+V D D TALH AA G+ E ++ L+ GADV+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLE-HGADVNAK 57
Query: 274 DTNGCSALFYAVTLGHADATTLLLQYGATPNRQD 307
D +G +AL A G+ + LLL++GA N +D
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 71.9 bits (177), Expect = 5e-16
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVE 237
A++ GN L ++K+LL DVN+ D D + AA G+ + + L++ GA+V
Sbjct: 3 LAAKNGN-----LELVKLLLEKGADVNLGDTDT--ALHLAARNGNLEIVKLLLEHGADVN 55
Query: 238 AHDKDGLTALHCAASRGHRECLETLITLCGADVDVID 274
A DKDG TALH AA G+ E ++ L+ GAD+++ D
Sbjct: 56 AKDKDGNTALHLAARNGNLEIVKLLLEH-GADINLKD 91
Score = 62.7 bits (153), Expect = 1e-12
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 103 LHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPD 162
LHLAA GN+ L+ LL A+VN D + +H A G +E ++ +L GA+ + D
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58
Query: 163 IHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVD 207
G +H A++ G+ L ++K+LL H D+N+ D
Sbjct: 59 KDGNTALHLAARN-GN-----------LEIVKLLLEHGADINLKD 91
Score = 62.3 bits (152), Expect = 1e-12
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 69 LHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQ 128
LH A+N L + +LE D+ D T LHLAA GN+ ++ LL H A+VN++
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADV---NLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 129 DNEGHSVVHWATVCGEVEALETVLSAGAEPSTPD 162
D +G++ +H A G +E ++ +L GA+ + D
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 60.7 bits (148), Expect = 5e-12
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 35 LMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEA 94
L AA+ G VK +L + T LH A N L + +LE D + A
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADV---NLGDTDTALHLAARNGNLEIVKLLLEHGAD-VNA 56
Query: 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQD 129
D+DG T LHLAA GN+ ++ LL H A++N +D
Sbjct: 57 KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 56.5 bits (137), Expect = 2e-10
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 247 LHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQ 306
LH AA G+ E ++ L+ GADV++ DT+ +AL A G+ + LLL++GA N +
Sbjct: 1 LHLAAKNGNLELVKLLLE-KGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 307 DRKGRT 312
D+ G T
Sbjct: 58 DKDGNT 63
Score = 34.5 bits (80), Expect = 0.009
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 27 NTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILE 86
N + T+L AA+ G VK +L + V +D+ T LH A N L + +LE
Sbjct: 24 NLGDTDTALHLAARNGNLEIVKLLLEHGAD-VNAKDKDGNTALHLAARNGNLEIVKLLLE 82
Query: 87 VAPDL 91
D+
Sbjct: 83 HGADI 87
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional.
Length = 471
Score = 77.0 bits (190), Expect = 1e-15
Identities = 58/279 (20%), Positives = 101/279 (36%), Gaps = 27/279 (9%)
Query: 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCA--ENTILSCAETILEVA 88
G T L +V +L V +D+ +T LH N +L
Sbjct: 83 GFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG 142
Query: 89 PDLIEAADEDGYTPLHLAAIAGNVP--LIHTLLAHRANVNSQDNEGHSVVH-WATVCGEV 145
D + A D G TPL + + N L+ L+ A+V + D+ S++H
Sbjct: 143 AD-VNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPR 201
Query: 146 EA-LETVLSAGAEPSTPDIHGGYPIHYASQMCG-HASEMGNDVRVGLAVLKVLLHHNVDV 203
+ ++ AG +P+ D+ G P+H + S + LL + +
Sbjct: 202 ARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLP-----------LLIAGISI 250
Query: 204 NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
N ++ G+ P+ +AA + A L+ GA++ A DG T L + + +
Sbjct: 251 NARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAAL 310
Query: 264 TLCGADVDVIDTNGCSALFYAVTLGHA---DATTLLLQY 299
+ + + L A G DAT L +
Sbjct: 311 AKN-PSAETVA----ATLNTASVAGGDIPSDATRLCVAK 344
Score = 72.0 bits (177), Expect = 5e-14
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 25/278 (8%)
Query: 46 EVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETI---LEVAPDLIEAADEDGYTP 102
EV+ +LA+ + V R KT LH + + + LE D + A + G+TP
Sbjct: 29 EVRRLLAAGAD-VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTP 86
Query: 103 LHLAAIAGNV-PLIHTLLAHRANVNSQDNEGHSV--VHWATVCGEVEALETVLSAGAEPS 159
LHL +I L+ A+VN++D G + V+ + + + +L GA+ +
Sbjct: 87 LHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN 146
Query: 160 TPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPI-LWAA 218
D++G P+ + + + +L++L+ DV VD R +
Sbjct: 147 ALDLYGMTPLA---------VLLKS-RNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQ 196
Query: 219 SAGSSDAIL-ALVKAGANVEAHDKDGLTALHCAASRGHRECLETLIT---LCGADVDVID 274
S I+ L++AG + A D G T LH A+ C +L+ + G ++ +
Sbjct: 197 SFKPRARIVRELIRAGCDPAATDMLGNTPLHSMAT--GSSCKRSLVLPLLIAGISINARN 254
Query: 275 TNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
G + L YA + A L+ GA N G T
Sbjct: 255 RYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNT 292
Score = 49.3 bits (118), Expect = 1e-06
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 181 EMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPI---LWAASAGSSDAILALVKAGANVE 237
++V V ++ LL DVN + G+ P+ L +S D + L++AGA+V
Sbjct: 20 LNASNVTVE--EVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN 77
Query: 238 AHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSAL-FYAVTLG-HADATTL 295
A ++ G T LH + L+ GADV+ D G + L Y + L
Sbjct: 78 APERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRL 137
Query: 296 LLQYGATPNRQDRKGRT 312
LL+ GA N D G T
Sbjct: 138 LLRKGADVNALDLYGMT 154
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction
only].
Length = 235
Score = 71.8 bits (175), Expect = 1e-14
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 70 HYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQD 129
+ C + +L +L + + Y L L A L+ L+ ++ ++D
Sbjct: 12 NKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIV-DRHLAARD 70
Query: 130 NEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVG 189
+G +H A G+ + ++ +L++GA+ + D G P+H A+ + G+ E +V
Sbjct: 71 LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAA-LNGNPPEGNIEV--- 126
Query: 190 LAVLKVLLHHNV---DVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTA 246
K+LL N+ D+DG P+ WAA G +D + L++AGA+ + + G+TA
Sbjct: 127 ---AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTA 183
Query: 247 LHCAASRGHRECLETLITL 265
L AA G E ++ L+
Sbjct: 184 LDPAAKNGRIELVKLLLDK 202
Score = 63.3 bits (153), Expect = 1e-11
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 84 ILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG 143
+ + + A D DG PLH AA G+ ++ LLA A+VN++D +G + +H A + G
Sbjct: 58 LKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNG 117
Query: 144 E-----VEALETVLSAGAEPSTP---DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKV 195
+E + +L AGA+ D G P+H+A+ + G A ++++
Sbjct: 118 NPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAA-LNGDA-----------DIVEL 165
Query: 196 LLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKD 242
LL D N + G + AA G + + L+ G ++ +
Sbjct: 166 LLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFN 212
Score = 62.9 bits (152), Expect = 2e-11
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAEN-----TILSC 80
++G L AA +G D VK +LAS + V +D T LH A N +
Sbjct: 68 ARDLDGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEV 126
Query: 81 AETILEVAP--DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHW 138
A+ +LE D+ DEDG TPLH AA+ G+ ++ LL A+ NS+++ G + +
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186
Query: 139 AT 140
A
Sbjct: 187 AA 188
Score = 62.5 bits (151), Expect = 2e-11
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 173 SQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKA 232
+ + + L + ++ H D DGR P+ AAS G + L+ +
Sbjct: 39 LNLYLELALLPAASLSELLLKLIVDRHL---AARDLDGRLPLHSAASKGDDKIVKLLLAS 95
Query: 233 GANVEAHDKDGLTALHCAASRGH-----RECLETLI--TLCGADVDVIDTNGCSALFYAV 285
GA+V A D DG T LH AA G+ E + L+ ++ D +G + L +A
Sbjct: 96 GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAA 155
Query: 286 TLGHADATTLLLQYGATPNRQDRKGRT 312
G AD LLL+ GA PN ++ G T
Sbjct: 156 LNGDADIVELLLEAGADPNSRNSYGVT 182
Score = 29.4 bits (65), Expect = 1.9
Identities = 18/113 (15%), Positives = 31/113 (27%), Gaps = 35/113 (30%)
Query: 18 NGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTI 77
D +G T L +AA G V+ +L + +
Sbjct: 134 GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGAD--------------------- 172
Query: 78 LSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDN 130
+ + G T L AA G + L+ LL +++
Sbjct: 173 --------------PNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKF 211
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional.
Length = 422
Score = 72.4 bits (178), Expect = 3e-14
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 42/254 (16%)
Query: 33 TSLMYAAQQGKDAE-VKAILASRPNAVRERDRTRKTVLHYCA-----ENTILSCAETILE 86
+Y A++ ++ + VK +L + + + + T LHY + + + +LE
Sbjct: 36 VLPLYLAKEARNIDVVKILLDNGAD-INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLE 94
Query: 87 VAPDLIEAADEDGYTPLHLAAIA--GNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG- 143
+ + A D +G TPL A + ++ LL + ANVN ++++G +++H
Sbjct: 95 YGAN-VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNK 153
Query: 144 -EVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVD 202
+++ L+ ++ G D+ + LL + V
Sbjct: 154 IDLKILKLLIDKGV----------------------------DINA-KNRVNYLLSYGVP 184
Query: 203 VNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETL 262
+N+ D G P+ +A + + + L+ GAN +K G T LH A + + + L
Sbjct: 185 INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAI-LNNNKEIFKL 243
Query: 263 ITLCGADVDVIDTN 276
+ G + I
Sbjct: 244 LLNNGPSIKTIIET 257
Score = 72.4 bits (178), Expect = 3e-14
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 49/261 (18%)
Query: 60 ERDRT-RKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTL 118
+ R + + Y DL + + + PL+LA A N+ ++ L
Sbjct: 8 TKSRIIKVKNIKYIIME-------------DDLNDYSYKKPVLPLYLAKEARNIDVVKIL 54
Query: 119 LAHRANVNSQDNE----GHSVVHWATVCGEV-EALETVLSAGAEPSTPDIHGGYPIHYAS 173
L + A++NS H + + +V E ++ +L GA + PD +G P+ YA
Sbjct: 55 LDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAI 114
Query: 174 QMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSD-AILA-LVK 231
++ + ++ LL + +VN+ + DG + + D IL L+
Sbjct: 115 SKKSNSYSI----------VEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLID 164
Query: 232 AGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHAD 291
G ++ A ++ + L++ G +++ D G + L YAV + +
Sbjct: 165 KGVDINAKNR-----------------VNYLLSY-GVPINIKDVYGFTPLHYAVYNNNPE 206
Query: 292 ATTLLLQYGATPNRQDRKGRT 312
LL GA PN ++ G T
Sbjct: 207 FVKYLLDLGANPNLVNKYGDT 227
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional.
Length = 434
Score = 65.4 bits (159), Expect = 7e-12
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 38/258 (14%)
Query: 78 LSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNE------ 131
+ E I++ + I + ++ TPL A +G+ ++ + H A++N + +
Sbjct: 14 IEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLL 73
Query: 132 ------GHSVVHWATV-----------CGEVEALETVLSAGAEPSTPDIHGGYPIHYASQ 174
H ++ C E + ++T+L G + + D +HYA +
Sbjct: 74 TAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIK 133
Query: 175 MCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA 234
D L +K+L + DVN+ D +G PI A D I L++ GA
Sbjct: 134 --------KGD----LESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGA 181
Query: 235 NVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATT 294
D +G + LH AA G C++ LI G + NG + L A+ H +
Sbjct: 182 YANVKDNNGESPLHNAAEYGDYACIKLLID-HGNHIMNKCKNGFTPLHNAII--HNRSAI 238
Query: 295 LLLQYGATPNRQDRKGRT 312
LL A+ N QD G T
Sbjct: 239 ELLINNASINDQDIDGST 256
Score = 65.0 bits (158), Expect = 9e-12
Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 46/220 (20%)
Query: 47 VKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLA 106
+K IL + V +D KT LHY + L + + E D + D++G P+H+A
Sbjct: 107 IKTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIA 164
Query: 107 AIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPS------- 159
+I LL A N +DN G S +H A G+ ++ ++ G
Sbjct: 165 IKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGF 224
Query: 160 TP------------------------DIHGGYPIHYASQM-CGHASEMGNDVRVGLAVLK 194
TP DI G P+H+A C + ++
Sbjct: 225 TPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPC------------DIDIID 272
Query: 195 VLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGA 234
+LL+H D+++ D G PI A + D ++ + A A
Sbjct: 273 ILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANA 312
Score = 59.6 bits (144), Expect = 6e-10
Identities = 61/241 (25%), Positives = 95/241 (39%), Gaps = 53/241 (21%)
Query: 72 CAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNE 131
C E ++ +TIL+ D + D + T LH A G++ I L + A+VN +
Sbjct: 101 CIEKDMI---KTILDCGID-VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE--- 153
Query: 132 GHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLA 191
D +G YPIH A + H
Sbjct: 154 ------------------------------DDNGCYPIHIAIK---HNF---------FD 171
Query: 192 VLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAA 251
++K+LL NV D +G P+ AA G I L+ G ++ K+G T LH A
Sbjct: 172 IIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231
Query: 252 SRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLG-HADATTLLLQYGATPNRQDRKG 310
+R +E LI A ++ D +G + L +A+ D +LL + A + +D KG
Sbjct: 232 IH-NRSAIELLIN--NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKG 288
Query: 311 R 311
Sbjct: 289 E 289
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional.
Length = 413
Score = 64.2 bits (156), Expect = 2e-11
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 98 DGYTPLHLAAIAGNVPLIHTLLAHRA--NVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155
DG +P+ LA + I L+ H A +V D E S +H A G+V+A+E +L G
Sbjct: 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIE--SELHDAVEEGDVKAVEELLDLG 91
Query: 156 AEPSTPDI---HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ 212
D+ G P+H A+ + L ++K+L+ D ++ + D
Sbjct: 92 KFAD--DVFYKDGMTPLHLATIL------------KKLDIMKLLIARGADPDIPNTDKFS 137
Query: 213 PILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDV 272
P+ A G I L+ A ++ D G T L A ++G + L+ GA++D
Sbjct: 138 PLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLD-SGANIDY 196
Query: 273 IDTNGC-SALFYAVTLGHADATTLLLQYGATPN 304
NGC +AL YA+ D L ++ GA N
Sbjct: 197 FGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229
Score = 63.5 bits (154), Expect = 3e-11
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQ-DNEGHSVVHWATVCGEVEALETVLSAGAEPS 159
+ LH A G+V + LL + +G + +H AT+ +++ ++ +++ GA+P
Sbjct: 70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD 129
Query: 160 TPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS 219
P+ P+H A M D++ +++L+ H +++ D G P++ A +
Sbjct: 130 IPNTDKFSPLHLAV--------MMGDIKG----IELLIDHKACLDIEDCCGCTPLIIAMA 177
Query: 220 AGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDT 275
G L+ +GAN++ K+G A C A ++ + L GAD +++
Sbjct: 178 KGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFM 233
Score = 59.6 bits (144), Expect = 6e-10
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 106 AAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEP--STPDI 163
A + G + + LL N N + +G S + A + EA++ ++ GA P PDI
Sbjct: 9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68
Query: 164 HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVN-VVDKDGRQPILWAASAGS 222
+H A E G+ V + LL + V KDG P+ A
Sbjct: 69 ES--ELH-------DAVEEGDVKAV-----EELLDLGKFADDVFYKDGMTPLHLATILKK 114
Query: 223 SDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALF 282
D + L+ GA+ + + D + LH A G + +E LI A +D+ D GC+ L
Sbjct: 115 LDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGCTPLI 173
Query: 283 YAVTLGHADATTLLLQYGATPNRQDRKG 310
A+ G +LL GA + + G
Sbjct: 174 IAMAKGDIAICKMLLDSGANIDYFGKNG 201
Score = 53.1 bits (127), Expect = 7e-08
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 139 ATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLH 198
A + GE++ +L G P+ G PI A + SE +K+L+
Sbjct: 9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKF--RDSEA----------IKLLMK 56
Query: 199 HNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANV-EAHDKDGLTALHCAASRGHRE 257
H +V D + A G A+ L+ G + KDG+T LH A +
Sbjct: 57 HGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLD 116
Query: 258 CLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
++ LI GAD D+ +T+ S L AV +G LL+ + A + +D G T
Sbjct: 117 IMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCT 170
Score = 45.8 bits (108), Expect = 2e-05
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 178 HASEMGNDVRVG-LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANV 236
+ + + G L + + LL ++ N DG PI A S+AI L+K GA
Sbjct: 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP 61
Query: 237 EAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLL 296
+ D + LH A G + +E L+ L DV +G + L A L D LL
Sbjct: 62 DVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLL 121
Query: 297 LQYGATPN 304
+ GA P+
Sbjct: 122 IARGADPD 129
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
Length = 682
Score = 64.3 bits (156), Expect = 2e-11
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 24/196 (12%)
Query: 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCA-----ENTILSCAET 83
++G T L A+ G D E L V DR T LH + ++ ++ T
Sbjct: 305 IKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVI----T 360
Query: 84 ILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCG 143
+LE+ + + A D TP+H AA+ NV +I+TLL + A++ + + + +H+A +CG
Sbjct: 361 LLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFA-LCG 418
Query: 144 E--VEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNV 201
+++T++ GA ++ + P+HYA + + + L V+++LL +
Sbjct: 419 TNPYMSVKTLIDRGANVNSKNKDLSTPLHYACK---------KNCK--LDVIEMLLDNGA 467
Query: 202 DVNVVDKDGRQPILWA 217
DVN ++ + P+L A
Sbjct: 468 DVNAINIQNQYPLLIA 483
Score = 64.3 bits (156), Expect = 2e-11
Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 46/256 (17%)
Query: 78 LSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVH 137
L AE +LE D + A D TP+H AA GN +++ LL++ A+VN + SV+
Sbjct: 158 LLIAEMLLEGGAD-VNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLE 216
Query: 138 WATVCGEV--------------------------EALETVL---SAGAEPSTPDIHGGYP 168
A + E LET L AG ++ D P
Sbjct: 217 CAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTP 276
Query: 169 IHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG-SSDAIL 227
+H+ASQ + ++ LL DVN + G P+ A G ++ I
Sbjct: 277 LHHASQAPSLSR-----------LVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIR 325
Query: 228 ALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITL--CGADVDVIDTNGCSALFYAV 285
L+ GA+V A D+ +T LH A++ + + +ITL GA+V+ D + + YA
Sbjct: 326 TLIMLGADVNAADRLYITPLHQASTLDRNK--DIVITLLELGANVNARDYCDKTPIHYAA 383
Query: 286 TLGHADATTLLLQYGA 301
+ LL YGA
Sbjct: 384 VRNNVVIINTLLDYGA 399
Score = 54.3 bits (130), Expect = 4e-08
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 28 TMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEV 87
++ + L A +KAI+ +R N + K + + E ++L L
Sbjct: 208 ALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLL------LYD 261
Query: 88 APDLIEAADEDGYTPLHLAAIAGNVP-LIHTLLAHRANVNSQDNEGHSVVHWATVCG-EV 145
A + + D+ TPLH A+ A ++ L+ LL A+VN+++ +G + ++ G +
Sbjct: 262 AGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDT 321
Query: 146 EALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNV 205
E + T++ GA+ + D P+H AS + + D+ + LL +VN
Sbjct: 322 ENIRTLIMLGADVNAADRLYITPLHQASTL-----DRNKDIVI------TLLELGANVNA 370
Query: 206 VDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA-ASRGHRECLETLIT 264
D + PI +AA + I L+ GA++EA + TALH A ++TLI
Sbjct: 371 RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLID 430
Query: 265 LCGADVDVIDTNGCSALFYAVTLG-HADATTLLLQYGATPN 304
GA+V+ + + + L YA D +LL GA N
Sbjct: 431 R-GANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVN 470
Score = 52.4 bits (125), Expect = 2e-07
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 144 EVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDV 203
E+ E +L GA+ + DI+ PIHYA+ E GN V L LL + DV
Sbjct: 157 ELLIAEMLLEGGADVNAKDIYCITPIHYAA-------ERGNAKMVNL-----LLSYGADV 204
Query: 204 NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
N++ D + A + + D I A++ +N+ +D L A+ E LET +
Sbjct: 205 NIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAI-------RNEDLETSL 257
Query: 264 TL--CGADVDVIDTNGCSALFYAV-TLGHADATTLLLQYGATPNRQDRKGRTYEY 315
L G V+ ID + L +A + LL+ GA N ++ KG T Y
Sbjct: 258 LLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLY 312
Score = 49.3 bits (117), Expect = 2e-06
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 118 LLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYA----- 172
LL A+VN++D + +H+A G + + +LS GA+ + + + A
Sbjct: 164 LLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKN 223
Query: 173 -SQMCGHASEMGNDVRVGLAVLKVLLHHNVD-----------VNVVDKDGRQPILWAASA 220
+ N + L++LK + + +++ VN +D P+ A+ A
Sbjct: 224 IDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQA 283
Query: 221 GS-SDAILALVKAGANVEAHDKDGLTALHCAASRGH-RECLETLITLCGADVDVIDTNGC 278
S S + L++ GA+V A + G T L+ A G+ E + TLI L GADV+ D
Sbjct: 284 PSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIML-GADVNAADRLYI 342
Query: 279 SALFYAVTLG-HADATTLLLQYGATPNRQDRKGRT 312
+ L A TL + D LL+ GA N +D +T
Sbjct: 343 TPLHQASTLDRNKDIVITLLELGANVNARDYCDKT 377
>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel;
Provisional.
Length = 823
Score = 60.3 bits (146), Expect = 4e-10
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 37/154 (24%)
Query: 179 ASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEA 238
+ GN A+L+ LL +D ++ D GR P+ AAS G D +L L+K NV
Sbjct: 532 VASTGNA-----ALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI 586
Query: 239 HDKDGLTAL----------------HC---------------AASRGHRECLETLITLCG 267
D +G TAL H AA R ++ L+ G
Sbjct: 587 RDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQ-G 645
Query: 268 ADVDVIDTNGCSALFYAVTLGHADATTLLLQYGA 301
+VD D G +AL A+ H D LL+ GA
Sbjct: 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA 679
Score = 58.3 bits (141), Expect = 2e-09
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 190 LAVLKVLLHHNV---DVNVVDKDGRQP-----------ILWAASAGSSDAILALVKAGAN 235
+ +LK L H+ D+NV D G +L AS G++ + L+KA +
Sbjct: 491 VVILKNFLQHHKELHDLNVGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKAKLD 550
Query: 236 VEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTL 295
+ D G T LH AAS+G+ +C+ L+ +V + D NG +AL+ A++ H +
Sbjct: 551 PDIGDSKGRTPLHIAASKGYEDCVLVLLKH-ACNVHIRDANGNTALWNAISAKHHKIFRI 609
Query: 296 LLQYGATPN 304
L + + +
Sbjct: 610 LYHFASISD 618
Score = 54.5 bits (131), Expect = 4e-08
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 96 DEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155
D G TPLH+AA G + LL H NV+ +D G++ + W + + + +L
Sbjct: 555 DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL-WNAISAKHHKIFRILYHF 613
Query: 156 AEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPIL 215
A S P H A + A++ + L +K LL ++V+ D G +
Sbjct: 614 ASISDP--------HAAGDLLCTAAKRND-----LTAMKELLKQGLNVDSEDHQGATALQ 660
Query: 216 WAASAGSSDAILALVKAGANVEAHDKD 242
A + D + L+ GA+V+ + D
Sbjct: 661 VAMAEDHVDMVRLLIMNGADVDKANTD 687
Score = 37.5 bits (87), Expect = 0.008
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 233 GANVEAHDKDGLTA-LHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHAD 291
G N HD + + L AS G+ LE L+ D D+ D+ G + L A + G+ D
Sbjct: 514 GDNGGEHDDPNMASNLLTVASTGNAALLEELLK-AKLDPDIGDSKGRTPLHIAASKGYED 572
Query: 292 ATTLLLQYGATPNRQDRKGRT 312
+LL++ + +D G T
Sbjct: 573 CVLVLLKHACNVHIRDANGNT 593
>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional.
Length = 477
Score = 59.1 bits (143), Expect = 9e-10
Identities = 62/269 (23%), Positives = 103/269 (38%), Gaps = 48/269 (17%)
Query: 69 LHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLA-------- 120
LH E L +++L ++ + D TPLH+ N + ++
Sbjct: 41 LHQAVEARNLDVVKSLLTRGHNVNQP-DHRDLTPLHIICKEPNKLGMKEMIRSINKCSVF 99
Query: 121 ----------HRANV--------NSQDNEGHS-VVHWATVCG----EVEALETVLSAGAE 157
+ NV N N +V+ E E + +LS GA+
Sbjct: 100 YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD 159
Query: 158 PSTPDIHGG-YPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216
+ D H G +HYA++ D R+ ++LL + +VN+ DK P+
Sbjct: 160 INMKDRHKGNTALHYATE--------NKDQRL----TELLLSYGANVNIPDKTNNSPLHH 207
Query: 217 AASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDT- 275
A + + L++ GA+ +A DK G T LH + + L+ G DV+
Sbjct: 208 AVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYI 267
Query: 276 NGCSALFYAVTLGHADATTLLLQYGATPN 304
G +AL ++ LLL+YGA N
Sbjct: 268 LGLTALH--SSIKSERKLKLLLEYGADIN 294
Score = 54.1 bits (130), Expect = 4e-08
Identities = 49/182 (26%), Positives = 71/182 (39%), Gaps = 23/182 (12%)
Query: 92 IEAADED-GYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALET 150
I D G T LH A + L LL++ ANVN D +S +H A +
Sbjct: 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHI 219
Query: 151 VLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDG 210
+L GA D G P+H + C +LK+LL H VDVN
Sbjct: 220 LLENGASTDARDKCGNTPLHISVGYC-----------KDYDILKLLLEHGVDVNA----- 263
Query: 211 RQPIL----WAASAGSSDAILALVKAGANVEAHDKDGLTALHCAA-SRGHRECLETLIT- 264
+ IL +S S + L++ GA++ + + LT L A LI+
Sbjct: 264 KSYILGLTALHSSIKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323
Query: 265 LC 266
+C
Sbjct: 324 IC 325
Score = 54.1 bits (130), Expect = 4e-08
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 102 PLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP 161
PLH A A N+ ++ +LL NVN D+ + +H ++ ++ + + S
Sbjct: 40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV- 98
Query: 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVV--DKDGRQPILWAAS 219
Y + + +V + +L + +++V DK + I+
Sbjct: 99 ----FYTLVAIKDAFNN-----RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDII---- 145
Query: 220 AGSSDAILALVKAGANVEAHDKDGL-TALHCAASRGHRECLETLITLCGADVDVIDTNGC 278
++ L+ GA++ D+ TALH A + E L+ GA+V++ D
Sbjct: 146 --EAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLL-SYGANVNIPDKTNN 202
Query: 279 SALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
S L +AV + +LL+ GA+ + +D+ G T
Sbjct: 203 SPLHHAVKHYNKPIVHILLENGASTDARDKCGNT 236
Score = 49.5 bits (118), Expect = 1e-06
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 44 DAEVKAILASRPNAVRERDR-TRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTP 102
+AE+ +L S + +DR T LHY EN E +L + + D+ +P
Sbjct: 146 EAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSP 204
Query: 103 LHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWAT-VCGEVEALETVLSAGAEPSTP 161
LH A N P++H LL + A+ +++D G++ +H + C + + L+ +L G + +
Sbjct: 205 LHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAK 264
Query: 162 D-IHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPI 214
I G +H + + SE LK+LL + D+N ++ P+
Sbjct: 265 SYILGLTALHSSIK-----SE---------RKLKLLLEYGADINSLNSYKLTPL 304
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies).
Length = 54
Score = 52.2 bits (126), Expect = 2e-09
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
GR + AA +G + + L++ G ++ D+DG TALH AA G+ E L+ L+
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 46.1 bits (110), Expect = 3e-07
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 243 GLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLL 297
G TALH AA G E ++ L+ G D++ D +G +AL A G+ + LLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEK-GVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 46.1 bits (110), Expect = 4e-07
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 99 GYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
G T LH AAI+G + L+ LL ++N D +G++ +H A G +E L+
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLK 51
Score = 36.1 bits (84), Expect = 0.001
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 67 TVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLL 119
T LH A + L + +LE D I DEDG T LH+AA GN+ ++ LL
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVD-INRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 35.3 bits (82), Expect = 0.003
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 190 LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALV 230
L ++K LL VD+N D+DG + AA G+ + + L+
Sbjct: 14 LELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 31.1 bits (71), Expect = 0.069
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 279 SALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
+AL A G + LL+ G NR D G T
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVDINRTDEDGNT 36
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies).
Length = 56
Score = 47.7 bits (114), Expect = 1e-07
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 196 LLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA 250
L H +D+N D +G P+ AA G+ + + L+K G ++ D DGLTAL A
Sbjct: 2 LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 42.0 bits (99), Expect = 9e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 84 ILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139
+LE P + A D +G TPLHLAA G + L+ LL ++N +D++G + + A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 39.3 bits (92), Expect = 1e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 229 LVKAG-ANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYA 284
L++ G ++ A D +G T LH AA G E ++ L+ G D+++ D++G +AL A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKP-GVDLNLRDSDGLTALDLA 56
Score = 31.6 bits (72), Expect = 0.054
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 118 LLAHR-ANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYA 172
LL H ++N+ D G++ +H A G +E ++ +L G + + D G + A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 30.8 bits (70), Expect = 0.087
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 262 LITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
L+ D++ D NG + L A G + LL+ G N +D G T
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLT 51
Score = 28.5 bits (64), Expect = 0.68
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
Query: 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWA 217
D +G P+H A+ G +++ LL VD+N+ D DG + A
Sbjct: 13 DGNGNTPLHLAA-KYGALE-----------LVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 26.2 bits (58), Expect = 5.2
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 50 ILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLA 106
+L P + D T LH A+ L + +L+ DL D DG T L LA
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDL-NLRDSDGLTALDLA 56
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities. Repeats 13-24 are especially active,
with known sites of interaction for the Na/K ATPase,
Cl/HCO(3) anion exchanger, voltage-gated sodium channel,
clathrin heavy chain and L1 family cell adhesion
molecules. The ANK repeats are found to form a
contiguous spiral stack such that ion transporters like
the anion exchanger associate in a large central cavity
formed by the ANK repeat spiral, while clathrin and cell
adhesion molecules associate with specific regions
outside this cavity.
Length = 33
Score = 45.2 bits (108), Expect = 4e-07
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDN 130
DG TPLHLAA G++ ++ LL A+VN++D
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 39.8 bits (94), Expect = 4e-05
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDVID 274
DG T LH AA GH E ++ L+ GADV+ D
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLE-AGADVNARD 32
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 276 NGCSALFYAVTLGHADATTLLLQYGATPNRQDR 308
+G + L A GH + LLL+ GA N +D+
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 31.0 bits (71), Expect = 0.046
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 209 DGRQPILWAASAGSSDAILALVKAGANVEAHDK 241
DG P+ AA G + + L++AGA+V A DK
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 26.4 bits (59), Expect = 2.1
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 12/45 (26%)
Query: 164 HGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDK 208
G P+H A+ GH V+K+LL DVN DK
Sbjct: 1 DGNTPLHLAA-RNGHLE-----------VVKLLLEAGADVNARDK 33
>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional.
Length = 489
Score = 47.1 bits (112), Expect = 6e-06
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 185 DVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG---SSDAILALVKAGANVEAHDK 241
D + L ++K+L+ + D+N + DG P+ S G + + +L +++ GA+ DK
Sbjct: 84 DYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDK 143
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTL 287
DG T L H +E + L VD+ N + TL
Sbjct: 144 DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI---NTHNNKEKYDTL 186
Score = 45.2 bits (107), Expect = 2e-05
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 190 LAVLKVLLHHNVDVNVVDKDGRQPILWAAS-----AGSSDAILALVKAGANVEAHDKDGL 244
++K+ ++ +VN +D + P+ S D + L++ GA++ + DG
Sbjct: 51 TDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGE 110
Query: 245 TALHCAASRGHRECLETLITLC--GADVDVIDTNGCSALFYAVTLGHA---DATTLLLQY 299
T L+C S G+ LE L+ + GAD ++D +G + L + H + LLL+
Sbjct: 111 TPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK 170
Query: 300 GATPNRQDRK 309
G N + K
Sbjct: 171 GVDINTHNNK 180
>gnl|CDD|140343 PTZ00322, PTZ00322,
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase;
Provisional.
Length = 664
Score = 45.3 bits (107), Expect = 3e-05
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 194 KVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASR 253
++LL D N D DGR P+ A + G + L++ GA+ DKDG T L A
Sbjct: 99 RILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158
Query: 254 GHRECLETLITLCGADVD 271
G RE ++ L +
Sbjct: 159 GFREVVQLLSRHSQCHFE 176
Score = 44.9 bits (106), Expect = 4e-05
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 124 NVNSQDNEGHSVVHWATV--C-----GEVEALETVLSAGAEPSTPDIHGGYPIHYASQMC 176
N+ +++ V H TV C G+ +L+ GA+P+ D G P+H A
Sbjct: 67 NLTTEEVIDPVVAHMLTVELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN- 125
Query: 177 GHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILAL 229
GH + V++VLL D ++DKDG+ P+ A G + + L
Sbjct: 126 GH-----------VQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
Score = 41.4 bits (97), Expect = 4e-04
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 218 ASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNG 277
A++G + L+ GA+ D DG T LH A + GH + + L+ GAD ++D +G
Sbjct: 90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEF-GADPTLLDKDG 148
Query: 278 CSALFYAVTLGHADATTLLLQY 299
+ L A G + LL ++
Sbjct: 149 KTPLELAEENGFREVVQLLSRH 170
Score = 40.7 bits (95), Expect = 8e-04
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 267 GADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
GAD + D +G + L A GH +LL++GA P D+ G+T
Sbjct: 105 GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKT 150
Score = 36.4 bits (84), Expect = 0.018
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 104 HLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDI 163
LAA +G+ LL A+ N +D +G + +H A G V+ + +L GA+P+ D
Sbjct: 88 QLAA-SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146
Query: 164 HGGYPIHYASQ 174
G P+ A +
Sbjct: 147 DGKTPLELAEE 157
Score = 33.3 bits (76), Expect = 0.17
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 96 DEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155
D DG TPLH+A G+V ++ LL A+ D +G + + A G E ++ +
Sbjct: 112 DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHS 171
Query: 156 AEPSTPDIHG 165
+
Sbjct: 172 QCHFELGANA 181
Score = 31.8 bits (72), Expect = 0.59
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 61 RDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLA 120
RD +T LH N + +LE D D+DG TPL LA G ++ L
Sbjct: 111 RDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENGFREVVQLLSR 169
Query: 121 H 121
H
Sbjct: 170 H 170
>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities.
Length = 30
Score = 37.6 bits (88), Expect = 2e-04
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVN 126
DG TPLHLAA GN+ L+ LL H A++N
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADIN 29
Score = 31.1 bits (71), Expect = 0.046
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDV 272
DG T LH AA G+ E ++ L+ GAD++
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLE-HGADINA 30
Score = 29.1 bits (66), Expect = 0.21
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 209 DGRQPILWAASAGSSDAILALVKAGANVEA 238
DG P+ AA G+ + + L++ GA++ A
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 27.6 bits (62), Expect = 0.79
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 276 NGCSALFYAVTLGHADATTLLLQYGATPN 304
+G + L A G+ + LLL++GA N
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADIN 29
>gnl|CDD|197603 smart00248, ANK, ankyrin repeats. Ankyrin repeats are about 33
amino acids long and occur in at least four consecutive
copies. They are involved in protein-protein
interactions. The core of the repeat seems to be an
helix-loop-helix structure.
Length = 30
Score = 37.6 bits (88), Expect = 2e-04
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVN 126
DG TPLHLAA GN+ ++ LL A++N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
Score = 34.5 bits (80), Expect = 0.002
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDV 272
DG T LH AA G+ E ++ L+ GAD++
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDK-GADINA 30
Score = 29.5 bits (67), Expect = 0.16
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 276 NGCSALFYAVTLGHADATTLLLQYGATPN 304
+G + L A G+ + LLL GA N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
Score = 26.0 bits (58), Expect = 2.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 209 DGRQPILWAASAGSSDAILALVKAGANVEA 238
DGR P+ AA G+ + + L+ GA++ A
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel
protein. The Transient Receptor Potential Ca2+ Channel
(TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also
been called the store-operated calcium channel (SOC)
family. The prototypical members include the Drosophila
retinal proteinsTRP and TRPL (Montell and Rubin, 1989;
Hardie and Minke, 1993). SOC members of the family
mediate the entry of extracellular Ca2+ into cells in
responseto depletion of intracellular Ca2+ stores
(Clapham, 1996) and agonist stimulated production of
inositol-1,4,5 trisphosphate (IP3). One member of the
TRP-CCfamily, mammalian Htrp3, has been shown to form a
tight complex with the IP3 receptor (TC #1.A.3.2.1).
This interaction is apparently required for IP3
tostimulate Ca2+ release via Htrp3. The vanilloid
receptor subtype 1 (VR1), which is the receptor for
capsaicin (the ?hot? ingredient in chili peppers) and
servesas a heat-activated ion channel in the pain
pathway (Caterina et al., 1997), is also a member of
this family. The stretch-inhibitable non-selective
cation channel(SIC) is identical to the vanilloid
receptor throughout all of its first 700 residues, but
it exhibits a different sequence in its last 100
residues. VR1 and SICtransport monovalent cations as
well as Ca2+. VR1 is about 10x more permeable to Ca2+
than to monovalent ions. Ca2+ overload probably causes
cell deathafter chronic exposure to capsaicin.
(McCleskey and Gold, 1999) [Transport and binding
proteins, Cations and iron carrying compounds].
Length = 743
Score = 42.4 bits (100), Expect = 2e-04
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 17/122 (13%)
Query: 17 ENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENT 76
E + + + G ++L AA + ++ E+ +L + D T+LH +
Sbjct: 39 EPKKLNINCPDRL-GRSALFVAAIENENLELTELLLNLSCRGAVGD----TLLHAISLEY 93
Query: 77 ILSCAETI---LEVAPD---LIEAADED------GYTPLHLAAIAGNVPLIHTLLAHRAN 124
+ + + L L A D+ G T LHLAA N ++ LL A+
Sbjct: 94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS 153
Query: 125 VN 126
V
Sbjct: 154 VP 155
>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional.
Length = 446
Score = 40.8 bits (95), Expect = 7e-04
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 96 DEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGE--VEALETVLS 153
D+DG PLH+A+ N ++ LL H A+ N+ D + + +++ + + +E + ++
Sbjct: 69 DDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQ 128
Query: 154 AGAE-PSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ 212
GA+ ++ D G P+ C SE V K ++ + +VDK G+
Sbjct: 129 YGAKINNSVDEEGCGPL----LACTDPSER---------VFKKIMSIGFEARIVDKFGKN 175
Query: 213 PI---LWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASR 253
I L + + +S I ++K G + D DG T LH S+
Sbjct: 176 HIHRHLMSDNPKAS-TISWMMKLGISPSKPDHDGNTPLHIVCSK 218
Score = 39.7 bits (92), Expect = 0.002
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 85 LEVAPDLIEAADEDG-YTPLH-LAAIAG-NVPLIHTLLAHRANVNSQDNEGHSVVHWATV 141
L+V ++++A + G Y LH I G + + LL + N D++G+ +H A+
Sbjct: 22 LDVFRNMLQAIEPSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASK 81
Query: 142 CGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNV 201
+ +L+ GA+P+ D P++Y S G D V + + +L+ +
Sbjct: 82 INNNRIVAMLLTHGADPNACDKQHKTPLYYLS---------GTDDEV-IERINLLVQYGA 131
Query: 202 DV-NVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALH 248
+ N VD++G P+L A + S ++ G DK G +H
Sbjct: 132 KINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIH 178
Score = 30.0 bits (67), Expect = 1.6
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 55 PNAVRERDRTRKTVLHYCA--ENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNV 112
PNA D+ KT L+Y + ++ ++ +++ + + DE+G PL LA +
Sbjct: 98 PNAC---DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPL-LACTDPSE 153
Query: 113 PLIHTLLA--HRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIH 170
+ +++ A + + + H H + + + ++ G PS PD G P+H
Sbjct: 154 RVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLH 213
Query: 171 YASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPI 214
+C + + ++ +LL + DVN +K G P+
Sbjct: 214 I---VCSKTVK-------NVDIINLLL-PSTDVNKQNKFGDSPL 246
>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional.
Length = 284
Score = 40.0 bits (93), Expect = 9e-04
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 129 DNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRV 188
D GHS +++A V + T+L+AGA + + +P+H A+ + D ++
Sbjct: 27 DVHGHSALYYAIADNNVRLVCTLLNAGALKNL--LENEFPLHQAATL--------EDTKI 76
Query: 189 GLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGL-TAL 247
+K+LL +D + D G + +A +G+ + VK + + K G T+
Sbjct: 77 ----VKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 132
Query: 248 HCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQD 307
+ A + ++ + D+ C + + GH D LLL Y + N +
Sbjct: 133 YHAVMLNDVSIVSYFLSEIPSTFDLAILLSC--IHITIKNGHVDMMILLLDYMTSTNTNN 190
Score = 31.2 bits (70), Expect = 0.67
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSA 154
AD G++ L+ A NV L+ TLL A N +NE +H A + + ++ +L +
Sbjct: 26 ADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLENE--FPLHQAATLEDTKIVKILLFS 83
Query: 155 GAEPSTPDIHGGYPIHYA 172
G + S D G ++YA
Sbjct: 84 GMDDSQFDDKGNTALYYA 101
>gnl|CDD|165157 PHA02795, PHA02795, ankyrin-like protein; Provisional.
Length = 437
Score = 39.6 bits (92), Expect = 0.002
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 190 LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHC 249
L + K+ + + D+N +D GR + A AG D + L++ GANV A +G T L
Sbjct: 201 LEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDV 260
Query: 250 AASRG 254
A RG
Sbjct: 261 AVDRG 265
Score = 30.7 bits (69), Expect = 1.2
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 74 ENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGH 133
E T+L + + D I D G T L+ A AG + L+ LL + ANVN+ + G+
Sbjct: 197 EPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGY 255
Query: 134 SVVHWATVCGEVEA 147
+ + A G V A
Sbjct: 256 TCLDVAVDRGSVIA 269
>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional.
Length = 494
Score = 37.8 bits (88), Expect = 0.006
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 190 LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHC 249
VL +L + + +N DK G P+L +A + +A L+K G ++ KDG T L
Sbjct: 237 FKVLNFILKY-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTY 295
Query: 250 AASRG 254
A G
Sbjct: 296 AIKHG 300
Score = 29.3 bits (66), Expect = 3.1
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 96 DEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155
D+ G+ PL ++A N + LL ++ + +G +V+ +A G ++ L +L
Sbjct: 253 DKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRIL--Q 310
Query: 156 AEPSTPDIH 164
+P I
Sbjct: 311 LKPGKYLIK 319
>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional.
Length = 300
Score = 33.4 bits (76), Expect = 0.14
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 213 PILWAASAGSSDAILALVKAGANVEAHDKDG-LTALHCAASRGHRECLETLITLCGADVD 271
P+++A + DA L++ GA+V + ++ +T L+ + G +CLE L++ GAD++
Sbjct: 73 PLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSY-GADIN 131
Query: 272 VI 273
+
Sbjct: 132 IQ 133
Score = 30.7 bits (69), Expect = 0.81
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 81 AETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWAT 140
A+ ++ D+ A+E TPL+++ + G + + LL++ A++N Q N+ + + A
Sbjct: 86 AKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL 145
Query: 141 -VC 142
+C
Sbjct: 146 MIC 148
>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional.
Length = 209
Score = 31.7 bits (72), Expect = 0.36
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 188 VGLAVLKVLLHHNVDVNVVDKD-GRQPILWAASAG---SSDAILALVKAGANVEAHDKDG 243
V + +LK L+ + DVN +D + S + + L+ +G+++ D+DG
Sbjct: 64 VNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDG 123
Query: 244 LTALH 248
LH
Sbjct: 124 KNLLH 128
Score = 28.2 bits (63), Expect = 5.1
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 92 IEAADEDGYTPLH--LAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVH 137
I DEDG LH + + +I L+ + ++D + +++++
Sbjct: 116 ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILY 163
>gnl|CDD|165098 PHA02730, PHA02730, ankyrin-like protein; Provisional.
Length = 672
Score = 31.9 bits (72), Expect = 0.51
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 269 DVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPN 304
D+D+ID + L+YAV + + LL+YGA+ N
Sbjct: 454 DIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVN 489
>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional.
Length = 169
Score = 30.4 bits (68), Expect = 0.78
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Query: 199 HNVDVNVVDKDGRQPILWAASAG----SSDAILALVKAGANVEAHDK-DGLTALHCAASR 253
H +N D G+ I AA +++ I L++ GA++ A + +G TALH AA R
Sbjct: 49 HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHR 108
Query: 254 GHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTY 313
+ E L G D+ + + S A+ +L + AT R +
Sbjct: 109 RDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS-------RGF 161
Query: 314 EYQWRSVV 321
+ +V
Sbjct: 162 SNENTDIV 169
>gnl|CDD|204440 pfam10304, DUF2411, Domain of unknown function (DUF2411). This is
a 38 residue domain that is found in proteins at the
extreme C-terminal end of some HEAT repeats Pfam:
PF02985. the function of this domain is not known.
Length = 36
Score = 27.4 bits (62), Expect = 0.84
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 6/29 (20%)
Query: 234 ANVEAHDKDGLTALHCAASRGHRECLETL 262
VE D D L H R+ LE+L
Sbjct: 11 KYVEETDNDYLVREHA------RDVLESL 33
>gnl|CDD|238558 cd01138, FeuA, Periplasmic binding protein FeuA. These proteins
have predicted to function as initial receptors in ABC
transport of metal ions in some eubacterial species.
They belong to the TroA superfamily of periplasmic metal
binding proteins that share a distinct fold and ligand
binding mechanism. A typical TroA protein is comprised
of two globular subdomains connected by a single helix
and can bind their ligands in the cleft between these
domains.
Length = 248
Score = 29.2 bits (66), Expect = 2.6
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 82 ETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANV 125
E +LE+ PDLI + + L+ IA VP+ + +
Sbjct: 60 EKVLELKPDLIIVSSKQEENYEKLSKIAPTVPVSYNSSDWEEQL 103
>gnl|CDD|237109 PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional.
Length = 481
Score = 29.0 bits (65), Expect = 4.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 86 EVAPDLIEAADEDGYTPLHLAAIAGNVPL 114
E+A +I+A D+DGY L+ +A
Sbjct: 144 EIARTIIDALDDDGYLRQDLSELAEAADP 172
>gnl|CDD|220675 pfam10287, DUF2401, Putative TOS1-like glycosyl hydrolase
(DUF2401). This family of proteins is conserved in
fungi. One member is annotated putatively as OPEL, a
house-keeping protein, but this could not be confirmed.
It contains 5 highly conserved cysteines two of which
form a characteristic CGC sequence motif. It has
recently been shown that this family is related to known
glycosyl hydrolases.
Length = 235
Score = 28.0 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 138 WATVCGEVEALETVLSAGAEPSTPDIHGG 166
WA+ CGE + E VL++G+E +H G
Sbjct: 147 WASGCGEFDIFE-VLNSGSEKLISTLHDG 174
>gnl|CDD|217563 pfam03446, NAD_binding_2, NAD binding domain of 6-phosphogluconate
dehydrogenase. The NAD binding domain of
6-phosphogluconate dehydrogenase adopts a Rossmann fold.
Length = 163
Score = 27.8 bits (63), Expect = 5.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 175 MCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS----AGSSDAILALV 230
M + + G V V +N V++ + + AAS S+D ++ +V
Sbjct: 15 MALNLLKAGYTVTV----------YNRTPEKVEELVAEGAVGAASPAEFVASADVVITMV 64
Query: 231 KAGANVEA 238
AGA V+A
Sbjct: 65 PAGAAVDA 72
>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional.
Length = 661
Score = 28.0 bits (62), Expect = 8.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 240 DKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAV 285
DK G T LH A R +++ L +L+ G+DV++ NG + + A+
Sbjct: 449 DKRGETLLH-KAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAI 493
>gnl|CDD|218890 pfam06089, Asparaginase_II, L-asparaginase II. This family
consists of several bacterial L-asparaginase II
proteins. L-asparaginase (EC:3.5.1.1) catalyzes the
hydrolysis of L-asparagine to L-aspartate and ammonium.
Rhizobium etli possesses two asparaginases: asparaginase
I, which is thermostable and constitutive, and
asparaginase II, which is thermolabile, induced by
asparagine and repressed by the carbon source.
Length = 325
Score = 27.5 bits (62), Expect = 9.8
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 27/93 (29%)
Query: 198 HHNVDVNVVDKDGRQPILWAASAGSSDAI------------LALVKAGANVEAHDKDGLT 245
H VVD DGR +L SAG +A L L+++G A +K GL+
Sbjct: 13 VHRGHAVVVDADGR--VLA--SAGDPEAPTFPRSAAKPFQALPLLESG----AAEKYGLS 64
Query: 246 ----ALHCAASRG---HRECLETLITLCGADVD 271
AL CA+ G H E + +++ G D D
Sbjct: 65 DEELALACASHSGEDEHVERVRSILAKAGLDED 97
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.132 0.393
Gapped
Lambda K H
0.267 0.0786 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 15,821,504
Number of extensions: 1473129
Number of successful extensions: 1768
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1622
Number of HSP's successfully gapped: 128
Length of query: 321
Length of database: 10,937,602
Length adjustment: 97
Effective length of query: 224
Effective length of database: 6,635,264
Effective search space: 1486299136
Effective search space used: 1486299136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.4 bits)