RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy138
(321 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 135 bits (340), Expect = 2e-37
Identities = 74/280 (26%), Positives = 116/280 (41%), Gaps = 15/280 (5%)
Query: 33 TSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLI 92
T L A+ G VK +L + + +T LH A A+ +L+ +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-V 59
Query: 93 EAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVL 152
A +D TPLH AA G+ ++ LL + AN N GH+ +H A G VE + +L
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119
Query: 153 SAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ 212
A + G P+H A++ G + V ++LL + N K+G
Sbjct: 120 EKEASQACMTKKGFTPLHVAAK-YGK-----------VRVAELLLERDAHPNAAGKNGLT 167
Query: 213 PILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDV 272
P+ A + D + L+ G + + +G T LH AA + E +L+ G +
Sbjct: 168 PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ-YGGSANA 226
Query: 273 IDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
G + L A GHA+ LLL A N ++ G T
Sbjct: 227 ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT 266
Score = 128 bits (321), Expect = 1e-34
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPST 160
TPLH+A+ G++P++ LL A+ N + + + +H A G E + +L A+ +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 161 PDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220
P+H A++ GH ++K+LL +N + N+ G P+ AA
Sbjct: 62 KAKDDQTPLHCAAR-IGH-----------TNMVKLLLENNANPNLATTAGHTPLHIAARE 109
Query: 221 GSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSA 280
G + +LAL++ A+ K G T LH AA G E L+ A + NG +
Sbjct: 110 GHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGLTP 168
Query: 281 LFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317
L AV + D LLL G +P+ G T +
Sbjct: 169 LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 205
Score = 120 bits (301), Expect = 9e-32
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 14/293 (4%)
Query: 20 SFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILS 79
+ + + ++ A + E L + + + T LH A+ +
Sbjct: 87 ENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 146
Query: 80 CAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139
AE +LE AA ++G TPLH+A N+ ++ LL + +S G++ +H A
Sbjct: 147 VAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 205
Query: 140 TVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHH 199
+VE ++L G + + G P+H A+Q ++ +LL
Sbjct: 206 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEG------------HAEMVALLLSK 253
Query: 200 NVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL 259
+ N+ +K G P+ A G L+K G V+A + G T LH A+ G+ + +
Sbjct: 254 QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLV 313
Query: 260 ETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
+ + ADV+ G S L A GH D TLLL+ GA+PN G T
Sbjct: 314 K-FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT 365
Score = 116 bits (290), Expect = 3e-30
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 15/283 (5%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
+ T L AA+ G K +L ++ V + + +T LH A + + +LE
Sbjct: 32 KVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLENNA 90
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
+ A G+TPLH+AA G+V + LL A+ +G + +H A G+V E
Sbjct: 91 N-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 149
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209
+L A P+ +G P+H A + L ++K+LL + +
Sbjct: 150 LLLERDAHPNAAGKNGLTPLHVAVH-HNN-----------LDIVKLLLPRGGSPHSPAWN 197
Query: 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGAD 269
G P+ AA + +L++ G + A G+T LH AA GH E + + A+
Sbjct: 198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL-LLSKQAN 256
Query: 270 VDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
++ + +G + L GH +L+++G + R G T
Sbjct: 257 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT 299
Score = 115 bits (287), Expect = 9e-30
Identities = 66/253 (26%), Positives = 100/253 (39%), Gaps = 16/253 (6%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
G T L A + ++ +L R + T LH A+ + A ++L+
Sbjct: 164 NGLTPLHVAVHHN-NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 222
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
A G TPLHLAA G+ ++ LL+ +AN N + G + +H G V +
Sbjct: 223 S-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 281
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209
++ G G P+H AS ++K LL H DVN K
Sbjct: 282 VLIKHGVMVDATTRMGYTPLHVASHYGNIK------------LVKFLLQHQADVNAKTKL 329
Query: 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLC--G 267
G P+ AA G +D + L+K GA+ DG T L A G+ + L +
Sbjct: 330 GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDET 389
Query: 268 ADVDVIDTNGCSA 280
+ V V D + S
Sbjct: 390 SFVLVSDKHRMSF 402
Score = 72.3 bits (176), Expect = 7e-15
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 244 LTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATP 303
LT LH A+ GH ++ L+ GA +V + + L A GH + LLQ A
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQ-RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 304 NRQDRKGRT 312
N + + +T
Sbjct: 60 NAKAKDDQT 68
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 120 bits (302), Expect = 8e-33
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 28/294 (9%)
Query: 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVA 88
+E L+ A Q V+ +L N + + T LH + + E +L
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 89 PDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEAL 148
D + LAAIAG+V L+ L+ A+VN D G + A V G+V+AL
Sbjct: 63 ADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121
Query: 149 ETVLSAGAEPSTPDIH----------GGYPIHYASQMCGHASEMGNDVRVGLAVLKVLL- 197
+ + GA + G + A++ GH + VLK+LL
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK-GH-----------VEVLKILLD 169
Query: 198 HHNVDVNVVDKDGRQPILWAASAGSSDAILA----LVKAGANVEAHDKDGLTALHCAASR 253
DVN D GR ++ A + + A L+ GA+V + G T L A +
Sbjct: 170 EMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 229
Query: 254 GHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQD 307
H ++ L+ +++ D++G +AL AV L LL + GA+ + D
Sbjct: 230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 101 bits (252), Expect = 1e-25
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 7/251 (2%)
Query: 67 TVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVN 126
+L +N + + +LE ++ +E G+TPLH A ++ LL H A+
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 127 SQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186
+ G + A + G V+ L+ LS GA+ + D +G A+ +
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126
Query: 187 RVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALV-KAGANVEAHDKDGLT 245
R A + + D + K G ++ AA G + + L+ + GA+V A D G
Sbjct: 127 RG--ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 246 ALHCAASRGHRECLETLITL---CGADVDVIDTNGCSALFYAVTLGHADATTLLL-QYGA 301
AL A +E + L GADV+V G + L AV H LL Q
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244
Query: 302 TPNRQDRKGRT 312
N D G+T
Sbjct: 245 EINDTDSDGKT 255
Score = 92.7 bits (229), Expect = 2e-22
Identities = 68/233 (29%), Positives = 91/233 (39%), Gaps = 27/233 (11%)
Query: 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNE-GHSVVHWATVCGEVEALETVLS 153
A + L A +V L+ LL ANVN Q+ E G + +H A + +E +L
Sbjct: 1 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60
Query: 154 AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQP 213
GA+P +G P A+ DVN D G
Sbjct: 61 HGADPVLRKKNGATPFLLAAIAGSVKLLKLFL------------SKGADVNECDFYGFTA 108
Query: 214 ILWAASAGSSDAILALVKAGAN----------VEAHDKDGLTALHCAASRGHRECLETLI 263
+ AA G A+ L K GAN E K G TAL AA +GH E L+ L+
Sbjct: 109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168
Query: 264 TLCGADVDVIDTNG----CSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
GADV+ D G AL + T LLL +GA N + +G+T
Sbjct: 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT 221
Score = 77.3 bits (189), Expect = 6e-17
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 12 PNLVWENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHY 71
N+ + + + GAT+LM AA++G +K +L V D + L +
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188
Query: 72 CAENTILSCAETILEVAPDL---IEAADEDGYTPLHLAAIAGNVPLIHTLLAHR-ANVNS 127
++ S E I + D + E G TPL LA ++ L+ LL +N
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248
Query: 128 QDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDI 163
D++G + + A + E + GA D+
Sbjct: 249 TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284
Score = 50.0 bits (118), Expect = 1e-07
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 209 DGRQPILWAASAGSSDAILALVKAGANVEAHDKD-GLTALHCAASRGHRECLETLITLCG 267
+ ++ A D + L++ GANV +++ G T LH A + +E L+ G
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR-HG 62
Query: 268 ADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTY 313
AD + NG + A G L L GA N D G T
Sbjct: 63 ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA 108
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 117 bits (293), Expect = 2e-31
Identities = 44/265 (16%), Positives = 85/265 (32%), Gaps = 9/265 (3%)
Query: 29 MEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVA 88
M+ L ++ N E + + H ++ + +
Sbjct: 37 MKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQ 96
Query: 89 PDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA---TVCGEV 145
+L DE G TPLH N+ L+ L+ H +N DN G S + A +
Sbjct: 97 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 156
Query: 146 EALETVLSAGAEP-STPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVN 204
E +L D +H+ G ++ ++
Sbjct: 157 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 216
Query: 205 VVDKDGRQPILWAASAGSSDAILALV----KAGANVEAHDKDGLTALHCAASRGHRECLE 260
+ ++ + D+IL + + A D +G T L+ AA G+ ++
Sbjct: 217 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 276
Query: 261 TLITLCGADVDVIDTNGCSALFYAV 285
L+ GAD + + +G + +
Sbjct: 277 ALLDY-GADPFIANKSGLRPVDFGA 300
Score = 50.8 bits (120), Expect = 6e-08
Identities = 14/125 (11%), Positives = 42/125 (33%), Gaps = 1/125 (0%)
Query: 190 LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHC 249
L ++K L V+ N + + +L +N +
Sbjct: 19 LKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 78
Query: 250 AASRGHRECLETLITLCGADVDV-IDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDR 308
+ + + ++++ +D +G + L + ++ + + L+++G+ D
Sbjct: 79 VSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN 138
Query: 309 KGRTY 313
G +
Sbjct: 139 MGESC 143
Score = 42.3 bits (98), Expect = 4e-05
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 26 HNTMEGATSLMYAAQQGKDAEVKAILASR--PNAVRERDRTRKTVLHYCAENTILSCAET 83
T E + + KD+ ++ + N + +D T L+ A +S +
Sbjct: 218 SGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 277
Query: 84 ILEVAPDLIEAADEDGYTPLHLAA 107
+L+ D A++ G P+ A
Sbjct: 278 LLDYGAD-PFIANKSGLRPVDFGA 300
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 103 bits (256), Expect = 8e-27
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 14/231 (6%)
Query: 33 TSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLI 92
+ A GK E+K + + + D+ +T LH+ E +L++ +
Sbjct: 5 LMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-V 63
Query: 93 EAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVL 152
D+ G++PLH+AA AG ++ LL A VN+ + G + +H+A E +L
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 153 SAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ 212
GA P D + +H A+ +LL++ N+ D +G
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIH------------ILLYYKASTNIQDTEGNT 171
Query: 213 PILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
P+ A + LV GA++ +K+ T L A G L+ ++
Sbjct: 172 PLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 99.3 bits (246), Expect = 2e-25
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 103 LHLAAIAGNVPLI-HTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTP 161
+ A +G + + ++LA ++ D + + +HWA SAG
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWAC------------SAGHTEIVE 54
Query: 162 DIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAG 221
+ G + ++K LL VN V+++G P+ +AAS
Sbjct: 55 FLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN 114
Query: 222 SSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSAL 281
+ + L++ GAN +A D TA+H AA++G+ + + L+ A ++ DT G + L
Sbjct: 115 RHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY-YKASTNIQDTEGNTPL 173
Query: 282 FYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
A + LL+ GA+ ++++ +T
Sbjct: 174 HLACDEERVEEAKLLVSQGASIYIENKEEKT 204
Score = 95.8 bits (237), Expect = 5e-24
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 14/230 (6%)
Query: 69 LHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQ 128
+ A + L + + L D+D T LH A AG+ ++ LL VN +
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 129 DNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRV 188
D+ G S +H A G E ++ +L GA+ + + +G P+HYA+ H
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHE--------- 117
Query: 189 GLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALH 248
+ +LL + + D + AA+ G+ I L+ A+ D +G T LH
Sbjct: 118 ---IAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLH 174
Query: 249 CAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQ 298
A E + L++ GA + + + + L A G +++
Sbjct: 175 LACDEERVEEAKLLVS-QGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222
Score = 65.8 bits (159), Expect = 3e-13
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 191 AVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA 250
+ + +L D+D R + WA SAG ++ + L++ G V D G + LH A
Sbjct: 18 ELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA 77
Query: 251 ASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310
AS G E ++ L+ GA V+ ++ NGC+ L YA + + +LL+ GA P+ +D
Sbjct: 78 ASAGRDEIVKALLG-KGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYE 136
Query: 311 RTYEYQW 317
T ++
Sbjct: 137 ATAMHRA 143
Score = 65.8 bits (159), Expect = 3e-13
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 14/179 (7%)
Query: 136 VHWATVCGEVEAL-ETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLK 194
V G++E L E++L+ + + D +H+A
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL--------- 57
Query: 195 VLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRG 254
V VN D G P+ AASAG + + AL+ GA V A +++G T LH AAS+
Sbjct: 58 ---QLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN 114
Query: 255 HRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTY 313
E L+ GA+ D D +A+ A G+ +LL Y A+ N QD +G T
Sbjct: 115 RHEIAVMLLE-GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTP 172
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 98.6 bits (244), Expect = 9e-25
Identities = 49/245 (20%), Positives = 80/245 (32%), Gaps = 6/245 (2%)
Query: 66 KTVLHYCAENTILSCAETILE--VAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRA 123
T LH + + +L + ++ ++ G T LHLAAI G + L A A
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 124 NVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEP--STPDIHGGYPIHYASQMCGHASE 181
V + GH+ +H A +L D + +
Sbjct: 70 GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129
Query: 182 MGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEA-HD 240
+ + + + + DG P+ A ++ + L AGA++
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189
Query: 241 KDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300
G T LH A LE L+ GAD G + L A+ + LL +G
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248
Query: 301 ATPNR 305
A
Sbjct: 249 APEPE 253
Score = 59.3 bits (142), Expect = 8e-11
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 4/110 (3%)
Query: 204 NVVDKDGRQPILWAASAGSSDAILALVKAGAN---VEAHDKDGLTALHCAASRGHRECLE 260
V +DG + A + L+ A ++ + G TALH AA G
Sbjct: 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE-ASTV 61
Query: 261 TLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310
+ GA V V + G +AL A + +LLQ + R
Sbjct: 62 EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT 111
Score = 50.5 bits (119), Expect = 6e-08
Identities = 22/126 (17%), Positives = 41/126 (32%)
Query: 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPD 90
+Q + E + + + T LH + + + D
Sbjct: 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD 183
Query: 91 LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALET 150
L + G TPLHLA A ++ LL A+ ++ G + + A +
Sbjct: 184 LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243
Query: 151 VLSAGA 156
+ + GA
Sbjct: 244 LRAHGA 249
Score = 38.1 bits (87), Expect = 8e-04
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 273 IDTNGCSALFYAVTLGHADATTLLLQYGATP---NRQDRKGRT 312
+ +G +AL AV H LL + A + Q+ G+T
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQT 47
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 98.8 bits (245), Expect = 3e-24
Identities = 47/327 (14%), Positives = 93/327 (28%), Gaps = 41/327 (12%)
Query: 3 DVISIFLSKPNLVWENGSFDKKVHNTMEGATSLMYAAQ--QGKDAEVKAILASRPNAVRE 60
++ F+S L S+ + +H + G ++ Q A + +
Sbjct: 26 NLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHK 85
Query: 61 RDRTRKTVLHYCAEN---TILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHT 117
+ + + A + L +L ++ + Y LAA G++ +++
Sbjct: 86 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI-VKVIQAENYQAFRLAAENGHLHVLNR 144
Query: 118 LLAHRANVNSQD--NEGHSVVHWATVCGEVEALETVLSAGAEPSTPDI--HGGYPIHYAS 173
L E + A G + L + +T I Y +A+
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 204
Query: 174 QMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ-------PILWAASAGSSDAI 226
GH V+ LL V + + + P + +
Sbjct: 205 VGRGH-----------HNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 253
Query: 227 LALVKAGAN---------VEAHDKDGLTALHCAASRGHRECLETLITLCG----ADVDVI 273
A + + L L + + L+++ G A I
Sbjct: 254 DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 313
Query: 274 DTNGCSALFYAVTLGHADATTLLLQYG 300
+ L A+ LG+ A LLL
Sbjct: 314 PGDANELLRLALRLGNQGACALLLSIP 340
Score = 68.0 bits (165), Expect = 2e-13
Identities = 22/134 (16%), Positives = 32/134 (23%), Gaps = 6/134 (4%)
Query: 189 GLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDA---ILALVKAGANVEAHDKDGLT 245
+ D + AA G S A + L+ + V+ +
Sbjct: 69 YAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQ 128
Query: 246 ALHCAASRGHRECLETLITLCGADVDVIDTN--GCSALFYAVTLGHADATTLLLQYGATP 303
A AA GH L L + A A GH L + T
Sbjct: 129 AFRLAAENGHLHVLNRLCE-LAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 187
Query: 304 NRQDRKGRTYEYQW 317
+ Y
Sbjct: 188 ATAMIQAENYYAFR 201
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 95.6 bits (236), Expect = 2e-23
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 38 AAQQGKDAEVKAILASRPNAVRERDRTRK--------TVLHYCAENTILSCAETILEVAP 89
A+Q ++ ++K + S + + +K V + +LE
Sbjct: 5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA 64
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
D I A+ DG T LH A I NV ++ L+ + AN+N DNEG +H A CG ++ E
Sbjct: 65 D-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAE 123
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAV---------------LK 194
++S GA + G P+ A + R G+ + +
Sbjct: 124 YLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQ 183
Query: 195 VLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRG 254
L +++ K G + AA+ G ++ + L++A +V D DG T LH AA G
Sbjct: 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243
Query: 255 HRECLETLITLCGADVDVIDTNGCSALFYA 284
E L+ D++ ++ G +A A
Sbjct: 244 KEEACRILVE-NLCDMEAVNKVGQTAFDVA 272
Score = 75.9 bits (185), Expect = 2e-16
Identities = 58/245 (23%), Positives = 90/245 (36%), Gaps = 17/245 (6%)
Query: 23 KKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAE 82
KK + + A G EV +L + + + T LH + +
Sbjct: 32 KKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNV-DMV 89
Query: 83 TILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVC 142
L I D +G+ PLH AA G + + L++ A+V + ++EG + + A
Sbjct: 90 KFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEE 149
Query: 143 GEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVG------------- 189
E L+ ++ I S NDVR
Sbjct: 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209
Query: 190 --LAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTAL 247
VLK+L+ DVN+ D DG P+ AA G +A LV+ ++EA +K G TA
Sbjct: 210 GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269
Query: 248 HCAAS 252
A
Sbjct: 270 DVADE 274
Score = 48.6 bits (114), Expect = 3e-07
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGA 301
D A S G E + L+ GAD++ + +G +AL A + D L++ GA
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLE-RGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97
Query: 302 TPNRQDRKGRTYEYQW 317
N+ D +G +
Sbjct: 98 NINQPDNEGWIPLHAA 113
Score = 37.0 bits (84), Expect = 0.002
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 273 IDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRT 312
+ + + A + G + LL+ GA N + G T
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLT 75
Score = 33.2 bits (74), Expect = 0.038
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTI 77
+G T L AA GK+ + ++ + + + ++ +T E+ +
Sbjct: 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADEDIL 277
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 92.5 bits (228), Expect = 2e-22
Identities = 55/274 (20%), Positives = 100/274 (36%), Gaps = 13/274 (4%)
Query: 36 MYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDL---- 91
++ G A + I N + R +TVLH+ A N+ +E ++
Sbjct: 6 LHTEAAGSYAITEPITRESVNIIDPRHN--RTVLHWIASNSSAEKSEDLIVHEAKECIAA 63
Query: 92 ---IEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEAL 148
+ A D D TPL LA +A L+ L+ A+ + S +H A + +
Sbjct: 64 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMM 123
Query: 149 ETVLSAGAEPSTPDIHGGYPIHYASQMC--GHASEMGNDVRVGLAVLKVLLHHNVDVNVV 206
+L++ + + + ++ + + KV +
Sbjct: 124 VYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 183
Query: 207 DKDGRQPILWAASAGSSDAILALVK-AGANVEAHDKDGLTALHCAASRGHRECLETLITL 265
GR + +AA + + LV G+N + D+DG T + AA G E + LI
Sbjct: 184 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ- 242
Query: 266 CGADVDVIDTNGCSALFYAVTLGHADATTLLLQY 299
GA V+ +D +A A H + + +
Sbjct: 243 QGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276
Score = 80.9 bits (198), Expect = 3e-18
Identities = 43/262 (16%), Positives = 83/262 (31%), Gaps = 29/262 (11%)
Query: 69 LHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHR------ 122
LH A + + E I + ++I+ T LH A + L+ H
Sbjct: 6 LHTEAAGS-YAITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA 62
Query: 123 --ANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHAS 180
A+VN+ D + ++ + A + + + + H +
Sbjct: 63 AGADVNAMDCDENTPLMLAVLARRRR--------LVAYLMKAGADPTIYNKSERSALHQA 114
Query: 181 EMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSD----------AILALV 230
D + + +L + ++ A + G
Sbjct: 115 AANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 174
Query: 231 KAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHA 290
A ++ G TALH AA + ++ L+ G++ D D +G + + A G
Sbjct: 175 DGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 234
Query: 291 DATTLLLQYGATPNRQDRKGRT 312
+ L+Q GA+ D T
Sbjct: 235 EVVMYLIQQGASVEAVDATDHT 256
Score = 50.5 bits (119), Expect = 8e-08
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Query: 16 WENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAEN 75
+ +K +G T+L YAAQ VK ++ + + ++D KT + A+
Sbjct: 172 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 231
Query: 76 TILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHR 122
+ +++ +EA D +T LA + ++ R
Sbjct: 232 GRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCR 277
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 83.7 bits (205), Expect = 1e-19
Identities = 55/236 (23%), Positives = 80/236 (33%), Gaps = 11/236 (4%)
Query: 67 TVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVN 126
LH + +L P L+ D+DG PLH + + LL+ NVN
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 127 SQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDV 186
D S + V LE + P G
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEV-------VKSLYDRPLKPDLNKITNQGVTCLHLAVG 114
Query: 187 RVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAG-ANVEAHDKDGLT 245
+ V + L+ + V + DK + P+ AAS GS I L G + V DK G T
Sbjct: 115 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 174
Query: 246 ALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGA 301
L A + GH + L+ GA+ D++D G A A+ + L
Sbjct: 175 PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
Score = 71.8 bits (174), Expect = 3e-15
Identities = 52/214 (24%), Positives = 81/214 (37%), Gaps = 9/214 (4%)
Query: 101 TPLHLAAIAGNVPLIHTLL-AHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPS 159
PLH A + + LL + + + +D +G +HW+ E +LS +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 160 TPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAAS 219
D C + D+N + G + A
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVK-------SLYDRPLKPDLNKITNQGVTCLHLAVG 114
Query: 220 AGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCS 279
+ L++ GA+V DK LH AAS G + +E L L + V+ D G +
Sbjct: 115 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 174
Query: 280 ALFYAVTLGHADATTLLL-QYGATPNRQDRKGRT 312
LF+A+ GH DA LL+ +YGA + D KG
Sbjct: 175 PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK 208
Score = 51.7 bits (122), Expect = 2e-08
Identities = 13/73 (17%), Positives = 26/73 (35%)
Query: 245 TALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPN 304
LH A ++ L+ + + D +G L ++V+ + T+ LL N
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 305 RQDRKGRTYEYQW 317
D + +
Sbjct: 62 LDDYPDDSGWTPF 74
Score = 46.4 bits (108), Expect = 1e-06
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 4/142 (2%)
Query: 16 WENGSFDKKVHNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAEN 75
+ ++ + ++ A K EV L +VR +D+ + LH A
Sbjct: 89 LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV 148
Query: 76 TILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLL-AHRANVNSQDNEGHS 134
L E + + + D+ G+TPL A G+ L+ + A + DN+G
Sbjct: 149 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK 208
Query: 135 VVHWATVCGEVEALETVLSAGA 156
A + + L+
Sbjct: 209 AEDVAL---NEQVKKFFLNNVV 227
Score = 42.1 bits (97), Expect = 4e-05
Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 3/99 (3%)
Query: 26 HNTMEGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETIL 85
L AA G ++ + +AV +D+ T L + A ++
Sbjct: 133 IKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 192
Query: 86 EVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRAN 124
E + D G +A N + L + +
Sbjct: 193 EKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
Score = 41.7 bits (96), Expect = 5e-05
Identities = 35/231 (15%), Positives = 64/231 (27%), Gaps = 42/231 (18%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
+G L ++ +L+ N + + ++ +
Sbjct: 33 DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKS---- 88
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
+ ++N N+G + +H A E +
Sbjct: 89 --------------------------LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209
++ GA D P+H A+ + VN DK
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG-----------LGKSAVNWQDKQ 171
Query: 210 GRQPILWAASAGSSDAILALV-KAGANVEAHDKDGLTALHCAASRGHRECL 259
G P+ A + G DA + LV K GA + D G A A + ++
Sbjct: 172 GWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 222
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 82.2 bits (201), Expect = 4e-19
Identities = 53/222 (23%), Positives = 83/222 (37%), Gaps = 12/222 (5%)
Query: 98 DGYTPLHLAAIAGNVP----LIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLS 153
DG + LHLA I +I + A +N Q+N + +H A + + E E +L
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60
Query: 154 AGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQP 213
AG +P D G P+H A + AS H + + + +G
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS------CTTPHLHSILKATNYNGHTC 114
Query: 214 ILWAASAGSSDAILALVKAGANV-EAHDKDGLTALHCAASRGHRECLETLITLCGADVDV 272
+ A+ G + LV GA+V +G TALH A + + + L+ CGADV+
Sbjct: 115 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNR 173
Query: 273 IDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYE 314
+ G S L Q + + E
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 215
Score = 58.8 bits (140), Expect = 7e-11
Identities = 39/247 (15%), Positives = 70/247 (28%), Gaps = 37/247 (14%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
+G + L A + A ++ ++
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVI-------------------------------RQVKGDL 29
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
+ + TPLHLA I + LL + +D G++ +H A G + ++
Sbjct: 30 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVG 89
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209
+ + P I + AS G V L V +
Sbjct: 90 VLTQSCTTPHLHSIL-KATNYNGHTCLHLASIHGYLGIVELLV----SLGADVNAQEPCN 144
Query: 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLITLCGAD 269
GR + A + D + L+K GA+V G + R + L L +
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL-TLE 203
Query: 270 VDVIDTN 276
+
Sbjct: 204 NLQMLPE 210
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 81.8 bits (200), Expect = 6e-19
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 97 EDGYTPLHLAAIAGNVP----LIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVL 152
EDG TPLH+A + GN+P L++ ++ +N + +H A + + ++
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60
Query: 153 SAGAEPSTPDIHGGYPIHYASQMC-------------------------GHASEMGNDVR 187
+AGA P D HG H A + G +
Sbjct: 61 TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120
Query: 188 VGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAIL-ALVKAGANVEAHDKDGLTA 246
+++LL D++ VD + L A +S +++ L++ GANV A G +A
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSA 180
Query: 247 LHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHAD 291
LH A+ RG + TL+ GAD + + + + L A + D
Sbjct: 181 LHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVID 224
Score = 74.5 bits (181), Expect = 3e-16
Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 29/223 (13%)
Query: 66 KTVLHYCAENTILSCAETILEVAPDL---IEAADEDGYTPLHLAAIAGNVPLIHTLLAHR 122
T LH L ++ + ++ + TPLHLA I ++ L+
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 123 ANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEM 182
A+ + D G + H A L +L + A + Y A + +
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123
Query: 183 GNDV--------------------------RVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216
L+++++LL H +VN G +
Sbjct: 124 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHS 183
Query: 217 AASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL 259
A+ G + LV++GA+ + T L A SR + L
Sbjct: 184 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 79.1 bits (193), Expect = 5e-18
Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 12/217 (5%)
Query: 80 CAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139
+L +L D+ G T LHLAA LL A+ NSQDN G + +H A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 140 TVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHH 199
+ + A G + +++ L+
Sbjct: 64 VAADAM-----------GVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA 112
Query: 200 NVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECL 259
+ D+N D G+ + WAA+ +++A+ L+ AN +A D T L AA G E
Sbjct: 113 DADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 172
Query: 260 ETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLL 296
+ L+ A+ ++ D A H D LL
Sbjct: 173 KALLD-NFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 58.3 bits (139), Expect = 1e-10
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 114 LIHTLLAHRANVNS-QDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYA 172
+I LLA A +N+ D G + +H A +A + +L AGA+ ++ D G P+H A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 173 SQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKA 232
+ ++N DG P++ AA + L+ A
Sbjct: 64 VAADAMGVFQILLR-----------NRATNLNARMHDGTTPLILAARLAIEGMVEDLITA 112
Query: 233 GANVEAHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADA 292
A++ A D G TALH AA+ + E + L+ A+ D D + LF A G +A
Sbjct: 113 DADINAADNSGKTALHWAAAVNNTEAVNILLM-HHANRDAQDDKDETPLFLAAREGSYEA 171
Query: 293 TTLLLQYGATPNRQDRKGRT 312
+ LL A D R
Sbjct: 172 SKALLDNFANREITDHMDRL 191
Score = 55.2 bits (131), Expect = 1e-09
Identities = 50/233 (21%), Positives = 77/233 (33%), Gaps = 46/233 (19%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
G TSL AA+ A+ L +D T +T LH + + +L
Sbjct: 22 TGETSLHLAARFA-RADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRA 80
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
+ A DG TPL LAA ++ L+ A++N+ DN G + +HWA
Sbjct: 81 TNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVN------ 134
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKD 209
+ + H+ + + D
Sbjct: 135 ------------------NTEAVNILL---------------------MHHANRDAQDDK 155
Query: 210 GRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETL 262
P+ AA GS +A AL+ AN E D A+ R H + + L
Sbjct: 156 DETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 42.9 bits (99), Expect = 2e-05
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 192 VLKVLLHHNVDVNV-VDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA 250
V+ LL ++N +DK G + AA +DA L+ AGA+ + D G T LH A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 251 ASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYGATPNRQDRKG 310
+ + L+ +++ +G + L A L L+ A N D G
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123
Query: 311 RTYEYQW 317
+T +
Sbjct: 124 KTALHWA 130
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 60.6 bits (145), Expect = 6e-12
Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 15/166 (9%)
Query: 99 GYTPLHLAAIAGNVPLIHTLL-AHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAE 157
L AA G+V + LL + ++ + G + + ALE + +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 158 PSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWA 217
A ++ H DVNV D G P +
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLV-------------EHGADVNVPDGTGALP-IHL 107
Query: 218 ASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
A A+++ + A +++ D GLT L A RG ++ ++ L
Sbjct: 108 AVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 39.4 bits (90), Expect = 1e-04
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 58 VRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHT 117
V D T +H + + + + + D G TPL LA G L+
Sbjct: 94 VNVPDGTGALPIHLAVQEGHTAVVSFLAAESD--LHRRDARGLTPLELALQRGAQDLVDI 151
Query: 118 LLAH 121
L H
Sbjct: 152 LQGH 155
Score = 37.5 bits (85), Expect = 7e-04
Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 15/169 (8%)
Query: 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPD 90
L AA +G EV+ +L +R KT L + E + + A
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 91 LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALET 150
++ + + H A+VN D G +H A G +
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLV--EHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119
Query: 151 VLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHH 199
+ A ++ D G P+ A Q G ++ +L H
Sbjct: 120 LA-AESDLHRRDARGLTPLELALQ-RGA-----------QDLVDILQGH 155
Score = 36.7 bits (83), Expect = 0.001
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 245 TALHCAASRGHRECLETLITLCGADVDVIDTNGCS 279
L AA+RG + + L+ D ++ G +
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT 38
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 59.9 bits (143), Expect = 1e-11
Identities = 37/165 (22%), Positives = 55/165 (33%), Gaps = 13/165 (7%)
Query: 98 DGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAE 157
D L AA AG + L+A+ A + G S +H A G
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTD-WLGTSPLHLAAQYGH------------F 47
Query: 158 PSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWA 217
+T + A +++VLL H DVN D + WA
Sbjct: 48 STTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWA 107
Query: 218 ASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETL 262
+ + L+K GA+V K TA + G+ + E L
Sbjct: 108 TEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 35.2 bits (79), Expect = 0.004
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 30 EGATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAP 89
+ L+ AA+ G+D EV+ ++A+ + T L + + A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLR---AG 57
Query: 90 DLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALE 149
+A + TPLH+AA G+ ++ LL H A+VN++D + +HWAT E +E
Sbjct: 58 VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE 117
Query: 150 TVLSAGAEPSTPDIHGGYPIHYASQMCGH 178
++ GA+ T + G+
Sbjct: 118 LLIKYGADVHTQSKFCKTAFDISID-NGN 145
Score = 32.1 bits (71), Expect = 0.043
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 69 LHYCAENTILSCAETILEVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTL 118
LH+ E+ E +++ D + + T ++ GN L L
Sbjct: 104 LHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 30.2 bits (66), Expect = 0.20
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVD 271
D L AA G + + L+ GA
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMA-NGAPFT 29
Score = 28.3 bits (61), Expect = 0.85
Identities = 8/38 (21%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 280 ALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317
L A G D +L+ GA G + +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWL-GTSPLHLA 41
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 58.0 bits (138), Expect = 5e-11
Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 12/163 (7%)
Query: 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPST 160
L AA G++ + +LL + NVN+Q+ G + + + L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEI--ARRLLLRGANPD 60
Query: 161 PDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220
G+ + + + G + + V N+ +++ K+G ++
Sbjct: 61 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120
Query: 221 GSSDAILALVKAGANVEAHDKDGLTALHCAASRGHRECLETLI 263
++ NV + G TA A G E + +
Sbjct: 121 HTAS----------NVGHRNHKGDTACDLARLYGRNEVVSLMQ 153
Score = 45.3 bits (105), Expect = 1e-06
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 13/164 (7%)
Query: 137 HWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVL 196
A G++E L ++L + + G + +
Sbjct: 6 ASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLL------------ 53
Query: 197 LHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHR 256
+ ++ D+ G I AA AG D + L++ A+V D +G LH AA GH
Sbjct: 54 -LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHL 112
Query: 257 ECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300
+E L+ ++V + G +A A G + +L+ G
Sbjct: 113 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 36.8 bits (83), Expect = 0.001
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 279 SALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317
+ L A G + T LLQ N Q+ GRT
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM 41
Score = 34.9 bits (78), Expect = 0.005
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 92 IEAADEDGYTPLHLAAIAGNVPLIHTLLAH 121
+ + G T LA + G ++ + A+
Sbjct: 126 VGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 26.8 bits (57), Expect = 2.4
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 121 HRANVNSQDNEGHSVVHWATVCGEVEALETVLSAG 155
+NV ++++G + A + G E + + + G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 50.4 bits (119), Expect = 2e-08
Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 15/133 (11%)
Query: 137 HWATVCGEVEALETVLSAGAEPSTP------DIHGGYPIHYASQMCGHASEMGNDVRVGL 190
A ++ L + G + + +H A + S L
Sbjct: 11 CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS---------L 61
Query: 191 AVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCA 250
++ L+ ++ +++ G + + +++ + L++ A++E ++ G T L A
Sbjct: 62 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121
Query: 251 ASRGHRECLETLI 263
H C E L
Sbjct: 122 KRLKHEHCEELLT 134
Score = 44.6 bits (104), Expect = 2e-06
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 13/138 (9%)
Query: 190 LAVLKVLLHHNVDVNV------VDKDGRQPILWAASA---GSSDAILALVKAGANVEAHD 240
+ L VD+ + + A + S + LV+ N++
Sbjct: 19 IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT 78
Query: 241 KDGLTALHCAASRGHRECLETLITLCGADVDVIDTNGCSALFYAVTLGHADATTLLLQYG 300
G TALH + ECL+ L+ A +++ + +G + L A L H LL Q
Sbjct: 79 GKGSTALHYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQAL 137
Query: 301 ATPNRQDRKGRTYEYQWR 318
+ + EY+WR
Sbjct: 138 S---GRFNSHVHVEYEWR 152
Score = 40.7 bits (94), Expect = 5e-05
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 62 DRTRKTVLHYCAENTILSCAETILE-----VAPDLIEAADEDGYTPLHLAAIA---GNVP 113
+ L + + + E T LHLA + ++
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 114 LIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYAS 173
++ L+ + N++ Q +G + +H+ + E L+ +L A + G P+ A
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122
Query: 174 QMCGH 178
++ H
Sbjct: 123 RL-KH 126
Score = 39.2 bits (90), Expect = 2e-04
Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 7/142 (4%)
Query: 33 TSLMYAAQQGKDAEVKAILA-----SRPNAVRERDRTRKTVLHYCAENTILSCAETI--L 85
SL A + + A + + +T LH + + + L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 86 EVAPDLIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEV 145
++ G T LH + N + LL +A++ + G + + A
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127
Query: 146 EALETVLSAGAEPSTPDIHGGY 167
E + A + +H Y
Sbjct: 128 HCEELLTQALSGRFNSHVHVEY 149
Score = 29.2 bits (64), Expect = 0.36
Identities = 16/87 (18%), Positives = 24/87 (27%), Gaps = 11/87 (12%)
Query: 242 DGLTALHCAASRGHRECLETLITLCGADVDV--------IDTNGCSALFYAVTL---GHA 290
D LH + L+ VD+ +AL AV
Sbjct: 2 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61
Query: 291 DATTLLLQYGATPNRQDRKGRTYEYQW 317
L+Q ++Q KG T +
Sbjct: 62 HIVDFLVQNSGNLDKQTGKGSTALHYC 88
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 45.0 bits (105), Expect = 1e-06
Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 134 SVVHWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVL 193
+++ +++ GE + ++ ++ +PS P+ G +H A
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-------- 54
Query: 194 KVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHD-KDGLTA--LHCA 250
V+VN D DG P+ AAS + LV++GA V A D TA
Sbjct: 55 ----QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 110
Query: 251 ASRGHRECLETLI 263
G+ +C + L
Sbjct: 111 MEEGYTQCSQFLY 123
Score = 45.0 bits (105), Expect = 1e-06
Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 15/139 (10%)
Query: 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPST 160
L +++ G L+ ++ + + ++EG + +H A G
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH------------TEIV 50
Query: 161 PDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQ---PILWA 217
+ A+ G + V K L+ V + Q
Sbjct: 51 KFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 110
Query: 218 ASAGSSDAILALVKAGANV 236
G + L +
Sbjct: 111 MEEGYTQCSQFLYGVQEKM 129
Score = 32.7 bits (73), Expect = 0.020
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 178 HASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVE 237
+S G +++ +++ D ++ + +G + A AG ++ + LV+ G NV
Sbjct: 7 DSSLEGE-----FDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 238 AHDKDGLTALHCAASRGHRECLETLITLCGADVDVIDTNG---CSALFYAVTLGHADATT 294
A D DG T LHCAAS + + + L+ GA V + + + + G+ +
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120
Query: 295 LLLQYGA 301
L
Sbjct: 121 FLYGVQE 127
Score = 32.7 bits (73), Expect = 0.022
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 35 LMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLIEA 94
L+ ++ +G+ V+ I+ + A + L + A
Sbjct: 5 LLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 95 ADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGH---SVVHWATVCGEVEALETV 151
AD DG+TPLH AA NV + L+ A V + + G + + +
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 152 LSAGAE 157
+
Sbjct: 123 YGVQEK 128
Score = 27.7 bits (60), Expect = 0.96
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 244 LTALHCAASRGHRECLETLITLCGADVDVIDTNGC 278
L L ++ G + ++ +I D + + G
Sbjct: 2 LALLLDSSLEGEFDLVQRIIY-EVDDPSLPNDEGI 35
Score = 27.7 bits (60), Expect = 1.2
Identities = 6/39 (15%), Positives = 14/39 (35%)
Query: 279 SALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317
+ L + G D ++ P+ + +G T +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 41
Score = 26.2 bits (56), Expect = 3.5
Identities = 7/58 (12%), Positives = 14/58 (24%), Gaps = 2/58 (3%)
Query: 70 HYCAENTILSCAETILEVAPDLIEAADEDGYTPLHL--AAIAGNVPLIHTLLAHRANV 125
H A + + ++E + D T G L + +
Sbjct: 72 HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 35.7 bits (80), Expect = 0.002
Identities = 27/136 (19%), Positives = 42/136 (30%), Gaps = 12/136 (8%)
Query: 97 EDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGA 156
E L AA G V + LL AN N+ ++ G + + A +L
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 157 EPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILW 216
P+H A++ + + ++V D GR P+
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLH------------RAGARLDVRDAWGRLPVDL 108
Query: 217 AASAGSSDAILALVKA 232
A G D L A
Sbjct: 109 AEELGHRDVARYLRAA 124
Score = 33.4 bits (74), Expect = 0.010
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 137 HWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVL 196
A G VE + +L AGA P+ P+ +G PI +E+
Sbjct: 8 ATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLL----------- 56
Query: 197 LHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHR 256
H +P+ AA G D ++ L +AGA ++ D G + A GHR
Sbjct: 57 -HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHR 115
Query: 257 ECLETLI 263
+ L
Sbjct: 116 DVARYLR 122
Score = 29.2 bits (63), Expect = 0.31
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 245 TALHCAASRGHRECLETLI 263
L AA+RG E + L+
Sbjct: 5 DWLATAAARGRVEEVRALL 23
Score = 28.8 bits (62), Expect = 0.47
Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 2/124 (1%)
Query: 31 GATSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPD 90
A L AA +G+ EV+A+L A + AE +L +
Sbjct: 3 SADWLATAAARGRVEEVRALL--EAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 91 LIEAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALET 150
A P+H AA G + + L A ++ +D G V A G +
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 151 VLSA 154
+ +A
Sbjct: 121 LRAA 124
Score = 26.5 bits (56), Expect = 2.8
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 277 GCSALFYAVTLGHADATTLLLQYGATPNRQDRKGRTYEYQW 317
L A G + LL+ GA PN + GR
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM 43
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 34.5 bits (77), Expect = 0.004
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 137 HWATVCGEVEALETVLSAGAEPSTPDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVL 196
WA G+++ ++ ++ G + + G P+HYA+
Sbjct: 7 MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL----------- 55
Query: 197 LHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTALHCAASRGHR 256
D+N DK P+L A G + L+ GA+ DGLTAL ++ +
Sbjct: 56 -LKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIK 114
Query: 257 ECLE 260
L+
Sbjct: 115 ALLQ 118
Score = 29.5 bits (64), Expect = 0.21
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 16/131 (12%)
Query: 101 TPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWATVCGEVEALETVLSAGAEPST 160
A G++ + +A +VN G +H+A CG+
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQ------------LEIL 51
Query: 161 PDIHGGYPIHYASQMCGHASEMGNDVRVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASA 220
+ A + ++ +K+LL D V DG +
Sbjct: 52 EFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD-- 109
Query: 221 GSSDAILALVK 231
+ AI AL++
Sbjct: 110 --NQAIKALLQ 118
Score = 27.2 bits (58), Expect = 1.3
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Query: 33 TSLMYAAQQGKDAEVKAILASRPNAVRERDRTRKTVLHYCAENTILSCAETILEVAPDLI 92
M+A + G EVK +A + R + RK + + + L + I
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQL--EILEFLLLKGADI 61
Query: 93 EAADEDGYTPLHLAAIAGNVPLIHTLLAHRANVNSQDNEGHSVVHWA 139
A D+ TPL A G+V + LL+ A+ + +G + +
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT 108
Score = 26.0 bits (55), Expect = 3.9
Identities = 2/19 (10%), Positives = 6/19 (31%)
Query: 245 TALHCAASRGHRECLETLI 263
A G + ++ +
Sbjct: 4 KEFMWALKNGDLDEVKDYV 22
Score = 24.9 bits (52), Expect = 9.2
Identities = 4/14 (28%), Positives = 4/14 (28%)
Query: 94 AADEDGYTPLHLAA 107
DG T L
Sbjct: 96 VKGPDGLTALEATD 109
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS)
{Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Length = 268
Score = 27.1 bits (59), Expect = 2.7
Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 5/40 (12%)
Query: 200 NVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAH 239
++ G + + G SD ++A + + H
Sbjct: 231 TFEIIFETPTGDKDYAYQTCYGISDRVIASI-----IAIH 265
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS)
{Arhaeon (Methanothermobacter thermautotrophicus)
[TaxId: 145262]}
Length = 265
Score = 26.8 bits (58), Expect = 3.5
Identities = 5/41 (12%), Positives = 14/41 (34%), Gaps = 5/41 (12%)
Query: 202 DVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKD 242
++ +G + G SD ++ + + H +
Sbjct: 230 EIKFETPEGDHEYVHQTCYGLSDRVI-----ASVIAIHGDE 265
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 26.5 bits (57), Expect = 3.6
Identities = 15/87 (17%), Positives = 24/87 (27%)
Query: 187 RVGLAVLKVLLHHNVDVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKDGLTA 246
V L VL + V V + +A S I V A ++A
Sbjct: 12 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLV 71
Query: 247 LHCAASRGHRECLETLITLCGADVDVI 273
+ H +++ I V
Sbjct: 72 ISLIPYTFHATVIKSAIRQKKHVVTTS 98
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus
thermophilus [TaxId: 274]}
Length = 272
Score = 25.6 bits (55), Expect = 9.2
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Query: 202 DVNVVDKDGRQPILWAASAGSSDAILALVKAGANVEAHDKD 242
D+ D+D + + S G S + + + H D
Sbjct: 237 DIKFQDRDLQVKYVHTTSWGLSWRFIGAI-----IMTHGDD 272
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.393
Gapped
Lambda K H
0.267 0.0495 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,120,565
Number of extensions: 47534
Number of successful extensions: 514
Number of sequences better than 10.0: 1
Number of HSP's gapped: 284
Number of HSP's successfully gapped: 115
Length of query: 321
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 236
Effective length of database: 1,240,546
Effective search space: 292768856
Effective search space used: 292768856
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.8 bits)