RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13806
         (97 letters)



>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
           discoideum, class-I myosin MyoE [TaxId: 44689]}
          Length = 684

 Score = 72.0 bits (176), Expect = 6e-17
 Identities = 31/65 (47%), Positives = 44/65 (67%)

Query: 25  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 84
           FEQL IN+ NE LQ  F +   + EQEEY +EGI W++IE+ +N    +L+E KP GL+ 
Sbjct: 390 FEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLIS 449

Query: 85  VLDDQ 89
           +LD+ 
Sbjct: 450 LLDEA 454


>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
           (Gallus gallus), pectoral muscle [TaxId: 9031]}
          Length = 794

 Score = 68.6 bits (167), Expect = 9e-16
 Identities = 31/68 (45%), Positives = 42/68 (61%)

Query: 25  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 84
           FEQLCIN+ NE LQ +FN H+F  EQEEY KEGI W  I+F  +      +  KP G+  
Sbjct: 426 FEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFS 485

Query: 85  VLDDQAKQ 92
           +L+++   
Sbjct: 486 ILEEECMF 493


>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
           scallop (Aequipecten irradians) [TaxId: 31199]}
          Length = 789

 Score = 67.0 bits (163), Expect = 3e-15
 Identities = 33/65 (50%), Positives = 43/65 (66%)

Query: 25  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 84
           FEQLCINY NE LQ +FN H+F  EQEEY KEGI W  I+F  +      +  KP G+L 
Sbjct: 424 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILS 483

Query: 85  VLDDQ 89
           +L+++
Sbjct: 484 ILEEE 488


>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
           (Gallus gallus), pectoral muscle [TaxId: 9031]}
          Length = 710

 Score = 65.9 bits (160), Expect = 8e-15
 Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 3/68 (4%)

Query: 25  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEG--KPNG 81
           FEQLCINY NE LQ  FN  +F  EQEEY +EGI W  I+F  D   C++L+E    P G
Sbjct: 398 FEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPG 457

Query: 82  LLCVLDDQ 89
           +L +LD++
Sbjct: 458 VLALLDEE 465


>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
           (Gallus gallus), Va isoform [TaxId: 9031]}
          Length = 730

 Score = 65.5 bits (159), Expect = 1e-14
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 11/99 (11%)

Query: 1   MVGFEPDLLHASKRINTRPTVSDFF----------EQLCINYANEHLQYYFNQHVFQYEQ 50
           +V      LH++ + ++   V D +          EQ CINYANE LQ  FN HVF+ EQ
Sbjct: 353 IVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 412

Query: 51  EEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 89
           EEY KE I W  I+F DN  C+ L+E K  G+L +LD++
Sbjct: 413 EEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEE 450


>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
           {Dictyostelium discoideum [TaxId: 44689]}
          Length = 712

 Score = 61.6 bits (149), Expect = 3e-13
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)

Query: 25  FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGL 82
           FEQLCINY NE LQ +FN H+F+ EQEEY KE I W  I+F  D+   + L++G +P G+
Sbjct: 419 FEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGI 478

Query: 83  LCVLDDQ 89
           L +LD+Q
Sbjct: 479 LALLDEQ 485


>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
          Length = 476

 Score = 24.5 bits (53), Expect = 2.8
 Identities = 8/39 (20%), Positives = 10/39 (25%)

Query: 30  INYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDN 68
           I Y       +  Q  F+            W H E  D 
Sbjct: 377 ITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDY 415


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.140    0.452 

Gapped
Lambda     K      H
   0.267   0.0521    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 376,714
Number of extensions: 15377
Number of successful extensions: 54
Number of sequences better than 10.0: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 14
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.4 bits)