BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13808
(190 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157106378|ref|XP_001649296.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868852|gb|EAT33077.1| AAEL014664-PA [Aedes aegypti]
Length = 586
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%)
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
G+NIQFTSGTTG PKAAF++HY +NN+ IG R EFD DH+I +Q P FH FG +GI
Sbjct: 227 GVNIQFTSGTTGQPKAAFMSHYGFVNNAIHIGHRNEFDLKDHRICVQTPFFHVFGIVIGI 286
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ AM++G+T V+P P FK +SL IAKEKC
Sbjct: 287 VGAMSYGTTLVLPGPGFKASESLETIAKEKC 317
>gi|268561680|ref|XP_002638388.1| C. briggsae CBR-ACS-2 protein [Caenorhabditis briggsae]
Length = 618
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 80/122 (65%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD+M AG E + E++ + L + +N+QFTSGTTGHPK A LTH+ L NN+
Sbjct: 216 GAWVYSDLMNAAGTEERAKLEEMDRKLRPDEPVNMQFTSGTTGHPKGATLTHFGLNNNAY 275
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F G RL +D+ DH+I + P++H FG A+G++NA+NHG T + P+ S+ D AI E
Sbjct: 276 FAGIRLGWDRDDHRICIPNPLYHCFGCAVGVINAVNHGQTVIFPSKSYHVPDIFEAIQNE 335
Query: 182 KC 183
KC
Sbjct: 336 KC 337
>gi|341889395|gb|EGT45330.1| hypothetical protein CAEBREN_26030 [Caenorhabditis brenneri]
Length = 578
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD+M AG E + E + + L + +N+QFTSGTTGHPK A LTH+ L NN+
Sbjct: 215 GAWVYSDLMNAAGTEERAKLEDMDRKLRPDEPVNMQFTSGTTGHPKGATLTHFGLNNNAY 274
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F G RL +D+ DH+I + P++H FG A+G++NA+NHG T + P+ S+ D AI E
Sbjct: 275 FAGIRLGWDREDHRICIPNPLYHCFGCAVGVINAVNHGQTVIFPSKSYHVPDIFEAIQNE 334
Query: 182 KC 183
KC
Sbjct: 335 KC 336
>gi|157130154|ref|XP_001661845.1| AMP dependent coa ligase [Aedes aegypti]
gi|108872001|gb|EAT36226.1| AAEL011676-PA [Aedes aegypti]
Length = 1017
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
G+NIQFTSGTTG PKAAF++HY +NN+ IG R EFD +H+I +Q P FH FG +GI
Sbjct: 258 GVNIQFTSGTTGQPKAAFMSHYGFVNNAIHIGHRNEFDLKEHRICVQTPFFHVFGIVIGI 317
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ AM++G+T V+P P FK +SL IAKEKC
Sbjct: 318 VGAMSYGTTLVLPGPGFKASESLETIAKEKC 348
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT D++Q + E + S++ G+N+QFTSGTTG PKAA +TH INN+
Sbjct: 629 GTISYRDMLQLPTEQNISAIEPLQSSISPDSGLNMQFTSGTTGLPKAALVTHNGFINNAI 688
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ R EFD H+I LQ+P+FH F +G+L A +G+T V+P +KPM+S+ AI KE
Sbjct: 689 HLAHRNEFDVKQHRICLQLPLFHAFAMVVGVLTAFTYGTTIVLPGARYKPMESIEAIIKE 748
Query: 182 KC 183
KC
Sbjct: 749 KC 750
>gi|170028427|ref|XP_001842097.1| AMP dependent coa ligase [Culex quinquefasciatus]
gi|167874252|gb|EDS37635.1| AMP dependent coa ligase [Culex quinquefasciatus]
Length = 582
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/122 (46%), Positives = 78/122 (63%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT + D+ + E + E + ++ G+NIQFTSGTTG PKAA ++HY +NN
Sbjct: 198 GTVQYQDLFTLSSSEDQSKIESLQSQISPDSGVNIQFTSGTTGQPKAALMSHYGFVNNGI 257
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG R EF+ DH+I +Q P FH FG +GI+ AM++G+T V+P P FK +SL AI KE
Sbjct: 258 HIGFRNEFNLKDHRICVQTPFFHVFGMVIGIVAAMSYGTTLVLPGPGFKVAESLEAIDKE 317
Query: 182 KC 183
KC
Sbjct: 318 KC 319
>gi|308507281|ref|XP_003115823.1| CRE-ACS-2 protein [Caenorhabditis remanei]
gi|308256358|gb|EFP00311.1| CRE-ACS-2 protein [Caenorhabditis remanei]
Length = 618
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 80/122 (65%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD+M+ AG + + E + + L + +N+QFTSGTTGHPK A LTH+ L NN+
Sbjct: 216 GAWVYSDLMKAAGTDERAKLEDMDRKLRPDEPVNMQFTSGTTGHPKGATLTHFGLNNNAY 275
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F G RL +D+ DH+I + P++H FG A+G++NA+NHG T + P+ S+ D AI E
Sbjct: 276 FAGIRLGWDREDHRICIPNPLYHCFGCAVGVINAVNHGQTVIFPSKSYHVPDIFEAIQNE 335
Query: 182 KC 183
+C
Sbjct: 336 RC 337
>gi|328712423|ref|XP_001947925.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 580
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 80/122 (65%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + D+ Q + ++I++ LN NIQFTSGTTG PK A LTH N++NNS
Sbjct: 188 GVIKYWDVCQSGTIKSTSYLKKINRELNPHAICNIQFTSGTTGAPKGACLTHNNVVNNSY 247
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F KR+ + +H+ILLQVP FHTFGT +GI+ ++N GS ++PA +KP++S RAI E
Sbjct: 248 FYSKRMLLMEKEHRILLQVPFFHTFGTVVGIMASLNSGSALILPAFGYKPIESARAILAE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
>gi|17560308|ref|NP_506869.1| Protein ACS-2 [Caenorhabditis elegans]
gi|3876464|emb|CAB03012.1| Protein ACS-2 [Caenorhabditis elegans]
Length = 618
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD++ AG + E + + L + +N+QFTSGTTGHPK A LTH+ L NN+
Sbjct: 216 GAWVYSDLIHAAGSAERAKLEDMDRKLRPDEPVNMQFTSGTTGHPKGATLTHFGLNNNAY 275
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F G RL +D+ DH+I + P++H FG A+G++NA+NHG T V P+ S+ D AI E
Sbjct: 276 FAGIRLGWDREDHRICIPNPLYHCFGCAVGVINAVNHGQTVVFPSKSYHVPDIFEAIQNE 335
Query: 182 KC 183
KC
Sbjct: 336 KC 337
>gi|13475770|ref|NP_107337.1| AMP-binding protein [Mesorhizobium loti MAFF303099]
gi|14026526|dbj|BAB53123.1| long chain fatty acid acyl-CoA ligase [Mesorhizobium loti
MAFF303099]
Length = 590
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P KA LP ++ +RMG F +D++ AG + H ++IS+ L D IN
Sbjct: 176 PGKLKAQKLPA--LKIVIRMGEDNSPGMFNFADVLAMAGRDEHDSLDRISEGLKPGDAIN 233
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH+N++NN NF+ ++ D ++ + VP++H FG +MG +
Sbjct: 234 IQFTSGTTGAPKGATLTHHNIVNNGNFVTSAIKL-TVDDRLCIPVPLYHCFGMSMGTMGC 292
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+T V P F P +L+A+A+E+C
Sbjct: 293 VTKGATMVFPGEGFDPGATLKAVAQERC 320
>gi|198418450|ref|XP_002124320.1| PREDICTED: similar to acyl-CoA synthetase family member 2 [Ciona
intestinalis]
Length = 610
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT+R SD+M GP+ + SL D INIQFTSGTTGHPK A LTH+N+INN+
Sbjct: 226 GTYRFSDVMNAGGPKEIAQVHNCQSSLQMDDPINIQFTSGTTGHPKGATLTHHNIINNAL 285
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG R+ FD ++L QVP++H FG G L +G T V + P S+R + E
Sbjct: 286 LIGNRIGFDDDHDRVLCQVPLYHCFGMVAGTLCMAVYGQTMVFAVAGYDPAASVRTLIAE 345
Query: 182 KC 183
C
Sbjct: 346 NC 347
>gi|390337056|ref|XP_796724.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 794
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 79/121 (65%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF D+M ++ + E++ L +NIQFTSGTTG PK A LTH+N++NNS
Sbjct: 229 GTFSFDDVMDMGKEDHFKHIEKMKSVLQFDQPVNIQFTSGTTGKPKGATLTHHNIVNNSY 288
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG L++ + +H+I + VP++H FG G L AM HG+T V P+PSF+P SL+ I +E
Sbjct: 289 FIGAVLKYHEQEHRIGVPVPLYHCFGMVGGSLCAMVHGNTCVFPSPSFEPEASLKGIQEE 348
Query: 182 K 182
+
Sbjct: 349 R 349
>gi|433773982|ref|YP_007304449.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
gi|433665997|gb|AGB45073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
Length = 590
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P KA LP R+ +RMG F D++ AG + H ++IS+ L D IN
Sbjct: 176 PGKLKAAKLPA--LRIVIRMGEENSPGMFNFGDVLAMAGRDEHDSLDRISEGLKPGDAIN 233
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN NF+ ++ D ++ + VP++H FG +MG +
Sbjct: 234 IQFTSGTTGAPKGATLTHLNIVNNGNFVTSAIKL-TVDDRLCIPVPLYHCFGMSMGTMGC 292
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+T V P F P +L+AIA+E+C
Sbjct: 293 VSKGATMVFPCEGFDPGLTLKAIARERC 320
>gi|383850423|ref|XP_003700795.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Megachile rotundata]
Length = 544
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT R D+ A R ++CR+G NIQFTSGTTG PKAA L+H+ L+NN+
Sbjct: 153 GTHRFKDVENLASRIEVERVAGQQNEISCREGTNIQFTSGTTGKPKAALLSHWALVNNAR 212
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
KR +F+ HK L VP FH FG G+L+++N G T V+PAPSF P+ SL AI E
Sbjct: 213 QAAKRSQFE-VGHKACLSVPFFHAFGIIKGVLSSLNAGITLVLPAPSFNPVKSLDAIVGE 271
Query: 182 KC 183
KC
Sbjct: 272 KC 273
>gi|424060277|ref|ZP_17797768.1| hypothetical protein W9K_01391 [Acinetobacter baumannii Ab33333]
gi|404668229|gb|EKB36138.1| hypothetical protein W9K_01391 [Acinetobacter baumannii Ab33333]
Length = 564
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F PM++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPMETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|157106384|ref|XP_001649299.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868855|gb|EAT33080.1| AAEL014662-PA [Aedes aegypti]
Length = 597
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 34 PGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
PG+ + + + K + T+ +L GT L+D++Q A E + E + ++ G
Sbjct: 185 PGKLKSSKVPSLKMVIVDTESKKLP---GTMTLNDMLQMASEEEISKIESLQPGISPDSG 241
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+ FTSGTTG PKAA L+H+ L+NN RLE D H+I LQVP+FH FG ++G++
Sbjct: 242 AALLFTSGTTGQPKAALLSHFGLVNNGTHSANRLELDCKPHRICLQVPLFHVFGMSLGLM 301
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ N+GS V P+ F+ + SL+AI +EKC
Sbjct: 302 ASFNYGSALVFPSAGFQAIASLKAIVEEKC 331
>gi|158293300|ref|XP_314666.4| AGAP008557-PA [Anopheles gambiae str. PEST]
gi|157016639|gb|EAA10067.4| AGAP008557-PA [Anopheles gambiae str. PEST]
Length = 594
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLALRM-----GTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92
++ +P K+ ALP +L+ + + G + S++ + + + E + +
Sbjct: 182 ASSKPGELKSKALP-ELSAVIIDSQKSLPGAIKFSELFEVPSEQAISKIEMLQSKIMPDS 240
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
G+N+QFTSGTTGHPKAA ++H+ +NN IG R E D+ H++ +QVP+FH FG + I
Sbjct: 241 GVNLQFTSGTTGHPKAALMSHFGFVNNGLHIGNRNEMDQRMHRLCVQVPLFHAFGMVIAI 300
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ A+++GST V+P FK DSL AI +E+C
Sbjct: 301 MAALSYGSTLVLPTAGFKAADSLAAIVRERC 331
>gi|169796332|ref|YP_001714125.1| AMP-dependent synthetase and ligase [Acinetobacter baumannii AYE]
gi|213156932|ref|YP_002318977.1| long-chain fatty acid CoA ligase (AMP-binding) [Acinetobacter
baumannii AB0057]
gi|215483793|ref|YP_002326018.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|301347075|ref|ZP_07227816.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB056]
gi|301511211|ref|ZP_07236448.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB058]
gi|301595037|ref|ZP_07240045.1| AMP-binding enzyme family protein [Acinetobacter baumannii AB059]
gi|332852012|ref|ZP_08433879.1| AMP-binding enzyme [Acinetobacter baumannii 6013150]
gi|332871765|ref|ZP_08440205.1| AMP-binding enzyme [Acinetobacter baumannii 6013113]
gi|417572810|ref|ZP_12223664.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|421623504|ref|ZP_16064388.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|421645343|ref|ZP_16085811.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|421645501|ref|ZP_16085966.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|421660634|ref|ZP_16100823.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|421701018|ref|ZP_16140528.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|421797628|ref|ZP_16233669.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|421799823|ref|ZP_16235813.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
gi|169149259|emb|CAM87142.1| conserved hypothetical protein; putative AMP-dependent synthetase
and ligase [Acinetobacter baumannii AYE]
gi|213056092|gb|ACJ40994.1| long-chain fatty-acid-CoA ligase [Acinetobacter baumannii AB0057]
gi|213988634|gb|ACJ58933.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|332729589|gb|EGJ60927.1| AMP-binding enzyme [Acinetobacter baumannii 6013150]
gi|332731235|gb|EGJ62533.1| AMP-binding enzyme [Acinetobacter baumannii 6013113]
gi|400208378|gb|EJO39348.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|404568616|gb|EKA73714.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|408503184|gb|EKK04960.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|408518373|gb|EKK19898.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|408692854|gb|EKL38467.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|408704129|gb|EKL49503.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|410396557|gb|EKP48824.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|410409364|gb|EKP61297.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
Length = 564
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L M HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACMTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|403183212|gb|EJY57933.1| AAEL017299-PA [Aedes aegypti]
Length = 894
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 34 PGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
PG+ + + + K + T+ +L GT L+D++Q A E + E + ++ G
Sbjct: 481 PGKLKSSKVPSLKMVIVDTESKKLP---GTMTLNDMLQMASEEEISKIESLQPGISPDSG 537
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+ FTSGTTG PKAA L+H+ L+NN RLE D H+I LQVP+FH FG ++G++
Sbjct: 538 AALLFTSGTTGQPKAALLSHFGLVNNGMHSANRLELDCKPHRICLQVPLFHVFGMSLGLM 597
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ N+GS V P+ F+ + SL+AI +EKC
Sbjct: 598 ASFNYGSALVFPSAGFQAIASLKAIVEEKC 627
>gi|260554162|ref|ZP_05826421.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|424056019|ref|ZP_17793540.1| hypothetical protein W9I_02389 [Acinetobacter nosocomialis Ab22222]
gi|425741108|ref|ZP_18859266.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
gi|260404704|gb|EEW98215.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|407441645|gb|EKF48149.1| hypothetical protein W9I_02389 [Acinetobacter nosocomialis Ab22222]
gi|425493594|gb|EKU59825.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLVTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTAQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|445456697|ref|ZP_21446033.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
gi|444777613|gb|ELX01638.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|421653189|ref|ZP_16093530.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|425751049|ref|ZP_18869003.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|408503426|gb|EKK05196.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|425484834|gb|EKU51234.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|421674237|ref|ZP_16114169.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
gi|421693149|ref|ZP_16132792.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|404558298|gb|EKA63581.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|410384467|gb|EKP36975.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|417544715|ref|ZP_12195801.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|421665621|ref|ZP_16105728.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|421671445|ref|ZP_16111418.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|400382603|gb|EJP41281.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|410382168|gb|EKP34723.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|410389887|gb|EKP42297.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|421790190|ref|ZP_16226419.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|421808775|ref|ZP_16244617.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
gi|410395482|gb|EKP47777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|410415326|gb|EKP67116.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|445400393|ref|ZP_21429951.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
gi|444783301|gb|ELX07161.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIHLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|445449054|ref|ZP_21444146.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
gi|444757264|gb|ELW81792.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
Length = 564
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|408826805|ref|ZP_11211695.1| AMP-binding domain protein [Streptomyces somaliensis DSM 40738]
Length = 541
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 43 SAYKADALPTKLTRLALRMGTFRLSDIMQGA--------GPEYHRRREQISKSLNCRDGI 94
S Y+A + R ALR T + D GA G RE + L+C D +
Sbjct: 133 SDYRALVEEVRAGRTALRE-TVHIGDASWGALIARAASVGAAEPAAREAL---LSCDDPV 188
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I L VP +H FG MG L
Sbjct: 189 NIQYTSGTTGFPKGATLSHHNILNNGFFVGEALGYTEED-RICLPVPFYHCFGMVMGNLA 247
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A++HG+ V+PAPSF P +LRA+ +E+C
Sbjct: 248 AVSHGACIVIPAPSFDPAATLRAVQQERC 276
>gi|421456103|ref|ZP_15905446.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
gi|400211201|gb|EJO42164.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
Length = 326
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|86136427|ref|ZP_01055006.1| acyl-CoA synthase [Roseobacter sp. MED193]
gi|85827301|gb|EAQ47497.1| acyl-CoA synthase [Roseobacter sp. MED193]
Length = 590
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + GP R QI K+LN D INIQFTSGTTG PK A L+HYN++NN+
Sbjct: 200 GVYSFKQLQSLGGPAQQLRLTQIDKTLNPDDAINIQFTSGTTGSPKGATLSHYNIVNNAR 259
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ R+ +TD ++ + VP++H FG MG+L ++ G+ V P +F+ +L A+A+E
Sbjct: 260 FVTDRIALTETD-RLAIPVPLYHCFGMVMGVLGTVSKGAAMVFPGEAFEAESTLDALAEE 318
Query: 182 KC 183
+C
Sbjct: 319 RC 320
>gi|440699134|ref|ZP_20881436.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
gi|440278386|gb|ELP66431.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
Length = 527
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ + VP +H FG
Sbjct: 170 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGESISYTEQD-RVCVPVPFYHCFG 228
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF+P +LRA+A+E+C
Sbjct: 229 MVMGNLAATSHGACVVIPAPSFEPAATLRAVAEERC 264
>gi|417553099|ref|ZP_12204169.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|417563359|ref|ZP_12214238.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|421197924|ref|ZP_15655093.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|421633016|ref|ZP_16073659.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|421805439|ref|ZP_16241326.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
gi|395525941|gb|EJG14030.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|395566430|gb|EJG28073.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|400393358|gb|EJP60404.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|408707735|gb|EKL53018.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|410408948|gb|EKP60890.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
Length = 564
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|184157733|ref|YP_001846072.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|239503655|ref|ZP_04662965.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB900]
gi|260555401|ref|ZP_05827622.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332876416|ref|ZP_08444185.1| AMP-binding enzyme [Acinetobacter baumannii 6014059]
gi|384142819|ref|YP_005525529.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385237129|ref|YP_005798468.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124310|ref|YP_006290192.1| acyl-CoA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932449|ref|YP_006848092.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TYTH-1]
gi|416148012|ref|ZP_11602137.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB210]
gi|417547883|ref|ZP_12198965.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|417564311|ref|ZP_12215185.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|417568188|ref|ZP_12219051.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|417579032|ref|ZP_12229865.1| AMP-binding domain protein [Acinetobacter baumannii Naval-17]
gi|417869652|ref|ZP_12514635.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH1]
gi|417873111|ref|ZP_12517990.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH2]
gi|417878755|ref|ZP_12523356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH3]
gi|417881601|ref|ZP_12525916.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH4]
gi|421204774|ref|ZP_15661891.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC12]
gi|421534889|ref|ZP_15981157.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC30]
gi|421627657|ref|ZP_16068462.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|421679272|ref|ZP_16119150.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|421687284|ref|ZP_16127013.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|421703258|ref|ZP_16142724.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|421706981|ref|ZP_16146383.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|421791721|ref|ZP_16227892.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|424052743|ref|ZP_17790275.1| hypothetical protein W9G_01432 [Acinetobacter baumannii Ab11111]
gi|424064226|ref|ZP_17801711.1| hypothetical protein W9M_01509 [Acinetobacter baumannii Ab44444]
gi|425753305|ref|ZP_18871194.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|445471727|ref|ZP_21452264.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|445485098|ref|ZP_21456975.1| AMP-binding enzyme [Acinetobacter baumannii Naval-78]
gi|183209327|gb|ACC56725.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|193077047|gb|ABO11806.2| putative long chain fatty-acid CoA ligase [Acinetobacter baumannii
ATCC 17978]
gi|260411943|gb|EEX05240.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|323517626|gb|ADX92007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TCDC-AB0715]
gi|332735426|gb|EGJ66484.1| AMP-binding enzyme [Acinetobacter baumannii 6014059]
gi|333365280|gb|EGK47294.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AB210]
gi|342229904|gb|EGT94752.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH1]
gi|342231671|gb|EGT96474.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH3]
gi|342232158|gb|EGT96941.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH2]
gi|342238788|gb|EGU03214.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ABNIH4]
gi|347593312|gb|AEP06033.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385878802|gb|AFI95897.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-TJ]
gi|395554483|gb|EJG20485.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|395556067|gb|EJG22068.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|395568170|gb|EJG28844.1| AMP-binding domain protein [Acinetobacter baumannii Naval-17]
gi|398325762|gb|EJN41923.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC12]
gi|400389632|gb|EJP52703.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|404566131|gb|EKA71293.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|404671088|gb|EKB38949.1| hypothetical protein W9G_01432 [Acinetobacter baumannii Ab11111]
gi|404673320|gb|EKB41112.1| hypothetical protein W9M_01509 [Acinetobacter baumannii Ab44444]
gi|407192751|gb|EKE63927.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|407193115|gb|EKE64286.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|407901030|gb|AFU37861.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii TYTH-1]
gi|408711043|gb|EKL56262.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|409987226|gb|EKO43411.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii AC30]
gi|410391504|gb|EKP43872.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|410402412|gb|EKP54530.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|425498275|gb|EKU64359.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|444767322|gb|ELW91574.1| AMP-binding enzyme [Acinetobacter baumannii Naval-78]
gi|444770987|gb|ELW95123.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|452953582|gb|EME59001.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MSP4-16]
Length = 564
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|291436418|ref|ZP_06575808.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339313|gb|EFE66269.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 541
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Query: 69 IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE 128
+ GA R E I+ L+C D +NIQ+TSGTTG PK A L+H+N++NN ++G+ +
Sbjct: 165 LTAGAATVPQERVEAIAAGLSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYWVGRTIG 224
Query: 129 FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + D ++ L VP +H FG MG L A +HG+ V+PAPSF P +L A+ +E+C
Sbjct: 225 YTEQD-RVCLPVPFYHCFGMVMGNLAATSHGACIVIPAPSFDPEATLEAVQRERC 278
>gi|445490901|ref|ZP_21459385.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
gi|444764999|gb|ELW89303.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
Length = 564
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|421654949|ref|ZP_16095274.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|408509703|gb|EKK11373.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
Length = 564
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|421626707|ref|ZP_16067535.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
gi|408695024|gb|EKL40583.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
Length = 564
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|384131820|ref|YP_005514432.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii 1656-2]
gi|322508040|gb|ADX03494.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii 1656-2]
Length = 564
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|337267218|ref|YP_004611273.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
gi|336027528|gb|AEH87179.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
Length = 590
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P KA LP ++ +RMG F D++ AG + H ++IS+ L D IN
Sbjct: 176 PGKLKAQKLPA--LKIVIRMGEENSPGMFNFGDVLAMAGRDEHDSLDRISEGLKPGDAIN 233
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN NF+ ++ D ++ + VP++H FG +MG +
Sbjct: 234 IQFTSGTTGAPKGATLTHSNIVNNGNFVTSAIKL-SVDDRLCIPVPLYHCFGMSMGTMGC 292
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+T V P F +L+A+A+E+C
Sbjct: 293 VSKGATMVFPGEGFDAGATLKAVAQERC 320
>gi|421664806|ref|ZP_16104942.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|421694439|ref|ZP_16134061.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|404567901|gb|EKA73014.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|408711977|gb|EKL57169.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
Length = 564
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|126641424|ref|YP_001084408.1| long chain fatty-acid CoA ligase [Acinetobacter baumannii ATCC
17978]
Length = 482
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 92 GIYRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 151
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 152 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 210
Query: 182 KC 183
+C
Sbjct: 211 RC 212
>gi|289768167|ref|ZP_06527545.1| acyl-CoA synthetase [Streptomyces lividans TK24]
gi|289698366|gb|EFD65795.1| acyl-CoA synthetase [Streptomyces lividans TK24]
Length = 541
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +G + GA R + ++ L+C D +NIQ+TSGTTG PK A L+H+N
Sbjct: 151 RETVYIGDPSWDALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFPKGATLSHHN 210
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN ++G+ + + + D ++ L VP +H FG MG L A +HG+ V+PAPSF+P +L
Sbjct: 211 ILNNGYWVGRTVGYTEQD-RVCLPVPFYHCFGMVMGNLGATSHGACIVIPAPSFEPAATL 269
Query: 176 RAIAKEKC 183
A+ +E+C
Sbjct: 270 EAVQRERC 277
>gi|189240709|ref|XP_001813711.1| PREDICTED: similar to CG12512 CG12512-PA [Tribolium castaneum]
gi|270013541|gb|EFA09989.1| hypothetical protein TcasGA2_TC012154 [Tribolium castaneum]
Length = 575
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
Query: 41 RPSAYKADALPTKLTRLAL----RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINI 96
P K+ +P+ T + + + G F +I+ A + + + + ++ N+
Sbjct: 170 EPGKLKSGKVPSLQTVITMSENKKRGAFNFGEILDLATNDSIAQIRKYQRDISPDGPCNL 229
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PKAA +H+N++NN IGKR E ++ H I LQVP FH FGT + I+ A+
Sbjct: 230 QFTSGTTGKPKAALTSHFNMVNNGYLIGKRNELNRKHHTICLQVPFFHAFGTTISIMAAL 289
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
NHG+T V+P + P SL AI +EKC
Sbjct: 290 NHGATMVLPTDGYSPDKSLDAIKEEKC 316
>gi|47204854|emb|CAF92083.1| unnamed protein product [Tetraodon nigroviridis]
Length = 539
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + D+MQ A + R + L+C D INIQFTSGTTG PK A L+H+N++NN+
Sbjct: 118 GMLHVDDVMQAAESRHRRELLDLQSKLSCDDPINIQFTSGTTGSPKGATLSHHNIVNNAY 177
Query: 122 FIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R +D + +I +QVPM+H FG+ +G +N HG T V P+ + +L AI K
Sbjct: 178 FIGLRSGYDSRPQTRICMQVPMYHCFGSVVGGVNMAVHGVTLVFPSQGYNCQANLEAIQK 237
Query: 181 EKC 183
EKC
Sbjct: 238 EKC 240
>gi|195576736|ref|XP_002078230.1| GD22652 [Drosophila simulans]
gi|194190239|gb|EDX03815.1| GD22652 [Drosophila simulans]
Length = 593
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + AG +I KS+ NIQFTSGTTG+PKAA LTH+N +NN
Sbjct: 201 GALRFDDFLDLAGKSEREEVTKIQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E +I +QVPMFH FG + I+ A+ G+T V+PA F P DSL+AI E
Sbjct: 261 HVGNRNELQ--GERICVQVPMFHAFGVIITIMAALTKGATMVLPAAGFSPKDSLQAIVNE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|329940648|ref|ZP_08289929.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
gi|329300709|gb|EGG44606.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
Length = 548
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R I L+C D INIQ+TSGTTG PK A L+H+N++NN ++G+ + + + D ++ L
Sbjct: 178 RPAAIGAGLSCDDPINIQYTSGTTGFPKGATLSHHNILNNGFWVGRTIGYTEQD-RVCLP 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAPSF+P +LRA+ E+C
Sbjct: 237 VPFYHCFGMVMGNLGATSHGACIVIPAPSFEPAATLRAVQSERC 280
>gi|271966242|ref|YP_003340438.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270509417|gb|ACZ87695.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 530
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 77/109 (70%), Gaps = 3/109 (2%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
PE R RE+++ SL+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + +D+ D
Sbjct: 159 PE-ERLRERMA-SLSADDAINIQYTSGTTGFPKGATLSHHNILNNGFFVGELIHYDEHD- 215
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ L VP +H FG MG L A +HG+ V+PAP F P +LRA+ +E+C
Sbjct: 216 RVCLPVPFYHCFGMVMGNLGATSHGACVVIPAPGFDPEATLRAVQQERC 264
>gi|326931026|ref|XP_003211637.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Meleagris gallopavo]
Length = 604
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
N P K+ LP T + L GTF + ++MQ + ++ + ++L+C + +N
Sbjct: 188 NSSPGGIKSKRLPDLSTVIMLDSKLPGTFHMDEVMQAGDSSHMKQLRALQQTLSCNEPVN 247
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMG 151
IQFTSGTTG PK A L+H N++NN+N IG RL + DH++ + P++H + G
Sbjct: 248 IQFTSGTTGSPKGATLSHRNIVNNANLIGARLGITEQVGPADHRVCIPAPLYHCLASVGG 307
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + HGS+ + APSF+ +L A+++EKC
Sbjct: 308 CMVSALHGSSCIFSAPSFEGKATLEAVSQEKC 339
>gi|302557512|ref|ZP_07309854.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
gi|302475130|gb|EFL38223.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++I+ L+C D +NIQ+TSGTTG PK A L+H+N++NN ++G+ + + + D ++ L
Sbjct: 172 RPDEIAAGLSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYWVGRTVGYTERD-RVCLP 230
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ VVPAPSF P +L A+ +E+C
Sbjct: 231 VPFYHCFGMVMGNLAATSHGACIVVPAPSFDPAATLEAVQRERC 274
>gi|254389444|ref|ZP_05004671.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294815818|ref|ZP_06774461.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326444162|ref|ZP_08218896.1| AMP-binding domain protein [Streptomyces clavuligerus ATCC 27064]
gi|197703158|gb|EDY48970.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294328417|gb|EFG10060.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 563
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I + VP +H F
Sbjct: 200 TLSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGETLGYTERD-RICIPVPFYHCF 258
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L A +HG+ V+PAPSF P +LRA+A E+C
Sbjct: 259 GMVMGNLAATSHGACMVIPAPSFDPAATLRAVADERC 295
>gi|375134371|ref|YP_004995021.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121816|gb|ADY81339.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 564
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q++K + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLVTTPTSEQLEQLKQLAKQHQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|299770603|ref|YP_003732629.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
oleivorans DR1]
gi|298700691|gb|ADI91256.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
oleivorans DR1]
Length = 564
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD++ E + +Q++K + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIYRFSDLVTTPTSEQLEQLKQLAKQHQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|445428182|ref|ZP_21437917.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
gi|444762248|gb|ELW86617.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
Length = 564
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ E + +Q+++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTAQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|157106382|ref|XP_001649298.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868854|gb|EAT33079.1| AAEL014665-PA [Aedes aegypti]
Length = 546
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 11/152 (7%)
Query: 43 SAYKADALPTKLTRLALRM----------GTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92
S+Y + + +K+ L+ + GT D+M+ + E I +++
Sbjct: 129 SSYAGNIVSSKVPSLSAVIMKSNSGNKLQGTISYEDLMKTVSEKDIAYVESIQHNISPDS 188
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTD-HKILLQVPMFHTFGTAMG 151
G+N+QFTSGTTG PKAA L+H+N INN+ +G + F+ T+ H++ +QVP FH FG G
Sbjct: 189 GVNLQFTSGTTGQPKAALLSHFNFINNAISLGLKHGFNLTENHRVCIQVPFFHVFGVVTG 248
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
IL +++HG VVP P + P S+ AI E+C
Sbjct: 249 ILGSISHGCALVVPGPGYNPSASVLAIVSERC 280
>gi|295395646|ref|ZP_06805838.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971462|gb|EFG47345.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 575
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
R +++ Q +G + +R E IS LN D +N+Q+TSGTTG PK LTH+NL+NN FIG
Sbjct: 191 RGNELAQTSGAKMAQRLEAISHELNADDPVNLQYTSGTTGFPKGVTLTHHNLLNNGYFIG 250
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L + D ++ L VP FH FG +GIL A +HGST ++P P F P +L + K
Sbjct: 251 ELLSYTPAD-RVCLPVPFFHCFGMVIGILAAYSHGSTAIIPNPGFNPQKTLETVTAHKA 308
>gi|47217611|emb|CAG03008.1| unnamed protein product [Tetraodon nigroviridis]
Length = 445
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 4/158 (2%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLAL---RMGTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E++ P ++ LP + + L + GTF L ++MQ ++ + + ++
Sbjct: 174 QICPEMEAS-SPGDIRSSRLPELRSVVVLDSPQPGTFSLEEVMQAGSSRSRQQLQDLQRT 232
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INI FTSGTTG PKAA L+H+N++NNSN G+R E+D +I + VPMFH FG
Sbjct: 233 LTSDDPINILFTSGTTGFPKAATLSHFNIVNNSNLFGRRAEYDWRSVRICIPVPMFHCFG 292
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185
+G + HG++ V P+ +K +L + E+C +
Sbjct: 293 AVIGGIGMAVHGTSLVFPSAGYKIKTTLETLQNERCTD 330
>gi|425734007|ref|ZP_18852327.1| AMP-binding domain protein [Brevibacterium casei S18]
gi|425482447|gb|EKU49604.1| AMP-binding domain protein [Brevibacterium casei S18]
Length = 561
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 48 DALPTKL---TRLALRMGTFRLSD----IMQGAGPEYHRRREQISKSLNCRDGINIQFTS 100
D +P L T + R RL D +++ G +Y R EQ + L+ D INIQ+TS
Sbjct: 153 DTVPAALIGDTAVGERESFARLLDEGRSLLEDPGAKYAVRLEQAAGELSADDPINIQYTS 212
Query: 101 GTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160
GTTG PK L+H+N++NN FI + L + D ++L VP +H FG MG L A++HG+
Sbjct: 213 GTTGFPKGVTLSHHNILNNGYFIAELLSY-TPDDSVVLSVPYYHCFGMVMGNLAALSHGA 271
Query: 161 TTVVPAPSFKPMDSLRAIAKEKC 183
+ V+P+P F P SL A+A+EK
Sbjct: 272 SIVLPSPGFDPAASLTAVAEEKA 294
>gi|157106380|ref|XP_001649297.1| AMP dependent coa ligase [Aedes aegypti]
gi|108868853|gb|EAT33078.1| AAEL014663-PA [Aedes aegypti]
Length = 382
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 69/102 (67%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E + S++ G+N+QFTSGTTG PKAA +TH INN+ + R EFD H+I LQ+P
Sbjct: 14 ESLQSSISPDSGLNMQFTSGTTGLPKAALVTHNGFINNAIHLAHRNEFDVKQHRICLQLP 73
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH F +G+L A +G+T V+P +KPM+S+ AI KEKC
Sbjct: 74 LFHAFAMVVGVLTAFTYGTTIVLPGARYKPMESIEAIIKEKC 115
>gi|84502154|ref|ZP_01000302.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
gi|84389514|gb|EAQ02233.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
Length = 585
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++ GP R QI + L D INIQFTSGTTGHPK A L+HYN++NN+
Sbjct: 198 GAWSFDEVATLGGPAQQLRLPQIDRGLQPDDAINIQFTSGTTGHPKGATLSHYNVLNNAR 257
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ R+ + D ++ + VP++H FG MG+L A++ G+ V P +F P+ +L A++ E
Sbjct: 258 FVTDRIRLTEND-RLAIPVPLYHCFGMVMGVLGAVSKGAAMVFPGEAFDPVATLDAVSAE 316
Query: 182 KC 183
+C
Sbjct: 317 RC 318
>gi|395776250|ref|ZP_10456765.1| AMP-binding domain protein [Streptomyces acidiscabies 84-104]
Length = 496
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ L +D+ + +I + VP +H FG
Sbjct: 140 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELLGYDEQE-RICVPVPFYHCFG 198
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ VVPAPSF+P +L A+ +E+C
Sbjct: 199 MVMGNLAATSHGACIVVPAPSFEPAATLHAVQRERC 234
>gi|170028425|ref|XP_001842096.1| acetyl-coenzyme A synthetase [Culex quinquefasciatus]
gi|167874251|gb|EDS37634.1| acetyl-coenzyme A synthetase [Culex quinquefasciatus]
Length = 853
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 42 PSAYKADALPTKLTRLALRM-------GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
P K+ A+P+ L+ + + + GT D+++ A + + + S++ G+
Sbjct: 441 PEKLKSSAVPS-LSTVIIDVDDKRALPGTIGYQDLLKIAPKQEQAKISSLQSSISPDSGV 499
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT-DHKILLQVPMFHTFGTAMGIL 153
N+QFTSGTTG PKAA L+HYN +NN+ +G R F++ H+I +Q P FH FG +GI
Sbjct: 500 NLQFTSGTTGQPKAALLSHYNFVNNALTVGVRNGFEENRKHRICVQNPFFHVFGMVVGIT 559
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A +G T V+P P FK +S++AI KEKC
Sbjct: 560 TAAGYGCTLVLPGPGFKAEESVQAIIKEKC 589
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 113 HYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172
HY +NN I R EFD++ H+I LQVP+FH + +GI+ A+ HG+T V+P + P+
Sbjct: 3 HYGFVNNGIHIAVRNEFDRSLHRICLQVPLFHAYAIVVGIMAALTHGTTLVLPDSGYNPL 62
Query: 173 DSLRAIAKEKC 183
SL AI KEKC
Sbjct: 63 QSLEAIVKEKC 73
>gi|455641051|gb|EMF20249.1| AMP-binding domain protein [Streptomyces gancidicus BKS 13-15]
Length = 530
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ + L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ +++ + D ++ + VP
Sbjct: 167 DPVHPELSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGELIDYSEQD-RVCIPVP 225
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAPSF P +LRA+ +E+C
Sbjct: 226 FYHCFGMVMGNLAATSHGACMVIPAPSFDPAATLRAVQQERC 267
>gi|218563680|ref|NP_001038884.2| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
gi|218749805|ref|NP_001132910.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
Length = 606
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 42 PSAYKADALP---TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF 98
P K+ LP T + + + G+F L D+MQ +++++ + + K L C D INIQF
Sbjct: 196 PGGIKSSRLPDLHTVIVTDSQQPGSFLLKDLMQAGSSQHYQQLQDLQKKLVCDDPINIQF 255
Query: 99 TSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMN 157
TSGTTG PK A L+H+N++NN+ F G R+ ++ + + +I L VP++H FG+ G +
Sbjct: 256 TSGTTGKPKGATLSHHNIVNNAYFTGMRIGYNWRKNVRICLPVPLYHCFGSVGGGVIMAL 315
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+T + P+ + +LRAI KEKC
Sbjct: 316 YGTTVIFPSTGYDGRANLRAIEKEKC 341
>gi|123914455|sp|Q0P4F7.1|ACSF2_DANRE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|112418669|gb|AAI22099.1| Acyl-CoA synthetase family member 2 [Danio rerio]
Length = 606
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 42 PSAYKADALP---TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF 98
P K+ LP T + + + G+F L D+MQ +++++ + + K L C D INIQF
Sbjct: 196 PGGIKSSRLPDLHTVIVTDSQQPGSFLLKDLMQAGSSQHYQQLQDLQKKLVCDDPINIQF 255
Query: 99 TSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMN 157
TSGTTG PK A L+H+N++NN+ F G R+ ++ + + +I L VP++H FG+ G +
Sbjct: 256 TSGTTGKPKGATLSHHNIVNNAYFTGMRIGYNWRKNVRICLPVPLYHCFGSVGGGVIMAL 315
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+T + P+ + +LRAI KEKC
Sbjct: 316 YGTTVIFPSTGYDGRANLRAIEKEKC 341
>gi|429197284|ref|ZP_19189190.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
gi|428667012|gb|EKX66129.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
Length = 555
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP +H
Sbjct: 197 AGELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYGEQD-RICIPVPYYH 255
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF P +LRA+ +E+C
Sbjct: 256 CFGMVMGNLAATSHGACMVIPAPSFDPAATLRAVEQERC 294
>gi|297203377|ref|ZP_06920774.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
gi|197711466|gb|EDY55500.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
Length = 528
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ + L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP
Sbjct: 165 DAVHPELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYSEQD-RICIPVP 223
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAPSF P +LRA+ +E C
Sbjct: 224 FYHCFGMVMGNLAATSHGACMVIPAPSFDPAATLRAVQQEGC 265
>gi|425747028|ref|ZP_18865048.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
gi|425484455|gb|EKU50859.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
Length = 564
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ P+ + +++ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLVGQPTPQQLEQLHALAQHLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++ + VP+FH FG MG L + HGST V PA F P++SL+ I +E
Sbjct: 234 FVGEGIGLTPQD-RVCISVPLFHCFGMVMGNLACITHGSTMVYPAAVFNPLESLKTIHQE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|119474942|ref|ZP_01615295.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119451145|gb|EAW32378.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 557
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F S++ + G R+ E +SK+L+ D INIQFTSGTTG PK A L+H N++NN+
Sbjct: 172 GMFNFSNVCEMGGETECRKLEDLSKTLDPSDDINIQFTSGTTGTPKGATLSHTNILNNAY 231
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ G + F+ D + + VPM+H FG +G L + HG+T V+P +F P L+A+ E
Sbjct: 232 YCGISMHFN-ADDILCIPVPMYHCFGMVLGTLVCVAHGATMVLPCEAFDPRSVLQAVQDE 290
Query: 182 KC 183
KC
Sbjct: 291 KC 292
>gi|418472696|ref|ZP_13042408.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
gi|371546689|gb|EHN75137.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
Length = 536
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++ L+C D +NIQ+TSGTTG PK A L+H+N++NN ++G+ + + + D ++ L
Sbjct: 171 RADALAAELSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYWVGRTVGYTEQD-RVCLP 229
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +HG+ V+PAPSF P+ +L A+ +E+C
Sbjct: 230 VPFYHCFGMVMGNLGVTSHGACIVIPAPSFDPVATLEAVQRERC 273
>gi|24581924|ref|NP_608924.1| CG12512 [Drosophila melanogaster]
gi|7296974|gb|AAF52246.1| CG12512 [Drosophila melanogaster]
gi|223976007|gb|ACN32191.1| MIP06029p [Drosophila melanogaster]
Length = 593
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + A ++ KS+ NIQFTSGTTG+PKAA LTH+N +NN
Sbjct: 201 GALRFDDFLDLASKSEREEVAKMQKSILPESACNIQFTSGTTGNPKAACLTHHNFVNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E + +I +QVPMFH FG + I+ A+ G+T V+PA F P DSL+AI E
Sbjct: 261 HVGNRNELE--GERICVQVPMFHAFGVIISIMAALTKGATMVLPAAGFSPKDSLQAIVNE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|407007059|gb|EKE22823.1| hypothetical protein ACD_6C00713G0002 [uncultured bacterium]
Length = 562
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D++ + + +QIS L + INIQFTSGTTG+PK LTH N++NN
Sbjct: 174 GIHRFQDLLSSPSAQELEQLQQISSELQFDETINIQFTSGTTGNPKGTMLTHNNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++ + VP+FH FG MG L + HGS + P+ F P+++L+AI +E
Sbjct: 234 FVGEAIHLGPED-RVCISVPLFHCFGMVMGNLACITHGSAMIYPSAVFNPLETLKAIQQE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|118099923|ref|XP_420105.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gallus gallus]
Length = 593
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
N P K+ LP T + L GTF + ++MQ + ++ + ++L+C + +N
Sbjct: 177 NSSPGGIKSKRLPDLSTVIMLDSKLPGTFHMDEVMQAGDSSHMKQLRALQQTLSCNEPVN 236
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMG 151
IQFTSGTTG PK A L+H N++NN+N IG RL + D+++ + P++H + G
Sbjct: 237 IQFTSGTTGSPKGATLSHRNIVNNANLIGMRLGITEQVGPADYRVCIPAPLYHCLASVGG 296
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + HGS+ V APSF+ +L A+++EKC
Sbjct: 297 CMVSALHGSSCVFSAPSFEGKATLEAVSQEKC 328
>gi|424743496|ref|ZP_18171806.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
gi|422943330|gb|EKU38352.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
Length = 564
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ E + + ++K L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLVTTPTSEQLEQLKLLTKQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGSTMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|29828572|ref|NP_823206.1| AMP-binding domain protein [Streptomyces avermitilis MA-4680]
gi|29605676|dbj|BAC69741.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 540
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +G + GA + R + L+C D +NIQ+TSGTTG PK A L+H+N
Sbjct: 147 RETVYIGDPSWEALTAGAASVPYERLIAGAADLSCDDPVNIQYTSGTTGFPKGATLSHHN 206
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN ++G+ + + + D ++ L VP++H FG MG L A +HG+ V+PAPSF P +L
Sbjct: 207 ILNNGYWVGRTVGYTEED-RVCLPVPLYHCFGMVMGALGATSHGACIVLPAPSFDPAATL 265
Query: 176 RAIAKEKC 183
A+ +E+C
Sbjct: 266 AAVQRERC 273
>gi|319782251|ref|YP_004141727.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168139|gb|ADV11677.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 590
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P KA LP ++ +RMG F D++ AG + H ++IS+ L + IN
Sbjct: 176 PGKLKAQKLPA--LKIVIRMGDENSPGMFNFGDVLAMAGRDEHDSLDRISEKLKPGEAIN 233
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN NF+ ++ D ++ + VP++H FG +MG +
Sbjct: 234 IQFTSGTTGAPKGATLTHGNIVNNGNFVTSAIKL-TADDRLCIPVPLYHCFGMSMGTMGC 292
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+T V P F +L+A+A+E+C
Sbjct: 293 VSKGATMVFPGEGFDAGATLKAVAQERC 320
>gi|449283065|gb|EMC89768.1| Acyl-CoA synthetase family member 2, mitochondrial, partial
[Columba livia]
Length = 558
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 42 PSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF 98
P K+ LP + L GTF + ++MQ + ++ +SL+C + INIQF
Sbjct: 163 PGGIKSKRLPDLSIVITLDSKLPGTFHMDEVMQAGDSSHMKQLRATQQSLSCNEPINIQF 222
Query: 99 TSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNH 158
TSGTTG PK A L+H N++NN+N IG RL F + D+++++ P++H G + H
Sbjct: 223 TSGTTGSPKGATLSHSNIVNNANLIGMRLGFTEQDYRVVIPAPLYHCLALVGGCVVMALH 282
Query: 159 GSTTVVPAPSFKPMDSLRAIAKEKC 183
GS+ + +P+F+ +L ++++EKC
Sbjct: 283 GSSCIFSSPTFEGKAALESVSQEKC 307
>gi|359425223|ref|ZP_09216323.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239311|dbj|GAB05905.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 551
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
P+ R QI+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+ LE+ TD
Sbjct: 172 PDEAARVGQIAASLSPDDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLEYTDTD- 230
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+I L VP +H FG MG L A +HG+ V+PAP+F P +LRA+ + +C
Sbjct: 231 RICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPEATLRAVERHRC 279
>gi|320039653|gb|EFW21587.1| acid Co-A ligase [Coccidioides posadasii str. Silveira]
Length = 595
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR+E++S S C N+QFTSG+TG+PKAA L+HYNLINNS FIG R++F ++D +
Sbjct: 216 QRRQEELSPSDVC----NLQFTSGSTGNPKAAMLSHYNLINNSRFIGDRMDFTQSD-VLC 270
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V P +F P LRAI+ EKC
Sbjct: 271 CPPPLFHCFGLVLGLLACITHGAKIVYPGETFDPEAVLRAISDEKC 316
>gi|297191141|ref|ZP_06908539.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723338|gb|EDY67246.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 535
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ + VP +H FG
Sbjct: 178 LSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYTEQD-RVCIPVPFYHCFG 236
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF P +LRA+ +E+C
Sbjct: 237 MVMGNLAATSHGACMVIPAPSFDPAATLRAVQQERC 272
>gi|443686109|gb|ELT89489.1| hypothetical protein CAPTEDRAFT_222402 [Capitella teleta]
Length = 577
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 5/147 (3%)
Query: 42 PSAYKADALPTKLTRLALRM----GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P+ K++ LP + + + G + D+M G ++RR +I + D +NI
Sbjct: 164 PNDLKSERLPDLKSVIMISEKKFPGALSVHDVMTSGESTAFNRRLLEIQDKIQFDDPVNI 223
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG+PK L+H+N++NNS F RL + + H+I + VP++H FG +G L +
Sbjct: 224 QFTSGTTGNPKGVLLSHHNIVNNSYFSALRLNYHQKPHRICIPVPLYHCFGMVIGSLQNV 283
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
STTV P+ SF P L+AI +EKC
Sbjct: 284 TSASTTVYPSGSFNPEACLKAIEQEKC 310
>gi|333922026|ref|YP_004495607.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484247|gb|AEF42807.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 556
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 6/136 (4%)
Query: 53 KLTRL--ALRMGTFRLSDIMQGAGPEYHRRREQISKS---LNCRDGINIQFTSGTTGHPK 107
K TRL A+ +G+ I + + K+ L+ D INIQ+TSGTTG PK
Sbjct: 156 KTTRLEHAIFLGSSEWHSIFTSGADSLRADADIVRKAQAKLSADDAINIQYTSGTTGFPK 215
Query: 108 AAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167
A L+H+N++NN F+G+ L + + D ++ + VP +H FG MG L ++HGST V+PAP
Sbjct: 216 GATLSHHNILNNGFFVGELLSYTEED-RVCIPVPFYHCFGMVMGNLACVSHGSTMVIPAP 274
Query: 168 SFKPMDSLRAIAKEKC 183
SF+P +L+A+++E+C
Sbjct: 275 SFEPQATLQAVSEERC 290
>gi|293608450|ref|ZP_06690753.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427422891|ref|ZP_18913065.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
gi|292829023|gb|EFF87385.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700526|gb|EKU70109.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
Length = 564
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ E + + ++K L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLVTTPTSEQLEQLKLLTKQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTAED-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|334349356|ref|XP_001376331.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Monodelphis domestica]
Length = 1033
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
Query: 42 PSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF 98
P +++ LP T + + GT ++D++Q + I KSL+C D INIQF
Sbjct: 204 PGELRSERLPDLTTVIMVDSKLPGTLHMNDVLQSGNAAQMDQLRDIEKSLSCYDPINIQF 263
Query: 99 TSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNH 158
TSGTTG PKAA L+H+N++NNS FIG+R+ K + +++L P++H G+ G + ++ +
Sbjct: 264 TSGTTGTPKAATLSHHNIVNNSIFIGRRMNLHKKEARLVLPSPLYHCLGSVGGTMVSILY 323
Query: 159 GSTTVVPAPSFKPMDSLRAIAKEK 182
G T ++ +PSF+ +L +A+E+
Sbjct: 324 GVTFILSSPSFEGKTALEVVARER 347
>gi|355666783|gb|AER93651.1| acyl-CoA synthetase family member 2 [Mustela putorius furo]
Length = 616
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
P A + LP T +++ GT L +++ G E HR R Q S+ L+C D INI
Sbjct: 202 EPGALNSQRLPDLTTVISVDDPLPGTLLLKEVVAAGGEEQHRARLQYSQQFLSCHDPINI 261
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KT--DHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG+R++ KT + +++L P++H G+ G +
Sbjct: 262 QFTSGTTGRPKGATLSHYNIVNNSNLIGERIKLHLKTPEETRMVLPSPLYHCLGSVGGTM 321
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ +G+T ++ +P+F +L AI+KE+
Sbjct: 322 VSLMYGATLILSSPTFDGKKALEAISKER 350
>gi|21224520|ref|NP_630299.1| AMP-binding domain-containing protein [Streptomyces coelicolor
A3(2)]
gi|4455741|emb|CAB36604.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces coelicolor
A3(2)]
Length = 541
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +G + GA R + ++ L+C D +NIQ+TSGTTG PK A L+H+N
Sbjct: 151 RETVYIGDPSWDALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFPKGATLSHHN 210
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN ++G+ + + + D ++ L VP +H FG MG L A +HG+ V+PAPS +P +L
Sbjct: 211 ILNNGYWVGRTVGYTEQD-RVCLPVPFYHCFGMVMGNLGATSHGACIVIPAPSSEPAATL 269
Query: 176 RAIAKEKC 183
A+ +E+C
Sbjct: 270 EAVQRERC 277
>gi|410980755|ref|XP_003996741.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Felis catus]
Length = 615
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K+ LP T +++ GT L +++ E H R + ++ L+C D INI
Sbjct: 201 QPGALKSQRLPDLTTVISVDDPLPGTLLLDEVVAAGSTEQHLARLRYTQQFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG RL D +I+L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNSNMIGDRLRLHLKTSEDLRIILPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ +G+T ++P P+F +L AI+KE+
Sbjct: 321 VSLMYGATLILPCPTFDGKKALEAISKER 349
>gi|388569103|ref|ZP_10155510.1| FadD3 protein [Hydrogenophaga sp. PBC]
gi|388263662|gb|EIK89245.1| FadD3 protein [Hydrogenophaga sp. PBC]
Length = 564
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMGTFR------LSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P +A ALP R +R+G R +D+ A P R I L RD IN
Sbjct: 150 PGQLQAVALPE--LRWVVRLGEERTPGMLNFADVSARATPAARERLAAIGPRLKARDPIN 207
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTGHPK A LTH N++NN F+G+ + D ++ + VP++H FG MG L
Sbjct: 208 IQFTSGTTGHPKGATLTHRNILNNGFFVGEAIRLTPAD-RLCIPVPLYHCFGMVMGNLAC 266
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGST V P+ +F LR + E+C
Sbjct: 267 VTHGSTMVYPSEAFDSAAVLRTVQAERC 294
>gi|386382177|ref|ZP_10067822.1| AMP-binding domain protein [Streptomyces tsukubaensis NRRL18488]
gi|385670360|gb|EIF93458.1| AMP-binding domain protein [Streptomyces tsukubaensis NRRL18488]
Length = 551
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I + VP +H F
Sbjct: 193 ALSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGWFVGESLGYTEKD-RICIPVPFYHCF 251
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L A +HG+ V+PAPSF P +L A+A E+C
Sbjct: 252 GMVMGNLAATSHGACMVIPAPSFDPGATLAAVAAERC 288
>gi|262278713|ref|ZP_06056498.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
gi|262259064|gb|EEY77797.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
Length = 564
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ E + +Q++K + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLVTTPNSEQLEQLKQLTKQHQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+++L+AI +E
Sbjct: 234 FVGEGIRLTPQD-KVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|258654979|ref|YP_003204135.1| AMP-binding domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258558204|gb|ACV81146.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
Length = 549
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
HR+ E L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + D ++
Sbjct: 175 HRQAE-----LSADDPINIQYTSGTTGFPKGATLSHHNIVNNGYFVGRLCGYTPAD-RVC 228
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ VP +H FG MG L A+ HG+T V+PAP F P +LRA+A E+C
Sbjct: 229 IPVPFYHCFGMVMGNLGALTHGATMVIPAPGFDPAATLRAVAAERC 274
>gi|392863094|gb|EAS36200.2| long chain fatty acid-CoA ligase [Coccidioides immitis RS]
Length = 595
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR+E++S S C N+QFTSG+TG+PKAA L+HYNL+NNS FIG R++F ++D +
Sbjct: 216 QRRQEELSPSDVC----NLQFTSGSTGNPKAAMLSHYNLVNNSRFIGDRMDFTQSD-VLC 270
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V P +F P LRAI+ EKC
Sbjct: 271 CPPPLFHCFGLVLGLLACITHGAKIVYPGETFDPEAVLRAISDEKC 316
>gi|290956371|ref|YP_003487553.1| long-chain-fatty-acid-CoA ligase [Streptomyces scabiei 87.22]
gi|260645897|emb|CBG68988.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces scabiei
87.22]
Length = 530
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I + VP +H
Sbjct: 171 EELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGESLAYTEQD-RICVPVPFYHC 229
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF P +L A+ +E+C
Sbjct: 230 FGMVMGNLAATSHGACVVIPAPSFDPGATLEAVRQERC 267
>gi|410902581|ref|XP_003964772.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 904
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + D+MQ A +HR ++ L+C INIQFTSGTTG PK A L+H+N++NN+
Sbjct: 515 GMLHVEDVMQAAESRHHRELLELQSKLSCDGPINIQFTSGTTGSPKGATLSHHNIVNNAY 574
Query: 122 FIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R ++ + ++ LQVPM+H FG+ +G ++ HG T V P+ + +L AI K
Sbjct: 575 FIGLRNGYNSRPRTRVCLQVPMYHCFGSVVGGMSMAVHGITLVFPSHGYNCQANLEAIQK 634
Query: 181 EKC 183
EKC
Sbjct: 635 EKC 637
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + D+MQ A +HR ++ L+C INIQFTSGTTG PK A L+H+N++NN+
Sbjct: 193 GMLHVEDVMQAAESRHHRELLELQSKLSCDGPINIQFTSGTTGSPKGATLSHHNIVNNAY 252
Query: 122 FIGKRLEFD 130
FIG R ++
Sbjct: 253 FIGLRNNYN 261
>gi|126740263|ref|ZP_01755952.1| acyl-CoA synthase [Roseobacter sp. SK209-2-6]
gi|126718718|gb|EBA15431.1| acyl-CoA synthase [Roseobacter sp. SK209-2-6]
Length = 582
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT+ + + GP R +I K+L D INIQFTSGTTG PK A L+HYN++NN+
Sbjct: 200 GTYSFEALRKLGGPAQQLRIPEIDKTLGPDDAINIQFTSGTTGMPKGATLSHYNIVNNAR 259
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
++ R+ +TD ++ + VP++H FG MG+L ++ G+T + P F +L A+AKE
Sbjct: 260 YVTDRIGLTETD-RLAIPVPLYHCFGMVMGVLGVVSKGATMIFPGEGFDAGQTLDALAKE 318
Query: 182 KC 183
+C
Sbjct: 319 RC 320
>gi|262376316|ref|ZP_06069546.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262308917|gb|EEY90050.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 562
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D++ + + +QIS L + INIQFTSGTTG+PK LTH N++NN
Sbjct: 174 GIHRFQDLLSSPSAQELEQLQQISSELQFDETINIQFTSGTTGNPKGTMLTHNNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++ + VP+FH FG MG L + HGS + P+ F P+++L+AI +E
Sbjct: 234 FVGEAIHLGPED-RVCISVPLFHCFGMVMGNLACITHGSAMIYPSAVFNPLETLKAIQQE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|119194119|ref|XP_001247663.1| hypothetical protein CIMG_01434 [Coccidioides immitis RS]
Length = 600
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR+E++S S C N+QFTSG+TG+PKAA L+HYNL+NNS FIG R++F ++D +
Sbjct: 221 QRRQEELSPSDVC----NLQFTSGSTGNPKAAMLSHYNLVNNSRFIGDRMDFTQSD-VLC 275
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V P +F P LRAI+ EKC
Sbjct: 276 CPPPLFHCFGLVLGLLACITHGAKIVYPGETFDPEAVLRAISDEKC 321
>gi|354612743|ref|ZP_09030685.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222881|gb|EHB87176.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 551
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R I+ +L+ D INIQ+TSGTTG PK A L+H+N++NN +G+ +D+TD +I L
Sbjct: 174 RLADIAATLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFSVGELCGYDETD-RICLP 232
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ TV+PAP+F P +L A+ E+C
Sbjct: 233 VPFYHCFGMVMGNLAATSHGAATVIPAPAFDPAATLAAVEAERC 276
>gi|321477421|gb|EFX88380.1| hypothetical protein DAPPUDRAFT_96055 [Daphnia pulex]
Length = 965
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D+M A + + + + + NIQFTSGTTG+PK A L+H N++NN+
Sbjct: 579 GALRWQDLMDLATSDLVAEIHNLQREIEIDEPANIQFTSGTTGNPKGATLSHKNIVNNAY 638
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G RL +DK HKI + VP++H G +G+L A +HG+T + P+P F ++++A+ E
Sbjct: 639 LVGLRLNYDKMAHKICVPVPLYHCAGCVVGVLTAASHGATCIFPSPVFSAREAVKAVHHE 698
Query: 182 KC 183
+C
Sbjct: 699 RC 700
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ + + D NIQFTSGTTG PK A L+H N++NNS +G R+ + + +HKI + VP++
Sbjct: 15 LQRGIQVDDAANIQFTSGTTGSPKGATLSHNNIVNNSYNVGLRVGYHQKEHKICVPVPLY 74
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + +L A + G+T V P+P F ++++AI E+C
Sbjct: 75 HCFGCGLAVLAAASFGATCVFPSPVFSAREAVKAIHHERC 114
>gi|341880983|gb|EGT36918.1| hypothetical protein CAEBREN_11693 [Caenorhabditis brenneri]
Length = 597
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E + +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 198 GAWKYTDVMKMGTEEDRHQLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHNVLNNAF 257
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 258 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 317
Query: 182 KC 183
KC
Sbjct: 318 KC 319
>gi|194760629|ref|XP_001962541.1| GF15513 [Drosophila ananassae]
gi|190616238|gb|EDV31762.1| GF15513 [Drosophila ananassae]
Length = 595
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D++ A + +I + NIQFTSGTTG+PKAA L+HYN +NN
Sbjct: 202 GALRFDDLLDLANKSEREKISKIQNEVLPESPCNIQFTSGTTGNPKAAALSHYNFVNNGI 261
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E +I +QVPMFH FG + I+ AM G+T V+PA F P DSL AI E
Sbjct: 262 HVGNRNEL--AGERICVQVPMFHAFGVVITIMGAMTKGATMVLPAAGFSPKDSLHAIVNE 319
Query: 182 KC 183
KC
Sbjct: 320 KC 321
>gi|443622955|ref|ZP_21107468.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
gi|443343506|gb|ELS57635.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
Length = 530
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ + VP +H
Sbjct: 171 EELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYSEQD-RVCIPVPFYHC 229
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF P +L A+ +E+C
Sbjct: 230 FGMVMGNLAATSHGACMVIPAPSFDPKATLEAVQRERC 267
>gi|443702072|gb|ELU00234.1| hypothetical protein CAPTEDRAFT_220839 [Capitella teleta]
Length = 603
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 42 PSAYKADALPTKLTRLALR----MGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P+ K++ LP + + + G + D+M G ++RR +I ++ D +NI
Sbjct: 189 PNDLKSERLPDLKSVIMISEKKFAGALSVHDVMTSGESTAFYRRLLEIQDNVQFDDPVNI 248
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PKA L+H+N++NN+ F +RL + + H+I + VP++H FG +G L+++
Sbjct: 249 QFTSGTTGKPKAVLLSHHNMVNNAYFCTRRLNYHQKPHRICVPVPLYHCFGMVVGSLHSI 308
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187
+T V P+ FKP L++I +E+C L
Sbjct: 309 VSAATAVYPSNGFKPEACLKSIEQERCTSLL 339
>gi|321466592|gb|EFX77587.1| hypothetical protein DAPPUDRAFT_54086 [Daphnia pulex]
Length = 577
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%)
Query: 59 LRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN 118
+ GT+R DIMQ G + I + + NIQFTSGTTG PK A LTH+N++N
Sbjct: 187 IEKGTWRFQDIMQMGGNNELKEIGGIQSKIQFDEPANIQFTSGTTGSPKGATLTHHNIVN 246
Query: 119 NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
N +G R + H++ L VP++H FG MG+L+A++HG + V+ +P+F +++A+
Sbjct: 247 NGYLMGLRTGYHLKAHRLCLPVPLYHCFGCVMGVLSAVSHGGSYVLSSPAFSARKAVKAV 306
Query: 179 AKEKC 183
+E+C
Sbjct: 307 EQERC 311
>gi|341891057|gb|EGT46992.1| hypothetical protein CAEBREN_25008 [Caenorhabditis brenneri]
Length = 633
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E + +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 234 GAWKYTDVMKMGTEEDRHQLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHNVLNNAF 293
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 294 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 353
Query: 182 KC 183
KC
Sbjct: 354 KC 355
>gi|302530557|ref|ZP_07282899.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
gi|302439452|gb|EFL11268.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
Length = 546
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+GT +D+M+ R Q+ L+ D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 150 LGTSSWTDLMESGRGGDPARLAQLQAGLSADDPINIQYTSGTTGFPKGATLSHHNILNNG 209
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
F+G+ + + D ++ + VP +H FG MG L +HG+ V+PAP+F P +L A+A
Sbjct: 210 YFVGELCNYTEED-RVCIPVPFYHCFGMVMGNLACTSHGACMVIPAPAFDPKATLAAVAA 268
Query: 181 EKC 183
E+C
Sbjct: 269 ERC 271
>gi|408528321|emb|CCK26495.1| Putative acyl-CoA synthetase YngI [Streptomyces davawensis JCM
4913]
Length = 529
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ L VP +
Sbjct: 169 LPDDLSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYTEQD-RVCLPVPFY 227
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L A +HG+ V+PAPSF+P +L A+ +E+C
Sbjct: 228 HCFGMVMGNLAATSHGACIVIPAPSFEPKATLEAVQQERC 267
>gi|308501092|ref|XP_003112731.1| CRE-ACS-1 protein [Caenorhabditis remanei]
gi|308267299|gb|EFP11252.1| CRE-ACS-1 protein [Caenorhabditis remanei]
Length = 645
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 230 GAWKYTDVMKMGTEEDRHHLSKIERETQPDDALNIQYTSGTTGQPKGATLTHHNVLNNAF 289
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 290 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 349
Query: 182 KC 183
KC
Sbjct: 350 KC 351
>gi|71994690|ref|NP_001023937.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
gi|351063224|emb|CCD71310.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
Length = 623
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 224 GAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHNVLNNAF 283
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 284 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 343
Query: 182 KC 183
KC
Sbjct: 344 KC 345
>gi|408681796|ref|YP_006881623.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
gi|328886125|emb|CCA59364.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
Length = 534
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+C + +NIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP +H
Sbjct: 174 EPLSCDEPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGEMIAYSEQD-RICIPVPFYHC 232
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF P +LRA+ +E+C
Sbjct: 233 FGMVMGNLAATSHGACMVIPAPSFDPAATLRAVQEERC 270
>gi|71994694|ref|NP_001023938.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
gi|351063225|emb|CCD71311.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
Length = 597
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 198 GAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHNVLNNAF 257
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 258 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 317
Query: 182 KC 183
KC
Sbjct: 318 KC 319
>gi|71994703|ref|NP_001023939.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
gi|351063226|emb|CCD71312.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
Length = 578
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +D+M+ E +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 179 GAWKYTDVMKMGTEEDRHHLSKIERETQPDDSLNIQYTSGTTGQPKGATLTHHNVLNNAF 238
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 239 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALQAIHEE 298
Query: 182 KC 183
KC
Sbjct: 299 KC 300
>gi|378549663|ref|ZP_09824879.1| hypothetical protein CCH26_06240 [Citricoccus sp. CH26A]
Length = 552
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 66 LSDIMQGAGPEYH---------RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
L D++ PE+ R +++ L+ D INIQ+TSGTTG PK A LTH N+
Sbjct: 151 LRDVVILGTPEWEGLAGATADEDRLAKVAADLSPDDPINIQYTSGTTGFPKGATLTHRNI 210
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN F G+R+E+ + D +I + VP +H FG +G L A HG+ V+PAP F P +L
Sbjct: 211 LNNGYFDGERVEYTEAD-RICIPVPFYHCFGMVIGNLAATTHGAAMVIPAPGFDPAATLH 269
Query: 177 AIAKEKC 183
A+A EKC
Sbjct: 270 AVATEKC 276
>gi|195034772|ref|XP_001988972.1| GH11457 [Drosophila grimshawi]
gi|193904972|gb|EDW03839.1| GH11457 [Drosophila grimshawi]
Length = 600
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R +++ + ++ + + N+QFTSGTTG+PKAA L+HYN +NN
Sbjct: 202 GALRFDELLDLSNASEQEEITKLQREIQPESPCNVQFTSGTTGNPKAAVLSHYNFVNNGI 261
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E D +I +QVP+FH FG + I+ AM+ G+T V+P+ F P DSL+AI +E
Sbjct: 262 HVGSRNELD--GERICVQVPLFHAFGVGITIMAAMSKGATLVLPSAGFSPKDSLQAIVEE 319
Query: 182 KC 183
KC
Sbjct: 320 KC 321
>gi|324506941|gb|ADY42950.1| Acyl-CoA synthetase family member 2 [Ascaris suum]
Length = 634
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ S++++ E + I + + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 196 GAWKYSEVIKMGTEEDRIKLADIERQVQPDDPVNIQYTSGTTGVPKGATLTHHNVVNNAY 255
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+R + + I + P++H FG MG LNA H T V PAPSF+P+ +L+AI +E
Sbjct: 256 FIGRRAGYSEKRTIICVPNPLYHCFGCVMGSLNACIHLQTCVFPAPSFEPLAALQAIHEE 315
Query: 182 KC 183
+C
Sbjct: 316 RC 317
>gi|170585217|ref|XP_001897382.1| AMP-binding enzyme family protein [Brugia malayi]
gi|158595208|gb|EDP33778.1| AMP-binding enzyme family protein [Brugia malayi]
Length = 631
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD+++ E + I + + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 214 GAWRYSDVIKMGTEEDRLKLADIERQIQPDDPVNIQYTSGTTGQPKGATLTHHNVVNNAY 273
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+R +++ I + P++H FG MG L+A H T V PAPSF + +L+AI +E
Sbjct: 274 FVGRRAGYNEKRTIICIPNPLYHCFGCVMGSLSACVHLQTCVFPAPSFDALAALQAIHEE 333
Query: 182 KC 183
+C
Sbjct: 334 RC 335
>gi|357027401|ref|ZP_09089479.1| AMP-binding domain protein [Mesorhizobium amorphae CCNWGS0123]
gi|355540700|gb|EHH09898.1| AMP-binding domain protein [Mesorhizobium amorphae CCNWGS0123]
Length = 588
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P KA LP ++ +RMG + D++ AG + H ++IS+ L + IN
Sbjct: 174 PGKLKAKKLPA--LKIVIRMGEDNSPGMYNFGDVLAMAGRDEHDSLDRISEGLKPGEAIN 231
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN NF+ ++ D ++ + VP++H FG +MG +
Sbjct: 232 IQFTSGTTGAPKGATLTHNNIVNNGNFVTSAIKL-TVDDRLCIPVPLYHCFGMSMGTIGC 290
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+T V P F +L+A+A+E+C
Sbjct: 291 VTKGATMVFPGEGFDAGATLKAVAQERC 318
>gi|433608182|ref|YP_007040551.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407886035|emb|CCH33678.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 554
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ L + D +I L VP++H FG
Sbjct: 185 LSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELLGY-TVDDRICLPVPLYHCFG 243
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A HG+ V+PAP+F P +L+A+A E+C
Sbjct: 244 LVMGNLAATTHGACVVLPAPAFDPAATLKAVADERC 279
>gi|268558570|ref|XP_002637276.1| Hypothetical protein CBG18959 [Caenorhabditis briggsae]
Length = 624
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 76/122 (62%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ +++M+ E + +I + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 225 GAWKYTEVMKMGTEEDRHQLSKIERETQPDDALNIQYTSGTTGQPKGATLTHHNVLNNAF 284
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G R + + I + P++H FG MG+L A+ H T V PAPSF + +L+AI +E
Sbjct: 285 FVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDALAALKAIHEE 344
Query: 182 KC 183
KC
Sbjct: 345 KC 346
>gi|302555107|ref|ZP_07307449.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
gi|302472725|gb|EFL35818.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP +H
Sbjct: 168 EELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYTEQD-RICVPVPFYHC 226
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF P +L A+ +E+C
Sbjct: 227 FGMVMGNLAATSHGACIVIPAPSFDPKATLDAVQRERC 264
>gi|291228112|ref|XP_002734032.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 621
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 76/126 (60%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + DIM+ E+ + I L D INIQ+TSGTTG+PK L+H+N++NN N
Sbjct: 221 GAYMFDDIMEAGTHEHILEVKDIQDELQFDDPINIQYTSGTTGNPKGVTLSHHNILNNCN 280
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G+ L + + DH I + VP++H FG +G L+ GST V P+ F+P ++L+AI E
Sbjct: 281 IVGRTLGYHERDHVICIPVPLYHCFGMTLGSLSGQIFGSTAVYPSAGFEPEETLKAIENE 340
Query: 182 KCMEYL 187
+ + L
Sbjct: 341 RLISCL 346
>gi|56697375|ref|YP_167743.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56679112|gb|AAV95778.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 571
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +I + G E+ R I K+LN D INIQFTSGTTG PK A LTH N++NN+
Sbjct: 183 GEWAFGEIARMGGAEHRARLPDIDKTLNPDDPINIQFTSGTTGQPKGATLTHRNIVNNAR 242
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ R+ + D ++ + VP++H FG MG+L A++ G+ V P +F P +L + E
Sbjct: 243 FVTDRINLSERD-RLAIPVPLYHCFGMVMGVLGAVSKGAAMVFPGEAFDPAQTLDTVEAE 301
Query: 182 KC 183
+C
Sbjct: 302 RC 303
>gi|395826678|ref|XP_003786543.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 572
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGI 94
N +P A K+ LP T +++ GT L D++ E H R + L+C D I
Sbjct: 156 NAQPGALKSQRLPDLSTIISIDAPLPGTLLLDDVVAAGNTEQHLARLRHTQEFLSCHDPI 215
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KT--DHKILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN IG+RL+ KT + +++L P++H G+ G
Sbjct: 216 NIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLKLHLKTPEELRVILPSPLYHCLGSVGG 275
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + HG T ++ +P F +L AI+KE+
Sbjct: 276 TMVCVMHGVTLILSSPVFDGKKALEAISKER 306
>gi|395826680|ref|XP_003786544.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Otolemur garnettii]
Length = 602
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGI 94
N +P A K+ LP T +++ GT L D++ E H R + L+C D I
Sbjct: 186 NAQPGALKSQRLPDLSTIISIDAPLPGTLLLDDVVAAGNTEQHLARLRHTQEFLSCHDPI 245
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KT--DHKILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN IG+RL+ KT + +++L P++H G+ G
Sbjct: 246 NIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLKLHLKTPEELRVILPSPLYHCLGSVGG 305
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + HG T ++ +P F +L AI+KE+
Sbjct: 306 TMVCVMHGVTLILSSPVFDGKKALEAISKER 336
>gi|302541757|ref|ZP_07294099.1| substrate-CoA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302459375|gb|EFL22468.1| substrate-CoA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 566
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I L VP +H FG
Sbjct: 190 LSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGETVGYTEQD-RICLPVPFYHCFG 248
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A HG+ V+PAP+F P +L A+ +E+C
Sbjct: 249 MVMGNLGATTHGACIVIPAPAFDPAATLSAVEQERC 284
>gi|395826676|ref|XP_003786542.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Otolemur garnettii]
Length = 615
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGI 94
N +P A K+ LP T +++ GT L D++ E H R + L+C D I
Sbjct: 199 NAQPGALKSQRLPDLSTIISIDAPLPGTLLLDDVVAAGNTEQHLARLRHTQEFLSCHDPI 258
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KT--DHKILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN IG+RL+ KT + +++L P++H G+ G
Sbjct: 259 NIQFTSGTTGSPKGATLSHYNIVNNSNMIGERLKLHLKTPEELRVILPSPLYHCLGSVGG 318
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + HG T ++ +P F +L AI+KE+
Sbjct: 319 TMVCVMHGVTLILSSPVFDGKKALEAISKER 349
>gi|114563672|ref|YP_751185.1| AMP-binding protein [Shewanella frigidimarina NCIMB 400]
gi|114334965|gb|ABI72347.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
Length = 568
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 14/144 (9%)
Query: 53 KLTRLAL-------RMGTFR------LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
KLT LAL RMGT R +D++ E I+ SL+ D INIQFT
Sbjct: 159 KLTTLALPQLEFVIRMGTDRTPGMLNFNDLLLEVNDEAQHVLATIADSLDTHDSINIQFT 218
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A L+H+N++NN+ + + F + D K+ + VP++H FG +G L+++ H
Sbjct: 219 SGTTGSPKGATLSHHNILNNAYLVADAMGFTQAD-KLCIPVPLYHCFGMVLGSLSSIIHA 277
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
S V P SF P+ +L+ +A+E+C
Sbjct: 278 SAAVYPGESFDPLTTLQVVAQERC 301
>gi|260904720|ref|ZP_05913042.1| AMP-binding domain protein [Brevibacterium linens BL2]
Length = 564
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 42 PSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSG 101
P+ DA+ + A +GT R D++ +Y R E+++ L D INIQ+TSG
Sbjct: 156 PADLLGDAVIGERESFAHLIGTGR--DLLDDGAAKYSVRLEKLAGELAMDDPINIQYTSG 213
Query: 102 TTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161
TTG PK L+H+N++NN FIG+ L + D ++L VP +H FG +G L A++HG+
Sbjct: 214 TTGFPKGVTLSHHNILNNGFFIGELLSYSAKD-SVVLPVPYYHCFGMVIGNLAALSHGAA 272
Query: 162 TVVPAPSFKPMDSLRAIAKEKC 183
++P+P F P +L A+++EK
Sbjct: 273 IILPSPGFDPGAALSAVSEEKA 294
>gi|383642924|ref|ZP_09955330.1| AMP-binding domain protein [Streptomyces chartreusis NRRL 12338]
Length = 532
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP +H FG
Sbjct: 173 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYTEQD-RICIPVPYYHCFG 231
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF P +L A+ +E+C
Sbjct: 232 MVMGNLAATSHGACMVIPAPSFDPKATLEAVQQERC 267
>gi|149724572|ref|XP_001502813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Equus caballus]
Length = 615
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGINI 96
+P A K+ LP T + + GT L D++ E H Q K L+C D INI
Sbjct: 201 QPGALKSQRLPDLTTVILVDASLPGTLLLDDVIAAGNTEQHLAHLQHTQKFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD---KTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+H+N++NN+N IG+RL + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHHNIVNNANMIGERLRLPLKMPKELRMVLPTPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG T ++P+PSF +L AI++E+
Sbjct: 321 VSMTHGITLILPSPSFDGKKALEAISRER 349
>gi|386358405|ref|YP_006056651.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808913|gb|AEW97129.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 570
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+CR+ +NIQ+TSGTTG PK A L+H N++NN F+G+ L + + D ++ L VP +H FG
Sbjct: 205 LDCREPVNIQYTSGTTGFPKGATLSHRNILNNGYFVGELLGYTEAD-RVCLPVPFYHCFG 263
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAP F P +LRA+ E C
Sbjct: 264 MVMGNLAATSHGACVVIPAPVFDPAATLRAVRDEGC 299
>gi|386399261|ref|ZP_10084039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385739887|gb|EIG60083.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 564
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P +A LP R+ +++G T ++ AGP + + + SL
Sbjct: 146 ATAKPGQLRAARLPD--LRIVIQIGGPACPGTIPFDEVAGMAGPPHREQLAALGASLQFD 203
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +N+QFTSGTTG PK LTH+N++NN F+G+ + + D +I + VP++H FG MG
Sbjct: 204 DAVNVQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMRLTEAD-RICIPVPLYHCFGMVMG 262
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+T V P F P+ +LR I +EKC
Sbjct: 263 NLASVTLGATMVYPGEGFDPLATLRTIEQEKC 294
>gi|365866103|ref|ZP_09405729.1| AMP-binding domain protein [Streptomyces sp. W007]
gi|364004493|gb|EHM25607.1| AMP-binding domain protein [Streptomyces sp. W007]
Length = 535
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 68 DIMQGAGPEYHRRREQISKS-LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR 126
D + A P R R ++ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+
Sbjct: 158 DELTAAAPAVTRERLGAREAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGET 217
Query: 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + + D +I + VP +H FG MG L +HG+ V+P PSF+P L A+ +E+C
Sbjct: 218 IAYTQED-RICVPVPFYHCFGMVMGNLAGTSHGACIVIPGPSFEPAAVLTAVQQERC 273
>gi|406575797|ref|ZP_11051487.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
gi|404554795|gb|EKA60307.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
Length = 543
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +G ++++ G + + L D INIQ+TSGTTG PK A L+H+N
Sbjct: 150 RDVVYIGDPSWAELVAGGASVTEDQLAERGAGLTPDDPINIQYTSGTTGFPKGATLSHHN 209
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN F+G+ + + + D +I + VP +H FG MG L A +HG+ V+PAPSF+P +L
Sbjct: 210 ILNNGYFVGELIRYTEAD-RICIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFEPAATL 268
Query: 176 RAIAKEKC 183
RA+ E+C
Sbjct: 269 RAVVDERC 276
>gi|451335840|ref|ZP_21906405.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
gi|449421732|gb|EMD27139.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
Length = 552
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R Q L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D K+ +
Sbjct: 175 RLAQRQSELSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEAD-KVCIP 233
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A HG+ V+PAP+F+P +L A+A EKC
Sbjct: 234 VPFYHCFGMVMGNLAATTHGACMVIPAPAFEPKATLEAVAAEKC 277
>gi|357402331|ref|YP_004914256.1| Acyl-CoA synthetase member 2 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337768740|emb|CCB77453.1| Acyl-CoA synthetase family member 2, mitochondrial [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 544
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +GT +++ R +L+CR+ +NIQ+TSGTTG PK A L+H N
Sbjct: 147 RHTVHIGTAGWRELLAAGETVPADRTAAAQAALDCREPVNIQYTSGTTGFPKGATLSHRN 206
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN F+G+ L + + D ++ L VP +H FG MG L A +HG+ V+PAP F P +L
Sbjct: 207 ILNNGYFVGELLGYTEAD-RVCLPVPFYHCFGMVMGNLAATSHGACVVIPAPVFDPAATL 265
Query: 176 RAIAKEKC 183
RA+ E C
Sbjct: 266 RAVRDEGC 273
>gi|291454988|ref|ZP_06594378.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|421742720|ref|ZP_16180829.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
gi|291357937|gb|EFE84839.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|406688858|gb|EKC92770.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
Length = 541
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I L VP +H FG
Sbjct: 185 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGENVGYTEQD-RICLPVPFYHCFG 243
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG + A HG+ V+P P F P+ +L A+A+E+C
Sbjct: 244 MVMGNIAATTHGACIVIPGPVFDPVTTLTAVAQERC 279
>gi|359148032|ref|ZP_09181274.1| AMP-binding domain protein [Streptomyces sp. S4]
Length = 541
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I L VP +H FG
Sbjct: 185 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGENVGYTEQD-RICLPVPFYHCFG 243
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG + A HG+ V+P P F P+ +L A+A+E+C
Sbjct: 244 MVMGNIAATTHGACIVIPGPVFDPVTTLTAVAQERC 279
>gi|239991727|ref|ZP_04712391.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291448729|ref|ZP_06588119.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291351676|gb|EFE78580.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ L VP +H FG
Sbjct: 179 LSCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEAD-RVCLPVPFYHCFG 237
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+P PSF+P L A+ +E+C
Sbjct: 238 MVMGNLAATSHGACIVIPGPSFEPATVLAAVQQERC 273
>gi|417411937|gb|JAA52387.1| Putative acyl-coa synthetase family member 2 mitochondrial
precursor, partial [Desmodus rotundus]
Length = 613
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLA---LRMGTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K LP T ++ L GT L D++ E H R + L+C D +NI
Sbjct: 199 QPGALKCQRLPDLTTLISVDTLLPGTLLLEDVVAAGNTEQHLARLRHTEQFLSCYDPVNI 258
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN +GKRL+ + +I+L VP++H G+ G +
Sbjct: 259 QFTSGTTGSPKGATLSHYNIVNNSNLLGKRLKLHLKTPVEPRIILPVPLYHCMGSVAGTM 318
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG ++ +P F +L AI++E+
Sbjct: 319 VSVVHGVPLILSSPVFNGKQALEAISRER 347
>gi|348562585|ref|XP_003467090.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Cavia porcellus]
Length = 618
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 13/154 (8%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYH----RRREQISKSLNCR 91
N +P A K+ LP T ++L GT +L +++ E H RR +Q L+C
Sbjct: 202 NAQPGALKSKRLPDLTTVISLDASLPGTLQLDEVVAEGSTEQHLAQLRRTQQF---LSCY 258
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDH--KILLQVPMFHTFGT 148
D IN+QFTSGTTG PK A L+H+N++NNSN IG+RL K H +++L P++H G+
Sbjct: 259 DPINVQFTSGTTGSPKGATLSHHNIVNNSNMIGQRLRMPLKPPHELRVVLPCPLYHCLGS 318
Query: 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G + + HG T ++ +PSF +L AI++EK
Sbjct: 319 VAGTMVCVLHGVTLILSSPSFNGKKALEAISREK 352
>gi|296270056|ref|YP_003652688.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092843|gb|ADG88795.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 544
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ +L D INIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I L VP++H
Sbjct: 172 AATLTFDDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELLGYTEQD-RICLPVPLYH 230
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HGS V+PAP F P +LRA+ +E+C
Sbjct: 231 CFGMVMGNLAAASHGSCVVLPAPGFDPEATLRAVERERC 269
>gi|319950960|ref|ZP_08024832.1| AMP-binding domain protein [Dietzia cinnamea P4]
gi|319435382|gb|EFV90630.1| AMP-binding domain protein [Dietzia cinnamea P4]
Length = 549
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 73 AGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT 132
+GP +I L D INIQ+TSGTTG PK A L+H N++NN F+G+ + + +
Sbjct: 173 SGPTDADVLAEIRAGLTNHDPINIQYTSGTTGFPKGATLSHSNILNNGYFVGELINYSEV 232
Query: 133 DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D ++ + VP +H FG MG L HGS V+PAP+F P+ SL+A+ +EKC
Sbjct: 233 D-RVCIPVPFYHCFGMVMGNLACTTHGSCMVIPAPAFDPVASLKAVEQEKC 282
>gi|296140997|ref|YP_003648240.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296029131|gb|ADG79901.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 541
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ L+ D INIQ+TSGTTG PK A LTH N++NN +G+ L + + D I + VP +
Sbjct: 175 LGDQLSADDAINIQYTSGTTGFPKGATLTHRNILNNGYLVGELLNYTEQD-SICIPVPFY 233
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L A+ HG+ V+P P+F P D+L A+A EKC
Sbjct: 234 HCFGMVMGNLAAVTHGAAMVIPGPAFVPQDALAAVAAEKC 273
>gi|345002934|ref|YP_004805788.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344318560|gb|AEN13248.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 536
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 41 RPSAYKADALPTKLTRLALR----MGTFRLSDIMQGAG---PEYHRRREQISKSLNCRDG 93
R S Y+A + ALR +G D+++ + PE RE L+C D
Sbjct: 129 RSSDYRALVDQVRADCPALRAVHYIGDASWDDLVRASASVTPEQLAARE---AELSCDDP 185
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ L VP +H FG MG L
Sbjct: 186 INIQYTSGTTGFPKGATLSHHNILNNGYFVGEMVAYTEHD-RVCLPVPFYHCFGMVMGNL 244
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+ V+PAP+F+P L A+ +E+C
Sbjct: 245 GITSHGACIVIPAPAFEPAAVLEAVQRERC 274
>gi|258575305|ref|XP_002541834.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902100|gb|EEP76501.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 592
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR+E++S C N+QFTSG+TG PKAA L+HYNLINNS FIG R++F+++D +
Sbjct: 214 QRRQEELSPFDVC----NLQFTSGSTGSPKAAMLSHYNLINNSRFIGDRMDFNRSD-VLC 268
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V P +F+P LRAI+ E+C
Sbjct: 269 CPPPLFHCFGLVLGLLACITHGAKIVYPGETFEPEAVLRAISDERC 314
>gi|195473885|ref|XP_002089222.1| GE19001 [Drosophila yakuba]
gi|194175323|gb|EDW88934.1| GE19001 [Drosophila yakuba]
Length = 593
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + A +I K++ NIQFTSGTTG+PKAA L+H+N +NN
Sbjct: 201 GALRFDDFLDLANKSEREEVAKIQKNILPESPCNIQFTSGTTGNPKAACLSHHNFLNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E + +I +QVPMFH FG + I+ A+ G+T V+PA F P DSL+AI E
Sbjct: 261 HVGNRNELE--GERICVQVPMFHAFGVVITIMAALTKGATMVLPAAGFSPKDSLQAIVNE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|284989388|ref|YP_003407942.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284062633|gb|ADB73571.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 551
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
RRE L+ D INIQ+TSGTTG PK A LTH+NL+NN F+G+ + + D +I +
Sbjct: 177 RRE---AELSADDPINIQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEAD-RICIP 232
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+T V+PAP F P +LRA+ E+C
Sbjct: 233 VPYYHCFGMGMGNLAATSHGATMVIPAPGFDPAATLRAVQDERC 276
>gi|411007068|ref|ZP_11383397.1| AMP-binding domain protein [Streptomyces globisporus C-1027]
Length = 535
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Query: 81 REQISK---SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
R+Q++ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++
Sbjct: 169 RDQLAAREAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEAD-RVC 227
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L VP +H FG MG L +HG+ V+P PSF+P L A+ +E+C
Sbjct: 228 LPVPFYHCFGMVMGNLACTSHGACIVIPGPSFEPATVLAAVQQERC 273
>gi|376261461|ref|YP_005148181.1| acyl-CoA synthetase [Clostridium sp. BNL1100]
gi|373945455|gb|AEY66376.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
sp. BNL1100]
Length = 554
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
N P ++ ++ LP +++ G F DI++ IS SL+C D I
Sbjct: 134 NSEPGSFHSEKLPYLKNIISVSTEKHPGMFSWDDIIEFGRDISDEELYNISNSLDCHDVI 193
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+Q+TSGTTG PK LTHYN+INN IG + F D K+ + VP FH FG + I+
Sbjct: 194 NMQYTSGTTGFPKGVMLTHYNIINNGMCIGDCMHFTHED-KLCIPVPFFHCFGLVLAIMA 252
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG TT+VP + P+ + AI E+C
Sbjct: 253 CVTHG-TTMVPVDYYSPLKVMNAIQSERC 280
>gi|351713573|gb|EHB16492.1| Acyl-CoA synthetase family member 2, mitochondrial [Heterocephalus
glaber]
Length = 578
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGINI 96
+P A K+ LP T ++L GT L +++ E H + Q +SL+C D INI
Sbjct: 164 QPGALKSKRLPDLTTVISLDTPLPGTLLLDEVVATGSTEQHLAQLQHTQQSLSCYDPINI 223
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+H+N++NNSN IG RL + +++L P++H G+ G +
Sbjct: 224 QFTSGTTGSPKGATLSHHNIVNNSNLIGHRLRMPLKPPQELRLVLPSPLYHCLGSVGGTM 283
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M HGST ++ +PSF +L AI++EK
Sbjct: 284 VCMLHGSTLLLSSPSFSGKKALEAISREK 312
>gi|77360337|ref|YP_339912.1| AMP-binding protein [Pseudoalteromonas haloplanktis TAC125]
gi|76875248|emb|CAI86469.1| putative long-chain-fatty-acid-CoA ligase [Pseudoalteromonas
haloplanktis TAC125]
Length = 577
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 47 ADALPT--KLTRLALRM--GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGT 102
A ALPT + R+ G F +++ A E+ ++ + ++ +LNC INIQFTSGT
Sbjct: 170 AAALPTLKNVIRIGDEASPGMFSFAEVTALATQEHKQQLDSVAATLNCNQDINIQFTSGT 229
Query: 103 TGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162
TG+PK A LTH N++NN+ F+G+ + D KI + VP++H FG +G L +M+ G+T
Sbjct: 230 TGNPKGATLTHKNILNNALFVGEAMHITNKD-KICIPVPLYHCFGMVLGSLVSMSKGATA 288
Query: 163 VVPAPSFKPMDSLRAIAKEKC 183
V P +F P +L + E C
Sbjct: 289 VYPGDAFDPKTTLEVVQNEGC 309
>gi|456388153|gb|EMF53643.1| long-chain-fatty-acid-CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 530
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D +I + VP +H
Sbjct: 171 EDLSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGESLAYTERD-RICVPVPFYHC 229
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF +L A+ +E+C
Sbjct: 230 FGMVMGNLAATSHGACVVIPAPSFDARATLEAVQRERC 267
>gi|194856653|ref|XP_001968796.1| GG24306 [Drosophila erecta]
gi|190660663|gb|EDV57855.1| GG24306 [Drosophila erecta]
Length = 593
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + A +I K++ NIQFTSGTTG+PKAA LTH N +NN
Sbjct: 201 GALRFDDFLDLANKSEREEVAKIQKNILPESPCNIQFTSGTTGNPKAACLTHNNFVNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E + +I +QVPMFH FG + I+ A+ G+T V+PA F P DSL+AI E
Sbjct: 261 HVGNRNELE--GERICVQVPMFHAFGVIISIMAALTKGATMVLPAAGFSPKDSLQAIINE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|340789441|ref|YP_004754906.1| long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331]
gi|340554708|gb|AEK64083.1| Long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331]
Length = 564
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 42 PSAYKADALPTKLTRLALRMG----TFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQ 97
P A +A LP T + L G R +D++ +G R +I L D INIQ
Sbjct: 150 PGALQAARLPAMKTVIQLGSGEAPGMLRFADLI-ASGDAADPRLAEIGARLQASDPINIQ 208
Query: 98 FTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
FTSGTTG PK A LTH N++NN FIG+ ++ D ++ + VP++H FG +G L +
Sbjct: 209 FTSGTTGFPKGATLTHRNILNNGFFIGEAMKLTAQD-RLCIPVPLYHCFGMVLGNLACLT 267
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
HG+T V P F+P+ L+A+ +E+C
Sbjct: 268 HGATIVYPNDGFEPLSVLQAVQEERC 293
>gi|344285395|ref|XP_003414447.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Loxodonta africana]
Length = 615
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K+ LP T +++ GT L ++++ E H + + ++ L+C D INI
Sbjct: 201 QPGALKSQRLPDLTTLISIDEPLPGTLLLKEVVEAGSSEQHMAQLRYAQQFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHKI--LLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG+RL+ K KI +L P++H G+ G +
Sbjct: 261 QFTSGTTGTPKGATLSHYNIVNNSNMIGERLKMHLKKPEKIRMVLPCPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG+T ++ +PSF L AI+KEK
Sbjct: 321 VSVMHGTTLILSSPSFNGKMVLEAISKEK 349
>gi|291405797|ref|XP_002719337.1| PREDICTED: acyl-CoA synthetase family member 2 [Oryctolagus
cuniculus]
Length = 615
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L D++ + H + + L+C D +NI
Sbjct: 201 QPGALKSQRLPDLTTVISVDAPLPGTLLLDDVVAAGSTQQHLAQLRHTQQFLSCHDPVNI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD---KTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG+RL + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNSNMIGERLRMPVKMPAEKRVVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M HG+T ++ +PSF +L AI++EK
Sbjct: 321 VCMMHGATLLLSSPSFDGKKALEAISREK 349
>gi|170028421|ref|XP_001842094.1| AMP dependent coa ligase [Culex quinquefasciatus]
gi|167874249|gb|EDS37632.1| AMP dependent coa ligase [Culex quinquefasciatus]
Length = 609
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF + ++++ + + E + + G + TSGTTG PK A L+H+ L+NN+
Sbjct: 220 GTFSMFELLELPTEQQIKNIESMQTRICPDSGACMLLTSGTTGQPKVALLSHFGLVNNAT 279
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+R E D DH++ + VP+FH FG G+ + +N+GST V+P+ FK DSL+AI KE
Sbjct: 280 QAARRNELDTKDHRVCVHVPLFHAFGLVFGVFSTLNYGSTMVLPSAGFKGSDSLKAINKE 339
Query: 182 KC 183
KC
Sbjct: 340 KC 341
>gi|359430350|ref|ZP_09221361.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
gi|358234207|dbj|GAB02900.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
Length = 564
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ + + + S+ L + INIQFTSGTTG+PK LTH+N++NN
Sbjct: 174 GIHRFSDLVTPPTADQLDQLDLASQQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D K+ + VP+FH FG MG L + HG+T V P+ F P+D+L+ I +E
Sbjct: 234 FVGEGIRLTSKD-KVCISVPLFHCFGMVMGNLACITHGATMVYPSAVFNPLDTLKTIHEE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|452949082|gb|EME54553.1| AMP-binding domain protein [Amycolatopsis decaplanina DSM 44594]
Length = 552
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D K+ + VP +H FG
Sbjct: 183 LSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEAD-KVCIPVPFYHCFG 241
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A HG+ V+PAP+F+P +L A+A EKC
Sbjct: 242 MVMGNLAATTHGACMVIPAPAFEPKATLEAVAAEKC 277
>gi|357410305|ref|YP_004922041.1| AMP-dependent synthetase/ligase [Streptomyces flavogriseus ATCC
33331]
gi|320007674|gb|ADW02524.1| AMP-dependent synthetase and ligase [Streptomyces flavogriseus ATCC
33331]
Length = 535
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ L VP +H FG
Sbjct: 179 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGEMVAYTEED-RVCLPVPFYHCFG 237
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L +HG+ V+PAP+F+P L A+ +E+C
Sbjct: 238 MVMGNLGITSHGACIVIPAPAFEPAAVLAAVERERC 273
>gi|312372157|gb|EFR20178.1| hypothetical protein AND_20527 [Anopheles darlingi]
Length = 380
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 90 CRD-GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGT 148
C D G+N+QFTSGTTG PKAA ++H+ +NN IG+R E ++ + ++ +QVP+FH FG
Sbjct: 109 CPDAGVNLQFTSGTTGAPKAALMSHFGFVNNGLHIGERNELNRKEQRMCVQVPLFHAFGM 168
Query: 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187
+ I+ +++GST V+P+ FK DSL AI +E+C L
Sbjct: 169 VIAIMTGISYGSTVVLPSAGFKAADSLAAIMRERCTVIL 207
>gi|294632131|ref|ZP_06710691.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835464|gb|EFF93813.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 541
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++ + VP +H
Sbjct: 173 AAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELIAYSEQD-RVCVPVPFYH 231
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ VVPA SF P +L A+ +E+C
Sbjct: 232 CFGMVMGNLAATSHGACLVVPAASFDPAATLEAVQRERC 270
>gi|358638274|dbj|BAL25571.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 584
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ P KA LPT + +RMG +++ + E + L
Sbjct: 166 AQAEPGKLKAAKLPT--LEIVIRMGADKTHGMLNFDELLHAPSRDELDALETLGDELQFD 223
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP++H FG MG
Sbjct: 224 DPINIQFTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGD-RLCIPVPLYHCFGMVMG 282
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + HG+T + PA SF+P+ +L +A+E+C
Sbjct: 283 NLGCLTHGATMIYPAESFEPLATLETLAEERC 314
>gi|295835793|ref|ZP_06822726.1| AMP-binding enzyme [Streptomyces sp. SPB74]
gi|295825696|gb|EFG64403.1| AMP-binding enzyme [Streptomyces sp. SPB74]
Length = 544
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 68 DIMQGAGPEYHRRREQISKS-LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR 126
D + AG + R R + ++ L+C D +N+Q+TSGTTG PK A L+H+NL+NN ++G+
Sbjct: 164 DALVTAGTDVPRARLRAREAELSCDDPVNLQYTSGTTGFPKGATLSHHNLLNNGFWVGET 223
Query: 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + + D ++ L VP FH FG MG L A +HG+ V+PAP+F +L A+ KE+C
Sbjct: 224 IGYTEHD-RVCLPVPFFHCFGMVMGNLGATSHGACVVIPAPAFDARATLEAVEKERC 279
>gi|444430996|ref|ZP_21226167.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443888045|dbj|GAC67888.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 548
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E+I ++L D INIQ+TSGTTG PK A L+H N++NN F+G+ + + D +I + VP
Sbjct: 178 EEIGQTLAPDDAINIQYTSGTTGFPKGATLSHRNILNNGYFVGELVHY-TPDDRICVPVP 236
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A+ H + V+PAP+F P +LRA+A E C
Sbjct: 237 FYHCFGMVMGNLAALTHAARIVIPAPAFDPAATLRAVADEHC 278
>gi|318057799|ref|ZP_07976522.1| AMP-binding domain protein [Streptomyces sp. SA3_actG]
gi|318080550|ref|ZP_07987882.1| AMP-binding domain protein [Streptomyces sp. SA3_actF]
Length = 544
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +N+Q+TSGTTG PK A L+H+NL+NN ++G+ + + +D ++ L VP FH FG
Sbjct: 185 LSCDDPVNLQYTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPSD-RVCLPVPFFHCFG 243
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF+ +L A+ KE+C
Sbjct: 244 MVMGNLGATSHGACIVIPAPSFEARATLEAVEKERC 279
>gi|183983827|ref|YP_001852118.1| AMP-binding protein [Mycobacterium marinum M]
gi|183177153|gb|ACC42263.1| fatty-acid-CoA ligase FadD35 [Mycobacterium marinum M]
Length = 547
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++I+ +L+ D INIQ+TSGTTG PK L+H N++NN +G+ LE+ D +I + VP
Sbjct: 179 QEIATTLSADDPINIQYTSGTTGFPKGVTLSHRNILNNGYLVGELLEYTAED-RICIPVP 237
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 238 FYHCFGMVMGNLAATSHGACMVIPAPGFDPAATLRAVQAERC 279
>gi|452001200|gb|EMD93660.1| hypothetical protein COCHEDRAFT_1223335 [Cochliobolus
heterostrophus C5]
Length = 587
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG PKAA LTHYNLINNS FIG R++ +D + P+FH FG +G
Sbjct: 223 DVANLQFTSGSTGKPKAAMLTHYNLINNSRFIGDRMQLSPSD-TLCCPPPLFHCFGLTLG 281
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HGST V PA +F P +RAI+ E C
Sbjct: 282 VLAVLTHGSTIVFPAEAFDPAACMRAISTENC 313
>gi|302522672|ref|ZP_07275014.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
gi|302431567|gb|EFL03383.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
Length = 538
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +N+Q+TSGTTG PK A L+H+NL+NN ++G+ + + +D ++ L VP FH FG
Sbjct: 179 LSCDDPVNLQYTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPSD-RVCLPVPFFHCFG 237
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF+ +L A+ KE+C
Sbjct: 238 MVMGNLGATSHGACIVIPAPSFEARATLEAVEKERC 273
>gi|182435126|ref|YP_001822845.1| AMP-binding protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463642|dbj|BAG18162.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 535
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Query: 81 REQISK---SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
+EQ++ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++
Sbjct: 169 QEQLAAREAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEAD-RVC 227
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L VP +H FG MG L +HG+ V+P PSF+P L A+ +E+C
Sbjct: 228 LPVPFYHCFGMVMGNLACTSHGACIVIPGPSFEPGAVLTAVQQERC 273
>gi|262369650|ref|ZP_06062978.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
gi|262315718|gb|EEY96757.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
Length = 562
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ + E ++ + INIQFTSGTTG+PK LTH N++NN
Sbjct: 174 GLHRFSDLLTPPSKRQLNQLELVASESQFDETINIQFTSGTTGNPKGTMLTHNNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEAIHLSPAD-RVCISVPLFHCFGMVMGNLACITHGSTMVYPSAVFNPLETLKAIQQE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|326775763|ref|ZP_08235028.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
gi|326656096|gb|EGE40942.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
Length = 535
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
Query: 81 REQISK---SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
+EQ++ L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D ++
Sbjct: 169 QEQLAAREAELSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGETIAYTEAD-RVC 227
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L VP +H FG MG L +HG+ V+P PSF+P L A+ +E+C
Sbjct: 228 LPVPFYHCFGMVMGNLACTSHGACIVIPGPSFEPGAVLTAVQQERC 273
>gi|335419331|ref|ZP_08550386.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|335420996|ref|ZP_08552026.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334893170|gb|EGM31388.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
gi|334896948|gb|EGM35090.1| AMP-binding domain protein [Salinisphaera shabanensis E1L3A]
Length = 566
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G D+ AGP R E+++ L D INIQFTSGTTG PK A L+H+N++NN
Sbjct: 174 GMLNFDDLPARAGPADAARVEELAGLLQADDPINIQFTSGTTGRPKGATLSHHNILNNGL 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D +I + VP++H FG MG L A+ HG+ V PAPSF+P +L A A E
Sbjct: 234 FVGEGMGL-TADDRIAVPVPLYHCFGMVMGNLGALTHGAAVVYPAPSFEPTATLEAAAAE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|392953699|ref|ZP_10319253.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
gi|391859214|gb|EIT69743.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
Length = 582
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 47 ADALPTKLTRL----ALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGT 102
A LPT T + A R G R D+ Q A P + + SL+ R INIQFTSGT
Sbjct: 169 AARLPTLKTVIKIGGAPRAGWLRFDDLPQLARPVQVAKLLALQPSLHARQAINIQFTSGT 228
Query: 103 TGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162
TG PK A L+H N++NN F+G ++ + D ++ + VP++H FG MG L + G+T
Sbjct: 229 TGSPKGATLSHRNILNNGYFVGASMDLREGD-RLCIPVPLYHCFGMVMGNLACITRGATM 287
Query: 163 VVPAPSFKPMDSLRAIAKEKC 183
+ PAP+F + +L+AI E+C
Sbjct: 288 IYPAPTFDALATLKAIESERC 308
>gi|418461131|ref|ZP_13032210.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
gi|359738785|gb|EHK87666.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
Length = 547
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ SL+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ ++ + D +I L VP
Sbjct: 177 RVQASLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGQLCDYTEED-RICLPVPF 235
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAP+F P +L A+ E+C
Sbjct: 236 YHCFGMVMGNLAATSHGACMVIPAPAFDPRATLEAVQAERC 276
>gi|381163253|ref|ZP_09872483.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
gi|379255158|gb|EHY89084.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
Length = 547
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ SL+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ ++ + D +I L VP
Sbjct: 177 RVQASLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGQLCDYTEED-RICLPVPF 235
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAP+F P +L A+ E+C
Sbjct: 236 YHCFGMVMGNLAATSHGACMVIPAPAFDPRATLEAVQAERC 276
>gi|217969185|ref|YP_002354419.1| AMP-binding domain-containing protein [Thauera sp. MZ1T]
gi|217506512|gb|ACK53523.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 576
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P ++ LP+ + +RMG D+++ E +S+ L D IN
Sbjct: 162 PGLLRSHRLPS--LEMVIRMGAEKSPGMMSFDDLLRAPSREELTALAVLSEKLQFDDPIN 219
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTGHPK A L+H+N++NN F+G+ ++ D ++ + VP++H FG MG L
Sbjct: 220 IQFTSGTTGHPKGATLSHHNILNNGFFVGEAIKLMPGD-RLCIPVPLYHCFGMVMGNLGC 278
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V P +F+P+ L +A+EKC
Sbjct: 279 LTHGATMVYPGEAFEPLAVLETVAQEKC 306
>gi|257057367|ref|YP_003135199.1| AMP-binding domain-containing protein [Saccharomonospora viridis
DSM 43017]
gi|256587239|gb|ACU98372.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora viridis DSM 43017]
Length = 552
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L D + A PE R + +L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+
Sbjct: 164 LLDTGRKADPE---RLARAQAALSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGE 220
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + D +I L VP +H FG MG L A HG+ V+PAPSF P +L A+ E+C
Sbjct: 221 LCRYTEVD-RICLPVPFYHCFGMVMGNLAATTHGACMVIPAPSFDPAKTLAAVQAERC 277
>gi|386843340|ref|YP_006248398.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103641|gb|AEY92525.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796631|gb|AGF66680.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 530
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + + D +I + VP +H FG
Sbjct: 174 LSCDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGESIAYTEQD-RICIPVPFYHCFG 232
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PA SF P +L A+ +E+C
Sbjct: 233 MVMGNLAATSHGACMVIPARSFDPAATLEAVQRERC 268
>gi|395536747|ref|XP_003770373.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Sarcophilus harrisii]
Length = 543
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 44 AYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTS 100
A ++ LP T + L GTF ++D++Q + + I +SL+C D INIQFTS
Sbjct: 138 ALRSKNLPELTTVIVLDSKLPGTFHMNDVLQAGKTAQLAQLKDIQRSLSCHDPINIQFTS 197
Query: 101 GTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160
GTTG PK A L+H+N++NN+ FIG+R+ + +++L P++H G+ G + ++ +G
Sbjct: 198 GTTGSPKGATLSHHNIVNNAIFIGERMNLRNKEPRLVLPSPLYHCLGSVGGTMVSILYGV 257
Query: 161 TTVVPAPSFKPMDSLRAIAKEK 182
T ++ +PSF+ +L A+ +E+
Sbjct: 258 TLILSSPSFEGKRALEAVTQER 279
>gi|260806739|ref|XP_002598241.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
gi|229283513|gb|EEN54253.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
Length = 551
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQISK 86
+I P ES P K LP T + L GT+ +++ + R ++
Sbjct: 134 QICPELESC-NPGELKTRNLPMLETVIKLGEEKFPGTYSFPEVLDMGDHAHMRTVLEMQD 192
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
L D INIQFTSGTTG+PK A LTH+N++NN FIG RL F + I + VP++H F
Sbjct: 193 KLQFDDPINIQFTSGTTGNPKGATLTHHNILNNQWFIGHRLGFHEKVRSICMPVPLYHCF 252
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G G L A G+T V PAPSF+P L+AI +E+
Sbjct: 253 GMVGGALAAGVFGTTVVTPAPSFEPEPCLQAIQEER 288
>gi|255318758|ref|ZP_05359984.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|421855790|ref|ZP_16288165.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255304014|gb|EET83205.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|403188799|dbj|GAB74366.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 561
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
D++ E + + I + L + INIQFTSGTTG+PK LTH N++NN F+G+
Sbjct: 178 FDDLLTSPTSEQLQALQNIGQELQFDETINIQFTSGTTGNPKGTMLTHNNILNNGYFVGE 237
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ D ++ + VP+FH FG MG L + HGS V P F P+ SL+AI +EKC
Sbjct: 238 RILLTPQD-RVCISVPLFHCFGMVMGNLACVTHGSAMVYPCDVFNPLSSLKAIEQEKC 294
>gi|379734139|ref|YP_005327644.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
gi|378781945|emb|CCG01599.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
Length = 551
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A LTH+NL+NN F+G+ + + D ++ + VP +H FG
Sbjct: 182 LSADDPINIQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEAD-RVCIPVPYYHCFG 240
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+T ++PAP F P +LRA+ E+C
Sbjct: 241 MGMGNLGATSHGATMIIPAPGFDPALTLRAVQDERC 276
>gi|262378975|ref|ZP_06072132.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|262300260|gb|EEY88172.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 561
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
D++ E + + I + L + INIQFTSGTTG+PK LTH N++NN F+G+
Sbjct: 178 FDDLLTSPTSEQLQALQNIGQELQFDETINIQFTSGTTGNPKGTMLTHNNILNNGYFVGE 237
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ D ++ + VP+FH FG MG L + HGS V P F P+ SL+AI +EKC
Sbjct: 238 RILLTPQD-RVCISVPLFHCFGMVMGNLACVTHGSAMVYPCDVFNPLSSLKAIEQEKC 294
>gi|421466015|ref|ZP_15914701.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
gi|400203526|gb|EJO34512.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
Length = 561
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
D++ E + + I + L + INIQFTSGTTG+PK LTH N++NN F+G+
Sbjct: 178 FDDLLTSPTSEQLQALQNIGQELQFDETINIQFTSGTTGNPKGTMLTHNNILNNGYFVGE 237
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ D ++ + VP+FH FG MG L + HGS V P F P+ SL+AI +EKC
Sbjct: 238 RILLTPQD-RVCISVPLFHCFGMVMGNLACVTHGSAMVYPCDVFNPLSSLKAIEQEKC 294
>gi|350590439|ref|XP_003131621.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Sus
scrofa]
Length = 615
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP +++ GT L D++ E H + K L+C D INI
Sbjct: 201 KPGALKSQRLPDLTIVISVDTPLPGTLLLDDVVAAGNQEQHLAQLRHTQKFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHK--ILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG+RL+ KT K ++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNSNMIGERLQLSQKTAEKSRMVLPTPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F +L AI++E+
Sbjct: 321 VSLMHGVTLILSSPVFDGKKALEAISRER 349
>gi|421501703|ref|ZP_15948660.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
gi|400347446|gb|EJO95799.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
Length = 563
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RRR+ L D INIQ+TSGTTG PK A L+HYN++NN +G+ L + D ++++
Sbjct: 192 RRRQ---AQLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLSEQD-RMVI 247
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
VP++H FG MG L M HGST + P P+F+P+ +L+A+A+E+
Sbjct: 248 PVPLYHCFGMVMGNLGCMTHGSTMIYPGPAFEPLSTLQAVAEER 291
>gi|359451343|ref|ZP_09240747.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
gi|358042834|dbj|GAA76996.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
Length = 577
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 47 ADALPT--KLTRLA--LRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGT 102
A ALP + R+ + G F SDIM+ A P + I+ +LN INIQFTSGT
Sbjct: 170 AKALPNLKNVIRIGNEVSAGMFSFSDIMRMATPAHELELNAIAANLNAEQDINIQFTSGT 229
Query: 103 TGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162
TG+PK A LTH N++NN+ F+G + F + D K+ + VP++H FG +G L + G+
Sbjct: 230 TGNPKGATLTHKNILNNALFVGDSMHFTEHD-KLCIPVPLYHCFGMVLGSLLCVTKGAAA 288
Query: 163 VVPAPSFKPMDSLRAIAKEKC 183
+ P+ SF +L I +E C
Sbjct: 289 IYPSDSFDAKTTLDVIEQEGC 309
>gi|110678441|ref|YP_681448.1| long chain fatty acid acyl-CoA ligase [Roseobacter denitrificans
OCh 114]
gi|109454557|gb|ABG30762.1| putative long chain fatty acid acyl-CoA ligase [Roseobacter
denitrificans OCh 114]
Length = 565
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+QIS L+ +D INIQFTSGTTG PK A LTH+N++NN++F+ + ++F + D ++ + VP
Sbjct: 200 DQISNDLSPQDAINIQFTSGTTGSPKGACLTHHNIVNNAHFVTQTMQFTEAD-RLCIPVP 258
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L ++ G+T V+P F +L A+ +EKC
Sbjct: 259 FYHCFGMVMGTLGCVSKGATMVIPGEGFDARTTLEAVTREKC 300
>gi|195433499|ref|XP_002064748.1| GK15099 [Drosophila willistoni]
gi|194160833|gb|EDW75734.1| GK15099 [Drosophila willistoni]
Length = 588
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 62 GTFRLSDIM----QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
G R D++ + E + + +IS L C NIQFTSGTTG+PKAA L+HYN +
Sbjct: 202 GALRFDDLLDLSNRTEQEEIGKYQTKISPELPC----NIQFTSGTTGNPKAASLSHYNFV 257
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN +G R + + +I +QVP+FH FG + I+ M+ G+T V+PA F P DSL A
Sbjct: 258 NNGIHVGNRNQLE--GERICVQVPLFHAFGVIITIMAGMSKGATLVLPAAGFSPKDSLAA 315
Query: 178 IAKEKC 183
I KEKC
Sbjct: 316 IVKEKC 321
>gi|157130156|ref|XP_001661846.1| AMP dependent coa ligase [Aedes aegypti]
gi|108872002|gb|EAT36227.1| AAEL011677-PA [Aedes aegypti]
Length = 578
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++M+ + E I +++ G+N+Q+TSGTTG PKAA L+H+N INN+
Sbjct: 190 GTISYEELMKTVSEKDITYVESIQHNISPDSGVNLQYTSGTTGQPKAALLSHFNFINNAI 249
Query: 122 FIGKRLEFDKTDH-KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+G F+ T++ ++ +QVP FH FG GIL +++HG VVP P + P S++AI
Sbjct: 250 SLGLEHGFNLTENNRVCIQVPFFHVFGVVTGILGSISHGCALVVPGPGYNPSASVQAIVS 309
Query: 181 EKC 183
E+C
Sbjct: 310 ERC 312
>gi|198476768|ref|XP_002132442.1| GA25183 [Drosophila pseudoobscura pseudoobscura]
gi|198137844|gb|EDY69844.1| GA25183 [Drosophila pseudoobscura pseudoobscura]
Length = 594
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + A ++ + NIQFTSGTTG PKAA L+HYN +NN
Sbjct: 201 GALRFDDCLDLASSSEREEIGKLQTKICPESACNIQFTSGTTGSPKAAALSHYNFVNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R + + +I +QVP+FH FG + I+ ++ G+T V+PA F P DSL+AI KE
Sbjct: 261 HVGTRNQLE--GERICVQVPLFHAFGVVITIMAGLSKGATLVLPAAGFSPKDSLQAIVKE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|195118066|ref|XP_002003561.1| GI21922 [Drosophila mojavensis]
gi|193914136|gb|EDW13003.1| GI21922 [Drosophila mojavensis]
Length = 598
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D++ + + ++ + + N+QFTSGTTG+PKAA L+H+N +NN
Sbjct: 202 GALRFDDVLGFSNADEQAEISKLQRHILPESPCNVQFTSGTTGNPKAAVLSHHNFVNNGI 261
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+GKR E +I +QVP+FH FG + I+ +M G+T V+PA F P DSL+AI KE
Sbjct: 262 HVGKRNEI--AGERICVQVPLFHAFGVVITIMASMATGATIVLPAAGFSPEDSLKAIIKE 319
Query: 182 KC 183
KC
Sbjct: 320 KC 321
>gi|386849494|ref|YP_006267507.1| AMP-binding protein [Actinoplanes sp. SE50/110]
gi|359836998|gb|AEV85439.1| AMP-binding domain protein [Actinoplanes sp. SE50/110]
Length = 544
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ I +L+ D INIQ+TSGTTG PK A L+H N++NN +G+ +++ D +I + VP
Sbjct: 173 DAIGGTLHPDDPINIQYTSGTTGFPKGATLSHRNILNNGFLVGELIDYTAAD-RICIPVP 231
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAP F P +LRA+A+EKC
Sbjct: 232 FYHCFGMVMGNLAATSHGAAMVIPAPGFDPALTLRAVAEEKC 273
>gi|195155513|ref|XP_002018648.1| GL25909 [Drosophila persimilis]
gi|194114801|gb|EDW36844.1| GL25909 [Drosophila persimilis]
Length = 594
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R D + A ++ + NIQFTSGTTG PKAA L+HYN +NN
Sbjct: 201 GALRFDDCLDLASSSEREEIGKLQTKICPESACNIQFTSGTTGSPKAAALSHYNFVNNGI 260
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R + + +I +QVP+FH FG + I+ ++ G+T V+PA F P DSL+AI KE
Sbjct: 261 HVGTRNQLE--GERICVQVPLFHAFGVVITIMAGLSKGATLVLPAAGFSPKDSLQAIVKE 318
Query: 182 KC 183
KC
Sbjct: 319 KC 320
>gi|119472994|ref|ZP_01614829.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
gi|119444614|gb|EAW25925.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
Length = 577
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 47 ADALPT--KLTRLA--LRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGT 102
A ALP + R+ + G F SDIM+ A P + I+ +LN INIQFTSGT
Sbjct: 170 AKALPNLKNVIRIGNEVSAGMFSFSDIMRMATPAHELELNAIAANLNAEQDINIQFTSGT 229
Query: 103 TGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162
TG+PK A LTH N++NN+ F+G + F + D K+ + VP++H FG +G L + G+
Sbjct: 230 TGNPKGATLTHKNILNNALFVGDSMHFTEHD-KLCIPVPLYHCFGMVLGSLLCVTKGAAA 288
Query: 163 VVPAPSFKPMDSLRAIAKEKC 183
+ P+ SF +L I +E C
Sbjct: 289 IYPSDSFDAKTTLDVIEQEGC 309
>gi|381196620|ref|ZP_09903962.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
lwoffii WJ10621]
Length = 562
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ + E ++ + INIQFTSGTTG+PK LTH N++NN
Sbjct: 174 GLHRFSDLLTPPSKRQLNQLELVASESQFDETINIQFTSGTTGNPKGTMLTHNNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++ + VP+FH FG MG L + HGST V P+ F P+++L+AI +E
Sbjct: 234 FVGEAIHLSPAD-RVCISVPLFHCFGMVMGNLACITHGSTMVHPSAVFNPLETLKAIQQE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|333023626|ref|ZP_08451690.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
gi|332743478|gb|EGJ73919.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
Length = 544
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+C D +N+Q+TSGTTG PK A L+H+NL+NN ++G+ + + D ++ L VP FH FG
Sbjct: 185 LSCDDPVNLQYTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPRD-RVCLPVPFFHCFG 243
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAPSF+ +L A+ KE+C
Sbjct: 244 MVMGNLGATSHGACIVIPAPSFEARATLEAVEKERC 279
>gi|407274853|ref|ZP_11103323.1| AMP-binding domain protein [Rhodococcus sp. P14]
Length = 552
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + + L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D K+ +
Sbjct: 180 RLDAAQRDLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTEQD-KVCIP 238
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +HG+T V+P P+F P +L A+A+E+C
Sbjct: 239 VPFYHCFGMVMGNLACTSHGATMVIPGPAFDPAQTLAAVAEERC 282
>gi|301620513|ref|XP_002939621.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 846
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF D+M+ P + + + K + C D INIQFTSGTTG PK A L+H+N++NN++
Sbjct: 213 GTFLFQDVMEAGNPSSVLQLQDLQKQITCDDPINIQFTSGTTGSPKGATLSHHNIVNNAS 272
Query: 122 FIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
G+R+ F+ + + + VP++H G+ +G + +G+T V P+P + P L AI+
Sbjct: 273 LGGRRMGFNWRKGVRTAIPVPLYHCLGSVIGGMVMAVYGTTLVFPSPGYDPRALLEAISN 332
Query: 181 EKC 183
EKC
Sbjct: 333 EKC 335
>gi|451855023|gb|EMD68315.1| hypothetical protein COCSADRAFT_108689 [Cochliobolus sativus
ND90Pr]
Length = 587
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG PKAA LTHYNLINNS FIG R++ +D + P+FH FG +G
Sbjct: 223 DVANLQFTSGSTGKPKAAMLTHYNLINNSRFIGDRMQLSPSD-TLCCPPPLFHCFGLTLG 281
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HGST V PA +F P + AIA E C
Sbjct: 282 VLAVLTHGSTIVFPAEAFDPAACMNAIAAENC 313
>gi|118353812|ref|XP_001010171.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291938|gb|EAR89926.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 606
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+++ + +N D NIQFTSGTTG+PK A LTH N++NN FIG+RL + D +I L VP
Sbjct: 193 QKVMEQINPNDPTNIQFTSGTTGYPKGATLTHNNILNNGYFIGERLSYSPQD-RICLSVP 251
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L A+N G+T V+P+ F +L A+ K KC
Sbjct: 252 LYHCFGMVLGNLAALNFGATIVLPSEGFNAQKALEAVTKHKC 293
>gi|91974734|ref|YP_567393.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
BisB5]
gi|91681190|gb|ABE37492.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 564
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
S +P A ++ LP R +++G T D+ Q G + ++ L
Sbjct: 146 SQSQPGALQSSKLPH--LRAVIQIGGPKCPGTVAFDDLAQMGGARHREALAALAGRLQFD 203
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQFTSGTTG PK LTH+N++NN F+G+ ++ + D +I + VP++H FG MG
Sbjct: 204 DAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMKLTEQD-RICIPVPLYHCFGMVMG 262
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L A+ G+T V P F P+ +L+ ++EKC
Sbjct: 263 NLAAVTSGATMVYPGEGFDPLATLQTASREKC 294
>gi|355568519|gb|EHH24800.1| hypothetical protein EGK_08523, partial [Macaca mulatta]
Length = 639
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGI 94
N +P A K+ LP T +++ GT L +++ + H + Q I + L+C D I
Sbjct: 223 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPI 282
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 283 NIQFTSGTTGSPKGATLSHYNIVNNSSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 342
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 343 TMMCLMYGATLILASPVFNGKKALEAISRER 373
>gi|264676637|ref|YP_003276543.1| AMP-dependent synthetase/ligase [Comamonas testosteroni CNB-2]
gi|262207149|gb|ACY31247.1| AMP-dependent synthetase and ligase [Comamonas testosteroni CNB-2]
Length = 587
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S +M G R + I+ +L+ RD INIQFTSGTTG PK A LTH N++NN
Sbjct: 197 GMLRFSQLM-AQGTSADERIDAIAATLSNRDPINIQFTSGTTGFPKGATLTHRNILNNGF 255
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGST V P F P+ L A+ E
Sbjct: 256 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSTIVYPNDGFDPITVLEAVQAE 314
Query: 182 KC 183
KC
Sbjct: 315 KC 316
>gi|452957124|gb|EME62502.1| AMP-binding domain protein, partial [Rhodococcus ruber BKS 20-38]
Length = 293
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + + L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D K+ +
Sbjct: 180 RLDAAQRDLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTEQD-KVCIP 238
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +HG+T V+P P+F P +L A+A+E+C
Sbjct: 239 VPFYHCFGMVMGNLACTSHGATMVIPGPAFDPTQTLAAVAEERC 282
>gi|299529445|ref|ZP_07042882.1| AMP-binding domain protein [Comamonas testosteroni S44]
gi|298722308|gb|EFI63228.1| AMP-binding domain protein [Comamonas testosteroni S44]
Length = 582
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S +M G R + I+ +L+ RD INIQFTSGTTG PK A LTH N++NN
Sbjct: 192 GMLRFSQLM-AQGTSADERIDAIAATLSNRDPINIQFTSGTTGFPKGATLTHRNILNNGF 250
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGST V P F P+ L A+ E
Sbjct: 251 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSTIVYPNDGFDPITVLEAVQAE 309
Query: 182 KC 183
KC
Sbjct: 310 KC 311
>gi|113970620|ref|YP_734413.1| AMP-binding domain protein [Shewanella sp. MR-4]
gi|113885304|gb|ABI39356.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-4]
Length = 570
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 46 KADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
+A ALP + +RMG D++ P+ EQI++SL+ D INIQFT
Sbjct: 162 QAKALPE--LQFVIRMGAEQSPGMLNFDDLLLEVTPDDKAALEQIAESLSPYDAINIQFT 219
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A L+H+N++NN + + ++F D K+ + VP++H FG +G L + G
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCED-KLCIPVPLYHCFGMVLGNLVCLAKG 278
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
+ V P SF P+ +L + +E+C
Sbjct: 279 AAAVFPGDSFDPLTTLEVVERERC 302
>gi|355753990|gb|EHH57955.1| hypothetical protein EGM_07709, partial [Macaca fascicularis]
Length = 639
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGI 94
N +P A K+ LP T +++ GT L +++ + H + Q I + L+C D I
Sbjct: 223 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPI 282
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 283 NIQFTSGTTGSPKGATLSHYNIVNNSSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 342
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 343 TMMCLMYGATLILASPVFNGKKALEAISRER 373
>gi|392539101|ref|ZP_10286238.1| AMP-binding domain protein [Pseudoalteromonas marina mano4]
Length = 577
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 47 ADALPT--KLTRLA--LRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGT 102
A ALP + R+ + G F SDIM+ A P + I+ +LN INIQFTSGT
Sbjct: 170 AKALPNLKNVIRIGDNVSAGMFSFSDIMRMATPAHELELNAIAANLNADQDINIQFTSGT 229
Query: 103 TGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162
TG+PK A LTH N++NN+ F+G + F + D K+ + VP++H FG +G L + G+
Sbjct: 230 TGNPKGATLTHKNILNNALFVGDSMHFTEHD-KLCIPVPLYHCFGMVLGSLLCVTKGAAA 288
Query: 163 VVPAPSFKPMDSLRAIAKEKC 183
+ P+ SF +L I +E C
Sbjct: 289 IYPSDSFDAKTTLDVIEQEGC 309
>gi|254460745|ref|ZP_05074161.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2083]
gi|206677334|gb|EDZ41821.1| acyl-CoA synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 587
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +++ GP R +I ++L + INIQFTSGTTG PK A L+HYN++NN+
Sbjct: 200 GVWTFAEVSTLGGPAQQLRLPEIDRTLQPDEAINIQFTSGTTGQPKGATLSHYNIVNNAR 259
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ R++ + D ++ + VP++H FG MG+L ++ GS + P +F +L A+A E
Sbjct: 260 FVTDRIKLTEND-RLAIPVPLYHCFGMVMGVLGGVSKGSALIFPGEAFDAKQTLDALATE 318
Query: 182 KC 183
+C
Sbjct: 319 RC 320
>gi|402899613|ref|XP_003912785.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Papio anubis]
Length = 642
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGI 94
N +P A K+ LP T +++ GT L +++ + H + Q I + L+C D I
Sbjct: 226 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPI 285
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 286 NIQFTSGTTGSPKGATLSHYNIVNNSSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 345
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 346 TMMCLMYGATLILASPVFNGKKALEAISRER 376
>gi|148683984|gb|EDL15931.1| cDNA sequence BC018371, isoform CRA_a [Mus musculus]
Length = 627
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L DI+ G E + + + ++ L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAAGGKEQNLAQLRYNQRFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNS IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG+T ++ +PSF +L AI++EK
Sbjct: 321 VSMMHGATLLLSSPSFNGKKALEAISREK 349
>gi|241597991|ref|XP_002404834.1| acyl-CoA synthetase, putative [Ixodes scapularis]
gi|215502394|gb|EEC11888.1| acyl-CoA synthetase, putative [Ixodes scapularis]
Length = 204
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%)
Query: 70 MQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF 129
M+ A H + IS L +N+QFTSGTTG PKAA L+H+N++NN+N I +
Sbjct: 1 MKSATSADHAAMQSISSKLQFDAAVNVQFTSGTTGRPKAALLSHFNMVNNANSIARMFGL 60
Query: 130 DKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D I L VP+ H +G G L+A G+T V+PAPSFK +L AI +++C
Sbjct: 61 HEEDDTICLNVPLIHCYGCVGGSLSAAMFGATLVMPAPSFKAKAALEAIVEQRC 114
>gi|433635586|ref|YP_007269213.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
gi|432167179|emb|CCK64690.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
Length = 547
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + +LN D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAATLNGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|147919060|ref|YP_687210.1| putative long chain fatty-acid CoA ligase [Methanocella arvoryzae
MRE50]
gi|110622606|emb|CAJ37884.1| putative long chain fatty-acid CoA ligase [Methanocella arvoryzae
MRE50]
Length = 569
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L+ D INIQ+TSGTTG PK LTH+NL+NN FIG+ ++F + D K+ + VP +
Sbjct: 197 VQGTLSFDDPINIQYTSGTTGFPKGVVLTHHNLLNNGYFIGEYMKFTEKD-KLCIPVPFY 255
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + L M HG+T V+PA F P+ +L AI KEKC
Sbjct: 256 HCFGMVLSNLACMTHGATMVLPAEHFDPIATLTAIEKEKC 295
>gi|75075869|sp|Q4R4Z9.1|ACSF2_MACFA RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|67970968|dbj|BAE01826.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGI 94
N +P A K+ LP T +++ GT L +++ + H + Q I + L+C D I
Sbjct: 202 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPI 261
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 262 NIQFTSGTTGSPKGATLSHYNIVNNSSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 321
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 322 TMMCLMYGATLILASPVFNGKKALEAISRER 352
>gi|109114316|ref|XP_001097818.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Macaca mulatta]
Length = 618
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQ-ISKSLNCRDGI 94
N +P A K+ LP T +++ GT L +++ + H + Q I + L+C D I
Sbjct: 202 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLSCHDPI 261
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 262 NIQFTSGTTGSPKGATLSHYNIVNNSSILGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 321
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 322 TMMCLMYGATLILASPVFNGKKALEAISRER 352
>gi|24418933|ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus]
gi|81901906|sp|Q8VCW8.1|ACSF2_MOUSE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|17390865|gb|AAH18371.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|26329787|dbj|BAC28632.1| unnamed protein product [Mus musculus]
gi|38649240|gb|AAH63269.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|148683985|gb|EDL15932.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
gi|148683986|gb|EDL15933.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
Length = 615
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L DI+ G E + + + ++ L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAAGGKEQNLAQLRYNQRFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNS IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG+T ++ +PSF +L AI++EK
Sbjct: 321 VSMMHGATLLLSSPSFNGKKALEAISREK 349
>gi|403722609|ref|ZP_10945108.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206504|dbj|GAB89439.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 543
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I SL D INIQ+TSGTTG PK A LTH N+ NN +G+ + + D +I L
Sbjct: 171 RVAEIGASLTPDDPINIQYTSGTTGFPKGATLTHRNIANNGYLVGELINYTDAD-RICLP 229
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAP+F P +LRA+++ +C
Sbjct: 230 VPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPAATLRAVSEYRC 273
>gi|74199661|dbj|BAE41499.1| unnamed protein product [Mus musculus]
Length = 361
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L DI+ G E + + + ++ L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAAGGKEQNLAQLRYNQRFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKT--DHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNS IG+RL+ KT + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG+T ++ +PSF +L AI++EK
Sbjct: 321 VSMMHGATLLLSSPSFNGKKALEAISREK 349
>gi|385680892|ref|ZP_10054820.1| AMP-binding domain protein [Amycolatopsis sp. ATCC 39116]
Length = 533
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 24 RTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQ 83
RT D E PR +A + L +G+ S++M+ R +
Sbjct: 123 RTFKTSDYAAMIEEVRPRCAALEQVVL----------LGSDEWSELMESG-----RGKAL 167
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +
Sbjct: 168 PEVGLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCHYTEAD-RVCIPVPFY 226
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L A HG+ V+PAPSF+P +L+A+ E+C
Sbjct: 227 HCFGMVMGNLAATTHGACMVIPAPSFEPKATLQAVEAERC 266
>gi|443673957|ref|ZP_21139000.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443413383|emb|CCQ17339.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 538
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 95/207 (45%), Gaps = 37/207 (17%)
Query: 13 DRIGESQP-FRERTLSHQDKIRPGRESNPRPSAYKADALPTKL----TRLALRMGTFRLS 67
DR+G P E L+ + G AY+A L L + L G F+ S
Sbjct: 69 DRVGMWAPNCPEWVLAQYATAKIGAVLVNINPAYRAHELQFVLKQAGVSVLLSAGEFKGS 128
Query: 68 D---IMQGAGPEYHRRRE----------------------------QISKSLNCRDGINI 96
D I+ G PE RE +S+ L D INI
Sbjct: 129 DYAAIIAGVRPEVPTLREVLFIGTIQWEAMTDRGHRALAKTPKMITDVSEQLRADDAINI 188
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
Q+TSGTTG PK A L+H N++NN F+G+ + D ++ + VP +H FG MG L
Sbjct: 189 QYTSGTTGFPKGATLSHRNILNNGFFVGELCHYTAED-RVCIPVPFYHCFGMVMGNLACT 247
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+ V+P PSF P+ +L A+A EKC
Sbjct: 248 SHGAAMVIPGPSFDPVATLTAVASEKC 274
>gi|327349573|gb|EGE78430.1| long-chain-fatty-acid-CoA ligase [Ajellomyces dermatitidis ATCC
18188]
Length = 662
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR++ +S C N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D +
Sbjct: 211 QRRQDTLSPFDVC----NLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTQYD-ILC 265
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HGS V PA +F P LRAI++E+C
Sbjct: 266 CPPPLFHCFGLVLGLLACITHGSKVVYPAETFDPEAVLRAISEERC 311
>gi|391346942|ref|XP_003747724.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Metaseiulus occidentalis]
Length = 571
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 60 RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN 119
+ G R +D++ A +Q++ SL+ +N+QFTSGTTG PKA LTH+N++NN
Sbjct: 182 KSGCIRYTDVLASATAALENLADQVNSSLDMDSIVNVQFTSGTTGKPKAVPLTHHNIVNN 241
Query: 120 SNFIGKRLEFDKTDH-KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
++ +G + H I L VP+ H FG +G LN++ HG+ V+PAP F +L AI
Sbjct: 242 ASTLGHWSGIAEDSHAAICLNVPLIHCFGCVIGSLNSVIHGAKIVLPAPRFNAKAALSAI 301
Query: 179 AKEKC 183
+K KC
Sbjct: 302 SKHKC 306
>gi|345010053|ref|YP_004812407.1| AMP-dependent synthetase/ligase [Streptomyces violaceusniger Tu
4113]
gi|344036402|gb|AEM82127.1| AMP-dependent synthetase and ligase [Streptomyces violaceusniger Tu
4113]
Length = 574
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK 131
G PE RE + ++C D +NIQ+TSGTTG PK A L+H+N++NN F+G+ + +
Sbjct: 176 GVAPERLAEREAL---ISCDDAVNIQYTSGTTGFPKGATLSHHNILNNGFFVGETVRYTA 232
Query: 132 TDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D +I + VP +H FG MG L A +HG+ V+PA +F P+ +L A+ +E+C
Sbjct: 233 ED-RICVPVPFYHCFGMVMGNLAATSHGACVVIPAGTFDPVATLAAVERERC 283
>gi|239831428|ref|ZP_04679757.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
gi|239823695|gb|EEQ95263.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
Length = 571
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 41 RPSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
RP + LP+ R +R+GT D+ Q + Q++ L D I
Sbjct: 156 RPGHLMSGRLPS--LRCVIRLGTEQTPGMLNFDDVAQSGDEVTRQELAQLADELQFDDPI 213
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A L+H+N++NN F+G+ ++ + D ++ + VP +H FG +G L
Sbjct: 214 NIQFTSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQD-RLCIPVPFYHCFGMVLGNLA 272
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGS V+P SF P +L+ + +E+C
Sbjct: 273 CVTHGSCMVIPNDSFDPFLTLQTVEEEQC 301
>gi|239608371|gb|EEQ85358.1| long-chain-fatty-acid-CoA ligase [Ajellomyces dermatitidis ER-3]
Length = 592
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR++ +S C N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D +
Sbjct: 211 QRRQDTLSPFDVC----NLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTQYD-ILC 265
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HGS V PA +F P LRAI++E+C
Sbjct: 266 CPPPLFHCFGLVLGLLACITHGSKVVYPAETFDPEAVLRAISEERC 311
>gi|261203189|ref|XP_002628808.1| long-chain-fatty-acid-CoA ligase [Ajellomyces dermatitidis
SLH14081]
gi|239586593|gb|EEQ69236.1| long-chain-fatty-acid-CoA ligase [Ajellomyces dermatitidis
SLH14081]
Length = 592
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR++ +S C N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D +
Sbjct: 211 QRRQDTLSPFDVC----NLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTQYD-ILC 265
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HGS V PA +F P LRAI++E+C
Sbjct: 266 CPPPLFHCFGLVLGLLACITHGSKVVYPAETFDPEAVLRAISEERC 311
>gi|379710061|ref|YP_005265266.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374847560|emb|CCF64630.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 541
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I + VP +H
Sbjct: 176 AAELSMDDAINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEED-RICVPVPFYH 234
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAPSF+P +L A+ E+C
Sbjct: 235 CFGMVMGNLAATSHGAAIVIPAPSFQPAATLAAVEAERC 273
>gi|327399671|ref|YP_004340540.1| long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
gi|327182300|gb|AEA34481.1| Long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
Length = 564
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F+ D++ A KSL+ D INIQ+TSGTTG PKAA L+H+N+INN
Sbjct: 170 GMFKWKDVLSMASRVDDSELRDRQKSLDFDDAINIQYTSGTTGFPKAATLSHFNIINNGF 229
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++F D ++ + VP +H FG M L HG+T V+P+ F +L A+ KE
Sbjct: 230 FVGQAMKFTDKD-RLCVPVPFYHCFGMVMSNLTCTTHGATIVLPSEYFNAEATLEAVEKE 288
Query: 182 KC 183
KC
Sbjct: 289 KC 290
>gi|77993368|ref|NP_001030123.1| acyl-CoA synthetase family member 2, mitochondrial precursor
[Rattus norvegicus]
gi|123781622|sp|Q499N5.1|ACSF2_RAT RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|71121982|gb|AAH99826.1| Acyl-CoA synthetase family member 2 [Rattus norvegicus]
Length = 615
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L +++ G E + + + + L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDEVVAAGGKEQNLAQLRYHQGFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNSN IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSNLIGQRLKMPAKTAEELRMVLPCPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG+T ++ +PSF +L AI++EK
Sbjct: 321 VSVVHGATLLLSSPSFNGKKALEAISREK 349
>gi|404213877|ref|YP_006668071.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403644676|gb|AFR47916.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 547
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + G+ + A E R +++ SL+ D INIQ+TSGTTG PK A L+H N
Sbjct: 152 REVVLFGSDEWDALCVEASAEELERVSEVAASLSPDDPINIQYTSGTTGFPKGATLSHRN 211
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
+ NN +G+ L + D +I L VP +H FG MG L A +HG+ V+PAP+F P +L
Sbjct: 212 IGNNGYLVGELLNY-TADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPRATL 270
Query: 176 RAIAKEKC 183
A+A+ +C
Sbjct: 271 EAVAEYRC 278
>gi|153010019|ref|YP_001371234.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
gi|151561907|gb|ABS15405.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
Length = 562
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 41 RPSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
RP ++ LP R +R+G D+ Q + Q+++ L D I
Sbjct: 147 RPGHVMSERLPN--LRCVIRIGAEQTPGMLNFDDVAQSGDEVTGQELAQLAEELQFDDPI 204
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A L+H+N++NN F+G+ ++ + D ++ + VP +H FG +G L
Sbjct: 205 NIQFTSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQD-RLCIPVPFYHCFGMVLGNLA 263
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGS V+P SF P+ +L+ + +E+C
Sbjct: 264 CVTHGSCMVIPNESFDPLLTLQTVEEEQC 292
>gi|120612991|ref|YP_972669.1| AMP-binding domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591455|gb|ABM34895.1| AMP-dependent synthetase and ligase [Acidovorax citrulli AAC00-1]
Length = 577
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S+++ G R + ++K+L+ RD INIQFTSGTTG PK A LTH N++NN
Sbjct: 187 GMLRFSELL-ARGDAQDARIDAVAKTLDPRDPINIQFTSGTTGFPKGATLTHRNILNNGF 245
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L + HGST V P+ F P+ L + E
Sbjct: 246 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACVTHGSTIVYPSDGFDPLSVLETVQAE 304
Query: 182 KC 183
+C
Sbjct: 305 RC 306
>gi|194289655|ref|YP_002005562.1| amp-binding domain protein [Cupriavidus taiwanensis LMG 19424]
gi|193223490|emb|CAQ69495.1| putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
[Cupriavidus taiwanensis LMG 19424]
Length = 574
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A +A LP+ R +RMG R +D++ ++I+ L+ D IN
Sbjct: 161 PGALQAARLPS--LRCVIRMGEGETPGMMRYADVLARGAGVARAELDRITAQLDRHDAIN 218
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
+QFTSGTTG PK A LTH N++NN+ FI + F + D K+ + VP +H FG + +L
Sbjct: 219 VQFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQD-KLCIPVPFYHCFGMVLSVLAC 277
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P ++RA+++E+C
Sbjct: 278 VSTGAAMVFPGEAFDPEATMRAVSEERC 305
>gi|348522504|ref|XP_003448764.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 576
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 20 PFRERTLSHQDKIR---PGRESNPRPSAYKADALPTKLTRLAL---RMGTFRLSDIMQGA 73
P + +TL++ + +R P E+ P K+ LP + + L + G D+MQ
Sbjct: 142 PTQFKTLNYCNMLRKICPEIETC-SPGDIKSSRLPDLRSVIVLDSRQPGMLHFDDVMQAG 200
Query: 74 GPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTD 133
G ++ ++ + + K ++ D INIQFTSGTTG PK A L+H+N+INNS FIG+RL +
Sbjct: 201 GSQHMQQLQDLQKKISFDDPINIQFTSGTTGAPKGATLSHHNIINNSYFIGRRLGYHWRP 260
Query: 134 H-KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H ++ + VP++H FG+ G + HG + V P+ + +L AI E+C
Sbjct: 261 HTRVCVPVPLYHCFGSVGGGICMAVHGISIVFPSRGYDGKANLAAIESERC 311
>gi|363422556|ref|ZP_09310631.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
gi|359732854|gb|EHK81861.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
Length = 555
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP++H F
Sbjct: 187 SLSPDDPINIQYTSGTTGFPKGATLSHHNVLNNGFFVGELCHYTERD-RVCIPVPLYHCF 245
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+PAP F P +L A+A+EKC
Sbjct: 246 GMTMGNLACTSHGATIVLPAPGFDPAATLGAVAEEKC 282
>gi|332848510|ref|XP_003315662.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 602
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 179 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 237
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 238 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 297
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 298 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 336
>gi|404259900|ref|ZP_10963203.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401568|dbj|GAC01613.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 551
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+ L++ D +I L
Sbjct: 177 RVAEIAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDY-TADDRICLP 235
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+P P+F P +L A+A+ +C
Sbjct: 236 VPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEHRC 279
>gi|343962485|dbj|BAK62830.1| hypothetical protein [Pan troglodytes]
Length = 615
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 192 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 250
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 251 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 310
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 311 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 349
>gi|343927183|ref|ZP_08766662.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343762921|dbj|GAA13588.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 551
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+ L++ D +I L
Sbjct: 177 RVAEIAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDY-TADDRICLP 235
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+P P+F P +L A+A+ +C
Sbjct: 236 VPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEHRC 279
>gi|114669318|ref|XP_001169992.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan troglodytes]
gi|410209622|gb|JAA02030.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410249930|gb|JAA12932.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410297578|gb|JAA27389.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410331767|gb|JAA34830.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
Length = 615
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 192 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 250
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 251 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 310
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 311 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 349
>gi|195388515|ref|XP_002052925.1| GJ17825 [Drosophila virilis]
gi|194149382|gb|EDW65080.1| GJ17825 [Drosophila virilis]
Length = 598
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R +++ + ++ + + N+QFTSGTTGHPKAA L+H++ +NN
Sbjct: 202 GALRFDELLDLSNASEQAEIGKLQREIQPESPCNVQFTSGTTGHPKAAVLSHHSFVNNGI 261
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G R E + +I +QVP+FH FG + I+ AM G+T V+PA F P DSL+AI E
Sbjct: 262 HVGNRNELE--GERICVQVPLFHAFGVGITIMAAMAKGATLVLPAAGFNPKDSLQAIVNE 319
Query: 182 KC 183
KC
Sbjct: 320 KC 321
>gi|397493194|ref|XP_003817497.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan paniscus]
Length = 602
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 179 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 237
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 238 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 297
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 298 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 336
>gi|397493192|ref|XP_003817496.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Pan paniscus]
Length = 615
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 192 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 250
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 251 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 310
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 311 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 349
>gi|444517741|gb|ELV11759.1| Acyl-CoA synthetase family member 2, mitochondrial [Tupaia
chinensis]
Length = 620
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + + ++ L+C D INI
Sbjct: 206 QPGALKSQRLPDLTTVISVDDPLPGTLLLDEVVAAGSTEQQLAQLRYTQQFLSCHDPINI 265
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNSN IG+RL K + +++L P++H G+ G +
Sbjct: 266 QFTSGTTGSPKGATLSHYNIVNNSNMIGERLRLGKKKPEESRVILPSPLYHCLGSVGGTM 325
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ HG+T ++ +P F +L A++KE+
Sbjct: 326 VCVMHGATLILSSPIFDGKKALEAVSKER 354
>gi|332848513|ref|XP_003315663.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 640
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 217 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 275
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 276 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 335
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 336 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 374
>gi|114669320|ref|XP_511878.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan troglodytes]
Length = 572
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 149 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 207
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 208 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 267
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 268 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 306
>gi|427430670|ref|ZP_18920432.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
gi|425878639|gb|EKV27353.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
Length = 566
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALR----MGTFRLSDIMQGAGPEYHRRREQISK 86
K+ P + P P A KA+ LP + + G + ++ + A + R ++++
Sbjct: 146 KLAPELDHCP-PGALKAERLPDLKAVVHIGNDHIHGMYAFKELYEMAEDSHRARVAELAE 204
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
L D INIQFTSGTTG PK A LTH+N++NN F+ + + D ++ + VP++H F
Sbjct: 205 KLQFDDPINIQFTSGTTGFPKGATLTHHNILNNGFFVAEAIRLGHGD-RLCIPVPLYHCF 263
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L + HG+T V P +F P+ L + +EKC
Sbjct: 264 GMVMGNLGCVTHGATMVYPGEAFDPLAVLETVEREKC 300
>gi|452955885|gb|EME61280.1| AMP-binding domain protein, partial [Rhodococcus ruber BKS 20-38]
Length = 293
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + + L+ D INIQ+TSGTTG PK A L+H+N+++N F+G+ + + D K+ +
Sbjct: 180 RLDAAQRDLSADDPINIQYTSGTTGFPKGATLSHHNILSNGYFVGELCHYTEQD-KVCIP 238
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +HG+T V+P P+F P +L A+A+E+C
Sbjct: 239 VPFYHCFGMVMGNLACTSHGATMVIPGPAFDPTQTLAAVAEERC 282
>gi|397493198|ref|XP_003817499.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Pan paniscus]
Length = 640
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 217 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 275
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 276 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 335
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 336 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 374
>gi|409359014|ref|ZP_11237371.1| fatty-acyl-CoA synthase [Dietzia alimentaria 72]
Length = 549
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 73 AGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT 132
+GP I L D INIQ+TSGTTG PK A L+H N++NN F+G+ + + +
Sbjct: 173 SGPTDVEVLATIRAGLQPDDPINIQYTSGTTGFPKGATLSHTNILNNGFFVGETIHYTEN 232
Query: 133 DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D ++ + VP +H FG MG L +HGS V+PAP+F P SLRA+ +E C
Sbjct: 233 D-RVCIPVPFYHCFGMVMGNLACTSHGSAMVIPAPAFDPEASLRAVEQETC 282
>gi|15559516|gb|AAH14123.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
Length = 615
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 199 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 258
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 259 NIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAG 318
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 319 TMMCLMYGATLILASPIFNGKKALEAISRER 349
>gi|374571689|ref|ZP_09644785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374420010|gb|EHQ99542.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 564
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRR-EQISKSLNC 90
++ +P +A LP R+ +++G T ++ G G HR + + SL
Sbjct: 146 ASAKPGQLRAARLPA--LRIVIQIGGPACPGTIPFEEV-AGMGGTLHREQLAPLGASLQF 202
Query: 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150
D +NIQFTSGTTG PK LTH+N++NN F+G+ + + D +I + VP++H FG M
Sbjct: 203 DDAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMRLTEQD-RICIPVPLYHCFGMVM 261
Query: 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G L ++ G+T V P F P+ +LR I +EKC
Sbjct: 262 GNLASVTLGATMVYPGEGFDPLATLRTIEQEKC 294
>gi|221213085|ref|ZP_03586061.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221167298|gb|EED99768.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 564
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G S++M P+ R +SL D INIQFTSGTTG PK A L+H N++NN
Sbjct: 174 GVMCFSELMALGDPDDPAVRAA-GESLKATDPINIQFTSGTTGFPKGATLSHRNILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + F + D ++ + VP++H FG MG LN + HG+T V P SF P+ L A+ E
Sbjct: 233 FVGEAMRFTERD-RLCVPVPLYHCFGMVMGNLNCLAHGATIVYPGESFDPVSVLTAVQDE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|114047851|ref|YP_738401.1| AMP-binding domain protein [Shewanella sp. MR-7]
gi|113889293|gb|ABI43344.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-7]
Length = 570
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 46 KADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
+A ALP +RMGT D++ P+ ++I++SL+ D INIQFT
Sbjct: 162 QAKALPE--LEFVIRMGTEKSLGMLNFDDLLLEVTPDDKAALDRIAESLSPYDAINIQFT 219
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A L+H+N++NN + + ++F D K+ + VP++H FG +G L + G
Sbjct: 220 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCND-KLCIPVPLYHCFGMVLGNLVCLAKG 278
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
+ V P SF P+ +L I +E+C
Sbjct: 279 AAAVFPGDSFDPLTTLEVIERERC 302
>gi|397493196|ref|XP_003817498.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan paniscus]
Length = 572
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 149 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 207
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 208 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 267
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 268 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 306
>gi|409393138|ref|ZP_11244621.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403197125|dbj|GAB87855.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 551
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+ L++ D +I L
Sbjct: 177 RVAEIAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDY-TADDRICLP 235
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+P P+F P +L A+A+ +C
Sbjct: 236 VPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPKATLDAVAEYRC 279
>gi|194379790|dbj|BAG58247.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 186 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 245
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 246 NIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAG 305
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 306 TMMCLMYGATLILASPIFNGKKALEAISRER 336
>gi|194390324|dbj|BAG61931.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 156 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 215
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 216 NIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAG 275
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 276 TMMCLMYGATLILASPIFNGKKALEAISRER 306
>gi|404320688|ref|ZP_10968621.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi CTS-325]
Length = 562
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 41 RPSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
RP ++ LP R +R+G ++ Q + Q+S+ L D I
Sbjct: 147 RPGHVMSERLPN--LRCVIRLGAEQTPGMLNFDEVTQSGDEVTGQELAQLSEELQFDDPI 204
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A L+H+N++NN F+G+ ++ + D ++ + VP +H FG +G L
Sbjct: 205 NIQFTSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQD-RLCIPVPFYHCFGMVLGNLA 263
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGS V+P SF P+ +L+ + +E+C
Sbjct: 264 CVTHGSCMVIPNDSFDPLLTLQTVEEEQC 292
>gi|156151445|ref|NP_079425.3| acyl-CoA synthetase family member 2, mitochondrial precursor [Homo
sapiens]
gi|166198367|sp|Q96CM8.2|ACSF2_HUMAN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|10436885|dbj|BAB14930.1| unnamed protein product [Homo sapiens]
gi|15082296|gb|AAH12053.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
gi|37182442|gb|AAQ89023.1| AVYV493 [Homo sapiens]
gi|119615018|gb|EAW94612.1| hypothetical protein FLJ20920 [Homo sapiens]
Length = 615
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 199 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 258
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 259 NIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAG 318
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 319 TMMCLMYGATLILASPIFNGKKALEAISRER 349
>gi|395005400|ref|ZP_10389282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394316643|gb|EJE53356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 564
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 27/171 (15%)
Query: 24 RTLSHQ-DKIRPGRESNPRPSAYK------ADALPTKLTRLALRMGTFRLSDIMQGAGPE 76
R ++H+ PGR + R + K +D +P G R SD++ P
Sbjct: 139 RCIAHEVSHAVPGRLESARLPSLKTVVQIGSDTVP----------GFMRFSDLLAMGDPA 188
Query: 77 YHRRREQISKSLNCR----DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT 132
+Q SL R D INIQFTSGTTG PK A LTH N++NN FIG+ +
Sbjct: 189 -----DQAVHSLGARLRNTDAINIQFTSGTTGSPKGATLTHRNVLNNGFFIGEAMRLSP- 242
Query: 133 DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D ++ + VP++H FG +G L A+ HG+T V P +F+P+ LRA+ E+C
Sbjct: 243 DDRLCIPVPLYHCFGMVVGNLAALTHGATIVYPNDAFEPVSVLRAVQDERC 293
>gi|426347594|ref|XP_004041434.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gorilla gorilla gorilla]
Length = 652
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 229 QICPDVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 287
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 288 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 347
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 348 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 386
>gi|194376742|dbj|BAG57517.1| unnamed protein product [Homo sapiens]
Length = 640
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 224 NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 283
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 284 NIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAG 343
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 344 TMMCLMYGATLILASPIFNGKKALEAISRER 374
>gi|407647404|ref|YP_006811163.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
gi|407310288|gb|AFU04189.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
Length = 541
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I +
Sbjct: 169 RLATLAAELSIDDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEQD-RICVP 227
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +H +T V+PAP+F P+ +L A+ E+C
Sbjct: 228 VPFYHCFGMVMGNLAATSHAATVVIPAPAFDPVATLAAVEAERC 271
>gi|262201331|ref|YP_003272539.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
gi|262084678|gb|ACY20646.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
Length = 542
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
++ +L+ D INIQ+TSGTTG PK A LTH N+ NN +G+ L + D +I + VP +
Sbjct: 175 VAATLSPDDAINIQYTSGTTGFPKGATLTHRNIGNNGYLVGELLNYTDAD-RICIPVPFY 233
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L A +HG+ V+PAP+F P +LRA+A+ +C
Sbjct: 234 HCFGMVMGNLAATSHGAAMVIPAPAFDPEATLRAVAEYRC 273
>gi|389862540|ref|YP_006364780.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
gi|388484743|emb|CCH86283.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
Length = 551
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L+ D INIQ+TSGTTG PK A LTH+NL+NN F+G+ + + D ++ + VP +H
Sbjct: 179 AAQLSPDDPINIQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEAD-RVCIPVPYYH 237
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L +HG+T V+PAP F P +L+A+ E+C
Sbjct: 238 CFGMGMGNLGCTSHGATMVIPAPGFDPAATLQAVQDERC 276
>gi|326202013|ref|ZP_08191883.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
gi|325987808|gb|EGD48634.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
Length = 554
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F DI++ IS SL+C D IN+Q+TSGTTG PK LTHYN+INN
Sbjct: 161 GMFNWDDIIEFGRDISDEELYNISNSLDCHDVINMQYTSGTTGFPKGVMLTHYNIINNGM 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG + F D K+ + VP FH FG + I+ + HG TT+VP + P+ + AI E
Sbjct: 221 CIGDCMHFTYAD-KLCIPVPFFHCFGLVLAIMACVTHG-TTMVPIDYYSPIKVMNAIQSE 278
Query: 182 KC 183
C
Sbjct: 279 GC 280
>gi|359765441|ref|ZP_09269267.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317165|dbj|GAB22100.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 561
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L D INIQ+TSGTTG PK A L+H N+ NN +G+ L++ D +I + VP +H
Sbjct: 188 AAGLTADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDY-SADDRICIPVPFYH 246
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+T V+P+P+F P +LRA+A KC
Sbjct: 247 CFGMVMGNLAATSHGATMVIPSPTFDPEAALRAVADHKC 285
>gi|419954341|ref|ZP_14470480.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
gi|387968892|gb|EIK53178.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
Length = 560
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P+ +L+A+A+E+
Sbjct: 236 SLGLSEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEPLAALQAVAEER 291
>gi|378716736|ref|YP_005281625.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751439|gb|AFA72259.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 561
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L D INIQ+TSGTTG PK A L+H N+ NN +G+ L++ D +I + VP +H
Sbjct: 188 AAGLTADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLDY-SADDRICIPVPFYH 246
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+T V+P+P+F P +LRA+A KC
Sbjct: 247 CFGMVMGNLAATSHGATMVIPSPTFDPEAALRAVADHKC 285
>gi|118151292|ref|NP_001071580.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Bos
taurus]
gi|122142559|sp|Q17QJ1.1|ACSF2_BOVIN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|109658304|gb|AAI18332.1| Hypothetical protein LOC768237 [Bos taurus]
gi|296476507|tpg|DAA18622.1| TPA: acyl-CoA synthetase family member 2, mitochondrial precursor
[Bos taurus]
Length = 615
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 201 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLTRLRHTQQFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK-CMEYLT 188
++ HG T ++ +P F+ +L AI++E+ C Y T
Sbjct: 321 VSLMHGVTLILCSPVFEGKKTLEAISRERGCFLYGT 356
>gi|304309908|ref|YP_003809506.1| AMP-binding protein [gamma proteobacterium HdN1]
gi|301795641|emb|CBL43840.1| AMP-binding family protein [gamma proteobacterium HdN1]
Length = 574
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F ++ AG ++ I+ L D INIQFTSGTTG+PK A LTH+N++NN
Sbjct: 180 GMFNFDEVCASAGEREYQLLADIAALLQPDDAINIQFTSGTTGNPKGATLTHHNILNNGY 239
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + + F + D ++ + VP++H FG MG L + HG+ + PA +F P+ L + E
Sbjct: 240 QVAQGMNFTEQD-RLCIPVPLYHCFGMVMGNLACLTHGAAAIFPAEAFDPISVLETVQAE 298
Query: 182 KC 183
KC
Sbjct: 299 KC 300
>gi|242010698|ref|XP_002426097.1| firefly luciferase, putative [Pediculus humanus corporis]
gi|212510130|gb|EEB13359.1| firefly luciferase, putative [Pediculus humanus corporis]
Length = 582
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/118 (39%), Positives = 71/118 (60%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
+DI++ +ISKSL + +NIQFTSGTTG PK A L+H+N++NNS I +
Sbjct: 198 FNDIVKKCTGNAKDELRKISKSLGPEEPVNIQFTSGTTGSPKGAVLSHFNIVNNSYCISR 257
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R EF + H + P+FH G+ + +L ++ G T V+P +F P ++ AI +EKC
Sbjct: 258 RQEFHEKHHIVCFMGPLFHALGSVVAMLGCVHEGLTLVIPTTAFSPTKAVEAIVQEKC 315
>gi|240273500|gb|EER37020.1| long chain fatty acid CoA ligase [Ajellomyces capsulatus H143]
Length = 589
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
GT++ + P +R Q +L+ D N+QFTSG+TG+PKA+ LTH+NLINNS
Sbjct: 192 FGTYKDVILAGNVVPLSAVQRRQ--DTLSPFDVCNLQFTSGSTGNPKASMLTHHNLINNS 249
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R++F + D + P+FH FG +G+L + HG+ V PA +F P LRAI+
Sbjct: 250 RFIGDRMDFTEYD-ILCCPPPLFHCFGLVLGLLACITHGAKVVYPAETFDPEAVLRAISD 308
Query: 181 EKCMEY 186
E+C +
Sbjct: 309 ERCTAF 314
>gi|405976077|gb|EKC40598.1| Acyl-CoA synthetase family member 2, mitochondrial [Crassostrea
gigas]
Length = 606
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
MGT +DIM+ + + + L + INIQFTSGTTG+PK L+H+N++NNS
Sbjct: 214 MGTINFNDIMKAGTTKDRTEIQNLQNRLQFDEPINIQFTSGTTGNPKGVTLSHHNIVNNS 273
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
F+ +RL + + I + VP++H FG +G L + G+T V P+ +F +L+A A+
Sbjct: 274 YFVAQRLNYHTNETTICIPVPLYHCFGMVLGSLCTVTAGATCVYPSSTFDAGKTLKAAAQ 333
Query: 181 EKC 183
E+C
Sbjct: 334 ERC 336
>gi|339501874|ref|YP_004689294.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338755867|gb|AEI92331.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
Length = 565
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++IS L+ +D INIQFTSGTTG PK A LTH+N++NN++F+ + ++F + D ++ + VP
Sbjct: 200 DRISNDLSPQDAINIQFTSGTTGSPKGACLTHHNIVNNAHFVTQTMQFTEED-RLCIPVP 258
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L ++ G+T V+P F +L A+ +EKC
Sbjct: 259 FYHCFGMVMGTLGCVSKGATMVIPGEGFDARATLEAVTQEKC 300
>gi|381167211|ref|ZP_09876419.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
gi|380683519|emb|CCG41231.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
Length = 564
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 41 RPSAYKADALPTKLTRLALRMGTFRLSDIMQ-----GAGPEYHRRRE-QISKSLNCRDGI 94
RP A ++ LP R+ +RMG + ++ G E HR R +I ++L D I
Sbjct: 149 RPGALRSVRLPE--LRVVIRMGEEKTPGMLNFAEIPGLADETHRTRLIEIGRTLQFDDPI 206
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A LTH+N++NN F+ + + + D ++ + VP +H FG MG L
Sbjct: 207 NIQFTSGTTGRPKGATLTHHNILNNGYFVAEGIRVTEVD-RMCIPVPFYHCFGMVMGNLG 265
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A+ HG+ V+P F L+ + +E+C
Sbjct: 266 AITHGACMVIPGEGFDAERVLQTVQQERC 294
>gi|359771954|ref|ZP_09275394.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310909|dbj|GAB18172.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 547
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ SL+ D INIQ+TSGTTG PK A LTH N++NN F+G+ + + D ++ L VP +H
Sbjct: 183 AASLHPDDPINIQYTSGTTGAPKGATLTHRNILNNGYFVGELINYTDAD-RVCLPVPFYH 241
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+PAP+F P +L A+ K +C
Sbjct: 242 CFGMVMGNLAATSHGAAMVIPAPAFDPAATLSAVEKYQC 280
>gi|213964984|ref|ZP_03393183.1| acyl-CoA synthetase family member 2 [Corynebacterium amycolatum
SK46]
gi|213952520|gb|EEB63903.1| acyl-CoA synthetase family member 2 [Corynebacterium amycolatum
SK46]
Length = 584
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+ + L D INIQFTSGTTG PK A LTH NL+NN FIG+ L + +TD +I + VP
Sbjct: 213 EYTSQLKPDDPINIQFTSGTTGFPKGATLTHRNLLNNGYFIGELLGYTETD-RICVPVPF 271
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
FHTFG +G A HG+ V+PAPSFK ++L+A+ K
Sbjct: 272 FHTFGMVIGTFAAFTHGAAIVIPAPSFKARETLKAVHSAK 311
>gi|404424017|ref|ZP_11005628.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403652493|gb|EJZ07537.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 538
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A L+H N++NN F+G ++FD+ D ++ + VP +H FG
Sbjct: 175 LSNTDPINIQYTSGTTGFPKGATLSHRNILNNGFFVGGLIKFDRGD-RVCIPVPFYHCFG 233
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A+ HG+T V+PAP F P +L + E+C
Sbjct: 234 MVMGNLGALTHGATIVIPAPGFDPGITLATVESERC 269
>gi|326319034|ref|YP_004236706.1| long-chain-fatty-acid--CoA ligase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375870|gb|ADX48139.1| Long-chain-fatty-acid--CoA ligase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 577
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ G R ++++K+L +D INIQFTSGTTG PK A LTH N++NN
Sbjct: 187 GMLRFSQLL-ARGDAQDARIDEVAKTLGAQDPINIQFTSGTTGFPKGATLTHRNILNNGF 245
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L + HGST V P+ F P+ L + E
Sbjct: 246 FIGECMRLTPQD-RLCIPVPLYHCFGMVLGNLACVTHGSTIVYPSDGFDPLAVLETVQAE 304
Query: 182 KC 183
+C
Sbjct: 305 RC 306
>gi|291278972|ref|YP_003495807.1| acyl-CoA synthase [Deferribacter desulfuricans SSM1]
gi|290753674|dbj|BAI80051.1| acyl-CoA synthase [Deferribacter desulfuricans SSM1]
Length = 551
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD+++ +++ ++ SL+ D IN+Q+TSGTTG PK LTHYN++NN+
Sbjct: 159 GIMKFSDLVKMGDDIDYKKLNEVMNSLHFDDVINMQYTSGTTGFPKGVMLTHYNILNNAY 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG + F D ++ + VP FH FG + IL + HG+ T+VP +F P++ L+ + KE
Sbjct: 219 AIGHVMNFTDKD-RLCIPVPFFHCFGLVLSILVCLTHGA-TMVPVENFNPIEVLKTVEKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|375140128|ref|YP_005000777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820749|gb|AEV73562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 543
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R I+ +L D INIQ+TSGTTG PK A L+H+N++NN +G+ + + D +I +
Sbjct: 172 RLSAIAHTLTADDPINIQYTSGTTGFPKGATLSHHNILNNGFLVGELCGYTEAD-RICIP 230
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAPSF+ +L A+A E+C
Sbjct: 231 VPFYHCFGMVMGNLAATSHGACMVIPAPSFEARATLEAVAAERC 274
>gi|424851538|ref|ZP_18275935.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666203|gb|EHI46274.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 546
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 184 ALSSDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCF 242
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+P PSF P +L+A+ EKC
Sbjct: 243 GMVMGNLACTSHGATMVIPGPSFDPKATLQAVEAEKC 279
>gi|377568916|ref|ZP_09798091.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533823|dbj|GAB43256.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 547
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+ L + D +I L
Sbjct: 176 RVAEIAASLSPDDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLNY-TADDRICLP 234
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAP+F P +L A+A+ +C
Sbjct: 235 VPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPRATLDAVAEYRC 278
>gi|419961133|ref|ZP_14477142.1| AMP-binding domain protein [Rhodococcus opacus M213]
gi|414573454|gb|EKT84138.1| AMP-binding domain protein [Rhodococcus opacus M213]
Length = 545
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 183 ALSSDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+P PSF P +L+A+ EKC
Sbjct: 242 GMVMGNLACTSHGATMVIPGPSFDPKATLQAVEAEKC 278
>gi|432340260|ref|ZP_19589709.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
gi|430774710|gb|ELB90289.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
Length = 546
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 183 ALSSDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+P PSF P +L+A+ EKC
Sbjct: 242 GMVMGNLACTSHGATMVIPGPSFDPKATLQAVEAEKC 278
>gi|225554462|gb|EEH02760.1| long-chain-fatty-acid-CoA ligase [Ajellomyces capsulatus G186AR]
Length = 589
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
GT++ + P +R Q +L+ D N+QFTSG+TG+PKA+ LTH+NLINNS
Sbjct: 192 FGTYKDVILAGNVVPLSAVQRRQ--DTLSPFDVCNLQFTSGSTGNPKASMLTHHNLINNS 249
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R++F + D + P+FH FG +G+L + HG+ V PA +F P LRAI+
Sbjct: 250 RFIGDRMDFTEYD-ILCCPPPLFHCFGLVLGLLACITHGAKVVYPAETFDPKAVLRAISD 308
Query: 181 EKC 183
E+C
Sbjct: 309 ERC 311
>gi|432335273|ref|ZP_19586870.1| AMP-binding domain protein, partial [Rhodococcus wratislaviensis
IFP 2016]
gi|430777809|gb|ELB93135.1| AMP-binding domain protein, partial [Rhodococcus wratislaviensis
IFP 2016]
Length = 449
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 183 ALSSDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+P PSF P +L+A+ EKC
Sbjct: 242 GMVMGNLACTSHGATMVIPGPSFDPKATLQAVEAEKC 278
>gi|194374009|dbj|BAG62317.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P A K+ LP T +++ GT L +++ H + Q ++
Sbjct: 32 QICPEVE-NAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQ 90
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++
Sbjct: 91 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLY 150
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 151 HCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRER 189
>gi|229492698|ref|ZP_04386499.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|229320357|gb|EEN86177.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 542
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK L+H N++NN F+G+ L + + D ++ L VP +H F
Sbjct: 183 TLSPNDPINIQYTSGTTGFPKGVTLSHRNILNNGYFVGELLGYTEHD-RVCLPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L A HG+ V+P+P+F P+ +LRA A E+C
Sbjct: 242 GMVMGNLGATTHGACVVIPSPAFDPVATLRACADERC 278
>gi|331699394|ref|YP_004335633.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326954083|gb|AEA27780.1| Long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 554
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 11 KEDRIGESQP-FRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGT----FR 65
K DR+G P E TL + G AY+ L L + +RM F+
Sbjct: 75 KGDRVGIWAPNMAEWTLVQYATAKIGAILVNINPAYRTHELEYVLNQAGIRMLVSAEKFK 134
Query: 66 LSD-----------------IMQGAGPEYHR--------RREQISK---SLNCRDGINIQ 97
SD ++ GPE+ RE++++ +L+ D INIQ
Sbjct: 135 TSDYVGMIEKVRGSCPALEQVVIIGGPEWEALVESGRGGDREELARLQAALSPDDPINIQ 194
Query: 98 FTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
+TSGTTG PK A L+H+N++NN F+G+ + D ++ + VP +H FG MG L
Sbjct: 195 YTSGTTGFPKGATLSHHNILNNGYFVGRLCGYTAED-RVCIPVPFYHCFGMVMGNLGCTT 253
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
+GST V+PA F P +LRA+A+E+C
Sbjct: 254 NGSTMVIPAQGFDPEATLRAVAQERC 279
>gi|312103876|ref|XP_003150266.1| hypothetical protein LOAG_14723 [Loa loa]
gi|307754569|gb|EFO13803.1| hypothetical protein LOAG_14723 [Loa loa]
Length = 165
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ SD+++ E + I + + D +NIQ+TSGTTG PK A LTH+N++NN+
Sbjct: 43 GAWKYSDVIKMGTEEDRLKLADIERQIRPDDPVNIQYTSGTTGQPKGATLTHHNVVNNAY 102
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+R +++ I + P++H FG MG L+A H T V PAPSF + +++AI +E
Sbjct: 103 FVGRRAGYNEKRTIICIPNPLYHCFGCVMGSLSACVHLQTCVFPAPSFDALAAIQAIHEE 162
Query: 182 K 182
K
Sbjct: 163 K 163
>gi|307545011|ref|YP_003897490.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
gi|307217035|emb|CBV42305.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
Length = 560
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R S ++Q A R ++ L+ + INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 175 GMWRWSAMLQRADEVSVERLAEVQAGLDFDEPINIQYTSGTTGAPKGATLSHHNILNNGF 234
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + ++ D+TD ++++ VP++H FG MG L + HG+ + P F P+ +L A+++E
Sbjct: 235 FVARTMKLDETD-RMVIPVPLYHCFGMVMGNLGCVTHGTAMIYPGDGFDPLATLEAVSEE 293
Query: 182 K 182
+
Sbjct: 294 R 294
>gi|441513325|ref|ZP_20995156.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441451942|dbj|GAC53117.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 551
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
+D+ E R I+ SL+ D INIQ+TSGTTG PK A L+H N+ NN +G+
Sbjct: 163 WADLTATPSDEELARVADIAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGE 222
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L++ D +I L VP +H FG MG L A +HG+ V+P P+F P +L A+A+ +C
Sbjct: 223 LLDYTAED-RICLPVPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPRATLDAVAEHRC 279
>gi|183604885|gb|ACC64456.1| acid Co-A ligase [Ajellomyces capsulatus]
Length = 589
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
GT++ + P +R Q +L+ D N+QFTSG+TG+PKA+ LTH+NLINNS
Sbjct: 192 FGTYKDVILAGNVVPLSAVQRRQ--DTLSPFDVCNLQFTSGSTGNPKASMLTHHNLINNS 249
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R++F + D + P+FH FG +G+L + HG+ V PA +F P LRAI+
Sbjct: 250 RFIGDRMDFTEYD-ILCCPPPLFHCFGLVLGLLACITHGAKVVYPAETFDPEAVLRAISD 308
Query: 181 EKC 183
E+C
Sbjct: 309 ERC 311
>gi|170028423|ref|XP_001842095.1| short-chain-fatty-acid-CoA ligase [Culex quinquefasciatus]
gi|167874250|gb|EDS37633.1| short-chain-fatty-acid-CoA ligase [Culex quinquefasciatus]
Length = 784
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF ++ Q + + E + S++ G + FTSGTTG PKAA L+H+++INN++
Sbjct: 188 GTFNFQELFQFCTEQDVSKIEALQPSISPDSGACLLFTSGTTGKPKAALLSHFSIINNAS 247
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
R E D T+H+I +QV + H FG GI+ +M++GST V+P F S++AI +E
Sbjct: 248 ITSYRNELDSTNHRICVQVSLSHAFGLIDGIIGSMDYGSTMVLPGAKFNARSSVQAILQE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT +SD++ E +++N G + FTSGTTG PKAA L+H+ L+NN+
Sbjct: 631 GTISMSDLINLPTEHCISNIESTQRTINPDSGACLLFTSGTTGQPKAALLSHFGLLNNAA 690
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
R+ FD+ +I L VPMFH FG G ++ +GST VVP +F ++L+AI KE
Sbjct: 691 QGSYRMGFDRNQQRICLTVPMFHVFGLTFGAAASLTYGSTLVVPGVAFNAGETLQAIVKE 750
Query: 182 KC 183
KC
Sbjct: 751 KC 752
>gi|375097374|ref|ZP_09743639.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658107|gb|EHR52940.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 550
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E++ +L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I + VP
Sbjct: 177 ERLRATLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEAD-RICIPVP 235
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PA +F+P +LRA+ ++C
Sbjct: 236 FYHCFGMVMGNLAATSHGACMVIPAQAFEPAATLRAVQAQRC 277
>gi|398996064|ref|ZP_10698927.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398127852|gb|EJM17254.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 561
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ P R I +L D INIQFTSGTTG PK A LTH ++NN
Sbjct: 174 GFMRFSDLIAAGDPADESVR-HIGATLKNTDPINIQFTSGTTGSPKGAALTHRGILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++ TD ++ + VP+FH FG +G L A+ HG+ V P SF P+ L+A+ E
Sbjct: 233 FLGEAMKLTSTD-RLCIPVPLFHCFGMVVGNLAALTHGTAIVYPNDSFDPVAVLQAVQNE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|119503808|ref|ZP_01625890.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460316|gb|EAW41409.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 558
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMGTFRLS-----DIMQGAGPEYH-RRREQISKSLNCR 91
++ +P A +A LP R +RMGT + + + G G E + + L
Sbjct: 146 ADSKPGALQAQKLP--YLRTVIRMGTAETAGMPNFETVCGLGGEKDGDQLRALRGQLKPD 203
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG+PK A LTH N++NN G+ ++ +TD ++ + VP++H FG +
Sbjct: 204 DAINIQFTSGTTGNPKGATLTHCNILNNGYLAGEAMQLTETD-RLCIPVPLYHCFGMVLA 262
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L ++HGS V P +F P+++L+ + E C
Sbjct: 263 VLACVSHGSAMVFPGEAFDPLETLQTVEAEGC 294
>gi|327265061|ref|XP_003217327.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Anolis carolinensis]
Length = 727
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 6/148 (4%)
Query: 42 PSAYKADALP--TKLTRLALRM-GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF 98
P A K+ LP + + + ++ GTF + D+MQ + ++ + I K+L+ ++ INIQF
Sbjct: 315 PGALKSKRLPDLSIVVNVDAKLPGTFSIDDLMQAGDSSHKKQIQDIRKTLDSKEPINIQF 374
Query: 99 TSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNA 155
TSGTTG PK A L+H+N++NN+N I R+ E + + L VP++H G+ G
Sbjct: 375 TSGTTGSPKGATLSHHNIVNNANLIATRIRIGEGVSEESRCCLPVPLYHCLGSVAGCTVM 434
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
HG + V P+ SF +L+A+ EKC
Sbjct: 435 AIHGVSLVFPSLSFNAKATLKALDNEKC 462
>gi|196234603|ref|ZP_03133423.1| AMP-dependent synthetase and ligase [Chthoniobacter flavus
Ellin428]
gi|196221349|gb|EDY15899.1| AMP-dependent synthetase and ligase [Chthoniobacter flavus
Ellin428]
Length = 533
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A LTH+N++NN+ +IG+R+ D ++ + VP +H F
Sbjct: 190 TLDFDDVINIQYTSGTTGFPKGAMLTHHNILNNAFWIGERMRLTSRD-RLCIPVPFYHCF 248
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + L + HG+T V+PAP F P+ +L A+A E+C
Sbjct: 249 GMVLANLACVTHGATMVLPAPHFSPLQTLEAVALERC 285
>gi|300790301|ref|YP_003770592.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384153828|ref|YP_005536644.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399542181|ref|YP_006554843.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299799815|gb|ADJ50190.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340531982|gb|AEK47187.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398322951|gb|AFO81898.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 552
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+ L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D K+ + VP
Sbjct: 178 HLQAGLSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCNYTEHD-KVCIPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L +HG+ V+PAP+F P +L A+A E+C
Sbjct: 237 YHCFGMVMGNLACTSHGACMVIPAPAFDPRATLEAVAAERC 277
>gi|154271372|ref|XP_001536539.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409209|gb|EDN04659.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 589
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
GT++ + P +R Q +L+ D N+QFTSG+TG+PKA+ LTH+NLINNS
Sbjct: 192 FGTYKDVILAGNVVPLSAVQRRQ--DTLSPFDVCNLQFTSGSTGNPKASMLTHHNLINNS 249
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R++F + D + P+FH FG +G+L + HG+ V PA +F P LRAI+
Sbjct: 250 RFIGDRMDFTEYD-ILCCPPPLFHCFGLVLGLLACITHGAKVVYPAETFDPEAVLRAISD 308
Query: 181 EKC 183
E+C
Sbjct: 309 ERC 311
>gi|403279574|ref|XP_003931322.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 602
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP +++ GT L +++ + H + Q ++ L+C D I
Sbjct: 186 NAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQHLDQLQYTQQFLSCHDPI 245
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHK--ILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS IG+RL+ +KT K I+L P++H G+ G
Sbjct: 246 NIQFTSGTTGSPKGATLSHYNIVNNSILIGERLKLHEKTPEKLRIVLPCPLYHCLGSVGG 305
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + G+T ++ +P F +L AI++E+
Sbjct: 306 TMVCLMFGATLILSSPIFNGKKALEAISRER 336
>gi|383320319|ref|YP_005381160.1| acyl-CoA synthetase/AMP-acid ligase [Methanocella conradii HZ254]
gi|379321689|gb|AFD00642.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Methanocella conradii HZ254]
Length = 583
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 20/143 (13%)
Query: 41 RPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTS 100
+P Y D + LRMG D++ G + SL+ D INIQ+TS
Sbjct: 187 QPGMYTWDEM--------LRMGEEMPDDVLCG-----------VQCSLDFDDTINIQYTS 227
Query: 101 GTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160
GTTG PK LTH+N++NN FIG+ + F + D ++ + VP +H FG + + + HG+
Sbjct: 228 GTTGFPKGVMLTHHNILNNGYFIGECMSFTEKD-RLCIPVPFYHCFGMVLSNMACVTHGA 286
Query: 161 TTVVPAPSFKPMDSLRAIAKEKC 183
T V+PA F P+ +L A+ KE+C
Sbjct: 287 TMVLPAEYFDPVSTLSAVEKERC 309
>gi|403279576|ref|XP_003931323.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Saimiri boliviensis boliviensis]
Length = 572
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP +++ GT L +++ + H + Q ++ L+C D I
Sbjct: 156 NAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQHLDQLQYTQQFLSCHDPI 215
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHK--ILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS IG+RL+ +KT K I+L P++H G+ G
Sbjct: 216 NIQFTSGTTGSPKGATLSHYNIVNNSILIGERLKLHEKTPEKLRIVLPCPLYHCLGSVGG 275
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + G+T ++ +P F +L AI++E+
Sbjct: 276 TMVCLMFGATLILSSPIFNGKKALEAISRER 306
>gi|375102706|ref|ZP_09748969.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374663438|gb|EHR63316.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 548
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I L VP +H FG
Sbjct: 183 LGADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEAD-RICLPVPFYHCFG 241
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ V+PAP+F P +L A+ E+C
Sbjct: 242 MVMGNLAATSHGACMVIPAPAFDPGKTLEAVQAERC 277
>gi|384214527|ref|YP_005605691.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
gi|354953424|dbj|BAL06103.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
Length = 564
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 14/150 (9%)
Query: 47 ADALPTKLT--RLA-LRM----------GTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
A A P KLT RL LRM GT ++ + G ++ + + +L D
Sbjct: 146 AGAEPGKLTAARLPDLRMVIQIGGPAAPGTIPFEEVARMGGAQHREQLIALGAALQFDDP 205
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+NIQFTSGTTG PK LTH+N++NN F G+ + + D +I + VP++H FG MG L
Sbjct: 206 VNIQFTSGTTGSPKGVTLTHHNILNNGYFTGRAMHLTEQD-RICIPVPLYHCFGMVMGNL 264
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+T V P F P+ +LRA+ +EKC
Sbjct: 265 ASVTLGTTMVYPGEGFDPLATLRAVEQEKC 294
>gi|344173641|emb|CCA88810.1| long-chain-fatty-acid-CoA ligase [Ralstonia syzygii R24]
Length = 571
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A +A LP R +RMG T ++M + I+ +L+
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGTINFGEVMARGQGVSTGTLDAITAALSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 271 VLACTATGACMVFPGEAFDPLATLRTVAEERC 302
>gi|403279572|ref|XP_003931321.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 615
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP +++ GT L +++ + H + Q ++ L+C D I
Sbjct: 199 NAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQHLDQLQYTQQFLSCHDPI 258
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHK--ILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS IG+RL+ +KT K I+L P++H G+ G
Sbjct: 259 NIQFTSGTTGSPKGATLSHYNIVNNSILIGERLKLHEKTPEKLRIVLPCPLYHCLGSVGG 318
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + G+T ++ +P F +L AI++E+
Sbjct: 319 TMVCLMFGATLILSSPIFNGKKALEAISRER 349
>gi|15609642|ref|NP_217021.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
gi|15842033|ref|NP_337070.1| AMP-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31793685|ref|NP_856178.1| AMP-binding protein [Mycobacterium bovis AF2122/97]
gi|148662341|ref|YP_001283864.1| AMP-binding protein [Mycobacterium tuberculosis H37Ra]
gi|148823702|ref|YP_001288456.1| AMP-binding domain protein [Mycobacterium tuberculosis F11]
gi|167967650|ref|ZP_02549927.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
gi|253798415|ref|YP_003031416.1| AMP-binding protein [Mycobacterium tuberculosis KZN 1435]
gi|254232634|ref|ZP_04925961.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|254366808|ref|ZP_04982850.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551552|ref|ZP_05141999.1| AMP-binding domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289444036|ref|ZP_06433780.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289570665|ref|ZP_06450892.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289575210|ref|ZP_06455437.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289751114|ref|ZP_06510492.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289754614|ref|ZP_06513992.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289758637|ref|ZP_06518015.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|289762673|ref|ZP_06522051.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|294994388|ref|ZP_06800079.1| AMP-binding domain protein [Mycobacterium tuberculosis 210]
gi|297635113|ref|ZP_06952893.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297732104|ref|ZP_06961222.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN R506]
gi|298525977|ref|ZP_07013386.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776778|ref|ZP_07415115.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|306780544|ref|ZP_07418881.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|306785305|ref|ZP_07423627.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|306789659|ref|ZP_07427981.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|306793986|ref|ZP_07432288.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|306798381|ref|ZP_07436683.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|306804261|ref|ZP_07440929.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|306807698|ref|ZP_07444366.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|306968658|ref|ZP_07481319.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|306972889|ref|ZP_07485550.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|307080602|ref|ZP_07489772.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|307085188|ref|ZP_07494301.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|313659438|ref|ZP_07816318.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN V2475]
gi|339632531|ref|YP_004724173.1| fatty-acid-CoA ligase [Mycobacterium africanum GM041182]
gi|340627519|ref|YP_004745971.1| putative fatty-acid-CoA ligase FADD35 [Mycobacterium canettii CIPT
140010059]
gi|375295678|ref|YP_005099945.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 4207]
gi|385991815|ref|YP_005910113.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5180]
gi|385995434|ref|YP_005913732.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5079]
gi|385999285|ref|YP_005917584.1| AMP-binding protein [Mycobacterium tuberculosis CTRI-2]
gi|392387143|ref|YP_005308772.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|392431886|ref|YP_006472930.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 605]
gi|397674409|ref|YP_006515944.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|422813553|ref|ZP_16861925.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|424804843|ref|ZP_18230274.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|424948174|ref|ZP_18363870.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433627640|ref|YP_007261269.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|13882311|gb|AAK46884.1| substrate--CoA ligase [Mycobacterium tuberculosis CDC1551]
gi|31619278|emb|CAD97394.1| PROBABLE FATTY-ACID-COA LIGASE FADD35 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|124601693|gb|EAY60703.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|134152318|gb|EBA44363.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506493|gb|ABQ74302.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis H37Ra]
gi|148722229|gb|ABR06854.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis F11]
gi|253319918|gb|ACT24521.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 1435]
gi|289416955|gb|EFD14195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289539641|gb|EFD44219.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289544419|gb|EFD48067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289691701|gb|EFD59130.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289695201|gb|EFD62630.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289710179|gb|EFD74195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|289714201|gb|EFD78213.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|298495771|gb|EFI31065.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308214839|gb|EFO74238.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|308326610|gb|EFP15461.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|308330032|gb|EFP18883.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|308333876|gb|EFP22727.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|308337676|gb|EFP26527.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|308341357|gb|EFP30208.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|308345886|gb|EFP34737.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|308349149|gb|EFP38000.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|308353773|gb|EFP42624.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|308357716|gb|EFP46567.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|308361656|gb|EFP50507.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|308365268|gb|EFP54119.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|323718913|gb|EGB28067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|326904119|gb|EGE51052.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|328458183|gb|AEB03606.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 4207]
gi|339295388|gb|AEJ47499.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5079]
gi|339299008|gb|AEJ51118.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5180]
gi|339331887|emb|CCC27590.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium africanum
GM041182]
gi|340005709|emb|CCC44875.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140010059]
gi|344220332|gb|AEN00963.1| AMP-binding domain protein [Mycobacterium tuberculosis CTRI-2]
gi|358232689|dbj|GAA46181.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378545694|emb|CCE37972.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|379028808|dbj|BAL66541.1| acyl-CoA synthetase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053295|gb|AFM48853.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 605]
gi|395139314|gb|AFN50473.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|432155246|emb|CCK52492.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|440581981|emb|CCG12384.1| putative FATTY-ACID-CoA LIGASE FADD35 (FATTY-ACID-CoA SYNTHETASE)
(FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis
7199-99]
gi|444896038|emb|CCP45299.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|350403137|ref|XP_003486710.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Bombus impatiens]
Length = 567
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT R D+ + A R ++C DG NIQFTSGTTG PKA ++H +++NNS
Sbjct: 166 GTRRFIDVEELATRIETRWIAAEQDQISCHDGSNIQFTSGTTGRPKATLISHRSVMNNSK 225
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ E DHK+ L VP FH FG G++ ++ G T V+PA SF P+ SL AI +E
Sbjct: 226 QAAVKTEL-TVDHKVCLNVPFFHVFGIIKGLMCMLHAGITLVLPARSFNPVKSLEAIVRE 284
Query: 182 KC 183
KC
Sbjct: 285 KC 286
>gi|403279578|ref|XP_003931324.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Saimiri boliviensis boliviensis]
Length = 645
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP +++ GT L +++ + H + Q ++ L+C D I
Sbjct: 229 NAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQHLDQLQYTQQFLSCHDPI 288
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHK--ILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS IG+RL+ +KT K I+L P++H G+ G
Sbjct: 289 NIQFTSGTTGSPKGATLSHYNIVNNSILIGERLKLHEKTPEKLRIVLPCPLYHCLGSVGG 348
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + G+T ++ +P F +L AI++E+
Sbjct: 349 TMVCLMFGATLILSSPIFNGKKALEAISRER 379
>gi|289448150|ref|ZP_06437894.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
gi|289421108|gb|EFD18309.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|121638387|ref|YP_978611.1| AMP-binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990881|ref|YP_002645568.1| AMP-binding protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772241|ref|YP_005171974.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449064578|ref|YP_007431661.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494035|emb|CAL72513.1| Probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773994|dbj|BAH26800.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602425|emb|CCC65101.1| probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356594562|gb|AET19791.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449033086|gb|AGE68513.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|289746287|ref|ZP_06505665.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
gi|289686815|gb|EFD54303.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|443468114|ref|ZP_21058351.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442897184|gb|ELS24180.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 566
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS---LNCR 91
+N P ++ LP ++L F +QG E EQ+++ L
Sbjct: 144 ANAEPGTLASEKLPELRGVVSLADNPPAGFLAWSALQGRAAEV--SAEQLAERQALLQFD 201
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG PK A L+HYN++NN +G+ L + D ++++ VP++H FG MG
Sbjct: 202 DPINIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTEHD-RLVIPVPLYHCFGMVMG 260
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L M HGST + P +F P+ +LRA+A+EK
Sbjct: 261 NLGCMTHGSTMIYPGDAFDPLTTLRAVAEEK 291
>gi|433642703|ref|YP_007288462.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
gi|432159251|emb|CCK56555.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|444309582|ref|ZP_21145217.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
gi|443487034|gb|ELT49801.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
Length = 504
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 41 RPSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
RP + LP+ R +R+G D+ Q + Q++ L D I
Sbjct: 89 RPGHLMSGRLPS--LRCVIRLGAEQMPGMLNFDDVAQSGDEVTRQELAQLADELQFDDPI 146
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A L+H+N++NN F+G ++ + D ++ + VP +H FG +G L
Sbjct: 147 NIQFTSGTTGSPKGATLSHHNILNNGFFVGDAMQLSEQD-RLCIPVPFYHCFGMVLGNLA 205
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGS V+P SF P +L+ + +E+C
Sbjct: 206 CVTHGSCMVIPNDSFDPFLTLQTVEEEQC 234
>gi|433631621|ref|YP_007265249.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
gi|432163214|emb|CCK60616.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
Length = 547
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D + GA P+ +Q + L+ D +NIQ+TSGTT +PK L+H N++NN +G+ L
Sbjct: 166 DALAGAEPDLPAL-QQTAARLDGSDPVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGELL 224
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D +I + VP +H FG MG L A +HG+ V+PAP F P +LRA+ E+C
Sbjct: 225 GYTAQD-RICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRAVQDERC 279
>gi|17545161|ref|NP_518563.1| AMP-binding protein [Ralstonia solanacearum GMI1000]
gi|17427452|emb|CAD13970.1| putative fatty-acid--coa ligase transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 571
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 25/160 (15%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISK----------- 86
+ +P A +A LP R +RMG +GA P R E I++
Sbjct: 154 ATAQPGALRAAKLPA--LRWVIRMG--------EGATPGMIRFDEVIARGQGVPAGTLDA 203
Query: 87 ---SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+L+ D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++
Sbjct: 204 ITAALSPDDAINIQFTSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTD-RLCVPVPLY 262
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG M +L G+ V P +F P+ +LRA+A+E+C
Sbjct: 263 HCFGMVMSVLACAATGACMVFPGEAFDPLATLRAVAEERC 302
>gi|426237739|ref|XP_004012815.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Ovis aries]
Length = 572
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 158 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLARLRHTQQFLSCHDPINI 217
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 218 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 277
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F+ +L AI++E+
Sbjct: 278 VSLMHGVTLILCSPVFEGKKTLEAISRER 306
>gi|426237733|ref|XP_004012812.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Ovis aries]
Length = 615
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 201 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLARLRHTQQFLSCHDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F+ +L AI++E+
Sbjct: 321 VSLMHGVTLILCSPVFEGKKTLEAISRER 349
>gi|440910486|gb|ELR60280.1| Acyl-CoA synthetase family member 2, mitochondrial [Bos grunniens
mutus]
Length = 635
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 221 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLTRLRHTQQFLSCHDPINI 280
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 281 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 340
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F+ +L AI++E+
Sbjct: 341 VSLMHGVTLILCSPVFEGKKTLEAISRER 369
>gi|390463546|ref|XP_002748483.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Callithrix jacchus]
Length = 704
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P A K+ LP +++ GT L +++ + H + Q ++ L+C D I
Sbjct: 288 NAQPGALKSQRLPDLTIAISVDAPLPGTLLLDEVVAAGSTQQHLDQLQYTQQFLSCHDPI 347
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKT--DHKILLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNS+ IG+RL+ +KT + +++L P++H G+ G
Sbjct: 348 NIQFTSGTTGSPKGATLSHYNIVNNSSLIGERLKLHEKTPENLRMVLPSPLYHCLGSVGG 407
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK-CMEYLT 188
+ + +G+T ++ +P F +L AI+ E+ C Y T
Sbjct: 408 TMVCLMYGATLILSSPIFNGKKALEAISTERGCFLYGT 445
>gi|373949980|ref|ZP_09609941.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
gi|386324187|ref|YP_006020304.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|333818332|gb|AEG10998.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|373886580|gb|EHQ15472.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
Length = 570
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G F D++ + E I K+L+ D INIQFTSGTTG PK A L+H+N++NN
Sbjct: 181 VGMFNFDDLLVDVTADDKAALESIGKALSPYDSINIQFTSGTTGSPKGATLSHHNILNNG 240
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+ + ++F D K+ + VP++H FG +G L ++ G+ V P SF P+ +L+ I +
Sbjct: 241 YLVAEAMKFTCHD-KLCIPVPLYHCFGMVLGSLVCLSKGAAAVFPGESFDPLTTLQVIEQ 299
Query: 181 EKC 183
E+C
Sbjct: 300 ERC 302
>gi|300692553|ref|YP_003753548.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|299079613|emb|CBJ52291.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|344168821|emb|CCA81133.1| long-chain-fatty-acid-CoA ligase [blood disease bacterium R229]
Length = 571
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A +A LP R +RMG T ++M + I+ +L+
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGTINFGEVMARGQGVSTGTLDAITATLSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 271 VLACTATGACMVFPGEAFDPLATLRTVAEERC 302
>gi|426237735|ref|XP_004012813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Ovis aries]
Length = 602
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 188 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLARLRHTQQFLSCHDPINI 247
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 248 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 307
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F+ +L AI++E+
Sbjct: 308 VSLMHGVTLILCSPVFEGKKTLEAISRER 336
>gi|148683592|gb|EDL15539.1| mCG63314 [Mus musculus]
Length = 615
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L +I+ G E + + + ++ L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDNIVAAGGKEQNLAQLRYNQRFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNS IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRVVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG+T ++ PSF +L AI++EK
Sbjct: 321 VSMMHGATLLLSFPSFNGKKALEAISREK 349
>gi|189191344|ref|XP_001932011.1| short-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973617|gb|EDU41116.1| short-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 603
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 224 DVANLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMDLTPND-TLCCPPPLFHCFGLTLG 282
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V PA SF P+ +RAI +E+C
Sbjct: 283 VLAVLTHGAKIVFPAESFDPVACMRAIDEERC 314
>gi|197099966|ref|NP_001125938.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Pongo
abelii]
gi|75061807|sp|Q5R9G9.1|ACSF2_PONAB RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|55729725|emb|CAH91591.1| hypothetical protein [Pongo abelii]
Length = 615
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 39 NPRPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGI 94
N +P K+ LP T +++ GT L +++ H + Q ++ L+C D I
Sbjct: 199 NAQPGGLKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPI 258
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMFHTFGTAMG 151
NIQFTSGTTG PK A L+HYN++NNSN +G+RL+ +KT ++ +L P++H G+ G
Sbjct: 259 NIQFTSGTTGSPKGATLSHYNIVNNSNMLGERLKLHEKTPEQLRMILPSPLYHCLGSVGG 318
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +G+T ++ +P F +L AI++E+
Sbjct: 319 TMMCLMYGATLILASPVFNGKKALEAISRER 349
>gi|410090765|ref|ZP_11287350.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
gi|409761922|gb|EKN46964.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
Length = 557
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 11/148 (7%)
Query: 42 PSAYKADALPTKLTRLALR------MGTFR-LSDIMQGAGPEYHRRREQISKSLNCRDGI 94
P A+ ++ALP ++L M +R L + + P+ R + SL D I
Sbjct: 146 PGAWHSEALPELRGVISLADSPPSGMLAWRALHSLAESTPPDALELR---AASLEVCDPI 202
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQ+TSGTTG PK A L+H N++NN +G L D ++++ VP++H FG MG L
Sbjct: 203 NIQYTSGTTGFPKGATLSHRNILNNGYMVGYNLGLGSED-RLVIPVPLYHCFGMVMGNLA 261
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ HG+T + PAPSF+P+ +L A+A E+
Sbjct: 262 CLTHGATMIYPAPSFEPLATLEAVASER 289
>gi|426237737|ref|XP_004012814.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Ovis aries]
Length = 455
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E + R + L+C D INI
Sbjct: 41 QPGALKSQRLPDLTTVISVDAHLPGTLLLDEVVAAGSQEQNLARLRHTQQFLSCHDPINI 100
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK---TDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NN+N IG+RL + + +++L P++H G+ G +
Sbjct: 101 QFTSGTTGSPKGATLSHYNIVNNANMIGQRLRLHQKTPEESRVVLPSPLYHCLGSVGGTM 160
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG T ++ +P F+ +L AI++E+
Sbjct: 161 VSLMHGVTLILCSPVFEGKKTLEAISRER 189
>gi|345805217|ref|XP_537673.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Canis lupus familiaris]
Length = 642
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P + K+ LP T +++ GT L ++++ E H + + ++ L+C D INI
Sbjct: 228 QPGSLKSQRLPELTTVISVDDPLPGTLLLDEVVETGSKEQHLAQLRYTQQFLSCHDPINI 287
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD---KTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+HYN++NNSN IG RL+ + +++L P++H G+ G +
Sbjct: 288 QFTSGTTGNPKGATLSHYNIVNNSNLIGDRLKMHLKPPEEKRMILPSPLYHCLGSVGGTM 347
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ +G+T ++ +P+F +L AI+KE+
Sbjct: 348 VSVMYGTTLILSSPTFNGKKALEAISKER 376
>gi|315445796|ref|YP_004078675.1| acyl-CoA synthetase [Mycobacterium gilvum Spyr1]
gi|315264099|gb|ADU00841.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
gilvum Spyr1]
Length = 538
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RRR S +L+ RD INIQ+TSGTTG PK A L+H N++NN F+ +++ D ++ +
Sbjct: 172 RRR---SGALSNRDPINIQYTSGTTGFPKGATLSHRNILNNGFFVTEQIRLQPGD-RLCI 227
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L HG+T V+PAP+F P +LRAI E+C
Sbjct: 228 PVPFYHCFGMVMGNLGCTTHGATIVIPAPAFDPGLTLRAIETERC 272
>gi|145225443|ref|YP_001136121.1| AMP-binding domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|145217929|gb|ABP47333.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length = 538
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RRR S +L+ RD INIQ+TSGTTG PK A L+H N++NN F+ +++ D ++ +
Sbjct: 172 RRR---SGALSNRDPINIQYTSGTTGFPKGATLSHRNILNNGFFVTEQIRLQPGD-RLCI 227
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L HG+T V+PAP+F P +LRAI E+C
Sbjct: 228 PVPFYHCFGMVMGNLGCTTHGATIVIPAPAFDPGLTLRAIETERC 272
>gi|116748562|ref|YP_845249.1| AMP-binding domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697626|gb|ABK16814.1| AMP-dependent synthetase and ligase [Syntrophobacter fumaroxidans
MPOB]
Length = 548
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+Y R+E+ L+ D +N+Q+TSGTTG PK LTH+NL+NN +IGK F D +
Sbjct: 181 QYRARQEE----LDVHDVVNMQYTSGTTGFPKGVMLTHFNLVNNGYWIGKNQLFGPED-R 235
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
I L VP+FH FG ++G++ A+NHGS V+ F P+ ++ A+ KE+C
Sbjct: 236 ICLPVPLFHCFGCSLGVMAAVNHGSALVI-LEGFDPVSAMTAVEKERC 282
>gi|365098013|ref|ZP_09331777.1| AMP-binding domain protein [Acidovorax sp. NO-1]
gi|363413149|gb|EHL20358.1| AMP-binding domain protein [Acidovorax sp. NO-1]
Length = 576
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD+M G R Q++ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 186 GLLRFSDLM-ARGDVADPRLAQVAATLRATDPINIQFTSGTTGFPKGATLTHRNILNNGF 244
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HGS V P F P+ L+ + E
Sbjct: 245 FIGECMKLTP-DDRLCIPVPLYHCFGMVLGNLACLTHGSAIVYPNDGFDPLTVLQTVQDE 303
Query: 182 KC 183
+C
Sbjct: 304 RC 305
>gi|359446340|ref|ZP_09236030.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
gi|358039848|dbj|GAA72279.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
Length = 577
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F +++M + + ++K+L+C INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + + F + D K+ + VP++H FG +G L ++ G+ + P+ SF P +L + +E
Sbjct: 249 LVAQAMHFTERD-KLCIPVPLYHCFGMVLGSLLCVSKGAAAIYPSDSFDPKTTLEVVQQE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
>gi|315126511|ref|YP_004068514.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015025|gb|ADT68363.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
Length = 577
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F +++M + + ++K+L+C INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + + F + D K+ + VP++H FG +G L ++ G+ + P+ SF P +L + +E
Sbjct: 249 LVAQAMHFTERD-KLCIPVPLYHCFGMVLGSLLCVSKGAAAIYPSDSFDPKTTLEVVQQE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
>gi|333915332|ref|YP_004489064.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333745532|gb|AEF90709.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 564
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMGT----FRLSDIMQGAGPEYHRRREQISKSLNCR-- 91
S P ++ LP+ T + + GT R SD++ P +Q SL R
Sbjct: 146 SGAVPGRLESAKLPSLKTVIQIGNGTVPGFMRFSDLLATGDPA-----DQAVHSLGARLR 200
Query: 92 --DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTA 149
D INIQFTSGTTG PK A LTH N++NN FIG+ + D ++ + VP++H FG
Sbjct: 201 STDAINIQFTSGTTGSPKGATLTHRNVLNNGFFIGEAMRLSP-DDRLCIPVPLYHCFGMV 259
Query: 150 MGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L A+ HG+T V P +F+ + LRA+ E+C
Sbjct: 260 VGNLAALTHGTTIVYPNDAFEAVSVLRAVQDERC 293
>gi|88602899|ref|YP_503077.1| AMP-dependent synthetase/ligase [Methanospirillum hungatei JF-1]
gi|88188361|gb|ABD41358.1| AMP-dependent synthetase and ligase [Methanospirillum hungatei
JF-1]
Length = 571
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ D+++ A + +L+ D INIQ+TSGTTG+PK LTH+ ++NN
Sbjct: 177 GMYQWDDLLKKAESISQDELREREAALDFDDAINIQYTSGTTGYPKGVVLTHHGVLNNGY 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG+ + F + D ++ + VP +H FG + + ++HGST V+P P+F P D LR I E
Sbjct: 237 IIGEGMGFTEKD-RLCIPVPFYHCFGMVLSNMACVSHGSTMVIPGPAFDPGDVLRTIEAE 295
Query: 182 KC 183
+C
Sbjct: 296 RC 297
>gi|384567576|ref|ZP_10014680.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
gi|384523430|gb|EIF00626.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
Length = 548
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ L D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I + VP
Sbjct: 178 RVRAELGADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEED-RICIPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+PAP+F P +L A+ E+C
Sbjct: 237 YHCFGMVMGNLAATSHGACMVIPAPAFDPKKTLEAVQAERC 277
>gi|359436951|ref|ZP_09227027.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358028325|dbj|GAA63276.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
Length = 577
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F +++M + + ++K+L+C INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + + F + D K+ + VP++H FG +G L ++ G+ + P+ SF P +L + +E
Sbjct: 249 LVAQAMHFTERD-KLCIPVPLYHCFGMVLGSLLCVSKGAAAIYPSDSFDPKTTLEVVQQE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
>gi|383830174|ref|ZP_09985263.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
gi|383462827|gb|EID54917.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
Length = 560
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I + VP +H F
Sbjct: 182 ALGADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEED-RICIPVPFYHCF 240
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L A HG+ V+PAPSF P +L A+ E+C
Sbjct: 241 GMVMGNLAATTHGACMVIPAPSFDPKRTLEAVQAERC 277
>gi|323527839|ref|YP_004229992.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
gi|323384841|gb|ADX56932.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
Length = 576
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGI 94
P +A LP R +RM G SD++ QG R ++I +L+C + I
Sbjct: 162 PGQLRAARLPA--LRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARLDEIGNTLSCHEAI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + ++ D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLNEHD-ALCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P +L A+A+E+C
Sbjct: 279 CVSVGANMVFPGEAFDPAATLAAVAEEQC 307
>gi|156032527|ref|XP_001585101.1| hypothetical protein SS1G_13961 [Sclerotinia sclerotiorum 1980]
gi|154699363|gb|EDN99101.1| hypothetical protein SS1G_13961 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 599
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E++ ++ D +N+QFTSG+TG PKAA LTH+NL+NN+N IG RL F D + P
Sbjct: 194 ERVKNTVKPDDIVNLQFTSGSTGSPKAAMLTHFNLVNNANSIGDRLAFTSQD-ILCCPPP 252
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G+L + HG+ ++PA +F LRA++ EKC
Sbjct: 253 LFHCFGLVLGVLAIITHGAKIILPAETFDASAVLRAVSDEKC 294
>gi|453050271|gb|EME97816.1| AMP-binding domain protein [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 543
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 16/143 (11%)
Query: 41 RPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTS 100
R Y D+ T L RL GAG R E+ +L D +NIQ+TS
Sbjct: 147 RDVVYLDDSTWTGLVRL--------------GAGTPRERLAER-EAALRPEDPVNIQYTS 191
Query: 101 GTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160
GTTG K A L+H N++NN F+G+ L + + D +I L VP +H FG MG L A HG+
Sbjct: 192 GTTGFAKGATLSHRNILNNGYFVGETLGYTEED-RIALPVPFYHCFGMVMGNLAATTHGA 250
Query: 161 TTVVPAPSFKPMDSLRAIAKEKC 183
V+PAP F P +L A+ +E+C
Sbjct: 251 CVVIPAPVFDPTATLHAVERERC 273
>gi|284041712|ref|YP_003392052.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
gi|283945933|gb|ADB48677.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
Length = 545
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D I+IQ+TSGTTG PK A L+H+NL+NN +G+ + + + D +I L VP +H F
Sbjct: 177 TLSFDDPIDIQYTSGTTGAPKGATLSHHNLLNNGFLVGELIHYSEHD-RICLPVPFYHCF 235
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L A +HG+ V+P+ F P+ +LRA+A+E+C
Sbjct: 236 GMVMGNLAATSHGACMVIPSAGFDPLATLRAVAQERC 272
>gi|354478459|ref|XP_003501432.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Cricetulus griseus]
gi|344252178|gb|EGW08282.1| Acyl-CoA synthetase family member 2, mitochondrial [Cricetulus
griseus]
Length = 615
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K+ LP T +++ GT L D++ E + + + + L+C D INI
Sbjct: 201 QPGALKSKRLPDLTTVISVDAPLPGTLLLDDVVAAGSKEQNLAQLRYHQQFLSCHDSINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG PK A L+HYN++NNS IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGSPKGATLSHYNIVNNSKLIGQRLKLHTKTAEELRLVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M +G T ++ +PSF +L AI++EK
Sbjct: 321 VSMMYGVTLLLSSPSFNGKKALEAISREK 349
>gi|453075501|ref|ZP_21978287.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
gi|452762927|gb|EME21214.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
Length = 561
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 199 SLSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEAD-RVCIPVPFYHCF 257
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+ V+PAP+F P +L A+ E+C
Sbjct: 258 GMVMGNLACTSHGAAMVIPAPAFDPKATLDAVQAERC 294
>gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Neptuniibacter caesariensis]
gi|89083438|gb|EAR62656.1| acyl-CoA synthase [Oceanospirillum sp. MED92]
Length = 562
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R +D ++ A + E+I L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 173 GMWRWADFVEMAEKIDMSQLERIQSELQFDDPINIQYTSGTTGFPKGAALSHHNILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F + D ++++ VP++H FG MG L + HG+T + P +F+P L A+A+E
Sbjct: 233 FVAESMNFTEKD-RLVIPVPLYHCFGMVMGNLGCITHGATMIYPDDAFEPKSVLEAVAEE 291
Query: 182 KC 183
+
Sbjct: 292 RA 293
>gi|84495288|ref|ZP_00994407.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
gi|84384781|gb|EAQ00661.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
Length = 550
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G +D++ A R + I L+ D INIQ+TSGTTG PK A L+H N++NN
Sbjct: 156 IGQQSWADLVALADGVSDERLQLIGAELSPDDAINIQYTSGTTGFPKGATLSHRNILNNG 215
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+G+ + + D +I + VP +H FG MG L A HG+ V+PAP F P +L A A+
Sbjct: 216 YMVGEICGYTEVD-RICIPVPFYHCFGMVMGNLAATTHGACMVIPAPGFDPNLTLTATAE 274
Query: 181 EKC 183
EKC
Sbjct: 275 EKC 277
>gi|126437383|ref|YP_001073074.1| AMP-binding domain-containing protein [Mycobacterium sp. JLS]
gi|126237183|gb|ABO00584.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 540
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 47 ADALPTKLTRL--ALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTG 104
D + + TRL + +GT + + +GA R L+ RD +NIQ+TSGTTG
Sbjct: 134 VDEVRARCTRLREVVYLGTDDWAALRRGADAVSVGRLRNCMAELDSRDPVNIQYTSGTTG 193
Query: 105 HPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164
PK A L+H N++NN F+ + + TD ++ + VP +H FG MG L HG+T V+
Sbjct: 194 FPKGATLSHRNIVNNGFFVTELIGLGPTD-RLCIPVPFYHCFGMVMGNLGCTTHGATMVI 252
Query: 165 PAPSFKPMDSLRAIAKEKC 183
PAP F +L AI KE+C
Sbjct: 253 PAPGFDAGLTLAAIEKERC 271
>gi|299067998|emb|CBJ39212.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CMR15]
Length = 571
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A +A LP R +RMG R ++M + I+ +L+
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGMIRFDEVMARGQGVPAGTLDAIAAALSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNIVNNARFVAMAMNLQGTD-RLCVPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 271 VLACAATGACMVFPGEAFDPLATLRTVAEERC 302
>gi|91789999|ref|YP_550951.1| AMP-binding domain-containing protein [Polaromonas sp. JS666]
gi|91699224|gb|ABE46053.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
Length = 577
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ P+ R E ++++L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 187 GLLRFSALLASGQPQDPRLAE-VARTLKAGDPINIQFTSGTTGFPKGATLTHRNILNNGF 245
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HG+T V P F P+ L+ + E
Sbjct: 246 FIGEAMKLTPAD-RLCIPVPLYHCFGMVLGNLACLTHGATIVYPNDGFDPLSVLQTVQDE 304
Query: 182 KC 183
KC
Sbjct: 305 KC 306
>gi|254385476|ref|ZP_05000803.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
gi|194344348|gb|EDX25314.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
Length = 546
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
R +D+++ R + L+ D INIQ+TSGTTG PK A L+H+N++NN F+G
Sbjct: 161 RWTDLLERGRQGDPARLARAQAELSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + + D ++ + VP +H FG MG L +HG+ V+PAPSF+P +L A+ E C
Sbjct: 221 ELCHYTELD-RVCIPVPFYHCFGMVMGNLACTSHGAAMVIPAPSFEPAATLAAVEAESC 278
>gi|421595874|ref|ZP_16039823.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404272017|gb|EJZ35748.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 469
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 68 DIMQGAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR 126
D + G G + HR++ + + L D +NIQFTSGTTG PK LTH+N++NN F+G+
Sbjct: 84 DEVAGMGGDRHRQQLAALGQELQFDDPVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRA 143
Query: 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ ++ D +I + VP++H FG MG L ++ G+ V P F P+ +LR I +EKC
Sbjct: 144 MRLNEQD-RICIPVPLYHCFGMVMGNLASVTLGAAMVYPGEGFDPLATLRTIEQEKC 199
>gi|386001613|ref|YP_005919912.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
gi|357209669|gb|AET64289.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
Length = 569
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 38 SNPRPSAYKADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHR---RREQISKSLNC 90
+ P ++LP T + +R G + ++++ G E H R EQ +SL+
Sbjct: 147 AEAEPGKISCESLPYLKTAVLIRGERQPGMYTWEEVLK-MGDEVHDDVLRAEQ--ESLDF 203
Query: 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150
D INIQ+TSGTTG PK LTH+N++NN FIG+ ++F D ++ + VP +H FG +
Sbjct: 204 DDPINIQYTSGTTGFPKGVVLTHHNILNNGYFIGECMKFTDQD-RLCIPVPFYHCFGMVL 262
Query: 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ M HG+ V+PA F P +L A+ +E+C
Sbjct: 263 SNMACMTHGAAMVLPAEYFDPASTLAAVERERC 295
>gi|325087402|gb|EGC40712.1| long-chain-fatty-acid-CoA ligase [Ajellomyces capsulatus H88]
Length = 589
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
GT++ + P +R Q +L+ D N+QFTSG+TG+PKA+ LTH+NLINNS
Sbjct: 192 FGTYKDVILAGNVVPLSAVQRRQ--DTLSPFDVCNLQFTSGSTGNPKASMLTHHNLINNS 249
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG R++F + D + P+FH FG +G+L + HG+ V PA +F P LR I+
Sbjct: 250 RFIGDRMDFTEYD-ILCCPPPLFHCFGLVLGLLACITHGAKVVYPAETFDPEAVLRTISD 308
Query: 181 EKCMEY 186
E+C +
Sbjct: 309 ERCTAF 314
>gi|383315473|ref|YP_005376315.1| acyl-CoA synthetase [Frateuria aurantia DSM 6220]
gi|379042577|gb|AFC84633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frateuria
aurantia DSM 6220]
Length = 569
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 30 DKIRPGRESNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIMQGAGPEYHRRREQIS 85
D + P R + RP ++ LP + L G R S++ A R ++
Sbjct: 144 DDLIPERHES-RPGELQSRRLPALRELILLDEQPEPGMRRWSELRVLADEAALSRLAEVE 202
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
L+ D +NIQFTSGTTG PK A LTH+N++NN FIG+ ++ + D ++ + VP +H
Sbjct: 203 SGLDFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGFFIGEAMQLTEAD-RLCIPVPFYHC 261
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G + A+ HG+ V+P F + +L+A+A E+C
Sbjct: 262 FGMVLGNMAAVTHGACMVIPGEGFDVLATLQAVAAERC 299
>gi|423132663|ref|ZP_17120310.1| hypothetical protein HMPREF9715_00085 [Myroides odoratimimus CIP
101113]
gi|423328274|ref|ZP_17306081.1| hypothetical protein HMPREF9711_01655 [Myroides odoratimimus CCUG
3837]
gi|371650040|gb|EHO15514.1| hypothetical protein HMPREF9715_00085 [Myroides odoratimimus CIP
101113]
gi|404605177|gb|EKB04790.1| hypothetical protein HMPREF9711_01655 [Myroides odoratimimus CCUG
3837]
Length = 537
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I S+ + +NIQ+TSGTTG PK LTH+N++NN FIGKRL++ TD ++ + VP +
Sbjct: 174 IEDSVQFGEAVNIQYTSGTTGFPKGVTLTHHNILNNGYFIGKRLKYTTTD-RVCIPVPFY 232
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L +HG+T V+P F P +L+ + EKC
Sbjct: 233 HCFGMVIGNLCCTSHGATIVIPNDGFDPAKTLQVVQDEKC 272
>gi|432925696|ref|XP_004080733.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oryzias latipes]
Length = 401
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F D+MQ AG ++ ++ + + K + D INIQFTSGTTG PK A L+H+N++NN+
Sbjct: 216 GMFHFDDVMQAAGSQHMQQLQDLQKKIVFDDPINIQFTSGTTGVPKGATLSHHNIVNNAY 275
Query: 122 FIGKRLEFDKTDH-KILLQVPMFHTFGTA-MGILNAMNHGSTTVVPAPSFKPMDSLRAIA 179
F+G+R+ + H ++ + VP++H FG+ GI+ A+ HG+T V P+ + ++ A+
Sbjct: 276 FVGRRVGYHWKPHTRVCVPVPLYHCFGSVGAGIVMAV-HGTTIVFPSAGYDGKANIAAVE 334
Query: 180 KEKC 183
E+C
Sbjct: 335 SERC 338
>gi|392555397|ref|ZP_10302534.1| AMP-binding domain protein [Pseudoalteromonas undina NCIMB 2128]
Length = 577
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F ++++ + + ++K+LNC INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMFSFNEVLAMPTDAHKFELQAVAKTLNCNQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + + F + D K+ + VP++H FG +G L ++ G+ + P+ SF P +L + +E
Sbjct: 249 LVAQAMHFTEHD-KLCIPVPLYHCFGMVLGSLLCVSKGAAAIYPSDSFDPKTTLEVVQQE 307
Query: 182 KC 183
KC
Sbjct: 308 KC 309
>gi|423129005|ref|ZP_17116680.1| hypothetical protein HMPREF9714_00080 [Myroides odoratimimus CCUG
12901]
gi|371649847|gb|EHO15323.1| hypothetical protein HMPREF9714_00080 [Myroides odoratimimus CCUG
12901]
Length = 537
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I S+ + +NIQ+TSGTTG PK LTH+N++NN FIGKRL++ TD ++ + VP +
Sbjct: 174 IEDSVQFGEAVNIQYTSGTTGFPKGVTLTHHNILNNGYFIGKRLKYTTTD-RVCIPVPFY 232
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L +HG+T V+P F P +L+ + EKC
Sbjct: 233 HCFGMVIGNLCCTSHGATIVIPNDGFDPAKTLQVVQDEKC 272
>gi|352100941|ref|ZP_08958452.1| AMP-binding domain protein [Halomonas sp. HAL1]
gi|350600862|gb|EHA16919.1| AMP-binding domain protein [Halomonas sp. HAL1]
Length = 573
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD+M A + + +L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 177 GMWRWSDLMNEASKVSQTDVDDLQATLQFDDAINIQYTSGTTGFPKGATLSHHNILNNGF 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L M HG+T + P F P L+A+ ++
Sbjct: 237 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCMTHGATMIYPDEGFDPGKVLKAVHEQ 295
Query: 182 K 182
K
Sbjct: 296 K 296
>gi|418528737|ref|ZP_13094681.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
gi|371454214|gb|EHN67222.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
Length = 582
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S +M G R + I+ +L+ D INIQFTSGTTG PK A LTH N++NN
Sbjct: 192 GMLRFSQLM-AQGTSADERIDAIAATLSNHDPINIQFTSGTTGFPKGATLTHRNILNNGF 250
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGST V P F P+ L A+ E
Sbjct: 251 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSTIVYPNDGFDPLTVLEAVQAE 309
Query: 182 KC 183
KC
Sbjct: 310 KC 311
>gi|220920334|ref|YP_002495635.1| AMP-binding domain-containing protein [Methylobacterium nodulans
ORS 2060]
gi|219944940|gb|ACL55332.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
Length = 564
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT + + + AG R + +L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 174 GTLPFAAVAERAGATERDRISAHAGALQFDDPVNIQFTSGTTGSPKGVTLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D +I + VP++H FG MG L A++ G+ V P F P+ +LRA+ E
Sbjct: 234 FVGRAMRLSPED-RICIPVPLYHCFGMVMGNLAAVSSGAAMVYPGEGFDPLATLRAVEAE 292
Query: 182 KC 183
+C
Sbjct: 293 RC 294
>gi|111023051|ref|YP_706023.1| AMP-binding protein [Rhodococcus jostii RHA1]
gi|110822581|gb|ABG97865.1| CoA ligase [Rhodococcus jostii RHA1]
Length = 545
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H FG MG
Sbjct: 188 DPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCFGMVMG 246
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L +HG+T ++P PSF P +L+A+ EKC
Sbjct: 247 NLACTSHGATMIIPGPSFDPTATLQAVEAEKC 278
>gi|74146500|dbj|BAE32109.1| unnamed protein product [Mus musculus]
Length = 615
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K++ LP T +++ GT L I+ G E + + + ++ L+C D INI
Sbjct: 201 QPGALKSERLPDLTTVISVDAPLPGTLLLDYIVAAGGKEQNLAQLRYNQRFLSCYDPINI 260
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF---DKTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+H+N++NNS IG+RL+ + +++L P++H G+ G +
Sbjct: 261 QFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHCLGSVGGTM 320
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+M HG+T ++ +PSF +L AI++EK
Sbjct: 321 VSMMHGATLLLSSPSFNGKKALEAISREK 349
>gi|407715183|ref|YP_006835748.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
gi|407237367|gb|AFT87566.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
Length = 576
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGI 94
P +A LP R +RM G SD++ QG R ++I +L+C + I
Sbjct: 162 PGQLRAARLPA--LRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARLDEIGNTLSCHEAI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEHD-ALCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P +L A+A+E+C
Sbjct: 279 CVSVGANMVFPGEAFDPAATLAAVAEEQC 307
>gi|410462439|ref|ZP_11316019.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984446|gb|EKO40755.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 551
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+ NC D +N+Q+TSGTTG PK L+H+N++NN IG+R F D K+L+ VP+FH F
Sbjct: 189 TFNCHDVVNMQYTSGTTGFPKGVMLSHHNILNNGYSIGQRQRFTNKD-KLLIHVPLFHCF 247
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G++ +NHG TT+V F P+ S+ +I +EKC
Sbjct: 248 GCVLGVMACLNHG-TTMVFTEVFDPIKSMMSIEQEKC 283
>gi|448746178|ref|ZP_21727846.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445566040|gb|ELY22147.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 567
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD+M+ A + + +L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 177 GMWRWSDLMKEANKVSQTDVDDLQATLQFDDAINIQYTSGTTGFPKGATLSHHNILNNGF 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L M HG+T + P F P L+A+ +
Sbjct: 237 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCMTHGATMIYPDEGFDPGKVLKAVHDQ 295
Query: 182 K 182
K
Sbjct: 296 K 296
>gi|407919865|gb|EKG13086.1| AMP-dependent synthetase/ligase [Macrophomina phaseolina MS6]
Length = 417
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++S LN D N+QFTSG+TG+PKAA LTH+N++NNS FIG R+ F D + P+
Sbjct: 210 RVSSGLNTHDVCNLQFTSGSTGNPKAAMLTHHNIVNNSRFIGDRMAFTPED-VLACPPPL 268
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G++ + HGS V+P F +LRA++ E+C
Sbjct: 269 FHCFGLVLGLMACVTHGSKLVLPGEVFDAEATLRAVSDEQC 309
>gi|118386067|ref|XP_001026155.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89307922|gb|EAS05910.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 605
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
HRR K+ D NIQFTSGTTG PK A LTH+N++N+ FIG+RL + K D I
Sbjct: 236 HRRM----KATTPDDATNIQFTSGTTGRPKGATLTHFNILNDGYFIGERLGYTKDD-SIC 290
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ VP++H FG +G L A+N+GST V+P+ F ++ A+ K KC
Sbjct: 291 VPVPLYHCFGMVIGNLTAINYGSTIVLPSEGFSAQKAMEAVTKYKC 336
>gi|374705636|ref|ZP_09712506.1| AMP-binding domain protein [Pseudomonas sp. S9]
Length = 556
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+C INIQ+TSGTTG PK A L+H+N++NN +G+ L + D ++++ VP++H F
Sbjct: 197 TLHCEQAINIQYTSGTTGAPKGATLSHFNILNNGYMVGESLGLSEHD-RMVIPVPLYHCF 255
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G MG L + HGST + P F+P SL+A+A+E+
Sbjct: 256 GMVMGNLGCVTHGSTMIYPCAGFEPEASLQAVAQER 291
>gi|77459877|ref|YP_349384.1| AMP-binding protein [Pseudomonas fluorescens Pf0-1]
gi|77383880|gb|ABA75393.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens
Pf0-1]
Length = 565
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ PE R R S SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLAASVSPEQLRER---SDSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAAD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|403508875|ref|YP_006640513.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799440|gb|AFR06850.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 542
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ +L+ D INIQ+TSGTTG PK A L+H+N++NN +G+ L + + D +I L VP
Sbjct: 178 EVEATLSPDDPINIQYTSGTTGFPKGATLSHHNILNNGFSVGELLGYTEID-RIALPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+P P F+P +L A+ EKC
Sbjct: 237 YHCFGMVMGNLAATSHGACMVIPGPGFEPATALDAVQAEKC 277
>gi|330912779|ref|XP_003296069.1| hypothetical protein PTT_04700 [Pyrenophora teres f. teres 0-1]
gi|311332076|gb|EFQ95830.1| hypothetical protein PTT_04700 [Pyrenophora teres f. teres 0-1]
Length = 588
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 224 DVANLQFTSGSTGKPKAAMLTHHNLVNNSRFIGDRMDLTPND-TLCCPPPLFHCFGLTLG 282
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V PA SF P +RAI +E+C
Sbjct: 283 VLAVLTHGAKIVFPAESFDPAACMRAIDEERC 314
>gi|398974125|ref|ZP_10684862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
gi|398142009|gb|EJM30914.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
Length = 565
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ PE R R S SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLAASVSPEQLRER---SDSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAAD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|239906600|ref|YP_002953341.1| AMP-binding domain protein [Desulfovibrio magneticus RS-1]
gi|239796466|dbj|BAH75455.1| putative fatty-acid--CoA ligase [Desulfovibrio magneticus RS-1]
Length = 551
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+ NC D +N+Q+TSGTTG PK L+H+N++NN IG+R F D K+L+ VP+FH F
Sbjct: 189 TFNCHDVVNMQYTSGTTGFPKGVMLSHHNILNNGYSIGQRQRFTNKD-KLLIHVPLFHCF 247
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G++ +NHG TT+V F P+ S+ +I +EKC
Sbjct: 248 GCVLGVMACLNHG-TTMVFTEVFDPVKSMMSIEQEKC 283
>gi|282164394|ref|YP_003356779.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
gi|282156708|dbj|BAI61796.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
Length = 569
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ D INI +TSGTTG PK LTH+NL+NN FIG+ + F D ++ + VP +H F
Sbjct: 200 SLDFDDPINIMYTSGTTGFPKGVVLTHHNLVNNGYFIGECMRFTDKD-RLCIPVPFYHCF 258
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + L M HG+T V+PA F P+ +L AI KE+C
Sbjct: 259 GMVLSNLACMTHGATMVIPAEYFDPISTLTAIEKERC 295
>gi|119494285|ref|XP_001264038.1| long-chain-fatty-acid-CoA ligase, putative [Neosartorya fischeri
NRRL 181]
gi|119412200|gb|EAW22141.1| long-chain-fatty-acid-CoA ligase, putative [Neosartorya fischeri
NRRL 181]
Length = 590
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R+ D + P+FH FG
Sbjct: 209 LHSTDVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMNLTSFD-TLCCPPPLFHCFG 267
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+L + HGS + P+ +F P LRAI+ EKC
Sbjct: 268 LVLGMLAVVTHGSKIIFPSETFDPTAVLRAISDEKC 303
>gi|152988530|ref|YP_001348039.1| AMP-binding protein [Pseudomonas aeruginosa PA7]
gi|150963688|gb|ABR85713.1| acyl-CoA synthase [Pseudomonas aeruginosa PA7]
Length = 561
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAEAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYLVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAQD-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|441509013|ref|ZP_20990935.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441447018|dbj|GAC48896.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 547
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
Q + +L+ D INIQ+TSGTTG PK A LTH N+ NN +G+ L + ++D +I + VP
Sbjct: 178 QGASTLHPDDPINIQYTSGTTGFPKGATLTHSNISNNGYLVGELLAYTESD-RIAIPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+P+P+F P +LRA+A +C
Sbjct: 237 YHCFGMVMGNLAATSHGAAMVIPSPTFDPEAALRAVADYRC 277
>gi|317419689|emb|CBN81726.1| Acyl-CoA synthetase family member 2, mitochondrial [Dicentrarchus
labrax]
Length = 554
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 5/157 (3%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLAL---RMGTFRLSDIMQGAGPEYHRRREQISKS 87
+I P ES+ P K+ LP + + L + G D+M+ +Y ++ + + K+
Sbjct: 147 QICPEIESS-TPGDIKSARLPDLRSVIVLDNRQPGMLHFEDVMEAGSSQYVQQLQDLQKT 205
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH-KILLQVPMFHTF 146
++ D INIQFTSGTTG PK A L+H+N++NN+ ++GKR+ + H +I L VP++H F
Sbjct: 206 ISFDDPINIQFTSGTTGAPKGATLSHFNIVNNAYYVGKRVGYTWKPHPRICLPVPLYHCF 265
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G+ G + HG + V P+ + ++ A+ E+C
Sbjct: 266 GSVGGGMCMAVHGISLVFPSAGYDGKANIAALESERC 302
>gi|397736475|ref|ZP_10503157.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927665|gb|EJI94892.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 545
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H FG MG
Sbjct: 188 DPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCFGMVMG 246
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L +HG+T ++P PSF P +L+A+ EKC
Sbjct: 247 NLACTSHGATMIIPGPSFDPKATLQAVEAEKC 278
>gi|404401576|ref|ZP_10993160.1| AMP-binding domain protein [Pseudomonas fuscovaginae UPB0736]
Length = 560
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +++++ A + S L + INIQ+TSGTTG PK A L+HYN++NN
Sbjct: 172 GMLGWAELLERAEAVSAEQLRACSAQLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGY 231
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ L + D ++++ VP++H FG MG L + HGST + P+ +F P+ +L+A+A+E
Sbjct: 232 FVGESLGLTEHD-RLVIPVPLYHCFGMVMGNLGCLTHGSTLIYPSDAFDPLTALQAVAEE 290
Query: 182 K 182
+
Sbjct: 291 R 291
>gi|89902592|ref|YP_525063.1| AMP-binding domain-containing protein [Rhodoferax ferrireducens
T118]
gi|89347329|gb|ABD71532.1| AMP-dependent synthetase and ligase [Rhodoferax ferrireducens T118]
Length = 601
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 41 RPSAYKADALPTKLTRLALRM--------GTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92
+P A +A LP T + L G R S ++ +G R E I+ +L D
Sbjct: 182 QPGALQAARLPHLRTVVWLDEPGQADEAPGLLRFSTLL-ASGDAADPRLETIASTLRASD 240
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN FIG+ ++ D ++ + VP++H FG +G
Sbjct: 241 PINIQFTSGTTGFPKGATLTHRNILNNGFFIGEAMKLTSKD-RLCIPVPLYHCFGMVLGN 299
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + HG+T V P+ F + L+ + EKC
Sbjct: 300 LACLTHGATIVYPSDGFDALAVLQTVQDEKC 330
>gi|119899356|ref|YP_934569.1| AMP-binding protein [Azoarcus sp. BH72]
gi|119671769|emb|CAL95683.1| Long-chain fatty-acid-CoA ligase [Azoarcus sp. BH72]
Length = 562
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P +A LPT + +RMG D++ + + + L + IN
Sbjct: 148 PGLLRAHKLPT--LEMVIRMGAEKTPGMLNFDDLLAPPTRDELTALALLGEKLQFDEAIN 205
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG+PK A L+H+N++NN F+G+ + D ++ + VP++H FG MG L
Sbjct: 206 IQFTSGTTGNPKGATLSHHNILNNGFFVGEAIRLVAGD-RVCIPVPLYHCFGMVMGNLGC 264
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V PA +F+P L+ +A+E+C
Sbjct: 265 LTHGATMVYPAEAFEPQAVLKTLAEERC 292
>gi|226288298|gb|EEH43810.1| short-chain-fatty-acid-CoA ligase [Paracoccidioides brasiliensis
Pb18]
Length = 593
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR++ +S C N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D +
Sbjct: 218 QRRQDTLSPFDVC----NLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTEYD-ILC 272
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V PA +F+P L+A++ E+C
Sbjct: 273 CPPPLFHCFGLVLGLLACITHGAKVVYPAETFEPGAVLKALSDERC 318
>gi|225683229|gb|EEH21513.1| short-chain-fatty-acid-CoA ligase [Paracoccidioides brasiliensis
Pb03]
Length = 593
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR++ +S C N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D +
Sbjct: 218 QRRQDTLSPFDVC----NLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTEYD-ILC 272
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V PA +F+P L+A++ E+C
Sbjct: 273 CPPPLFHCFGLVLGLLACITHGAKVVYPAETFEPGAVLKALSDERC 318
>gi|220929281|ref|YP_002506190.1| AMP-dependent synthetase and ligase [Clostridium cellulolyticum
H10]
gi|219999609|gb|ACL76210.1| AMP-dependent synthetase and ligase [Clostridium cellulolyticum
H10]
Length = 554
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F DI+ IS SL+C D IN+Q+TSGTTG PK LTHYN++NN
Sbjct: 161 GMFSWEDIVDLGNDISDEELYAISNSLDCHDVINMQYTSGTTGFPKGVMLTHYNIVNNGR 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG + D K+ + VP FH FG + I+ + HG T++VP + P+ + AI E
Sbjct: 221 CIGDCMHLTHED-KLCIPVPFFHCFGLVLAIMACVTHG-TSMVPVDYYSPLKVMNAIQTE 278
Query: 182 KC 183
+C
Sbjct: 279 RC 280
>gi|295672253|ref|XP_002796673.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283653|gb|EEH39219.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 593
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++F + D + P+FH FG +G
Sbjct: 221 DVCNLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDFTEYD-ILCCPPPLFHCFGLVLG 279
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V PA +F+P L+A++ E+C
Sbjct: 280 LLACITHGAKVVYPAETFEPGAVLKALSDERC 311
>gi|392406245|ref|YP_006442855.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024178|gb|ADT71659.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4]
gi|390619381|gb|AFM20530.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 543
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RR ++ L+ D INIQ+TSGTTG PK A L+H N++NN F+G+ + + D +I +
Sbjct: 171 RRLLMEAELLSADDPINIQYTSGTTGFPKGATLSHQNILNNGFFVGELCGYSEAD-RICI 229
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAPSF+ +L+AI E+C
Sbjct: 230 PVPFYHCFGMVMGNLAATSHGACMVIPAPSFEARTTLQAIETERC 274
>gi|118353816|ref|XP_001010173.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291940|gb|EAR89928.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 580
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G D++Q G + + ++I + D NIQFTSGTTG PK A LTH+N++NNS
Sbjct: 181 GMINYKDVLQMGGLKDFKTLDRIMNIASPDDATNIQFTSGTTGLPKGATLTHFNILNNSF 240
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG RL + + D I + VP++H FG +G L A+N GST V+P+ F ++ ++ K
Sbjct: 241 FIGNRLGYSEKD-VICVPVPLYHCFGMVLGNLCAINFGSTVVMPSEGFSAKKAMESVTKY 299
Query: 182 KC 183
KC
Sbjct: 300 KC 301
>gi|221214286|ref|ZP_03587258.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
gi|221165941|gb|EED98415.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
Length = 575
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRD 92
+N P +A +P+ T +++ G FR +D++ +G + + +L D
Sbjct: 157 ANAAPGELRAARVPSLRTVVSMGDVAPPGMFRFADVIARGRASVDSAALDALGATLAATD 216
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN+ FI + + F + D + + VP++H FG + +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQD-ALCIPVPLYHCFGMVLAV 275
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|402569814|ref|YP_006619158.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
gi|402251011|gb|AFQ51464.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
Length = 572
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 42 PSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P A LP+ T +++ G FR +D+M +G R + I +L D INI
Sbjct: 158 PGELHAARLPSLRTVVSMGEVVPAGMFRFADVMARGRDTLDVARLDAIGATLAATDPINI 217
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PK A LTH N++NN+ FI + F + D + + VP++H FG + +L +
Sbjct: 218 QFTSGTTGSPKGATLTHRNVVNNARFIAMAMCFTEQD-SLCIPVPLYHCFGMVLAVLACV 276
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+ V P +F P+ +L A+A E+C
Sbjct: 277 STGAAMVFPGEAFDPVATLAAVADERC 303
>gi|421477536|ref|ZP_15925356.1| AMP-binding enzyme [Burkholderia multivorans CF2]
gi|400226391|gb|EJO56469.1| AMP-binding enzyme [Burkholderia multivorans CF2]
Length = 575
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRD 92
+N P +A +P+ T +++ G FR +D++ +G + + +L D
Sbjct: 157 ANAAPGELRAARVPSLRTVVSMGDVAPPGMFRFADVIARGRATVDSAALDALGATLAATD 216
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN+ FI + + F + D + + VP++H FG + +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQD-ALCIPVPLYHCFGMVLAV 275
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|398878775|ref|ZP_10633883.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
gi|398198250|gb|EJM85209.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
Length = 565
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+LSD+ G E R R SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLSDLAAGVSSEQLRER---GDSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAND-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLTTVAEEK 297
>gi|399009260|ref|ZP_10711701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
gi|398113155|gb|EJM03005.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
Length = 564
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ G E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLGAGVSVEALRERQ---DSLDPDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P +F P+ +L A+A+EK
Sbjct: 241 ESLGLGHED-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPNDAFDPLQTLGAVAEEK 297
>gi|398885459|ref|ZP_10640370.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
gi|398192488|gb|EJM79640.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
Length = 565
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+LSD+ G E R R SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLSDLAAGVSSEQLRER---GDSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAND-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLTTVAEEK 297
>gi|378726845|gb|EHY53304.1| long-chain fatty-acid-CoA ligase [Exophiala dermatitidis
NIH/UT8656]
Length = 575
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+Q S+ + D N+QFTSGTTG+PKAA LTHY+L+NNS FIG R+ + D + P
Sbjct: 191 DQFSQQFSAHDVCNLQFTSGTTGNPKAAMLTHYSLVNNSRFIGDRMALTEED-VLCCPPP 249
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G+L + HG V P+ +F L+A+++E+C
Sbjct: 250 LFHCFGLVLGLLAIITHGGKVVYPSETFDAAACLKAVSEEQC 291
>gi|374599197|ref|ZP_09672199.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423324341|ref|ZP_17302182.1| hypothetical protein HMPREF9716_01539 [Myroides odoratimimus CIP
103059]
gi|373910667|gb|EHQ42516.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404608433|gb|EKB07897.1| hypothetical protein HMPREF9716_01539 [Myroides odoratimimus CIP
103059]
Length = 537
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I S+ + +NIQ+TSGTTG PK LTH+N++NN FIG RL++ D ++ + VP
Sbjct: 173 EIEASVQFGEAVNIQYTSGTTGFPKGVTLTHHNILNNGYFIGIRLKYTAAD-RVCIPVPF 231
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L +HG+T V+P SF P +L + +EKC
Sbjct: 232 YHCFGMVIGNLCCTSHGATIVIPNDSFDPAKTLEVVEREKC 272
>gi|398807231|ref|ZP_10566112.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398089728|gb|EJL80233.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 557
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ +G R Q+ K+L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 167 GMQRFSQLL-ASGDAADPRVGQVQKTLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 225
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HGS V P F P+ L + E
Sbjct: 226 FIGECMKLSPVD-RLCIPVPLYHCFGMVLGNLACLTHGSAIVYPNDGFDPLAVLETVQAE 284
Query: 182 KC 183
KC
Sbjct: 285 KC 286
>gi|340728305|ref|XP_003402466.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Bombus terrestris]
Length = 617
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
++C DG NIQFTSGTTG PKA ++H +++NNS + E DHK+ L VP FH FG
Sbjct: 239 ISCHDGSNIQFTSGTTGRPKATLISHRSVMNNSKQAAVKAEL-TVDHKVCLNVPFFHVFG 297
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G++ ++ G T V+PA SF P+ SL AI +EKC
Sbjct: 298 IIKGLMCMLHAGITLVLPARSFNPVKSLEAIVREKC 333
>gi|333377146|ref|ZP_08468882.1| hypothetical protein HMPREF9456_00477 [Dysgonomonas mossii DSM
22836]
gi|332886359|gb|EGK06603.1| hypothetical protein HMPREF9456_00477 [Dysgonomonas mossii DSM
22836]
Length = 550
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+++NC D +N+Q+TSGTTG PK LTHYN++NN F G+ ++F D K+ + VP+FH
Sbjct: 184 RTVNCHDVVNMQYTSGTTGFPKGVMLTHYNIVNNGFFTGEAMQF-TADDKLCVCVPLFHC 242
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + +N + HGST V+ F P+ L +I KE+C
Sbjct: 243 FGIVLATMNCLTHGSTQVM-VERFDPLVVLASIHKERC 279
>gi|154292445|ref|XP_001546797.1| hypothetical protein BC1G_14541 [Botryotinia fuckeliana B05.10]
Length = 464
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E++ + D +N+QFTSG+TG PKAA LTH+NL+NN+N IG RL F D + P
Sbjct: 194 ERVKSMVKPDDIVNLQFTSGSTGSPKAAMLTHFNLVNNANSIGDRLAFTPQD-ILCCPPP 252
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G+L + HG+ ++PA +F LRA++ EKC
Sbjct: 253 LFHCFGLVLGVLAVITHGAKIILPAETFDASAVLRAVSDEKC 294
>gi|161523288|ref|YP_001578300.1| AMP-binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189351939|ref|YP_001947567.1| AMP-binding domain protein [Burkholderia multivorans ATCC 17616]
gi|160340717|gb|ABX13803.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189335961|dbj|BAG45031.1| long-chain fatty-acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 575
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRD 92
+N P +A +P+ T +++ G FR +D++ +G + + +L D
Sbjct: 157 ANAAPGELRAARVPSLRTVVSMGDVAPPGMFRFADVIARGRATVDSAALDALGATLAATD 216
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN+ FI + + F + D + + VP++H FG + +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIARAMRFSEQD-ALCIPVPLYHCFGMVLAV 275
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|391326696|ref|XP_003737848.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Metaseiulus occidentalis]
Length = 544
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 75/122 (61%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
T +++ A E H++ ++I S++ +N+QFTSGTTG KA LT++ L+NN+
Sbjct: 196 ATISYQEVISNATKELHQKADEIHDSVDPDSVVNVQFTSGTTGKQKAVALTNHGLVNNAY 255
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G R+ + K+L+ +P+ HTFG G+L+++ HG++ V+PA F S+ A+AK
Sbjct: 256 SFGNRVGLHAPNSKVLINLPLVHTFGCVCGVLSSVIHGASAVLPAARFNAQRSVEALAKY 315
Query: 182 KC 183
KC
Sbjct: 316 KC 317
>gi|259489124|tpe|CBF89137.1| TPA: acyl CoA synthetase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 593
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 37 ESNPRPSAYKADALPTKLTRLALRMGTFR----LSDIMQGAGPEYHRRREQISKSLNCRD 92
E P P KA L + + GT++ + +++ P + L D
Sbjct: 164 ELGPHP---KASGTSKALEEIVVIRGTYKDFTTYAQVIERGLPLPPNTLPERESQLQTED 220
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
N+QFTSG+TG+PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G+
Sbjct: 221 VCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMNLTSFD-ILCCPPPLFHCFGLVLGM 279
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + HGS + P+ +F P+ +L AI+ EKC
Sbjct: 280 LAVVTHGSKIIFPSETFDPLATLHAISDEKC 310
>gi|118353005|ref|XP_001009773.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291540|gb|EAR89528.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 589
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + AG + +++ + D NIQFTSGTTG+PK A LTH+N++NN
Sbjct: 190 GMMSFKSLYELAGSKDYQKLHTTMRITEPDDATNIQFTSGTTGNPKGATLTHFNILNNGY 249
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+G+RL ++D KI L VP++H FG MG L A+N+GST V+P+ F P S++++ +
Sbjct: 250 LLGQRLGLVQSD-KICLSVPLYHCFGMVMGNLAALNYGSTIVLPSEGFNPQHSMQSVGE 307
>gi|453364097|dbj|GAC80184.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 548
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++I+ L+ D INIQ+TSGTTG PK L+H N+ NN +G+ + + + D +I L VP
Sbjct: 179 DEIASRLDADDAINIQYTSGTTGSPKGVTLSHTNIGNNGFLVGELVNYTEAD-RICLPVP 237
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A++HGS V+P P+F P +L A+ K C
Sbjct: 238 FYHCFGMVMGNLAAISHGSAMVIPGPAFDPATALAAVEKYGC 279
>gi|221069244|ref|ZP_03545349.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220714267|gb|EED69635.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 587
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S +M G R + I+ +L+ D INIQFTSGTTG PK A LTH N++NN
Sbjct: 197 GMLRFSQLM-AQGTSADERIDAIAATLSNLDPINIQFTSGTTGFPKGATLTHRNILNNGF 255
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGST V P F P+ L A+ E
Sbjct: 256 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSTIVYPNDGFDPITVLEAVQAE 314
Query: 182 KC 183
KC
Sbjct: 315 KC 316
>gi|374985715|ref|YP_004961210.1| AMP-binding protein [Streptomyces bingchenggensis BCW-1]
gi|297156367|gb|ADI06079.1| AMP-binding domain protein [Streptomyces bingchenggensis BCW-1]
Length = 575
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 65 RLSDIMQGAGPEYHRRRE-QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI 123
R D + AG R R + L C D +NIQ+TSGTTG PK A L+H+N++NN +
Sbjct: 172 RTWDGLLHAGANVSRERLIEREARLTCDDPVNIQYTSGTTGFPKGATLSHHNILNNGYSV 231
Query: 124 GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G+ L + + D ++ L VP H FG G L A +HG+ V+PAP+F P +LRA+ +E+C
Sbjct: 232 GETLGYTQQD-RVCLPVPFSHCFGMVTGNLGATSHGACIVIPAPTFDPAATLRAVEQERC 290
>gi|377559730|ref|ZP_09789269.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377523126|dbj|GAB34434.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 562
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ +L D INIQ+TSGTTG PK A LTH N+ NN +G+ L + D +I + VP +H
Sbjct: 180 AATLEPHDPINIQYTSGTTGFPKGATLTHSNISNNGYLVGELLAYTDAD-RIAIPVPFYH 238
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ V+P+P+F P +LRA+A+ +C
Sbjct: 239 CFGMVMGNLAATSHGAAMVIPSPTFDPEAALRAVAEYRC 277
>gi|379059581|ref|ZP_09850107.1| AMP-binding domain protein [Serinicoccus profundi MCCC 1A05965]
Length = 543
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G +++ GA R ++ SL INIQ+TSGTTG PK A L+H N++NN
Sbjct: 153 IGDEGWDELLAGAHQVSRGRLAELQASLTPDQPINIQYTSGTTGFPKGATLSHRNILNNG 212
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
F+G+ + + D I + VP +H FG MG L A HG+ V+P P F P +LRA+ +
Sbjct: 213 YFVGEGCRYTERD-VICIPVPFYHCFGMVMGNLAATTHGACMVIPGPGFDPAATLRAVRE 271
Query: 181 EKC 183
E+C
Sbjct: 272 EQC 274
>gi|242805924|ref|XP_002484634.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715259|gb|EED14681.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 598
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++ +D + P+FH FG +G
Sbjct: 222 DVCNLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDLTSSD-VLCCPPPLFHCFGLVLG 280
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P +F+P L AI+KE+C
Sbjct: 281 LLACVTHGAKVVYPGETFEPAAVLDAISKEQC 312
>gi|91772692|ref|YP_565384.1| AMP-binding domain protein [Methanococcoides burtonii DSM 6242]
gi|91711707|gb|ABE51634.1| fatty-acid--CoA ligase [Methanococcoides burtonii DSM 6242]
Length = 547
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ + +L+C+D IN+Q+TSGTTG PK LTH N++NN +IG+R +F + D ++ L VP
Sbjct: 182 DSLKGTLDCKDVINMQYTSGTTGFPKGVMLTHENILNNGYYIGERQKFTE-DDRLCLPVP 240
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G+L + HG T V+ F P+ L A+ KEKC
Sbjct: 241 LFHCFGIVLGVLATLTHGGTLVM-IELFDPLLVLAAVQKEKC 281
>gi|359397207|ref|ZP_09190257.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
gi|357969001|gb|EHJ91450.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
Length = 579
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R SD+M+ A + + +L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 177 GMWRWSDLMEEASKVSQTDVDDLQATLQFDDAINIQYTSGTTGFPKGATLSHHNILNNGF 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L + HG+T + P F P L+A+ +
Sbjct: 237 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCITHGATMIYPDEGFDPGKVLKAVHDQ 295
Query: 182 K 182
K
Sbjct: 296 K 296
>gi|361126158|gb|EHK98172.1| putative acyl-CoA synthetase YngI [Glarea lozoyensis 74030]
Length = 506
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+Q+TSG+TGHPKAA LTH+NLINN+ IG RL+F + D + P+FH FG +G
Sbjct: 184 DTCNLQYTSGSTGHPKAAMLTHFNLINNATSIGDRLDFTEED-ILCCPPPLFHCFGLVLG 242
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V+PA +F L+AI++E C
Sbjct: 243 VLAVLTHGAKIVLPAETFDATAVLKAISEENC 274
>gi|344344713|ref|ZP_08775573.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343803647|gb|EGV21553.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 562
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT S ++ PE R ++ +++ D +NIQF++ T G P A LTH+N++NN
Sbjct: 174 GTVAFSTLLVEPAPETLERVRALAAAVDPDDPVNIQFSNATGGPPAGATLTHHNIVNNGL 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G++L D ++ + VP++H FG MG + + HGS V P P F P+ +L A+A E
Sbjct: 234 MVGRQLGLGAAD-RVCIPVPLYHCFGMVMGNMACLLHGSAMVYPGPGFDPLATLEAVAAE 292
Query: 182 KC 183
C
Sbjct: 293 SC 294
>gi|351732883|ref|ZP_08950574.1| AMP-binding domain protein [Acidovorax radicis N35]
Length = 577
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ G R QI+ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 187 GLLRFSDLL-ARGDAQDARLAQIAATLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 245
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L HG+T V P F P+ L+ + E
Sbjct: 246 FIGECMKLTPED-RLCIPVPLYHCFGMVLGNLACFTHGATIVYPNDGFDPLTVLQTVQDE 304
Query: 182 KC 183
+C
Sbjct: 305 RC 306
>gi|441160730|ref|ZP_20967802.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616867|gb|ELQ79989.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 584
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
+ R +K L+ D +NIQ+TSGTTG PK A L+H+N++NN ++G+ + + + D ++
Sbjct: 189 YERLAACAKELSPHDPVNIQYTSGTTGFPKGATLSHHNILNNGFWVGETVGYTEHD-RVC 247
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L VP +H FG MG L A +HG+ V+PAP+F +LRA+ +E+C
Sbjct: 248 LPVPFYHCFGMVMGNLGATSHGACIVIPAPAFDAAATLRAVEQERC 293
>gi|148652394|ref|YP_001279487.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571478|gb|ABQ93537.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 587
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
P+ R+ Q LN D INIQFTSGTTG PK A LTH NL+NN+ +G+ L D
Sbjct: 218 PKLTERQNQ----LNANDAINIQFTSGTTGTPKGATLTHRNLLNNAYHLGETLCLTAED- 272
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
K+ L +P++H F +G L ++HG+T V P+ SF P+ L+AI +EKC
Sbjct: 273 KLCLPLPLYHCFAMVLGNLTMLSHGATLVYPSSSFDPLSVLQAINEEKC 321
>gi|395646175|ref|ZP_10434035.1| AMP-dependent synthetase and ligase [Methanofollis liminatans DSM
4140]
gi|395442915|gb|EJG07672.1| AMP-dependent synthetase and ligase [Methanofollis liminatans DSM
4140]
Length = 566
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Query: 62 GTFRLSDIMQ-GAG--PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN 118
G F ++++ GAG P+ R RE SLN D INIQ+TSGTTG+PK LTH+ ++N
Sbjct: 172 GMFTWDEMIEKGAGISPDELRERE---ASLNFDDAINIQYTSGTTGYPKGVVLTHHGVMN 228
Query: 119 NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
N FIG+ + F + D ++ + VP +H FG + + ++ HG+T V+P+P F L+A+
Sbjct: 229 NGYFIGEGMGFTEKD-RLCIPVPFYHCFGMVLSNMASVTHGTTMVIPSPVFDAEAVLQAL 287
Query: 179 AKEKC 183
E+C
Sbjct: 288 QNERC 292
>gi|326383718|ref|ZP_08205403.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197482|gb|EGD54671.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 558
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
+ +++ E + +I+ L D INIQ+TSGTTG PK LTH N+ NN +G
Sbjct: 161 FTQMLEAPSDEEMAQVAEIAAGLRADDPINIQYTSGTTGSPKGVTLTHLNIGNNGYLVGA 220
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
LE+ + D +I L VP +H FG MG L A+ GS V+P P+F P +L A+ K +C
Sbjct: 221 LLEYTEAD-RICLPVPFYHCFGMVMGNLAAIAFGSAMVIPGPAFDPKTALAAVEKYRC 277
>gi|9957179|gb|AAG09247.1|AF176639_1 long chain fatty acid-CoA ligase [Pseudomonas stutzeri]
Length = 567
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RRR+ L D INIQ+TSGTTG PK A L+HYN++NN +G+ L + D ++++
Sbjct: 196 RRRQ---AQLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLSEHD-RLVI 251
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
VP++H FG MG L + HGST + P +F P+ +L+A+A+E+
Sbjct: 252 PVPLYHCFGMVMGNLGCLTHGSTMIYPGDAFDPLSTLQAVAEER 295
>gi|420256453|ref|ZP_14759297.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
gi|398043174|gb|EJL36103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
Length = 576
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGI 94
P A +A LP R+ +RM G SD+++ + R + I +L+ D I
Sbjct: 162 PGALRAARLPD--LRIVIRMCDTETPGMLTFSDVIERGRTAFDPARLDAIGATLDANDPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEQD-SLCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P +L+A+A+E+C
Sbjct: 279 CVSVGAAMVFPGEAFDPGATLKAVAEERC 307
>gi|319795986|ref|YP_004157626.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315598449|gb|ADU39515.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 560
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ +G R + K+L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 170 GMQRFSQLL-ASGDASDPRVAAVQKTLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 228
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D K+ + VP++H FG +G L + HGS V P F P+ L + E
Sbjct: 229 FIGECMKLSSID-KLCIPVPLYHCFGMVLGNLACLTHGSAIVYPNDGFDPLTVLETVQAE 287
Query: 182 KC 183
KC
Sbjct: 288 KC 289
>gi|441519811|ref|ZP_21001483.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441460564|dbj|GAC59444.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 550
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I+ LN D INIQ+TSGTTG PK LTH N+ NN +G LE+ + D +I L VP
Sbjct: 178 EIAAGLNPDDPINIQYTSGTTGAPKGVTLTHLNIGNNGYLVGSLLEYTQHD-RICLPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A+ G V+PAP+F P +L A+ K +C
Sbjct: 237 YHCFGMVMGNLAAIAFGCAMVIPAPAFDPKATLAAVEKYRC 277
>gi|294650406|ref|ZP_06727769.1| long-chain-fatty-acid--CoA ligase, partial [Acinetobacter
haemolyticus ATCC 19194]
gi|292823718|gb|EFF82558.1| long-chain-fatty-acid--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
Length = 559
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQFTSGTTG+PK LTH+N++NN F+G+ + D K+ + VP+FH FG MG L
Sbjct: 201 INIQFTSGTTGNPKGTMLTHHNILNNGYFVGEGIRLTPQD-KVCISVPLFHCFGMVMGNL 259
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGST V P+ F P+++L+ I E+C
Sbjct: 260 ACITHGSTMVYPSAVFNPLETLKTIHNERC 289
>gi|226953998|ref|ZP_03824462.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
sp. ATCC 27244]
gi|226835249|gb|EEH67632.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
sp. ATCC 27244]
Length = 564
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQFTSGTTG+PK LTH+N++NN F+G+ + D K+ + VP+FH FG MG L
Sbjct: 206 INIQFTSGTTGNPKGTMLTHHNILNNGYFVGEGIRLTPQD-KVCISVPLFHCFGMVMGNL 264
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGST V P+ F P+++L+ I E+C
Sbjct: 265 ACITHGSTMVYPSAVFNPLETLKTIHNERC 294
>gi|296389017|ref|ZP_06878492.1| AMP-binding domain protein [Pseudomonas aeruginosa PAb1]
Length = 513
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|429215399|ref|ZP_19206561.1| AMP-binding protein [Pseudomonas sp. M1]
gi|428154626|gb|EKX01177.1| AMP-binding protein [Pseudomonas sp. M1]
Length = 556
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+HYN++NN +G+ + + D ++++ VP++H FG MG L
Sbjct: 204 INIQYTSGTTGFPKGATLSHYNILNNGYMVGESIGLTEHD-RLVIPVPLYHCFGMVMGNL 262
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M HG+T + PAPSF+P +L A+A+E+
Sbjct: 263 GCMTHGATMIYPAPSFEPEATLAAVAEER 291
>gi|389681151|ref|ZP_10172496.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
gi|388554687|gb|EIM17935.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
Length = 564
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ G E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLGAGVSVEALRERQ---DSLDPDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P +F P+ +L A+A+EK
Sbjct: 241 ESLGLGHED-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPNDAFDPLLTLSAVAEEK 297
>gi|355642303|ref|ZP_09052704.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
gi|354830374|gb|EHF14420.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
Length = 564
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|453382972|dbj|GAC82634.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 551
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +++ SL+ D +NIQ+TSGTTG PK A L+H N+ NN +G+ L + D +I +
Sbjct: 177 RVAEVAASLSPDDAVNIQYTSGTTGFPKGATLSHRNIGNNGYLVGELLGY-TADDRICIP 235
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+P P+F P +L A+ K +C
Sbjct: 236 VPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPRAALDAVEKYRC 279
>gi|377565797|ref|ZP_09795077.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377527010|dbj|GAB40242.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 547
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
Q + +L D INIQ+TSGTTG PK A LTH N+ NN +G+ L + D +I + VP
Sbjct: 178 QRAATLRSDDPINIQYTSGTTGFPKGATLTHANISNNGYLVGELLAYTDAD-RICIPVPF 236
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A +HG+ V+P+P+F P +LRA+ +C
Sbjct: 237 YHCFGMVMGNLAATSHGAAMVIPSPTFDPEAALRAVVDYRC 277
>gi|403718190|ref|ZP_10943189.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208635|dbj|GAB97872.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 552
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ +D INIQ+TSGTTG PK A L+H N++NN F+G+ + D +I + VP +H FG
Sbjct: 183 LDAQDPINIQYTSGTTGFPKGATLSHRNILNNGYFVGELCGYTHED-RICIPVPFYHCFG 241
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
MG L A +HG+ ++PAPSF+P ++RA+ E+
Sbjct: 242 MVMGNLAATSHGACMIIPAPSFEPAATMRAVQDER 276
>gi|398812778|ref|ZP_10571492.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398076492|gb|EJL67552.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 564
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ P + E + L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 174 GFLRFSDLLVMGDPA-DQAVEIVGARLRNTDPINIQFTSGTTGSPKGATLTHRNVLNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L A+ HG+T V P +F+P+ L+++ E
Sbjct: 233 FIGEAMRLSPED-RLCIPVPLYHCFGMVVGNLAALTHGTTIVYPNDAFEPVSVLQSVQDE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|313107462|ref|ZP_07793649.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|386066494|ref|YP_005981798.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880151|gb|EFQ38745.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|348035053|dbj|BAK90413.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 564
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|386058544|ref|YP_005975066.1| AMP-binding protein [Pseudomonas aeruginosa M18]
gi|347304850|gb|AEO74964.1| AMP-binding domain protein [Pseudomonas aeruginosa M18]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|424941819|ref|ZP_18357582.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|346058265|dbj|GAA18148.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|416858764|ref|ZP_11913524.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|334839139|gb|EGM17834.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|453044975|gb|EME92696.1| AMP-binding domain protein [Pseudomonas aeruginosa PA21_ST175]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|418049143|ref|ZP_12687230.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
gi|353190048|gb|EHB55558.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
Length = 1045
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 66 LSDIMQGAGPEYH---RRREQIS--------KSLNCRDGINIQFTSGTTGHPKAAFLTHY 114
LSD++ P++H +R EQ S +SL D INIQ+TSGTTG PK A L+H
Sbjct: 650 LSDVVFLNSPDWHALRQRSEQTSADDLRRRMESLTPSDPINIQYTSGTTGSPKGAVLSHR 709
Query: 115 NLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDS 174
N++NN F+ + F D ++ + VP +H FG MG L HG+T V+PA F P +
Sbjct: 710 NILNNGFFVTDLINFGPGD-RLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAAGFDPGAT 768
Query: 175 LRAIAKEKC 183
L A+ +E+C
Sbjct: 769 LAAVEQERC 777
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 42 PSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSG 101
PS A+++ T LT GT L + GAG E + ++ D I +TSG
Sbjct: 118 PSVGSAESVHTTLTI----GGT--LESAIDGAGAE------PVDVPVSDNDPAFIMYTSG 165
Query: 102 TTGHPKAAFLTHYNL----INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
TTG PK A L+H NL ++ +G R + D L P+FHT G + G+L A
Sbjct: 166 TTGFPKGAVLSHRNLYLHAFSSIGTLGHRAD----DDCWLGVAPLFHTAGVS-GMLPAFL 220
Query: 158 HGSTTVVPAP-SFKPMDSLRAIAKEK 182
G V+P+ F ++R I E+
Sbjct: 221 TGGKVVIPSSGGFDAEAAVRTIVAER 246
>gi|421167427|ref|ZP_15625616.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
gi|404534460|gb|EKA44194.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|431890784|gb|ELK01663.1| Acyl-CoA synthetase family member 2, mitochondrial, partial
[Pteropus alecto]
Length = 432
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINI 96
+P A K+ LP T +++ GT L +++ E H + L+C D +NI
Sbjct: 167 QPGALKSQRLPDLTTVISVDTPLPGTLLLDEVVATGSKEQHLAHLHHTQQFLSCYDPVNI 226
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHK--ILLQVPMFHTFGTAMGIL 153
QFTSGTTG K A L+H+N++NNS F+GKRL+ D KT K ++L P++H G+ G +
Sbjct: 227 QFTSGTTGKVKGATLSHHNIVNNSYFLGKRLKMDLKTPEKSRLVLPSPLYHCLGSVAGTM 286
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++ HG+T +V +P+F +L I++E+
Sbjct: 287 MSVMHGATLIVSSPTFDGKKALETISRER 315
>gi|241661951|ref|YP_002980311.1| AMP-binding domain-containing protein [Ralstonia pickettii 12D]
gi|240863978|gb|ACS61639.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 571
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
++ +P A A LP R +RMG +D++ + I+ +L+
Sbjct: 154 ASAQPGALNAAKLPA--LRWVIRMGEANTPGMLNFADVVARGKSVPVDALDAITATLSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + + D ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185
+L G+ V P +F P+ +LR +A+E+C +
Sbjct: 271 VLTCTATGACMVFPGEAFDPLATLRTVAEERCTQ 304
>gi|15597753|ref|NP_251247.1| AMP-binding protein [Pseudomonas aeruginosa PAO1]
gi|218891464|ref|YP_002440331.1| AMP-binding protein [Pseudomonas aeruginosa LESB58]
gi|418585097|ref|ZP_13149152.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590678|ref|ZP_13154586.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420139736|ref|ZP_14647555.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|421160319|ref|ZP_15619389.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
gi|421517066|ref|ZP_15963740.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|9948616|gb|AAG05945.1|AE004683_9 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|218771690|emb|CAW27464.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|375044826|gb|EHS37418.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050635|gb|EHS43115.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403247484|gb|EJY61121.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|404346548|gb|EJZ72897.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|404544803|gb|EKA53935.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|254240989|ref|ZP_04934311.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451984300|ref|ZP_21932557.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
gi|126194367|gb|EAZ58430.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451758229|emb|CCQ85080.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|107102005|ref|ZP_01365923.1| hypothetical protein PaerPA_01003052 [Pseudomonas aeruginosa PACS2]
gi|116050501|ref|YP_790680.1| AMP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|421174299|ref|ZP_15632030.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
gi|115585722|gb|ABJ11737.1| putative acyl-CoA synthetases (AMP-forming) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404534503|gb|EKA44236.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|374628530|ref|ZP_09700915.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
gi|373906643|gb|EHQ34747.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
Length = 566
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ D INIQ+TSGTTG+PK LTH+N++NN IG ++F + D ++ + VP +H F
Sbjct: 197 SLSFDDPINIQYTSGTTGYPKGVVLTHHNVLNNGYTIGNGMKFTEKD-RLCIPVPFYHCF 255
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + L + HG+T V+P+P+F P LR I KEKC
Sbjct: 256 GMVLSNLACVTHGTTMVIPSPAFDPEAVLRTIDKEKC 292
>gi|348509256|ref|XP_003442166.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 609
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + D+MQ +H+ + L+ D INIQFTSGTTG+PK A L+H+N++NN+
Sbjct: 223 GMLHVDDVMQAGESRHHKELMDLQSKLSFDDPINIQFTSGTTGNPKGAVLSHHNIVNNAY 282
Query: 122 FIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
F+G R+ + + ++ + VP +H FG+ +G ++ HG T V P+ ++ +L AI
Sbjct: 283 FMGLRVGYGWRPRVRVCVPVPFYHCFGSVLGGMSMAVHGITLVFPSAAYNSFANLEAIQS 342
Query: 181 EKC 183
EKC
Sbjct: 343 EKC 345
>gi|421154052|ref|ZP_15613578.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
gi|404522671|gb|EKA33148.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|115350155|ref|YP_771994.1| AMP-binding domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280143|gb|ABI85660.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 575
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 42 PSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P +A +P+ T +++ G FR +D+M +G R + I +L D INI
Sbjct: 161 PGDLRAARVPSLRTVVSMGDVAPAGMFRFADVMARGRDTLDVARLDAIGATLAATDPINI 220
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PK A L H N++NN+ FI + F + D + + VP++H FG + +L +
Sbjct: 221 QFTSGTTGSPKGATLAHRNVVNNARFIAMAMRFSEQD-ALCIPVPLYHCFGMVLAVLACV 279
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+ V P +F P+ +L A+A E+C
Sbjct: 280 STGAAMVFPGEAFDPVATLAAVADERC 306
>gi|421180309|ref|ZP_15637876.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
gi|404545989|gb|EKA55058.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|359420410|ref|ZP_09212348.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358243767|dbj|GAB10417.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 547
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 40 PRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
P A AD+LP + + G+ + ++ + + L+ D INIQFT
Sbjct: 140 PTMVARAADSLPEPVPLVVF--GSQEWAALLADPSDAEVAAVAEAAAGLDPDDPINIQFT 197
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A LTH N++NN +G+ L + D +I + VP +H FG MG L A HG
Sbjct: 198 SGTTGAPKGATLTHRNILNNGYLVGELLGYTDAD-RICIPVPFYHCFGMVMGNLAATTHG 256
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
+ V+PAP+F P +L A+A+ C
Sbjct: 257 AAMVIPAPAFDPAATLTAVAEFGC 280
>gi|171315822|ref|ZP_02905053.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099011|gb|EDT43796.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 575
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 42 PSAYKADALPTKLTRLALR----MGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P +A +P+ T +++ G FR +D+M +G + I +L D INI
Sbjct: 161 PGDLRAARVPSLRTVVSMSEVAPAGMFRFTDVMARGRDTLDVAQLNAIGATLAATDPINI 220
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PK A LTH N++NN+ FI + F + D + + VP++H FG + +L +
Sbjct: 221 QFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFSEQD-ALCIPVPLYHCFGMVLAVLACV 279
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+ V P +F P+ +L A+A E+C
Sbjct: 280 SKGAAMVFPGEAFDPVATLAAVADERC 306
>gi|94309555|ref|YP_582765.1| AMP-binding domain protein [Cupriavidus metallidurans CH34]
gi|93353407|gb|ABF07496.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
metallidurans CH34]
Length = 570
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A A LP L R +RM G +++ ++I+ L+ RD IN
Sbjct: 158 PGALNAARLP--LLRWVIRMEDVPTPGMLTFRELLARGANVPKTELDEITAGLDARDPIN 215
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN I + F + D K+ + VP +H FG +G+L
Sbjct: 216 IQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQD-KLCIPVPFYHCFGMVLGVLAC 274
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G++ V P +F P ++ A+++E+C
Sbjct: 275 VSTGASMVFPGEAFHPGATMAAVSEERC 302
>gi|398938415|ref|ZP_10667818.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398165963|gb|EJM54073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 82 EQISK---SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
EQ+S+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L +D ++++
Sbjct: 195 EQLSERQHSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTASD-RLVI 253
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
VP++H FG MG L M HGST + P +F P+ +L A+A+EK
Sbjct: 254 PVPLYHCFGMVMGNLGCMTHGSTMIYPNDAFDPLLTLTAVAEEK 297
>gi|254235546|ref|ZP_04928869.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
gi|126167477|gb|EAZ52988.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|224825723|ref|ZP_03698827.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601947|gb|EEG08126.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 562
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A +A LPT + +RMG + ++ + +L D IN
Sbjct: 148 PGALRAARLPT--LEMVIRMGDEASPGMLNFNQLLAEPTEAERAMLAETGTTLQFDDPIN 205
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A L+H+N++NN F+G+ ++ D ++ + VP++H FG +G L
Sbjct: 206 IQFTSGTTGSPKGATLSHHNILNNGFFVGEAMKLVPGD-RLCIPVPLYHCFGMVLGNLAC 264
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T + P+ +F+P+ L+ +A+EKC
Sbjct: 265 LTHGTTMIFPSEAFEPLAVLQTVAEEKC 292
>gi|167033483|ref|YP_001668714.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859971|gb|ABY98378.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 557
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
Q L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP+
Sbjct: 193 QRQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPL 251
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+H FG M L M HGST + P +F P+ +LRA+A+EK
Sbjct: 252 YHCFGMVMANLGCMTHGSTLIYPNDAFDPLATLRAVAEEK 291
>gi|358371395|dbj|GAA88003.1| long-chain-fatty-acid-CoA ligase [Aspergillus kawachii IFO 4308]
Length = 584
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 37/181 (20%)
Query: 39 NPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPE---------------------- 76
PR Y D ++ + R+G L D++ GP+
Sbjct: 124 TPRELYYALDHTDCRVVFMTPRIGRHTLEDVLAELGPQPKQNGKSAALEEIVILRGEYQN 183
Query: 77 ---YH---RRREQISKS--------LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNF 122
YH +R E++ S L D N+QFTSG+TG+PKAA LTH+NL+NNS F
Sbjct: 184 FSTYHDVIQRGERLPNSALPDREAELRPDDVCNLQFTSGSTGNPKAAMLTHHNLVNNSRF 243
Query: 123 IGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
IG R++ D + P+FH FG +G+L + HGS V P+ +F P L AI+ EK
Sbjct: 244 IGDRMDLTSFD-ILCCPPPLFHCFGLVLGMLAVVTHGSKIVFPSETFDPKAVLHAISDEK 302
Query: 183 C 183
C
Sbjct: 303 C 303
>gi|416872613|ref|ZP_11916817.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|416872754|ref|ZP_11916934.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845741|gb|EGM24301.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845851|gb|EGM24410.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
Length = 564
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|404442480|ref|ZP_11007659.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
gi|403657052|gb|EJZ11842.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
Length = 545
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
S L+ RD +NIQ+TSGTTG PK A L+H N++NN F+ +++ D ++ + VP +H
Sbjct: 175 SAGLSNRDPVNIQYTSGTTGFPKGATLSHRNILNNGFFVTEQIRLRPGD-RLCIPVPFYH 233
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L HG+T V+P PSF P +L+AI E+C
Sbjct: 234 CFGMVMGNLGCTTHGATMVIPGPSFDPAQTLQAIESERC 272
>gi|407940801|ref|YP_006856442.1| AMP-binding protein [Acidovorax sp. KKS102]
gi|407898595|gb|AFU47804.1| AMP-binding domain protein [Acidovorax sp. KKS102]
Length = 576
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ G R I+ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 186 GLLRFSDLL-ARGNAADPRLAHIAATLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 244
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HG+T V P F P+ L+ + E
Sbjct: 245 FIGECMKLTPED-RLCIPVPLYHCFGMVLGNLACLTHGATIVYPNDGFDPITVLQTVQDE 303
Query: 182 KC 183
+C
Sbjct: 304 RC 305
>gi|373109327|ref|ZP_09523606.1| hypothetical protein HMPREF9712_01199 [Myroides odoratimimus CCUG
10230]
gi|371645325|gb|EHO10851.1| hypothetical protein HMPREF9712_01199 [Myroides odoratimimus CCUG
10230]
Length = 537
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I S+ + +NIQ+TSGTTG PK LTH+N++NN FIGKRL++ D ++ + VP +
Sbjct: 174 IEDSVQFGEAVNIQYTSGTTGFPKGVTLTHHNILNNGYFIGKRLKYTTAD-RVCIPVPFY 232
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L +HG+T V+P F P +L+ + EKC
Sbjct: 233 HCFGMVIGNLCCTSHGATIVIPNDGFDPAKTLQVVQDEKC 272
>gi|56478075|ref|YP_159664.1| AMP-binding protein [Aromatoleum aromaticum EbN1]
gi|56314118|emb|CAI08763.1| putative long chain fatty-acid CoA ligase [Aromatoleum aromaticum
EbN1]
Length = 562
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+ L D INIQFTSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP++H
Sbjct: 195 GEKLQFDDPINIQFTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGD-RVCIPVPLYH 253
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L + HG+T V PA +F+P+ L +A+E+C
Sbjct: 254 CFGMVMGNLGCVTHGATMVYPAEAFEPVAVLETLAEERC 292
>gi|389784070|ref|ZP_10195267.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
gi|388433827|gb|EIL90786.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
Length = 558
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+LN D +NIQFTSGTTG PK A LTH+N++NN FIG+ + + D ++ + VP +H F
Sbjct: 199 TLNFDDAVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEQD-RLCIPVPFYHCF 257
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L + HG+ V+P F + +L+ +A+E+C
Sbjct: 258 GMVLGNLACVTHGACMVIPGEGFDALTTLQCVAEERC 294
>gi|377574787|ref|ZP_09803802.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
gi|377536492|dbj|GAB48967.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
Length = 543
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 58 ALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
A +G +++ G + + S SL+ D INIQ+TSGTTG PK A L+H N++
Sbjct: 151 AFYIGDASWDELLAGGESISDEQLHERSDSLDPHDPINIQYTSGTTGFPKGATLSHRNIL 210
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN F+G+ L + + D + + +P +H FG MG L +HG+ V+P P+F P+ +L A
Sbjct: 211 NNGFFVGEGLTYTEKD-IVCIPMPFYHCFGMVMGNLACTSHGACMVIPGPTFDPVAALTA 269
Query: 178 IAKEKC 183
+ +E C
Sbjct: 270 VEQEHC 275
>gi|418422601|ref|ZP_12995772.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993674|gb|EHM14896.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 544
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKS----LNCRDGINIQFTSGTTGHPKAAFL 111
R + +GT ++++ GA R E + ++ L+ D INIQ+TSGTTG+PK A L
Sbjct: 145 RDVVFIGTSDWTELVAGA----ERVTEAVLRARMSQLSNTDPINIQYTSGTTGYPKGATL 200
Query: 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
+H N++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P
Sbjct: 201 SHRNVLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDP 259
Query: 172 MDSLRAIAKEKCM 184
+L AI +E+C+
Sbjct: 260 GRTLEAIERERCV 272
>gi|385207668|ref|ZP_10034536.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385180006|gb|EIF29282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 576
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGI 94
P A LP R +RM G SD++ QG + + I +L+CRD I
Sbjct: 162 PGELHASRLPE--LRYVIRMCDTETPGMLSFSDVIEQGRASLDVPKLDAIGATLSCRDPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEQD-GLCIPVPLYHCFGMVLSVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P F P +L A+A+E+C
Sbjct: 279 CVSVGANMVFPGEGFDPAATLAAVAEEQC 307
>gi|187927421|ref|YP_001897908.1| AMP-binding domain-containing protein [Ralstonia pickettii 12J]
gi|309779879|ref|ZP_07674633.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|404385126|ref|ZP_10985515.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
gi|187724311|gb|ACD25476.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308921238|gb|EFP66881.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|348616549|gb|EGY66049.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
Length = 571
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A A LP R +RMG +D++ + I+ +L+
Sbjct: 154 ATAQPGALNAAKLPA--LRWVIRMGEAGTPGMLNFADVVARGKSVPVDALDAITATLSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + + D ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185
+L G+ V P +F P+ +LR +A+E+C +
Sbjct: 271 VLTCTATGACMVFPGEAFDPLATLRTVAEERCTQ 304
>gi|444914404|ref|ZP_21234547.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Cystobacter fuscus DSM 2262]
gi|444714636|gb|ELW55515.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Cystobacter fuscus DSM 2262]
Length = 546
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H++++NN F+G+ L D ++ + VP +H F
Sbjct: 177 SLQFDDPINIQYTSGTTGFPKGATLSHHSVLNNGFFVGETLRLSPED-RVCVPVPFYHCF 235
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HGST V+P +F+P+ +RA+ +E+C
Sbjct: 236 GMVMGNLACSSHGSTLVIPGEAFEPLAVMRAVGEERC 272
>gi|317123519|ref|YP_004097631.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315587607|gb|ADU46904.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 543
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I +L D INIQ+TSGTTG PK A L+H N++NN F+G+ + + D ++ + VP +
Sbjct: 180 IQAALKPSDPINIQYTSGTTGFPKGATLSHRNILNNGFFVGELCRYTEAD-RVCIPVPFY 238
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L HG+ V+PAP F P +L+A+ E+C
Sbjct: 239 HCFGMVMGNLACTTHGACMVIPAPGFDPTATLKAVQDEQC 278
>gi|281340026|gb|EFB15610.1| hypothetical protein PANDA_012972 [Ailuropoda melanoleuca]
Length = 453
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 89/149 (59%), Gaps = 7/149 (4%)
Query: 41 RPSAYKADALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKS-LNCRDGINI 96
+P A K+ LP T +++ GT L +++ + H + + ++ L+C D +NI
Sbjct: 222 QPGALKSQRLPDLTTLISVDHPLPGTLLLDEVVATGSKKQHLAQLRYTQQFLSCHDPVNI 281
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD---KTDHKILLQVPMFHTFGTAMGIL 153
QFTSGTTG+PK A L+HYN++NNSN IG RL + +++L P++H G+ G +
Sbjct: 282 QFTSGTTGNPKGATLSHYNIVNNSNLIGDRLRLRLKMPEELRMVLPSPLYHCLGSVAGTM 341
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ +G+T ++ +P+F +L AI+KE+
Sbjct: 342 VCLIYGATLILASPTFDGKKALEAISKER 370
>gi|150014678|gb|ABR57200.1| Acs [Pseudomonas putida]
Length = 557
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 73 AGPEYHRRREQISKS--------LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
A P R + +S+ L C D INIQ+TSGTTG PK A L+H N++NN +G
Sbjct: 175 AWPALQARADAVSREALAERQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYTVG 234
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L + D ++++ VP++H FG M L M HGST + P +F P+ +LRA+A+EK
Sbjct: 235 ESLGLTEHD-RLVVPVPLYHCFGMVMANLGCMTHGSTLIYPNDAFDPLATLRAVAEEK 291
>gi|425900342|ref|ZP_18876933.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889460|gb|EJL05942.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 564
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ G E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLGAGVSVEALRERQ---DSLDPDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P +F P+ +L A+A+EK
Sbjct: 241 ESLGLGHED-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPNDAFDPLLTLGAVAEEK 297
>gi|398781291|ref|ZP_10545417.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
gi|396997535|gb|EJJ08491.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
Length = 546
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++L D +NIQ+TSGTTG PK A L+H+N++NN ++ + L + + D ++ L
Sbjct: 175 RLAECEQTLTADDPVNIQYTSGTTGFPKGATLSHHNILNNGYWVAETLAYTEHD-RVCLP 233
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAP+F +L+ + E+C
Sbjct: 234 VPFYHCFGMVMGNLGATSHGACIVIPAPAFDAATTLQTVQDERC 277
>gi|431802842|ref|YP_007229745.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793607|gb|AGA73802.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 557
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGST + P +F P+ +LRA+A+EK
Sbjct: 257 MVMANLGCMTHGSTLIYPNDAFDPLATLRAVAEEK 291
>gi|150403500|ref|YP_001330794.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C7]
gi|150034530|gb|ABR66643.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C7]
Length = 549
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I K LNC D IN+Q+TSGTTG PK LTH N++NN +IG R +F + D ++ + VP+
Sbjct: 181 RIKKELNCDDVINMQYTSGTTGFPKGVMLTHKNILNNGFYIGDRQKFTEED-RLCITVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + ++ + HG T V+ F P+ L A+ KEKC
Sbjct: 240 FHCFGIVLAVMAILTHGGTMVM-VELFDPLLVLAAVQKEKC 279
>gi|410895361|ref|XP_003961168.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 590
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALR---MGTFRLSDIMQ-GAGPEYHRRREQISK 86
+I P ES+ P ++ LP + + L G F L ++MQ G + R+Q +
Sbjct: 167 RICPEIESS-SPGNIRSSRLPDLRSVVVLDDRPPGMFSLEEVMQLGTSRHLQQLRDQ-QR 224
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHKILLQVPMFHT 145
+L+C D I I FTSGTTG PKA L+H+N+INNSN G R E+D ++D +I + VPMFH
Sbjct: 225 NLSCDDPIKILFTSGTTGFPKAVTLSHFNVINNSNLFGVRSEYDRRSDVRIGIPVPMFHC 284
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + + HG++ V P+ +K L + E+C
Sbjct: 285 FGAVLAGITMAVHGASLVFPSAEYKLKVLLDTLQDERC 322
>gi|229490610|ref|ZP_04384448.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|226184422|dbj|BAH32526.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
gi|229322430|gb|EEN88213.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 545
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H FG MG L
Sbjct: 190 INIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYSEVD-RVCIPVPFYHCFGMVMGNL 248
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+ V+P P+F P SL A+ EKC
Sbjct: 249 ACTSHGAAMVIPGPAFDPRASLEAVQAEKC 278
>gi|108760532|ref|YP_629825.1| AMP-binding protein [Myxococcus xanthus DK 1622]
gi|108464412|gb|ABF89597.1| AMP-binding enzyme [Myxococcus xanthus DK 1622]
Length = 552
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP +H F
Sbjct: 183 SLQFDDAINIQYTSGTTGFPKGATLSHHNVLNNGFFIGEALRYGPED-RVCIPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L +HG+T V+PA +F P+ L+ + E+C
Sbjct: 242 GMVIGNLACTSHGATMVIPAEAFDPLTVLQTVQAERC 278
>gi|333990040|ref|YP_004522654.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486008|gb|AEF35400.1| fatty-acid-CoA ligase FadD35 [Mycobacterium sp. JDM601]
Length = 511
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
++ L D INIQ+TSGTTG+PK L+H N++NN +G L + D +I L VP++H
Sbjct: 147 ARPLRATDPINIQYTSGTTGYPKGVTLSHRNILNNGYLVGDLLGYTHRD-RICLPVPLYH 205
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L A +HG+ ++P P F P +LRA+ +E C
Sbjct: 206 CFGLVMGNLAATSHGAAIILPGPGFDPAATLRAVQEEAC 244
>gi|440797765|gb|ELR18841.1| acylCoA synthetase [Acanthamoeba castellanii str. Neff]
Length = 863
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 71 QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD 130
+ + P+ + + ++++ + D INIQFTSGTTG PK A LTH N++NN F G+R+
Sbjct: 434 KASSPDTRQNLKSLAQAQHVDDAINIQFTSGTTGLPKGATLTHLNILNNGFFAGERMGL- 492
Query: 131 KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D + + VP++H FG +G L A HG+ V P+PS+ P+ L A+ +EKC
Sbjct: 493 TPDDTLCVPVPLYHCFGLVLGNLAAFTHGAKVVYPSPSYDPLKVLEAVQEEKC 545
>gi|86747706|ref|YP_484202.1| AMP-binding protein [Rhodopseudomonas palustris HaA2]
gi|86570734|gb|ABD05291.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 576
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++ G + + Q++ L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 186 GTLAFDEVATMGGDRHRQAIAQLAAELQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGY 245
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++ + D +I + VP++H FG MG L ++ G+ V P F P+ +L+ + E
Sbjct: 246 FVGRAMKLTEQD-RICIPVPLYHCFGMVMGNLASVTCGAAMVYPGEGFDPLATLQTASSE 304
Query: 182 KC 183
KC
Sbjct: 305 KC 306
>gi|453069337|ref|ZP_21972599.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
gi|452763636|gb|EME21916.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H FG MG L
Sbjct: 174 INIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYSEVD-RVCIPVPFYHCFGMVMGNL 232
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+ V+P P+F P SL A+ EKC
Sbjct: 233 ACTSHGAAMVIPGPAFDPRASLEAVQAEKC 262
>gi|392983887|ref|YP_006482474.1| AMP-binding protein [Pseudomonas aeruginosa DK2]
gi|419753428|ref|ZP_14279832.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|384400550|gb|EIE46909.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392319392|gb|AFM64772.1| AMP-binding domain protein [Pseudomonas aeruginosa DK2]
Length = 564
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L + G E R+R+ SL + INIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 179 LPGLAAAVGAEELRQRQ---ASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYMVGA 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L D ++++ VP++H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 236 SLGLGAED-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEER 291
>gi|338983710|ref|ZP_08632875.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
gi|338207360|gb|EGO95332.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
Length = 550
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQFTSGTTG PK A L+H+N++NN F+G+ + + KI + VP++H FG
Sbjct: 192 LQFDDPINIQFTSGTTGAPKGATLSHHNILNNGYFVGRGIGL-RDGEKICIPVPLYHCFG 250
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A+ HG+T V PA F + +L A+A+E+C
Sbjct: 251 MVMGNLAAITHGATMVYPAAGFDALATLTAVAEERC 286
>gi|386334612|ref|YP_006030783.1| long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
gi|421899919|ref|ZP_16330282.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|206591125|emb|CAQ56737.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|334197062|gb|AEG70247.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
Length = 573
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 13/155 (8%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIM---QGAGPEYHRRREQISKSL 88
+ +P A +A LP R +RMG +++ QG G + I+ +L
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGMINFGEVIARGQGEGVSADTL-DAIAAAL 210
Query: 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGT 148
+ D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG
Sbjct: 211 SPDDAINIQFTSGTTGAPKGATLTHINVVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGM 269
Query: 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
M +L G+ V P +F P+ +LR +A+E+C
Sbjct: 270 VMSVLACTATGACMVFPGEAFDPLATLRTVAEERC 304
>gi|126174820|ref|YP_001050969.1| AMP-binding protein [Shewanella baltica OS155]
gi|386341573|ref|YP_006037939.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
gi|125998025|gb|ABN62100.1| AMP-dependent synthetase and ligase [Shewanella baltica OS155]
gi|334863974|gb|AEH14445.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
Length = 570
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G D++ + E I K+L+ D INIQFTSGTTG PK A L+H+N++NN
Sbjct: 181 VGMLNFDDLLVDVTADDKAALESIGKALSPYDAINIQFTSGTTGSPKGATLSHHNILNNG 240
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+ + ++F D K+ + VP++H FG +G L + G+ V P SF P+ +L+ + +
Sbjct: 241 YLVAEAMKFTCHD-KLCIPVPLYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQVVEQ 299
Query: 181 EKC 183
E+C
Sbjct: 300 ERC 302
>gi|421521513|ref|ZP_15968167.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|402754665|gb|EJX15145.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 557
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGS + P+ +F P+ +LRA+A+EK
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEK 291
>gi|115378012|ref|ZP_01465193.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|310819621|ref|YP_003951979.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|115364989|gb|EAU64043.1| long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
gi|309392693|gb|ADO70152.1| Long chain fatty acid-CoA ligase [Stigmatella aurantiaca DW4/3-1]
Length = 547
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP +H F
Sbjct: 178 SLQFDDAINIQYTSGTTGFPKGATLSHHNVLNNGFFIGETLRYGAED-RVCIPVPFYHCF 236
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L +HG+ V+PA +F+P+ + A+ E+C
Sbjct: 237 GMVIGNLACTSHGACMVIPAEAFEPLAVMEAVQAERC 273
>gi|254298706|ref|ZP_04966157.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
gi|157808515|gb|EDO85685.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
Length = 570
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 176 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 235
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 236 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 294
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 295 AVSDERC 301
>gi|54026121|ref|YP_120363.1| AMP-binding protein [Nocardia farcinica IFM 10152]
gi|54017629|dbj|BAD58999.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 555
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ L D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I +
Sbjct: 179 RLAELGAELTMDDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTEQD-RICVP 237
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L A +HG+ V+PAPSF P +L A+A EKC
Sbjct: 238 VPFYHCFGMVMGNLAATSHGAAIVIPAPSFDPAATLAAVAAEKC 281
>gi|393764545|ref|ZP_10353150.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
gi|392729910|gb|EIZ87170.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
Length = 413
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++ G R ++ L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 22 GTIAFEEVAALGGAGERARLRGLADQLQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGF 81
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ L D +I + VP++H FG +G L A+ HGS V P F P +L + E
Sbjct: 82 FIGRALRLGAAD-RICIPVPLYHCFGMVIGNLAALTHGSAMVYPGEGFDPHATLETVQAE 140
Query: 182 KC 183
C
Sbjct: 141 GC 142
>gi|303246537|ref|ZP_07332816.1| AMP-dependent synthetase and ligase [Desulfovibrio fructosovorans
JJ]
gi|302492247|gb|EFL52122.1| AMP-dependent synthetase and ligase [Desulfovibrio fructosovorans
JJ]
Length = 557
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+ C D +N+Q+TSGTTG PK L+H+N++NN IG+R F D K+ +QVP+FH F
Sbjct: 195 TFTCHDVVNMQYTSGTTGFPKGVMLSHHNIVNNGYSIGQRQRFTNKD-KLCVQVPLFHCF 253
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G++ +NHG TT+V F P+ S+ +I +EKC
Sbjct: 254 GCVLGVMACVNHG-TTMVFTEVFNPIHSMMSIEQEKC 289
>gi|26990171|ref|NP_745596.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985110|gb|AAN69060.1|AE016539_1 long-chain-fatty-acid-CoA ligase, putative [Pseudomonas putida
KT2440]
Length = 562
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGS + P+ +F P+ +LRA+A+EK
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEK 291
>gi|357387650|ref|YP_004902489.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
gi|311894125|dbj|BAJ26533.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
Length = 562
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
QI + L+ D INIQ+TSGTTG PK A L+H N++NN F+G+ + + D +I + VP
Sbjct: 197 QIERGLSADDPINIQYTSGTTGFPKGATLSHRNILNNGYFVGELCNYTERD-RICIPVPF 255
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A++HG+ TV+PAP+F +L A+A E+C
Sbjct: 256 YHCFGMVMGNLAAVSHGACTVIPAPAFDAATTLAAVAAERC 296
>gi|386011894|ref|YP_005930171.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498600|gb|ADR59966.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 557
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGS + P+ +F P+ +LRA+A+EK
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEK 291
>gi|148261347|ref|YP_001235474.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
gi|146403028|gb|ABQ31555.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
Length = 550
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQFTSGTTG PK A L+H+N++NN F+G+ + + KI + VP++H FG
Sbjct: 192 LQFDDPINIQFTSGTTGAPKGATLSHHNILNNGYFVGRGIGL-RDGEKICIPVPLYHCFG 250
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A+ HG+T V PA F + +L A+A+E+C
Sbjct: 251 MVMGNLAAITHGATMVYPAAGFDALATLTAVAEERC 286
>gi|254186486|ref|ZP_04893003.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194656|ref|ZP_04901087.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403520675|ref|YP_006654809.1| AMP-binding protein [Burkholderia pseudomallei BPC006]
gi|157934171|gb|EDO89841.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|169651406|gb|EDS84099.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403076317|gb|AFR17897.1| AMP-binding domain protein [Burkholderia pseudomallei BPC006]
Length = 570
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 176 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 235
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 236 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 294
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 295 AVSDERC 301
>gi|395764069|ref|ZP_10444738.1| AMP-binding domain protein [Janthinobacterium lividum PAMC 25724]
Length = 559
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 38 SNPRPSAYKADALPT--KLTRL--ALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
+ R A ++ LP + RL A G +M+G E++S +L D
Sbjct: 144 AGSRAGALRSSRLPQLRHVIRLGAAATPGMHNFDALMEGISDADLAHLEEVSATLQFDDA 203
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+NIQFTSGTTG PK A LTH+N+INN FIG+ + + D ++ + VP++H FG +G L
Sbjct: 204 VNIQFTSGTTGAPKGATLTHHNIINNGFFIGEAMRLTEHD-RLCIPVPLYHCFGMVLGNL 262
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V P F P L + E+C
Sbjct: 263 ACVTHGAAMVFPGEGFDPKSVLGTVQAERC 292
>gi|319764461|ref|YP_004128398.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317119022|gb|ADV01511.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 573
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S++M G R I +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 183 GALRFSELM-ARGDAQDARVAAIGATLKHTDPINIQFTSGTTGFPKGATLTHRNILNNGF 241
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + +D ++ + VP++H FG +G L + HG+T V P+ F P+ L + E
Sbjct: 242 FIGECMRLTPSD-RLCIPVPLYHCFGMVLGNLACITHGATIVYPSDGFDPLRVLETVQAE 300
Query: 182 KC 183
+C
Sbjct: 301 RC 302
>gi|148547532|ref|YP_001267634.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|395449760|ref|YP_006390013.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|148511590|gb|ABQ78450.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|388563757|gb|AFK72898.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 557
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGS + P+ +F P+ +LRA+A+EK
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEK 291
>gi|254184020|ref|ZP_04890611.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
gi|184214552|gb|EDU11595.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
Length = 570
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 176 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 235
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 236 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 294
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 295 AVSDERC 301
>gi|67643093|ref|ZP_00441842.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
gi|124383885|ref|YP_001027564.1| AMP-binding protein [Burkholderia mallei NCTC 10229]
gi|254175161|ref|ZP_04881822.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|254201539|ref|ZP_04907903.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|254206875|ref|ZP_04913226.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|254357430|ref|ZP_04973704.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|124291905|gb|ABN01174.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10229]
gi|147747433|gb|EDK54509.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|147752417|gb|EDK59483.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|148026494|gb|EDK84579.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|160696206|gb|EDP86176.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|238524342|gb|EEP87775.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
Length = 570
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 176 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 235
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 236 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 294
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 295 AVSDERC 301
>gi|322419002|ref|YP_004198225.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320125389|gb|ADW12949.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 549
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ K+L+ D IN+Q+TSGTTG PK LTH+N++NN IG+ + F + D ++ + VP F
Sbjct: 183 VEKTLSVHDVINMQYTSGTTGFPKGVMLTHHNVVNNGFNIGECMRFTEKD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G+L + HG TT+VP F P+ L+AI +E+C
Sbjct: 242 HCFGCVLGVLACVTHG-TTMVPVEIFDPLKVLQAIERERC 280
>gi|172059174|ref|YP_001806826.1| AMP-binding domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171991691|gb|ACB62610.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 575
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 42 PSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINI 96
P +A +P+ T +++ G FR +D+M +G + I +L D INI
Sbjct: 161 PGDLRAARVPSLRTVVSMGEVAPAGMFRFADVMARGRDTLDVAWLDAIGATLAATDPINI 220
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PK A LTH N++NN+ FI + F + D + + VP++H FG + +L +
Sbjct: 221 QFTSGTTGSPKGATLTHCNVVNNARFIAMAMRFSEQD-ALCIPVPLYHCFGMVLAVLACV 279
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+ V P +F P+ +L A+A E+C
Sbjct: 280 SKGAAMVFPGEAFDPVATLAAVADERC 306
>gi|374607766|ref|ZP_09680566.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373554328|gb|EHP80907.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 542
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ INIQ+TSGTTG PK A L+H N++NN F + + F TD ++ + VP +H F
Sbjct: 176 SLDHHQPINIQYTSGTTGFPKGATLSHCNILNNGYFTTELINFGPTD-RLCIPVPFYHCF 234
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+PAP+F P +L AI KE+C
Sbjct: 235 GMVMGNLGCTSHGATMVIPAPAFDPALTLDAIEKERC 271
>gi|326404834|ref|YP_004284916.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
gi|325051696|dbj|BAJ82034.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
Length = 550
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQFTSGTTG PK A L+H+N++NN F+G+ + + KI + VP++H FG
Sbjct: 192 LQFDDPINIQFTSGTTGAPKGATLSHHNILNNGYFVGQGIGL-RDGEKICIPVPLYHCFG 250
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A+ HG+T V PA F + +L A+A+E+C
Sbjct: 251 MVMGNLAAITHGATMVYPAAGFDALATLTAVAEERC 286
>gi|83746599|ref|ZP_00943649.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|207742291|ref|YP_002258683.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
gi|83726733|gb|EAP73861.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|206593679|emb|CAQ60606.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
Length = 573
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Query: 41 RPSAYKADALPTKLTRLALRMG------TFRLSDIM---QGAGPEYHRRREQISKSLNCR 91
+P A +A LP R +RMG +++ QG G + I+ +L+
Sbjct: 157 QPGALQAAKLPA--LRWVIRMGEGATPGMINFGEVIARGQGEGVSADTL-DAIAAALSPD 213
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 214 DAINIQFTSGTTGAPKGATLTHINVVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGMVMS 272
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 273 VLACTATGACMVFPGEAFDPLATLRTVAEERC 304
>gi|421889438|ref|ZP_16320475.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
gi|378965202|emb|CCF97223.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
Length = 571
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A +A LP R +RMG +++ + I+ +L+
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGMINFGEVIARGQGVSADTLDAIAAALSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 271 VLACTATGACMVFPGEAFDPLATLRTVAEERC 302
>gi|241763894|ref|ZP_04761938.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241366862|gb|EER61284.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 576
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ G R Q++ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 186 GLLRFSDLI-ARGNVADPRLAQVAATLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 244
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HG+T V P F P+ L+ + E
Sbjct: 245 FIGECMKLTPED-RLCIPVPLYHCFGMVLGNLACLTHGATIVYPNDGFDPLTVLQTVQDE 303
Query: 182 KC 183
+C
Sbjct: 304 RC 305
>gi|153005842|ref|YP_001380167.1| AMP-binding domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152029415|gb|ABS27183.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 546
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +SL + INIQ+TSGTTG PK A L+H+N++NN F+G+ L + + D ++ + VP +
Sbjct: 174 VERSLQFDEPINIQYTSGTTGFPKGATLSHHNILNNGYFVGQHLRYTEHD-RVCIPVPFY 232
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG MG L + G+T V+PA SF+P +R + +E+C
Sbjct: 233 HCFGMVMGNLACTSAGATMVIPAESFEPRAVMRTVQEERC 272
>gi|324997477|ref|ZP_08118589.1| AMP-binding domain protein [Pseudonocardia sp. P1]
Length = 571
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I SL D INIQ+TSGTTG PK A L+H+N++NN ++GK + + D ++ +
Sbjct: 194 RLAEIQASLAADDPINIQYTSGTTGFPKGATLSHHNILNNGYYVGKLCGYTEAD-RVCIP 252
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +G+T V+PA F P +L+A+ +E+C
Sbjct: 253 VPFYHCFGMVMGNLGCTTNGATMVIPAQGFDPKATLKAVEQERC 296
>gi|392953725|ref|ZP_10319279.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391859240|gb|EIT69769.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 575
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A LP RL +R+G S ++ E R + I+ +++ +N
Sbjct: 157 PGQLHAARLPQ--LRLVIRLGDEVSPGMLGFSSLLSEPAAEARARLDAIASAVDAHSAVN 214
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN F+G+ + D K+ + VP++H FG MG L
Sbjct: 215 IQFTSGTTGSPKGATLTHRNILNNGYFVGRAMRLTHDD-KLCIPVPLYHCFGMVMGNLAC 273
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V PA SF L+ + E+C
Sbjct: 274 VTHGACMVFPADSFDAASVLQTVQDERC 301
>gi|430806585|ref|ZP_19433700.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
gi|429501182|gb|EKZ99525.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
Length = 570
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A A LP L R +RM G +++ ++I+ L+ RD IN
Sbjct: 158 PGALNAARLP--LLRWVIRMEDVPTPGMLTFRELLVRGANVPKTALDEITAGLDARDPIN 215
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN I + F + D K+ + VP +H FG +G+L
Sbjct: 216 IQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQD-KLCIPVPFYHCFGMVLGVLAC 274
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G++ V P +F P ++ A+++E+C
Sbjct: 275 VSTGASMVFPGEAFHPGATMAAVSEERC 302
>gi|312140942|ref|YP_004008278.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890281|emb|CBH49599.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 550
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 188 ALSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEHD-RVCIPVPFYHCF 246
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+ V+P P+F+P +L A+ E+C
Sbjct: 247 GMVMGNLACTSHGAAMVIPGPAFEPAATLAAVQAERC 283
>gi|332262429|ref|XP_003280265.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Nomascus leucogenys]
Length = 721
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 94/159 (59%), Gaps = 8/159 (5%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKS 87
+I P E N +P K+ LP T ++ +GT L +++ + H + Q ++
Sbjct: 298 QICPDVE-NAKPGXLKSQRLPDLTTVFSVDAPLLGTLLLDEVVVAGSTQQHLDQLQYNQQ 356
Query: 88 -LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF-DKTDHKI--LLQVPMF 143
L+C D INIQFTSGTTG PK A L+HYN++ NS+ +G+RL+ +KT ++ +L P++
Sbjct: 357 FLSCHDPINIQFTSGTTGSPKGATLSHYNIVKNSSMLGERLKLHEKTPEQLRMILPSPLY 416
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
H G+ G + + +G+T ++ +P F +L AI++E+
Sbjct: 417 HCLGSVGGTMMCLMYGATLILASPVFNGKKALEAISRER 455
>gi|325675420|ref|ZP_08155104.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
gi|325553391|gb|EGD23069.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
Length = 550
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 188 ALSADDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCGYTEHD-RVCIPVPFYHCF 246
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+ V+P P+F+P +L A+ E+C
Sbjct: 247 GMVMGNLACTSHGAAMVIPGPAFEPAATLAAVQAERC 283
>gi|309812333|ref|ZP_07706088.1| AMP-binding domain protein [Dermacoccus sp. Ellin185]
gi|308433638|gb|EFP57515.1| AMP-binding domain protein [Dermacoccus sp. Ellin185]
Length = 502
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + K+L D INIQ+TSGTTG PK A L+H N++NN F+G+ + D ++ +
Sbjct: 187 RLAAVQKTLKNTDAINIQYTSGTTGFPKGATLSHRNILNNGFFVGELCSYTAED-RVCIP 245
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG MG L +HG+T V+PAP F +L+ + E+C
Sbjct: 246 VPFYHCFGMVMGNLACTSHGATMVIPAPGFDAALTLQTVVDERC 289
>gi|212538689|ref|XP_002149500.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces marneffei
ATCC 18224]
gi|210069242|gb|EEA23333.1| long-chain-fatty-acid-CoA ligase, putative [Talaromyces marneffei
ATCC 18224]
Length = 598
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +N+QFTSG+TG+PKA+ LTH+NLINNS FIG R++ +D + P+FH FG +G
Sbjct: 222 DVVNLQFTSGSTGNPKASMLTHHNLINNSRFIGDRMDLTYSD-VLCCPPPLFHCFGLVLG 280
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P +F P + AI+KE+C
Sbjct: 281 LLACITHGAKIVYPNETFDPAAVIDAISKERC 312
>gi|146292779|ref|YP_001183203.1| AMP-binding protein [Shewanella putrefaciens CN-32]
gi|386313458|ref|YP_006009623.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|145564469|gb|ABP75404.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|319426083|gb|ADV54157.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 570
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E I+K L+ D INIQFTSGTTG PK A L+H+N++NN + + ++F D K+ + VP
Sbjct: 202 ESIAKELSSYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHD-KLCIPVP 260
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L + G+ V P SF P+ +L+ I +E+C
Sbjct: 261 LYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQVIEQERC 302
>gi|300705200|ref|YP_003746803.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
gi|299072864|emb|CBJ44220.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
Length = 571
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
+ +P A +A LP R +RMG +++ + I+ +L+
Sbjct: 154 ATAQPGALQAAKLPA--LRWVIRMGEGATPGMINFGEVIARGQGVSTDTLDAITAALSPD 211
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG PK A LTH N++NN+ F+ + TD ++ + VP++H FG M
Sbjct: 212 DAINIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQGTD-RLCIPVPLYHCFGMVMS 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L G+ V P +F P+ +LR +A+E+C
Sbjct: 271 VLACTATGACMVFPGEAFDPLATLRTVAEERC 302
>gi|390569476|ref|ZP_10249761.1| AMP-binding domain protein [Burkholderia terrae BS001]
gi|389938336|gb|EIN00180.1| AMP-binding domain protein [Burkholderia terrae BS001]
Length = 576
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGI 94
P +A LP R+ +RM G SD+++ + R + I +L+ D I
Sbjct: 162 PGDLRAARLPE--LRIVIRMCDTETPGMLTFSDVIERGRTAFDPARLDAIGAALDANDPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEQD-SLCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P +L+A+A+EKC
Sbjct: 279 CVSVGAAMVFPGEAFDPGATLKAVAEEKC 307
>gi|405372113|ref|ZP_11027377.1| Acetoacetyl-CoA synthetase/ Long-chain-fatty-acid--CoA ligase
[Chondromyces apiculatus DSM 436]
gi|397088486|gb|EJJ19467.1| Acetoacetyl-CoA synthetase/ Long-chain-fatty-acid--CoA ligase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 549
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP +H F
Sbjct: 180 SLQFDDAINIQYTSGTTGSPKGATLSHHNVLNNGFFIGEALRYGPED-RVCIPVPFYHCF 238
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L +HG+T V+PA +F P+ L+ + E+C
Sbjct: 239 GMVIGNLACTSHGATMVIPAEAFDPLLVLQTVQAERC 275
>gi|330826677|ref|YP_004389980.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329312049|gb|AEB86464.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 573
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S++M G R I +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 183 GALRFSELM-ARGDAQDARVAAIGATLKHTDPINIQFTSGTTGFPKGATLTHRNILNNGF 241
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L + HG+T V P+ F P+ L + E
Sbjct: 242 FIGECMRLTPAD-RLCIPVPLYHCFGMVLGNLACITHGATIVYPSDGFDPLRVLETVQAE 300
Query: 182 KC 183
+C
Sbjct: 301 RC 302
>gi|419708416|ref|ZP_14235886.1| AMP-binding domain protein [Mycobacterium abscessus M93]
gi|382944448|gb|EIC68756.1| AMP-binding domain protein [Mycobacterium abscessus M93]
Length = 546
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 56 RLALRMGTFRLSDIMQGAG----PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFL 111
R + +GT ++++ GA R Q+S + D INIQ+TSGTTG+PK A L
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTEAALRARMSQLSNT----DPINIQYTSGTTGYPKGATL 200
Query: 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
+H N++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P
Sbjct: 201 SHRNVLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDP 259
Query: 172 MDSLRAIAKEKCM 184
+L AI +E+C+
Sbjct: 260 GRTLEAIERERCV 272
>gi|397680629|ref|YP_006522164.1| acyl-CoA synthetase YngI [Mycobacterium massiliense str. GO 06]
gi|414582915|ref|ZP_11440055.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|418251261|ref|ZP_12877458.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|420880763|ref|ZP_15344130.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|420886457|ref|ZP_15349817.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|420891999|ref|ZP_15355346.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|420895610|ref|ZP_15358949.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|420900054|ref|ZP_15363385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|420905599|ref|ZP_15368917.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|420933639|ref|ZP_15396913.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|420937662|ref|ZP_15400931.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|420943901|ref|ZP_15407156.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|420947586|ref|ZP_15410836.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|420954009|ref|ZP_15417251.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|420958183|ref|ZP_15421417.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|420963887|ref|ZP_15427111.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|420973839|ref|ZP_15437030.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|420994126|ref|ZP_15457272.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|420999902|ref|ZP_15463037.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|421004424|ref|ZP_15467546.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|353449086|gb|EHB97485.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|392079259|gb|EIU05086.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|392082220|gb|EIU08046.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|392085672|gb|EIU11497.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|392094922|gb|EIU20717.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|392097415|gb|EIU23209.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|392103503|gb|EIU29289.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|392118067|gb|EIU43835.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|392133502|gb|EIU59245.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|392143177|gb|EIU68902.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|392145507|gb|EIU71231.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|392152922|gb|EIU78629.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|392154616|gb|EIU80322.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|392161722|gb|EIU87412.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|392178684|gb|EIV04337.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|392180228|gb|EIV05880.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|392193127|gb|EIV18751.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|392246800|gb|EIV72277.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|392247909|gb|EIV73385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|395458894|gb|AFN64557.1| Putative acyl-CoA synthetase YngI [Mycobacterium massiliense str.
GO 06]
Length = 546
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 56 RLALRMGTFRLSDIMQGAG----PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFL 111
R + +GT ++++ GA R Q+S + D INIQ+TSGTTG+PK A L
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTEAALRARMSQLSNA----DPINIQYTSGTTGYPKGATL 200
Query: 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
+H N++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P
Sbjct: 201 SHRNVLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDP 259
Query: 172 MDSLRAIAKEKCM 184
+L AI +E+C+
Sbjct: 260 GRTLEAIERERCV 272
>gi|449479413|ref|XP_004176398.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Taeniopygia guttata]
Length = 661
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF + ++MQ + ++ + ++L+C + INIQFTSGTTG PK A L+H N++NN+N
Sbjct: 272 GTFHMDEVMQAGDSSHLKQLRAVQQTLSCHEPINIQFTSGTTGSPKGATLSHRNIVNNAN 331
Query: 122 FIGKRLEFDKTDHKIL-----LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+G RL TD L L P++H + G + HG++ + +PSF+ +L
Sbjct: 332 LVGLRLGI--TDQVGLESRSGLPAPLYHCLASVGGCMVMALHGTSCIFSSPSFEGKAALE 389
Query: 177 AIAKEKC 183
A+++EKC
Sbjct: 390 AVSREKC 396
>gi|419716125|ref|ZP_14243523.1| AMP-binding domain protein [Mycobacterium abscessus M94]
gi|382941331|gb|EIC65650.1| AMP-binding domain protein [Mycobacterium abscessus M94]
Length = 546
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 56 RLALRMGTFRLSDIMQGAG----PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFL 111
R + +GT ++++ GA R Q+S + D INIQ+TSGTTG+PK A L
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTEAALRARMSQLSNT----DPINIQYTSGTTGYPKGATL 200
Query: 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
+H N++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P
Sbjct: 201 SHRNVLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDP 259
Query: 172 MDSLRAIAKEKCM 184
+L AI +E+C+
Sbjct: 260 GRTLEAIERERCV 272
>gi|352080679|ref|ZP_08951618.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
gi|351683960|gb|EHA67036.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
Length = 557
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + L D +NIQFTSGTTG PK A LTH+N++NN FIG+ + + D ++ + VP
Sbjct: 194 EVERELGFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEYD-RLCIPVPF 252
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + HG+ V+P F + +L +A+EKC
Sbjct: 253 YHCFGMVLGNLACVTHGACMVIPGEGFDALATLETVAEEKC 293
>gi|389797499|ref|ZP_10200540.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
gi|388447131|gb|EIM03144.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
Length = 557
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + L D +NIQFTSGTTG PK A LTH+N++NN FIG+ + + D ++ + VP
Sbjct: 194 EVERELGFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEYD-RLCIPVPF 252
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + HG+ V+P F + +L +A+EKC
Sbjct: 253 YHCFGMVLGNLACVTHGACMVIPGEGFDALATLETVAEEKC 293
>gi|192288893|ref|YP_001989498.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192282642|gb|ACE99022.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 564
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++ G + + + L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 174 GTIAFDEVAAMGGARHRDQIAAFASELQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++ + D +I + VP++H FG MG L ++ G+ V P F P+ +L+ ++E
Sbjct: 234 FVGRAMKLTEAD-RICIPVPLYHCFGMVMGNLASVTSGAAMVYPGEGFDPLVTLQTASRE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|145236613|ref|XP_001390954.1| long-chain-fatty-acid-CoA ligase [Aspergillus niger CBS 513.88]
gi|134075413|emb|CAK39200.1| unnamed protein product [Aspergillus niger]
gi|350630193|gb|EHA18566.1| hypothetical protein ASPNIDRAFT_47271 [Aspergillus niger ATCC 1015]
Length = 584
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 37/180 (20%)
Query: 40 PRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGP-------------------EYH-- 78
PR Y D ++ + R+G L D++ GP EY
Sbjct: 125 PRELYYALDHTDCRVVFMTPRIGRHALEDVLAELGPQPKQNGKSAALEEIVILRGEYQNF 184
Query: 79 -------RRREQISKS--------LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI 123
+R E++ S L D N+QFTSG+TG+PKAA LTH+NL+NNS FI
Sbjct: 185 STYNDVIQRGEKLPNSALPDREAELRPDDVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFI 244
Query: 124 GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G R++ D + P+FH FG +G+L + HGS V P+ +F P L AI+ EKC
Sbjct: 245 GDRMDLTSFD-ILCCPPPLFHCFGLVLGMLAVVTHGSKIVFPSETFDPKAVLHAISDEKC 303
>gi|170699476|ref|ZP_02890519.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170135625|gb|EDT03910.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 575
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G + I +L D INIQFTSGTTG PK A LTH N++NN+
Sbjct: 185 GMFRFADVMARGRDTLDVAWLDAIGATLAATDPINIQFTSGTTGSPKGATLTHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FI + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A
Sbjct: 245 RFIAMAMRFSEQD-SLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAAVAD 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|421470089|ref|ZP_15918496.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
gi|400228507|gb|EJO58436.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
Length = 575
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRD 92
+N P +A +P+ T +++ G FR +D++ +G + + +L D
Sbjct: 157 ANAAPGELRAARVPSLRTVVSMGDVAPPGMFRFADVIARGRASVDSAALDALGATLAPSD 216
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN+ FI + F + D + + VP++H FG + +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFTEQD-ALCIPVPLYHCFGMVLAV 275
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|169631453|ref|YP_001705102.1| AMP-binding domain-containing protein [Mycobacterium abscessus ATCC
19977]
gi|420912039|ref|ZP_15375351.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|420918500|ref|ZP_15381803.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|420923662|ref|ZP_15386958.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|420929323|ref|ZP_15392602.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|420969000|ref|ZP_15432203.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
gi|420979661|ref|ZP_15442838.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|420985045|ref|ZP_15448212.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|421010205|ref|ZP_15473314.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|421015206|ref|ZP_15478281.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|421020303|ref|ZP_15483359.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|421026289|ref|ZP_15489332.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|421031530|ref|ZP_15494560.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|421036336|ref|ZP_15499353.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|169243420|emb|CAM64448.1| Probable fatty-acid-CoA ligase [Mycobacterium abscessus]
gi|392111391|gb|EIU37161.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|392114033|gb|EIU39802.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|392126311|gb|EIU52062.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|392128315|gb|EIU54065.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|392163939|gb|EIU89628.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|392170041|gb|EIU95719.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|392195811|gb|EIV21430.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|392198278|gb|EIV23892.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|392206026|gb|EIV31609.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|392209812|gb|EIV35384.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|392219412|gb|EIV44937.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|392220188|gb|EIV45712.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|392244656|gb|EIV70134.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
Length = 546
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +GT ++++ GA L+ D INIQ+TSGTTG+PK A L+H N
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTETALRARMSQLSNTDPINIQYTSGTTGYPKGATLSHRN 204
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P +L
Sbjct: 205 VLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRTL 263
Query: 176 RAIAKEKCM 184
AI +E+C+
Sbjct: 264 EAIERERCV 272
>gi|117920918|ref|YP_870110.1| AMP-binding protein [Shewanella sp. ANA-3]
gi|117613250|gb|ABK48704.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sp.
ANA-3]
Length = 574
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 46 KADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
+A ALP + +RMG D++ + E+I++SL+ D INIQFT
Sbjct: 166 QAKALPD--LQFVIRMGAEQSPGMLNFDDLLVEVTADDKAALERIAESLSPYDAINIQFT 223
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A L+H+N++NN + + ++F D K+ + VP++H FG +G L + G
Sbjct: 224 SGTTGSPKGATLSHHNILNNGYLVAEAMKFTCED-KLCIPVPLYHCFGMVLGNLVCLAKG 282
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
+ V P SF P+ +L + +E+C
Sbjct: 283 AAAVFPGDSFDPLTTLEVVERERC 306
>gi|347540717|ref|YP_004848142.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643895|dbj|BAK77728.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 562
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P A +A LPT + +RMG + ++ L D IN
Sbjct: 148 PGALRAARLPT--LEMVIRMGGEASPGMLNFNQLLAEPTEAERAMLADTGAGLQFDDPIN 205
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A L+H+N++NN F+G+ ++ D ++ + VP++H FG +G L
Sbjct: 206 IQFTSGTTGSPKGATLSHHNILNNGFFVGEAMKLVPGD-RLCIPVPLYHCFGMVLGNLAC 264
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T + P +F+P+ L+ +A+EKC
Sbjct: 265 LTHGTTMIFPCEAFEPLAVLQTVAEEKC 292
>gi|444357091|ref|ZP_21158673.1| AMP-binding enzyme [Burkholderia cenocepacia BC7]
gi|443606649|gb|ELT74414.1| AMP-binding enzyme [Burkholderia cenocepacia BC7]
Length = 569
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G + I +L+ D INIQFTSGTTG PK A LTH N++NN+
Sbjct: 179 GMFRFADVMARGRRAVDPALLDAIGATLSANDPINIQFTSGTTGSPKGATLTHRNVVNNA 238
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A+
Sbjct: 239 RSIAMAMRFTEQD-SLCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEAFDPVATLAAVAE 297
Query: 181 EKC 183
E+C
Sbjct: 298 ERC 300
>gi|221202175|ref|ZP_03575210.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
gi|221208764|ref|ZP_03581763.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221171396|gb|EEE03844.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221177969|gb|EEE10381.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
Length = 575
Score = 99.4 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRD 92
+N P +A +P+ T +++ G FR +D++ +G + + +L D
Sbjct: 157 ANAAPGELRAARVPSLRTVVSMGDVAPPGMFRFADVIARGRASVDSAALDALGATLAPSD 216
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
INIQFTSGTTG PK A LTH N++NN+ FI + F + D + + VP++H FG + +
Sbjct: 217 PINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFTEQD-ALCIPVPLYHCFGMVLAV 275
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|39933535|ref|NP_945811.1| AMP-binding protein [Rhodopseudomonas palustris CGA009]
gi|39647381|emb|CAE25902.1| possible fatty acid-CoA ligases [Rhodopseudomonas palustris CGA009]
Length = 517
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++ G + + + L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 127 GTIAFDEVAAMGGARHRDQIAAFASELQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGY 186
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++ + D +I + VP++H FG MG L ++ G+ V P F P+ +L+ ++E
Sbjct: 187 FVGRAMKLTEAD-RICIPVPLYHCFGMVMGNLASVTSGAAMVYPGEGFDPLVTLQTASRE 245
Query: 182 KC 183
KC
Sbjct: 246 KC 247
>gi|330509006|ref|YP_004385434.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
gi|328929814|gb|AEB69616.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
Length = 569
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ D INIQ+TSGTTG PK LTH+N++NN FIG+ ++F + D ++ + VP +H F
Sbjct: 200 SLDFDDPINIQYTSGTTGFPKGVVLTHHNILNNGYFIGECMKFTEED-RLCIPVPFYHCF 258
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + + ++ HG+ V+PA F P+ +L A+ KE+C
Sbjct: 259 GMVLSNMASVTHGTAMVLPAEHFDPVSTLSAVEKERC 295
>gi|70996664|ref|XP_753087.1| long-chain-fatty-acid-CoA ligase [Aspergillus fumigatus Af293]
gi|66850722|gb|EAL91049.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus fumigatus
Af293]
gi|159131823|gb|EDP56936.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus fumigatus
A1163]
Length = 590
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R+ D + P+FH FG
Sbjct: 209 LHSTDVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMNLTSFD-ILCCPPPLFHCFG 267
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+L + HGS + P+ +F P L AI+ EKC
Sbjct: 268 LVLGMLAVVTHGSKIIFPSETFDPTAVLHAISDEKC 303
>gi|338529851|ref|YP_004663185.1| AMP-binding domain-containing protein [Myxococcus fulvus HW-1]
gi|337255947|gb|AEI62107.1| AMP-binding domain protein [Myxococcus fulvus HW-1]
Length = 549
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP +H F
Sbjct: 180 SLQFDDPINIQYTSGTTGFPKGATLSHHNVLNNGFFIGEALRYGPED-RVCIPVPFYHCF 238
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L +HG+T V+PA +F P+ L+ + E+C
Sbjct: 239 GMVIGNLACTSHGATMVIPAEAFDPLTVLQTVQAERC 275
>gi|254516352|ref|ZP_05128411.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
gi|219674775|gb|EED31142.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
Length = 569
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIM-------QGAGPEYHRRREQ 83
++ P +S P ++ LP +RMGT ++ + AG + +
Sbjct: 140 QLAPELDSLPEGEKLRSSKLPH--LEFVIRMGTALTPGMLNFDTVRVKAAGMDSAQLDAA 197
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+K L D INIQFTSGTTG PK A LTH N++NN+ F G + D K+ + VP++
Sbjct: 198 TAK-LKADDAINIQFTSGTTGSPKGATLTHRNILNNAVFTGVSMHLTPQD-KLCIPVPLY 255
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L + HG+T V P SF P+ +L + E+C
Sbjct: 256 HCFGMVLGTLVCVTHGATAVFPGESFDPLATLETVQAERC 295
>gi|402830951|ref|ZP_10879644.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402283000|gb|EJU31522.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 539
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN+ FIG R+ + D ++ + VP +H FG +G
Sbjct: 180 DPVNIQYTSGTTGNPKGVTLSHHNILNNAYFIGLRMNYSHVD-RVCIPVPFYHCFGMVIG 238
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T VVP SF P+ +L I KE+C
Sbjct: 239 NLACTVHGATMVVPNDSFDPVKTLETIEKERC 270
>gi|316931557|ref|YP_004106539.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315599271|gb|ADU41806.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 564
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT ++ G + + + L D +NIQFTSGTTG PK LTH+N++NN
Sbjct: 174 GTIAFDEVATMGGARHRDQIAAFASELQFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ ++ + D +I + VP++H FG MG L ++ G+ V P F P+ +L+ ++E
Sbjct: 234 FVGRAMKLTEVD-RICIPVPLYHCFGMVMGNLASVTCGAAMVYPGEGFDPLVTLQTASRE 292
Query: 182 KC 183
KC
Sbjct: 293 KC 294
>gi|226365555|ref|YP_002783338.1| AMP-binding domain protein [Rhodococcus opacus B4]
gi|226244045|dbj|BAH54393.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 545
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H F
Sbjct: 183 ALSPDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVGELCHYTEND-RVCIPVPFYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HG+T V+P SF P +L+A+ EKC
Sbjct: 242 GMVMGNLACTSHGATMVIPGRSFDPKATLQAVEAEKC 278
>gi|153001163|ref|YP_001366844.1| AMP-binding domain-containing protein [Shewanella baltica OS185]
gi|160875833|ref|YP_001555149.1| AMP-binding domain-containing protein [Shewanella baltica OS195]
gi|217972916|ref|YP_002357667.1| AMP-binding domain-containing protein [Shewanella baltica OS223]
gi|378709035|ref|YP_005273929.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|418024593|ref|ZP_12663575.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
gi|151365781|gb|ABS08781.1| AMP-dependent synthetase and ligase [Shewanella baltica OS185]
gi|160861355|gb|ABX49889.1| AMP-dependent synthetase and ligase [Shewanella baltica OS195]
gi|217498051|gb|ACK46244.1| AMP-dependent synthetase and ligase [Shewanella baltica OS223]
gi|315268024|gb|ADT94877.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|353535879|gb|EHC05439.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
Length = 570
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G D++ + E I K+L+ D INIQFTSGTTG PK A L+H+N++NN
Sbjct: 181 VGMLNFDDLLVDVTADDKAALESIGKALSPYDSINIQFTSGTTGSPKGATLSHHNILNNG 240
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+ + ++F D K+ + VP++H FG +G L + G+ V P SF P+ +L+ I +
Sbjct: 241 YLVAEAMKFTCHD-KLCIPVPLYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQVIEQ 299
Query: 181 EKC 183
E C
Sbjct: 300 EGC 302
>gi|348170337|ref|ZP_08877231.1| AMP-binding domain protein [Saccharopolyspora spinosa NRRL 18395]
Length = 541
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D +I + VP +H FG
Sbjct: 177 LSTDDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCGYTE-DDRICIPVPFYHCFG 235
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HG+ ++PA F P SL ++A E+C
Sbjct: 236 MVMGNLAATSHGAAMIIPATGFDPAASLASVAAERC 271
>gi|149377184|ref|ZP_01894932.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149358483|gb|EDM46957.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 562
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++ + AG +++ L D INIQFTSGTTG+PK A LTH+N++NN
Sbjct: 174 GMWTWAEFIGFAGDVSQEELDKVQDQLQFDDPINIQFTSGTTGNPKGATLTHHNILNNGY 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + D ++++ VP++H FG MG L + HGST + P F+P L+A+ +E
Sbjct: 234 FVAESQLLTEKD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPGEGFEPKSVLQAVHQE 292
Query: 182 KC 183
K
Sbjct: 293 KA 294
>gi|355571892|ref|ZP_09043100.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
gi|354824988|gb|EHF09223.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+SL+ D +NIQ+TSGTTG PK L+H++++NN N IG + F + D ++ + VP +H
Sbjct: 196 ESLSFDDAVNIQYTSGTTGFPKGVVLSHHSIVNNGNIIGDGMNFTEKD-RLCIPVPFYHC 254
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + L M HGST V+P P+F + L+ I KE+C
Sbjct: 255 FGMVLSNLACMTHGSTMVLPGPTFNAGEVLQCIEKERC 292
>gi|402564913|ref|YP_006614258.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
gi|402246110|gb|AFQ46564.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
Length = 575
Score = 99.4 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G R + I +L D INIQFTSGTTG PK A LTH N++NN+
Sbjct: 185 GMFRFADVMARGRDTLDVARLDAIGATLAATDPINIQFTSGTTGSPKGATLTHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A
Sbjct: 245 RSIAMAMRFTEQD-SLCIPVPLYHCFGMVLAVLACVSKGTAMVFPGEAFDPVATLAAVAD 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|395008921|ref|ZP_10392512.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394313051|gb|EJE50135.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 575
Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R SD++ G R +++ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 185 GLLRFSDLL-ARGDVADARVAEVAAGLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 243
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HG+T V P F P+ L+A+ E
Sbjct: 244 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGATIVYPNDGFDPLTVLQAVQDE 302
Query: 182 KC 183
+C
Sbjct: 303 RC 304
>gi|420865927|ref|ZP_15329316.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|420870721|ref|ZP_15334103.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|420875166|ref|ZP_15338542.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|420989866|ref|ZP_15453022.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|421041581|ref|ZP_15504589.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|421045520|ref|ZP_15508520.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
gi|392064643|gb|EIT90492.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|392066641|gb|EIT92489.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|392070191|gb|EIT96038.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|392184145|gb|EIV09796.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|392222509|gb|EIV48032.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|392234973|gb|EIV60471.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
Length = 546
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + +GT ++++ GA L+ D INIQ+TSGTTG+PK A L+H N
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTEAALRARMSRLSNTDPINIQYTSGTTGYPKGATLSHRN 204
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P +L
Sbjct: 205 VLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRTL 263
Query: 176 RAIAKEKCM 184
AI +E+C+
Sbjct: 264 EAIERERCV 272
>gi|372269916|ref|ZP_09505964.1| AMP-binding domain protein [Marinobacterium stanieri S30]
Length = 562
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R +D+M+ A + + +L + INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 174 GMWRWADMMEQAEQTPEKDLADLQATLQFDEAINIQYTSGTTGFPKGATLSHHNILNNGF 233
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L + HG+T + P F+P L+A+ +
Sbjct: 234 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCVTHGATMIYPDEGFEPTSVLKAVHSQ 292
Query: 182 K 182
K
Sbjct: 293 K 293
>gi|424922517|ref|ZP_18345878.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
gi|404303677|gb|EJZ57639.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
Length = 565
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ PE R R S SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLASSVSPEQLRER---SDSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +D ++++ VP++H FG MG L + H ST + P +F P+ +L+ +A+E+
Sbjct: 241 ESIGLTPSD-RLVIPVPLYHCFGMVMGNLGCITHASTMIYPNDAFDPLLTLQTVAEEQ 297
>gi|389875794|ref|YP_006373529.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
gi|388530749|gb|AFK55945.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
Length = 557
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ I +L D INIQFTSGTTG PK A LTH N++NN F+G+ + F + D ++ + VP
Sbjct: 190 DAIIPTLRPDDPINIQFTSGTTGSPKGATLTHNNILNNGLFVGRIMGFTEAD-RLCIPVP 248
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG + +L + HG+T V P+ +F+P +L A+ E+C
Sbjct: 249 LYHCFGMVLSVLACITHGATMVFPSEAFEPRATLEAVQAERC 290
>gi|407364067|ref|ZP_11110599.1| AMP-binding domain protein [Pseudomonas mandelii JR-1]
Length = 565
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L D+ E+ R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLGDLAASVSAEHLRERQ---DSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAHD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLTTVAEEK 297
>gi|410620071|ref|ZP_11330954.1| fatty-acyl-CoA synthase [Glaciecola polaris LMG 21857]
gi|410160407|dbj|GAC35092.1| fatty-acyl-CoA synthase [Glaciecola polaris LMG 21857]
Length = 562
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + + GP + + I L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYAQVTKMGGPAEQEKLKSIVGLLLPDDPINIQFTSGTTGQPKGATLTHCNILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ + D K+ + VP++H FG +G L+ + HG+T V P +F P+ +L+ + KE
Sbjct: 233 LAGEGMRLTPPD-KVCIPVPLYHCFGMVLGNLSCIAHGATMVYPNDAFDPLTTLQVVEKE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|409425835|ref|ZP_11260412.1| AMP-binding domain protein [Pseudomonas sp. HYS]
Length = 557
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
RL+++ P + R+Q SL +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 178 RLAELASETEPAEFQARQQ---SLQFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 234
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D+ D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+E+
Sbjct: 235 ESLGLDEHD-RMVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSCVAEEQ 291
>gi|400596215|gb|EJP63991.1| AMP-binding enzyme [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D+++ A + H + + + ++ +N+QFTSGTTG PKAA LTH+NL+NNS FIG R+
Sbjct: 179 DLIESAMGKSHEKLYEAMRRVSPHQVVNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRM 238
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D + P+FH FG +G+L + HG V PA F +LRAI+ E C
Sbjct: 239 RLTSAD-VLCCPPPLFHCFGLVLGLLAIVTHGGKIVYPAEVFDIAATLRAISDENC 293
>gi|452879218|ref|ZP_21956348.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
gi|452184192|gb|EME11210.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
Length = 373
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
Q SL + INIQ+TSGTTG PK A L+HYN++NN +G+ L D ++++ VP+
Sbjct: 5 QRQASLQFDEPINIQYTSGTTGFPKGATLSHYNILNNGYLVGESLGLSTQD-RLVIPVPL 63
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L + HGST + PAPSF +L A+A+E+
Sbjct: 64 YHCFGMVMGNLGCVTHGSTMIYPAPSFDAEATLLAVAEERA 104
>gi|317486427|ref|ZP_07945254.1| AMP-binding enzyme [Bilophila wadsworthia 3_1_6]
gi|316922337|gb|EFV43596.1| AMP-binding enzyme [Bilophila wadsworthia 3_1_6]
Length = 564
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + L ++ AG E S++ D +N+Q+TSGTTG PK LTH N++NN
Sbjct: 163 GMYSLPELFSLAGDVSDEEYESRKASISPYDVVNMQYTSGTTGFPKGVMLTHVNIVNNGY 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG +F D ++ L VP+FH FG +G++ +NHG+T V+ +F P+ + A+ +E
Sbjct: 223 WIGYHQKFSSRD-RVCLPVPLFHCFGCVLGVMACVNHGATMVL-LDAFSPVQVMTAVEQE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|238491152|ref|XP_002376813.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus flavus
NRRL3357]
gi|220697226|gb|EED53567.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus flavus
NRRL3357]
Length = 606
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 234 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMDLTSFD-ILCCPPPLFHCFGLVLG 292
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P+ +F P L AI+ EKC
Sbjct: 293 MLAVVTHGAKIVFPSETFDPKSVLHAISDEKC 324
>gi|441505167|ref|ZP_20987157.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427268|gb|ELR64740.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 571
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E ++ SL+C + INIQ+TSGTTG PKA LTH+N++NN+ F K + F + D ++ + VP
Sbjct: 202 EAVTTSLDCDEPINIQYTSGTTGFPKAVVLTHHNILNNAYFSAKAMHFTEQD-RLCVPVP 260
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG + L + G+ V+PA F P L+AI EKC
Sbjct: 261 FYHCFGMVLANLLCFSVGACIVIPAEHFDPKAVLKAIDSEKC 302
>gi|391865770|gb|EIT75049.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Aspergillus
oryzae 3.042]
Length = 607
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 234 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMDLTSFD-ILCCPPPLFHCFGLVLG 292
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P+ +F P L AI+ EKC
Sbjct: 293 MLAVVTHGAKIVFPSETFDPKSVLHAISDEKC 324
>gi|51244407|ref|YP_064291.1| AMP-binding domain protein [Desulfotalea psychrophila LSv54]
gi|50875444|emb|CAG35284.1| probable long chain fatty acid-CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 572
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 56 RLALRMGTFRLSDIMQ-----GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAF 110
R +RMG + +I+ G E H + I L+ D +NIQFTSGTTG K A
Sbjct: 176 RFVIRMGNELIGNILSLQKIIADGEESHYPLDDILPLLHRDDPVNIQFTSGTTGQAKGAT 235
Query: 111 LTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK 170
L+H+N++NN++ + R+ F D ++ L VP++H FG +G+L ++ G++ V PA F
Sbjct: 236 LSHFNILNNASNVTARMNFGPGD-RLCLPVPLYHCFGMVLGVLGCLSKGASIVFPAERFT 294
Query: 171 PMDSLRAIAKEKC 183
P +L+ I +E C
Sbjct: 295 PKTTLKVIEQEAC 307
>gi|398961392|ref|ZP_10678700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
gi|398152596|gb|EJM41112.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
Length = 565
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ PE R R S SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLASSVSPEQLRER---SDSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + +D ++++ VP++H FG MG L + H ST + P +F P+ +L+ +A+E+
Sbjct: 241 ESIGLTPSD-RLVIPVPLYHCFGMVMGNLGCITHASTMIYPNDAFDPLLTLQTVAEEQ 297
>gi|86159431|ref|YP_466216.1| AMP-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775942|gb|ABC82779.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 546
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + L + INIQ+TSGTTG PK A L+H+NL+NN FIG+ L + + D ++ L VP
Sbjct: 173 RLERDLQFDEPINIQYTSGTTGFPKGATLSHHNLLNNGFFIGEYLGYREAD-RVCLPVPF 231
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L A +HGS V+P +F P+ +R + +E+C
Sbjct: 232 YHCFGMVIGNLAATSHGSAIVIPLDNFDPVTVMRTVQQERC 272
>gi|345888183|ref|ZP_08839295.1| hypothetical protein HMPREF0178_02069 [Bilophila sp. 4_1_30]
gi|345041003|gb|EGW45207.1| hypothetical protein HMPREF0178_02069 [Bilophila sp. 4_1_30]
Length = 564
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + L ++ AG E S++ D +N+Q+TSGTTG PK LTH N++NN
Sbjct: 163 GMYSLPELFSLAGDVSDEEYESRKASISPYDVVNMQYTSGTTGFPKGVMLTHVNIVNNGY 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG +F D ++ L VP+FH FG +G++ +NHG+T V+ +F P+ + A+ +E
Sbjct: 223 WIGYHQKFSSRD-RVCLPVPLFHCFGCVLGVMACVNHGATMVL-LDAFSPVQVMTAVEQE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|83768930|dbj|BAE59067.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 606
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 234 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMDLTSFD-ILCCPPPLFHCFGLVLG 292
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P+ +F P L AI+ EKC
Sbjct: 293 MLAVVTHGAKIVFPSETFDPKSVLHAISDEKC 324
>gi|414168197|ref|ZP_11424401.1| hypothetical protein HMPREF9696_02256 [Afipia clevelandensis ATCC
49720]
gi|410888240|gb|EKS36044.1| hypothetical protein HMPREF9696_02256 [Afipia clevelandensis ATCC
49720]
Length = 562
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+IS L D INIQFTSGTTG PK A LTH+N++NN F G + D ++ + VP
Sbjct: 193 EISSRLQFDDAINIQFTSGTTGAPKGATLTHHNILNNGYFAGVAMGLTPQD-RLCIPVPF 251
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG + L + HGST VVP +F P++ L+ I E+C
Sbjct: 252 YHCFGMVLSNLACVAHGSTMVVPGAAFDPLEVLKTIEAERC 292
>gi|298245487|ref|ZP_06969293.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552968|gb|EFH86833.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 582
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Query: 79 RRREQI--------SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD 130
+R EQ+ ++L D IN+Q+TSGTTG PK A L+H+N++NN F+ + F
Sbjct: 197 KRAEQVGIDQLYARQRTLEFDDPINVQYTSGTTGFPKGATLSHHNILNNGYFVARLQNFT 256
Query: 131 KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D K+ + VP++H FG MG L + HG+T V P+ SF P+ L+A+ +E+C
Sbjct: 257 HED-KLCIPVPLYHCFGMVMGNLGCVTHGATMVYPSESFDPLAVLQAVQEEQC 308
>gi|120599150|ref|YP_963724.1| AMP-binding protein [Shewanella sp. W3-18-1]
gi|120559243|gb|ABM25170.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 570
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E I+K L+ D INIQFTSGTTG PK A L+H+N++NN + + ++F D K+ + VP
Sbjct: 202 ESIAKELSPYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHD-KLCIPVP 260
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L + G+ V P SF P+ +L+ I +E+C
Sbjct: 261 LYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQVIEQERC 302
>gi|91785731|ref|YP_560937.1| AMP-binding protein [Burkholderia xenovorans LB400]
gi|91689685|gb|ABE32885.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia xenovorans
LB400]
Length = 576
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQ-GAGPEYHRRREQISKSLNCRDGI 94
P A LP R +RM G SD+++ G + I +L+CRD I
Sbjct: 162 PGELHASRLPE--LRYVIRMCDTETPGMLSFSDVIEEGRASLDVPTLDAIGATLSCRDPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEQD-GLCIPVPLYHCFGMVLSVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P F P SL A+A+E+C
Sbjct: 279 CVSVGANMVFPGEGFDPAASLAAVAEEQC 307
>gi|399545625|ref|YP_006558933.1| acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
gi|399160957|gb|AFP31520.1| Putative acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
Length = 543
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++ + A + ++I L D INIQFTSGTTG PK A LTH+N++NN
Sbjct: 155 GMWSWAEFIGFADQVDQKNVDKIQSQLQFDDPINIQFTSGTTGSPKGAALTHHNILNNGF 214
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++++ VP++H FG MG L + HGST + P F+P L+A+ +E
Sbjct: 215 FVGESQRLSEKD-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPGEGFEPKAVLQAVHQE 273
Query: 182 KC 183
K
Sbjct: 274 KA 275
>gi|312136259|ref|YP_004003596.1| amp-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
gi|311223978|gb|ADP76834.1| AMP-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
Length = 552
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
+ E+ K + D +NIQ+TSGTTG PK LTH N++NN +IG+R +F + D K+ L
Sbjct: 177 EKLEKAKKQVKNDDVVNIQYTSGTTGFPKGVMLTHRNILNNGYYIGERQKFTEKD-KLCL 235
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VPMFH FG +G+L + HG T V+ F P+ L A+ KEKC
Sbjct: 236 PVPMFHCFGIVLGLLAILTHGGTLVM-LEYFDPLLVLAAVEKEKC 279
>gi|317145787|ref|XP_001821069.2| long-chain-fatty-acid-CoA ligase [Aspergillus oryzae RIB40]
Length = 585
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 213 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMDLTSFD-ILCCPPPLFHCFGLVLG 271
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P+ +F P L AI+ EKC
Sbjct: 272 MLAVVTHGAKIVFPSETFDPKSVLHAISDEKC 303
>gi|398841820|ref|ZP_10599027.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
gi|398107306|gb|EJL97309.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
Length = 564
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLTDLAASVSVEQLRERQ---DSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAND-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|365872354|ref|ZP_09411892.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|421051469|ref|ZP_15514463.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363993499|gb|EHM14722.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392240072|gb|EIV65565.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898]
Length = 546
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 56 RLALRMGTFRLSDIMQGAG----PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFL 111
R + +GT ++++ GA R Q+S + D INIQ+TSGTTG+PK A L
Sbjct: 145 RDVVFIGTSDWTELVAGAERVTEAALRARMSQLSNA----DPINIQYTSGTTGYPKGATL 200
Query: 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
+H N++NN F+ + ++ D ++ + VP +H FG MG L HG+T V+PAP F P
Sbjct: 201 SHRNVLNNGFFVAESIQLQAGD-RLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDP 259
Query: 172 MDSLRAIAKEKCM 184
+L AI E+C+
Sbjct: 260 GRTLEAIETERCV 272
>gi|398906734|ref|ZP_10653576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
gi|398172501|gb|EJM60362.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
Length = 565
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLTDLAASVSVEQLRERQ---DSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAND-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|169826483|ref|YP_001696641.1| acyl-CoA synthase [Lysinibacillus sphaericus C3-41]
gi|168990971|gb|ACA38511.1| acyl-CoA synthase [Lysinibacillus sphaericus C3-41]
Length = 544
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G SD++ A + EQ +SL+ D INIQ+TSGTTG PK LTH+NL+NN+
Sbjct: 161 GVLNWSDVVAAANQVTEEQLEQREQSLHYNDVINIQYTSGTTGFPKGVMLTHFNLVNNAV 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + + D ++ + VP FH FG +G L A+ T+VP F P + LR + +E
Sbjct: 221 NIAECMRLTAED-RLCIPVPFFHCFGCVIGTL-AITTSGGTMVPVQEFSPQEVLRTVQQE 278
Query: 182 KC 183
KC
Sbjct: 279 KC 280
>gi|24373535|ref|NP_717578.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
gi|24347847|gb|AAN55022.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
Length = 578
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 46 KADALPTKLTRLALRMGT------FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFT 99
+A ALP + +RMG D++ + E+I+ L+ D INIQFT
Sbjct: 170 QAKALPE--LQFVIRMGAEKSPGMLNFDDLLVEVSADDKAMLERIANGLSPYDAINIQFT 227
Query: 100 SGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159
SGTTG PK A L+H+N++NN + + ++F D K+ + VP++H FG +G L + G
Sbjct: 228 SGTTGSPKGATLSHHNILNNGYLVAEAMKF-TCDDKLCIPVPLYHCFGMVLGNLVCLAKG 286
Query: 160 STTVVPAPSFKPMDSLRAIAKEKC 183
+ V P SF P+ +L + +E+C
Sbjct: 287 AAAVFPGDSFDPLTTLEVVERERC 310
>gi|397694374|ref|YP_006532255.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|298682215|gb|ADI95281.1| putative acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|397331104|gb|AFO47463.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
Length = 557
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 198 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGS + P+ +F P+ +LRA+ +EK
Sbjct: 257 MVMANLGCMTHGSALIYPSDAFDPLATLRAVVQEK 291
>gi|108801400|ref|YP_641597.1| AMP-binding domain-containing protein [Mycobacterium sp. MCS]
gi|119870553|ref|YP_940505.1| AMP-binding domain-containing protein [Mycobacterium sp. KMS]
gi|108771819|gb|ABG10541.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119696642|gb|ABL93715.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 540
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 47 ADALPTKLTRL--ALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTG 104
D + + TRL + +GT + + +GA + L+ RD +NIQ+TSGTTG
Sbjct: 134 VDEVRARCTRLREVVYLGTDDWAALRRGADAVSVGKLRNCMAELDSRDPVNIQYTSGTTG 193
Query: 105 HPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164
PK A L+H N+ NN F+ + + TD ++ + VP +H FG MG L HG+T V+
Sbjct: 194 FPKGATLSHRNIGNNGFFVTELIGLGPTD-RLCIPVPFYHCFGMVMGNLGCTTHGATMVI 252
Query: 165 PAPSFKPMDSLRAIAKEKC 183
PAP F +L AI KE+C
Sbjct: 253 PAPGFDAGLTLAAIEKERC 271
>gi|219851671|ref|YP_002466103.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
gi|219545930|gb|ACL16380.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
Length = 566
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Query: 62 GTFRLSDIMQGA---GPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN 118
G F ++++++ P+ RE+ SL+ D INIQ+TSGTTG+PK LTH++++N
Sbjct: 172 GMFTMNEVLKKGEVISPDELVEREE---SLDFDDAINIQYTSGTTGYPKGVVLTHHSVMN 228
Query: 119 NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
N FIG+ + F + D ++ + VP +H FG + + ++ HG+T V+P+P+F LRA+
Sbjct: 229 NGFFIGEGMNFTEKD-RLCIPVPFYHCFGMVLSNMASVTHGATMVIPSPAFDSEAVLRAV 287
Query: 179 AKEKC 183
E C
Sbjct: 288 QDEHC 292
>gi|303311531|ref|XP_003065777.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105439|gb|EER23632.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 605
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
RR+E++S S C N+QFTSG+TG+PKAA NLINNS FIG R++F ++D +
Sbjct: 230 QRRQEELSPSDVC----NLQFTSGSTGNPKAAI----NLINNSRFIGDRMDFTQSD-VLC 280
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG+ V P +F P LRAI+ EKC
Sbjct: 281 CPPPLFHCFGLVLGLLACITHGAKIVYPGETFDPEAVLRAISDEKC 326
>gi|121700583|ref|XP_001268556.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus clavatus
NRRL 1]
gi|119396699|gb|EAW07130.1| long-chain-fatty-acid-CoA ligase, putative [Aspergillus clavatus
NRRL 1]
Length = 584
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG +G
Sbjct: 213 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMKLTSFD-ILCCPPPLFHCFGLVLG 271
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HGS + P+ +F P L AI+ EKC
Sbjct: 272 MLAVVTHGSKIIFPSETFDPAAVLHAISDEKC 303
>gi|339326069|ref|YP_004685762.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338166226|gb|AEI77281.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
necator N-1]
Length = 574
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P +A LP R +RMG R +D++ + I+ L+ D IN
Sbjct: 161 PGELQAARLPA--LRCVIRMGDDHTPGMLRYADVIARGTGVARATLDAITAQLDRHDPIN 218
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
+QFTSGTTG PK A LTH N++NN+ FI + F + D K+ + VP +H FG + +L
Sbjct: 219 VQFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQD-KLCIPVPFYHCFGMVLAVLAC 277
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F+P +++A+++E+C
Sbjct: 278 VSSGAAMVFPGQAFEPEATMQAVSEERC 305
>gi|39996205|ref|NP_952156.1| AMP-binding protein [Geobacter sulfurreducens PCA]
gi|409911646|ref|YP_006890111.1| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens KN400]
gi|39982970|gb|AAR34429.1| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens PCA]
gi|307634802|gb|ADI83940.2| acyl-CoA synthetase, AMP-forming [Geobacter sulfurreducens KN400]
Length = 552
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L+ D IN+Q+TSGTTG PK LTH+N+INN IG+ ++F + D ++ + VP F
Sbjct: 183 VEATLDRHDVINMQYTSGTTGFPKGVMLTHFNIINNGFNIGECMKFTEKD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G++ + HG TT+VP F P+ LR I KE+C
Sbjct: 242 HCFGCVLGVMACVTHG-TTMVPVEIFDPLSVLRTIEKERC 280
>gi|347733428|ref|ZP_08866487.1| AMP-binding enzyme family protein [Desulfovibrio sp. A2]
gi|347517789|gb|EGY24975.1| AMP-binding enzyme family protein [Desulfovibrio sp. A2]
Length = 550
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + +IM + + ++L+ D +N+Q+TSGTTG PK LTH N+ NN
Sbjct: 163 GMYSVPEIMSMSAMVSDEEYAERQRALSPHDVVNMQYTSGTTGFPKGVMLTHVNIGNNGY 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IGK F + D ++ L VP+FH FG +G+L A+NHG+ V+ SF PM + ++ +E
Sbjct: 223 WIGKNQHFTEKD-RVCLPVPLFHCFGCVLGVLAAINHGAALVI-LESFSPMHVMASVDQE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|398844830|ref|ZP_10601884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398254189|gb|EJN39292.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 557
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G D+ A H+ + L C D INIQ+TSGTTG PK A L+H N++NN
Sbjct: 172 GFLAWHDLQARAEAVSHQALAERQGQLRCSDPINIQYTSGTTGFPKGATLSHSNILNNGY 231
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+G+ L + D ++++ VP++H FG M L M HGST + P +F + +LRA+A+E
Sbjct: 232 MVGESLGLTEHD-RLVVPVPLYHCFGMVMANLGCMTHGSTLIYPNDAFDALATLRAVAEE 290
Query: 182 K 182
K
Sbjct: 291 K 291
>gi|113867951|ref|YP_726440.1| AMP-binding domain protein [Ralstonia eutropha H16]
gi|113526727|emb|CAJ93072.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Ralstonia
eutropha H16]
Length = 574
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
P +A LP R +RMG R +D++ + I+ L+ D IN
Sbjct: 161 PGELQAARLPA--LRCVIRMGDDHTPGMLRYADVIARGTGVARSTLDAITAQLDRHDPIN 218
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
+QFTSGTTG PK A LTH N++NN+ FI + F + D K+ + VP +H FG + +L
Sbjct: 219 VQFTSGTTGAPKGATLTHRNIVNNARFIAMAMRFSEQD-KLCIPVPFYHCFGMVLAVLAC 277
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F+P +++A+++E+C
Sbjct: 278 VSSGAAMVFPGQAFEPEATMQAVSEERC 305
>gi|115397321|ref|XP_001214252.1| hypothetical protein ATEG_05074 [Aspergillus terreus NIH2624]
gi|114192443|gb|EAU34143.1| hypothetical protein ATEG_05074 [Aspergillus terreus NIH2624]
Length = 584
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R++ D + P+FH FG
Sbjct: 209 LHPEDVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMKLTSFD-TLCCPPPLFHCFG 267
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+L + HG+ V P +F P L A++ EKC
Sbjct: 268 LVLGMLAVVTHGAKIVFPGETFDPQAVLHAVSDEKC 303
>gi|357589271|ref|ZP_09127937.1| AMP-binding domain protein [Corynebacterium nuruki S6-4]
Length = 569
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +SL+ D INIQ+TSGTTG K A LTH+N++NN IG+RL++ D ++++ VP F
Sbjct: 192 VRESLDPHDPINIQYTSGTTGMAKGATLTHHNVLNNGFMIGERLDYTDAD-RVVVPVPFF 250
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
H FG +GIL A+ HG+ T++P P F ++L A
Sbjct: 251 HCFGMVIGILAAVTHGAATIIPGPVFNAENTLEA 284
>gi|346320684|gb|EGX90284.1| long-chain-fatty-acid-CoA ligase, putative [Cordyceps militaris
CM01]
Length = 752
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D+++ A + H R + + ++ +N+QFTSGTTG PKAA LTH+N++NN+ FIG R+
Sbjct: 356 DLIKAAARKNHDRLYEAMRRVSPHQVVNLQFTSGTTGLPKAAMLTHHNIVNNARFIGDRM 415
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D + P+FH FG +G+L + HG V PA F +LRAI+ E C
Sbjct: 416 RLTSAD-VLCCPPPLFHCFGLVLGLLAIITHGGKIVYPAEVFDISATLRAISDESC 470
>gi|435852023|ref|YP_007313609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanomethylovorans hollandica DSM 15978]
gi|433662653|gb|AGB50079.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanomethylovorans hollandica DSM 15978]
Length = 550
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++I +SL+C D +N+Q+TSGTTG PK LTH N++NN IG R +F +D ++ L VP
Sbjct: 180 QRIKQSLDCNDVVNMQYTSGTTGFPKGVMLTHRNILNNGLSIGDRQKF-TSDDRVCLPVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G++ + HG+T V+ + P+ L A+ KEKC
Sbjct: 239 LFHCFGIVLGVMAVLTHGATHVM-LELYDPLMVLAAVQKEKC 279
>gi|239817684|ref|YP_002946594.1| AMP-binding domain-containing protein [Variovorax paradoxus S110]
gi|239804261|gb|ACS21328.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 560
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S+++ +G R K+L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 170 GMQRFSELL-ASGDAADPRVAATQKTLKATDPINIQFTSGTTGFPKGATLTHRNILNNGF 228
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HGS V P F P+ L + E
Sbjct: 229 FIGECMKLTPAD-RLCIPVPLYHCFGMVLGNLACLTHGSAIVYPNDGFDPLTVLETVQAE 287
Query: 182 KC 183
KC
Sbjct: 288 KC 289
>gi|312883733|ref|ZP_07743454.1| AMP-binding domain protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368616|gb|EFP96147.1| AMP-binding domain protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 561
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+S+SL+ INIQFTSGTTG PK A LTH+N++NN+ I +L+ D+ D K+ + VP++
Sbjct: 199 LSRSLHAEQPINIQFTSGTTGSPKGATLTHFNILNNAFSIADKLKMDEHD-KLCIPVPLY 257
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG G L + G+ V+ SF+P+++++A+ EKC
Sbjct: 258 HCFGMVGGNLTCLAAGACVVLSGESFEPLETMKAVESEKC 297
>gi|218131513|ref|ZP_03460317.1| hypothetical protein BACEGG_03132 [Bacteroides eggerthii DSM 20697]
gi|217986445|gb|EEC52782.1| AMP-binding enzyme [Bacteroides eggerthii DSM 20697]
Length = 558
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + S+I+ R E++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 169 GMYNTSEILLLGDNIEDTRLEELKNQVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGF 228
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 229 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFNPLVVLASIHKE 286
Query: 182 KC 183
+C
Sbjct: 287 RC 288
>gi|126650983|ref|ZP_01723194.1| acyl-CoA synthase [Bacillus sp. B14905]
gi|126592184|gb|EAZ86233.1| acyl-CoA synthase [Bacillus sp. B14905]
Length = 544
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G SD++ A + EQ +SL+ D INIQ+TSGTTG PK LTH+NL+NN+
Sbjct: 161 GVLNWSDVVAAADQVTEEQLEQREQSLHYDDVINIQYTSGTTGFPKGVMLTHFNLVNNAV 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + + D ++ + VP FH FG +G L + G T+VP F P + LR + +E
Sbjct: 221 NIAECMRLTAED-RLCIPVPFFHCFGCVIGTLAIITSGG-TMVPVQEFSPEEVLRTVQQE 278
Query: 182 KC 183
KC
Sbjct: 279 KC 280
>gi|197118037|ref|YP_002138464.1| AMP-binding domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087397|gb|ACH38668.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 549
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ K+L+ D IN+Q+TSGTTG PK LTH+NL+NN IG+ + F + D ++ + VP F
Sbjct: 183 VEKTLSVHDVINMQYTSGTTGFPKGVMLTHHNLVNNGFNIGECMRFTEKD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + ++ + HGS T+VP F P+ L+A+ KE+C
Sbjct: 242 HCFGCVLAVMACVTHGS-TMVPVEIFDPLKVLQAVEKERC 280
>gi|399910718|ref|ZP_10779032.1| AMP-binding domain protein [Halomonas sp. KM-1]
Length = 567
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 42 PSAYKADALPTKLTRLALR------MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95
PS + A LP +L R+ G F ++ A +I +L + IN
Sbjct: 156 PSTFSAAKLP-ELKRVVCLDADRALTGMFSWQSMLAHADEVSDEHLAEIQATLQFDEPIN 214
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQ+TSGTTG PK A L+H+N++NN F+ + + F + D ++++ VP++H FG MG L
Sbjct: 215 IQYTSGTTGAPKGATLSHHNILNNGFFVARTMGFSEKD-RLVIPVPLYHCFGMVMGNLGC 273
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ HG+T + P F P +L+A++ EK
Sbjct: 274 VTHGATMIYPGDGFDPEATLKAVSDEK 300
>gi|126667842|ref|ZP_01738808.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627658|gb|EAZ98289.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 543
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + + A + ++I L D INIQFTSGTTG PK A LTH+N++NN
Sbjct: 155 GMWSWDEFIGFADQVDQKSVDKIQSQLQFDDPINIQFTSGTTGSPKGAALTHHNILNNGF 214
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+G+ + D ++++ VP++H FG MG L + HGST + P F+P L+A+ +E
Sbjct: 215 FVGESQRLSEKD-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPGEGFEPKAVLQAVHQE 273
Query: 182 KC 183
K
Sbjct: 274 KA 275
>gi|383451058|ref|YP_005357779.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
gi|380502680|emb|CCG53722.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
Length = 547
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 33/206 (16%)
Query: 10 EKEDRIGESQPFR-ERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGT----F 64
+K DR+G P R E T+ R G AY+ + L + + LRM F
Sbjct: 69 QKGDRVGIWSPNRYEWTILQYATARIGVILVNINPAYRTNELIYVINQSGLRMMVSPLEF 128
Query: 65 RLSD---------------------------IMQGAGPEYHRRREQISKSLNCRDGINIQ 97
+ SD ++Q A + E I S+ + +N+Q
Sbjct: 129 KTSDYKKMLKKAARECSHLEQTIFFEQDWDQLLQLAELVSNEALETIESSVQFDEPVNLQ 188
Query: 98 FTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
+TSGTTG PK L+H+N++NN FIG RL + + D ++ + VP FH FG +G L
Sbjct: 189 YTSGTTGFPKGVTLSHHNILNNGYFIGHRLHYTEKD-RVCIPVPFFHCFGMVIGNLACTT 247
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
HG+ V+P+ SF+ +L+A+ EKC
Sbjct: 248 HGACMVIPSESFEANQALKAVQIEKC 273
>gi|290995879|ref|XP_002680510.1| acyl-CoA synthase [Naegleria gruberi]
gi|284094131|gb|EFC47766.1| acyl-CoA synthase [Naegleria gruberi]
Length = 899
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%)
Query: 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGT 148
NC D +NIQFTSGTTG PK A L+H+N++NNS F+GK + K+ L VP +H FG+
Sbjct: 536 NCNDTLNIQFTSGTTGLPKGAALSHFNIVNNSYFVGKAMNLQTGVDKLALCVPFYHCFGS 595
Query: 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L HG V+ + F P +LRA+ K KC
Sbjct: 596 NLGFLAFSLHGCGIVLSSFGFDPEATLRAVHKYKC 630
>gi|170694322|ref|ZP_02885476.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170140745|gb|EDT08919.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 576
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGI 94
P A LP R +RM G SD++ QG R + I ++L+C + I
Sbjct: 162 PGDLHAARLPE--LRYVIRMCDTETPGMLSFSDLIEQGRATLDVARLDAIGETLSCHEAI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEQD-ALCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F P +L A+ +E+C
Sbjct: 279 CVSVGANMVFPGEAFDPAATLAAVTEEQC 307
>gi|399925994|ref|ZP_10783352.1| AMP-dependent synthetase and ligase [Myroides injenensis M09-0166]
Length = 537
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I S+ + +NIQ+TSGTTG PK LTH+N++NN FIGKRL++ + D ++ + VP +
Sbjct: 174 IEDSVQFSEAVNIQYTSGTTGFPKGVTLTHHNILNNGYFIGKRLKYSEKD-RVCIPVPFY 232
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L +HG+T V+P F +L+ + EKC
Sbjct: 233 HCFGMVIGNLCCTSHGATIVIPNDGFDAEKTLQTVQDEKC 272
>gi|346225270|ref|ZP_08846412.1| AMP-binding domain protein [Anaerophaga thermohalophila DSM 12881]
Length = 548
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E+ + +NC D +N+Q+TSGTTG PK LTHYN++NN +G +++ D + LL VP
Sbjct: 182 EKRKEGVNCHDVVNMQYTSGTTGFPKGVMLTHYNIVNNGQGVGDNMKY-TPDDRALLCVP 240
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG +G+ + HG + V+ F P+ L A+ KEKC
Sbjct: 241 LFHCFGCVLGVCAVITHGVSMVI-TEDFDPLMVLAAVQKEKC 281
>gi|373487663|ref|ZP_09578330.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
gi|372008738|gb|EHP09363.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
Length = 546
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN FIG+RL + + D + L VP +H F
Sbjct: 177 SLQFDDPINIQYTSGTTGFPKGATLSHHNILNNGFFIGERLAYTEKD-RACLPVPFYHCF 235
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G + HG+ VVP +F P L+ + +EKC
Sbjct: 236 GMVLGNMAVTTHGACIVVPGEAFDPGVVLKVVQEEKC 272
>gi|120404962|ref|YP_954791.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119957780|gb|ABM14785.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 1043
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+SL D INIQ+TSGTTG PK A L+H N++NN F+ ++F D ++ + VP +H
Sbjct: 681 RSLTPGDAINIQYTSGTTGSPKGATLSHRNILNNGYFVTDLIDFGPGD-RLCIPVPFYHC 739
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L HG+T V+PA F P +L AI KE C
Sbjct: 740 FGMVMGNLGCTTHGATMVIPAAGFDPAATLAAIEKEHC 777
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
I +TSGTTG PK A LTH NL ++ L D + P+FHT G + +
Sbjct: 160 IMYTSGTTGFPKGAVLTHRNLYLHAFSSIATLGHRSDDDCWMAVAPLFHTAGVSGMLPMF 219
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ G T + P+ F P ++ A+ E+
Sbjct: 220 LTGGKTVIPPSGGFDPDATIAAVVDEQ 246
>gi|339487838|ref|YP_004702366.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838681|gb|AEJ13486.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 602
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG
Sbjct: 243 LRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHD-RLVVPVPLYHCFG 301
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M L M HGST + P +F P+ +LRA+A+EK
Sbjct: 302 MVMANLGCMTHGSTLIYPNDAFDPLATLRAVAEEK 336
>gi|150400181|ref|YP_001323948.1| AMP-binding domain-containing protein [Methanococcus vannielii SB]
gi|150012884|gb|ABR55336.1| AMP-dependent synthetase and ligase [Methanococcus vannielii SB]
Length = 550
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I LN D IN+Q+TSGTTG PK LTH N++NN +IG++ +F + D ++ L VP+
Sbjct: 181 KIKSELNSNDVINMQYTSGTTGFPKGVMLTHKNILNNGFYIGEKQKFTEKD-RLCLPVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G+L + HG T V+ F P+ +L AI KEKC
Sbjct: 240 FHCFGIVLGVLAILTHGGTLVM-LELFDPLLTLAAIQKEKC 279
>gi|436840579|ref|YP_007324957.1| Acyl-CoA synthetase yngI [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169485|emb|CCO22853.1| Acyl-CoA synthetase yngI [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 548
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +S+++ + E+ +L+ D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 163 GMYSMSEVVNLSSVVSDEEFEERQATLDPHDVVNMQYTSGTTGFPKGVQLTHYNIGNNGY 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG+ +F D ++ L VP+FH FG +G+L A+NHG+T V+ F P+ + +I +E
Sbjct: 223 WIGRNQDFQPGD-RLCLPVPLFHCFGCVLGVLAAVNHGTTMVI-LEGFDPLLVMASIDQE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|170731479|ref|YP_001763426.1| AMP-binding domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254246700|ref|ZP_04940021.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|124871476|gb|EAY63192.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|169814721|gb|ACA89304.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 575
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 62 GTFRLSDIM----QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
G FR +D+M Q P + I +L D INIQFTSGTTG PK A LTH N++
Sbjct: 185 GMFRFADVMARGRQAVDPAL---LDAIGAALTANDPINIQFTSGTTGSPKGATLTHRNVV 241
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN+ I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A
Sbjct: 242 NNARSIAMAMRFTEQD-SLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAA 300
Query: 178 IAKEKC 183
+A+E+C
Sbjct: 301 VAEERC 306
>gi|107024489|ref|YP_622816.1| AMP-binding protein [Burkholderia cenocepacia AU 1054]
gi|116688132|ref|YP_833755.1| AMP-binding domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894678|gb|ABF77843.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116646221|gb|ABK06862.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
Length = 575
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 62 GTFRLSDIM----QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
G FR +D+M Q P + I +L D INIQFTSGTTG PK A LTH N++
Sbjct: 185 GMFRFADVMARGRQAVDPAL---LDAIGAALTANDPINIQFTSGTTGSPKGATLTHRNVV 241
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN+ I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A
Sbjct: 242 NNARSIAMAMRFTEQD-SLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAA 300
Query: 178 IAKEKC 183
+A+E+C
Sbjct: 301 VAEERC 306
>gi|399003457|ref|ZP_10706121.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
gi|398122936|gb|EJM12517.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
Length = 564
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLAASVSVEQLRERQ---DSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAHD-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPNDAFDPLLTLTTVAEEK 297
>gi|423096168|ref|ZP_17083964.1| acyl-CoA synthetase [Pseudomonas fluorescens Q2-87]
gi|397885533|gb|EJL02016.1| acyl-CoA synthetase [Pseudomonas fluorescens Q2-87]
Length = 565
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ +NIQ+TSGTTG PK A L+H N++NN +G+ L D ++++ VP++H F
Sbjct: 203 SLHFDQPVNIQYTSGTTGFPKGATLSHRNILNNGYMVGESLSLTAAD-RLVIPVPLYHCF 261
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G MG L M HGST + PA +F P+ +LR +A+EK
Sbjct: 262 GMVMGNLGCMTHGSTMIYPADAFDPLLTLRVVAEEK 297
>gi|374295349|ref|YP_005045540.1| acyl-CoA synthetase [Clostridium clariflavum DSM 19732]
gi|359824843|gb|AEV67616.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
clariflavum DSM 19732]
Length = 843
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +RR ++SL+ D N+Q+TSGTTG PK LTHYN+INN IG ++ D +
Sbjct: 468 EVYRR----ARSLDKHDVCNMQYTSGTTGFPKGVMLTHYNVINNGKTIGDCMDLSTAD-R 522
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+L+ VPMFH FG + + A+ HGS T+ P P F P SL I KEK
Sbjct: 523 MLIHVPMFHCFGMVLAMTAAVTHGS-TMSPIPYFSPKQSLECITKEK 568
>gi|358381007|gb|EHK18683.1| hypothetical protein TRIVIDRAFT_44194 [Trichoderma virens Gv29-8]
Length = 573
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 48 DALPTKLTRLALRMGTFRLSD--IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGH 105
+A P K+ L G + D + +G+ + R + +SK L +N+QFTSGTTG
Sbjct: 156 EASPIKVVMLRGEGGNYPTYDELVKEGSRQSHERLYKAMSKVLP-HQVVNLQFTSGTTGL 214
Query: 106 PKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165
PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G+L + HG V P
Sbjct: 215 PKAAMLTHHNLVNNSRFIGDRMRLTHVD-VLCCPPPLFHCFGLVLGLLAIVTHGGKIVYP 273
Query: 166 APSFKPMDSLRAIAKEKC 183
A F +L+AI+ E+C
Sbjct: 274 AEVFDIPSTLKAISDEEC 291
>gi|170728362|ref|YP_001762388.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
gi|169813709|gb|ACA88293.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
Length = 558
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 60 RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN 119
R G F ++ E + I + L+ D INIQFTSGTTG PK A LTH +++NN
Sbjct: 174 RSGMFGFDEVSDYCTDELIEKVNSIGQRLSPDDAINIQFTSGTTGEPKGATLTHSSILNN 233
Query: 120 SNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIA 179
+G+++ D K+ + VP++H FG MG L + HG + V P+ SF P+ L AI
Sbjct: 234 GFQVGEKMRL-TYDDKLCIPVPLYHCFGMVMGNLACITHGCSAVFPSDSFDPIACLEAID 292
Query: 180 KEKC 183
+ +C
Sbjct: 293 EYRC 296
>gi|53724018|ref|YP_104464.1| AMP-binding protein [Burkholderia mallei ATCC 23344]
gi|121601336|ref|YP_994632.1| AMP-binding protein [Burkholderia mallei SAVP1]
gi|126448872|ref|YP_001082538.1| AMP-binding protein [Burkholderia mallei NCTC 10247]
gi|167000139|ref|ZP_02265962.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
gi|52427441|gb|AAU48034.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 23344]
gi|121230146|gb|ABM52664.1| AMP-binding enzyme domain protein [Burkholderia mallei SAVP1]
gi|126241742|gb|ABO04835.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10247]
gi|243063942|gb|EES46128.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|349573727|ref|ZP_08885700.1| AMP-binding domain protein [Neisseria shayeganii 871]
gi|348014683|gb|EGY53554.1| AMP-binding domain protein [Neisseria shayeganii 871]
Length = 577
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + SD M + E+++ +L+ D INIQFTSGTTG PK A LTH N++NN
Sbjct: 193 GIDKFSDWMATGDADDPAVAERMA-TLDRHDPINIQFTSGTTGAPKGATLTHRNILNNGF 251
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VPM+H FG +G+L M HG V P F P+ L + +E
Sbjct: 252 FIGEAMYLTHED-RLCIPVPMYHCFGMVLGVLAIMTHGGCIVYPNDGFDPLTVLETVEQE 310
Query: 182 KC 183
KC
Sbjct: 311 KC 312
>gi|307731457|ref|YP_003908681.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
gi|307585992|gb|ADN59390.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQ-GAGPEYHRRREQISKSLNCRDGI 94
P A LP R +RM G SD+++ G + + I+ +L+C + I
Sbjct: 162 PGELHAARLPE--LRYVIRMCDTETPGMLSFSDVIERGRATLDVAKLDAIAATLSCHEPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEQD-ALCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P F P +L A+A+EKC
Sbjct: 279 CVSVGANMVFPGEGFDPAATLAAVAEEKC 307
>gi|134281418|ref|ZP_01768126.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
gi|134247085|gb|EBA47171.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|53721001|ref|YP_109987.1| AMP-binding domain-containing protein [Burkholderia pseudomallei
K96243]
gi|126453323|ref|YP_001068259.1| AMP-binding protein [Burkholderia pseudomallei 1106a]
gi|167847888|ref|ZP_02473396.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167896446|ref|ZP_02483848.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167904847|ref|ZP_02492052.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167913125|ref|ZP_02500216.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|242318046|ref|ZP_04817062.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|386863694|ref|YP_006276643.1| AMP-binding protein [Burkholderia pseudomallei 1026b]
gi|418394740|ref|ZP_12968837.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|418537313|ref|ZP_13102953.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|418554847|ref|ZP_13119609.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|52211415|emb|CAH37406.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
pseudomallei K96243]
gi|126226965|gb|ABN90505.1| AMP-binding domain protein [Burkholderia pseudomallei 1106a]
gi|242141285|gb|EES27687.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|385350022|gb|EIF56574.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|385369739|gb|EIF75049.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|385374682|gb|EIF79520.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|385660822|gb|AFI68245.1| AMP-binding domain protein [Burkholderia pseudomallei 1026b]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|257454741|ref|ZP_05619995.1| acyl-CoA synthetase family member 2 [Enhydrobacter aerosaccus SK60]
gi|257447861|gb|EEV22850.1| acyl-CoA synthetase family member 2 [Enhydrobacter aerosaccus SK60]
Length = 624
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+K LN + INIQFTSGTTG PK A LTH N++NN FIG+ + F D ++ + VP++H
Sbjct: 263 AKKLNPNNPINIQFTSGTTGTPKGATLTHRNILNNGYFIGEAMSF-TADDRLCIPVPLYH 321
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G L + HG T V P F P+ L + EKC
Sbjct: 322 CFGMVLGNLAILTHGGTIVYPNDGFDPITVLETVQNEKC 360
>gi|167721819|ref|ZP_02405055.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|126438681|ref|YP_001060959.1| AMP-binding protein [Burkholderia pseudomallei 668]
gi|126218174|gb|ABN81680.1| AMP-binding domain protein [Burkholderia pseudomallei 668]
Length = 576
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|120402570|ref|YP_952399.1| AMP-binding domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955388|gb|ABM12393.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 538
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
S SL+ D +NIQ+TSGTTG PK A L+H N++NN F+ +++ D ++ + VP +H
Sbjct: 175 SASLSHHDPVNIQYTSGTTGFPKGATLSHRNILNNGFFVTEQIRLGPGD-RLCIPVPFYH 233
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L HG+T V+PAP F P +L+ I E+C
Sbjct: 234 CFGMVMGNLGCTTHGATMVIPAPGFDPGQTLKTIETERC 272
>gi|218887445|ref|YP_002436766.1| AMP-binding protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758399|gb|ACL09298.1| AMP-dependent synthetase and ligase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 550
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
EY R+ ++L+ D +N+Q+TSGTTG PK LTH N+ NN +IGK F + D +
Sbjct: 181 EYAERQ----RALDPHDVVNMQYTSGTTGFPKGVMLTHVNIGNNGYWIGKNQHFTEKD-R 235
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G+L A+NHG+ V+ SF PM + ++ +EKC
Sbjct: 236 VCLPVPLFHCFGCVLGVLAAINHGAALVI-LESFSPMHVMASVDQEKC 282
>gi|423696441|ref|ZP_17670931.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
gi|388003967|gb|EIK65294.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
Length = 565
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + PE R+ SL +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 184 QLAALGAAVTPEQLAERQ---SSLRSDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L M HGST + P+ +F P+ +L+A+A+EK
Sbjct: 241 ESLGLTAGD-RLVIPVPLYHCFGMVMGNLGCMTHGSTMIYPSDAFDPLLTLKAVAEEK 297
>gi|206558442|ref|YP_002229202.1| AMP-binding domain-containing [Burkholderia cenocepacia J2315]
gi|421866790|ref|ZP_16298453.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|444365685|ref|ZP_21165807.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
gi|198034479|emb|CAR50344.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
cenocepacia J2315]
gi|358073275|emb|CCE49331.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|443605797|gb|ELT73621.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
Length = 575
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G + I +L+ D INIQFTSGTTG PK A LTH N++NN+
Sbjct: 185 GMFRFADVMARGRRAVDPALLDAIGATLSANDPINIQFTSGTTGSPKGATLTHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A+
Sbjct: 245 RSIAMAMRFTEQD-SLCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEAFDPVATLAAVAE 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|330808606|ref|YP_004353068.1| long-chain-fatty-acid--CoA ligase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376714|gb|AEA68064.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 565
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + PE R+ SL +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 184 QLAALGAAVTPEQLAERQ---SSLRSDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L M HGST + P+ +F P+ +L+A+A+EK
Sbjct: 241 ESLGLTAGD-RLVIPVPLYHCFGMVMGNLGCMTHGSTMIYPSDAFDPLLTLKAVAEEK 297
>gi|340500544|gb|EGR27412.1| hypothetical protein IMG5_195940 [Ichthyophthirius multifiliis]
Length = 496
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 69 IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE 128
+MQ E + +I K+ + D NIQFTSGTTG PK A LTH+N++NN +I RL
Sbjct: 104 LMQIPKKEDFSKINKILKNTSPDDITNIQFTSGTTGRPKGASLTHFNILNNGYYIADRLG 163
Query: 129 FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D KI L VP++H FG +G L A+N G+T V+ + F +L AI K KC
Sbjct: 164 LNSQD-KICLSVPLYHCFGMVIGNLCALNFGATIVINSEGFSAQKTLEAITKYKC 217
>gi|170028419|ref|XP_001842093.1| 2-succinylbenzoate-CoA ligase [Culex quinquefasciatus]
gi|167874248|gb|EDS37631.1| 2-succinylbenzoate-CoA ligase [Culex quinquefasciatus]
Length = 574
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E I + G + FTSGTTG PKAA L+H+ LIN+S I +R + + H+ + +P
Sbjct: 205 ESIQSRICPDSGACLLFTSGTTGKPKAALLSHFALINHSVTIAERNDLGRKMHRACVHIP 264
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH +G + G+L+A+++G+T V+P F DSL AIA+EKC
Sbjct: 265 LFHVYGLSFGVLSALSYGTTAVLPGYWFNASDSLNAIAREKC 306
>gi|398991917|ref|ZP_10694998.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
gi|399015364|ref|ZP_10717637.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398108615|gb|EJL98568.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398136210|gb|EJM25304.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
Length = 565
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
L+D+ PE R S SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 ELADLAASLSPEQLHER---SNSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ + D ++++ VP++H FG MG L + HGST + P +F P+ +L+ +A+EK
Sbjct: 241 ESIGLTPRD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLQTVAEEK 297
>gi|317476469|ref|ZP_07935718.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316907495|gb|EFV29200.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 548
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + S+I+ R E++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 159 GMYNTSEILLLGDNIEDTRLEELKNRVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGF 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 219 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFNPLVVLASIHKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|184201926|ref|YP_001856133.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183582156|dbj|BAG30627.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 540
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ L+ D +NIQ+TSGTTG PK A L+H N++NN FIG+ L + D +I++
Sbjct: 170 RLASVATGLHADDAVNIQYTSGTTGRPKGATLSHRNILNNGYFIGELLHYTAED-RIVVV 228
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P++H FG +G L A +HG ++ P F P +LRA+A+E+
Sbjct: 229 PPLYHCFGMVIGNLAATSHGCAIILSGPGFDPRAALRAVAQERA 272
>gi|338999710|ref|ZP_08638348.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338763390|gb|EGP18384.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 567
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R D +Q A + + +L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 177 GMWRWEDFIQEANKVSQTDVDDLQATLQFDDPINIQYTSGTTGFPKGATLSHHNILNNGF 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L M HG+ + P F P L+A+ ++
Sbjct: 237 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCMTHGAAMIYPDEGFDPGKVLKAVHEQ 295
Query: 182 K 182
K
Sbjct: 296 K 296
>gi|334343335|ref|YP_004555939.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334104010|gb|AEG51433.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 544
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150
RD +NIQFTSGTTG PK L+H N++NN +G R D ++ + VP++H FG M
Sbjct: 190 RDPVNIQFTSGTTGRPKGVTLSHRNILNNGAAVGVRAGLRAGD-RLCIPVPLYHCFGMVM 248
Query: 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G L + HG V PAP F P+ SLRAI E+C
Sbjct: 249 GNLACVTHGVAMVYPAPGFDPVASLRAIEGERC 281
>gi|237814343|ref|YP_002898794.1| AMP-binding domain protein [Burkholderia pseudomallei MSHR346]
gi|237505976|gb|ACQ98294.1| acyl-CoA synthetase family member 2 [Burkholderia pseudomallei
MSHR346]
Length = 576
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGARMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|255957175|ref|XP_002569340.1| Pc21g23730 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591051|emb|CAP97270.1| Pc21g23730 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 584
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG+PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G
Sbjct: 215 DVCNLQFTSGSTGNPKAAMLTHHNLVNNSRFIGDRMNLTSFD-VLCCPPPLFHCFGLVLG 273
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ V P+ +F P L AI+ EKC
Sbjct: 274 MLAVVTHGAKIVFPSETFDPKAVLHAISDEKC 305
>gi|358396193|gb|EHK45574.1| long-chain-fatty-acid--CoA ligase [Trichoderma atroviride IMI
206040]
Length = 574
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 48 DALPTKLTRLALRMGTFRLSDIMQGAGP-EYHRRREQISKSLNCRDGINIQFTSGTTGHP 106
+A P K+ L GT+ D + +G + H R ++ + +N+QFTSGTTG P
Sbjct: 157 EASPIKVVILRGESGTYTTYDELVKSGSRQNHDRLHRVMSKVLPHQVVNLQFTSGTTGLP 216
Query: 107 KAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166
KAA LTH+NL+NNS FIG R+ D + P+FH FG +G+L + HG V A
Sbjct: 217 KAAMLTHHNLVNNSRFIGDRMRLTHED-VLCCPPPLFHCFGLVLGLLAIITHGGKVVYAA 275
Query: 167 PSFKPMDSLRAIAKEKC 183
F +L+AI+ E+C
Sbjct: 276 EVFDIASTLKAISDEEC 292
>gi|76811858|ref|YP_331592.1| AMP-binding protein [Burkholderia pseudomallei 1710b]
gi|167818006|ref|ZP_02449686.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|254258460|ref|ZP_04949514.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|418542357|ref|ZP_13107796.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|418548842|ref|ZP_13113940.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
gi|76581311|gb|ABA50786.1| AMP-binding enzyme domain protein [Burkholderia pseudomallei 1710b]
gi|254217149|gb|EET06533.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|385355749|gb|EIF61910.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|385357060|gb|EIF63139.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
Length = 576
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGARMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|189424453|ref|YP_001951630.1| AMP-binding domain-containing protein [Geobacter lovleyi SZ]
gi|189420712|gb|ACD95110.1| AMP-dependent synthetase and ligase [Geobacter lovleyi SZ]
Length = 549
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L+C D IN+Q+TSGTTG PK LTHYNL NN IG+ ++F D ++ + VP F
Sbjct: 183 VEATLDCHDTINMQYTSGTTGFPKGVMLTHYNLANNGFQIGECMKFTNQD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G + + HGS +VP F P+ L+ I EKC
Sbjct: 242 HCFGCVLGTMVCVTHGS-AMVPVELFDPLKVLQTIEAEKC 280
>gi|371776884|ref|ZP_09483206.1| AMP-binding domain protein [Anaerophaga sp. HS1]
Length = 549
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +R+ ++S C D +N+Q+TSGTTG PK LTH+N++NN IG +++ D +
Sbjct: 182 ELLKRKSEVS----CHDVVNMQYTSGTTGFPKGVMLTHFNIVNNGKGIGDNMQY-TPDDR 236
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+LL VP+FH FG +G+ + HG + V+ F P+ L A+ KEKC
Sbjct: 237 LLLCVPLFHCFGCVLGVCAVITHGVSMVI-TEDFDPLRVLAAVQKEKC 283
>gi|167826369|ref|ZP_02457840.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|226193138|ref|ZP_03788748.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225934738|gb|EEH30715.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 576
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|167740791|ref|ZP_02413565.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|217423840|ref|ZP_03455340.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
gi|217392903|gb|EEC32925.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
Length = 576
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|159045943|ref|YP_001534737.1| acyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
gi|157913703|gb|ABV95136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Dinoroseobacter shibae DFL 12]
Length = 579
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 42 PSAYKADALP----TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQ 97
P A A LP +T G D++ + + I++ L+C D INIQ
Sbjct: 165 PGALHAAELPDLRAVIVTEAEAPDGMIAFPDLIAKGRAVVAKDLDAITRKLDCHDPINIQ 224
Query: 98 FTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
FTSGTTG PK A LTH N++NN+ + ++ + D + + VP +H FG MG L +
Sbjct: 225 FTSGTTGLPKGATLTHRNIVNNAASVTSAIKLIEQD-MLCIPVPFYHCFGMVMGTLGCVT 283
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
G+ VVP P F P+ +L ++K +C
Sbjct: 284 KGAAIVVPGPGFDPITTLDTVSKHRC 309
>gi|357632178|ref|ZP_09130056.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio sp. FW1012B]
gi|357580732|gb|EHJ46065.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio sp. FW1012B]
Length = 557
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+ C D +N+Q+TSGTTG PK L+H+N++NN IG+R F + D K+ +QVP+FH F
Sbjct: 195 TFTCHDVVNMQYTSGTTGFPKGVMLSHHNIVNNGYSIGQRQRFTEKD-KLCIQVPLFHCF 253
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + ++ +NHG TT+V F P+ S+ +I +E+C
Sbjct: 254 GCVLAVMACVNHG-TTMVFTEVFNPVHSMMSIEQEQC 289
>gi|392543499|ref|ZP_10290636.1| AMP-binding domain protein [Pseudoalteromonas piscicida JCM 20779]
Length = 569
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G S ++ A ++ I+ +L+ D INIQFTSGTTG+PK A LTH N++NN
Sbjct: 183 GLMNFSTLLSKANDAHYLEANAIAANLSACDAINIQFTSGTTGNPKGATLTHSNILNNGL 242
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ ++ + D K+ + VP++H FG +G L ++ G+ V P SF P+ +L + +E
Sbjct: 243 LVANAMKLTEQD-KLCIPVPLYHCFGMVLGNLVCISKGACAVFPNDSFDPLITLEVVERE 301
Query: 182 KC 183
KC
Sbjct: 302 KC 303
>gi|407694368|ref|YP_006819156.1| long-chain-fatty-acid-CoA ligase [Alcanivorax dieselolei B5]
gi|407251706|gb|AFT68813.1| Long-chain-fatty-acid-CoA ligase, putative [Alcanivorax dieselolei
B5]
Length = 560
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+Q L D INIQ+TSGTTG PK A L+H N++NN + + + F + D ++++ VP
Sbjct: 191 KQRQAGLKPDDPINIQYTSGTTGFPKGATLSHRNILNNGYMVAESMGFTERD-RLVIPVP 249
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++H FG MG L M HGST + PAP F P +L A+A E+
Sbjct: 250 LYHCFGMVMGNLGCMTHGSTMIYPAPGFDPEATLEAVASER 290
>gi|167838422|ref|ZP_02465281.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424901542|ref|ZP_18325058.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390931917|gb|EIP89317.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 576
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N++NN+
Sbjct: 186 GMLSFADVLARGRAALDSARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNVVNNA 245
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + + + D + + VP++H FG + +L ++ G+ V P +F+P +L A++
Sbjct: 246 RSIARVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGATLAAVSD 304
Query: 181 EKC 183
E+C
Sbjct: 305 ERC 307
>gi|387900866|ref|YP_006331205.1| long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
gi|387575758|gb|AFJ84474.1| Long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
Length = 575
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G R + I +L + INIQFTSGTTG PK A LTH N++NN+
Sbjct: 185 GMFRFADVMARGRDTLDAARLDAIGATLAAGEAINIQFTSGTTGSPKGATLTHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A
Sbjct: 245 RSIAMAMRFTEQD-ALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAAVAD 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|134294240|ref|YP_001117975.1| AMP-binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134137397|gb|ABO53140.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 575
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M +G R + I +L + INIQFTSGTTG PK A LTH N++NN+
Sbjct: 185 GMFRFADVMARGRDTLDAARLDAIGATLAAGEAINIQFTSGTTGSPKGATLTHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A+A
Sbjct: 245 RSIAMAMRFTEQD-ALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAAVAD 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|398857242|ref|ZP_10612943.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398241091|gb|EJN26750.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 568
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L D+ E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLIDLAASVSVEQLRERQ---DSLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAND-RLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|402077581|gb|EJT72930.1| short-chain-fatty-acid-CoA ligase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 581
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
D++Q RR ++ + + N+QFTSGTTG PKAA LTH+NL+NN+ +IG R+
Sbjct: 179 DVIQSGIRFSSRRLQEAQTKVLPYNVCNLQFTSGTTGRPKAAMLTHHNLVNNARYIGDRM 238
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +D + PMFH FG +G+L + HG V PA F +LRA+ +E+C
Sbjct: 239 QLGPSD-ALCCPPPMFHCFGLVLGMLATVTHGGKIVYPAEVFDAEATLRAVREERC 293
>gi|253701173|ref|YP_003022362.1| AMP-binding protein [Geobacter sp. M21]
gi|251776023|gb|ACT18604.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 549
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ K+L+ D IN+Q+TSGTTG PK LTH+N++NN IG+ + F + D ++ + VP F
Sbjct: 183 VEKTLSVHDVINMQYTSGTTGFPKGVMLTHHNVVNNGFNIGECMRFTEKD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + ++ + HGS T+VP F P+ L+A+ KE+C
Sbjct: 242 HCFGCVLAVMACVTHGS-TMVPVEIFDPLKVLQAVEKERC 280
>gi|429335406|ref|ZP_19216036.1| AMP-binding domain protein [Pseudomonas putida CSV86]
gi|428759890|gb|EKX82174.1| AMP-binding domain protein [Pseudomonas putida CSV86]
Length = 557
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+SL +NIQ+TSGTTG PK A L+HYN++NN +G+ L + D ++++ VP++H
Sbjct: 196 QSLQFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTEHD-RMVIPVPLYHC 254
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
FG MG L M HGST + P +F P +L+A+A+E+
Sbjct: 255 FGMVMGNLGCMTHGSTMIYPNDAFDPALTLQAVAEER 291
>gi|209514969|ref|ZP_03263838.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504595|gb|EEA04582.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 564
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L C D +NIQFTSGTTG PK A LTH NL+NNS F+G+ ++ D ++ + VP++H F
Sbjct: 198 TLRCDDPVNIQFTSGTTGAPKGATLTHRNLLNNSFFVGEAMKLTSQD-RLCIPVPLYHCF 256
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L HG+T V+P +F L + EKC
Sbjct: 257 GMVLGNLVCATHGATMVLPGEAFDAKAVLETVEAEKC 293
>gi|145477401|ref|XP_001424723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391789|emb|CAK57325.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 13 DRIGESQPFRERTLSHQDKIRPGRESNP---RPSAYKADALPTKLTRLAL----RMGTFR 65
+++G T H + + +E P +P + +P+ + + + + G F
Sbjct: 120 NKVGCKALVLRSTFKHSNYVNMIKELAPELDQPGHLNSKRIPSLKSTILIDDIHKKGFFN 179
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
++ G + EQ + D NIQFTSGTTG PK A L+H N++NN ++G+
Sbjct: 180 FKELFSLYGSSHLNEVEQRMSKQDPDDITNIQFTSGTTGAPKGACLSHLNILNNGKYVGE 239
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ + + D ++ + VP++H FG MG L +N+GST V P+ F +L A+ KC
Sbjct: 240 RVHYTEKD-RVAIAVPLYHCFGMVMGNLACINYGSTMVYPSDGFSAGATLEAVTNYKC 296
>gi|167921063|ref|ZP_02508154.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
Length = 576
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 58 ALRMGTFRLSDIM-QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL 116
A G +D++ +G R + I +L+CRD INIQFTSGTTG PK A LTH N+
Sbjct: 182 AAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNV 241
Query: 117 INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLR 176
+NN+ I + + D + + VP++H FG + +L ++ G+ V P +F+P +L
Sbjct: 242 VNNARSIANVMRLTEAD-AMCIPVPLYHCFGMVLSVLACVSVGAKMVFPGAAFEPGATLA 300
Query: 177 AIAKEKC 183
A++ E+C
Sbjct: 301 AVSDERC 307
>gi|425783096|gb|EKV20965.1| Long-chain-fatty-acid-CoA ligase, putative [Penicillium digitatum
Pd1]
Length = 584
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G
Sbjct: 215 DVCNLQFTSGSTGSPKAAMLTHHNLVNNSRFIGDRMNLTSFD-ILCCPPPLFHCFGLVLG 273
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ + P+ +F P +L AI+ EKC
Sbjct: 274 MLAVVTHGAKIIFPSETFDPKAALHAISDEKC 305
>gi|71064885|ref|YP_263612.1| AMP-binding protein [Psychrobacter arcticus 273-4]
gi|71037870|gb|AAZ18178.1| putative long-chain fatty acid acyl-CoA ligase [Psychrobacter
arcticus 273-4]
Length = 584
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
P R+ Q+ + D IN+QFTSGTTG PK A L+H N++NN FIG+ + F + D
Sbjct: 217 PRIAERQAQLKNT----DAINVQFTSGTTGTPKGATLSHRNILNNGYFIGEAMNFTEED- 271
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ + VP++H FG +G L + HG V P F+P+ L+A+ EKC
Sbjct: 272 RLCIPVPLYHCFGMVLGNLAILTHGGCIVYPNDGFEPLSVLQAVEAEKC 320
>gi|340931777|gb|EGS19310.1| long-chain fatty-acid-CoA ligase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 583
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
HRR ++ + C N+QFTSGTTG PKAA LTH+N++NNS FIG R+ D +
Sbjct: 194 HRRELKVLPHMVC----NLQFTSGTTGLPKAAMLTHHNIVNNSRFIGDRMRLGP-DDILC 248
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G++ + HG+ V PA F +L+AI +E+C
Sbjct: 249 CPPPLFHCFGLVLGLMAVLTHGAKIVYPAEVFDAKATLKAIIEEQC 294
>gi|383453606|ref|YP_005367595.1| AMP-binding protein [Corallococcus coralloides DSM 2259]
gi|380735082|gb|AFE11084.1| AMP-binding domain protein [Corallococcus coralloides DSM 2259]
Length = 547
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D INIQ+TSGTTG PK A L+H+N++NN F+G+ L + D ++ + VP +H F
Sbjct: 178 SLQFDDPINIQYTSGTTGFPKGATLSHHNVLNNGFFVGEVLRYGPED-RVCIPVPFYHCF 236
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G MG L +HGS V+P +F P+ L+ + E+C
Sbjct: 237 GMVMGNLACTSHGSAMVIPGEAFDPLAVLQTVQAERC 273
>gi|345488226|ref|XP_001605955.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Nasonia vitripennis]
Length = 592
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
+ EQ+ ++ +G NIQFTSGTTG+PKA L+ L+NNS RL+ D KI L
Sbjct: 223 KEEQVE--ISPYNGTNIQFTSGTTGNPKAVLLSQRGLVNNSRQAVTRLDTD--GRKICLN 278
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP FH FG MGI+ ++ GST V+ +P+F P+ S+ AI EKC
Sbjct: 279 VPYFHAFGMVMGIVGPLHAGSTVVLESPTFNPIKSIEAIIAEKC 322
>gi|302900576|ref|XP_003048290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729223|gb|EEU42577.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 575
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 62 GTFRLSDIMQGAG--PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN 119
G ++ D + AG + R +SK L +N+QFTSGTTG PKAA LTH+NL+NN
Sbjct: 172 GKYQTYDDLVSAGRRQNHQRLYRAMSKVLP-HQVVNLQFTSGTTGLPKAAMLTHHNLVNN 230
Query: 120 SNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIA 179
S FIG R+ D + P+FH FG +G+L + HG V PA F +L+AI+
Sbjct: 231 SRFIGDRMRLSSVD-VLCCPPPLFHCFGLVLGLLAIVTHGGKIVYPAEVFDIQATLQAIS 289
Query: 180 KEKC 183
EKC
Sbjct: 290 DEKC 293
>gi|425780859|gb|EKV18855.1| Long-chain-fatty-acid-CoA ligase, putative [Penicillium digitatum
PHI26]
Length = 595
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D N+QFTSG+TG PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G
Sbjct: 215 DVCNLQFTSGSTGSPKAAMLTHHNLVNNSRFIGDRMNLTSFD-ILCCPPPLFHCFGLVLG 273
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L + HG+ + P+ +F P +L AI+ EKC
Sbjct: 274 MLAVVTHGAKIIFPSETFDPKAALHAISDEKC 305
>gi|389730176|ref|ZP_10189351.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
gi|388440948|gb|EIL97268.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
Length = 561
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+ + L D +NIQFTSGTTG PK A LTH+N++NN FIG+ + + D ++ + VP
Sbjct: 194 EAERELGFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEHD-RLCIPVPF 252
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + HG+ V+P F + +L +A EKC
Sbjct: 253 YHCFGMVLGNLACVTHGACMVIPGEGFDALATLETVAAEKC 293
>gi|378951790|ref|YP_005209278.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
gi|359761804|gb|AEV63883.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
Length = 565
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL +NIQ+TSGTTG PK A L+H+N++NN +G+ L D ++++ VP++H F
Sbjct: 203 SLQSDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGL-TADDRLVIPVPLYHCF 261
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G MG L M HGST + P +F P+ +L+A+A+EK
Sbjct: 262 GMVMGNLGCMTHGSTMIYPNDAFDPLLTLKAVAEEK 297
>gi|167582832|ref|ZP_02375706.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 576
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRL----ALRMGTFRLSDIM-QGAGPEYHRRREQIS 85
+I P + P A +P+ T + A G +D++ +G R + I
Sbjct: 151 EIAPELATTPADGTLHAARVPSLRTVVTMGAAAPAGMLSFADVLARGRAALDPARLDAIG 210
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+L+CRD INIQFTSGTTG PK A LTH+N++NN+ I + + D + + VP++H
Sbjct: 211 AALDCRDPINIQFTSGTTGSPKGATLTHHNVVNNACSIASVMRLTEVD-AMCIPVPLYHC 269
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + +L ++ G+ V P +F+P +L A++ E+C
Sbjct: 270 FGMVLSVLACVSVGAKMVFPGEAFEPGATLAAVSDERC 307
>gi|444424341|ref|ZP_21219799.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242336|gb|ELU53850.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 563
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
++ I SL C INIQFTSGTTG PK A LTH+N++NN+ I +L D+ D ++ +
Sbjct: 191 KKVRTICASLRCDQPINIQFTSGTTGSPKGATLTHFNILNNAFSIADKLAMDERD-RLCI 249
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP++H FG G L + G+ ++ SF P+D+L+ I E C
Sbjct: 250 PVPLYHCFGMVGGNLTCLTAGACAILCGESFDPLDTLKTIETESC 294
>gi|340515846|gb|EGR46098.1| predicted protein [Trichoderma reesei QM6a]
Length = 582
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 35 GRESN-PRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGP-EYHRRREQISKSLNCRD 92
GR +N P K +A P K+ L + D + AG + H R ++ +
Sbjct: 151 GRTNNAPLLQNLKNEASPIKVVILRGEGDEYPTYDELVKAGSRQNHDRLYRVMSKVLPHQ 210
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
+N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D + P+FH FG +G+
Sbjct: 211 VVNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRLTHED-VLCCPPPLFHCFGLVLGL 269
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + HG V PA F +LRAI+ E C
Sbjct: 270 LAIVTHGGKIVYPAEVFDIPATLRAISDEDC 300
>gi|224024132|ref|ZP_03642498.1| hypothetical protein BACCOPRO_00854, partial [Bacteroides
coprophilus DSM 18228]
gi|224017354|gb|EEF75366.1| hypothetical protein BACCOPRO_00854 [Bacteroides coprophilus DSM
18228]
Length = 355
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
+ E+ K ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ +
Sbjct: 178 EKLEEAKKKVSCHDTVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCV 236
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 237 CVPLFHCFGVVLATMNCLTHGCTEVM-VERFDPLLVLASIHKERC 280
>gi|416913655|ref|ZP_11931849.1| AMP-binding domain protein, partial [Burkholderia sp. TJI49]
gi|325527930|gb|EGD05171.1| AMP-binding domain protein [Burkholderia sp. TJI49]
Length = 143
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ + +L D INIQFTSGTTG PK A LTH N++NN+ FI + F + D + + VP
Sbjct: 2 DALGATLAATDPINIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFSEQD-ALCIPVP 60
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG + +L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 61 LYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAAVAEERC 102
>gi|388601232|ref|ZP_10159628.1| AMP-binding domain protein [Vibrio campbellii DS40M4]
Length = 563
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
++ I SL C INIQFTSGTTG PK A LTH+N++NN+ I +L D+ D ++ +
Sbjct: 191 KKVRTICASLRCDQPINIQFTSGTTGSPKGATLTHFNVLNNAFSIADKLAMDERD-RLCI 249
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP++H FG G L + G+ ++ SF P+D+L+ I E C
Sbjct: 250 PVPLYHCFGMVGGNLTCLTAGACAILCGESFDPLDTLKTIETESC 294
>gi|228473809|ref|ZP_04058551.1| acyl-CoA synthetase family member 2 [Capnocytophaga gingivalis ATCC
33624]
gi|228274650|gb|EEK13484.1| acyl-CoA synthetase family member 2 [Capnocytophaga gingivalis ATCC
33624]
Length = 542
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN+ FIG R+ + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNAYFIGIRMNYSHVD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF P+ +L + +E+C
Sbjct: 242 NLACTVHGATMVIPNDSFDPVKTLETVERERC 273
>gi|167564616|ref|ZP_02357532.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167571758|ref|ZP_02364632.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 575
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + I +L+CRD INIQFTSGTTG PK A LTH N++NN+ I + + D + +
Sbjct: 204 RLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHRNVVNNARSIASVMRLTEAD-AMCIP 262
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP++H FG + +L M+ G+ V P +F+P +L A++ E+C
Sbjct: 263 VPLYHCFGMVLSVLACMSVGAKMVFPGAAFEPGATLAAVSDERC 306
>gi|148554368|ref|YP_001261950.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148499558|gb|ABQ67812.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 596
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 73 AGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT 132
AGP R E + L RD +NIQFTSGTTG PK L+H N++NN F G +L+
Sbjct: 184 AGPARLRALEGV---LGSRDPVNIQFTSGTTGLPKGVTLSHRNILNNGYFTGLKLKLTAQ 240
Query: 133 DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D +I + VP++H FG MG L A+ HG+ V P F P+ +L A++ E+C
Sbjct: 241 D-RICIPVPLYHCFGMVMGNLAAVTHGAAMVYPGEGFDPLATLAALSGERC 290
>gi|148263636|ref|YP_001230342.1| AMP-binding protein [Geobacter uraniireducens Rf4]
gi|146397136|gb|ABQ25769.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 552
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 38 SNPRPSAYKADALPTKLTRLAL----RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
+ RP +A LP + L G + IM+ + +L+ D
Sbjct: 133 ATSRPGELQAANLPCLKNVVFLGEGSHAGMVDFTGIMELGKDVSDAELAAVESTLDRHDV 192
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
IN+Q+TSGTTG PK LTH+N+INN IG+ + F D ++ + VP FH FG +G++
Sbjct: 193 INMQYTSGTTGFPKGVMLTHFNVINNGFNIGECMRFTDKD-RLCIPVPFFHCFGCVLGVM 251
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGS +VP F P+ L+AI KE+C
Sbjct: 252 ACVTHGS-AMVPVEIFDPLKVLQAIEKERC 280
>gi|395214570|ref|ZP_10400642.1| AMP-binding domain protein [Pontibacter sp. BAB1700]
gi|394456195|gb|EJF10529.1| AMP-binding domain protein [Pontibacter sp. BAB1700]
Length = 433
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L D INIQ+TSGTTG PK A L+H+N++NN FIG+ L++ + D ++ + VP +H F
Sbjct: 178 TLQFDDPINIQYTSGTTGLPKGATLSHHNILNNGFFIGETLKYTEQD-RVCIPVPFYHCF 236
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L + HG+ V+PA +F P ++ + EKC
Sbjct: 237 GMVIGNLACITHGACMVIPAETFDPEQVMQTVQSEKC 273
>gi|302538259|ref|ZP_07290601.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
gi|302447154|gb|EFL18970.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
Length = 545
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG PK A L+H N++NN F+G+ + + D ++ + VP +H FG MG
Sbjct: 188 DPVNIQYTSGTTGFPKGATLSHRNILNNGFFVGELCGYTERD-RVCVPVPFYHCFGMVMG 246
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L +HG+ V+PAP+F P +L A+ E C
Sbjct: 247 ALACTSHGAAMVIPAPAFDPAATLAAVEAEAC 278
>gi|170740558|ref|YP_001769213.1| AMP-binding domain-containing protein [Methylobacterium sp. 4-46]
gi|168194832|gb|ACA16779.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 565
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D +NIQFTSGTTG PK L+H+N++NN +F+G+ + D +I + VP++H FG
Sbjct: 201 LQFDDPVNIQFTSGTTGSPKGVTLSHHNILNNGSFVGRAMRLGPED-RICIPVPLYHCFG 259
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A+ G+ V P F P+ +LRA+ E+C
Sbjct: 260 MVMGNLAAVTSGAAMVYPGEGFDPLATLRAVEAERC 295
>gi|317152262|ref|YP_004120310.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
gi|316942513|gb|ADU61564.1| AMP-dependent synthetase and ligase [Desulfovibrio aespoeensis
Aspo-2]
Length = 546
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D +N+Q+TSGTTG PK LTHYN+ NN +IGK +F K ++ L VP+FH FG
Sbjct: 187 LDPHDVVNMQYTSGTTGFPKGVQLTHYNIANNGYWIGKNQDF-KPGERLCLPVPLFHCFG 245
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+L +NHG T V+ + P+D + A+ +EKC
Sbjct: 246 CVLGVLACVNHGVTMVI-LEDYVPLDVMAAVDQEKC 280
>gi|329956589|ref|ZP_08297162.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
gi|328523961|gb|EGF51037.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
Length = 570
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + S+I+ R +++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 181 GMYNTSEILLLGNNVEDTRLDELKSQVSCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 240
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F +D K+ VP+FH FG + +N + HG T V+ F P+ L ++ KE
Sbjct: 241 LTGEHMKF-TSDDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFNPLVVLASVHKE 298
Query: 182 KC 183
+C
Sbjct: 299 RC 300
>gi|189463135|ref|ZP_03011920.1| hypothetical protein BACCOP_03846 [Bacteroides coprocola DSM 17136]
gi|189430114|gb|EDU99098.1| AMP-binding domain protein [Bacteroides coprocola DSM 17136]
Length = 550
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++ K +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ + VP
Sbjct: 181 DEAKKKVNCHDTVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKFTSAD-KLCVCVP 239
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 LFHCFGVVLATMNCLTHGCTQVM-TERFDPLLVLASIHKERC 280
>gi|121603384|ref|YP_980713.1| AMP-binding domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120592353|gb|ABM35792.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 579
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ P+ R ++ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 189 GLTRFSSLLASGNPD-DARLAALAFTLQATDPINIQFTSGTTGFPKGATLTHRNILNNGF 247
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ ++ D ++ + VP++H FG +G L + HG+T V P F + L+ + E
Sbjct: 248 FIGEAMKLTPAD-RLCIPVPLYHCFGMVLGNLACLTHGATIVYPNDGFDALSVLQTVQDE 306
Query: 182 KC 183
+C
Sbjct: 307 RC 308
>gi|312794897|ref|YP_004027819.1| long-chain-fatty-acid--CoA ligase [Burkholderia rhizoxinica HKI
454]
gi|312166672|emb|CBW73675.1| Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) [Burkholderia
rhizoxinica HKI 454]
Length = 582
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRMGTFRLSDIM-------QGAGPEYHRRREQISKSLNCRDGI 94
P +A LP R +RMG R ++ QG IS +L+ D I
Sbjct: 168 PGELQAARLPE--LRHVIRMGAGRTPGMLCYDDLVQQGRSRLDMAHLAAISGTLDAHDPI 225
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A LTH+N++NN+ FI + + D ++ + VP++H FG + +L
Sbjct: 226 NIQFTSGTTGKPKGATLTHHNIVNNARFIAMSMRLTEQD-RLCIPVPLYHCFGMVLAVLA 284
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P F P +L A++ E+C
Sbjct: 285 CVSTGAAMVFPGEGFDPAATLAAVSDERC 313
>gi|83719308|ref|YP_443798.1| AMP-binding domain-containing protein [Burkholderia thailandensis
E264]
gi|167620972|ref|ZP_02389603.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
gi|83653133|gb|ABC37196.1| AMP-binding enzyme domain protein [Burkholderia thailandensis E264]
Length = 576
Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 31 KIRPGRESNPRPSAYKADALPTKLTRL----ALRMGTFRLSDIM-QGAGPEYHRRREQIS 85
+I P + P A +P+ T + A G +D++ +G R + I
Sbjct: 151 EIAPELATTPADGMLHAARVPSLRTVVTMGAAAPAGMLSFADVLARGRAALDPARLDAIG 210
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+L+CRD INIQFTSGTTG PK A LTH+N++NN+ I + + D + + VP++H
Sbjct: 211 AALDCRDPINIQFTSGTTGSPKGATLTHHNVVNNACSIASVMRLTEVD-AMCIPVPLYHC 269
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + +L ++ G+ V P +F+P +L A++ E+C
Sbjct: 270 FGMVLSVLACVSVGAKMVFPGEAFEPGATLAAVSDERC 307
>gi|333368094|ref|ZP_08460313.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
gi|332977877|gb|EGK14627.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
Length = 579
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
K LN D INIQFTSGTTG PK A LTH NL+NN+ + + L D K+ L +P++H
Sbjct: 217 KQLNANDAINIQFTSGTTGTPKGATLTHRNLLNNAYHLAESLCLSSED-KLCLPLPLYHC 275
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
F +G L ++ G T V P+ SF+P+ L+AI+ E+C
Sbjct: 276 FAMVLGNLTMLSIGGTVVYPSTSFEPLTVLQAISDERC 313
>gi|376297490|ref|YP_005168720.1| AMP-dependent synthetase and ligase [Desulfovibrio desulfuricans
ND132]
gi|323460052|gb|EGB15917.1| AMP-dependent synthetase and ligase [Desulfovibrio desulfuricans
ND132]
Length = 546
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SLN D +N+Q+TSGTTG PK LTHYN++NN +IG +F D ++ L VP+FH F
Sbjct: 186 SLNPFDVVNMQYTSGTTGFPKGVQLTHYNIVNNGYWIGANQKFVPGD-RLCLPVPLFHCF 244
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G++ A+NH + T+V F P+D + AI +E+C
Sbjct: 245 GCVLGVMAAVNH-AVTMVLLEDFVPLDVMAAIDQERC 280
>gi|119718156|ref|YP_925121.1| AMP-binding domain-containing protein [Nocardioides sp. JS614]
gi|119538817|gb|ABL83434.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 539
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG+PK A L+H N++NN F + + D ++ + VP +H FG MG L
Sbjct: 183 INIQYTSGTTGYPKGATLSHRNILNNGYFTTELIHLGPED-RLCIPVPFYHCFGMVMGNL 241
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+T V+PAP F P +LR IA E+C
Sbjct: 242 GCTSHGTTMVIPAPGFDPEITLRTIAAERC 271
>gi|397780243|ref|YP_006544716.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
gi|396938745|emb|CCJ36000.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
Length = 566
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 62 GTFRLSDIMQGAG---PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN 118
G + D++ A P+ R RE+ SL+ D +NIQ+TSGTTG PK LTH+N++N
Sbjct: 172 GMYTWDDLLAKAALISPDELREREE---SLDFDDAVNIQYTSGTTGFPKGVVLTHHNILN 228
Query: 119 NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
N IG ++F D ++ + VP +H FG + + + HG+ ++P+P F LRA+
Sbjct: 229 NGAIIGDGMKFTHKD-RLCIPVPFYHCFGMVLSNMACVTHGAAMILPSPVFNAEAVLRAV 287
Query: 179 AKEKC 183
E+C
Sbjct: 288 QDERC 292
>gi|404497540|ref|YP_006721646.1| AMP-binding protein [Geobacter metallireducens GS-15]
gi|418065117|ref|ZP_12702492.1| AMP-dependent synthetase and ligase [Geobacter metallireducens
RCH3]
gi|78195143|gb|ABB32910.1| acyl-CoA synthetase, AMP-forming [Geobacter metallireducens GS-15]
gi|373562749|gb|EHP88956.1| AMP-dependent synthetase and ligase [Geobacter metallireducens
RCH3]
Length = 552
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ SL+ D IN+Q+TSGTTG PK LTHYNL+NN IG+ ++F D ++ + VP F
Sbjct: 183 VESSLDVHDVINMQYTSGTTGFPKGVMLTHYNLVNNGYHIGECMKFTDKD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG+ + ++ ++ H +T +VP F P+ L+ + KE+C
Sbjct: 242 HCFGSVLAVMASVTH-ATAMVPVEIFDPLKVLQTVEKERC 280
>gi|213962564|ref|ZP_03390826.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
gi|213954890|gb|EEB66210.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
Length = 544
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN+ FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNAYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF +L A+ KEKC
Sbjct: 242 NLACTVHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|389810714|ref|ZP_10205979.1| acyl-CoA synthetase [Rhodanobacter thiooxydans LCS2]
gi|388440574|gb|EIL96936.1| acyl-CoA synthetase [Rhodanobacter thiooxydans LCS2]
Length = 557
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L D +NIQFTSGTTG PK A LTH+N++NN FIG+ + + D ++ + VP +H
Sbjct: 197 RELGFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEHD-RLCIPVPFYHC 255
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G L + HG+ V+P F + +L +A EKC
Sbjct: 256 FGMVLGNLACVTHGACMVIPGEGFDALATLETVAAEKC 293
>gi|70731294|ref|YP_261035.1| AMP-binding protein [Pseudomonas protegens Pf-5]
gi|68345593|gb|AAY93199.1| long-chain-fatty-acid--CoA ligase [Pseudomonas protegens Pf-5]
Length = 567
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+LS + GA E + R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLSALGAGATAEQLQARQ---DSLDFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P +F P+ +L A+A+E+
Sbjct: 241 ESLGLTAAD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPNDAFDPLLTLTAVAEER 297
>gi|374365200|ref|ZP_09623293.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373103335|gb|EHP44363.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 573
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 42 PSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRR------EQISKSLNCRDGIN 95
P A +A LP R +RMG R ++ H + I+ L+ D IN
Sbjct: 161 PGALQAARLPA--LRWVIRMGGERTPGMLNYDALLAHGTHALTGELDAITAQLDRYDPIN 218
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
IQFTSGTTG PK A LTH N++NN FI + F + D K+ + VP +H FG + +L
Sbjct: 219 IQFTSGTTGAPKGATLTHRNIVNNGRFIAMAMRFSEQD-KLCIPVPFYHCFGMVLAVLAC 277
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F+P ++ A+++E+C
Sbjct: 278 VSTGACMVFPGEAFEPAATMAAVSEERC 305
>gi|300783387|ref|YP_003763678.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384146618|ref|YP_005529434.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399535272|ref|YP_006547934.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299792901|gb|ADJ43276.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340524772|gb|AEK39977.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398316042|gb|AFO74989.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 548
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG PK A L+H+N++NN F+G + D ++ + VP +H FG MG
Sbjct: 182 DPINIQYTSGTTGFPKGATLSHHNILNNGYFVGALCGYTPAD-RVCIPVPFYHCFGMVMG 240
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L +HG+T V+PA F P +L A+ +E+C
Sbjct: 241 NLACTSHGATMVIPAQGFDPEATLEAVQRERC 272
>gi|118467988|ref|YP_889882.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399989884|ref|YP_006570234.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
gi|118169275|gb|ABK70171.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
gi|399234446|gb|AFP41939.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
Length = 537
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 77 YHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKI 136
+H R ++ + D INIQ+TSGTTG PK A L+H N++NN F+ + + D ++
Sbjct: 168 FHERMATLANT----DPINIQYTSGTTGFPKGATLSHRNILNNGFFVTELIALGP-DDRL 222
Query: 137 LLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ P +H FG MG L A++HG+T V+PAP F P +L A+ EKC
Sbjct: 223 CIVPPFYHCFGMVMGTLGAVSHGTTIVIPAPGFDPGITLSAVESEKC 269
>gi|389579120|ref|ZP_10169147.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
gi|389400755|gb|EIM62977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
Length = 550
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
EY R++ SL+C D +N+Q+TSGTTG PK LTHYN+ NN +IG D +
Sbjct: 182 EYQARQD----SLDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFWIGANQNLGP-DDR 236
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G++ +NHGS V+ F P+ + ++ +EKC
Sbjct: 237 VCLPVPLFHCFGCVLGVMAFINHGSCMVI-LEKFDPLLIMASVEQEKC 283
>gi|222056632|ref|YP_002538994.1| AMP-binding protein [Geobacter daltonii FRC-32]
gi|221565921|gb|ACM21893.1| AMP-dependent synthetase and ligase [Geobacter daltonii FRC-32]
Length = 550
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L+ D IN+Q+TSGTTG PK LTH+NL+NN IG+ ++F + D ++ + VP F
Sbjct: 183 VESTLDIHDTINMQYTSGTTGFPKGVMLTHHNLVNNGFNIGECMKFTELD-RLCIPVPFF 241
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG+ + ++ ++ HG TT+VP F P+ L+ I KE+C
Sbjct: 242 HCFGSVLAVMASVTHG-TTMVPVELFDPLKVLQTIEKERC 280
>gi|398874629|ref|ZP_10629833.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
gi|398194509|gb|EJM81580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
Length = 565
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ E R R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLAGSVTVEQLRERQ---DSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A EK
Sbjct: 241 ESLGLTAAD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVADEK 297
>gi|332308495|ref|YP_004436346.1| AMP-dependent synthetase and ligase [Glaciecola sp. 4H-3-7+YE-5]
gi|332175824|gb|AEE25078.1| AMP-dependent synthetase and ligase [Glaciecola sp. 4H-3-7+YE-5]
Length = 564
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 62 GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G +D+ Q G E R++ ++ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYADVSQ-MGTEAQRQQLVTLANQLLPDDPINIQFTSGTTGQPKGATLTHCNILNNG 231
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
G+ + +D ++ + VP++H FG +G L+ + HG+T V P +F P+ +L+ + K
Sbjct: 232 FLAGEGMRLSPSD-RVCIPVPLYHCFGMVLGNLSCIAHGATMVYPNDAFDPLTTLQVVEK 290
Query: 181 EKC 183
E+C
Sbjct: 291 ERC 293
>gi|124485231|ref|YP_001029847.1| hypothetical protein Mlab_0404 [Methanocorpusculum labreanum Z]
gi|124362772|gb|ABN06580.1| AMP-dependent synthetase and ligase [Methanocorpusculum labreanum
Z]
Length = 605
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R S++++ E +S++ D +NIQ+TSGTTG PK L+H++++NN
Sbjct: 211 GMYRWSELLEMGEYVSDFELENREESVSFDDALNIQYTSGTTGFPKGVVLSHHSVLNNGL 270
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG + F + D K+ + VP +H FG + + + HGST V+P P F L+A+ E
Sbjct: 271 FIGDGMSFTEND-KLCIPVPFYHCFGMVLSNMACVTHGSTMVIPGPFFDAEAVLQAVEAE 329
Query: 182 KC 183
KC
Sbjct: 330 KC 331
>gi|444305385|ref|ZP_21141168.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
gi|443482303|gb|ELT45215.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
Length = 559
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 67 SDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR 126
+++++GA H L+ D IN+Q+TSGTTG PK A LTH+N++NN IG+
Sbjct: 178 AELLKGADAVAHSALTARMAELDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYAIGEL 237
Query: 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
L + + D ++++ VP +H FG +G LNA++HG+ T++P F P +L A+
Sbjct: 238 LGYTEHD-RVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFSPAAALEAV 288
>gi|410646272|ref|ZP_11356725.1| fatty-acyl-CoA synthase [Glaciecola agarilytica NO2]
gi|410134212|dbj|GAC05124.1| fatty-acyl-CoA synthase [Glaciecola agarilytica NO2]
Length = 564
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 62 GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G +D+ Q G E R++ ++ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYADVSQ-MGTEAQRQQLVTLANQLLPDDPINIQFTSGTTGQPKGATLTHCNILNNG 231
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
G+ + +D ++ + VP++H FG +G L+ + HG+T V P +F P+ +L+ + K
Sbjct: 232 FLAGEGMRLSPSD-RVCIPVPLYHCFGMVLGNLSCIAHGATMVYPNDAFDPLTTLQVVEK 290
Query: 181 EKC 183
E+C
Sbjct: 291 ERC 293
>gi|441215330|ref|ZP_20976558.1| long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis MKD8]
gi|440624839|gb|ELQ86694.1| long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis MKD8]
Length = 537
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQV 140
RE+++ N D INIQ+TSGTTG PK A L+H N++NN F+ + + D ++ +
Sbjct: 169 RERMATLAN-TDPINIQYTSGTTGFPKGATLSHRNILNNGFFVTELIALGP-DDRLCIVP 226
Query: 141 PMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P +H FG MG L A++HG+T V+PAP F P +L A+ EKC
Sbjct: 227 PFYHCFGMVMGTLGAVSHGTTIVIPAPGFDPGITLSAVESEKC 269
>gi|409200096|ref|ZP_11228299.1| AMP-binding domain protein [Pseudoalteromonas flavipulchra JG1]
Length = 584
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G S ++ A ++ I+ +L+ D INIQFTSGTTG+PK A LTH N++NN
Sbjct: 195 GLMNFSTLLSKANDAHYLEANAIAANLSASDAINIQFTSGTTGNPKGATLTHSNILNNGL 254
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ ++ + D K+ + VP++H FG +G L ++ G+ V P SF P+ +L + +E
Sbjct: 255 LVANAMKLTEQD-KLCIPVPLYHCFGMVLGNLVCISKGACAVFPNDSFDPLVTLEVVERE 313
Query: 182 KC 183
KC
Sbjct: 314 KC 315
>gi|407982490|ref|ZP_11163166.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376002|gb|EKF24942.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 562
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 69 IMQGAGPEYHRRREQISKS-----------LNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
I GAG ++ R R ++ L D INIQ+TSGTTG PK A L+H N++
Sbjct: 172 IGAGAGDDWDRLRAAGARVSVDELRARMGVLAPSDPINIQYTSGTTGSPKGAVLSHRNIV 231
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN F+ + + F D ++ L VP +H FG MG L HG+ V+PA F+P +L A
Sbjct: 232 NNGFFVTELIGFGPQD-RLCLPVPFYHCFGMVMGNLGCTTHGAAIVIPAAGFEPAATLTA 290
Query: 178 IAKEKC 183
I E+C
Sbjct: 291 IETERC 296
>gi|386393186|ref|ZP_10077967.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
sp. U5L]
gi|385734064|gb|EIG54262.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
sp. U5L]
Length = 557
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+ C D +N+Q+TSGTTG PK L+H+N++NN IG+R F + D K+ +QVP+FH F
Sbjct: 195 TFTCHDVVNMQYTSGTTGFPKGVMLSHHNIVNNGYSIGQRQRFTEKD-KLCIQVPLFHCF 253
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + ++ +NHG T++V F P+ S+ +I +E+C
Sbjct: 254 GCVLAVMACVNHG-TSMVFTEVFNPVHSMMSIEQEQC 289
>gi|375139821|ref|YP_005000470.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820442|gb|AEV73255.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 541
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+H N++NN F + + F D ++ + VP +H FG MG L
Sbjct: 183 INIQYTSGTTGFPKGATLSHRNILNNGYFTTELINFGP-DDRLCIPVPFYHCFGMVMGNL 241
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG T V+PAP+F P +L AI KE+C
Sbjct: 242 GCTSHGVTMVIPAPAFDPALTLDAIEKERC 271
>gi|393789851|ref|ZP_10377970.1| hypothetical protein HMPREF1068_04250 [Bacteroides nordii
CL02T12C05]
gi|392650254|gb|EIY43925.1| hypothetical protein HMPREF1068_04250 [Bacteroides nordii
CL02T12C05]
Length = 549
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ + Q+ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDEKLNQLKSQVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGY 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L ++ KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASVHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|429746669|ref|ZP_19280005.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429165564|gb|EKY07608.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 542
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF +L A+ KEKC
Sbjct: 242 NLACTVHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|87294989|gb|ABD36907.1| acyl-CoA synthetase [Moraxella osloensis]
Length = 444
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
+K LN + INIQFTSGTTG PK A LTH N++NN FIG+ + D ++ + VP++H
Sbjct: 83 AKKLNPNNPINIQFTSGTTGTPKGATLTHRNILNNGYFIGEAMNL-TADDRLCIPVPLYH 141
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G L + HG T V P F P+ L + KE+C
Sbjct: 142 CFGMVLGNLAILTHGGTIVYPNDGFDPITVLETVQKEQC 180
>gi|430746786|ref|YP_007205915.1| acyl-CoA synthetase [Singulisphaera acidiphila DSM 18658]
gi|430018506|gb|AGA30220.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Singulisphaera acidiphila DSM 18658]
Length = 560
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+S +D NIQFTSGTTG PK A LTH N++ N+ +IG+R+ + D ++ + VP +H
Sbjct: 190 RSARAKDVYNIQFTSGTTGLPKGAMLTHRNVLMNAFYIGERVRYGP-DDRVCVPVPFYHC 248
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G L GS VVPAPSF P +L AI E+C
Sbjct: 249 FGCVLGTLVCALTGSALVVPAPSFDPGLTLAAIDSERC 286
>gi|300776376|ref|ZP_07086234.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
gi|300501886|gb|EFK33026.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
Length = 541
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG PK L+H+N++NN FIG RL++ + D ++ + VP +H FG +G
Sbjct: 181 DPVNIQYTSGTTGFPKGVTLSHHNILNNGYFIGIRLKYTEKD-RVCIPVPFYHCFGMVIG 239
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V+P SF P +L+A+++EKC
Sbjct: 240 NICCTAHGACMVIPNDSFDPEITLKAVSEEKC 271
>gi|325298680|ref|YP_004258597.1| o-succinylbenzoate--CoA ligase [Bacteroides salanitronis DSM 18170]
gi|324318233|gb|ADY36124.1| o-succinylbenzoate--CoA ligase [Bacteroides salanitronis DSM 18170]
Length = 550
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+ K +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F + D K+ + VP+
Sbjct: 182 EAKKRVNCHDTVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKFTQDD-KLCVCVPL 240
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L ++ KE+C
Sbjct: 241 FHCFGVVLATMNCLTHGCTEVM-VERFDPLVVLASVHKERC 280
>gi|387813582|ref|YP_005429064.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338594|emb|CCG94641.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 562
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 42 PSAYKADALPTKLTRLALR----MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQ 97
P KAD +P + + G + D + AG + L D INIQ
Sbjct: 150 PGKLKADNVPDLRAVINVHPDNHEGMWTWQDFLGFAGDVSEADLAKRQDELQFDDPINIQ 209
Query: 98 FTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157
FTSGTTG+PK A LTH+N++NN F+G+ + D ++++ VP++H FG MG L +
Sbjct: 210 FTSGTTGNPKGATLTHHNILNNGYFVGESQRLTEND-RLVIPVPLYHCFGMVMGNLGCIT 268
Query: 158 HGSTTVVPAPSFKPMDSLRAIAKEKC 183
HG+ + P+ F P L+A+ +EK
Sbjct: 269 HGTAMIYPSEGFDPKTVLQAVHQEKA 294
>gi|332662713|ref|YP_004445501.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332331527|gb|AEE48628.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 567
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 62 GTFRLSDIMQGAG---PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN 118
G +R D +Q + PE R+ SL + INIQ+TSGTTG PK A L+H+N++N
Sbjct: 173 GMWRWDDFLQESSKSTPEALAARQ---SSLAFDEAINIQYTSGTTGFPKGATLSHHNILN 229
Query: 119 NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
N F+ + + F + D ++++ VP++H FG MG L + HG+T V P+ F +L A+
Sbjct: 230 NGYFVAELMNFTEKD-RLVIPVPLYHCFGMVMGNLGCVTHGATMVYPSEGFDAASTLAAV 288
Query: 179 AKEK 182
+EK
Sbjct: 289 EREK 292
>gi|134046075|ref|YP_001097561.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C5]
gi|132663700|gb|ABO35346.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C5]
Length = 549
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I K L+ D IN+Q+TSGTTG PK LTH N++NN +IG R +F K D ++ + VP+
Sbjct: 181 RIKKELDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGFYIGDRQKFTKED-RLCITVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + ++ + HG T V+ F P+ L A+ KEKC
Sbjct: 240 FHCFGIVLAVMAILTHGGTMVM-VELFDPLLVLAAVQKEKC 279
>gi|256820840|ref|YP_003142119.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256582423|gb|ACU93558.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 542
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V+P SF +L A+ KEKC
Sbjct: 242 NIACTTHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|429749086|ref|ZP_19282231.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169054|gb|EKY10839.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 543
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN+ FIG R+ + + D ++ + VP +H FG +G
Sbjct: 182 DPVNIQYTSGTTGNPKGVTLSHHNILNNAYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 240
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L +HG+T V+P SF +L A+ KE+C
Sbjct: 241 NLCCTSHGATMVIPNDSFDATRTLEAVEKERC 272
>gi|315224019|ref|ZP_07865860.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|420159021|ref|ZP_14665831.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314945990|gb|EFS97998.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|394762888|gb|EJF45063.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 542
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V+P SF +L A+ KEKC
Sbjct: 242 NIACTTHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|296137156|ref|YP_003644398.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
gi|295797278|gb|ADG32068.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
Length = 567
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+++ +L+ + INIQFTSGTTG PK A LTH N++NN FIG+ ++ D ++ + VP+
Sbjct: 197 EVAATLHAHEPINIQFTSGTTGFPKGATLTHSNILNNGFFIGEAMKLTAED-RLCIPVPL 255
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + HG+T V P F P+ +L + E C
Sbjct: 256 YHCFGMVLGNLACLTHGATIVYPNDGFDPLLTLECVQDEAC 296
>gi|46116982|ref|XP_384509.1| hypothetical protein FG04333.1 [Gibberella zeae PH-1]
Length = 575
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H+R Q + +N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D +
Sbjct: 189 HQRLYQAMTKVLPHQVVNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRLGPAD-VLC 247
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG V PA F +L+AI+ E+C
Sbjct: 248 CPPPLFHCFGLVLGLLAVVTHGGKIVYPAEVFDIQATLQAISDEQC 293
>gi|339327543|ref|YP_004687236.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
gi|338167700|gb|AEI78755.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
Length = 557
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++ +L+ D INIQFTSGTTG+PK A LTH+N++NN F+ + +D + +
Sbjct: 192 RLDAVTATLSAHDAINIQFTSGTTGNPKGATLTHHNVVNNGRFVAMAMCLGDSD-VLCIP 250
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP++H FG + +L ++ G+ V P +F P+ +++A ++E+C
Sbjct: 251 VPLYHCFGMVLSVLACVSVGACMVFPGEAFDPLATMQAASEERC 294
>gi|113869452|ref|YP_727941.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113528228|emb|CAJ94573.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16]
Length = 557
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++ +L+ D INIQFTSGTTG+PK A LTH+N++NN F+ + +D + +
Sbjct: 192 RLDAVTATLSALDAINIQFTSGTTGNPKGATLTHHNVVNNGRFVAIAMRLGDSD-VLCIP 250
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP++H FG + +L ++ G+ V P +F P+ +++A ++E+C
Sbjct: 251 VPLYHCFGMVLSVLACVSVGACMVFPGEAFDPLATMQAASEERC 294
>gi|398864574|ref|ZP_10620107.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398244873|gb|EJN30407.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 565
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D ++++ VP++H F
Sbjct: 203 SLHFDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-RLVIPVPLYHCF 261
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G MG L + HGST + P +F P+ +L +A+EK
Sbjct: 262 GMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVAEEK 297
>gi|336311874|ref|ZP_08566832.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
gi|335864620|gb|EGM69703.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
Length = 575
Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
+G D++ + E+I K L+ D INIQFTSGTTG PK A L+H+N++NN
Sbjct: 186 VGMLNFDDLLVDVTADDKATLERIGKELSPLDAINIQFTSGTTGSPKGATLSHHNILNNG 245
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+ + ++F D K+ + VP++H FG +G L + G+ V P SF P+ +L+ +
Sbjct: 246 YLVAEAMKFTCHD-KLCIPVPLYHCFGMVLGNLVCLAKGAAAVFPGESFDPLITLQVVEN 304
Query: 181 EKC 183
E+C
Sbjct: 305 ERC 307
>gi|429756335|ref|ZP_19288932.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171453|gb|EKY13073.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 542
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF +L A+ KEKC
Sbjct: 242 NLACTVHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|420149135|ref|ZP_14656316.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754197|gb|EJF37638.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 542
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V+P SF +L A+ KEKC
Sbjct: 242 NIACTTHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|358448423|ref|ZP_09158927.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
gi|357227520|gb|EHJ05981.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
Length = 562
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQFTSGTTG+PK A LTH+N++NN F+G+ + D ++++ VP++H FG
Sbjct: 200 LQFDDPINIQFTSGTTGNPKGATLTHHNILNNGYFVGESQILTEKD-RLVIPVPLYHCFG 258
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L + HGST + P F+P L+A+ +EK
Sbjct: 259 MVMGNLGCITHGSTMIYPGEGFEPKSVLQAVHQEKA 294
>gi|121596053|ref|YP_987949.1| AMP-binding domain-containing protein [Acidovorax sp. JS42]
gi|120608133|gb|ABM43873.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 578
Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 41 RPSAYKADALPTKLTRLAL-------------RMGTFRLSDIMQGAGPEYHRRREQISKS 87
+P A +A LPT T + + + G R S +M G R + I+
Sbjct: 154 QPGALQAARLPTLRTVVWIDAAGSGVAGQGDEQPGMLRFSTLM-ARGDAQDARIDAIAAQ 212
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQFTSGTTG PK A LTH N++NN FIG+ ++ D ++ + VP++H FG
Sbjct: 213 LHNTDPINIQFTSGTTGFPKGATLTHRNILNNGFFIGECMKLTPAD-RLCIPVPLYHCFG 271
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L + HGST V P F + L + E+C
Sbjct: 272 MVLGNLACLTHGSTIVYPNDGFDALTVLETVQAERC 307
>gi|408389804|gb|EKJ69229.1| hypothetical protein FPSE_10598 [Fusarium pseudograminearum CS3096]
Length = 575
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H+R Q + +N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D +
Sbjct: 189 HQRLYQAMTKVLPHQVVNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRLGPAD-VLC 247
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG V PA F +L+AI+ E+C
Sbjct: 248 CPPPLFHCFGLVLGLLAVVTHGGKIVYPAEVFDIQATLQAISDEQC 293
>gi|393780324|ref|ZP_10368542.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608796|gb|EIW91634.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 542
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNGYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+T V+P SF +L A+ KEKC
Sbjct: 242 NIACTTHGATMVIPNDSFDATKTLEAVEKEKC 273
>gi|385330740|ref|YP_005884691.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
gi|311693890|gb|ADP96763.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
Length = 548
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQFTSGTTG+PK A LTH+N++NN F+G+ + D ++++ VP++H FG
Sbjct: 186 LQFDDPINIQFTSGTTGNPKGATLTHHNILNNGYFVGESQLLTEKD-RLVIPVPLYHCFG 244
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L + HGST + P F+P L+A+ +EK
Sbjct: 245 MVMGNLGCITHGSTMIYPGEGFEPKSVLQAVHQEKA 280
>gi|326335689|ref|ZP_08201875.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692118|gb|EGD34071.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 542
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
RR E++ D +NIQ+TSGTTG+P+ L+H+N++NN+ FIG R+ + D ++ +
Sbjct: 174 RREEKVQFD----DPVNIQYTSGTTGNPRGVTLSHHNILNNAYFIGIRMNYTHLD-RVCI 228
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FG +G L HG+T V+P SF P+ +L + +E+C
Sbjct: 229 PVPFYHCFGMVIGNLACTVHGATMVIPNDSFNPIKTLEVVERERC 273
>gi|269836393|ref|YP_003318621.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
gi|269785656|gb|ACZ37799.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
Length = 546
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I SL + INIQ+TSGTTG PK A L+H+N++NN FIG+ L + + D ++ + VP
Sbjct: 173 EIEASLQFDEPINIQYTSGTTGFPKGATLSHHNILNNGFFIGEGLRYTEND-RVCIPVPF 231
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L HG+ VVP ++ P+ L + E+C
Sbjct: 232 YHCFGMVLGNLACTTHGACIVVPGEAYDPVAVLEMVQAERC 272
>gi|325279253|ref|YP_004251795.1| Long-chain-fatty-acid--CoA ligase [Odoribacter splanchnicus DSM
20712]
gi|324311062|gb|ADY31615.1| Long-chain-fatty-acid--CoA ligase [Odoribacter splanchnicus DSM
20712]
Length = 558
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D +NIQ+TSGTTG+PK A L+H+N++NN FIG+RL++ + D + L VP +H F
Sbjct: 200 SLQFDDPVNIQYTSGTTGYPKGATLSHHNILNNGFFIGERLKYTEKD-IVCLPVPFYHCF 258
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G + + HG+ V+P F P L+ + E+C
Sbjct: 259 GMVLGNMAIVTHGACIVIPGEFFDPEQVLQTVENERC 295
>gi|93005170|ref|YP_579607.1| AMP-binding domain-containing protein [Psychrobacter cryohalolentis
K5]
gi|92392848|gb|ABE74123.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
Length = 602
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
P R+ Q+ + D IN+QFTSGTTG PK A L+H N++NN FIG+ + + D
Sbjct: 235 PRVAERQAQLKNT----DAINVQFTSGTTGTPKGATLSHRNILNNGYFIGEAMNLTEED- 289
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ + VP++H FG +G L + HG V P F+P+ L+A+ +EKC
Sbjct: 290 RLCIPVPLYHCFGMVLGNLAILTHGGCIVYPNDGFEPLSVLQAVEEEKC 338
>gi|406596826|ref|YP_006747956.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406598074|ref|YP_006749204.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406374147|gb|AFS37402.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
gi|406375395|gb|AFS38650.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
Length = 579
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E + +L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP
Sbjct: 208 EAVESNLSANDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQAMRFTHKD-KLCIPVP 266
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 267 LYHCFGMVLGNLVCLASGACAVFPGESFDPETTLRTVEEEKC 308
>gi|408421259|ref|YP_006762673.1| long-chain-fatty-acid--CoA ligase LcfA [Desulfobacula toluolica
Tol2]
gi|405108472|emb|CCK81969.1| LcfA: long-chain-fatty-acid--CoA ligase [Desulfobacula toluolica
Tol2]
Length = 550
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
EY R++++S D +N+Q+TSGTTG PK LTHYN+ NN FIG F + D +
Sbjct: 182 EYLARQKELSP----HDVVNMQYTSGTTGFPKGVMLTHYNIGNNGFFIGANQNFSEHD-R 236
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G+L A+NHG+ V+ F P+ + ++ +EKC
Sbjct: 237 VCLPVPLFHCFGCVLGVLAAVNHGTCMVI-LEGFDPLMVMSSVEQEKC 283
>gi|398852244|ref|ZP_10608909.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
gi|398244606|gb|EJN30150.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
Length = 565
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
S +L+ +NIQ+TSGTTG PK A L+HYN++NN +G+ + TD ++++ VP++H
Sbjct: 201 SDNLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESIGLTPTD-RLVIPVPLYH 259
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
FG MG L + HGST + P +F P+ +L+ +A+EK
Sbjct: 260 CFGMVMGNLGCITHGSTMIYPNDAFDPLLTLQTVAEEK 297
>gi|186477771|ref|YP_001859241.1| AMP-binding domain-containing protein [Burkholderia phymatum
STM815]
gi|184194230|gb|ACC72195.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 576
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDIMQ-GAGPEYHRRREQISKSLNCRDGI 94
P A LP R+ +RM G SD+++ G + + I +L+ D I
Sbjct: 162 PGDLHAARLPD--LRIVIRMCDTETPGMLTFSDVIERGRTALDPAKLDAIGATLDPNDPI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEED-SLCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G+ V P +F+P +LRA+++EKC
Sbjct: 279 CVSVGAAMVFPGEAFEPGATLRAVSEEKC 307
>gi|299535045|ref|ZP_07048371.1| acyl-CoA synthase [Lysinibacillus fusiformis ZC1]
gi|424737899|ref|ZP_18166346.1| acyl-CoA synthase [Lysinibacillus fusiformis ZB2]
gi|298729541|gb|EFI70090.1| acyl-CoA synthase [Lysinibacillus fusiformis ZC1]
gi|422948183|gb|EKU42568.1| acyl-CoA synthase [Lysinibacillus fusiformis ZB2]
Length = 544
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G SD++ A + +Q +SL+ D INIQ+TSGTTG PK LTH+NL+NN+
Sbjct: 161 GVLNWSDVLTAAEQVTEEQLDQREQSLHYDDVINIQYTSGTTGFPKGVMLTHFNLVNNAV 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + + D ++ + VP FH FG +G L G T+VP F P + LR + +E
Sbjct: 221 NIAECMRLTPED-RLCIPVPFFHCFGCVIGTLAITTSGG-TMVPVQEFSPEEVLRTVQQE 278
Query: 182 KC 183
KC
Sbjct: 279 KC 280
>gi|145488402|ref|XP_001430205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397301|emb|CAK62807.1| unnamed protein product [Paramecium tetraurelia]
Length = 572
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 13 DRIGESQPFRERTLSHQDKIRPGRESNP---RPSAYKADALPTKLTRLAL----RMGTFR 65
+++G T H + + +E P +P ++ +P + + + + G F
Sbjct: 120 NKVGCKALVLRSTFKHSNYVSMIKELAPELDQPGNLNSNRIPALRSLILIDDVHKKGFFN 179
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
++ G + + + D NIQFTSGTTG PK A L+H N++NN ++G+
Sbjct: 180 FKELFSIFGTSHLNEVDSRMSQQDPDDITNIQFTSGTTGAPKGACLSHLNILNNGKYVGE 239
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ + + D K+++ VP++H FG MG L +N+GST V P+ F +L A+ KC
Sbjct: 240 RVRYTEKD-KVVIAVPLYHCFGMVMGNLACINYGSTMVYPSDGFSAGATLEAVTNYKC 296
>gi|170722114|ref|YP_001749802.1| acyl-CoA synthetase [Pseudomonas putida W619]
gi|169760117|gb|ACA73433.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 557
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 38 SNPRPSAYKADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
+N +P A + P ++L + G D+ A + + L D
Sbjct: 144 ANSQPGALACERFPELRGVVSLAIAPPSGLLAWHDLQARADAVSAQALAERQAQLQPGDP 203
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK A L+H N++NN +G+ L + D ++++ VP++H FG M L
Sbjct: 204 INIQYTSGTTGFPKGATLSHNNVLNNGYMVGESLGLTEHD-RLVVPVPLYHCFGMVMANL 262
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
M HGST + P +F P+ +LRA+A+EK
Sbjct: 263 GCMTHGSTLIYPNDAFDPLATLRAVAEEK 291
>gi|68536632|ref|YP_251337.1| AMP-binding protein [Corynebacterium jeikeium K411]
gi|68264231|emb|CAI37719.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 564
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 41 RPSAYKA--DALPTKLTR----LALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
+ S Y+A DA ++ +R + G+ R ++ A + + REQ L+ D I
Sbjct: 147 KDSNYRAMIDAAESQFSRHNYKETIFFGSERWDELANHAILDLNPVREQ----LHPDDPI 202
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQ+TSGTTG K A LTH N++NN +G+ L++ D K+++ VP FH FG MG L
Sbjct: 203 NIQYTSGTTGMAKGATLTHRNILNNGYLVGETLQYTDQD-KVVIPVPFFHCFGMVMGNLG 261
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A+ HG+TT++ P F P L A+ K
Sbjct: 262 AITHGATTIIAGPVFNPQSVLEAVEHGKA 290
>gi|333986735|ref|YP_004519342.1| long-chain-fatty-acid--CoA ligase [Methanobacterium sp. SWAN-1]
gi|333824879|gb|AEG17541.1| Long-chain-fatty-acid--CoA ligase [Methanobacterium sp. SWAN-1]
Length = 552
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ K+++ RD +N+Q+TSGTTG PK LTH N++NN +IG R +F + D ++ L VP+
Sbjct: 181 KVKKTVSNRDVVNMQYTSGTTGFPKGVMLTHRNILNNGFYIGDRQDFTEKD-RLCLPVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G++ + HG T V+ F P+ +L A+ KE+C
Sbjct: 240 FHCFGIVLGVMALLTHGGTLVM-LEIFDPLLALAAVHKERC 279
>gi|407689016|ref|YP_006804189.1| AMP-binding protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292396|gb|AFT96708.1| AMP-binding domain protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 579
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E + +L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP
Sbjct: 208 EAVESNLSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQAMRFTHKD-KLCIPVP 266
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 267 LYHCFGMVLGNLVCLASGACAVFPGESFDPETTLRTVEEEKC 308
>gi|407790159|ref|ZP_11137255.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
gi|407205174|gb|EKE75150.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
Length = 558
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ +D INIQFTSGTTG+PK A L+H+N++NN+ +G + D K+ + VP++H FG
Sbjct: 197 LSPQDPINIQFTSGTTGNPKGATLSHHNILNNAKLVGDAMGMSPAD-KLCIPVPLYHCFG 255
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L + HG+T V PA +F +L+A+++E+C
Sbjct: 256 MVLGSLLCVAHGATAVFPAEAFDADSTLKAVSEERC 291
>gi|388468862|ref|ZP_10143072.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas synxantha BG33R]
gi|388012442|gb|EIK73629.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas synxantha BG33R]
Length = 545
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 61 MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
M +LS + G PE + R+ SL+ +NIQ+TSGTTG PK A L+H+N++NN
Sbjct: 160 MSWSQLSALGAGVSPEQLQSRQ---TSLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNG 216
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
+G+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+
Sbjct: 217 YMVGESLGLTAQD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAE 275
Query: 181 EK 182
E+
Sbjct: 276 ER 277
>gi|167763863|ref|ZP_02435990.1| hypothetical protein BACSTE_02244 [Bacteroides stercoris ATCC
43183]
gi|167697979|gb|EDS14558.1| AMP-binding enzyme [Bacteroides stercoris ATCC 43183]
Length = 548
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + S+I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 159 GMYNTSEILLLGDNVEDTRLNELKSRVSCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGF 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 219 LTGEHMKFTAAD-KLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFNPLVVLASIHKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|265767313|ref|ZP_06094979.1| dicarboxylate-CoA ligase PimA [Bacteroides sp. 2_1_16]
gi|263252618|gb|EEZ24130.1| dicarboxylate-CoA ligase PimA [Bacteroides sp. 2_1_16]
Length = 558
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 190 ELKSQVNCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKFTGND-KLCCCVPL 248
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KEKC
Sbjct: 249 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKEKC 288
>gi|407685098|ref|YP_006800272.1| AMP-binding protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246709|gb|AFT75895.1| AMP-binding domain protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 579
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E + +L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP
Sbjct: 208 EAVESNLSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQAMRFTHKD-KLCIPVP 266
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 267 LYHCFGMVLGNLVCLASGACAVFPGESFDPETTLRTVEEEKC 308
>gi|260577833|ref|ZP_05845767.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258604060|gb|EEW17303.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 564
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 41 RPSAYKA--DALPTKLTR----LALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
+ S Y+A DA ++ +R + G+ R ++ A + + REQ L+ D I
Sbjct: 147 KDSNYRAMIDAAESQFSRHNYKETIFFGSERWDELANHAILDLNPVREQ----LHPDDPI 202
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQ+TSGTTG K A LTH N++NN +G+ L++ D K+++ VP FH FG MG L
Sbjct: 203 NIQYTSGTTGMAKGATLTHRNILNNGYLVGETLQYTDQD-KVVIPVPFFHCFGMVMGNLG 261
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A+ HG+TT++ P F P L A+ K
Sbjct: 262 AITHGATTIIAGPVFNPQSVLEAVEHGKA 290
>gi|380692679|ref|ZP_09857538.1| AMP-binding domain protein [Bacteroides faecis MAJ27]
Length = 549
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDDRLTELKNQVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|313204958|ref|YP_004043615.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444274|gb|ADQ80630.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 549
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I KS++C + +N+Q+TSGTTG PK L+H+N+ NN G+ ++F + D K+ + VP+
Sbjct: 181 KIKKSVSCHEVVNMQYTSGTTGFPKGVMLSHHNIANNGYLTGEHMKFTQAD-KLCVCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ +L +I KE+C
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VEKFDPLITLASIHKERC 279
>gi|410862984|ref|YP_006978218.1| AMP-binding protein [Alteromonas macleodii AltDE1]
gi|410820246|gb|AFV86863.1| AMP-binding domain protein [Alteromonas macleodii AltDE1]
Length = 579
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP+
Sbjct: 209 EIEAELSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVAQAMRFTHKD-KLCIPVPL 267
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 268 YHCFGMVLGNLVCLASGACAVFPGESFAPETTLRTVEEEKC 308
>gi|332142719|ref|YP_004428457.1| AMP-binding domain-containing protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552741|gb|AEA99459.1| AMP-binding domain protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 579
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP+
Sbjct: 209 EIEAELSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVAQAMRFTHKD-KLCIPVPL 267
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 268 YHCFGMVLGNLVCLASGACAVFPGESFAPETTLRTVEEEKC 308
>gi|332882818|ref|ZP_08450429.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679320|gb|EGJ52306.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 545
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK LTH+N++NN+ FIG R+ + D ++ + VP +H FG +G
Sbjct: 186 DPVNIQYTSGTTGNPKGVTLTHHNILNNAYFIGVRMNYTDKD-RVCIPVPFYHCFGMVIG 244
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF +L A+ +E+C
Sbjct: 245 NLCCTAHGATMVIPNDSFDATKTLEAVERERC 276
>gi|262406093|ref|ZP_06082643.1| dicarboxylate-CoA ligase PimA [Bacteroides sp. 2_1_22]
gi|293371882|ref|ZP_06618286.1| AMP-binding domain protein [Bacteroides ovatus SD CMC 3f]
gi|294648161|ref|ZP_06725704.1| AMP-binding domain protein [Bacteroides ovatus SD CC 2a]
gi|294809718|ref|ZP_06768406.1| AMP-binding domain protein [Bacteroides xylanisolvens SD CC 1b]
gi|298480155|ref|ZP_06998354.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|336404386|ref|ZP_08585083.1| hypothetical protein HMPREF0127_02396 [Bacteroides sp. 1_1_30]
gi|345510598|ref|ZP_08790165.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D1]
gi|229443311|gb|EEO49102.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D1]
gi|262356968|gb|EEZ06058.1| dicarboxylate-CoA ligase PimA [Bacteroides sp. 2_1_22]
gi|292633128|gb|EFF51705.1| AMP-binding domain protein [Bacteroides ovatus SD CMC 3f]
gi|292636545|gb|EFF55020.1| AMP-binding domain protein [Bacteroides ovatus SD CC 2a]
gi|294443093|gb|EFG11872.1| AMP-binding domain protein [Bacteroides xylanisolvens SD CC 1b]
gi|298273964|gb|EFI15526.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|335943218|gb|EGN05059.1| hypothetical protein HMPREF0127_02396 [Bacteroides sp. 1_1_30]
Length = 549
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGDNVEDDRLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|340795049|ref|YP_004760512.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340534959|gb|AEK37439.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 570
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ ++L+ D INIQ+TSGTTG K A LTH+N++NN IG+RL + D ++++ VP F
Sbjct: 191 VRETLDPHDPINIQYTSGTTGMAKGATLTHHNVLNNGFMIGERLNYTDAD-RVVIPVPFF 249
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
H FG +GIL A+ HG+ +++P P F ++L A
Sbjct: 250 HCFGMVIGILAAVTHGAASIIPGPVFNAENTLEA 283
>gi|237718836|ref|ZP_04549317.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 2_2_4]
gi|229451968|gb|EEO57759.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 2_2_4]
Length = 549
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGDNVEDDRLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|432331437|ref|YP_007249580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
gi|432138146|gb|AGB03073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
Length = 566
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Query: 76 EYHRRREQIS--------KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL 127
++ ++ E+IS + L D INIQ+TSGTTG PK LTH+N++NN IG+ +
Sbjct: 178 DFLKKSEEISVDELKERGEGLTFDDPINIQYTSGTTGFPKGVVLTHHNVLNNGYIIGEGM 237
Query: 128 EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
F D ++ + VP +H FG + L + HGST V+PAP+F + L+ + KE C
Sbjct: 238 GFSDKD-RLCIPVPFYHCFGMVLSNLACVTHGSTMVLPAPTFDAEEVLKTVEKEHC 292
>gi|400289149|ref|ZP_10791181.1| AMP-binding domain protein [Psychrobacter sp. PAMC 21119]
Length = 591
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
P R+ Q+ + D IN+QFTSGTTG PK A L+H N++NN FIG+ + + D
Sbjct: 224 PRVAERQAQLKNT----DAINVQFTSGTTGTPKGATLSHRNILNNGYFIGEAMNLTEED- 278
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ + VP++H FG +G L + HG V P F+P+ L+A+ +EKC
Sbjct: 279 RLCIPVPLYHCFGMVLGNLAILTHGGCIVYPNDGFEPLTVLQAVEEEKC 327
>gi|294495806|ref|YP_003542299.1| AMP-dependent synthetase and ligase [Methanohalophilus mahii DSM
5219]
gi|292666805|gb|ADE36654.1| AMP-dependent synthetase and ligase [Methanohalophilus mahii DSM
5219]
Length = 527
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I S D N+Q+TSGTTG PK LTH N++NN +IG++ +F D ++ L VP+
Sbjct: 157 KIKASTTADDVANMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTDQD-RLCLPVPL 215
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G+L A++HG+T V+ +F P+ L A+ KEKC
Sbjct: 216 FHCFGIVLGVLAALSHGATLVM-LETFDPLLVLAAVQKEKC 255
>gi|224371238|ref|YP_002605402.1| AMP-binding protein [Desulfobacterium autotrophicum HRM2]
gi|223693955|gb|ACN17238.1| AcsL4 [Desulfobacterium autotrophicum HRM2]
Length = 550
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+C D +N+Q+TSGTTG PK LTHYN+ NN +IG+ F + D ++ L VP+FH F
Sbjct: 189 TLDCHDVVNMQYTSGTTGFPKGVMLTHYNIGNNGFWIGENQRFSEND-RLCLPVPLFHCF 247
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G+L A+ HG+ V+ F P+ + ++ +E+C
Sbjct: 248 GCVLGVLAAVTHGTAMVI-LEGFDPLLIMASVEQERC 283
>gi|393782798|ref|ZP_10370980.1| hypothetical protein HMPREF1071_01848 [Bacteroides salyersiae
CL02T12C01]
gi|392672183|gb|EIY65653.1| hypothetical protein HMPREF1071_01848 [Bacteroides salyersiae
CL02T12C01]
Length = 549
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ + Q+ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDKELTQLKNQVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|359786297|ref|ZP_09289433.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359296411|gb|EHK60663.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 567
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G +R +D + A + +L D INIQ+TSGTTG PK A L+H+N++NN
Sbjct: 177 GMWRWADFINEASKVSQTDVNDLQATLQFDDPINIQYTSGTTGFPKGATLSHHNILNNGF 236
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F D ++++ VP++H FG MG L M HG+ + P F P L+A+ ++
Sbjct: 237 FVAESMGFTSED-RLVIPVPLYHCFGMVMGNLGCMTHGAAMIYPDEGFDPGKVLKAVHEQ 295
Query: 182 K 182
K
Sbjct: 296 K 296
>gi|326331582|ref|ZP_08197872.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
gi|325950838|gb|EGD42888.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
Length = 542
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ + L+ D INIQ+TSGTTG PK A L+H N++NN F+ + + F + D ++ + VP
Sbjct: 176 DHVDYPLDPNDPINIQYTSGTTGFPKGATLSHRNILNNGFFVTETIHFTEED-RLCIPVP 234
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG M L + HG+T V+P P F P +L+ + EKC
Sbjct: 235 FYHCFGMVMANLGSTTHGATMVIPGPGFDPRTTLQTVQDEKC 276
>gi|295085500|emb|CBK67023.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Bacteroides
xylanisolvens XB1A]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 178 RLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGFLTGEHMKF-TADDKLCCC 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 237 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKERC 279
>gi|298386117|ref|ZP_06995674.1| AMP-binding enzyme family protein [Bacteroides sp. 1_1_14]
gi|298261345|gb|EFI04212.1| AMP-binding enzyme family protein [Bacteroides sp. 1_1_14]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDDRLTELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|255692635|ref|ZP_05416310.1| AMP-binding enzyme family protein [Bacteroides finegoldii DSM
17565]
gi|260621611|gb|EEX44482.1| AMP-binding enzyme [Bacteroides finegoldii DSM 17565]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 178 RLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGFLTGEHMKF-TADDKLCCC 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 237 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKERC 279
>gi|429751522|ref|ZP_19284435.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429180467|gb|EKY21687.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 544
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG+PK L+H+N++NN+ FIG R+ + + D ++ + VP +H FG +G
Sbjct: 183 DPVNIQYTSGTTGNPKGVTLSHHNILNNAYFIGIRMNYTEKD-RVCIPVPFYHCFGMVIG 241
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L HG+T V+P SF +L I KEKC
Sbjct: 242 NLACTVHGATMVIPNDSFDATKTLETIEKEKC 273
>gi|402699063|ref|ZP_10847042.1| AMP-binding domain protein [Pseudomonas fragi A22]
Length = 560
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+LS + G E RR+ S+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 181 QLSTLAAGVNAEQLDRRQ---ASVQPGQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 237
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L +D ++++ VP++H FG MG L + HG+T + P +F P +L+A+A+E+
Sbjct: 238 ESLGLTSSD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPGEAFDPGLTLQAVAQER 294
>gi|317478326|ref|ZP_07937490.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
gi|316905485|gb|EFV27275.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
Length = 548
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ + C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 159 GMYNTAEILLLGNNIEDSRLNELKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ + VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 219 LTGEHMKF-TADDKLCVCVPLFHCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|423214178|ref|ZP_17200706.1| hypothetical protein HMPREF1074_02238 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693123|gb|EIY86358.1| hypothetical protein HMPREF1074_02238 [Bacteroides xylanisolvens
CL03T12C04]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGDNVEDDRLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|29348191|ref|NP_811694.1| AMP-binding protein [Bacteroides thetaiotaomicron VPI-5482]
gi|29340094|gb|AAO77888.1| long-chain-fatty-acid--CoA ligase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDDRLTELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|398894512|ref|ZP_10646722.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398182332|gb|EJM69852.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 564
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+ H R++ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 196 QLHERQD----SLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-R 250
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 251 LVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLNTVAEEK 297
>gi|383121918|ref|ZP_09942621.1| hypothetical protein BSIG_1931 [Bacteroides sp. 1_1_6]
gi|251841525|gb|EES69606.1| hypothetical protein BSIG_1931 [Bacteroides sp. 1_1_6]
Length = 549
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 160 GMYNTAEILLLGNNVEDDRLTELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGF 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 220 LTGEHMKF-TADDKLCCCVPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKE 277
Query: 182 KC 183
+C
Sbjct: 278 RC 279
>gi|222112214|ref|YP_002554478.1| AMP-binding protein [Acidovorax ebreus TPSY]
gi|221731658|gb|ACM34478.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 578
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 41 RPSAYKADALPTKLTRLAL-------------RMGTFRLSDIMQGAGPEYHRRREQISKS 87
+P A +A LPT T + + + G R S +M G R + I+
Sbjct: 154 QPGALQAARLPTLRTVVWIDAAGSGVAGQGDEQPGMLRFSTLM-ARGDAQDARIDAIAAQ 212
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQFTSGTTG PK A LTH N++NN FIG+ + D ++ + VP++H FG
Sbjct: 213 LHNTDPINIQFTSGTTGFPKGATLTHRNILNNGFFIGECMRLTPED-RLCIPVPLYHCFG 271
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L + HGST V P F + L + E+C
Sbjct: 272 MVLGNLACLTHGSTIVYPNDGFDALTVLETVQAERC 307
>gi|66548355|ref|XP_394463.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like,
partial [Apis mellifera]
Length = 432
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT RL+D+ Q A R ++C +G NIQFTSGTTG+PKA L+H +L+NN+
Sbjct: 219 GTRRLADVEQLASKIEVERIAGEQDRISCHNGSNIQFTSGTTGNPKATLLSHRSLVNNAR 278
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
R E + ++K+ L VP FH +G G+L + G T V+ A SF P SL AI E
Sbjct: 279 QNVLRSEI-RMENKVCLNVPFFHVYGLIKGLLTMFHTGVTIVLEARSFNPTKSLDAIIGE 337
Query: 182 KC 183
KC
Sbjct: 338 KC 339
>gi|134097188|ref|YP_001102849.1| AMP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005355|ref|ZP_06563328.1| AMP-binding domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909811|emb|CAL99923.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 538
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQ+TSGTTG PK A L+H+N++NN F+G+ + + D ++ + VP +H FG
Sbjct: 176 LSADDPINIQYTSGTTGFPKGATLSHHNILNNGFFVGELCRYTEAD-RVCIPVPFYHCFG 234
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L + G+ V+P+ F P +L A+A+E+C
Sbjct: 235 MVMGNLACTSRGAAMVIPSEGFDPRTALAAVAEERC 270
>gi|270295330|ref|ZP_06201531.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274577|gb|EFA20438.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 548
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ +
Sbjct: 177 RLNELKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCVC 235
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 236 VPLFHCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKERC 278
>gi|109896485|ref|YP_659740.1| AMP-dependent synthetase and ligase [Pseudoalteromonas atlantica
T6c]
gi|109698766|gb|ABG38686.1| AMP-dependent synthetase and ligase [Pseudoalteromonas atlantica
T6c]
Length = 566
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + Q G + I+ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYERVTQMGGDAERNQMATITSQLLPDDPINIQFTSGTTGQPKGATLTHCNILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ + D ++ + VP++H FG +G L+ + HG+T + P +F P+ +L+ + KE
Sbjct: 233 LAGEGMRLSPND-RVCIPVPLYHCFGMVLGNLSCIAHGATMIYPNDAFDPLTTLQVVEKE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|423301312|ref|ZP_17279336.1| hypothetical protein HMPREF1057_02477 [Bacteroides finegoldii
CL09T03C10]
gi|408471913|gb|EKJ90442.1| hypothetical protein HMPREF1057_02477 [Bacteroides finegoldii
CL09T03C10]
Length = 549
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 178 RLNELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGFLTGEHMKFTAND-KLCCC 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 237 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKERC 279
>gi|256828217|ref|YP_003156945.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256577393|gb|ACU88529.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 550
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +R R+ SL+ D +N+Q+TSGTTG PK LTHYN+ NN +IG+ +F D +
Sbjct: 180 EDYRARQ---ASLDPHDVVNMQYTSGTTGFPKGVMLTHYNIGNNGFWIGENQKFTHND-R 235
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G+L A++H +T V+ F P+ L A+ +EKC
Sbjct: 236 VCLPVPLFHCFGCVLGVLAAISHAATLVI-LEGFNPLMVLAAVEEEKC 282
>gi|398996416|ref|ZP_10699273.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398126947|gb|EJM16368.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 565
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+D+ E R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G
Sbjct: 184 QLADLAASVSKEQLLERQ---DSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVG 240
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HGST + P +F P+ +L +A+EK
Sbjct: 241 ESLGLTAAD-RLVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLATVAEEK 297
>gi|340623898|ref|YP_004742351.1| AMP-binding domain-containing protein [Methanococcus maripaludis
X1]
gi|339904166|gb|AEK19608.1| AMP-binding domain protein [Methanococcus maripaludis X1]
Length = 549
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
K L+ D IN+Q+TSGTTG PK LTH N++NN +IG++ +F + + ++ L VP+FH
Sbjct: 184 KGLDSNDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTE-EERLCLPVPLFHC 242
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G+L + HG T V+ F P+ L AI KEKC
Sbjct: 243 FGIVLGVLALLTHGGTLVM-LEIFDPLLVLAAIQKEKC 279
>gi|333912279|ref|YP_004486011.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333742479|gb|AEF87656.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 572
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ G R + ++ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 182 GMLRFSSLL-ARGDAQDARIDTVAATLKNTDPINIQFTSGTTGFPKGATLTHRNILNNGF 240
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGS V P F P+ L + E
Sbjct: 241 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSAIVYPNDGFDPLLVLETVQAE 299
Query: 182 KC 183
+C
Sbjct: 300 RC 301
>gi|342873291|gb|EGU75497.1| hypothetical protein FOXB_14009 [Fusarium oxysporum Fo5176]
Length = 575
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H+R Q + +N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D +
Sbjct: 189 HQRLYQAMTKVLPHQVVNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRLGPAD-ILC 247
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+L + HG V PA F +L+AI+ E+C
Sbjct: 248 CPPPLFHCFGLVLGLLAVVTHGGKIVYPAEVFDIDATLKAISDEQC 293
>gi|160901406|ref|YP_001566988.1| AMP-binding domain-containing protein [Delftia acidovorans SPH-1]
gi|160366990|gb|ABX38603.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 572
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G R S ++ G R + ++ +L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 182 GMLRFSSLL-ARGDAQDARIDAVAATLKNTDPINIQFTSGTTGFPKGATLTHRNILNNGF 240
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
FIG+ + D ++ + VP++H FG +G L HGS V P F P+ L + E
Sbjct: 241 FIGECMRLTPED-RLCIPVPLYHCFGMVLGNLACFTHGSAIVYPNDGFDPLLVLETVQAE 299
Query: 182 KC 183
+C
Sbjct: 300 RC 301
>gi|332801003|ref|NP_001193902.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Apis
mellifera]
Length = 608
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT RL+D+ Q A R ++C G NIQFTSGTTG+PKA L+H +L+NN+
Sbjct: 219 GTRRLADVEQLASKIEVERIAGEQDRISCHSGSNIQFTSGTTGNPKATLLSHRSLVNNAR 278
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
R E + ++K+ L VP FH +G G+L + G T V+ A SF P SL AI E
Sbjct: 279 QNVLRSEI-RMENKVCLNVPFFHVYGLIKGLLTMFHTGVTIVLEARSFNPTKSLDAIIGE 337
Query: 182 KC 183
KC
Sbjct: 338 KC 339
>gi|452747632|ref|ZP_21947425.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
gi|452008376|gb|EME00616.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
Length = 560
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LVEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L+ + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLKLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|85094118|ref|XP_959826.1| hypothetical protein NCU06063 [Neurospora crassa OR74A]
gi|28921281|gb|EAA30590.1| hypothetical protein NCU06063 [Neurospora crassa OR74A]
Length = 580
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H ++ L C N+QFTSGTTG PKAA LTH+N++NN+ FIG R++ D +
Sbjct: 196 HHMERKVLPHLVC----NLQFTSGTTGLPKAAMLTHHNIVNNARFIGDRMKLGPDD-VLC 250
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+++ M HG V PA F +L+AI E+C
Sbjct: 251 CPPPLFHCFGLVLGLMSVMTHGGKIVYPAEVFDAPATLKAIVNERC 296
>gi|410695029|ref|YP_003625651.1| putative Long-chain-fatty-acid--CoA ligase [Thiomonas sp. 3As]
gi|294341454|emb|CAZ89871.1| putative Long-chain-fatty-acid--CoA ligase [Thiomonas sp. 3As]
Length = 567
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 62 GTFRLSD-IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G R SD I +G+ + + + +L+ + INIQFTSGTTG PK A LTH N++NN
Sbjct: 177 GMLRFSDWIARGSADD--PAVAEAAATLHAHEPINIQFTSGTTGFPKGATLTHSNILNNG 234
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
FIG+ ++ D ++ + VP++H FG +G L + HG+T V P F P+ +L +
Sbjct: 235 FFIGEAMKLTAED-RLCIPVPLYHCFGMVLGNLACLTHGATIVYPNDGFDPLLTLECVQD 293
Query: 181 EKC 183
E C
Sbjct: 294 EAC 296
>gi|423304662|ref|ZP_17282661.1| hypothetical protein HMPREF1072_01601 [Bacteroides uniformis
CL03T00C23]
gi|423310224|ref|ZP_17288208.1| hypothetical protein HMPREF1073_02958 [Bacteroides uniformis
CL03T12C37]
gi|392682420|gb|EIY75765.1| hypothetical protein HMPREF1073_02958 [Bacteroides uniformis
CL03T12C37]
gi|392684112|gb|EIY77444.1| hypothetical protein HMPREF1072_01601 [Bacteroides uniformis
CL03T00C23]
Length = 564
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R ++ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ +
Sbjct: 193 RLNELKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCVC 251
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 252 VPLFHCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKERC 294
>gi|45358129|ref|NP_987686.1| AMP-binding domain-containing protein [Methanococcus maripaludis
S2]
gi|44920886|emb|CAF30122.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II related
protein [Methanococcus maripaludis S2]
Length = 549
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +++M + + K L+ D IN+Q+TSGTTG PK LTH N++NN
Sbjct: 160 GMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGY 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG++ +F + + ++ L VP+FH FG +G+L + HG T V+ F P+ L AI KE
Sbjct: 220 YIGEKQKFTE-EERLCLPVPLFHCFGIVLGVLALLTHGGTLVM-LEIFDPLLVLAAIQKE 277
Query: 182 KC 183
KC
Sbjct: 278 KC 279
>gi|410669278|ref|YP_006921649.1| acyl-CoA synthetase [Methanolobus psychrophilus R15]
gi|409168406|gb|AFV22281.1| acyl-CoA synthetase [Methanolobus psychrophilus R15]
Length = 546
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++M + E I +L+C D IN+Q+TSGTTG PK LTH N++NN
Sbjct: 160 GMYNTRELMLLGQHSTDEKLESIKSTLDCNDVINMQYTSGTTGFPKGVMLTHSNILNNGL 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG R +F D ++ L VP+FH FG +G++ + H +T V+ + P+ L A+ KE
Sbjct: 220 SIGNRQKF-TCDDRLCLPVPLFHCFGIVLGVMAILTHRATLVM-LELYDPLMVLAAVQKE 277
Query: 182 KC 183
KC
Sbjct: 278 KC 279
>gi|398916882|ref|ZP_10657938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
gi|398173935|gb|EJM61749.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
Length = 565
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+ H R++ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 196 QLHERQD----SLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-R 250
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG MG L + HGST + P +F P+ +L +A EK
Sbjct: 251 LVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVADEK 297
>gi|336467272|gb|EGO55436.1| hypothetical protein NEUTE1DRAFT_102863 [Neurospora tetrasperma
FGSC 2508]
gi|350288099|gb|EGZ69335.1| acetyl-CoA synthetase-like protein [Neurospora tetrasperma FGSC
2509]
Length = 580
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H ++ L C N+QFTSGTTG PKAA LTH+N++NN+ FIG R++ D +
Sbjct: 196 HHMERKVLPHLVC----NLQFTSGTTGLPKAAMLTHHNIVNNARFIGDRMKLGPDD-VLC 250
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+++ M HG V PA F +L+AI E+C
Sbjct: 251 CPPPLFHCFGLVLGLMSVMTHGGKIVYPAEVFDAPATLKAIVDERC 296
>gi|298528111|ref|ZP_07015515.1| AMP-dependent synthetase and ligase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511763|gb|EFI35665.1| AMP-dependent synthetase and ligase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 550
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + L +++ G R + + L+ D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 163 GMYSLPELLALGGMTSDRDYQARRRELDPHDVVNMQYTSGTTGFPKGVMLTHYNIANNGY 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG+ + D +I L VP+FH FG +G+L A++H ST V+ F P+ + ++ E
Sbjct: 223 WIGEHQKLTHRD-RICLPVPLFHCFGCVLGVLAAVSHASTMVI-LEGFNPLMVMTSVEAE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|409196007|ref|ZP_11224670.1| AMP-binding domain protein [Marinilabilia salmonicolor JCM 21150]
Length = 545
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
R++Q++ C D +N+Q+TSGTTG PK LTH+N++NN +G +++ D ++LL
Sbjct: 183 ERKQQVT----CHDVVNMQYTSGTTGFPKGVMLTHHNIVNNGLGVGDNMKYTPKD-RLLL 237
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG +G+ + HG + V+ F P+ L A+ KEKC
Sbjct: 238 PVPLFHCFGCVLGVCAVITHGVSMVI-TEDFDPLKVLAAVQKEKC 281
>gi|398934088|ref|ZP_10666138.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
gi|398159328|gb|EJM47633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
Length = 565
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+ H R++ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 196 QLHERQD----SLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-R 250
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG MG L + HGST + P +F P+ +L +A EK
Sbjct: 251 LVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLSTVADEK 297
>gi|78064767|ref|YP_367536.1| AMP-binding protein [Burkholderia sp. 383]
gi|77965512|gb|ABB06892.1| AMP-dependent synthetase and ligase [Burkholderia sp. 383]
Length = 575
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 62 GTFRLSDIM----QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
G FR +D+M Q P + I +L + INIQFTSGTTG PK A LTH N++
Sbjct: 185 GMFRFADVMARGRQAVDPAL---LDAIGATLAATEPINIQFTSGTTGSPKGATLTHRNVV 241
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN I + F + D + + VP++H FG + +L ++ G+ V P +F P+ +L A
Sbjct: 242 NNGRSIATAMRFTEQD-TLCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEAFDPVATLAA 300
Query: 178 IAKEKC 183
+A E+C
Sbjct: 301 VADERC 306
>gi|167587926|ref|ZP_02380314.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 575
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G FR +D+M R + + +L D INIQFTSGTTG PK A L+H N++NN+
Sbjct: 185 GMFRFADVMARGRAALDRDALDALGATLASIDPINIQFTSGTTGSPKGATLSHRNVVNNA 244
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I + + F + D + + VP++H FG + +L ++ G+ V P +F P +L A+A
Sbjct: 245 RSIAQAMRFSEQD-ALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPAATLAAVAD 303
Query: 181 EKC 183
E+C
Sbjct: 304 ERC 306
>gi|34497235|ref|NP_901450.1| AMP-binding protein [Chromobacterium violaceum ATCC 12472]
gi|34103091|gb|AAQ59454.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 562
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 39 NPRPSAYKADALPTKLTRLALRMGTFRL------SDIMQGAGPEYHRRREQISKSLNCRD 92
+ RP ++ LP R LR+G RL S+++ + + + +L +
Sbjct: 145 DCRPGELQSVRLPA--LRWVLRIGQQRLPGMLAFSELLAEPSADELAALQALGAALRADE 202
Query: 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGI 152
NIQFTSGTTGHPK A L+H N++NN+ F+G + + D ++ + VP++H FG MG
Sbjct: 203 AANIQFTSGTTGHPKGATLSHRNILNNAWFVGAAMRLE-ADDRLCIPVPLYHCFGMVMGT 261
Query: 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + G+ V P F P+ L + +E+C
Sbjct: 262 LCCLCRGAAMVFPGEGFDPLSVLETVQEERC 292
>gi|333369906|ref|ZP_08461993.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
gi|332969073|gb|EGK08112.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
Length = 599
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D IN+QFTSGTTG PK A LTH N++NN FIG+ ++ D ++ + VP++H FG +G
Sbjct: 245 DPINVQFTSGTTGTPKGATLTHRNILNNGYFIGEAMDLSAED-RLCIPVPLYHCFGMVLG 303
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + HG + P F+P+ L+A+ +EKC
Sbjct: 304 NLAILTHGGCIIYPNDGFEPLSVLKAVEEEKC 335
>gi|159904718|ref|YP_001548380.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C6]
gi|159886211|gb|ABX01148.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C6]
Length = 549
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I K L+ D IN+Q+TSGTTG PK LTH N++NN +IG R +F + D ++ + VP+
Sbjct: 181 RIKKELDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGFYIGDRQKFTEED-RLCITVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + ++ + HG T V+ F P+ L A+ KEKC
Sbjct: 240 FHCFGIVLAVMAILTHGGTMVM-VELFDPLLVLAAVQKEKC 279
>gi|95930665|ref|ZP_01313399.1| AMP-dependent synthetase and ligase [Desulfuromonas acetoxidans DSM
684]
gi|95133317|gb|EAT14982.1| AMP-dependent synthetase and ligase [Desulfuromonas acetoxidans DSM
684]
Length = 554
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G SD+ A ++ + + +L+ + IN+Q+TSGTTG PK LTH+N++NN
Sbjct: 161 GMTNFSDLEGLADQVSEQQLDAVKATLDEHEVINMQYTSGTTGFPKGVMLTHHNIVNNGF 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG+ + F + D ++ + VP FH FG +G++ + HGS T+VP +F P + L+ I E
Sbjct: 221 NIGECMRFTEKD-RLCIPVPFFHCFGCVLGVMACVTHGS-TMVPVETFVPEEVLKTIEME 278
Query: 182 KC 183
KC
Sbjct: 279 KC 280
>gi|427388136|ref|ZP_18884019.1| hypothetical protein HMPREF9447_05052 [Bacteroides oleiciplenus YIT
12058]
gi|425724719|gb|EKU87593.1| hypothetical protein HMPREF9447_05052 [Bacteroides oleiciplenus YIT
12058]
Length = 548
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ + + + + C D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 159 GMYNTAEILLLGNNVEDEQLDTLKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGY 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ + VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 219 LTGEHMKF-TADDKLCVCVPLFHCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|222444733|ref|ZP_03607248.1| hypothetical protein METSMIALI_00346 [Methanobrevibacter smithii
DSM 2375]
gi|222434298|gb|EEE41463.1| AMP-binding enzyme [Methanobrevibacter smithii DSM 2375]
Length = 548
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++I K + D +N+Q+TSGT G PK LT N++N+ +IG+ + F + D ++ +QVP
Sbjct: 180 KEIKKEFDNNDVVNMQYTSGTEGFPKGVMLTSRNILNDGYYIGENMNFSEED-RLCIQVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG+ +G++ + HGS T+V F P+ +L AI KEKC
Sbjct: 239 LFHCFGSVLGVMAVITHGS-TIVMLEEFDPLLALSAIQKEKC 279
>gi|359441402|ref|ZP_09231302.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
gi|358036872|dbj|GAA67551.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
Length = 577
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ P + + I +LN INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMYSFNDVINLPTPAHELELKAIGANLNAEQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F +D K+ + +P++H F +G L ++ G+ + P SF +L + +E
Sbjct: 249 FVAESMHF-TSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPGDSFDAKTTLDVVQQE 307
Query: 182 KC 183
C
Sbjct: 308 GC 309
>gi|403340800|gb|EJY69695.1| Long-chain-fatty-acid--CoA ligase [Oxytricha trifallax]
Length = 542
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
EY ++ + ++N NIQFTSGTTG+PK A L+H+N++NN+ F+G+ +++ D K
Sbjct: 156 EYELQKRE--SNINFESPTNIQFTSGTTGYPKGATLSHFNILNNAYFVGQGMKYTPND-K 212
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
I++ VP++H FG +G L A+N G+T V P+ F P ++ AI +
Sbjct: 213 IMISVPLYHCFGMVIGNLCAINFGATMVYPSEGFDPKATMEAITQ 257
>gi|148642085|ref|YP_001272598.1| AMP-binding domain protein [Methanobrevibacter smithii ATCC 35061]
gi|261350725|ref|ZP_05976142.1| CoA ligase [Methanobrevibacter smithii DSM 2374]
gi|148551102|gb|ABQ86230.1| long-chain-fatty-acid-CoA ligase [Methanobrevibacter smithii ATCC
35061]
gi|288861509|gb|EFC93807.1| CoA ligase [Methanobrevibacter smithii DSM 2374]
Length = 548
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
++I K + D +N+Q+TSGT G PK LT N++N+ +IG+ + F + D ++ +QVP
Sbjct: 180 KEIKKEFDNNDVVNMQYTSGTEGFPKGVMLTSRNILNDGYYIGENMNFSEED-RLCIQVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG+ +G++ + HGS T+V F P+ +L AI KEKC
Sbjct: 239 LFHCFGSVLGVMAVITHGS-TIVMLEEFDPLLALSAIQKEKC 279
>gi|297619137|ref|YP_003707242.1| AMP-dependent synthetase and ligase [Methanococcus voltae A3]
gi|297378114|gb|ADI36269.1| AMP-dependent synthetase and ligase [Methanococcus voltae A3]
Length = 559
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +IM + E+ K + D +NIQ+TSGTTG PK LTH N++NN
Sbjct: 168 GMYNTHEIMLLGKHIADEKLEEAKKEVKNTDVVNIQYTSGTTGFPKGVMLTHRNILNNGY 227
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG+ + + + D ++ L VP+FH FG +G++ + HG T V+ F P+ +L A+ KE
Sbjct: 228 YIGESMHYSEKD-RVCLPVPLFHCFGIVLGVMATLTHGGTLVM-IELFDPVLTLAAVQKE 285
Query: 182 KC 183
+C
Sbjct: 286 RC 287
>gi|406889206|gb|EKD35461.1| hypothetical protein ACD_75C01903G0003 [uncultured bacterium]
Length = 551
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +R R+ ++L+ D +N+Q+TSGTTG PK LTH+N+ NN FIG+ F D +
Sbjct: 182 EEYRERQ---RTLSPHDVVNMQYTSGTTGFPKGVMLTHHNIGNNGFFIGENQHFSAKD-R 237
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G+L A+NHG+ V+ F P+ + ++ KE+C
Sbjct: 238 VCLPVPLFHCFGCVLGVLAAVNHGAALVI-LEGFDPLMVMTSVEKERC 284
>gi|126179036|ref|YP_001047001.1| AMP-dependent synthetase/ligase [Methanoculleus marisnigri JR1]
gi|125861830|gb|ABN57019.1| AMP-dependent synthetase and ligase [Methanoculleus marisnigri JR1]
Length = 566
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQ+TSGTTG PK LTH+N++NN IG+ ++F D ++ + VP +H FG +
Sbjct: 202 DAVNIQYTSGTTGFPKGVVLTHHNILNNGFIIGEGMKFTHED-RLCIPVPFYHCFGMVLS 260
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ ++ HG+ V+PAP F P L+A+ EKC
Sbjct: 261 NMASVTHGAAMVLPAPVFSPEAVLKAVQDEKC 292
>gi|150005247|ref|YP_001299991.1| AMP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294777356|ref|ZP_06742808.1| AMP-binding domain protein [Bacteroides vulgatus PC510]
gi|149933671|gb|ABR40369.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides vulgatus
ATCC 8482]
gi|294448824|gb|EFG17372.1| AMP-binding domain protein [Bacteroides vulgatus PC510]
Length = 551
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
+NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+FH FG
Sbjct: 188 VNCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDKLCVCVPLFHCFG 246
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 247 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 281
>gi|319643439|ref|ZP_07998062.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_40A]
gi|345517798|ref|ZP_08797261.1| acyl-CoA synthetase [Bacteroides sp. 4_3_47FAA]
gi|317384844|gb|EFV65800.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_40A]
gi|345457582|gb|EET16816.2| acyl-CoA synthetase [Bacteroides sp. 4_3_47FAA]
Length = 551
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
+NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+FH FG
Sbjct: 188 VNCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDKLCVCVPLFHCFG 246
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 247 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 281
>gi|148653865|ref|YP_001280958.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572949|gb|ABQ95008.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 596
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+ S+ M+ R E+ +K N D IN+QFTSGTTG PK A LTH N++NN FIG
Sbjct: 216 KFSEWMKEGDANDPRVAERQAKLKNT-DPINVQFTSGTTGTPKGATLTHRNILNNGYFIG 274
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ ++ D ++ + VP++H FG +G L + HG V P F+P+ L+A+ EKC
Sbjct: 275 EAMDLGPED-RLCIPVPLYHCFGMVLGNLAILTHGGCIVYPNDGFEPLSVLQAVQDEKC 332
>gi|423311788|ref|ZP_17289725.1| hypothetical protein HMPREF1058_00337 [Bacteroides vulgatus
CL09T03C04]
gi|392689903|gb|EIY83178.1| hypothetical protein HMPREF1058_00337 [Bacteroides vulgatus
CL09T03C04]
Length = 551
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
+NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+FH FG
Sbjct: 188 VNCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDKLCVCVPLFHCFG 246
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 247 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 281
>gi|336476845|ref|YP_004615986.1| AMP-dependent synthetase and ligase [Methanosalsum zhilinae DSM
4017]
gi|335930226|gb|AEH60767.1| AMP-dependent synthetase and ligase [Methanosalsum zhilinae DSM
4017]
Length = 544
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
+ I SL D IN+Q+TSGTTG PK LTH N++NN +IG+R +F + D ++ L
Sbjct: 178 KLNHIKNSLKSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGERQKFTEKD-RLCLP 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG +G+L + H T V+ +F P+ L A+ KEKC
Sbjct: 237 VPLFHCFGIVLGVLATLTHRGTLVM-IENFDPLMVLAAVQKEKC 279
>gi|386021952|ref|YP_005939977.1| AMP-binding protein [Pseudomonas stutzeri DSM 4166]
gi|327481925|gb|AEA85235.1| AMP-binding domain protein [Pseudomonas stutzeri DSM 4166]
Length = 560
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|339495326|ref|YP_004715619.1| AMP-binding domain-containing protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338802698|gb|AEJ06530.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 560
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|160883114|ref|ZP_02064117.1| hypothetical protein BACOVA_01082 [Bacteroides ovatus ATCC 8483]
gi|299144677|ref|ZP_07037745.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|336412571|ref|ZP_08592924.1| hypothetical protein HMPREF1017_00032 [Bacteroides ovatus
3_8_47FAA]
gi|383115155|ref|ZP_09935913.1| hypothetical protein BSGG_2965 [Bacteroides sp. D2]
gi|423292588|ref|ZP_17271159.1| hypothetical protein HMPREF1069_06202 [Bacteroides ovatus
CL02T12C04]
gi|156111586|gb|EDO13331.1| AMP-binding domain protein [Bacteroides ovatus ATCC 8483]
gi|298515168|gb|EFI39049.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|313695430|gb|EFS32265.1| hypothetical protein BSGG_2965 [Bacteroides sp. D2]
gi|335942617|gb|EGN04459.1| hypothetical protein HMPREF1017_00032 [Bacteroides ovatus
3_8_47FAA]
gi|392661460|gb|EIY55044.1| hypothetical protein HMPREF1069_06202 [Bacteroides ovatus
CL02T12C04]
Length = 549
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 181 ELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 279
>gi|442318693|ref|YP_007358714.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
gi|441486335|gb|AGC43030.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
Length = 594
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E SL D INIQ+TSGTTG PK A L+H+N++NN FIG+ L++ D ++ + VP
Sbjct: 220 EARESSLQFDDPINIQYTSGTTGSPKGATLSHHNVLNNGFFIGEALKYGPED-RVCVPVP 278
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L +HGST V+P +F + L A+ E+C
Sbjct: 279 FYHCFGMVIGNLACTSHGSTLVIPGEAFDALAVLEAVQAERC 320
>gi|431926248|ref|YP_007239282.1| acyl-CoA synthetase [Pseudomonas stutzeri RCH2]
gi|431824535|gb|AGA85652.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
stutzeri RCH2]
Length = 560
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|423226791|ref|ZP_17213256.1| hypothetical protein HMPREF1062_05442 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392626662|gb|EIY20705.1| hypothetical protein HMPREF1062_05442 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 548
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+F
Sbjct: 181 LKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGYLTGEHMKF-TSDDKLCVCVPLF 239
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 HCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKERC 278
>gi|375107842|ref|ZP_09754103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374668573|gb|EHR73358.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 562
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L C D INIQFTSGTTG PK A LTH+N++NN+ + + + F +TD + + VP++H FG
Sbjct: 199 LACHDPINIQFTSGTTGAPKGATLTHHNIVNNAIAVARCMRFSETD-SLCIPVPLYHCFG 257
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +L + G+ V P F+P +L A+ E C
Sbjct: 258 MVLAVLACVATGAKMVFPGEGFEPRATLAAVEDEAC 293
>gi|224537567|ref|ZP_03678106.1| hypothetical protein BACCELL_02446 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520809|gb|EEF89914.1| hypothetical protein BACCELL_02446 [Bacteroides cellulosilyticus
DSM 14838]
Length = 548
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+F
Sbjct: 181 LKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGYLTGEHMKF-TSDDKLCVCVPLF 239
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 HCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKERC 278
>gi|418291897|ref|ZP_12903853.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379063336|gb|EHY76079.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 560
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|288560584|ref|YP_003424070.1| acyl-CoA synthetase [Methanobrevibacter ruminantium M1]
gi|288543294|gb|ADC47178.1| acyl-CoA synthetase [Methanobrevibacter ruminantium M1]
Length = 554
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
+ ++I ++ D IN+Q+TSGT G PK LT N++N+ +IG+ + + + D ++LLQ
Sbjct: 180 KYQEIKDAVTQYDVINMQYTSGTEGFPKGVMLTSRNILNDGYYIGENMNYTEKD-RLLLQ 238
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FGT +G++ + HGST VV + P+ ++ I KEKC
Sbjct: 239 VPLFHCFGTVLGVMAVITHGSTMVV-LEEYDPLLAISPIQKEKC 281
>gi|392419993|ref|YP_006456597.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
gi|390982181|gb|AFM32174.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
Length = 560
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F+P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFEP 280
>gi|322700504|gb|EFY92259.1| long-chain-fatty-acid-CoA ligase, putative [Metarhizium acridum
CQMa 102]
Length = 570
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D + PMFH FG +G+L
Sbjct: 200 VNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRITSED-ILCCPPPMFHCFGLVLGLL 258
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG V PA F +L+AI+ E C
Sbjct: 259 AMVTHGGKIVYPAEVFDIPSTLQAISDEGC 288
>gi|119503775|ref|ZP_01625857.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460283|gb|EAW41376.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 378
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E + R Q++ L D INIQFTSGTTG+PK A L+H N++NN G ++ + +
Sbjct: 7 EDNARLAQLAAELRPDDAINIQFTSGTTGNPKGATLSHCNILNNGYLTGAAMDLSPRE-R 65
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + VP++H FG + +L + HG+T V P F +D+L+A +E+C
Sbjct: 66 LCIPVPLYHCFGMVLSVLACVAHGATMVFPGEDFDSLDTLKAAEEERC 113
>gi|423293328|ref|ZP_17271455.1| hypothetical protein HMPREF1070_00120 [Bacteroides ovatus
CL03T12C18]
gi|392678271|gb|EIY71679.1| hypothetical protein HMPREF1070_00120 [Bacteroides ovatus
CL03T12C18]
Length = 549
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 181 ELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 279
>gi|53715745|ref|YP_101737.1| AMP-binding protein [Bacteroides fragilis YCH46]
gi|375360510|ref|YP_005113282.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides fragilis
638R]
gi|52218610|dbj|BAD51203.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis YCH46]
gi|301165191|emb|CBW24761.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides fragilis
638R]
Length = 549
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 181 ELKSQVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKFTGND-KLCCCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KEKC
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKEKC 279
>gi|336411658|ref|ZP_08592120.1| hypothetical protein HMPREF1018_04138 [Bacteroides sp. 2_1_56FAA]
gi|383119765|ref|ZP_09940503.1| hypothetical protein BSHG_3415 [Bacteroides sp. 3_2_5]
gi|423252281|ref|ZP_17233275.1| hypothetical protein HMPREF1066_04285 [Bacteroides fragilis
CL03T00C08]
gi|423252870|ref|ZP_17233801.1| hypothetical protein HMPREF1067_00445 [Bacteroides fragilis
CL03T12C07]
gi|423259833|ref|ZP_17240756.1| hypothetical protein HMPREF1055_03033 [Bacteroides fragilis
CL07T00C01]
gi|423267488|ref|ZP_17246469.1| hypothetical protein HMPREF1056_04156 [Bacteroides fragilis
CL07T12C05]
gi|423271945|ref|ZP_17250914.1| hypothetical protein HMPREF1079_03996 [Bacteroides fragilis
CL05T00C42]
gi|423276051|ref|ZP_17254994.1| hypothetical protein HMPREF1080_03647 [Bacteroides fragilis
CL05T12C13]
gi|423282775|ref|ZP_17261660.1| hypothetical protein HMPREF1204_01198 [Bacteroides fragilis HMW
615]
gi|335940838|gb|EGN02701.1| hypothetical protein HMPREF1018_04138 [Bacteroides sp. 2_1_56FAA]
gi|382973086|gb|EES85089.2| hypothetical protein BSHG_3415 [Bacteroides sp. 3_2_5]
gi|387775871|gb|EIK37975.1| hypothetical protein HMPREF1055_03033 [Bacteroides fragilis
CL07T00C01]
gi|392647554|gb|EIY41253.1| hypothetical protein HMPREF1066_04285 [Bacteroides fragilis
CL03T00C08]
gi|392659116|gb|EIY52745.1| hypothetical protein HMPREF1067_00445 [Bacteroides fragilis
CL03T12C07]
gi|392696300|gb|EIY89496.1| hypothetical protein HMPREF1079_03996 [Bacteroides fragilis
CL05T00C42]
gi|392696962|gb|EIY90149.1| hypothetical protein HMPREF1056_04156 [Bacteroides fragilis
CL07T12C05]
gi|392699329|gb|EIY92508.1| hypothetical protein HMPREF1080_03647 [Bacteroides fragilis
CL05T12C13]
gi|404582343|gb|EKA87038.1| hypothetical protein HMPREF1204_01198 [Bacteroides fragilis HMW
615]
Length = 558
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 190 ELKSQVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKFTGND-KLCCCVPL 248
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KEKC
Sbjct: 249 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKEKC 288
>gi|336260717|ref|XP_003345152.1| hypothetical protein SMAC_07441 [Sordaria macrospora k-hell]
gi|380096500|emb|CCC06548.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 580
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H ++ L C N+QFTSGTTG PKAA LTH+N++NNS FIG R++ D +
Sbjct: 196 HHMERKVLPHLVC----NLQFTSGTTGLPKAAMLTHHNIVNNSRFIGDRMKLGP-DDVLC 250
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G+++ + HG V PA F +L+AI E+C
Sbjct: 251 CPPPLFHCFGLVLGLMSVITHGGKIVYPAEIFDAPATLKAIVDERC 296
>gi|387894427|ref|YP_006324724.1| acyl-CoA synthetase [Pseudomonas fluorescens A506]
gi|387164625|gb|AFJ59824.1| acyl-CoA synthetase [Pseudomonas fluorescens A506]
Length = 496
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE + R+ SL+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVPPEQLQSRQ---ASLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+E+
Sbjct: 221 ESLGLTAGD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLSAVAEEQ 277
>gi|374620358|ref|ZP_09692892.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374303585|gb|EHQ57769.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 560
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG+PK A L+H N++NN G+ + D K+ + VP++H FG +
Sbjct: 204 DAINIQFTSGTTGNPKGATLSHCNILNNGYLTGEAMRLTPAD-KLCIPVPLYHCFGMVLA 262
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L ++HGST V P +F P +L+ + E+C
Sbjct: 263 VLACISHGSTMVFPGEAFDPEQTLQTVQDEQC 294
>gi|322707699|gb|EFY99277.1| hypothetical protein MAA_05335 [Metarhizium anisopliae ARSEF 23]
Length = 576
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+N+QFTSGTTG PKAA LTH+NL+NNS FIG R+ D + PMFH FG +G+L
Sbjct: 206 VNLQFTSGTTGLPKAAMLTHHNLVNNSRFIGDRMRITAED-ILCCPPPMFHCFGLVLGLL 264
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG V PA F +L+AI+ E C
Sbjct: 265 AIVTHGGKIVYPAEVFDIPSTLQAISDEGC 294
>gi|153805881|ref|ZP_01958549.1| hypothetical protein BACCAC_00120 [Bacteroides caccae ATCC 43185]
gi|423219667|ref|ZP_17206163.1| hypothetical protein HMPREF1061_02936 [Bacteroides caccae
CL03T12C61]
gi|149130558|gb|EDM21764.1| AMP-binding domain protein [Bacteroides caccae ATCC 43185]
gi|392624872|gb|EIY18950.1| hypothetical protein HMPREF1061_02936 [Bacteroides caccae
CL03T12C61]
Length = 549
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 181 ELKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VERFDPLVVLASIHKERC 279
>gi|395649590|ref|ZP_10437440.1| AMP-binding domain protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 544
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE R+ SL+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGIPPEQLHNRQ---ASLHVDQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+E+
Sbjct: 221 ESLGLTAQD-RLVVPVPLYHCFGMVMGNLGCITHGTTLIYPNDGFDPLLTLTAVAEER 277
>gi|386714460|ref|YP_006180783.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
gi|384074016|emb|CCG45509.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
Length = 546
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ + E+ +SL+ +D IN+Q+TSGTTG PK L+HYN++NN N
Sbjct: 160 GCYTWNDLIDMGRSTSDEKLEERKRSLSYQDVINMQYTSGTTGFPKGVMLSHYNIVNNGN 219
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + D ++ + VP FH FG +G L A++ G+T V+ F+P+ L+A+ +E
Sbjct: 220 QVADCMRLTNED-RLCIPVPFFHCFGCVLGTLAAVSKGATMVI-LEQFEPLQVLKAVKEE 277
Query: 182 KC 183
C
Sbjct: 278 AC 279
>gi|399022746|ref|ZP_10724815.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
gi|398084166|gb|EJL74862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
Length = 539
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I ++ D +NIQ+TSGTTG PK L+H+N++NN FIG RL + + D ++ + VP +
Sbjct: 173 IEDKVDFDDPVNIQYTSGTTGFPKGVTLSHHNILNNGYFIGIRLNYTEKD-RVCIPVPFY 231
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G + HG+ V+P SF P +L+ ++ EKC
Sbjct: 232 HCFGMVIGNICCTVHGACIVIPNDSFDPDITLKVVSDEKC 271
>gi|392549460|ref|ZP_10296597.1| AMP-binding domain protein [Pseudoalteromonas rubra ATCC 29570]
Length = 567
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I L+ D INIQFTSGTTG+PK A LTH N++NN+N + + ++ + D K+ + VP++
Sbjct: 203 IEARLSPNDAINIQFTSGTTGNPKGATLTHRNILNNANLVAQTMQLTEQD-KLCIPVPLY 261
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L ++ G+ V P +F P +L+ + E+C
Sbjct: 262 HCFGMVLGNLVCLSQGACAVFPNDAFDPFLTLQTVEAEQC 301
>gi|118578913|ref|YP_900163.1| AMP-binding domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501623|gb|ABK98105.1| AMP-dependent synthetase and ligase [Pelobacter propionicus DSM
2379]
Length = 568
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L D IN+Q+TSGTTG PK L+ N++NN +IG+R +F K D +I L VP+FH
Sbjct: 190 EGLVADDVINMQYTSGTTGFPKGVMLSSRNILNNGYYIGERQKFTKMD-RICLPVPLFHC 248
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G++ + HGST V+ F P+ +L A+ KEKC
Sbjct: 249 FGCVLGVMAMLTHGSTLVM-LEIFDPLMALAAVQKEKC 285
>gi|336323033|ref|YP_004603000.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336106614|gb|AEI14432.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 552
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150
+D IN+Q+TSGTTG PK LTH+NL+NN+ IG+ + F D ++ + VP FH FG +
Sbjct: 192 QDVINMQYTSGTTGFPKGVMLTHHNLLNNAYAIGQCMRFSDKD-RLCIPVPFFHCFGLVL 250
Query: 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
IL HG+ ++P SF P++ L+++ +EKC
Sbjct: 251 SILVCQTHGA-AMIPVESFNPLEVLKSVEREKC 282
>gi|304314798|ref|YP_003849945.1| acyl-CoA synthetase [Methanothermobacter marburgensis str. Marburg]
gi|302588257|gb|ADL58632.1| acyl-CoA synthetase [Methanothermobacter marburgensis str. Marburg]
Length = 549
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L D IN+Q+TSGTTG PK LTH N++NN +IG+R +F + D ++ L VP+F
Sbjct: 182 VMSTLKNTDVINMQYTSGTTGFPKGVMLTHRNILNNGYYIGERQKFTEED-RLCLPVPLF 240
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G+L + HG T V+ F P+ L A+ KE+C
Sbjct: 241 HCFGIVLGVLAILTHGGTLVM-IELFDPLLVLAAVEKERC 279
>gi|281202244|gb|EFA76449.1| 4-coumarate-CoA ligase [Polysphondylium pallidum PN500]
Length = 562
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I++ C + INIQFTSGTTG+PK+A LTH N++NN+ F+ + L+ + D + + VP++
Sbjct: 210 IARQNRCEEPINIQFTSGTTGNPKSATLTHKNIVNNALFMTRTLKMSEVD-AMCIPVPLY 268
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG M +L + G+ V P +F P +L A+ KE+C
Sbjct: 269 HCFGMVMSVLVCVMVGAKLVFPGEAFDPKQTLAAVEKERC 308
>gi|242277631|ref|YP_002989760.1| AMP-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242120525|gb|ACS78221.1| AMP-dependent synthetase and ligase [Desulfovibrio salexigens DSM
2638]
Length = 548
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +++++ + E +L+ D +N+Q+TSGTTG PK LTHYN+ NN
Sbjct: 163 GMYSMAEVINLSAVTTEDDYEARQATLDPHDVVNMQYTSGTTGFPKGVQLTHYNIGNNGF 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG+ F D ++ L VP+FH FG +G+L A+NHG+T V+ F P+ + ++ +E
Sbjct: 223 WIGENQGFKPGD-RLCLPVPLFHCFGCVLGVLAAVNHGTTMVI-LEGFDPLLVMASVDQE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|339501010|ref|YP_004699045.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338835359|gb|AEJ20537.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 556
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E K L C+D IN+Q+TSGTTG PK LTH N++NN F+ + F D ++ + VP
Sbjct: 186 EAAKKELTCQDVINMQYTSGTTGFPKGVMLTHRNILNNGYFVAESQRFGP-DERLCVPVP 244
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG M +L + HG T V+ SF P+ L ++ E+C
Sbjct: 245 LFHCFGCVMAVLGTLTHGGTLVM-LESFDPLLVLASVQNERC 285
>gi|121607355|ref|YP_995162.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
gi|121551995|gb|ABM56144.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
Length = 576
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 42 PSAYKADALP-----TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINI 96
P +A LP ++ R A + G F + AGP R I L+ D INI
Sbjct: 166 PGKLQAKRLPELRSVVQMGRCA-QPGMFSFEQLQSLAGPAQINRLSLIESQLDAHDAINI 224
Query: 97 QFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156
QFTSGTTG PK A LTH+N++NN+ F+ + +D ++ + VP++H FG + +L A
Sbjct: 225 QFTSGTTGQPKGATLTHHNVVNNARFVAHAMRLGPSD-RLCVPVPLYHCFGMVLAVLAAT 283
Query: 157 NHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ S V P SF +L A+A E+C
Sbjct: 284 STASCLVFPGESFDAAATLAAVATERC 310
>gi|359777990|ref|ZP_09281264.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
gi|359304844|dbj|GAB15093.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
Length = 557
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 67 SDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR 126
+++++ A H + L+ D IN+Q+TSGTTG PK A LTH+N++NN IG+
Sbjct: 177 AELLKQADAVGHSELKARMAGLDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYSIGEL 236
Query: 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
L + + D ++++ VP +H FG +G LNA++HG+ T++P F P +L A+
Sbjct: 237 LNYTEHD-RVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFTPAAALEAV 287
>gi|426408677|ref|YP_007028776.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
gi|426266894|gb|AFY18971.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
Length = 565
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+ H R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 196 QLHERQ----NSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-R 250
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG MG L + HGST + P +F P+ +L +A EK
Sbjct: 251 LVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLGTVADEK 297
>gi|398959911|ref|ZP_10678305.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398144648|gb|EJM33470.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 564
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
+ H R+ SL+ +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 196 QLHERQ----NSLHFDQPVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLTAAD-R 250
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG MG L + HGST + P +F P+ +L +A EK
Sbjct: 251 LVIPVPLYHCFGMVMGNLGCITHGSTMIYPNDAFDPLLTLGTVADEK 297
>gi|51245054|ref|YP_064938.1| acyl-CoA synthetase [Desulfotalea psychrophila LSv54]
gi|50876091|emb|CAG35931.1| probable long-chain fatty-acid-CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 568
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
R +IS +L+ D INIQ+TSGTTG PKA LTH+N++NN+ F + L + D ++ +
Sbjct: 198 ERLNEISGALDRDDPINIQYTSGTTGFPKAVALTHHNILNNAWFSAQALHLTEAD-RLCV 256
Query: 139 QVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP +H FGT + L ++ G+ V+PA F + +L+AI +E C
Sbjct: 257 PVPFYHCFGTVLANLLCLSVGACIVIPAEHFDALATLKAIEEESC 301
>gi|262384721|ref|ZP_06077854.1| acyl-CoA synthetase [Bacteroides sp. 2_1_33B]
gi|262293702|gb|EEY81637.1| acyl-CoA synthetase [Bacteroides sp. 2_1_33B]
Length = 549
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP
Sbjct: 180 EAAKARVNCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 LFHCFGVVLASMNVLTHGCTQVM-VEKFDPLLVLASIHKERC 279
>gi|301312271|ref|ZP_07218188.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|423337645|ref|ZP_17315389.1| hypothetical protein HMPREF1059_01314 [Parabacteroides distasonis
CL09T03C24]
gi|300829693|gb|EFK60346.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|409236909|gb|EKN29713.1| hypothetical protein HMPREF1059_01314 [Parabacteroides distasonis
CL09T03C24]
Length = 549
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP
Sbjct: 180 EAAKARVNCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 LFHCFGVVLASMNVLTHGCTQVM-VEKFDPLLVLASIHKERC 279
>gi|308179067|ref|YP_003918473.1| fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
gi|307746530|emb|CBT77502.1| putative fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG+PK A L+H N++NN + ++ D+ D ++ + VP +H FG MG
Sbjct: 181 DPINIQYTSGTTGYPKGAVLSHRNILNNGYQVTGMIDLDEHD-RLCIPVPFYHCFGMVMG 239
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + G+T V+PAP F +LR +A+E C
Sbjct: 240 NLGCTSRGTTIVIPAPGFDAETTLRVVAEEHC 271
>gi|255016217|ref|ZP_05288343.1| AMP-binding domain protein [Bacteroides sp. 2_1_7]
gi|256842369|ref|ZP_05547872.1| dicarboxylate-CoA ligase PimA [Parabacteroides sp. D13]
gi|298377850|ref|ZP_06987800.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|410105206|ref|ZP_11300115.1| hypothetical protein HMPREF0999_03887 [Parabacteroides sp. D25]
gi|423334186|ref|ZP_17311967.1| hypothetical protein HMPREF1075_03618 [Parabacteroides distasonis
CL03T12C09]
gi|256735976|gb|EEU49307.1| dicarboxylate-CoA ligase PimA [Parabacteroides sp. D13]
gi|298265296|gb|EFI06959.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|409225949|gb|EKN18863.1| hypothetical protein HMPREF1075_03618 [Parabacteroides distasonis
CL03T12C09]
gi|409232748|gb|EKN25591.1| hypothetical protein HMPREF0999_03887 [Parabacteroides sp. D25]
Length = 549
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP
Sbjct: 180 EAAKARVNCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 LFHCFGVVLASMNVLTHGCTQVM-VEKFDPLLVLASIHKERC 279
>gi|189465236|ref|ZP_03014021.1| hypothetical protein BACINT_01581 [Bacteroides intestinalis DSM
17393]
gi|189437510|gb|EDV06495.1| AMP-binding domain protein [Bacteroides intestinalis DSM 17393]
Length = 548
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ + VP+F
Sbjct: 181 LKSQVTCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGYLTGEHMKFTAND-KLCVCVPLF 239
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 HCFGVVLATMNCLTHGCTEVM-VERFNPLVVLASIHKERC 278
>gi|395495059|ref|ZP_10426638.1| AMP-binding domain protein [Pseudomonas sp. PAMC 25886]
Length = 545
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE R+ SL+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVAPEQLHTRQ---ASLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+E+
Sbjct: 221 ESLGLTAQD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAEEQ 277
>gi|150009364|ref|YP_001304107.1| AMP-binding protein [Parabacteroides distasonis ATCC 8503]
gi|149937788|gb|ABR44485.1| putative long-chain-fatty-acid--CoA ligase [Parabacteroides
distasonis ATCC 8503]
Length = 549
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E +NC D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP
Sbjct: 180 EAAKARVNCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCCCVP 238
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 LFHCFGVVLASMNVLTHGCTQVM-VEKFDPLLVLASIHKERC 279
>gi|393718188|ref|ZP_10338115.1| AMP-binding domain protein [Sphingomonas echinoides ATCC 14820]
Length = 565
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G DI + H +++ + +NIQFTSGTTG PK L+H +++NN +
Sbjct: 172 GAVDFEDIEKRGVACGHTVLARVAAEVQFDAPVNIQFTSGTTGAPKGVVLSHASILNNGH 231
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F G+ + D ++ L VP++H FG G L + HG V+P P F P+ +L+A+A+E
Sbjct: 232 FTGRAMRLGAGD-RLCLPVPLYHCFGMVTGSLLCLAHGVAIVLPGPGFDPLATLQALAEE 290
Query: 182 KC 183
+C
Sbjct: 291 RC 292
>gi|197123507|ref|YP_002135458.1| AMP-binding domain-containing protein [Anaeromyxobacter sp. K]
gi|196173356|gb|ACG74329.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 546
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + L D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP
Sbjct: 173 RLERDLQFDDPINIQYTSGTTGFPKGATLSHHNIVNNGFFIGEFLRYTDAD-RVCIPVPF 231
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG + + HG+ V+P +F P+ +R + +E+C
Sbjct: 232 YHCFGMVLANMAITTHGAAMVIPLDNFDPLTVMRTVQQERC 272
>gi|104782040|ref|YP_608538.1| acyl-CoA synthetase [Pseudomonas entomophila L48]
gi|95111027|emb|CAK15747.1| long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila L48]
Length = 556
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ + INIQ+TSGTTG PK A L+H+N++NN +G+ L + D ++++ VP++H F
Sbjct: 197 SLHRHEPINIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTEHD-RLVVPVPLYHCF 255
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G M L M HGST + P +F P+ +L+A+A+E+
Sbjct: 256 GMVMANLGCMTHGSTLIYPNDAFDPLLTLQAVAEER 291
>gi|146283536|ref|YP_001173689.1| AMP-binding protein [Pseudomonas stutzeri A1501]
gi|145571741|gb|ABP80847.1| probable AMP-binding enzyme [Pseudomonas stutzeri A1501]
Length = 560
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L ++ + GPE R Q + L D INIQ+TSGTTG PK A L+HYN++NN +G+
Sbjct: 179 LMEMAEQVGPEQLR---QCGERLQFDDPINIQYTSGTTGFPKGATLSHYNILNNGYMVGE 235
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171
L + D ++++ VP++H FG MG L + HG+T + P+ +F P
Sbjct: 236 SLRLTEHD-RLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPSAAFDP 280
>gi|302392636|ref|YP_003828456.1| AMP-dependent synthetase and ligase [Acetohalobium arabaticum DSM
5501]
gi|302204713|gb|ADL13391.1| AMP-dependent synthetase and ligase [Acetohalobium arabaticum DSM
5501]
Length = 554
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +DIM+ + + + SLN D IN+Q+TSGTTG PK LTH N+I ++N
Sbjct: 161 GMYHWNDIMELGKQASNVKLRKRQNSLNPDDVINMQYTSGTTGFPKGVMLTHTNIIADAN 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+I +EF D ++ + VP FH FG +G L + G+ T+VP FKP L I E
Sbjct: 221 YIADCMEFTNED-RLCIPVPFFHCFGCVLGTLVCVTKGA-TMVPIVKFKPEPVLETIEAE 278
Query: 182 KC 183
+C
Sbjct: 279 EC 280
>gi|220918306|ref|YP_002493610.1| AMP-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956160|gb|ACL66544.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + L D INIQ+TSGTTG PK A L+H+N++NN FIG+ L + D ++ + VP
Sbjct: 173 RLERDLQFDDPINIQYTSGTTGFPKGATLSHHNIVNNGFFIGEFLRYTDAD-RVCIPVPF 231
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG + + HG+ V+P +F P+ +R + +E+C
Sbjct: 232 YHCFGMVLANMAITTHGAAMVIPLDNFDPLTVMRTVQQERC 272
>gi|421749451|ref|ZP_16186888.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
gi|409771687|gb|EKN53910.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
Length = 563
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRREQISKSLNCR 91
++ +P +A LP + +RMG R ++++ + P+ R + I +L
Sbjct: 149 ADSQPGTLRAARLPA--LQWVVRMGEEDTAGMVRYAEVL--SAPDIARL-DAIGSALAPH 203
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQFTSGTTG+PK A LTH+N++NN ++ + + D + + VP++H FG +
Sbjct: 204 DPINIQFTSGTTGNPKGATLTHHNVVNNGRYVAMAMRLTERD-SLCIPVPLYHCFGMVLS 262
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L ++ G+ + P +F P+ +++A+ +E+C
Sbjct: 263 VLACVSVGARMIFPGEAFDPLATMQAVHEERC 294
>gi|212638029|ref|YP_002314549.1| AMP-binding domain-containing protein [Anoxybacillus flavithermus
WK1]
gi|212559509|gb|ACJ32564.1| Acyl-CoA synthetase/AMP-acid ligase II [Anoxybacillus flavithermus
WK1]
Length = 546
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF D++ A + SL+ D IN+Q+TSGTTG PK LTHYN++NN+
Sbjct: 158 GTFSWHDLLAMAEYVEDAALDARMNSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAY 217
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+I + ++ K D ++ + VP FH FG +G L + G+ T+VP F P L+ + E
Sbjct: 218 YIAECMKLTKED-RLCIPVPFFHCFGCVLGTLACVTVGA-TMVPLEQFHPKQVLQTVQDE 275
Query: 182 KC 183
KC
Sbjct: 276 KC 277
>gi|334345488|ref|YP_004554040.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102110|gb|AEG49534.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 555
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L+ D IN+QFTSGTTG PK A LTH N++NN++F G+ + D +I + VP++
Sbjct: 182 LEAALSPDDAINVQFTSGTTGFPKGATLTHRNILNNAHFTGRTINLTNAD-RICIPVPLY 240
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L A+ G+ V P ++ P L+AI E C
Sbjct: 241 HCFGMVLGNLAALTSGAAMVYPGEAYDPTLVLQAIEAEGC 280
>gi|413964113|ref|ZP_11403340.1| AMP-binding domain protein [Burkholderia sp. SJ98]
gi|413929945|gb|EKS69233.1| AMP-binding domain protein [Burkholderia sp. SJ98]
Length = 576
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 20/158 (12%)
Query: 38 SNPRPSAYKADALPTKLTRLALRMG------TFRLSDIMQGAGPEYHRRR------EQIS 85
++ P+A A LP R +RMG D+M+ R R + +
Sbjct: 158 AHAEPNALHAANLPE--LRAVIRMGESKTPGMLNFEDVMRTG-----RERLDATPLDAVE 210
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
L D INIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H
Sbjct: 211 AKLKPDDPINIQFTSGTTGNPKGATLTHRNIVNNARYIAMAMRLTEQD-SLCIPVPLYHC 269
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + +L ++ G T V P +F P +L A+ +EKC
Sbjct: 270 FGMVLAVLACVSTGCTMVFPGEAFDPAATLAAVHEEKC 307
>gi|187925861|ref|YP_001897503.1| AMP-binding domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717055|gb|ACD18279.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 576
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ I +L+C + INIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP
Sbjct: 207 DAIGATLSCHEPINIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMRLSEQD-GLCIPVP 265
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG + +L ++ G+ V P F P +L A+A+E+C
Sbjct: 266 LYHCFGMVLAVLACVSVGAKMVFPGEGFDPAATLAAVAEEQC 307
>gi|380486480|emb|CCF38673.1| AMP-binding enzyme [Colletotrichum higginsianum]
Length = 575
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH+N++NN+ FIG R+ D + P+FH FG +G+L+
Sbjct: 206 NLQFTSGTTGRPKAAMLTHHNVVNNARFIGDRMRLSPED-VLCCPPPLFHCFGLVLGLLS 264
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V PA F +L+AI +E C
Sbjct: 265 VITHGAKIVYPAEVFDTKATLKAILEEDC 293
>gi|313149254|ref|ZP_07811447.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis 3_1_12]
gi|313138021|gb|EFR55381.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis 3_1_12]
Length = 549
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 178 RLNGLKACVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TADDKLCCC 236
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 237 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 279
>gi|423280901|ref|ZP_17259813.1| hypothetical protein HMPREF1203_04030 [Bacteroides fragilis HMW
610]
gi|404583542|gb|EKA88220.1| hypothetical protein HMPREF1203_04030 [Bacteroides fragilis HMW
610]
Length = 563
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 192 RLNGLKACVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TADDKLCCC 250
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 251 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 293
>gi|424665552|ref|ZP_18102588.1| hypothetical protein HMPREF1205_01427 [Bacteroides fragilis HMW
616]
gi|404574553|gb|EKA79303.1| hypothetical protein HMPREF1205_01427 [Bacteroides fragilis HMW
616]
Length = 561
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R + ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+
Sbjct: 190 RLNGLKACVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TADDKLCCC 248
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 249 VPLFHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 291
>gi|256392289|ref|YP_003113853.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256358515|gb|ACU72012.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 550
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D ++IQ+TSGTTG PK A L+H N++ N + + + D ++ L VP++H FG
Sbjct: 187 LHPDDPMDIQYTSGTTGFPKGATLSHRNVLGNGYMVAEVQGWTHED-RVCLPVPLYHCFG 245
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
MG L A +HGS V+P P F P D+LRA+++E C
Sbjct: 246 MVMGNLGATSHGSCMVLPGPLFDPADTLRAVSEEHC 281
>gi|198276652|ref|ZP_03209183.1| hypothetical protein BACPLE_02848 [Bacteroides plebeius DSM 17135]
gi|198270177|gb|EDY94447.1| AMP-binding domain protein [Bacteroides plebeius DSM 17135]
Length = 303
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
K ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ + VP+FH
Sbjct: 185 KLVSCHDTVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKF-TADDKLCVCVPLFHC 243
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 244 FGVVLATMNCLTHGCTQVM-IERFDPLLVLASIHKERC 280
>gi|15678684|ref|NP_275799.1| AMP-binding protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|2621739|gb|AAB85162.1| long-chain-fatty-acid-CoA ligase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 548
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ +L D IN+Q+TSGTTG PK LTH N++NN +IG+R F + D ++ L VP+F
Sbjct: 182 VMSTLKNTDVINMQYTSGTTGFPKGVMLTHRNILNNGYYIGERQRFTEED-RLCLPVPLF 240
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G+L + HG T V+ F P+ L A+ KE+C
Sbjct: 241 HCFGIVLGVLALLTHGGTLVM-IELFDPLLVLAAVEKERC 279
>gi|307352961|ref|YP_003894012.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
gi|307156194|gb|ADN35574.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
Length = 565
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L D INIQ+TSGTTG+PK LTH+N++NN IG ++F + D ++ + VP +H FG
Sbjct: 197 LTFDDPINIQYTSGTTGYPKGVVLTHHNVVNNGYTIGNGMKFTEKD-RLCIPVPFYHCFG 255
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ + HGST V+P+P+F L+ I +EKC
Sbjct: 256 MVLSNFACVTHGSTMVLPSPAFDAETVLKTIDEEKC 291
>gi|160933696|ref|ZP_02081084.1| hypothetical protein CLOLEP_02557 [Clostridium leptum DSM 753]
gi|156867573|gb|EDO60945.1| AMP-binding enzyme [Clostridium leptum DSM 753]
Length = 843
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +RR I+K C N+Q+TSGTTG PK LTHYN++NN IG ++ D +
Sbjct: 468 EVYRRAAAINKHDVC----NMQYTSGTTGFPKGVMLTHYNVVNNGKAIGDCMDLSTAD-R 522
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++QVPMFH FG + + +M HG T+ P P+F P L I +EK
Sbjct: 523 MMIQVPMFHCFGMVLAMTASMTHG-VTMSPIPAFSPKKGLACINQEK 568
>gi|319900778|ref|YP_004160506.1| AMP-dependent synthetase and ligase [Bacteroides helcogenes P
36-108]
gi|319415809|gb|ADV42920.1| AMP-dependent synthetase and ligase [Bacteroides helcogenes P
36-108]
Length = 548
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ + C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ + VP+
Sbjct: 180 KLKNLVTCHDVVNMQYTSGTTGFPKGVMLTHYNITNNGYLTGEHMKF-TADDKLCVCVPL 238
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 FHCFGVVLATMNCLTHGCTEVM-VERFDPLVVLASIHKERC 278
>gi|407701339|ref|YP_006826126.1| AMP-binding protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250486|gb|AFT79671.1| AMP-binding domain protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 579
Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
I L+ D INIQFTSGTTG+PK A LTH N++NN + + + F D K+ + VP++
Sbjct: 210 IESKLSPDDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQAMRFTHKD-KLCIPVPLY 268
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG +G L + G+ V P SF P +LR + +EKC
Sbjct: 269 HCFGMVLGNLVCLASGACAVFPGESFDPETTLRTVEEEKC 308
>gi|336326225|ref|YP_004606191.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336102207|gb|AEI10027.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 549
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 56 RLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN 115
R + G+ R +++ A + + RE++ + D IN+Q+TSGTTG K A LTH N
Sbjct: 155 REVIYFGSERWNELSNHAILDLNAVREELEPN----DAINLQYTSGTTGLAKGATLTHRN 210
Query: 116 LINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175
++NN +G+RL + D ++++ VP FH FG MG + A +HG+TT++ P F P +L
Sbjct: 211 ILNNGYMVGERLRYTDQD-RVVIPVPFFHCFGMVMGNIAAFSHGATTIITGPVFSPRATL 269
Query: 176 RAI 178
A+
Sbjct: 270 EAV 272
>gi|307172749|gb|EFN64035.1| Acyl-CoA synthetase family member 2, mitochondrial [Camponotus
floridanus]
Length = 396
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Query: 54 LTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTH 113
L RL + GT R +D+ A ++C DG NI FTSG+TG KA L+H
Sbjct: 3 LVRL-IYSGTHRFADVEASATKAEVDAIAAEQAEISCNDGCNILFTSGSTGKSKATLLSH 61
Query: 114 YNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMD 173
+++NNS R + + T++KI L +P FH FG M + ++ GST V+ SF P+
Sbjct: 62 RSIVNNSKENACRAKIN-TENKICLNIPFFHAFGFIMANILILHTGSTLVIEERSFDPIK 120
Query: 174 SLRAIAKEKC 183
SL+AIA+EKC
Sbjct: 121 SLKAIAQEKC 130
>gi|429851406|gb|ELA26596.1| 4-coumarate- ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 541
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH+N++NN+ FIG R+ D + P+FH FG +G+L+
Sbjct: 206 NLQFTSGTTGRPKAAMLTHHNVVNNARFIGDRMRL-TPDDCLCCPPPLFHCFGLVLGLLS 264
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V PA F +L+AI +E C
Sbjct: 265 VITHGAKIVYPAEVFDTKATLKAILEEDC 293
>gi|116671612|ref|YP_832545.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
gi|116611721|gb|ABK04445.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
Length = 558
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ +D IN+Q+TSGTTG PK A LTH N++NN IG+ L + + D ++++ VP +H FG
Sbjct: 198 LDPQDPINLQYTSGTTGFPKGATLTHRNILNNGYSIGELLGYTEHD-RVVIPVPFYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
+G LNA++HG+ T++P +F P +L A+
Sbjct: 257 MVIGNLNALSHGAATIIPGRTFTPAAALEAV 287
>gi|440637807|gb|ELR07726.1| hypothetical protein GMDG_08523 [Geomyces destructans 20631-21]
Length = 534
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+Q+TSG+TG PKAA LTH+N+INN++ IG R+ F TD + P+FH FG +G+L
Sbjct: 162 NLQYTSGSTGQPKAAMLTHHNMINNAHSIGHRMSFTPTD-ILCCPPPLFHCFGLVLGLLV 220
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HGST V+P+PSF L AIA E C
Sbjct: 221 CITHGSTIVLPSPSFSARAVLAAIAAENC 249
>gi|254250970|ref|ZP_04944288.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
gi|124893579|gb|EAY67459.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
Length = 575
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ I +L D INIQFTSGTTG PK A LTH N++NN+ I + + F + D + + VP
Sbjct: 206 DAIGATLASTDPINIQFTSGTTGSPKGATLTHRNVVNNARSIARAMRFTEHD-SLCIPVP 264
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG + +L ++ G+ V P +F P+ +L A+A+E+C
Sbjct: 265 LYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATLAAVAEERC 306
>gi|60683679|ref|YP_213823.1| AMP-binding protein [Bacteroides fragilis NCTC 9343]
gi|60495113|emb|CAH09932.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides fragilis
NCTC 9343]
Length = 549
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F D K+ VP+
Sbjct: 181 ELKSQVDCHDVVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKFTGND-KLCCCVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 240 FHCFGVVLATMNCLTHGCTQVM-VERFDPLIVLASIHKERC 279
>gi|119775039|ref|YP_927779.1| AMP-binding protein [Shewanella amazonensis SB2B]
gi|119767539|gb|ABM00110.1| AMP-binding family protein [Shewanella amazonensis SB2B]
Length = 573
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK 131
G+ EY + IS+ L+ D INIQFTSGTTG+PK A L+H+N++NN + K + F
Sbjct: 196 GSDAEY-ADLQGISEKLSPFDPINIQFTSGTTGNPKGATLSHHNILNNGMLVAKGMRFSH 254
Query: 132 TDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
D ++ + VP++H FG +G L + G+T V P +F P +L + KE C
Sbjct: 255 LD-RLCIPVPLYHCFGMVLGNLVCVATGATAVFPGDAFDPATTLAVVEKEHC 305
>gi|410660793|ref|YP_006913164.1| Long-chain-fatty-acid--CoA ligase [Dehalobacter sp. CF]
gi|409023149|gb|AFV05179.1| Long-chain-fatty-acid--CoA ligase [Dehalobacter sp. CF]
Length = 844
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 6/111 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +RR + SLN D N+Q+TSGTTG PK LTHYN++NN IG ++ D +
Sbjct: 469 EVYRR----ALSLNRHDVCNMQYTSGTTGFPKGVMLTHYNVVNNGKNIGDCMDLSTAD-R 523
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186
+++ VPMFH FG + + +M HG T+ P P+F P SL I +EK +
Sbjct: 524 MMIHVPMFHCFGMVLAMTASMTHG-VTMSPIPAFSPKISLDCINREKITAF 573
>gi|410643146|ref|ZP_11353648.1| fatty-acyl-CoA synthase [Glaciecola chathamensis S18K6]
gi|410137324|dbj|GAC11835.1| fatty-acyl-CoA synthase [Glaciecola chathamensis S18K6]
Length = 564
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 62 GTFRLSDIMQGAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120
G +D+ Q G E R++ ++ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYADVSQ-MGTEAQRQQLVTLANQLLPDDPINIQFTSGTTGQPKGATLTHCNILNNG 231
Query: 121 NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAK 180
G+ + +D ++ + VP++H FG +G L+ + HG+T + P +F + +L+ + K
Sbjct: 232 FLAGEGMRLSPSD-RVCIPVPLYHCFGMVLGNLSCIAHGATMIYPNDAFDALTTLQVVEK 290
Query: 181 EKC 183
E+C
Sbjct: 291 ERC 293
>gi|239918243|ref|YP_002957801.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|281415565|ref|ZP_06247307.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|239839450|gb|ACS31247.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
Length = 592
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +N+Q+TSGTTG PK LTH N++NN IG+ L + + D +++ VP FH FG +G
Sbjct: 220 DPVNLQYTSGTTGFPKGVTLTHRNVLNNGFHIGELLGYTEED-TVVIPVPFFHCFGMVIG 278
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIA 179
++ ++HGS V+PA SF+P+ +LRA+A
Sbjct: 279 VIATVSHGSLAVIPARSFEPVSALRAVA 306
>gi|423692301|ref|ZP_17666821.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
gi|387999829|gb|EIK61158.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
Length = 543
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE R+ L+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVSPEQLHSRQ---ARLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+EK
Sbjct: 221 ESLGLTAGD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLSAVAEEK 277
>gi|365155083|ref|ZP_09351476.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
gi|363628799|gb|EHL79508.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
Length = 546
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
S+SL+ D IN+Q+TSGTTG PK LTHYNL+NN+ I + ++ K D ++ + VP FH
Sbjct: 184 SRSLHPDDVINMQYTSGTTGFPKGVMLTHYNLVNNARNIAECMKLTK-DDRLCIPVPFFH 242
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G L +++ G+ T+VP F P L+ + KEKC
Sbjct: 243 CFGCVIGTLASVSVGA-TMVPVQEFDPEAVLQTVEKEKC 280
>gi|449543812|gb|EMD34787.1| hypothetical protein CERSUDRAFT_116973 [Ceriporiopsis subvermispora
B]
Length = 638
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
Query: 74 GPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTD 133
G E R R ++++ L+C D IN+QFTSGTTG PKA LTH+NL+NN+ IG+ + +D
Sbjct: 237 GSEAERVR-KVAEGLHCDDVINLQFTSGTTGAPKAVSLTHHNLLNNALSIGRCMRLTSSD 295
Query: 134 HKILLQV-PMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
I+ V P+FH FG +G L A HG++ V PA +F ++ A+ +E+C
Sbjct: 296 --IVCNVPPLFHCFGLVLGNLAAWAHGASIVYPAEAFNAHATVDALVEEQC 344
>gi|212694771|ref|ZP_03302899.1| hypothetical protein BACDOR_04304 [Bacteroides dorei DSM 17855]
gi|345516120|ref|ZP_08795613.1| acyl-CoA synthetase [Bacteroides dorei 5_1_36/D4]
gi|423227931|ref|ZP_17214337.1| hypothetical protein HMPREF1063_00157 [Bacteroides dorei
CL02T00C15]
gi|423239064|ref|ZP_17220180.1| hypothetical protein HMPREF1065_00803 [Bacteroides dorei
CL03T12C01]
gi|423243191|ref|ZP_17224267.1| hypothetical protein HMPREF1064_00473 [Bacteroides dorei
CL02T12C06]
gi|212662625|gb|EEB23199.1| AMP-binding enzyme [Bacteroides dorei DSM 17855]
gi|345455531|gb|EEO44189.2| acyl-CoA synthetase [Bacteroides dorei 5_1_36/D4]
gi|392637678|gb|EIY31544.1| hypothetical protein HMPREF1063_00157 [Bacteroides dorei
CL02T00C15]
gi|392646066|gb|EIY39785.1| hypothetical protein HMPREF1064_00473 [Bacteroides dorei
CL02T12C06]
gi|392647475|gb|EIY41176.1| hypothetical protein HMPREF1065_00803 [Bacteroides dorei
CL03T12C01]
Length = 551
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+FH FG
Sbjct: 188 VDCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDKLCVCVPLFHCFG 246
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 247 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 281
>gi|329962333|ref|ZP_08300338.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
gi|328530194|gb|EGF57075.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
Length = 548
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + ++I+ R +++ + C D N+Q+TSGTTG PK LTH+N+ NN
Sbjct: 159 GMYNTAEILLLGDNVEDSRLDELKSQVTCHDVANMQYTSGTTGFPKGVMLTHHNITNNGY 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ ++F D K+ + VP+FH FG + +N + HG T V+ F P+ L +I KE
Sbjct: 219 LTGEHMKF-TADDKLCVCVPLFHCFGVVLATMNCLTHGCTEVM-VERFDPLVVLASIHKE 276
Query: 182 KC 183
+C
Sbjct: 277 RC 278
>gi|265750546|ref|ZP_06086609.1| acyl-CoA synthetase [Bacteroides sp. 3_1_33FAA]
gi|263237442|gb|EEZ22892.1| acyl-CoA synthetase [Bacteroides sp. 3_1_33FAA]
Length = 550
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D K+ + VP+FH FG
Sbjct: 187 VDCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDKLCVCVPLFHCFG 245
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 246 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 280
>gi|410626717|ref|ZP_11337470.1| fatty-acyl-CoA synthase [Glaciecola mesophila KMM 241]
gi|410153818|dbj|GAC24239.1| fatty-acyl-CoA synthase [Glaciecola mesophila KMM 241]
Length = 566
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + Q G + I+ L D INIQFTSGTTG PK A LTH N++NN
Sbjct: 173 GMLNYERVTQMGGDAERNQMATITSQLLPDDPINIQFTSGTTGQPKGATLTHCNILNNGF 232
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G+ + +D ++ + VP++H FG +G L+ + HG+T + P +F + +L+ + KE
Sbjct: 233 LAGEGMRLSPSD-RVCIPVPLYHCFGMVLGNLSCIAHGATMIYPNDAFDALTTLQVVEKE 291
Query: 182 KC 183
+C
Sbjct: 292 RC 293
>gi|328852244|gb|EGG01391.1| hypothetical protein MELLADRAFT_79002 [Melampsora larici-populina
98AG31]
Length = 599
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
R +I ++L D IN+QFTSGTTG PKAA LTH+N++NN+ +G+R+ D ++
Sbjct: 216 RVNRIDETLLPDDVINLQFTSGTTGLPKAAALTHHNILNNAVQMGERMNLQPED-RVCNV 274
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G L++ HG+ V P+ F +LRAIA EKC
Sbjct: 275 PPLFHCFGLVIGNLSSWIHGARVVYPSEGFDAHATLRAIASEKC 318
>gi|220913513|ref|YP_002488822.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
gi|219860391|gb|ACL40733.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
Length = 558
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D +N+Q+TSGTTG PK A LTH+N++NN IG+ L + + D ++++ VP +H FG
Sbjct: 198 LDPHDPVNLQYTSGTTGFPKGATLTHHNILNNGFAIGELLGYTEHD-RVVIPVPFYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
+G LNA++HG+ T++P F P +L A+
Sbjct: 257 MVIGNLNALSHGAATIIPGRGFSPAAALEAV 287
>gi|169622284|ref|XP_001804551.1| hypothetical protein SNOG_14361 [Phaeosphaeria nodorum SN15]
gi|160704739|gb|EAT78232.2| hypothetical protein SNOG_14361 [Phaeosphaeria nodorum SN15]
Length = 446
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHY---------NLINNSNFIGKRLEFDKTDHKILLQVPM 142
D +N+QFTSG+TG+PKAA LTH NL+NNS FIG R++ D + P+
Sbjct: 73 DVVNLQFTSGSTGNPKAAMLTHQAAFTDLRYSNLVNNSRFIGDRMKLTPKD-TLCCPPPL 131
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G+L ++HG V PA SF P+ ++ AI E+C
Sbjct: 132 FHCFGLTLGVLATLSHGGKIVFPAESFDPVATMHAINDERC 172
>gi|73670286|ref|YP_306301.1| AMP-binding protein [Methanosarcina barkeri str. Fusaro]
gi|72397448|gb|AAZ71721.1| long-chain fatty-acid-CoA ligase [Methanosarcina barkeri str.
Fusaro]
Length = 552
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+I S++C D +N+Q+TSGTTG PK LTH N++NN IG R F D K+ VP+
Sbjct: 181 EIMTSVDCDDVVNMQYTSGTTGFPKGVMLTHKNILNNGLSIGDRQRFTYVD-KLCFPVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G++ + H +T V+ F P+ L A+ KEKC
Sbjct: 240 FHCFGIVLGVMAVLTHRATLVM-LEVFDPLLVLAAVHKEKC 279
>gi|87199710|ref|YP_496967.1| AMP-binding protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135391|gb|ABD26133.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 543
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGT 148
N D INIQFTSGTTG PK A LTH N++NN +F + ++ + D +I + VP++H FG
Sbjct: 184 NQNDAINIQFTSGTTGFPKGATLTHRNILNNGHFTARTIKLTQRD-RICIPVPLYHCFGM 242
Query: 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G L A+ G+ V P ++ P +L A+A+E C
Sbjct: 243 VLGNLAALASGAAMVYPGEAYDPQLALAAVAEEGC 277
>gi|374607539|ref|ZP_09680340.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555375|gb|EHP81945.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 1055
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
RL D P R R L D INIQ+TSGTTG PK A L+H N++NN F+
Sbjct: 675 RLRDRADQVSPAALRSR---MDGLAPGDPINIQYTSGTTGSPKGATLSHRNILNNGFFVT 731
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ ++ + ++ + VP +H FG MG L HG+T V+PA F P +L AI KE+C
Sbjct: 732 ELIKLGPGE-RLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAAGFDPAVTLEAIEKERC 789
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155
I +TSGTTG PK A LTH NL ++ L + D + P+FHT G + +
Sbjct: 169 IMYTSGTTGFPKGAVLTHRNLYLHAYSSIATLGYRDDDDCWMAVAPLFHTAGVSGMLPMF 228
Query: 156 MNHGSTTVVPAPSFKPMDSLRAIAKE 181
+N G+ + P+ F P + I E
Sbjct: 229 LNGGTAVIPPSGGFDPAAIVDTIVDE 254
>gi|218781112|ref|YP_002432430.1| AMP-binding domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762496|gb|ACL04962.1| AMP-dependent CoA ligase/synthetase [Desulfatibacillum alkenivorans
AK-01]
Length = 548
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + + +IM + + ++ +L+ D +N+Q+TSGTTG PK LTH+N+ NN
Sbjct: 163 GFYSIPEIMSLSVMTTDEQYKERQDALDPHDVVNMQYTSGTTGFPKGVMLTHFNIGNNGF 222
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+IG+ F + D ++ + VP+FH FG +G+L A+ HGS V+ F P+ + ++ +E
Sbjct: 223 WIGENQNFSEKD-RVCIPVPLFHCFGCVLGVLAAVTHGSAMVI-LEQFDPVQVMASVEEE 280
Query: 182 KC 183
KC
Sbjct: 281 KC 282
>gi|452975963|gb|EME75780.1| AMP-binding domain protein [Bacillus sonorensis L12]
Length = 545
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 39 NPRPSAYKADALPTKLTRLAL-----RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93
N + K+D LP L + L + G + D+++ A + E+ SLN D
Sbjct: 134 NSKAGELKSDRLPF-LKHIMLFGKNRKPGMYLWEDLLEKASLTSEKELEERMASLNEHDV 192
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
IN+Q+TSGTTG PK LTHYNL NN+ I + + D ++ + VP FH FG +G L
Sbjct: 193 INMQYTSGTTGFPKGVMLTHYNLANNAVNIAECMNLTAND-RMCIPVPFFHCFGCVLGNL 251
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ G+ T+VP F P + L+ + E+C
Sbjct: 252 ACVTVGA-TMVPVQEFSPREVLKTVESERC 280
>gi|374370611|ref|ZP_09628612.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373097896|gb|EHP39016.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 578
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 42 PSAYKADALPTKLTRLALRM------GTFRLSDI-MQGAGPEYHRRREQISKSLNCRDGI 94
P A +A L T R +RM G D+ +G G E + IS+ L+ D I
Sbjct: 165 PGALQAARLLT--LRWVIRMEDVPTPGMLTYRDVNARGVGVEV-SELDAISEKLDPHDPI 221
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG PK A LTH N+INN+ F+ + + D ++ + VP++H FG M +L
Sbjct: 222 NIQFTSGTTGAPKGATLTHRNIINNARFVSMAMNLQEQD-RLCIPVPLYHCFGMVMSVLV 280
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G+ + P +F P+ ++ A+++E+C
Sbjct: 281 CTITGACMIFPGEAFDPVATMAAVSEERC 309
>gi|421140323|ref|ZP_15600339.1| acyl-CoA synthetase [Pseudomonas fluorescens BBc6R8]
gi|404508530|gb|EKA22484.1| acyl-CoA synthetase [Pseudomonas fluorescens BBc6R8]
Length = 543
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE + R+ L+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVPPEQLQIRQ---AGLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P+ F P+ +L A+A+E+
Sbjct: 221 ESLGLTAQD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPSDGFDPLLTLAAVAEEQ 277
>gi|312961757|ref|ZP_07776255.1| long-chain fatty-acid-CoA ligase [Pseudomonas fluorescens WH6]
gi|311284016|gb|EFQ62599.1| long-chain fatty-acid-CoA ligase [Pseudomonas fluorescens WH6]
Length = 542
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE R+ SL+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVPPEQLHSRQ---ASLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P F P+ +L A+A+E+
Sbjct: 221 ESLGLTAQD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDPLLTLPAVAEER 277
>gi|325959830|ref|YP_004291296.1| long-chain-fatty-acid--CoA ligase [Methanobacterium sp. AL-21]
gi|325331262|gb|ADZ10324.1| Long-chain-fatty-acid--CoA ligase [Methanobacterium sp. AL-21]
Length = 552
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ K+L+ D IN+Q+TSGTTG PK LTH N++NN +IG+ +F + D K+ L VP+
Sbjct: 181 RVKKTLDNHDVINMQYTSGTTGFPKGVMLTHRNILNNGYYIGECQKFTEED-KLCLPVPL 239
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FH FG +G+L + H T V+ F P+ +L A+ KE C
Sbjct: 240 FHCFGIVLGVLAILTHRGTLVM-LEEFDPLLALAAVQKESC 279
>gi|395794343|ref|ZP_10473670.1| AMP-binding domain protein [Pseudomonas sp. Ag1]
gi|395341540|gb|EJF73354.1| AMP-binding domain protein [Pseudomonas sp. Ag1]
Length = 543
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 65 RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG 124
+L+ + G PE + R+ L+ +NIQ+TSGTTG PK A L+H+N++NN +G
Sbjct: 164 QLAALGAGVPPEQLQIRQ---AGLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVG 220
Query: 125 KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ L D ++++ VP++H FG MG L + HG+T + P+ F P+ +L A+A+E+
Sbjct: 221 ESLGLTAQD-RLVIPVPLYHCFGMVMGNLGCITHGTTMIYPSDGFDPLLTLAAVAEEQ 277
>gi|366166007|ref|ZP_09465762.1| AMP-dependent synthetase and ligase [Acetivibrio cellulolyticus
CD2]
Length = 843
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 6/107 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +RR + S+N D N+Q+TSGTTG PK LTHYN++NN IG ++ D +
Sbjct: 468 EVYRR----AISINRHDVCNMQYTSGTTGFPKGVMLTHYNVVNNGKNIGDCMDLSTAD-R 522
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VPMFH FG + + +M HG T+ P P F P SL I KEK
Sbjct: 523 MMVHVPMFHCFGMVLAMTASMTHG-VTLSPIPYFSPKQSLACINKEK 568
>gi|433650012|ref|YP_007295014.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433299789|gb|AGB25609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 537
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
S L+ + INIQ+TSGTTG PK A L+H N++NN F + + D ++ + VP +H
Sbjct: 174 SACLDNHEPINIQYTSGTTGFPKGATLSHRNILNNGYFTTELIGLGPGD-RLCIPVPFYH 232
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG MG L +HG+T V+PAP F P +L I KE C
Sbjct: 233 CFGMVMGNLGCTSHGATMVIPAPGFDPAVTLATIEKECC 271
>gi|309791565|ref|ZP_07686062.1| acyl-CoA synthase [Oscillochloris trichoides DG-6]
gi|308226386|gb|EFO80117.1| acyl-CoA synthase [Oscillochloris trichoides DG6]
Length = 564
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG+PK A L+H+N+INN F+ + + F D ++++ VP++H FG MG
Sbjct: 200 DPINIQYTSGTTGYPKGATLSHHNIINNGYFVAELMNFTHQD-RLIIPVPLYHCFGMVMG 258
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
L + HG+T + P+ F + L+A+ E+
Sbjct: 259 NLGCITHGATMIYPSEGFDALAVLQAVEAER 289
>gi|154150313|ref|YP_001403931.1| AMP-dependent synthetase/ligase [Methanoregula boonei 6A8]
gi|153998865|gb|ABS55288.1| AMP-dependent synthetase and ligase [Methanoregula boonei 6A8]
Length = 566
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GTF + ++ A + ++L D INIQ+TSGTTG PK LTH+ ++NN
Sbjct: 172 GTFTWDEFIKKADDITMDELVERGEALTFDDPINIQYTSGTTGFPKGVVLTHHGVLNNGY 231
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
IG+ + F + D ++ + VP +H FG + + + HG+T V+P P+F + L+ I KE
Sbjct: 232 IIGEGMGFTEKD-RLCIPVPFYHCFGMVLSNMASATHGTTMVLPCPTFDAEEVLKTIEKE 290
Query: 182 KC 183
+C
Sbjct: 291 RC 292
>gi|423197997|ref|ZP_17184580.1| hypothetical protein HMPREF1171_02612 [Aeromonas hydrophila SSU]
gi|404630808|gb|EKB27458.1| hypothetical protein HMPREF1171_02612 [Aeromonas hydrophila SSU]
Length = 564
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
+++ +L D INIQFTSGTTG+PK A L+H N++NN + + + F + D ++ + VP+
Sbjct: 194 RVAATLKPDDAINIQFTSGTTGNPKGATLSHSNILNNGRQVAQGMAFSEQD-RLCIPVPL 252
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG +G L ++ G+ + PA +F P +LR +++E+C
Sbjct: 253 YHCFGMVLGNLVCISVGACALFPAEAFDPAATLRMVSEERC 293
>gi|258405787|ref|YP_003198529.1| AMP-binding domain-containing protein [Desulfohalobium retbaense
DSM 5692]
gi|257798014|gb|ACV68951.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 549
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
+L+ D +N+Q+TSGTTG PK LTHYN+ NN +IG+ F D ++ L VP+FH F
Sbjct: 188 TLDPHDVVNMQYTSGTTGFPKGVMLTHYNIGNNGFWIGENQRFSHED-RVCLPVPLFHCF 246
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G+L A+ H +T VV F P+ + ++ +EKC
Sbjct: 247 GCVLGVLAAVGHAATMVV-LEGFNPVHVMSSVEQEKC 282
>gi|124265537|ref|YP_001019541.1| AMP-binding domain-containing protein [Methylibium petroleiphilum
PM1]
gi|124258312|gb|ABM93306.1| putative long chain fatty-acid CoA ligase [Methylibium
petroleiphilum PM1]
Length = 562
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142
++ ++L D INIQFTSGTTG+PK A L+H+N++NN +F+G+ + D ++ + VP+
Sbjct: 193 RLGETLQFDDPINIQFTSGTTGNPKGATLSHHNILNNGHFVGEAIRLVPGD-RLCIPVPL 251
Query: 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A+ HG+T V P+ F +L A+A+E+C
Sbjct: 252 YHCFGMVMGNLGALTHGATMVYPSEGFDAAATLAAVAEERC 292
>gi|389636283|ref|XP_003715794.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae 70-15]
gi|351648127|gb|EHA55987.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae 70-15]
Length = 579
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH+NL+NN+ +IG R+ D + P+FH FG +G+L
Sbjct: 206 NLQFTSGTTGRPKAAMLTHHNLVNNARYIGDRMRLTPAD-VLCCPPPLFHCFGLVLGMLA 264
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG V PA F +LRA+ +E C
Sbjct: 265 TITHGGKVVYPAEVFDAPATLRAVQEEGC 293
>gi|294140897|ref|YP_003556875.1| long-chain-fatty-acid--CoA ligase [Shewanella violacea DSS12]
gi|293327366|dbj|BAJ02097.1| long-chain-fatty-acid--CoA ligase, putative [Shewanella violacea
DSS12]
Length = 588
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 42 PSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRR----------EQISKSLNCR 91
P + ALP + +RMG D+ G H +R + ++ +L+
Sbjct: 172 PGKLASAALPE--LKSVIRMG----DDLSAGMFNFNHIKRPLIDNDRAILDSLAATLSPS 225
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D INIQ+TSGTTG PK A LTH+N++NN + + ++ +D K+ + VP++H FG +G
Sbjct: 226 DAINIQYTSGTTGSPKGATLTHHNILNNGLLVAEAMKL-TSDDKLCIPVPLYHCFGMVLG 284
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L + G+ V P SF+P +L A+ E+C
Sbjct: 285 NLVCIAKGAAAVFPGESFEPQATLTAVETERC 316
>gi|322778766|gb|EFZ09182.1| hypothetical protein SINV_03580 [Solenopsis invicta]
Length = 603
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
GT R +D+ A ++C DG +IQFTSG+TG KA ++H +L+NNS
Sbjct: 212 GTRRFADVEVSATTAEVDAIAAEQDKISCNDGCSIQFTSGSTGRSKATLISHKSLVNNSK 271
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+R + ++KI L +P+FH FG MG + ++ G+ V+ SF P+ +L+AIA+E
Sbjct: 272 EAARRAKI-TIENKICLNMPLFHAFGLVMGQVLILHKGNAVVIEERSFNPVKTLKAIAQE 330
Query: 182 KC 183
KC
Sbjct: 331 KC 332
>gi|386758568|ref|YP_006231784.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
gi|384931850|gb|AFI28528.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
Length = 549
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G ++ DI A E SL+ D IN+Q+TSGTTG PK LTH+N+INN+
Sbjct: 161 GLYQWDDIEILAKTVTDAELEARMNSLDKDDVINMQYTSGTTGFPKGVMLTHFNVINNAA 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + + D ++ + VP FH FG +G+L ++ G+ ++P P F P+ L+ + KE
Sbjct: 221 NIAECMALSAQD-RMCIPVPFFHCFGCVLGVLACVSVGA-AMIPVPEFDPVTVLKTVEKE 278
Query: 182 KC 183
KC
Sbjct: 279 KC 280
>gi|313672254|ref|YP_004050365.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939010|gb|ADR18202.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 548
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ KSL+ D IN+Q+TSGTTG PK L+H+N++NN+ I + F + D ++ + VP F
Sbjct: 182 VKKSLDMHDVINMQYTSGTTGFPKGVMLSHFNVLNNAYAIALGMNFTERD-RLCIPVPFF 240
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + IL + G+ T+VP SF P+D L+ + E+C
Sbjct: 241 HCFGLVLSILVCLTTGA-TMVPVESFNPVDVLKTVEMERC 279
>gi|294673231|ref|YP_003573847.1| AMP-binding enzyme [Prevotella ruminicola 23]
gi|294474186|gb|ADE83575.1| AMP-binding enzyme [Prevotella ruminicola 23]
Length = 568
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMF 143
+ K ++C D N+Q+TSGTTG PK LTHY + N+ F G+ + F + D K+ + VP+F
Sbjct: 201 MKKQVSCYDVCNMQYTSGTTGFPKGVMLTHYGISNDGYFTGENMGFTQ-DDKLCVCVPLF 259
Query: 144 HTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
H FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 260 HCFGVVLATMNCLTHGCTEVM-VEKFDPLVVLASIHKERC 298
>gi|170720998|ref|YP_001748686.1| AMP-binding domain-containing protein [Pseudomonas putida W619]
gi|169759001|gb|ACA72317.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 560
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+NIQ+TSGTTG PK A L+HYN++NN +G+ L TD ++++ VP++H FG M L
Sbjct: 204 VNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTNTD-RMVIPVPLYHCFGMVMANL 262
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ HGST + P+ +F +LRA+A+E+
Sbjct: 263 GCITHGSTMIYPSDAFDAELTLRAVAEER 291
>gi|410657740|ref|YP_006910111.1| Long-chain-fatty-acid--CoA ligase [Dehalobacter sp. DCA]
gi|409020095|gb|AFV02126.1| Long-chain-fatty-acid--CoA ligase [Dehalobacter sp. DCA]
Length = 409
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E +RR + SLN D N+Q+TSGTTG PK LTHYN++NN IG ++ D +
Sbjct: 256 EVYRR----ALSLNRHDVCNMQYTSGTTGFPKGVMLTHYNVVNNGKNIGDCMDLSTAD-R 310
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VPMFH FG + + +M HG T+ P P+F P SL I +EK
Sbjct: 311 MMIHVPMFHCFGMVLAMTASMTHG-VTMSPIPAFSPKISLDCINREK 356
>gi|125972756|ref|YP_001036666.1| AMP-dependent synthetase and ligase [Clostridium thermocellum ATCC
27405]
gi|256005675|ref|ZP_05430632.1| AMP-dependent synthetase and ligase [Clostridium thermocellum DSM
2360]
gi|281416955|ref|ZP_06247975.1| AMP-dependent synthetase and ligase [Clostridium thermocellum JW20]
gi|125712981|gb|ABN51473.1| AMP-dependent synthetase and ligase [Clostridium thermocellum ATCC
27405]
gi|255990363|gb|EEU00488.1| AMP-dependent synthetase and ligase [Clostridium thermocellum DSM
2360]
gi|281408357|gb|EFB38615.1| AMP-dependent synthetase and ligase [Clostridium thermocellum JW20]
Length = 843
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
++N D N+Q+TSGTTG PK LTHYN+INN IG ++ D ++L+QVPMFH F
Sbjct: 475 AVNRHDVCNMQYTSGTTGFPKGVMLTHYNVINNGKCIGDCMDLSTAD-RMLIQVPMFHCF 533
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G + ++ + HGS T+ P P F P +L I +EK
Sbjct: 534 GMVLSMIACVTHGS-TMCPIPYFSPKVALDCINREK 568
>gi|410097122|ref|ZP_11292106.1| hypothetical protein HMPREF1076_01284 [Parabacteroides goldsteinii
CL02T12C30]
gi|409224916|gb|EKN17840.1| hypothetical protein HMPREF1076_01284 [Parabacteroides goldsteinii
CL02T12C30]
Length = 551
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQ 139
+ E K ++C D +N+Q+TSGTTG PK LTH+N+ NN G+ ++F D K+
Sbjct: 180 KLEAAKKLVDCHDVVNMQYTSGTTGFPKGVMLTHHNIANNGLLTGEHMKF-TADDKLCCC 238
Query: 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
VP+FH FG + +N + HG T V+ F P+ L +I KE+C
Sbjct: 239 VPLFHCFGVVLASMNVLTHGCTQVM-VEKFDPLVVLASIHKERC 281
>gi|385779326|ref|YP_005688491.1| AMP-dependent synthetase and ligase [Clostridium thermocellum DSM
1313]
gi|419722286|ref|ZP_14249433.1| AMP-dependent synthetase and ligase [Clostridium thermocellum AD2]
gi|419725463|ref|ZP_14252505.1| AMP-dependent synthetase and ligase [Clostridium thermocellum YS]
gi|316941006|gb|ADU75040.1| AMP-dependent synthetase and ligase [Clostridium thermocellum DSM
1313]
gi|380771138|gb|EIC05016.1| AMP-dependent synthetase and ligase [Clostridium thermocellum YS]
gi|380781692|gb|EIC11343.1| AMP-dependent synthetase and ligase [Clostridium thermocellum AD2]
Length = 843
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
++N D N+Q+TSGTTG PK LTHYN+INN IG ++ D ++L+QVPMFH F
Sbjct: 475 AVNRHDVCNMQYTSGTTGFPKGVMLTHYNVINNGKCIGDCMDLSTAD-RMLIQVPMFHCF 533
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
G + ++ + HGS T+ P P F P +L I +EK
Sbjct: 534 GMVLSMIACVTHGS-TMCPIPYFSPKVALDCINREK 568
>gi|409075233|gb|EKM75615.1| hypothetical protein AGABI1DRAFT_123040 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 639
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
R+ +I L + IN+QFTSGTTG PKA LTH NL+NN IG+ + F + D IL
Sbjct: 250 RKLNEIRSGLEKDEVINLQFTSGTTGLPKAVSLTHSNLLNNGLSIGRSMWFSEQD--ILC 307
Query: 139 QV-PMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G L HG+ V P+P+F P + + +EKC
Sbjct: 308 NTPPLFHCFGLVLGNLATWTHGACIVYPSPTFDPAAVVDTVTEEKC 353
>gi|423719772|ref|ZP_17693954.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367260|gb|EID44540.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
Length = 544
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ A + ++ SL+ D IN+Q+TSGTTG PK LTHYN++NN+
Sbjct: 158 GAYTWNDLLALAHDVTEEQLDEQMNSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAY 217
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + ++ K D ++ + VP FH FG +G L ++ G+ T+VP F P L+ + E
Sbjct: 218 NIAQCMKLTKED-RLCIPVPFFHCFGCVLGTLACVSVGA-TMVPIQEFNPKQVLQTVQDE 275
Query: 182 KC 183
KC
Sbjct: 276 KC 277
>gi|289706149|ref|ZP_06502518.1| AMP-binding domain protein [Micrococcus luteus SK58]
gi|289557128|gb|EFD50450.1| AMP-binding domain protein [Micrococcus luteus SK58]
Length = 611
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +N+Q+TSGTTG PK LTH N++NN IG+ L + + D +++ VP FH FG +G
Sbjct: 237 DPVNLQYTSGTTGFPKGVTLTHRNVLNNGFHIGELLGYTEED-TVVIPVPFFHCFGMVIG 295
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIA 179
++ ++HGS V+PA SF+P+ +LRA+A
Sbjct: 296 VIATVSHGSLAVIPARSFEPVSALRAVA 323
>gi|322710503|gb|EFZ02077.1| hypothetical protein MAA_01659 [Metarhizium anisopliae ARSEF 23]
Length = 579
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +NIQFTSGTTG PKA+ LTH NLINN +G +L + D + P+FH FG MG
Sbjct: 201 DVLNIQFTSGTTGLPKASMLTHMNLINNGKLVGDQLRLTEKD-VVCCPPPLFHCFGLVMG 259
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+L A HGS+ V P+ F L +I E C
Sbjct: 260 VLGAFTHGSSIVFPSAQFNADLVLDSIESESC 291
>gi|426194738|gb|EKV44669.1| hypothetical protein AGABI2DRAFT_187404 [Agaricus bisporus var.
bisporus H97]
Length = 649
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILL 138
R+ +I L + IN+QFTSGTTG PKA LTH NL+NN IG+ + F + D IL
Sbjct: 260 RKLNEIRSGLEKDEVINLQFTSGTTGLPKAVSLTHSNLLNNGLSIGRSMWFSEQD--ILC 317
Query: 139 QV-PMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG +G L HG+ V P+P+F P + + +EKC
Sbjct: 318 NTPPLFHCFGLVLGNLATWTHGACIVYPSPTFDPAAVVDTVTEEKC 363
>gi|310798026|gb|EFQ32919.1| AMP-binding enzyme [Glomerella graminicola M1.001]
Length = 576
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH+N++NN+ FIG R+ D + P+FH FG +G++
Sbjct: 207 NLQFTSGTTGRPKAAMLTHHNIVNNARFIGDRMRLSPED-VLCCPPPLFHCFGLVLGLMA 265
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V PA F +L+AI +E C
Sbjct: 266 VITHGAKIVYPAEVFDTKATLKAILEEDC 294
>gi|167034657|ref|YP_001669888.1| AMP-binding domain-containing protein [Pseudomonas putida GB-1]
gi|166861145|gb|ABY99552.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 560
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDH 134
PE R+Q SL +NIQ+TSGTTG PK A L+HYN++NN +G+ L + D
Sbjct: 188 PEACSARQQ---SLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTERD- 243
Query: 135 KILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
++++ VP++H FG M L + HGST + P +F +LRA+A+E+
Sbjct: 244 RMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEER 291
>gi|376262970|ref|YP_005149690.1| acyl-CoA synthetase [Clostridium sp. BNL1100]
gi|373946964|gb|AEY67885.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
sp. BNL1100]
Length = 559
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFH 144
SKSL C D NIQ+TSGTTG+PKA THYN+INN+ GK L++ + D ++L+ +P+FH
Sbjct: 198 SKSLECYDTTNIQYTSGTTGNPKAVMSTHYNIINNAIISGKNLDYSEKD-RLLVCLPLFH 256
Query: 145 TFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G + + + +GS T+V F+ L + KEKC
Sbjct: 257 VMGCVLSAIQCLLYGS-TIVLVDRFQTTKVLEYLDKEKC 294
>gi|336235213|ref|YP_004587829.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362068|gb|AEH47748.1| Long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 544
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ A + ++ SL+ D IN+Q+TSGTTG PK LTHYN++NN+
Sbjct: 158 GAYTWNDLLALAHDVTEEQLDKQMNSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAY 217
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + ++ K D ++ + VP FH FG +G L ++ G+ T+VP F P L+ + E
Sbjct: 218 NIAQCMKLTKED-RLCIPVPFFHCFGCVLGTLACVSVGA-TMVPIQEFNPKQVLQTVQDE 275
Query: 182 KC 183
KC
Sbjct: 276 KC 277
>gi|381210101|ref|ZP_09917172.1| AMP-binding domain protein [Lentibacillus sp. Grbi]
Length = 544
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 64 FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI 123
+ +D+M+ Q SL+ ++ IN+Q+TSGTTG PK LTH+N++NN N I
Sbjct: 162 YTWNDVMEKGKTVSDEELGQRKASLDSKEVINMQYTSGTTGFPKGVMLTHHNIVNNGNQI 221
Query: 124 GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ D ++ + VP FH FG +GIL A++ G TT+V F P ++A+++EKC
Sbjct: 222 ADCMKLTHED-RLCIPVPFFHCFGCVLGILAAVSKG-TTMVLLEQFDPEKVMKAVSEEKC 279
>gi|452853284|ref|YP_007494968.1| acyl-CoA synthetase yngI [Desulfovibrio piezophilus]
gi|451896938|emb|CCH49817.1| acyl-CoA synthetase yngI [Desulfovibrio piezophilus]
Length = 546
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D +N+Q+TSGTTG PK L+HYN+ NN +IGK +F D ++ L VP+FH FG
Sbjct: 187 LDPHDVVNMQYTSGTTGFPKGVQLSHYNIGNNGYWIGKNQDFRVGD-RLALTVPLFHCFG 245
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+G+L +NHG T V+ F ++ + AI +EKC
Sbjct: 246 CVLGVLACINHGVTMVI-LEDFVALEVMNAIDQEKC 280
>gi|367470281|ref|ZP_09469993.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
gi|365814636|gb|EHN09822.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
Length = 543
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E+ + L D INIQ+TSGTTG PK A LTH N++ N +G + + D +I + VP
Sbjct: 172 ERAGEPLTADDPINIQYTSGTTGFPKGATLTHRNILGNGYLVGNGCRYGEQD-RICVPVP 230
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+H FG MG L A+ HG+ V+PA +F P +LRA A E+C
Sbjct: 231 FYHCFGMVMGNLAALAHGACVVIPAQAFDPAATLRAAAAERC 272
>gi|392534955|ref|ZP_10282092.1| AMP-binding domain protein [Pseudoalteromonas arctica A 37-1-2]
Length = 577
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ + + I +LN INIQFTSGTTG+PK A LTH N++NN+
Sbjct: 189 GMYSFNDVINLPTSAHELELKAIGANLNAEQDINIQFTSGTTGNPKGATLTHKNILNNAL 248
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
F+ + + F +D K+ + +P++H F +G L ++ G+ + P SF +L + +E
Sbjct: 249 FVAESMHF-TSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPGDSFDAKTTLDVVQQE 307
Query: 182 KC 183
C
Sbjct: 308 GC 309
>gi|255945611|ref|XP_002563573.1| Pc20g10840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588308|emb|CAP86413.1| Pc20g10840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 577
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N QFTSGTTG PKA LTH+N++NN IG R+ D I P+FH+ G +G++
Sbjct: 213 NFQFTSGTTGMPKAVMLTHFNVVNNGFLIGDRVCLSPND-TICCPWPLFHSSGFVVGLIT 271
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ HG+T V+P+P F P + RA+ E+C
Sbjct: 272 SLCHGATLVLPSPVFDPAATARALISERC 300
>gi|357040246|ref|ZP_09102035.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356910|gb|EHG04691.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 554
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL D IN+Q+TSGTTG PK LTH NL+ N IGK + F D ++ + VPMFH F
Sbjct: 187 SLEPDDVINMQYTSGTTGFPKGVMLTHTNLVGNGYSIGKCMGFGP-DDRLCIPVPMFHCF 245
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G L ++H +TT+V SF P+ L A+ KE+C
Sbjct: 246 GCVLGTLACVSH-ATTMVMIESFSPVKVLEAVEKERC 281
>gi|350545798|ref|ZP_08915250.1| Long-chain-fatty-acid--CoA ligase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526419|emb|CCD40469.1| Long-chain-fatty-acid--CoA ligase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 427
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 13 DRIGESQPFR-ERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQ 71
DR+G P R E L+ R G AY+ L L ++ + + D+M+
Sbjct: 17 DRVGIWSPNRVEWLLTQFATARMGAVLVNINPAYRLAELEYALNKVGCK--AVIVDDVMR 74
Query: 72 GAGPEYHRRR-EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD 130
+ + + LN + INIQFTSGTTG+PK A LTH N++N + +I +
Sbjct: 75 TGRDQLDSTTLDALEAKLNPNESINIQFTSGTTGNPKGATLTHRNIVNKARYIAMAMRLT 134
Query: 131 KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ D + + VP++H FG + +L ++ G TV P +F P +L A+ EKC
Sbjct: 135 EHD-SLCIPVPLYHCFGMVLAVLACVSTGCVTVFPGEAFDPGATLTAVHDEKC 186
>gi|73541161|ref|YP_295681.1| AMP-binding protein [Ralstonia eutropha JMP134]
gi|72118574|gb|AAZ60837.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 578
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
+ I+ L+ D IN+QFTSGTTG PK A LTH N++NN+ I + F + D K+ + VP
Sbjct: 209 DAITAQLDRHDPINVQFTSGTTGAPKGATLTHRNILNNARHIAAAMRFTEQD-KLCIPVP 267
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++H FG + +L ++ G+ V P +F+P+ ++ A+++E+C
Sbjct: 268 LYHCFGMVLAVLACVSTGACMVFPGEAFEPVATMSAVSEERC 309
>gi|325964235|ref|YP_004242141.1| acyl-CoA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470322|gb|ADX74007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Arthrobacter
phenanthrenivorans Sphe3]
Length = 558
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D IN+Q+TSGTTG PK A LTH N++NN IG+ L + + D ++++ VP +H FG
Sbjct: 198 LSPHDPINLQYTSGTTGFPKGATLTHRNILNNGFSIGELLRYTEHD-RVVIPVPFYHCFG 256
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
+G LNA++HG+ T++P F P +L A+
Sbjct: 257 MVIGNLNALSHGAATIIPGRGFNPAAALEAV 287
>gi|312110768|ref|YP_003989084.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311215869|gb|ADP74473.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 544
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + +D++ A + ++ SL+ D IN+Q+TSGTTG PK LTHYN++NN+
Sbjct: 158 GAYTWNDLLALAHDVPEEQLDEQMDSLDPHDVINMQYTSGTTGFPKGVMLTHYNIVNNAY 217
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + ++ K D ++ + VP FH FG +G L ++ G+ T+VP F P L+ + E
Sbjct: 218 NIAQCMKLTKED-RLCIPVPFFHCFGCVLGTLACVSVGA-TMVPIQEFNPKQVLQTVQDE 275
Query: 182 KC 183
KC
Sbjct: 276 KC 277
>gi|149370391|ref|ZP_01890080.1| acyl-CoA synthase [unidentified eubacterium SCB49]
gi|149355942|gb|EDM44499.1| acyl-CoA synthase [unidentified eubacterium SCB49]
Length = 540
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
INIQ+TSGTTG PK L+H+N++NN F+ +RL + D ++ + VP +H FG +G L
Sbjct: 187 INIQYTSGTTGFPKGVTLSHHNVLNNGYFVARRLNYTDAD-RVCIPVPFYHCFGMVIGNL 245
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+HG+ V+P+ F +L+A+ +EKC
Sbjct: 246 ACTSHGACMVIPSEGFDAALALKAVEEEKC 275
>gi|323702368|ref|ZP_08114033.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323532674|gb|EGB22548.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 554
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + DI+ A + SL+ D IN+Q+TSGTTG PK LTH+N+INN++
Sbjct: 161 GMWNWRDILAMANQVTDEELDARQASLDPDDCINMQYTSGTTGFPKGVMLTHFNIINNAH 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + F + D K+ + VP FH FG +G + + G+ T+VP F P+ L I +E
Sbjct: 221 SIADCMNFTEQD-KLCIPVPFFHCFGCVLGTMTCVVSGA-TMVPVEVFHPVRVLETIEQE 278
Query: 182 KC 183
+C
Sbjct: 279 RC 280
>gi|339488366|ref|YP_004702894.1| AMP-binding domain-containing protein [Pseudomonas putida S16]
gi|338839209|gb|AEJ14014.1| AMP-binding domain-containing protein [Pseudomonas putida S16]
Length = 560
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E + +R+Q SL +NIQ+TSGTTG PK A L+HYN++NN +G+ L D +
Sbjct: 189 EAYAKRQQ---SLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTARD-R 244
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+++ VP++H FG M L + HGST + P +F +LRA+A+E+
Sbjct: 245 MVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEER 291
>gi|333924075|ref|YP_004497655.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749636|gb|AEF94743.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 554
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G + DI+ A + SL+ D IN+Q+TSGTTG PK LTH+N+INN++
Sbjct: 161 GMWNWRDILAMANQVTDEELDARQASLDPDDCINMQYTSGTTGFPKGVMLTHFNIINNAH 220
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
I + F + D K+ + VP FH FG +G + + G+ T+VP F P+ L I +E
Sbjct: 221 SIADCMNFTEQD-KLCIPVPFFHCFGCVLGTMTCVVSGA-TMVPVEVFHPVRVLETIEQE 278
Query: 182 KC 183
+C
Sbjct: 279 RC 280
>gi|429853592|gb|ELA28657.1| long-chain-fatty-acid- ligase [Colletotrichum gloeosporioides Nara
gc5]
Length = 567
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D +N+QFTSGTTG PKAA LTH+NLIN++ F+G ++ D + P+FH FG MG
Sbjct: 212 DTLNLQFTSGTTGSPKAAVLTHFNLINDARFVGDAMQLTHED-VVCCPPPLFHCFGLVMG 270
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187
L A +GS+ + P+ SF ++ AI EK L
Sbjct: 271 FLAAFCYGSSIIFPSDSFNAQRTIDAIINEKATALL 306
>gi|447917306|ref|YP_007397874.1| AMP-binding domain protein [Pseudomonas poae RE*1-1-14]
gi|445201169|gb|AGE26378.1| AMP-binding domain protein [Pseudomonas poae RE*1-1-14]
Length = 544
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H + +Q SL+ +NIQ+TSGTTG PK A L+H+N++NN +G+ L D +++
Sbjct: 174 HEQLQQRQGSLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTAQD-RLV 232
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ VP++H FG MG L + HG+T + P F + +L A+A+E+
Sbjct: 233 IPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDALLTLTAVAEER 277
>gi|148557266|ref|YP_001264848.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148502456|gb|ABQ70710.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 539
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
L+ +M G P + + + D NIQFTSGTTG PK A L+H N++NN +G
Sbjct: 162 LASVMGGDAP--------LPRDVRPDDPTNIQFTSGTTGLPKGATLSHRNIVNNGYMVGH 213
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ D + + VP++H FG MG L + HG+T P F P +L A+A E C
Sbjct: 214 RIGLSSAD-TLCIPVPLYHCFGMVMGNLACVAHGATMCFPGEGFDPGSTLEAVAAEGC 270
>gi|171680775|ref|XP_001905332.1| hypothetical protein [Podospora anserina S mat+]
gi|27764283|emb|CAD60563.1| unnamed protein product [Podospora anserina]
gi|170940015|emb|CAP65241.1| unnamed protein product [Podospora anserina S mat+]
Length = 578
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 69 IMQGA--GPE-YHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK 125
+ QGA PE H ++ L C N+QFTSGTTG PKAA LTH+N++NNS FIG
Sbjct: 181 LTQGARVDPERLHHAESKVLPHLVC----NLQFTSGTTGLPKAAMLTHHNIVNNSRFIGD 236
Query: 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
R+ D + P+FH FG +G++ + HG + PA F +LR I E+C
Sbjct: 237 RMRLTHND-VLCCPPPLFHCFGLVLGLMAVITHGGKIIYPAEVFDAPATLRTIIGEQC 293
>gi|440465084|gb|ELQ34425.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae Y34]
gi|440484524|gb|ELQ64585.1| short-chain-fatty-acid-CoA ligase [Magnaporthe oryzae P131]
Length = 648
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH+NL+NN+ +IG R+ D + P+FH FG +G+L
Sbjct: 206 NLQFTSGTTGRPKAAMLTHHNLVNNARYIGDRMRLTPAD-VLCCPPPLFHCFGLVLGMLA 264
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG V PA F +LRA+ +E C
Sbjct: 265 TITHGGKVVYPAEVFDAPATLRAVQEEGC 293
>gi|377822092|ref|YP_004978463.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357936927|gb|AET90486.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 576
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 42 PSAYKADALPTKLTRLALRMG------TFRLSDIMQ-GAGPEYHRRREQISKSLNCRDGI 94
P+A A LP R +RMG ++M G E + + + D I
Sbjct: 162 PNALHAAKLPE--LRAVIRMGEGKTPGMLNFDEVMHTGRAQEDKTKLDALEAKFAPDDAI 219
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
NIQFTSGTTG+PK A LTH N++NN+ +I + + D + + VP++H FG + +L
Sbjct: 220 NIQFTSGTTGNPKGATLTHRNIVNNARYIAMAMRLTEQD-SLCIPVPLYHCFGMVLAVLA 278
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
++ G V P +F P +L A+ +E+C
Sbjct: 279 CVSTGCAMVFPGEAFDPGATLAAVHEERC 307
>gi|440741171|ref|ZP_20920624.1| AMP-binding domain protein [Pseudomonas fluorescens BRIP34879]
gi|440373654|gb|ELQ10411.1| AMP-binding domain protein [Pseudomonas fluorescens BRIP34879]
Length = 544
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 78 HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
H + +Q SL+ +NIQ+TSGTTG PK A L+H+N++NN +G+ L D +++
Sbjct: 174 HEQLQQRQGSLHFDQPVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTAQD-RLV 232
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ VP++H FG MG L + HG+T + P F + +L A+A+E+
Sbjct: 233 IPVPLYHCFGMVMGNLGCITHGTTMIYPNDGFDALLTLTAVAEER 277
>gi|408481202|ref|ZP_11187421.1| AMP-binding domain protein [Pseudomonas sp. R81]
Length = 544
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
SL+ +NIQ+TSGTTG PK A L+H+N++NN +G+ L D ++++ VP++H F
Sbjct: 183 SLHFDQAVNIQYTSGTTGFPKGATLSHHNILNNGYMVGESLGLTAQD-RLVIPVPLYHCF 241
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
G MG L + HG+T + P F P+ +L A+A+E
Sbjct: 242 GMVMGNLGCITHGTTMIYPNDGFDPLLTLTAVAEE 276
>gi|374299364|ref|YP_005051003.1| long-chain-fatty-acid--CoA ligase [Desulfovibrio africanus str.
Walvis Bay]
gi|332552300|gb|EGJ49344.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio africanus str.
Walvis Bay]
Length = 549
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 62 GTFRLSDIMQGAG----PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI 117
G + + +I+ A EY R++ SL+ D +N+Q+TSGTTG PK L+H++++
Sbjct: 162 GMYSIPEILSLASMVDDEEYKARQD----SLSPHDVVNMQYTSGTTGFPKGVMLSHFSIL 217
Query: 118 NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRA 177
NN +IG+ +F D ++ L VP+FH FG +G++ +NHG+ V+ +F P+ + +
Sbjct: 218 NNGFWIGENQKFTHKD-RVCLPVPLFHCFGCVLGVMACVNHGAAMVL-LETFDPLQVMAS 275
Query: 178 IAKEKC 183
+ EKC
Sbjct: 276 VDAEKC 281
>gi|138895109|ref|YP_001125562.1| AMP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196248309|ref|ZP_03147010.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|134266622|gb|ABO66817.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|196212034|gb|EDY06792.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 544
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G F +DI+ A ++ +SL+ D IN+Q+TSGTTG PK L+HYN++NN++
Sbjct: 158 GMFTWNDILAMAHEVTEEELDERLESLDPHDAINMQYTSGTTGFPKGVMLSHYNIVNNAH 217
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKE 181
+ + ++ + D ++ + VP FH FG M L + G+ T+VP F P L +A E
Sbjct: 218 QVAQCMKLGEGD-RLCIPVPFFHCFGCVMSTLACVTVGA-TMVPVVEFHPKRVLETVAAE 275
Query: 182 KC 183
+C
Sbjct: 276 RC 277
>gi|323487936|ref|ZP_08093192.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
gi|323398360|gb|EGA91150.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
Length = 547
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
S+N D INIQ+TSGTTG PK LTH N++NN +G + + D ++ + VP FH F
Sbjct: 185 SMNPDDVINIQYTSGTTGFPKGVMLTHLNVVNNGKLVGDTMALTEKD-RLCIPVPFFHCF 243
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G + A+ H STT+V A F+P L+ + EKC
Sbjct: 244 GCVLGTMAAVTH-STTMVIAEQFEPKRVLQMVQDEKC 279
>gi|237710958|ref|ZP_04541439.1| acyl-CoA synthetase [Bacteroides sp. 9_1_42FAA]
gi|229454802|gb|EEO60523.1| acyl-CoA synthetase [Bacteroides sp. 9_1_42FAA]
Length = 550
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
++C D +N+Q+TSGTTG PK LTHYN+ NN G+ ++F +D + + VP+FH FG
Sbjct: 187 VDCHDTVNMQYTSGTTGFPKGVMLTHYNISNNGFLTGEHMKF-TSDDTLCVCVPLFHCFG 245
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +N + HG T V+ F P+ L ++ KE+C
Sbjct: 246 VVLATMNCLTHGCTQVM-VERFDPLLVLASVHKERC 280
>gi|241060952|ref|XP_002408048.1| acyl-CoA synthetase, putative [Ixodes scapularis]
gi|215492344|gb|EEC01985.1| acyl-CoA synthetase, putative [Ixodes scapularis]
Length = 597
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 39 NPRPSAYKADALP----TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94
N +P K+ LP L A + GT +++Q + + D +
Sbjct: 192 NSKPGELKSARLPRLKHVILIAEAAKPGTVTYDELIQSVQNQEEGSVNVALPKVQYDDPV 251
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
++QFTSGTTG PK+ L+H+N++NN+ G L F + + L +PM H G G L
Sbjct: 252 SVQFTSGTTGKPKSVLLSHFNIVNNAETAGHVLGFQDHEDIVCLTLPMSHPLGCIAGTLA 311
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
A+ G T V+PAP F P + +AI KC
Sbjct: 312 AVTFGRTLVLPAPVFDPTTAFKAIKDNKC 340
>gi|225683361|gb|EEH21645.1| short-chain-fatty-acid-CoA ligase [Paracoccidioides brasiliensis
Pb03]
Length = 701
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHT 145
+ L+ D INIQFTSGTT PKAA LTH +++NN IG R+ F D + P+FH
Sbjct: 199 QGLSPNDIINIQFTSGTTSMPKAACLTHRSILNNGVQIGDRMLFTPND-IVCCPPPLFHC 257
Query: 146 FGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
FG +G + HGS V PA SF + +L+A+ +EKC
Sbjct: 258 FGCILGYMATATHGSAIVFPAESFNAIATLKAVQEEKC 295
>gi|71021439|ref|XP_760950.1| hypothetical protein UM04803.1 [Ustilago maydis 521]
gi|46101025|gb|EAK86258.1| hypothetical protein UM04803.1 [Ustilago maydis 521]
Length = 720
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMG 151
D IN+Q TSGTTG PKA LT NL+NN IG L F + D K+ P+FH FG +G
Sbjct: 288 DVINLQLTSGTTGKPKAVALTSRNLLNNGIAIGDNLRFTEAD-KLCNIPPLFHCFGLVLG 346
Query: 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
L A HG++ V A F P+ SLRA+++E+C
Sbjct: 347 NLAAWTHGASIVYAAEGFDPLRSLRAVSEERC 378
>gi|46581468|ref|YP_012276.1| AMP-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601362|ref|YP_965762.1| AMP-binding protein [Desulfovibrio vulgaris DP4]
gi|387154676|ref|YP_005703612.1| AMP-dependent synthetase and ligase [Desulfovibrio vulgaris RCH1]
gi|46450890|gb|AAS97536.1| AMP-binding enzyme family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561591|gb|ABM27335.1| AMP-dependent synthetase and ligase [Desulfovibrio vulgaris DP4]
gi|311235120|gb|ADP87974.1| AMP-dependent synthetase and ligase [Desulfovibrio vulgaris RCH1]
Length = 550
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 6/108 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E+ +R+++ L+ D +N+Q+TSGTTG PK LTH + NN +IG+ F + D +
Sbjct: 181 EFRQRQDE----LDPYDVVNMQYTSGTTGFPKGVMLTHVGIGNNGYWIGRNQGFTEKD-R 235
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ L VP+FH FG +G++ A+NHG+ V+ +F PM + ++ +EKC
Sbjct: 236 VCLPVPLFHCFGCVLGVMAAINHGAALVI-LENFNPMHVMASVDQEKC 282
>gi|389817941|ref|ZP_10208454.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
gi|388464231|gb|EIM06564.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
Length = 547
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTF 146
S+ D INIQ+TSGTTG PK LTH N++NN N +G + + D ++ + VP FH F
Sbjct: 185 SMQPDDVINIQYTSGTTGFPKGVMLTHLNVVNNGNLVGDTMSLTEKD-RLCIPVPFFHCF 243
Query: 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
G +G + A+ H STT++ A F+P L+ + EKC
Sbjct: 244 GCVLGTMAAVTH-STTMIIAEQFEPKRVLQMVQDEKC 279
>gi|104782428|ref|YP_608926.1| AMP-binding domain-containing protein [Pseudomonas entomophila L48]
gi|95111415|emb|CAK16135.1| putative long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila
L48]
Length = 557
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+NIQ+TSGTTG PK A L+HYN++NN +G+ L + D ++++ VP++H FG MG L
Sbjct: 204 VNIQYTSGTTGAPKGATLSHYNILNNGYMVGESLGLTERD-RMVIPVPLYHCFGMVMGNL 262
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ HGS + P +F +LRA+A+E+
Sbjct: 263 GCITHGSAMIYPNDAFDAELTLRAVAEER 291
>gi|291544332|emb|CBL17441.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Ruminococcus champanellensis 18P13]
Length = 840
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHK 135
E RR I K+ C N+Q+TSGTTG PK LTHYN++NN IG ++ D +
Sbjct: 465 EVEARRRTIDKNDVC----NMQYTSGTTGFPKGVMLTHYNVVNNGKAIGDCMDLSTAD-R 519
Query: 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186
+++QVPMFH FG + + ++ HG TT+ P +F P L I KEK +
Sbjct: 520 MMIQVPMFHCFGMVLAMTASVTHG-TTMSPITAFSPRKGLACINKEKITAF 569
>gi|320164230|gb|EFW41129.1| AMP-dependent synthetase and ligase [Capsaspora owczarzaki ATCC
30864]
Length = 729
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGIL 153
+NIQFTSGTTG PKA+ L+H+N++NN +G L D ++ + VP++H FG M L
Sbjct: 299 VNIQFTSGTTGKPKASTLSHFNILNNGAMVGHYLRQTPAD-RVCIPVPLYHCFGMVMSNL 357
Query: 154 NAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ H S V P+P+F P +LRA+ EKC
Sbjct: 358 ACLTHRSVMVYPSPNFDPEAALRAVLDEKC 387
>gi|302418168|ref|XP_003006915.1| 4-coumarate-CoA ligase [Verticillium albo-atrum VaMs.102]
gi|261354517|gb|EEY16945.1| 4-coumarate-CoA ligase [Verticillium albo-atrum VaMs.102]
Length = 578
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILN 154
N+QFTSGTTG PKAA LTH++L+NN+ FIG R+ +D + P+FH FG +G+L+
Sbjct: 206 NLQFTSGTTGLPKAAMLTHHSLVNNARFIGDRMRLTPSD-ILCCPPPLFHCFGLVLGLLS 264
Query: 155 AMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ HG+ V PA F +L AI E+C
Sbjct: 265 VVTHGAKIVYPAEVFDVPATLSAILDERC 293
>gi|347837340|emb|CCD51912.1| similar to acyl-CoA synthetase/AMP-acid ligase II [Botryotinia
fuckeliana]
Length = 637
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 79 RRREQI-SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKIL 137
+ +E I ++ L+ D INIQFTSGTT PKAA LTH++++NN FIG R+ +D +
Sbjct: 203 KEKEVIPNQELHKDDVINIQFTSGTTSTPKAACLTHHSILNNGYFIGSRMALTPSD-VVC 261
Query: 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
P+FH FG+ +G + HGST + P+P+F P +L ++ + K
Sbjct: 262 CPPPLFHCFGSILGYMATATHGSTILFPSPAFNPSATLLSVQENKA 307
>gi|340975890|gb|EGS23005.1| long-chain fatty-acid-CoA ligase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 681
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147
L+ D INIQFTSGTT PKAA L+H N++NN N I +R+ D +D I+ P+FH FG
Sbjct: 288 LSPSDTINIQFTSGTTSQPKAAMLSHTNILNNGNLIAQRMGLDPSD-LIVCPPPLFHCFG 346
Query: 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183
+ +G + G+ + P+P+F P+ +LR A +
Sbjct: 347 SVLGYMATATTGAAILFPSPAFDPVATLRMAAAHRA 382
>gi|433459238|ref|ZP_20417071.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432191472|gb|ELK48421.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 545
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN 121
G L ++ A R ++ + L D INIQ+TSGTTG PK A LTH N++NN
Sbjct: 159 GALTLGQVVASAESVPPARLQERMEQLRADDPINIQYTSGTTGFPKGATLTHRNILNNGF 218
Query: 122 FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAI 178
IG+ + + D +++L VP +H FG +G LN +HG+ ++P SF D+L+A+
Sbjct: 219 SIGELMGYTPED-RVVLPVPFYHCFGMVIGNLNIYSHGAAAILPGRSFSAADTLQAV 274
>gi|381187508|ref|ZP_09895072.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
gi|379650636|gb|EIA09207.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
Length = 559
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 69 IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE 128
I G +YH ++ S +L+ D INIQFTSGTTG PK A L+H+N++NN F K
Sbjct: 180 IDMGIRIDYHELEKRQS-TLSFDDPINIQFTSGTTGSPKGATLSHHNILNNGYFATKTQR 238
Query: 129 FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
+ D KI++ VP++H FG +G L ++ G+T + P+ +F +L+AI++EK
Sbjct: 239 ITEKD-KIVIPVPLYHCFGMVLGNLGCISQGATMIYPSETFDAETTLKAISEEK 291
>gi|268608566|ref|ZP_06142293.1| AMP-dependent synthetase and ligase [Ruminococcus flavefaciens
FD-1]
Length = 842
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141
E + K+++ D N+Q+TSGTTG PK LTHYN++NN IG ++ D ++++QVP
Sbjct: 468 EAVRKTIDIHDVCNMQYTSGTTGFPKGVMLTHYNVVNNGKAIGDCMDLSTAD-RMMIQVP 526
Query: 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182
MFH FG + + ++ HG T+ P F P L I KEK
Sbjct: 527 MFHCFGMVLAMTASVTHG-VTMSPITRFSPRKGLACINKEK 566
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,946,666,419
Number of Sequences: 23463169
Number of extensions: 117899762
Number of successful extensions: 354405
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4659
Number of HSP's successfully gapped in prelim test: 12601
Number of HSP's that attempted gapping in prelim test: 340473
Number of HSP's gapped (non-prelim): 19856
length of query: 190
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 56
effective length of database: 9,215,130,721
effective search space: 516047320376
effective search space used: 516047320376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)