Query psy13808
Match_columns 190
No_of_seqs 142 out of 1847
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 21:01:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13808.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13808hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177|consensus 100.0 8.1E-32 1.8E-36 213.1 14.7 184 5-189 95-331 (596)
2 COG0365 Acs Acyl-coenzyme A sy 99.9 9.3E-27 2E-31 191.8 14.9 165 18-189 96-271 (528)
3 KOG1176|consensus 99.9 9.6E-26 2.1E-30 186.5 11.9 168 18-189 103-280 (537)
4 PLN02614 long-chain acyl-CoA s 99.9 2.4E-24 5.3E-29 184.7 15.6 165 16-189 133-322 (666)
5 PLN02736 long-chain acyl-CoA s 99.9 5.7E-24 1.2E-28 182.0 14.0 165 16-189 132-315 (651)
6 COG1022 FAA1 Long-chain acyl-C 99.9 3.6E-24 7.7E-29 178.9 11.7 175 11-189 94-286 (613)
7 COG0318 CaiC Acyl-CoA syntheta 99.9 1.7E-23 3.6E-28 175.5 15.2 167 17-189 93-271 (534)
8 KOG1179|consensus 99.9 3.3E-24 7E-29 173.1 10.3 168 18-187 160-336 (649)
9 PLN03051 acyl-activating enzym 99.9 1.1E-23 2.4E-28 175.2 13.9 176 12-189 19-215 (499)
10 PTZ00342 acyl-CoA synthetase; 99.9 1.5E-23 3.2E-28 181.0 14.7 170 16-189 159-400 (746)
11 PLN02861 long-chain-fatty-acid 99.9 2.8E-23 6.1E-28 178.0 15.0 165 15-189 130-319 (660)
12 PLN02654 acetate-CoA ligase 99.9 4.7E-23 1E-27 176.8 16.3 167 16-189 174-376 (666)
13 PLN03052 acetate--CoA ligase; 99.9 4.7E-23 1E-27 178.1 15.8 171 16-189 262-452 (728)
14 TIGR02316 propion_prpE propion 99.9 6.8E-23 1.5E-27 174.8 16.0 168 16-189 137-333 (628)
15 PRK04319 acetyl-CoA synthetase 99.9 8E-23 1.7E-27 172.5 16.0 168 15-189 126-302 (570)
16 PRK06334 long chain fatty acid 99.9 1.2E-22 2.6E-27 170.4 14.4 175 14-189 94-280 (539)
17 KOG1256|consensus 99.9 8.3E-23 1.8E-27 169.8 11.4 171 11-189 157-355 (691)
18 PRK07529 AMP-binding domain pr 99.9 5.5E-22 1.2E-26 169.3 16.3 173 12-189 107-315 (632)
19 TIGR01217 ac_ac_CoA_syn acetoa 99.9 5E-22 1.1E-26 170.1 15.9 163 18-188 170-362 (652)
20 PRK13295 cyclohexanecarboxylat 99.9 1E-21 2.2E-26 164.9 16.3 173 14-188 107-292 (547)
21 PLN02860 o-succinylbenzoate-Co 99.9 4.7E-22 1E-26 167.6 14.2 172 15-189 85-267 (563)
22 PRK08180 feruloyl-CoA synthase 99.9 7.9E-22 1.7E-26 167.9 14.8 170 16-189 123-311 (614)
23 PRK07867 acyl-CoA synthetase; 99.9 7E-22 1.5E-26 165.5 13.7 164 15-188 82-247 (529)
24 PRK00174 acetyl-CoA synthetase 99.9 2.2E-21 4.8E-26 165.7 16.8 167 16-189 152-346 (637)
25 TIGR02188 Ac_CoA_lig_AcsA acet 99.9 2.2E-21 4.8E-26 165.4 16.4 167 16-189 142-337 (625)
26 PRK07788 acyl-CoA synthetase; 99.9 1.2E-21 2.5E-26 164.6 14.3 164 15-189 127-302 (549)
27 PRK08279 long-chain-acyl-CoA s 99.9 1.1E-21 2.4E-26 166.4 14.3 173 14-189 114-295 (600)
28 TIGR03208 cyc_hxne_CoA_lg cycl 99.9 3.6E-21 7.8E-26 161.3 16.8 173 14-188 105-290 (538)
29 PRK13388 acyl-CoA synthetase; 99.9 1.6E-21 3.4E-26 163.7 14.4 164 14-188 79-245 (540)
30 PLN02430 long-chain-fatty-acid 99.9 1.7E-21 3.8E-26 167.0 14.8 165 16-189 130-319 (660)
31 PRK08043 bifunctional acyl-[ac 99.9 7.5E-22 1.6E-26 170.7 12.3 170 14-189 282-462 (718)
32 PRK12583 acyl-CoA synthetase; 99.9 4.3E-21 9.4E-26 161.2 16.4 173 16-189 99-298 (558)
33 PLN02574 4-coumarate--CoA liga 99.9 2.1E-21 4.5E-26 163.6 13.9 167 15-189 120-299 (560)
34 PTZ00237 acetyl-CoA synthetase 99.9 3.4E-21 7.4E-26 164.8 15.1 171 16-189 146-356 (647)
35 PRK08314 long-chain-fatty-acid 99.9 3.5E-21 7.6E-26 161.5 14.8 166 15-189 89-286 (546)
36 PTZ00297 pantothenate kinase; 99.9 2.5E-21 5.5E-26 174.7 14.6 173 7-189 477-696 (1452)
37 PRK06087 short chain acyl-CoA 99.9 6.7E-21 1.4E-25 159.9 16.2 165 16-188 103-282 (547)
38 PLN02387 long-chain-fatty-acid 99.9 2E-21 4.3E-26 167.5 13.0 168 15-189 159-354 (696)
39 PRK08315 AMP-binding domain pr 99.9 1E-20 2.2E-25 159.1 16.5 174 15-189 96-296 (559)
40 TIGR03098 ligase_PEP_1 acyl-Co 99.9 1.3E-20 2.7E-25 156.9 15.7 165 15-189 78-256 (515)
41 PRK10524 prpE propionyl-CoA sy 99.9 1E-20 2.2E-25 161.4 15.5 168 16-189 138-334 (629)
42 PRK07638 acyl-CoA synthetase; 99.9 1E-20 2.2E-25 156.7 15.1 161 15-189 78-238 (487)
43 PLN02246 4-coumarate--CoA liga 99.9 1E-20 2.3E-25 158.5 14.8 165 16-189 104-279 (537)
44 PRK03584 acetoacetyl-CoA synth 99.9 1.8E-20 3.8E-25 160.7 16.2 166 16-189 168-362 (655)
45 PRK08008 caiC putative crotono 99.9 1.5E-20 3.2E-25 156.8 15.3 169 14-189 89-269 (517)
46 PLN03102 acyl-activating enzym 99.9 1.6E-20 3.4E-25 158.9 15.5 170 16-189 93-281 (579)
47 PRK08633 2-acyl-glycerophospho 99.9 6.9E-21 1.5E-25 171.6 14.1 174 15-189 693-879 (1146)
48 PRK12467 peptide synthase; Pro 99.9 6.1E-21 1.3E-25 186.6 14.5 163 12-189 3170-3334(3956)
49 PRK05620 long-chain-fatty-acid 99.8 2.1E-20 4.5E-25 158.0 14.7 169 13-189 90-279 (576)
50 PRK08308 acyl-CoA synthetase; 99.8 2.7E-20 5.8E-25 151.5 14.5 100 88-189 98-197 (414)
51 PRK13382 acyl-CoA synthetase; 99.8 2.1E-20 4.6E-25 156.8 14.2 164 15-189 121-291 (537)
52 PRK07656 long-chain-fatty-acid 99.8 3.4E-20 7.4E-25 154.1 15.1 167 15-189 83-262 (513)
53 PRK06839 acyl-CoA synthetase; 99.8 3.1E-20 6.7E-25 153.9 14.1 161 15-189 81-245 (496)
54 PRK12582 acyl-CoA synthetase; 99.8 3.3E-20 7.1E-25 158.2 14.4 170 16-189 134-323 (624)
55 PRK06814 acylglycerophosphoeth 99.8 1.1E-20 2.5E-25 170.3 12.1 171 15-189 710-890 (1140)
56 PRK12467 peptide synthase; Pro 99.8 2.3E-20 4.9E-25 182.7 14.8 166 12-189 587-754 (3956)
57 PRK06155 crotonobetaine/carnit 99.8 2.8E-20 6.1E-25 156.2 13.5 167 14-188 98-274 (542)
58 TIGR02275 DHB_AMP_lig 2,3-dihy 99.8 7.3E-20 1.6E-24 153.1 15.8 166 16-189 102-280 (527)
59 PRK10252 entF enterobactin syn 99.8 3.5E-20 7.7E-25 168.9 14.5 161 13-189 534-696 (1296)
60 PRK03640 O-succinylbenzoic aci 99.8 4E-20 8.6E-25 152.8 13.4 159 13-189 78-236 (483)
61 PRK06164 acyl-CoA synthetase; 99.8 8.2E-20 1.8E-24 153.1 15.4 170 15-189 88-276 (540)
62 PRK12316 peptide synthase; Pro 99.8 3.4E-20 7.3E-25 183.9 14.9 166 12-189 586-753 (5163)
63 PRK10946 entE enterobactin syn 99.8 6.5E-20 1.4E-24 153.7 14.6 164 18-189 104-279 (536)
64 PRK07786 long-chain-fatty-acid 99.8 6.3E-20 1.4E-24 154.0 14.4 168 15-189 95-272 (542)
65 TIGR02262 benz_CoA_lig benzoat 99.8 9E-20 1.9E-24 151.8 15.1 169 14-189 82-259 (508)
66 PRK12316 peptide synthase; Pro 99.8 5E-20 1.1E-24 182.7 15.5 164 13-189 2079-2243(5163)
67 PLN02330 4-coumarate--CoA liga 99.8 1.1E-19 2.5E-24 152.5 15.1 170 14-189 107-282 (546)
68 PRK07008 long-chain-fatty-acid 99.8 1.1E-19 2.4E-24 152.4 14.8 168 14-189 91-274 (539)
69 PTZ00216 acyl-CoA synthetase; 99.8 7E-20 1.5E-24 158.1 13.6 165 16-189 175-368 (700)
70 PRK06187 long-chain-fatty-acid 99.8 2.2E-19 4.8E-24 149.3 15.6 167 14-189 83-262 (521)
71 PRK05677 long-chain-fatty-acid 99.8 1.8E-19 3.8E-24 152.0 15.2 170 15-189 103-307 (562)
72 PRK05852 acyl-CoA synthetase; 99.8 1.7E-19 3.6E-24 151.2 14.9 172 14-189 95-274 (534)
73 PRK06145 acyl-CoA synthetase; 99.8 2.1E-19 4.6E-24 149.1 15.2 168 12-189 77-245 (497)
74 PRK08316 acyl-CoA synthetase; 99.8 2.2E-19 4.8E-24 149.6 15.0 169 12-189 86-267 (523)
75 PRK07787 acyl-CoA synthetase; 99.8 1.5E-19 3.3E-24 149.3 13.8 154 12-189 70-223 (471)
76 PRK05605 long-chain-fatty-acid 99.8 2.4E-19 5.2E-24 151.4 15.2 173 14-189 109-317 (573)
77 PRK06060 acyl-CoA synthetase; 99.8 7.7E-20 1.7E-24 157.9 12.4 161 14-189 82-243 (705)
78 PRK05691 peptide synthase; Val 99.8 9.6E-20 2.1E-24 179.4 13.5 165 11-189 3794-3967(4334)
79 PRK06178 acyl-CoA synthetase; 99.8 4.1E-19 8.9E-24 149.8 15.4 172 13-189 109-306 (567)
80 PRK07514 malonyl-CoA synthase; 99.8 3.5E-19 7.6E-24 147.9 14.8 165 14-188 80-249 (504)
81 PRK05691 peptide synthase; Val 99.8 2.5E-19 5.4E-24 176.5 14.5 162 14-189 1208-1371(4334)
82 PRK06018 putative acyl-CoA syn 99.8 6.9E-19 1.5E-23 147.7 14.7 167 15-189 92-275 (542)
83 KOG1175|consensus 99.8 2.2E-19 4.8E-24 149.4 11.3 176 6-188 115-337 (626)
84 TIGR03443 alpha_am_amid L-amin 99.8 3.4E-19 7.4E-24 163.5 13.6 170 15-189 323-513 (1389)
85 PRK09274 peptide synthase; Pro 99.8 4.8E-19 1E-23 148.9 12.8 161 15-189 94-269 (552)
86 PRK07470 acyl-CoA synthetase; 99.8 9.7E-19 2.1E-23 146.2 13.8 168 14-189 84-261 (528)
87 TIGR01733 AA-adenyl-dom amino 99.8 1.9E-18 4.2E-23 139.7 14.7 164 15-189 53-218 (408)
88 PLN02479 acetate-CoA ligase 99.8 1.5E-18 3.2E-23 146.5 14.5 166 16-189 99-290 (567)
89 PRK12476 putative fatty-acid-- 99.8 2.8E-19 6.1E-24 152.2 10.2 157 18-189 124-295 (612)
90 PRK07798 acyl-CoA synthetase; 99.8 2.2E-18 4.7E-23 143.8 15.1 167 14-189 80-275 (533)
91 PRK07445 O-succinylbenzoic aci 99.8 5.9E-19 1.3E-23 145.3 11.4 143 13-188 71-213 (452)
92 PRK09088 acyl-CoA synthetase; 99.8 1.9E-18 4.1E-23 143.2 14.4 156 15-188 75-232 (488)
93 PRK05857 acyl-CoA synthetase; 99.8 1E-18 2.3E-23 146.7 12.5 165 15-189 94-267 (540)
94 PRK06188 acyl-CoA synthetase; 99.8 2.4E-18 5.2E-23 143.8 14.2 167 15-189 90-262 (524)
95 TIGR03089 conserved hypothetic 99.8 1.2E-18 2.6E-23 131.1 11.1 155 7-184 48-227 (227)
96 PRK08162 acyl-CoA synthetase; 99.8 4.3E-18 9.2E-23 142.9 15.5 167 15-189 96-277 (545)
97 TIGR03205 pimA dicarboxylate-- 99.8 3.6E-18 7.8E-23 143.3 14.1 167 15-189 99-293 (541)
98 PRK07769 long-chain-fatty-acid 99.8 1.3E-18 2.9E-23 148.5 11.7 146 23-183 118-273 (631)
99 KOG1180|consensus 99.8 6.3E-19 1.4E-23 142.5 8.6 146 15-167 143-312 (678)
100 TIGR01734 D-ala-DACP-lig D-ala 99.8 5.4E-18 1.2E-22 140.8 14.5 161 14-189 77-239 (502)
101 TIGR01923 menE O-succinylbenzo 99.8 4.1E-18 8.8E-23 139.1 13.2 152 16-189 53-204 (436)
102 PRK12492 long-chain-fatty-acid 99.8 5.8E-18 1.2E-22 142.8 14.5 169 16-189 104-314 (562)
103 PRK08751 putative long-chain f 99.8 8.8E-18 1.9E-22 141.5 14.3 169 14-188 103-309 (560)
104 PRK06710 long-chain-fatty-acid 99.8 1.8E-17 4E-22 139.7 15.9 171 12-189 99-304 (563)
105 PRK07059 Long-chain-fatty-acid 99.8 1.4E-17 2.9E-22 140.3 15.1 170 15-189 101-308 (557)
106 PRK04813 D-alanine--poly(phosp 99.8 1.4E-17 3E-22 138.2 14.8 159 16-189 81-241 (503)
107 PF00501 AMP-binding: AMP-bind 99.8 1.3E-18 2.8E-23 141.2 7.9 166 14-189 73-254 (417)
108 PRK12406 long-chain-fatty-acid 99.8 1.2E-17 2.6E-22 139.1 13.8 164 14-189 63-250 (509)
109 PRK09192 acyl-CoA synthetase; 99.8 6E-18 1.3E-22 143.2 11.8 154 23-188 117-276 (579)
110 PRK05850 acyl-CoA synthetase; 99.8 5.5E-18 1.2E-22 143.2 11.4 158 16-187 88-264 (578)
111 PRK05851 long-chain-fatty-acid 99.8 7.3E-18 1.6E-22 141.1 11.0 99 88-188 149-251 (525)
112 PRK13383 acyl-CoA synthetase; 99.7 1.3E-17 2.9E-22 139.1 11.4 155 16-189 114-271 (516)
113 PRK13390 acyl-CoA synthetase; 99.7 2.5E-17 5.5E-22 136.9 12.7 163 14-189 76-249 (501)
114 PRK07768 long-chain-fatty-acid 99.7 6.9E-17 1.5E-21 135.6 14.9 102 87-188 148-252 (545)
115 PRK13391 acyl-CoA synthetase; 99.7 4.7E-17 1E-21 135.7 13.8 162 16-189 78-254 (511)
116 PRK08276 long-chain-fatty-acid 99.7 5.3E-17 1.2E-21 135.0 13.4 164 14-189 63-241 (502)
117 PRK08974 long-chain-fatty-acid 99.7 1.2E-16 2.6E-21 134.7 15.6 169 15-188 102-305 (560)
118 PRK09029 O-succinylbenzoic aci 99.7 4.6E-17 1E-21 134.0 12.6 142 16-187 82-223 (458)
119 PRK07868 acyl-CoA synthetase; 99.7 5.1E-17 1.1E-21 144.9 12.1 163 23-189 530-701 (994)
120 TIGR02372 4_coum_CoA_lig 4-cou 99.7 3.2E-16 6.8E-21 126.6 11.7 97 89-188 93-190 (386)
121 COG1021 EntE Peptide arylation 99.7 4.7E-17 1E-21 127.4 5.0 164 18-188 109-285 (542)
122 PRK07824 O-succinylbenzoic aci 99.6 7.5E-15 1.6E-19 117.3 12.9 92 88-183 32-125 (358)
123 COG1020 EntF Non-ribosomal pep 99.6 3.6E-14 7.7E-19 121.5 13.3 161 11-189 301-464 (642)
124 TIGR02155 PA_CoA_ligase phenyl 99.4 6.9E-13 1.5E-17 108.5 10.7 100 88-189 72-174 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.3 1.5E-11 3.2E-16 101.4 10.5 98 88-189 83-183 (445)
126 COG1541 PaaK Coenzyme F390 syn 98.3 6.3E-06 1.4E-10 67.0 9.9 101 87-189 86-189 (438)
127 KOG1178|consensus 97.9 1.7E-05 3.7E-10 70.6 5.9 100 87-189 192-295 (1032)
128 TIGR02304 aden_form_hyp probab 96.0 0.059 1.3E-06 44.6 9.0 90 93-189 101-194 (430)
129 KOG3628|consensus 95.8 0.058 1.3E-06 48.8 8.4 102 86-188 938-1042(1363)
130 PF00501 AMP-binding: AMP-bind 93.8 1 2.2E-05 36.5 10.4 91 87-188 6-99 (417)
131 KOG3628|consensus 93.6 0.13 2.8E-06 46.7 4.9 94 93-188 252-367 (1363)
132 PLN03052 acetate--CoA ligase; 93.2 2.9 6.2E-05 37.2 12.8 98 89-190 188-288 (728)
133 PRK00174 acetyl-CoA synthetase 93.2 2.5 5.3E-05 36.7 12.2 97 88-190 79-178 (637)
134 TIGR02188 Ac_CoA_lig_AcsA acet 93.1 2.8 6.2E-05 36.2 12.4 97 88-190 69-168 (625)
135 PTZ00237 acetyl-CoA synthetase 92.7 3.7 7.9E-05 35.9 12.6 96 89-190 74-172 (647)
136 PRK09274 peptide synthase; Pro 92.5 2.7 5.9E-05 35.6 11.4 97 89-188 19-119 (552)
137 PRK03584 acetoacetyl-CoA synth 92.4 4 8.6E-05 35.6 12.5 95 89-190 97-194 (655)
138 PLN02654 acetate-CoA ligase 92.4 4.3 9.3E-05 35.6 12.6 96 89-190 102-200 (666)
139 TIGR02316 propion_prpE propion 92.0 5.1 0.00011 34.8 12.6 96 89-190 65-163 (628)
140 PRK13295 cyclohexanecarboxylat 91.5 4.7 0.0001 34.2 11.6 96 88-189 36-134 (547)
141 TIGR01217 ac_ac_CoA_syn acetoa 91.4 5.9 0.00013 34.6 12.4 94 90-190 98-194 (652)
142 PRK05857 acyl-CoA synthetase; 91.0 4.3 9.4E-05 34.4 11.0 92 88-189 26-120 (540)
143 PRK09088 acyl-CoA synthetase; 90.6 6.4 0.00014 32.7 11.5 91 89-189 8-101 (488)
144 PRK08315 AMP-binding domain pr 90.6 5.3 0.00011 33.8 11.2 91 89-189 29-122 (559)
145 PRK06087 short chain acyl-CoA 90.6 4.7 0.0001 34.1 10.8 91 88-189 35-128 (547)
146 PRK07656 long-chain-fatty-acid 90.5 4.8 0.0001 33.5 10.7 89 89-189 18-109 (513)
147 PLN03102 acyl-activating enzym 90.2 4.9 0.00011 34.5 10.6 90 88-189 26-118 (579)
148 PRK10524 prpE propionyl-CoA sy 90.0 8.1 0.00018 33.4 11.9 96 89-190 66-164 (629)
149 PLN02246 4-coumarate--CoA liga 89.9 5.6 0.00012 33.6 10.7 91 89-189 36-129 (537)
150 PRK12583 acyl-CoA synthetase; 89.6 8.7 0.00019 32.5 11.7 92 88-189 30-124 (558)
151 PRK07529 AMP-binding domain pr 89.6 9.1 0.0002 33.3 11.9 97 88-189 37-136 (632)
152 PRK13388 acyl-CoA synthetase; 89.6 6.7 0.00014 33.3 10.9 89 89-189 14-106 (540)
153 PRK07788 acyl-CoA synthetase; 89.5 4.1 8.9E-05 34.5 9.6 91 87-189 60-153 (549)
154 PF04443 LuxE: Acyl-protein sy 89.4 5.1 0.00011 32.6 9.6 33 88-120 86-118 (365)
155 TIGR03443 alpha_am_amid L-amin 89.3 6.2 0.00013 37.7 11.5 98 88-188 248-348 (1389)
156 PRK05605 long-chain-fatty-acid 88.8 7.1 0.00015 33.3 10.6 89 89-189 45-136 (573)
157 PRK06839 acyl-CoA synthetase; 88.7 9.2 0.0002 31.7 11.1 90 88-189 14-107 (496)
158 PRK08316 acyl-CoA synthetase; 88.6 9.1 0.0002 32.0 11.0 89 89-189 24-115 (523)
159 PRK07514 malonyl-CoA synthase; 88.5 11 0.00025 31.3 11.5 79 108-189 26-107 (504)
160 TIGR03098 ligase_PEP_1 acyl-Co 88.5 9.7 0.00021 31.8 11.1 89 89-189 13-104 (515)
161 PRK08008 caiC putative crotono 88.5 11 0.00023 31.7 11.3 95 88-189 19-116 (517)
162 PRK06187 long-chain-fatty-acid 88.0 11 0.00023 31.5 11.0 76 111-189 32-110 (521)
163 PRK13391 acyl-CoA synthetase; 87.8 11 0.00024 31.5 11.1 92 88-189 9-103 (511)
164 PLN02330 4-coumarate--CoA liga 87.8 9.7 0.00021 32.3 10.8 91 89-189 41-134 (546)
165 PRK07798 acyl-CoA synthetase; 87.7 9.9 0.00022 31.8 10.7 89 89-189 16-107 (533)
166 PRK05677 long-chain-fatty-acid 87.6 11 0.00023 32.2 10.9 88 89-188 37-128 (562)
167 PRK03640 O-succinylbenzoic aci 87.4 15 0.00033 30.3 11.6 91 87-189 13-106 (483)
168 PRK07470 acyl-CoA synthetase; 87.3 11 0.00024 31.6 10.8 77 110-189 32-111 (528)
169 PRK07059 Long-chain-fatty-acid 87.0 10 0.00023 32.1 10.5 89 89-189 36-127 (557)
170 TIGR02262 benz_CoA_lig benzoat 86.9 13 0.00028 31.1 10.9 89 89-189 18-109 (508)
171 PRK04319 acetyl-CoA synthetase 86.9 14 0.0003 31.5 11.3 78 109-189 72-152 (570)
172 PRK08279 long-chain-acyl-CoA s 86.9 11 0.00024 32.4 10.6 90 88-189 49-141 (600)
173 PLN02736 long-chain acyl-CoA s 86.8 14 0.00031 32.2 11.4 97 88-189 56-157 (651)
174 PRK13390 acyl-CoA synthetase; 86.4 17 0.00037 30.3 11.4 92 88-189 9-103 (501)
175 PRK06164 acyl-CoA synthetase; 86.2 13 0.00028 31.4 10.6 89 88-188 22-113 (540)
176 PRK06334 long chain fatty acid 86.2 9.5 0.00021 32.4 9.8 76 110-188 45-120 (539)
177 PRK05852 acyl-CoA synthetase; 85.9 16 0.00035 30.8 11.1 91 88-188 28-121 (534)
178 PF03321 GH3: GH3 auxin-respon 85.8 0.34 7.5E-06 41.2 1.0 32 87-118 76-108 (528)
179 TIGR03208 cyc_hxne_CoA_lg cycl 85.8 19 0.00042 30.4 11.5 96 88-189 34-132 (538)
180 PRK12492 long-chain-fatty-acid 85.6 12 0.00027 31.8 10.3 88 89-188 37-128 (562)
181 PLN02860 o-succinylbenzoate-Co 85.5 8.2 0.00018 32.9 9.1 77 110-189 32-111 (563)
182 PRK08751 putative long-chain f 85.4 8.9 0.00019 32.6 9.3 91 88-190 37-131 (560)
183 PRK13383 acyl-CoA synthetase; 85.3 8.9 0.00019 32.2 9.2 91 88-190 47-140 (516)
184 PRK06188 acyl-CoA synthetase; 85.2 18 0.00039 30.4 11.0 89 89-189 25-116 (524)
185 COG0365 Acs Acyl-coenzyme A sy 85.1 23 0.00051 30.4 11.6 92 92-190 25-120 (528)
186 TIGR01733 AA-adenyl-dom amino 84.7 14 0.0003 29.7 9.8 60 127-189 20-79 (408)
187 COG0318 CaiC Acyl-CoA syntheta 84.6 23 0.0005 30.2 11.4 92 88-189 23-117 (534)
188 PRK12582 acyl-CoA synthetase; 83.7 10 0.00022 32.8 9.1 96 88-189 61-164 (624)
189 KOG1176|consensus 83.5 9.6 0.00021 32.7 8.5 79 108-189 43-126 (537)
190 PRK08314 long-chain-fatty-acid 83.4 15 0.00031 31.1 9.7 89 89-189 23-115 (546)
191 PLN02479 acetate-CoA ligase 83.3 23 0.0005 30.2 11.0 90 88-189 32-124 (567)
192 PRK06155 crotonobetaine/carnit 83.3 14 0.00031 31.3 9.6 90 88-189 33-125 (542)
193 PRK08162 acyl-CoA synthetase; 83.2 13 0.00028 31.4 9.4 91 87-189 29-122 (545)
194 PRK04813 D-alanine--poly(phosp 82.9 13 0.00028 30.9 9.1 78 110-190 27-107 (503)
195 TIGR01923 menE O-succinylbenzo 82.8 17 0.00037 29.6 9.6 61 126-189 18-78 (436)
196 PRK08180 feruloyl-CoA synthase 82.4 13 0.00029 32.1 9.3 95 88-189 51-153 (614)
197 TIGR01734 D-ala-DACP-lig D-ala 82.0 17 0.00037 30.2 9.5 77 110-189 25-104 (502)
198 PRK09029 O-succinylbenzoic aci 81.5 20 0.00043 29.5 9.7 90 88-189 15-107 (458)
199 PRK08276 long-chain-fatty-acid 81.0 19 0.0004 30.1 9.4 78 110-190 11-91 (502)
200 PLN02861 long-chain-fatty-acid 80.8 18 0.00038 31.8 9.5 78 109-189 76-156 (660)
201 PLN02614 long-chain acyl-CoA s 80.3 16 0.00035 32.1 9.1 97 88-189 57-158 (666)
202 PRK08974 long-chain-fatty-acid 80.2 30 0.00064 29.4 10.5 88 89-188 36-127 (560)
203 PLN02249 indole-3-acetic acid- 79.3 1 2.3E-05 38.9 1.4 30 88-117 97-127 (597)
204 PRK07445 O-succinylbenzoic aci 79.2 29 0.00062 28.8 9.9 76 112-189 21-99 (452)
205 PLN02247 indole-3-acetic acid- 79.0 2.6 5.6E-05 36.6 3.6 31 88-118 86-117 (606)
206 PRK06710 long-chain-fatty-acid 78.4 21 0.00046 30.3 9.1 89 89-189 37-128 (563)
207 TIGR02275 DHB_AMP_lig 2,3-dihy 78.2 22 0.00048 29.9 9.1 90 88-189 35-127 (527)
208 PRK06178 acyl-CoA synthetase; 77.9 25 0.00055 29.9 9.4 90 89-190 46-138 (567)
209 PRK06018 putative acyl-CoA syn 77.7 20 0.00044 30.3 8.7 94 88-189 22-118 (542)
210 PRK12406 long-chain-fatty-acid 77.6 26 0.00055 29.3 9.2 77 110-189 11-90 (509)
211 PRK13382 acyl-CoA synthetase; 77.5 28 0.0006 29.5 9.5 91 87-189 54-147 (537)
212 PLN02574 4-coumarate--CoA liga 77.4 44 0.00096 28.4 10.8 91 89-189 52-146 (560)
213 PRK07787 acyl-CoA synthetase; 77.0 28 0.00062 28.8 9.3 75 110-189 25-99 (471)
214 PRK07786 long-chain-fatty-acid 76.8 30 0.00065 29.3 9.5 89 89-189 30-121 (542)
215 TIGR03205 pimA dicarboxylate-- 76.6 30 0.00066 29.2 9.5 77 110-189 46-125 (541)
216 PRK07867 acyl-CoA synthetase; 76.5 28 0.0006 29.5 9.2 78 110-190 28-109 (529)
217 PRK08308 acyl-CoA synthetase; 76.3 37 0.0008 27.6 9.6 77 110-189 8-86 (414)
218 PRK06060 acyl-CoA synthetase; 75.3 30 0.00064 30.5 9.4 88 89-189 19-109 (705)
219 PRK07638 acyl-CoA synthetase; 74.3 35 0.00077 28.3 9.2 90 88-189 13-104 (487)
220 PLN02387 long-chain-fatty-acid 73.5 36 0.00079 30.1 9.4 78 109-189 105-185 (696)
221 PRK05620 long-chain-fatty-acid 73.5 57 0.0012 27.8 11.1 93 88-189 22-118 (576)
222 PLN02430 long-chain-fatty-acid 72.3 35 0.00076 30.0 9.0 96 89-189 55-155 (660)
223 PRK05850 acyl-CoA synthetase; 72.2 61 0.0013 27.6 11.2 96 88-189 13-116 (578)
224 PRK06145 acyl-CoA synthetase; 71.2 49 0.0011 27.5 9.4 77 110-189 27-106 (497)
225 PRK07008 long-chain-fatty-acid 70.8 42 0.00092 28.4 9.0 77 110-189 39-118 (539)
226 PRK08633 2-acyl-glycerophospho 70.6 57 0.0012 30.5 10.4 92 87-189 626-719 (1146)
227 PRK10252 entF enterobactin syn 68.8 44 0.00095 31.7 9.4 77 110-189 483-562 (1296)
228 PLN02620 indole-3-acetic acid- 68.1 3.9 8.5E-05 35.5 2.2 31 88-118 98-129 (612)
229 PRK02261 methylaspartate mutas 68.0 32 0.0007 23.7 6.4 46 143-188 15-60 (137)
230 PRK12476 putative fatty-acid-- 67.9 80 0.0017 27.3 11.5 96 89-189 47-149 (612)
231 cd02067 B12-binding B12 bindin 65.6 36 0.00078 22.4 6.3 46 143-188 11-56 (119)
232 PRK09192 acyl-CoA synthetase; 65.4 74 0.0016 27.2 9.5 78 109-189 48-135 (579)
233 PF11040 DGF-1_C: Dispersed ge 64.3 4.7 0.0001 24.5 1.4 32 66-104 19-50 (87)
234 PTZ00216 acyl-CoA synthetase; 64.3 70 0.0015 28.3 9.3 80 107-189 118-200 (700)
235 PRK08043 bifunctional acyl-[ac 61.3 53 0.0011 29.1 8.0 77 110-189 231-309 (718)
236 PF00667 FAD_binding_1: FAD bi 57.5 3 6.5E-05 31.2 -0.3 28 10-37 43-70 (219)
237 KOG1177|consensus 56.6 1.1E+02 0.0023 26.3 8.3 78 108-188 75-155 (596)
238 PRK06814 acylglycerophosphoeth 55.9 1E+02 0.0022 29.0 9.2 77 110-189 658-736 (1140)
239 PTZ00342 acyl-CoA synthetase; 53.3 1.2E+02 0.0026 27.3 8.9 94 88-188 73-183 (746)
240 TIGR02370 pyl_corrinoid methyl 50.9 78 0.0017 23.2 6.3 46 143-188 96-141 (197)
241 cd02069 methionine_synthase_B1 50.2 82 0.0018 23.5 6.3 56 133-188 89-145 (213)
242 cd02071 MM_CoA_mut_B12_BD meth 49.6 76 0.0016 21.1 6.3 46 143-188 11-56 (122)
243 KOG1175|consensus 45.6 2.2E+02 0.0047 25.3 9.9 96 89-190 78-176 (626)
244 PRK07768 long-chain-fatty-acid 45.5 1.8E+02 0.0039 24.5 8.6 78 108-188 27-114 (545)
245 PF07538 ChW: Clostridial hydr 43.3 16 0.00036 18.8 1.2 12 99-110 16-27 (36)
246 cd06199 SiR Cytochrome p450- l 42.4 10 0.00022 30.7 0.5 27 9-35 31-57 (360)
247 PRK10946 entE enterobactin syn 40.6 2.2E+02 0.0049 24.0 8.8 88 90-189 37-127 (536)
248 PRK07769 long-chain-fatty-acid 39.9 2.5E+02 0.0055 24.3 12.2 96 89-189 34-136 (631)
249 cd06206 bifunctional_CYPOR The 39.8 12 0.00027 30.5 0.6 27 10-36 31-57 (384)
250 PF02310 B12-binding: B12 bind 38.0 1.1E+02 0.0024 19.8 5.9 47 141-188 10-57 (121)
251 PHA00736 hypothetical protein 37.4 23 0.0005 20.9 1.3 24 137-160 52-75 (79)
252 smart00728 ChW Clostridial hyd 35.9 22 0.00048 19.5 1.0 12 99-110 17-28 (46)
253 PRK07868 acyl-CoA synthetase; 33.5 4.1E+02 0.0089 24.9 10.7 87 87-188 458-547 (994)
254 cd06207 CyPoR_like NADPH cytoc 32.3 18 0.0004 29.5 0.5 26 10-35 32-57 (382)
255 COG1167 ARO8 Transcriptional r 31.9 3.1E+02 0.0067 23.0 8.9 55 129-189 176-233 (459)
256 TIGR01501 MthylAspMutase methy 31.3 1.8E+02 0.0038 20.0 6.2 46 143-188 13-58 (134)
257 cd06202 Nitric_oxide_synthase 31.0 20 0.00044 29.5 0.6 26 9-34 32-57 (406)
258 PF06871 TraH_2: TraH_2; Inte 30.8 69 0.0015 23.4 3.1 27 156-182 37-63 (206)
259 PRK06214 sulfite reductase; Pr 29.9 24 0.00052 30.3 0.8 28 9-36 202-229 (530)
260 cd06204 CYPOR NADPH cytochrome 29.7 22 0.00047 29.5 0.5 27 10-36 39-65 (416)
261 COG0853 PanD Aspartate 1-decar 29.5 22 0.00049 24.0 0.5 31 9-43 78-110 (126)
262 cd06203 methionine_synthase_re 29.5 24 0.00051 29.0 0.7 25 10-34 32-56 (398)
263 PF04312 DUF460: Protein of un 27.9 1.3E+02 0.0027 21.0 3.9 23 168-190 62-84 (138)
264 PRK10953 cysJ sulfite reductas 26.8 27 0.00058 30.5 0.6 26 9-34 271-296 (600)
265 smart00481 POLIIIAc DNA polyme 25.9 1E+02 0.0022 17.8 2.9 34 155-188 24-60 (67)
266 COG2967 ApaG Uncharacterized p 24.9 47 0.001 22.4 1.3 24 95-118 80-104 (126)
267 TIGR01931 cysJ sulfite reducta 24.3 32 0.00069 30.0 0.6 27 9-35 268-294 (597)
268 TIGR00223 panD L-aspartate-alp 23.5 33 0.00072 23.3 0.4 31 9-43 79-111 (126)
269 TIGR01237 D1pyr5carbox2 delta- 22.1 3.2E+02 0.0069 23.4 6.2 49 133-181 168-220 (511)
270 cd07125 ALDH_PutA-P5CDH Delta( 21.3 4E+02 0.0086 22.8 6.6 49 133-181 168-220 (518)
271 PF08679 DsrD: Dissimilatory s 21.1 40 0.00087 20.1 0.4 11 94-104 49-59 (67)
272 cd07083 ALDH_P5CDH ALDH subfam 20.9 3.7E+02 0.0079 22.9 6.3 49 133-181 155-207 (500)
273 PF13341 RAG2_PHD: RAG2 PHD do 20.8 30 0.00065 20.8 -0.2 7 1-7 30-36 (78)
274 cd07124 ALDH_PutA-P5CDH-RocA D 20.8 3.6E+02 0.0078 23.0 6.2 49 133-181 167-219 (512)
275 PRK03137 1-pyrroline-5-carboxy 20.7 3.6E+02 0.0077 23.1 6.2 49 133-181 172-224 (514)
276 PLN02242 methionine gamma-lyas 20.1 5.1E+02 0.011 21.5 8.0 53 133-186 115-167 (418)
No 1
>KOG1177|consensus
Probab=99.98 E-value=8.1e-32 Score=213.08 Aligned_cols=184 Identities=36% Similarity=0.599 Sum_probs=164.8
Q ss_pred ccCCCcccccccC-------------------------CCCCCccchhhhhhccCCCCCCCCCC----------------
Q psy13808 5 SRNRGEKEDRIGE-------------------------SQPFRERTLSHQDKIRPGRESNPRPS---------------- 43 (190)
Q Consensus 5 ~~~~~~~~~~v~i-------------------------~p~~~~~~l~~~l~~~~~~~i~~~~~---------------- 43 (190)
.+-|.++|||||+ ||.+..+|+++.|+..+.+++|..+.
T Consensus 95 l~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPE 174 (596)
T KOG1177|consen 95 LSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPE 174 (596)
T ss_pred HhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHH
Confidence 4568899999987 99999999999999999999998886
Q ss_pred -------CCCCCCCCCCcEEEEee-----cCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEe
Q psy13808 44 -------AYKADALPTKLTRLALR-----MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFL 111 (190)
Q Consensus 44 -------~~~~~~~~~~~~~i~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~ 111 (190)
.++...+|++.+++..+ .+..-+++++.....+.....+.......|+|++.|.|||||||.|||+-+
T Consensus 175 v~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatL 254 (596)
T KOG1177|consen 175 VMRGDPGQLKSELLPELTHVILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATL 254 (596)
T ss_pred hhcCCCccccccccccceEEEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceee
Confidence 44467788888888762 456778999888777666666666677889999999999999999999999
Q ss_pred chHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 112 THYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 112 sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
||.|++++......+.++.. ++++++..|+||.+|.+.+.++++..|+|+|++.+.|++.+.++.|.++|||.+++|
T Consensus 255 sH~~~~Nna~~vg~r~g~~e-~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gt 331 (596)
T KOG1177|consen 255 SHYNFLNNARAVGARAGYNE-KHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGT 331 (596)
T ss_pred ehhhhhhhHHHHHHHhCcCc-ceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecC
Confidence 99999999999999999998 899999999999999999999999999999998899999999999999999999986
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.95 E-value=9.3e-27 Score=191.79 Aligned_cols=165 Identities=15% Similarity=0.149 Sum_probs=129.0
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCc--------EEEEeecCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKL--------TRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
.+.+++++++..++++++|+++|++......+....+ .+++.......|++++........ ....+
T Consensus 96 f~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~~~~------~~~~~ 169 (528)
T COG0365 96 SPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASEKFE------FEPLP 169 (528)
T ss_pred ccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCCCCC------ccccC
Confidence 8999999999999999999999998844432221111 123322222667777765443321 23478
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHh-hhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI-GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
++|+++|+|||||||+||||+++|.++....... ...+.+.+ +|++++..+..|++|..+.++++|..|+++++++..
T Consensus 170 ~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~-~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~ 248 (528)
T COG0365 170 ADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLP-GDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGR 248 (528)
T ss_pred CCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCC-CCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCC
Confidence 9999999999999999999999999877665544 45667776 999999999999999888899999999999998644
Q ss_pred C--ChHHHHHHHHHCCceEEecc
Q psy13808 169 F--KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~--~~~~~~~~i~~~~iT~l~~t 189 (190)
. +++.+++.|++|++|+++++
T Consensus 249 p~~~~~~~~~~ie~~~vt~~~ts 271 (528)
T COG0365 249 PFYSPERLWEALEKYKVTIFGTS 271 (528)
T ss_pred CCCCHHHHHHHHHHhCCceEeeC
Confidence 3 39999999999999999864
No 3
>KOG1176|consensus
Probab=99.93 E-value=9.6e-26 Score=186.50 Aligned_cols=168 Identities=24% Similarity=0.293 Sum_probs=122.9
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEe--ecCcccHHHHHhcCC-Ccchhh--hhhhhcc
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLAL--RMGTFRLSDIMQGAG-PEYHRR--REQISKS 87 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~--~~~~~~~~~l~~~~~-~~~~~~--~~~~~~~ 87 (190)
||.+++.|+.++++.++|+++||+.+.... ..+. ..++++ ..+.....++..... ...... .+.....
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~--~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA--LKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRP 180 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC--CceEEEecccCccccccccccccchhhccccCCCccccc
Confidence 999999999999999999999999984431 1111 333333 112222222222111 000000 0000244
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
...+|++.|+|||||||.||||++||+++..+.........+.. .|+.++.+|++|.+|+...+++.+..|+++++. +
T Consensus 181 ~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~-~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~-~ 258 (537)
T KOG1176|consen 181 VSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTS-DDVYLCTLPLFHIYGLITLLLSLLAGGTTIICL-R 258 (537)
T ss_pred CCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCC-CceEEEechHHHHhHHHHHHHHHHhCCceEEEC-C
Confidence 56799999999999999999999999999998877777777776 899999999999999877555566777777766 8
Q ss_pred CCChHHHHHHHHHCCceEEecc
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.|+++.+++.|++|++|++.++
T Consensus 259 ~f~~~~~~~~i~kykvt~~~~v 280 (537)
T KOG1176|consen 259 KFDAELFLDLIEKYKVTHLFLV 280 (537)
T ss_pred CCCHHHHHHHHHHhCEEEEEcC
Confidence 8999999999999999999764
No 4
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.92 E-value=2.4e-24 Score=184.65 Aligned_cols=165 Identities=12% Similarity=0.054 Sum_probs=120.6
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC--CCC----CCCcEEEEeec------------C--cccHHHHHhcCCC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA--DAL----PTKLTRLALRM------------G--TFRLSDIMQGAGP 75 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--~~~----~~~~~~i~~~~------------~--~~~~~~l~~~~~~ 75 (190)
|+||.++++++++++++++++++|++.+.+.. ... +.++.++.+.. + ..++++++.....
T Consensus 133 pl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (666)
T PLN02614 133 PLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEG 212 (666)
T ss_pred EecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhccc
Confidence 45999999999999999999999998752210 111 12445554421 0 1345555443211
Q ss_pred cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc-----CCcCCCcEEEEeCCchhHHHHHH
Q psy13808 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL-----EFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
... ......++|+++|+|||||||.||||++||+|+...+......+ ++.+ +|++++.+|++|.++...
T Consensus 213 ~~~-----~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~-~d~~l~~lPl~H~~~~~~ 286 (666)
T PLN02614 213 KQY-----DLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV-KDVYLSYLPLAHIFDRVI 286 (666)
T ss_pred CCC-----CCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC-CcEEEEeccHHHHHHHHH
Confidence 100 01234679999999999999999999999999998766543332 4566 899999999999999754
Q ss_pred HHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+..+..|+++++. + +++..+++.|+++++|+++++
T Consensus 287 -~~~~l~~G~~v~~~-~-~~~~~~~~~i~~~~~T~~~~v 322 (666)
T PLN02614 287 -EECFIQHGAAIGFW-R-GDVKLLIEDLGELKPTIFCAV 322 (666)
T ss_pred -HHHHHHhCCEEEEe-C-CCHHHHHHHHHHhCCeEEEec
Confidence 56678899999987 3 699999999999999999864
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.91 E-value=5.7e-24 Score=182.01 Aligned_cols=165 Identities=15% Similarity=0.122 Sum_probs=127.9
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec--------------CcccHHHHHhcCCCc
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM--------------GTFRLSDIMQGAGPE 76 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~--------------~~~~~~~l~~~~~~~ 76 (190)
|+||.++++++.+++++++++++|++.+... ..+++.++.+++... ...+|++++......
T Consensus 132 pl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (651)
T PLN02736 132 PLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSS 211 (651)
T ss_pred EeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccC
Confidence 5599999999999999999999999876322 123455565555411 123455555432211
Q ss_pred chhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHH
Q psy13808 77 YHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156 (190)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l 156 (190)
.. ......++|+++|+|||||||.||||++||+++..+.......+++.+ +|++++.+|++|.+++. .++.++
T Consensus 212 ~~-----~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~-~d~~l~~lPl~h~~~~~-~~~~~l 284 (651)
T PLN02736 212 PQ-----PFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYP-SDVHISYLPLAHIYERV-NQIVML 284 (651)
T ss_pred CC-----CCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCC-CCEEEEeCCHHHHHHHH-HHHHHH
Confidence 10 112346899999999999999999999999999988887777778887 99999999999999975 477889
Q ss_pred HhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 157 NHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 157 ~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..|+++++.+ .++..+++.|+++++|+++++
T Consensus 285 ~~G~~i~~~~--~~~~~~~~~i~~~~~t~~~~v 315 (651)
T PLN02736 285 HYGVAVGFYQ--GDNLKLMDDLAALRPTIFCSV 315 (651)
T ss_pred HcCCEEEEeC--CCHHHHHHHHHHhCCcEEecc
Confidence 9999999873 488999999999999998864
No 6
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.91 E-value=3.6e-24 Score=178.91 Aligned_cols=175 Identities=18% Similarity=0.128 Sum_probs=121.1
Q ss_pred ccccccCCCCCCccchhhhhhccCCCCCCCCCCCCCC------CCCCCCcEEEEe--------ecCcccHHHHHhcCCC-
Q psy13808 11 KEDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA------DALPTKLTRLAL--------RMGTFRLSDIMQGAGP- 75 (190)
Q Consensus 11 ~~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~------~~~~~~~~~i~~--------~~~~~~~~~l~~~~~~- 75 (190)
.+--||+.+.++++++++.|+.++++++|++.+.+.. ...+....++.. ......++........
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISL 173 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchh
Confidence 3455777999999999999999999999999972221 111111111110 0000011110000000
Q ss_pred --cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC-CcCCCcEEEEeCCchhHHHHHHHH
Q psy13808 76 --EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE-FDKTDHKILLQVPMFHTFGTAMGI 152 (190)
Q Consensus 76 --~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~~ 152 (190)
..............++|++.|+|||||||.|||||+||+|+++++........ ..+ +|+.++++|+.|++...+..
T Consensus 174 ~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~-~d~~LsfLPlaHi~Er~~~~ 252 (613)
T COG1022 174 FLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGP-GDRVLSFLPLAHIFERAFEG 252 (613)
T ss_pred hhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCC-CcEEEEeCcHHHHHHHHHHH
Confidence 00000000113568999999999999999999999999999999999888886 777 99999999999999988755
Q ss_pred HHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 153 LNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 153 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+..|+++... .++..+++.++++|+|++++.
T Consensus 253 ~~~~~~g~~~~~~---~~~~~~~~dl~~~rPt~m~~V 286 (613)
T COG1022 253 GLALYGGVTVLFK---EDPRTLLEDLKEVRPTVMIGV 286 (613)
T ss_pred HHHhhcceEEEec---CCHHHHHHHHHHhCCeEEeec
Confidence 5555666555554 699999999999999999864
No 7
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.91 E-value=1.7e-23 Score=175.45 Aligned_cols=167 Identities=27% Similarity=0.332 Sum_probs=128.0
Q ss_pred CCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee--cCc--ccHHHHHhcCCCcchhhhhhhhcc
Q psy13808 17 ESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR--MGT--FRLSDIMQGAGPEYHRRREQISKS 87 (190)
Q Consensus 17 i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~--~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 87 (190)
+||.++.+++.++++.+++++++++..... ....+....++... ... ..++++.......... ...
T Consensus 93 ln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 167 (534)
T COG0318 93 LNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDAD-----ARP 167 (534)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcccc-----cCC
Confidence 399999999999999999999999987111 11112222222221 111 2456664433222111 112
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC--CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE--FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.+++|+++|+|||||||.||||++||+|++.+.......++ +.+ +|++++.+|+||.+|+...++.++..|+++++.
T Consensus 168 ~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~-~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~ 246 (534)
T COG0318 168 VDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTP-DDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLL 246 (534)
T ss_pred CCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCC-CceEEEecChHHHHHHHHHHHHHHHcCCEEEeC
Confidence 67899999999999999999999999999999888888887 777 899999999999999888788889999999998
Q ss_pred CC-CCChHHHHHHHHHCCceEEecc
Q psy13808 166 AP-SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~-~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++ .|+++.++..++++++|++.++
T Consensus 247 ~~~~f~~~~~~~~i~~~~~t~~~~v 271 (534)
T COG0318 247 SPEPFDPEEVLWLIEKYKVTVLSGV 271 (534)
T ss_pred CCCCcCHHHHHHHHHHhcceEEecc
Confidence 43 6999999999999999998764
No 8
>KOG1179|consensus
Probab=99.91 E-value=3.3e-24 Score=173.06 Aligned_cols=168 Identities=20% Similarity=0.260 Sum_probs=132.1
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCCCC--CCCCCCcE--EEEe----ecCcccHHHHHhcCCCcchhhhh-hhhccC
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAYKA--DALPTKLT--RLAL----RMGTFRLSDIMQGAGPEYHRRRE-QISKSL 88 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--~~~~~~~~--~i~~----~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~ 88 (190)
|++++.+-|.|.++.+++++++++++.+.. +.+|.+.. +-+. .......+++.......+..+.+ ......
T Consensus 160 NtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~~~~~~~ 239 (649)
T KOG1179|consen 160 NTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPVSTRSGL 239 (649)
T ss_pred ccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCcccCCCc
Confidence 999999999999999999999999984431 11233321 2222 11222344555444333322222 233456
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
...++++++|||||||.||.++++|..+......+...+++++ +|+++..+|+||..|.++++.+++..|+|+|+- .+
T Consensus 240 ~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~-~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~Vlr-kK 317 (649)
T KOG1179|consen 240 TFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTA-DDVVYTTLPLYHSAAGILGIGGCLLHGATVVLR-KK 317 (649)
T ss_pred cccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCc-cceEEEcchhHHHHHHHHHHHHHHhcCceEEEe-cc
Confidence 6778999999999999999999999999988777788899998 999999999999999999999999999999998 89
Q ss_pred CChHHHHHHHHHCCceEEe
Q psy13808 169 FKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~ 187 (190)
|++.++|+..++|+||+..
T Consensus 318 FSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 318 FSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred cchhhhHHHHHHhCCeeee
Confidence 9999999999999999864
No 9
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.91 E-value=1.1e-23 Score=175.21 Aligned_cols=176 Identities=13% Similarity=0.047 Sum_probs=125.5
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCC------C-CC---CCCCCcEEEEee-c---------CcccHHHHHh
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAY------K-AD---ALPTKLTRLALR-M---------GTFRLSDIMQ 71 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~------~-~~---~~~~~~~~i~~~-~---------~~~~~~~l~~ 71 (190)
+..|++|+.++++|+.++|++++++++|++.... . .. .....+.++... . +...+++++.
T Consensus 19 av~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (499)
T PLN03051 19 CVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGEPVAVPLREQDLSWCDFLG 98 (499)
T ss_pred CEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCcccCCccccCcccHHHHHh
Confidence 5678999999999999999999999999986421 0 00 001112222211 0 1234555543
Q ss_pred cCCCcc-hhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH
Q psy13808 72 GAGPEY-HRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 72 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
...... ............++|+++|+|||||||.||||+++|++++.+.......+++.+ +|++++.+|++|..++ +
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~-~ 176 (499)
T PLN03051 99 VAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQP-GDVVCWPTNLGWMMGP-W 176 (499)
T ss_pred hhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCC-CCEEEEccCcceeeeh-H
Confidence 211100 000000012235689999999999999999999999998876655555667777 8999999999999985 4
Q ss_pred HHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.++..|+++++.+..++++.+++.|+++++|++.++
T Consensus 177 ~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~v 215 (499)
T PLN03051 177 LLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLV 215 (499)
T ss_pred HHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeC
Confidence 578899999999998545889999999999999999864
No 10
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.91 E-value=1.5e-23 Score=181.02 Aligned_cols=170 Identities=15% Similarity=0.049 Sum_probs=120.4
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeecCc---------------------------
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRMGT--------------------------- 63 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~~~--------------------------- 63 (190)
|+++.++++++.++|+++++++++++.+.+. ...++.++.+++++...
T Consensus 159 pl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (746)
T PTZ00342 159 VMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNK 238 (746)
T ss_pred EecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccc
Confidence 4499999999999999999999999765322 23456777777652100
Q ss_pred ---------------------------ccHHHHHhcCCCc--c---hhhh------hhhhccCCCCCeEEEEecCCCCCC
Q psy13808 64 ---------------------------FRLSDIMQGAGPE--Y---HRRR------EQISKSLNCRDGINIQFTSGTTGH 105 (190)
Q Consensus 64 ---------------------------~~~~~l~~~~~~~--~---~~~~------~~~~~~~~~~~~~~i~~TSGTTG~ 105 (190)
..|.++....... . .... ........++|+++|+|||||||.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~ 318 (746)
T PTZ00342 239 EEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGK 318 (746)
T ss_pred ccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCC
Confidence 0011111110000 0 0000 001123568999999999999999
Q ss_pred CceeEechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCc
Q psy13808 106 PKAAFLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183 (190)
Q Consensus 106 PKgv~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~i 183 (190)
||||++||+|+++.+....... .... .+++++++|++|++++.. .+.++..|+++++.+ . ++..+++.|+++++
T Consensus 319 PKGVmlTH~nl~~~~~~~~~~~~~~~~~-~d~~ls~LPL~Hi~~~~~-~~~~l~~G~~i~~~~-~-~~~~l~~di~~~~p 394 (746)
T PTZ00342 319 PKGVMLSNKNLYNTVVPLCKHSIFKKYN-PKTHLSYLPISHIYERVI-AYLSFMLGGTINIWS-K-DINYFSKDIYNSKG 394 (746)
T ss_pred CCEEEEccHHHHHHHHHHhhcccccCCC-CCeEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeC-C-CHHHHHHHHHHhCC
Confidence 9999999999998776544322 1223 689999999999999765 567899999999983 3 89999999999999
Q ss_pred eEEecc
Q psy13808 184 MEYLTK 189 (190)
Q Consensus 184 T~l~~t 189 (190)
|+++++
T Consensus 395 T~~~~V 400 (746)
T PTZ00342 395 NILAGV 400 (746)
T ss_pred cEEEch
Confidence 999863
No 11
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.90 E-value=2.8e-23 Score=178.00 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=121.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCC-CCCcEEEEeecC--------------cccHHHHHhcCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADAL-PTKLTRLALRMG--------------TFRLSDIMQGAG 74 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~-~~~~~~i~~~~~--------------~~~~~~l~~~~~ 74 (190)
||++|.++++++.++|++++++++|++.+.+. .... +.++.++.+... ..+|.+++....
T Consensus 130 vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (660)
T PLN02861 130 VPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGS 209 (660)
T ss_pred EEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCc
Confidence 35599999999999999999999999865321 1111 235555544210 134555544321
Q ss_pred CcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC-----CcCCCcEEEEeCCchhHHHHH
Q psy13808 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE-----FDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~g~~ 149 (190)
... ......++|+++|+|||||||.||||++||+++..........++ +.+ +|++++.+|++|.++..
T Consensus 210 ~~~------~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~-~d~~l~~lPl~H~~~~~ 282 (660)
T PLN02861 210 LDC------ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATE-EDSYFSYLPLAHVYDQV 282 (660)
T ss_pred ccC------CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCC-CCEEEEECcHHHHHHHH
Confidence 110 112346899999999999999999999999999987665544433 345 89999999999999976
Q ss_pred HHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+ .+.++..|+++++. ++++..+++.|+++++|+++++
T Consensus 283 ~-~~~~l~~G~~v~~~--~~~~~~~~~~i~~~~~T~~~~v 319 (660)
T PLN02861 283 I-ETYCISKGASIGFW--QGDIRYLMEDVQALKPTIFCGV 319 (660)
T ss_pred H-HHHHHHhCCEEEEe--CCCHHHHHHHHHHhCCcEEeec
Confidence 6 45579999999987 3689999999999999999864
No 12
>PLN02654 acetate-CoA ligase
Probab=99.90 E-value=4.7e-23 Score=176.78 Aligned_cols=167 Identities=13% Similarity=0.061 Sum_probs=120.5
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCC------------------CCcEEEEeec--------------Cc
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADALP------------------TKLTRLALRM--------------GT 63 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~------------------~~~~~i~~~~--------------~~ 63 (190)
++++.++++++.+++++++|+++|++.......+.. ....++.... ..
T Consensus 174 pv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (666)
T PLN02654 174 VVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRD 253 (666)
T ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCc
Confidence 458999999999999999999999987633211100 0111111110 01
Q ss_pred ccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHH-HHHhhhhcCCcCCCcEEEEeCCc
Q psy13808 64 FRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN-SNFIGKRLEFDKTDHKILLQVPM 142 (190)
Q Consensus 64 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl 142 (190)
..|++++..... ......++++|+++|+|||||||.||||+++|++++.. .......+++.+ +|++++..|+
T Consensus 254 ~~~~~~~~~~~~------~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~ 326 (666)
T PLN02654 254 VWWQDVVPNYPT------KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKP-TDVYWCTADC 326 (666)
T ss_pred ccHHHHhhcCCC------CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCC-CcEEEEcCCc
Confidence 112333221110 01122357899999999999999999999999998643 344556678887 9999999999
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+|.+|..+.++.+|..|++++++++ .++++.+++.|++|++|+++++
T Consensus 327 ~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 376 (666)
T PLN02654 327 GWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTA 376 (666)
T ss_pred hhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeC
Confidence 9999987778899999999999853 2589999999999999999763
No 13
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.90 E-value=4.7e-23 Score=178.07 Aligned_cols=171 Identities=17% Similarity=0.144 Sum_probs=122.7
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCC-CCC--------CcEEEEee-----------cCcccHHHHHhcCCC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADA-LPT--------KLTRLALR-----------MGTFRLSDIMQGAGP 75 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-~~~--------~~~~i~~~-----------~~~~~~~~l~~~~~~ 75 (190)
+++|.++++++.+++++++|+++|+++......+ .+. ...++++. .....|++++.....
T Consensus 262 pi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (728)
T PLN03052 262 SIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANG 341 (728)
T ss_pred eeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCccHHHHHhcccc
Confidence 4489999999999999999999999875321110 000 01122221 123456666543211
Q ss_pred cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHH
Q psy13808 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 155 (190)
.... .........++++++|+|||||||+||||+++|.+++.........+++.+ +|++++..|++|.++. +.++.+
T Consensus 342 ~~~~-~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~-~d~~~~~~~l~w~~g~-~~v~~~ 418 (728)
T PLN03052 342 LRRP-DEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRK-GDIVCWPTNLGWMMGP-WLVYAS 418 (728)
T ss_pred cccc-ccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCC-CcEEEECCCcHHHhHH-HHHHHH
Confidence 0000 000112235689999999999999999999999998776655555577877 9999999999999995 567899
Q ss_pred HHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 156 l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
|..|++++++++.+++..+++.++++++|++.++
T Consensus 419 L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~ 452 (728)
T PLN03052 419 LLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTV 452 (728)
T ss_pred HHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEEC
Confidence 9999999999655677889999999999999864
No 14
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.90 E-value=6.8e-23 Score=174.76 Aligned_cols=168 Identities=11% Similarity=0.022 Sum_probs=123.3
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCC--------------C-CCCCcEEEEeec----------CcccHHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKAD--------------A-LPTKLTRLALRM----------GTFRLSDIM 70 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~--------------~-~~~~~~~i~~~~----------~~~~~~~l~ 70 (190)
+++|.++++++.+++++++|+++|++....... . .+....++++.. ....+.++.
T Consensus 137 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 216 (628)
T TIGR02316 137 VVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDVDYAALR 216 (628)
T ss_pred ecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccccHHHHh
Confidence 558999999999999999999999986522110 0 122334444421 123445444
Q ss_pred hcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHH-HHHhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 71 QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN-SNFIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
....... .+.....++++++|+|||||||.||||+++|.++... .......+++.+ +|++++..|++|..|..
T Consensus 217 ~~~~~~~-----~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~g~~ 290 (628)
T TIGR02316 217 TQHEDAQ-----VPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRA-GQVMFSASDVGWVVGHS 290 (628)
T ss_pred hccccCC-----CCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCC-CcEEEEcCCCCeeehhh
Confidence 3321110 0112356799999999999999999999999997643 344455677877 89999999999999877
Q ss_pred HHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++.+|..|+++++++. .+++..+++.|+++++|+++++
T Consensus 291 ~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 333 (628)
T TIGR02316 291 YIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSA 333 (628)
T ss_pred HHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeC
Confidence 778999999999999853 3589999999999999998764
No 15
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.90 E-value=8e-23 Score=172.46 Aligned_cols=168 Identities=21% Similarity=0.281 Sum_probs=132.4
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC---CCCCCCcEEEEee------cCcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA---DALPTKLTRLALR------MGTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~---~~~~~~~~~i~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
|+++|.++++++.++++.+++++++++...... ..++..+.++... .+..++.+++....... ..
T Consensus 126 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 199 (570)
T PRK04319 126 GPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASDEF------DI 199 (570)
T ss_pred cccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCCcC------Cc
Confidence 355899999999999999999999998773321 2344555555441 12245555554332211 11
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
....++++++++|||||||.||||+++|+++..........+++.+ +|++++..|++|.+|..+.++.++..|+++++.
T Consensus 200 ~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 200 EWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHE-DDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred cccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCC-CceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 2346789999999999999999999999999988777777778887 999999999999999888899999999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+..++++.+++.|+++++|+++++
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~ 302 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTA 302 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeC
Confidence 668999999999999999998763
No 16
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.89 E-value=1.2e-22 Score=170.42 Aligned_cols=175 Identities=16% Similarity=0.078 Sum_probs=124.5
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CCC----C-CCcEEEEeec--CcccHHHHHhcCC--Ccchhhh--
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DAL----P-TKLTRLALRM--GTFRLSDIMQGAG--PEYHRRR-- 81 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~----~-~~~~~i~~~~--~~~~~~~l~~~~~--~~~~~~~-- 81 (190)
-|++||.++.+++.++|+++++++++++.+.... .+. . ....++.... ....+.+...... ..+....
T Consensus 94 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (539)
T PRK06334 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFEWLMR 173 (539)
T ss_pred eEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCchhhhh
Confidence 4566999999999999999999999998752211 000 0 0112332211 1111111111000 0000000
Q ss_pred hhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 82 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
.......+++++++|+|||||||.||||+++|+++..+.......+++.+ +|++++.+|++|.+|+...++.++..|++
T Consensus 174 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~G~~ 252 (539)
T PRK06334 174 WFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKE-DDVMMSFLPPFHAYGFNSCTLFPLLSGVP 252 (539)
T ss_pred cccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCC-CceEEEecchHhhhhhHHHHHHHHHcCCe
Confidence 00012357799999999999999999999999999988777667777877 99999999999999987777889999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++....++++.+++.|+++++|++.++
T Consensus 253 vv~~~~~~~~~~~~~~i~~~~~t~~~~~ 280 (539)
T PRK06334 253 VVFAYNPLYPKKIVEMIDEAKVTFLGST 280 (539)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEec
Confidence 9997556899999999999999999764
No 17
>KOG1256|consensus
Probab=99.89 E-value=8.3e-23 Score=169.84 Aligned_cols=171 Identities=15% Similarity=0.117 Sum_probs=133.9
Q ss_pred ccccccCCCCCCccchhhhhhccCCCCCCCCCC-CC----C---CCCCCCCcEEEEe----------ecC----cccHHH
Q psy13808 11 KEDRIGESQPFRERTLSHQDKIRPGRESNPRPS-AY----K---ADALPTKLTRLAL----------RMG----TFRLSD 68 (190)
Q Consensus 11 ~~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~-~~----~---~~~~~~~~~~i~~----------~~~----~~~~~~ 68 (190)
.+--||+...+++++++++++.++..++|++.+ .+ . ...+|.++.+|.+ ... ..+|++
T Consensus 157 ~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e 236 (691)
T KOG1256|consen 157 SLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDE 236 (691)
T ss_pred CCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHH
Confidence 355789999999999999999999999999965 11 1 1247888988887 122 678999
Q ss_pred HHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHh--hhhc----CCcCCCcEEEEeCCc
Q psy13808 69 IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI--GKRL----EFDKTDHKILLQVPM 142 (190)
Q Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~--~~~~----~~~~~~~~~l~~~pl 142 (190)
++..+....... .....|+|.+.|.|||||||.|||||+||+|++...... .... .... +|++++++||
T Consensus 237 ~~~lG~~~~~~~----~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~-~dv~lSyLPL 311 (691)
T KOG1256|consen 237 FEELGKKNQRKP----RVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVG-DDVYLSYLPL 311 (691)
T ss_pred HHhhcccccCCC----CCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccccccc-CceEEEeCcH
Confidence 999886443221 135689999999999999999999999999999854321 1111 2222 7999999999
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.|++..++..+ .+..|+++.+. +-|+..+.+.+++.++|++.+.
T Consensus 312 AHi~er~~~~~-~~~~G~~IgF~--~gD~~~l~~dlk~lkPT~f~~V 355 (691)
T KOG1256|consen 312 AHIFERVVELY-TFYIGAKIGFA--RGDILKLTDDLKELKPTVFPGV 355 (691)
T ss_pred HHHHHHHHHHh-HhhcccEEEEe--cCChHHHHHHHHHhCCcEEecc
Confidence 99999888644 45889999998 3799999999999999998764
No 18
>PRK07529 AMP-binding domain protein; Validated
Probab=99.89 E-value=5.5e-22 Score=169.34 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=129.2
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEeec--------------------
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALRM-------------------- 61 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~~-------------------- 61 (190)
|.-++|||.++++++.++++.+++++++++..... ....+..+.++.+..
T Consensus 107 Gi~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (632)
T PRK07529 107 GIANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAH 186 (632)
T ss_pred CEEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccccc
Confidence 33457899999999999999999999999865321 123345555554311
Q ss_pred -CcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeC
Q psy13808 62 -GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQV 140 (190)
Q Consensus 62 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (190)
+...+.+.+........ .......++++++|+|||||||.||+|+++|+++..+.......+++.+ ++++++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~ 261 (632)
T PRK07529 187 ARILDFDAELARQPGDRL----FSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGP-GDTVFCGL 261 (632)
T ss_pred cccCCHHHHHhcCCCccc----cccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCC-CCEEEEec
Confidence 12244444443221110 0112346799999999999999999999999999988877777777777 99999999
Q ss_pred CchhHHHHHHHHHHHHHhCCEEEEcCC-CC----ChHHHHHHHHHCCceEEecc
Q psy13808 141 PMFHTFGTAMGILNAMNHGSTTVVPAP-SF----KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 141 pl~h~~g~~~~~~~~l~~G~~vv~~~~-~~----~~~~~~~~i~~~~iT~l~~t 189 (190)
|++|.++....++.++..|+++++.++ .+ ....+++.++++++|++.++
T Consensus 262 pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 315 (632)
T PRK07529 262 PLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGV 315 (632)
T ss_pred CchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeH
Confidence 999999988788999999999999743 12 24689999999999998763
No 19
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.89 E-value=5e-22 Score=170.14 Aligned_cols=163 Identities=15% Similarity=0.109 Sum_probs=118.5
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCCC--------------CCCCCCCcEEEEee------------cCcccHHHHHh
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAYK--------------ADALPTKLTRLALR------------MGTFRLSDIMQ 71 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~~--------------~~~~~~~~~~i~~~------------~~~~~~~~l~~ 71 (190)
||.++++++.+++++++|+++|++..... ...++.++.++++. .+...|++++.
T Consensus 170 ~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (652)
T TIGR01217 170 SPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLEDFTA 249 (652)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHHHHh
Confidence 89999999999999999999999875221 12334455555431 12234555544
Q ss_pred cCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHH-HHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH
Q psy13808 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN-NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~-~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
....... ......++++++|+|||||||.||||+++|++++. ........+++.+ +|++++..|++|..+ .+
T Consensus 250 ~~~~~~~-----~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~-~~ 322 (652)
T TIGR01217 250 AAQAAEL-----VFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGP-GDRLFYYTTTGWMMW-NW 322 (652)
T ss_pred cccCCCC-----CceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCC-CcEEEEeCCcchhhh-HH
Confidence 3211100 01234678999999999999999999999998754 3444455677887 899999999999864 33
Q ss_pred HHHHHHHhCCEEEEcCC--C-CChHHHHHHHHHCCceEEec
Q psy13808 151 GILNAMNHGSTTVVPAP--S-FKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~--~-~~~~~~~~~i~~~~iT~l~~ 188 (190)
++.+|..|++++++++ . .++..+++.++++++|++.+
T Consensus 323 -~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~ 362 (652)
T TIGR01217 323 -LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGT 362 (652)
T ss_pred -HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEec
Confidence 5689999999999842 2 37899999999999999754
No 20
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.88 E-value=1e-21 Score=164.92 Aligned_cols=173 Identities=23% Similarity=0.215 Sum_probs=131.9
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEe-ecCcccHHHHHhcCCCcchhh--
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLAL-RMGTFRLSDIMQGAGPEYHRR-- 80 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~-~~~~~~~~~l~~~~~~~~~~~-- 80 (190)
.|+++|.++.+++.++++++++++++++..... ...++..+.++.+ ..+..++.+++..........
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (547)
T PRK13295 107 LNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPAWEQEPDAP 186 (547)
T ss_pred EeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCccccccccc
Confidence 456799999999999999999999999875211 1223444455544 223345666554321111000
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
.........++++++|+|||||||.||||+++|+++..........+++.+ ++++++..|++|..++++.++.++..|+
T Consensus 187 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~l~~~p~~h~~g~~~~~~~~l~~G~ 265 (547)
T PRK13295 187 AILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGA-DDVILMASPMAHQTGFMYGLMMPVMLGA 265 (547)
T ss_pred cccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCC-CCeEEEecCchhhhhHHHHHHHHHHcCC
Confidence 001112346789999999999999999999999999988877777788887 9999999999999998888999999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
++++. +.++++.+++.++++++|++.+
T Consensus 266 ~~~~~-~~~~~~~~~~~l~~~~vt~~~~ 292 (547)
T PRK13295 266 TAVLQ-DIWDPARAAELIRTEGVTFTMA 292 (547)
T ss_pred eEEeC-CCCCHHHHHHHHHHcCCcEEEe
Confidence 99998 6889999999999999999865
No 21
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.88 E-value=4.7e-22 Score=167.62 Aligned_cols=172 Identities=20% Similarity=0.209 Sum_probs=123.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC------CCCCCCCcEEEEeecC----cccHHHHHhcCCCcch-hhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK------ADALPTKLTRLALRMG----TFRLSDIMQGAGPEYH-RRREQ 83 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~i~~~~~----~~~~~~l~~~~~~~~~-~~~~~ 83 (190)
+++||.++++++.++++++++++++++..... ...++....++..... ...+.+++........ .....
T Consensus 85 vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (563)
T PLN02860 85 APLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTTE 164 (563)
T ss_pred EeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCcccccc
Confidence 34599999999999999999999999875211 1223333333333111 0111222111100000 00000
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
......++++++|+|||||||.||||+++|+++..+.......+++.+ +|+++...|++|.+|+. .++.++..|++++
T Consensus 165 ~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~v 242 (563)
T PLN02860 165 LDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLS-SALAMLMVGACHV 242 (563)
T ss_pred ccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCC-CCEEEEecCchhhccHH-HHHHHHHcCceEE
Confidence 112346789999999999999999999999999887766666778887 89999999999999965 4788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+. +.+++..+++.|+++++|++.++
T Consensus 243 ~~-~~~~~~~~~~~i~~~~vt~~~~~ 267 (563)
T PLN02860 243 LL-PKFDAKAALQAIKQHNVTSMITV 267 (563)
T ss_pred ec-CCCCHHHHHHHHHHhCCeeEEeC
Confidence 98 68999999999999999998764
No 22
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.88 E-value=7.9e-22 Score=167.85 Aligned_cols=170 Identities=19% Similarity=0.220 Sum_probs=120.6
Q ss_pred cCCCCCC-----ccchhhhhhccCCCCCCCCCCC-----CCCCCCCCCcEEEEeec-----CcccHHHHHhcCCCcchhh
Q psy13808 16 GESQPFR-----ERTLSHQDKIRPGRESNPRPSA-----YKADALPTKLTRLALRM-----GTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 16 ~i~p~~~-----~~~l~~~l~~~~~~~i~~~~~~-----~~~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~~~~~~~ 80 (190)
++||.++ .+++.++++++++++++++... +.... .....++.... +..++.+++........
T Consensus 123 pl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (614)
T PRK08180 123 PVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVV-PADVEVVAVRGAVPGRAATPFAALLATPPTAAV-- 199 (614)
T ss_pred eeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhc-cCCceEEEecCCCCCcccccHHHHhccccccch--
Confidence 4588888 7999999999999999998641 11111 11122222211 12456666543211110
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcC-CCcEEEEeCCchhHHHHHHHHHHHHHhC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK-TDHKILLQVPMFHTFGTAMGILNAMNHG 159 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~-~~~~~l~~~pl~h~~g~~~~~~~~l~~G 159 (190)
........++|+++|+|||||||.||||++||+++..+.......+++.. .++++++.+|++|.+|+.+.++.++..|
T Consensus 200 -~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G 278 (614)
T PRK08180 200 -DAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNG 278 (614)
T ss_pred -hhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhcC
Confidence 01112346799999999999999999999999999988776666665531 2689999999999999877788899999
Q ss_pred CEEEEcCCCCCh---HHHHHHHHHCCceEEecc
Q psy13808 160 STTVVPAPSFKP---MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 160 ~~vv~~~~~~~~---~~~~~~i~~~~iT~l~~t 189 (190)
+++++.+..+++ ..+++.++++++|+++++
T Consensus 279 ~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~v 311 (614)
T PRK08180 279 GTLYIDDGKPTPGGFDETLRNLREISPTVYFNV 311 (614)
T ss_pred CEEEEeCCCccchhHHHHHHHHHHhCCcEEech
Confidence 999997434554 477899999999998753
No 23
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.88 E-value=7e-22 Score=165.48 Aligned_cols=164 Identities=18% Similarity=0.207 Sum_probs=126.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CCC-CCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DAL-PTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
|++||.++.+++.++++++++++++++...... ..+ +... ++.. ....+.+++........ ......+++
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~~~~~~~-----~~~~~~~~~ 153 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVR-VINV--DSPAWADELAAHRDAEP-----PFRVADPDD 153 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCce-EEEe--ccccHHHHhcccCCCCC-----CcccCCccc
Confidence 466999999999999999999999999874331 111 1111 1221 12235554432211110 112356789
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChH
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~ 172 (190)
+++++|||||||.||||+++|+++..+.......+++.. +|+++...|++|..++...++.++..|+++++. ++++++
T Consensus 154 ~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~-~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~ 231 (529)
T PRK07867 154 LFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGP-DDVCYVSMPLFHSNAVMAGWAVALAAGASIALR-RKFSAS 231 (529)
T ss_pred eEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCc-ccEEEEecchhHHHHHHHHHHHHHhcCceEEec-CCCCHH
Confidence 999999999999999999999999988877778888887 999999999999999877778889999999998 789999
Q ss_pred HHHHHHHHCCceEEec
Q psy13808 173 DSLRAIAKEKCMEYLT 188 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~ 188 (190)
.+++.++++++|++.+
T Consensus 232 ~~~~~i~~~~vt~~~~ 247 (529)
T PRK07867 232 GFLPDVRRYGATYANY 247 (529)
T ss_pred HHHHHHHHhCCeEEec
Confidence 9999999999999864
No 24
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.88 E-value=2.2e-21 Score=165.71 Aligned_cols=167 Identities=16% Similarity=0.181 Sum_probs=123.9
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC--------------CCCCCCcEEEEeec----------CcccHHHHHh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA--------------DALPTKLTRLALRM----------GTFRLSDIMQ 71 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------------~~~~~~~~~i~~~~----------~~~~~~~l~~ 71 (190)
+++|.++.+++.+++++++++++++++..... ...+..+.+++... ....++++..
T Consensus 152 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (637)
T PRK00174 152 VVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHELVA 231 (637)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHHHh
Confidence 45999999999999999999999998763211 11234445544311 1122444443
Q ss_pred cCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHH-HhhhhcCCcCCCcEEEEeCCchhHHHHHH
Q psy13808 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN-FIGKRLEFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~-~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
...... ......++++++|+|||||||.||||+++|++++.+.. .....+++.+ +|++++..|++|..+..+
T Consensus 232 ~~~~~~------~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~ 304 (637)
T PRK00174 232 GASDEC------EPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKD-GDVYWCTADVGWVTGHSY 304 (637)
T ss_pred hcCCCC------CccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCC-CcEEEEcCCchHhhhhHH
Confidence 221110 12345678999999999999999999999999875543 3344567777 899999999999999777
Q ss_pred HHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 151 GILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+|..|+++++++. .++++.+++.|+++++|++.++
T Consensus 305 ~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 346 (637)
T PRK00174 305 IVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTA 346 (637)
T ss_pred HHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeec
Confidence 78999999999999742 2589999999999999998764
No 25
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.88 E-value=2.2e-21 Score=165.35 Aligned_cols=167 Identities=17% Similarity=0.165 Sum_probs=123.1
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC--------------CCCC-CCcEEEEeec----------CcccHHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA--------------DALP-TKLTRLALRM----------GTFRLSDIM 70 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------------~~~~-~~~~~i~~~~----------~~~~~~~l~ 70 (190)
+++|.++++++.+++++++|+++|+++..... ...+ ..+.+++... ....+++++
T Consensus 142 ~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (625)
T TIGR02188 142 VVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWWHDLM 221 (625)
T ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccHHHHH
Confidence 44899999999999999999999998763211 1122 3444444311 112244444
Q ss_pred hcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHH-HhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 71 QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN-FIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~-~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
...... ......+++++++|+|||||||.||||+++|+++..+.. .....+++.+ +|++++..|++|..+..
T Consensus 222 ~~~~~~------~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~g~~ 294 (625)
T TIGR02188 222 AKASAY------CEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKD-GDIFWCTADVGWITGHS 294 (625)
T ss_pred hhcCCC------CCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCC-CcEEEECCCchhhhccH
Confidence 332111 112345778999999999999999999999999875443 3444567777 89999999999999877
Q ss_pred HHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++.+|..|+++++++. .+++..+++.|+++++|++.++
T Consensus 295 ~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 337 (625)
T TIGR02188 295 YIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTA 337 (625)
T ss_pred HHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeC
Confidence 778999999999999842 2589999999999999998764
No 26
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.88 E-value=1.2e-21 Score=164.62 Aligned_cols=164 Identities=24% Similarity=0.206 Sum_probs=125.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEee-------cCcccHHHHHhcCCCcchhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALR-------MGTFRLSDIMQGAGPEYHRRRE 82 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~-------~~~~~~~~l~~~~~~~~~~~~~ 82 (190)
|++||.++.+++.++++++++++++++.+.... ...+....++... .+...+++++.......
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 201 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSSTAP----- 201 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCCCC-----
Confidence 344999999999999999999999998763221 1122222222211 23345666655322211
Q ss_pred hhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 83 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
....+++.++++|||||||.||||+++|+++..........+++.+ ++++++..|++|..|+.. ++.++..|+++
T Consensus 202 ---~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g~~~-~~~~l~~G~~~ 276 (549)
T PRK07788 202 ---LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRA-GETTLLPAPMFHATGWAH-LTLAMALGSTV 276 (549)
T ss_pred ---CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCc-CCeEEEccchHHHHHHHH-HHHHHHhCCEE
Confidence 1234578899999999999999999999999988777777777877 899999999999999654 67789999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. ..++++.+++.++++++|++.++
T Consensus 277 v~~-~~~~~~~~~~~i~~~~vt~~~~~ 302 (549)
T PRK07788 277 VLR-RRFDPEATLEDIAKHKATALVVV 302 (549)
T ss_pred EEC-CCCCHHHHHHHHHHhCCcEEEEH
Confidence 998 78999999999999999998864
No 27
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.88 E-value=1.1e-21 Score=166.41 Aligned_cols=173 Identities=16% Similarity=0.184 Sum_probs=126.8
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEeecC----cccHHHHHhcCCCcchhhhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALRMG----TFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~~~----~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
-+++++.++.+++.++++.+++++++++.+.... ........++..... ...+.++.......+.. ....
T Consensus 114 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 192 (600)
T PRK08279 114 VALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTT-NPAS 192 (600)
T ss_pred EeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCcc-CCCc
Confidence 3455899999999999999999999998763221 111111222221111 12333433322111100 0111
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.....++++++|+|||||||.||||+++|+++.+++......+++.+ +|++++.+|++|.+|+...++.++..|+++++
T Consensus 193 ~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~-~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~ 271 (600)
T PRK08279 193 RSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTP-DDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL 271 (600)
T ss_pred ccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCC-CcEEEEecCchhhhhHHHHHHHHHhcCcEEEE
Confidence 23346789999999999999999999999999998888777788887 99999999999999988777788889999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
. +.+++..+++.++++++|++.++
T Consensus 272 ~-~~~~~~~~~~~i~~~~~t~~~~~ 295 (600)
T PRK08279 272 R-RKFSASRFWDDVRRYRATAFQYI 295 (600)
T ss_pred c-CCCCHHHHHHHHHHhcceEEeeh
Confidence 8 78999999999999999998753
No 28
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.87 E-value=3.6e-21 Score=161.30 Aligned_cols=173 Identities=20% Similarity=0.208 Sum_probs=130.4
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEee-cCcccHHHHHhcCCCcchhh--
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALR-MGTFRLSDIMQGAGPEYHRR-- 80 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~-~~~~~~~~l~~~~~~~~~~~-- 80 (190)
-|+++|.++.+++.++++.++++++++++.... ...++..+.++... .+...+++++..........
T Consensus 105 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (538)
T TIGR03208 105 LNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPERDDTPDAA 184 (538)
T ss_pred EeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhccccccccccc
Confidence 456799999999999999999999999875321 12233344444432 22334555543221111000
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
.........++++++++|||||||.||||+++|+++...+......+++.. +|++++.+|++|..|+.+.++.++..|+
T Consensus 185 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~~~~~~~~l~~g~ 263 (538)
T TIGR03208 185 AILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGG-GDVILMASPMAHQTGFMYGLMMPLILNA 263 (538)
T ss_pred cccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCC-CCeEEEeCCchhHHHHHHHHHHHHHcCC
Confidence 001112356789999999999999999999999999988877777778877 9999999999999998888899999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
++++. +.+++..+++.++++++|++.+
T Consensus 264 ~~~~~-~~~~~~~~~~~l~~~~vt~~~~ 290 (538)
T TIGR03208 264 TAVLQ-DIWNPARAAELIRETGVTFTMA 290 (538)
T ss_pred EEEec-CccCHHHHHHHHHHhCCeEEec
Confidence 99998 6899999999999999999864
No 29
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.87 E-value=1.6e-21 Score=163.74 Aligned_cols=164 Identities=20% Similarity=0.256 Sum_probs=125.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC---CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCC
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK---ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNC 90 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 90 (190)
.|+++|.++.+++.++++++++++++++..... ....+..+.+ .+. ...+.+++....... +.....+
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~~~~------~~~~~~~ 149 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVL-DVD--TPAYAELVAAAGALT------PHREVDA 149 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEE-Ecc--chhhhhhhccccCcC------CCCCCCC
Confidence 345699999999999999999999999876332 1112233322 221 123444443221111 0123567
Q ss_pred CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC
Q psy13808 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK 170 (190)
Q Consensus 91 ~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~ 170 (190)
+++++++|||||||.||||+++|+++..........+++.+ +|+++..+|++|..++...++.++..|+++++. +.++
T Consensus 150 ~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~-~~~~ 227 (540)
T PRK13388 150 MDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTR-DDVCYVSMPLFHSNAVMAGWAPAVASGAAVALP-AKFS 227 (540)
T ss_pred CCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCC-CCEEEEeeCchhhcchHHHHHHHHHcCcEEEEC-CCCC
Confidence 99999999999999999999999999988777777788887 999999999999998776666789999999988 6799
Q ss_pred hHHHHHHHHHCCceEEec
Q psy13808 171 PMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~ 188 (190)
+..+++.++++++|++..
T Consensus 228 ~~~~~~~i~~~~vt~~~~ 245 (540)
T PRK13388 228 ASGFLDDVRRYGATYFNY 245 (540)
T ss_pred HHHHHHHHHHhCCeEEEe
Confidence 999999999999999864
No 30
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.87 E-value=1.7e-21 Score=166.96 Aligned_cols=165 Identities=13% Similarity=0.017 Sum_probs=120.5
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC------CCCCCCCcEEEEeecC--------------cccHHHHHhcCCC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK------ADALPTKLTRLALRMG--------------TFRLSDIMQGAGP 75 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~i~~~~~--------------~~~~~~l~~~~~~ 75 (190)
|+++.++++++.++++.++++++|++..... ....+.++.++.+... ..+|++++..+..
T Consensus 130 pl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (660)
T PLN02430 130 PLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKE 209 (660)
T ss_pred EeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhcc
Confidence 4499999999999999999999999875211 1123445556554210 1345555543321
Q ss_pred cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh-----cCCcCCCcEEEEeCCchhHHHHHH
Q psy13808 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR-----LEFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~-----~~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
... ......++|+++|+|||||||.||||++||+++..+....... .++.+ +|++++.+|++|.++..+
T Consensus 210 ~~~-----~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~-~d~~ls~lPl~H~~~~~~ 283 (660)
T PLN02430 210 NPS-----ETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH-DDVYLSFLPLAHILDRMI 283 (660)
T ss_pred CCC-----CCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC-CCEEEEeCcHHHHHHHHH
Confidence 110 0123468999999999999999999999999998876554322 14555 899999999999999766
Q ss_pred HHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
. +..+..|+++++.. .++..+++.|+++++|++.++
T Consensus 284 ~-~~~l~~G~~i~~~~--~~~~~l~~~l~~~~pt~~~~v 319 (660)
T PLN02430 284 E-EYFFRKGASVGYYH--GDLNALRDDLMELKPTLLAGV 319 (660)
T ss_pred H-HHHHHcCCEEEEeC--CChhhHHHHHHHhCCcEEEec
Confidence 4 55788999998873 378899999999999998763
No 31
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.87 E-value=7.5e-22 Score=170.68 Aligned_cols=170 Identities=16% Similarity=0.191 Sum_probs=122.7
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC---CC----CCCcEEEEeec--CcccHHHH--HhcCCCcchhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD---AL----PTKLTRLALRM--GTFRLSDI--MQGAGPEYHRRRE 82 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~---~~----~~~~~~i~~~~--~~~~~~~l--~~~~~~~~~~~~~ 82 (190)
.|++|+.+++++++++++++++++++++.+..... .. +.... +.+.. +...+.+. ........ .
T Consensus 282 ~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~----~ 356 (718)
T PRK08043 282 PAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRW-VYLEDLKDDVTTADKLWIFAHLLMP----R 356 (718)
T ss_pred ccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccE-EEhhhhhhhcchhHHHHHHHHHhCC----c
Confidence 34559999999999999999999999987633211 11 11122 22110 00111110 00000000 0
Q ss_pred hhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 83 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
.......++|+++++|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+|+...++.++..|+++
T Consensus 357 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~v 435 (718)
T PRK08043 357 LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTP-NDRFMSALPLFHSFGLTVGLFTPLLTGAEV 435 (718)
T ss_pred cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCc-cCeEEEcCcchhhhhhHHHHHHHHHcCCEE
Confidence 0012346789999999999999999999999999988777777778887 999999999999999877788999999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++.+..+++..+++.++++++|+++++
T Consensus 436 v~~~~~~~~~~~~~~i~~~~vt~~~~~ 462 (718)
T PRK08043 436 FLYPSPLHYRIVPELVYDRNCTVLFGT 462 (718)
T ss_pred EEeCCcccHHHHHHHHHhcCCeEEEch
Confidence 998545788899999999999998753
No 32
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.87 E-value=4.3e-21 Score=161.22 Aligned_cols=173 Identities=27% Similarity=0.423 Sum_probs=128.4
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC-----------------------CCCCCCCcEEEEe----ecCcccHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK-----------------------ADALPTKLTRLAL----RMGTFRLSD 68 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----------------------~~~~~~~~~~i~~----~~~~~~~~~ 68 (190)
+++|.++.+++.+++++++++++++++.... ...++....++.. ..+...|++
T Consensus 99 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (558)
T PRK12583 99 NINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLAWHE 178 (558)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccccchHh
Confidence 5689999999999999999999998764211 1112222333332 112234444
Q ss_pred HHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHH
Q psy13808 69 IMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGT 148 (190)
Q Consensus 69 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 148 (190)
+....................++++++++|||||||.||||+++|+++..++......+++.+ +|++++..|++|.+|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g~ 257 (558)
T PRK12583 179 LQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE-HDRLCVPVPLYHCFGM 257 (558)
T ss_pred hhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC-CCeEEEecCchhhhhH
Confidence 443322111111111123346789999999999999999999999999988877777788887 9999999999999998
Q ss_pred HHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 149 AMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 149 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.++.++..|+++++....+++..+++.++++++|+++++
T Consensus 258 ~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~ 298 (558)
T PRK12583 258 VLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGV 298 (558)
T ss_pred HHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEecc
Confidence 88899999999999987567899999999999999998764
No 33
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.87 E-value=2.1e-21 Score=163.60 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=120.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEee---------cCcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALR---------MGTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
++++|.++.+++.++++.+++++++++.+........... ++.+. .....+.+++....... ..
T Consensus 120 v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 192 (560)
T PLN02574 120 TTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVP-VIGVPENYDFDSKRIEFPKFYELIKEDFDFV------PK 192 (560)
T ss_pred eCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCc-EEecCcccccccCccCcccHHHHhhcCCccc------cc
Confidence 4458999999999999999999999987632211000111 11110 11233444443322111 12
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
....++++++|+|||||||.||||+++|+++..+...... .+.....+++++..+|++|.+|+...++.++..|++
T Consensus 193 ~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 272 (560)
T PLN02574 193 PVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGST 272 (560)
T ss_pred CCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCE
Confidence 3346789999999999999999999999999877654432 222322278899999999999987777888899999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++. +.++++.+++.|++|++|++.++
T Consensus 273 ~v~~-~~~~~~~~~~~i~~~~~t~~~~~ 299 (560)
T PLN02574 273 IVVM-RRFDASDMVKVIDRFKVTHFPVV 299 (560)
T ss_pred EEEe-cCCCHHHHHHHHHHcCCeEEecC
Confidence 9998 68999999999999999998763
No 34
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.87 E-value=3.4e-21 Score=164.85 Aligned_cols=171 Identities=17% Similarity=0.096 Sum_probs=115.3
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCC-------------CCC--CCcEEEEe-ec------------------
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKAD-------------ALP--TKLTRLAL-RM------------------ 61 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~-------------~~~--~~~~~i~~-~~------------------ 61 (190)
++++.+++++|.++|++++|+++|++....... ... ....++.. ..
T Consensus 146 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 225 (647)
T PTZ00237 146 VLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIP 225 (647)
T ss_pred eeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCc
Confidence 449999999999999999999999976311100 011 12233332 10
Q ss_pred CcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHH-HHHHHHHhhhhcCCcCCCcEEEEeC
Q psy13808 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYN-LINNSNFIGKRLEFDKTDHKILLQV 140 (190)
Q Consensus 62 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (190)
+...|++++.......... .......+++|+++|+|||||||+||||+++|++ +.+............. ++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~-~d~~~~~~ 303 (647)
T PTZ00237 226 NTLSWYDEIKKIKENNQSP-FYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDI-PTVVFSHS 303 (647)
T ss_pred ccccHHHHHhhhccccCCC-CCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCC-CcEEEEcC
Confidence 1123444443211000000 0112345789999999999999999999999998 4443333334445555 89999999
Q ss_pred CchhHHHHHHHHHHHHHhCCEEEEcCCC-CC----hHHHHHHHHHCCceEEecc
Q psy13808 141 PMFHTFGTAMGILNAMNHGSTTVVPAPS-FK----PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 141 pl~h~~g~~~~~~~~l~~G~~vv~~~~~-~~----~~~~~~~i~~~~iT~l~~t 189 (190)
|++|..+. ..++.+|..|+++++++.. +. ++.+++.|+++++|+++++
T Consensus 304 ~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~ 356 (647)
T PTZ00237 304 SIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTL 356 (647)
T ss_pred CCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeC
Confidence 99998764 4578999999999998532 22 7899999999999998764
No 35
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.87 E-value=3.5e-21 Score=161.48 Aligned_cols=166 Identities=17% Similarity=0.176 Sum_probs=125.9
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC-CC---CCCcEEEEee----------------------------cC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD-AL---PTKLTRLALR----------------------------MG 62 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~-~~---~~~~~~i~~~----------------------------~~ 62 (190)
++++|.++.+++.++++.+++++++++.+..... .. ...+.++... .+
T Consensus 89 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (546)
T PRK08314 89 VPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAPGG 168 (546)
T ss_pred eecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccccc
Confidence 4569999999999999999999999987632210 00 0122222210 01
Q ss_pred cccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCc
Q psy13808 63 TFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM 142 (190)
Q Consensus 63 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 142 (190)
...|++.+..... .......++++++|+|||||||.||+|+++|++++..+......+++.. +|++++.+|+
T Consensus 169 ~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~l~~~p~ 240 (546)
T PRK08314 169 VVAWKEALAAGLA-------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTP-ESVVLAVLPL 240 (546)
T ss_pred cccHHHHhcccCC-------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCC-CceEEEEcCc
Confidence 1223333322110 0123356789999999999999999999999999988887777778877 9999999999
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+|.+|+.+.++.++..|+++++. +.+++..+++.++++++|++.++
T Consensus 241 ~~~~g~~~~~~~~l~~G~~i~~~-~~~~~~~~~~~i~~~~~t~~~~~ 286 (546)
T PRK08314 241 FHVTGMVHSMNAPIYAGATVVLM-PRWDREAAARLIERYRVTHWTNI 286 (546)
T ss_pred hHHHHHHHHHHHHHHcCCeEEec-CCCCHHHHHHHHHHhcCceeccc
Confidence 99999888888999999999999 67899999999999999998753
No 36
>PTZ00297 pantothenate kinase; Provisional
Probab=99.87 E-value=2.5e-21 Score=174.67 Aligned_cols=173 Identities=12% Similarity=0.018 Sum_probs=127.7
Q ss_pred CCCcccccccCCCCC-----------------------CccchhhhhhccCCCCCCCCCCCCC---CCCCCCCcEEEEee
Q psy13808 7 NRGEKEDRIGESQPF-----------------------RERTLSHQDKIRPGRESNPRPSAYK---ADALPTKLTRLALR 60 (190)
Q Consensus 7 ~~~~~~~~v~i~p~~-----------------------~~~~l~~~l~~~~~~~i~~~~~~~~---~~~~~~~~~~i~~~ 60 (190)
.|-++||||+|--.. +.+++.+++++++++++|++.+.+. ....+.++.+|+++
T Consensus 477 lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly~t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d 556 (1452)
T PTZ00297 477 LGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLVGKGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTH 556 (1452)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEEC
Confidence 467788888882222 5689999999999999999876322 11123577777762
Q ss_pred c----C-----------cccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEe---cCCCCCCCceeEechHHHHHHHHH
Q psy13808 61 M----G-----------TFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQF---TSGTTGHPKAAFLTHYNLINNSNF 122 (190)
Q Consensus 61 ~----~-----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---TSGTTG~PKgv~~sh~~~~~~~~~ 122 (190)
. + ..+|++++..+..... ......+++|++.|+| ||||||.||||++||+|++.++..
T Consensus 557 ~~~~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~----~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~ 632 (1452)
T PTZ00297 557 SFYDEDDHAVARDLNITLIPYEFVEQKGRLCPV----PLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDIST 632 (1452)
T ss_pred CCcccccccccccCCcceeeHHHHHhcCcccCc----cccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHH
Confidence 1 0 2457777775532111 1123347889999996 999999999999999999998876
Q ss_pred hhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 123 IGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 123 ~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..... ...+ +|++++++|++|+++..+ .+.++..|++++. ++++.+++.|+++|+|++++.
T Consensus 633 ~~~~~~~~~~~~-~D~~Ls~LPLaHI~er~~-~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~V 696 (1452)
T PTZ00297 633 LVMTGVLPSSFK-KHLMVHFTPFAMLFNRVF-VLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAA 696 (1452)
T ss_pred HhhhccccCCCC-CCEEEEechHHHHHHHHH-HHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEec
Confidence 55432 3344 899999999999999554 6777899999864 478999999999999999864
No 37
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.87 E-value=6.7e-21 Score=159.93 Aligned_cols=165 Identities=21% Similarity=0.281 Sum_probs=126.3
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEeec-----CcccHHHHHhcCCCcchhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALRM-----GTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~~~~~~~ 80 (190)
+++|.++.+++.++++.+++++++++..... ...++..+.++.... ....+.+++.......
T Consensus 103 ~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 179 (547)
T PRK06087 103 PLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEPLT--- 179 (547)
T ss_pred ccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCccc---
Confidence 4588999999999999999999999764211 122334444444311 1223444443321111
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
......++++++|+|||||||.||+|+++|+++..........+++.+ ++++++..|++|.+|+...++.++..|+
T Consensus 180 ---~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~~~~~~~~l~~g~ 255 (547)
T PRK06087 180 ---TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTW-QDVFMMPAPLGHATGFLHGVTAPFLIGA 255 (547)
T ss_pred ---CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCC-CCeEEEecchHHHHHHHHHHHHHHhcCC
Confidence 112356789999999999999999999999999887777666777877 9999999999999998778889999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
++++. +.++++.+++.++++++|++.+
T Consensus 256 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 282 (547)
T PRK06087 256 RSVLL-DIFTPDACLALLEQQRCTCMLG 282 (547)
T ss_pred EEEec-CCCCHHHHHHHHHHcCCCEEec
Confidence 99998 7899999999999999998864
No 38
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.86 E-value=2e-21 Score=167.48 Aligned_cols=168 Identities=16% Similarity=0.101 Sum_probs=119.0
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeecC---------------cccHHHHHhcCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRMG---------------TFRLSDIMQGAG 74 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~~---------------~~~~~~l~~~~~ 74 (190)
|++++.++++++.++|++++++++|++.+.+. ...++.++.++.+++. ..+|.++...+.
T Consensus 159 vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (696)
T PLN02387 159 VTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGK 238 (696)
T ss_pred EEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhc
Confidence 34599999999999999999999999876322 2344566677665211 123455544322
Q ss_pred CcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc-CCcCCCcEEEEeCCchhHHHHHHHHH
Q psy13808 75 PEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL-EFDKTDHKILLQVPMFHTFGTAMGIL 153 (190)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~ 153 (190)
.... ......++|+++|+|||||||.||||++||+++..........+ ++.+ +|++++.+|++|.+++... .
T Consensus 239 ~~~~-----~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~-~d~~l~~lPl~Hi~~~~~~-~ 311 (696)
T PLN02387 239 ENPV-----DPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK-NDVYLAYLPLAHILELAAE-S 311 (696)
T ss_pred cCCC-----CCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC-CCEEEEECcHHHHHHHHHH-H
Confidence 1110 01234689999999999999999999999999998776655443 5666 8999999999999997663 4
Q ss_pred HHHHhCCEEEEcCC-----CCC--hHHHHHHHHHCCceEEecc
Q psy13808 154 NAMNHGSTTVVPAP-----SFK--PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 154 ~~l~~G~~vv~~~~-----~~~--~~~~~~~i~~~~iT~l~~t 189 (190)
..+..|+++.+... .++ +..+++.++++++|++.++
T Consensus 312 ~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~v 354 (696)
T PLN02387 312 VMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAV 354 (696)
T ss_pred HHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEeh
Confidence 45777888776421 111 2346778999999998763
No 39
>PRK08315 AMP-binding domain protein; Validated
Probab=99.86 E-value=1e-20 Score=159.12 Aligned_cols=174 Identities=28% Similarity=0.475 Sum_probs=130.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----------------------CCCCCCcEEEEee----cCcccHH
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----------------------DALPTKLTRLALR----MGTFRLS 67 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----------------------~~~~~~~~~i~~~----~~~~~~~ 67 (190)
|+++|.++.+++.++++.+++++++++...... ...+..+.++... .+...++
T Consensus 96 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (559)
T PRK08315 96 VTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPGMLNFD 175 (559)
T ss_pred EecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcccccHH
Confidence 456899999999999999999999998753211 1112233333321 1224455
Q ss_pred HHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHH
Q psy13808 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFG 147 (190)
Q Consensus 68 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 147 (190)
++....................++++++++|||||||.||+|.++|+++..+.......+++.+ +|+++...|++|..|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g 254 (559)
T PRK08315 176 ELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE-EDRLCIPVPLYHCFG 254 (559)
T ss_pred HHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC-CceEEEecCcHHHHH
Confidence 5544321111111111123356788999999999999999999999999988888888888887 999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 148 TAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 148 ~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+.++.++..|+++++....+++..+++.++++++|+++++
T Consensus 255 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~ 296 (559)
T PRK08315 255 MVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGV 296 (559)
T ss_pred HHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecc
Confidence 888889999999999966578999999999999999998753
No 40
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.86 E-value=1.3e-20 Score=156.88 Aligned_cols=165 Identities=19% Similarity=0.225 Sum_probs=126.4
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec---------CcccHHHHHhcCCCcchhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM---------GTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~---------~~~~~~~l~~~~~~~~~~~ 80 (190)
+++++.++.+++.++++++++++++++..... ....+....++.+.. ....|+++.......
T Consensus 78 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 153 (515)
T TIGR03098 78 VPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGDAD---- 153 (515)
T ss_pred EeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccccc----
Confidence 35689999999999999999999999876332 112233334444311 123455544322111
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
.......+++++++|||||||.||+|+++|+++..++......+++.. +|++++.+|++|.+++. .++.++..|+
T Consensus 154 ---~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~-~~~~~l~~G~ 228 (515)
T TIGR03098 154 ---PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRP-DDRLLAVLPLSFDYGFN-QLTTAFYVGA 228 (515)
T ss_pred ---ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCc-ccEEEEECchhhHhHHH-HHHHHHHcCC
Confidence 112345678999999999999999999999999988877777777776 89999999999999865 5789999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. +.++++.+++.++++++|++.++
T Consensus 229 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 256 (515)
T TIGR03098 229 TVVLH-DYLLPRDVLKALEKHGITGLAAV 256 (515)
T ss_pred EEEEc-CCCCHHHHHHHHHHcCCceEecC
Confidence 99998 67999999999999999998864
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.86 E-value=1e-20 Score=161.42 Aligned_cols=168 Identities=11% Similarity=-0.002 Sum_probs=121.1
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC--------------CCC-CCCcEEEEeec----------CcccHHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA--------------DAL-PTKLTRLALRM----------GTFRLSDIM 70 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------------~~~-~~~~~~i~~~~----------~~~~~~~l~ 70 (190)
+++|.++++++.+++++++|+++|+++..... ... +....++++.. ....+.++.
T Consensus 138 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 217 (629)
T PRK10524 138 VVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYATLR 217 (629)
T ss_pred eeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcccHHHHH
Confidence 44899999999999999999999997652210 000 22334444321 112344443
Q ss_pred hcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHH-HHhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 71 QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS-NFIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~-~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
....... .......++++++|+|||||||.||||+++|.+++... ......+++.+ +|++++..|++|..+..
T Consensus 218 ~~~~~~~-----~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~ 291 (629)
T PRK10524 218 AQHLGAR-----VPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKA-GETFFCASDIGWVVGHS 291 (629)
T ss_pred hcCCCCC-----CCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCC-CCEEEEcCCCCeeccch
Confidence 3211110 01123467899999999999999999999999976543 33444567777 89999999999998877
Q ss_pred HHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++.++..|+++++.+. .+++..+++.|+++++|++.++
T Consensus 292 ~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~ 334 (629)
T PRK10524 292 YIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSA 334 (629)
T ss_pred HHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeC
Confidence 778999999999999843 4589999999999999999864
No 42
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.86 E-value=1e-20 Score=156.68 Aligned_cols=161 Identities=14% Similarity=0.187 Sum_probs=120.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
+++||.++++++.++++.++++.++++......... ....++... .+.+.+....... .......++++
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~a 146 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPD-EEGRVIEID----EWKRMIEKYLPTY------APIENVQNAPF 146 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhh-ccceEEEeh----hhhhhhhhccccc------cccccCCCCcE
Confidence 456899999999999999999999998763322111 111222211 1222222111110 01122356789
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDS 174 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~ 174 (190)
+|+|||||||.||||+++|+++..++......+++.. +|+++...|++|..+ ++.++.++..|+++++. +.+++..+
T Consensus 147 ~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~d~~~~~~~l~~~~~-l~~~~~~l~~g~~~~~~-~~~~~~~~ 223 (487)
T PRK07638 147 YMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKR-EDSVLIAGTLVHSLF-LYGAISTLYVGQTVHLM-RKFIPNQV 223 (487)
T ss_pred EEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCC-CCEEEEeecchHHHH-HHHHHHHHccCcEEEEc-CCCCHHHH
Confidence 9999999999999999999999888777777778887 999999999999987 45688899999999998 78999999
Q ss_pred HHHHHHCCceEEecc
Q psy13808 175 LRAIAKEKCMEYLTK 189 (190)
Q Consensus 175 ~~~i~~~~iT~l~~t 189 (190)
++.++++++|++.++
T Consensus 224 ~~~i~~~~~t~~~~~ 238 (487)
T PRK07638 224 LDKLETENISVMYTV 238 (487)
T ss_pred HHHHHHcCCeEEEeC
Confidence 999999999999864
No 43
>PLN02246 4-coumarate--CoA ligase
Probab=99.86 E-value=1e-20 Score=158.50 Aligned_cols=165 Identities=21% Similarity=0.283 Sum_probs=123.3
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC----CCCCCCcEEEEeec---CcccHHHHHhcCCCcchhhhhhhhccC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA----DALPTKLTRLALRM---GTFRLSDIMQGAGPEYHRRREQISKSL 88 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~~~~~~~~~i~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~ 88 (190)
++||.++.+++..++++.++++++++...... ...+.. .++.+.. +...+.++........ +....
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 176 (537)
T PLN02246 104 TANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGV-TVVTIDDPPEGCLHFSELTQADENEL------PEVEI 176 (537)
T ss_pred cCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCc-eEEEeCCCCCCceeHHHHhcCCCCCC------CCCCC
Confidence 56899999999999999999999998763321 001111 2333311 2233444443221110 12335
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++++++++|||||||.||||+++|+++..+...... .+++.+ +|++++.+|++|.+++...++.++..|+++++
T Consensus 177 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 255 (537)
T PLN02246 177 SPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHS-DDVILCVLPMFHIYSLNSVLLCGLRVGAAILI 255 (537)
T ss_pred CccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCC-CcEEEEeechHHHHHHHHHHHHHHhcCCEEEE
Confidence 6889999999999999999999999999877654432 456776 99999999999999987778889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
. +.++++.+++.|+++++|++.++
T Consensus 256 ~-~~~~~~~~~~~i~~~~~t~~~~~ 279 (537)
T PLN02246 256 M-PKFEIGALLELIQRHKVTIAPFV 279 (537)
T ss_pred e-CCCCHHHHHHHHHHhCceEEEcc
Confidence 9 67999999999999999998764
No 44
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.86 E-value=1.8e-20 Score=160.68 Aligned_cols=166 Identities=15% Similarity=0.095 Sum_probs=120.7
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC--------------CCCCCCCcEEEEeec-----------CcccHHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK--------------ADALPTKLTRLALRM-----------GTFRLSDIM 70 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~--------------~~~~~~~~~~i~~~~-----------~~~~~~~l~ 70 (190)
+++|.++++++.+++++++|+++++++.... ...++....++.+.. ....|++++
T Consensus 168 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 247 (655)
T PRK03584 168 SCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWEDFL 247 (655)
T ss_pred eeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHHHh
Confidence 4589999999999999999999999875221 112344444444311 123455555
Q ss_pred hcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHH-HHHhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 71 QGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINN-SNFIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
....... .......++++++|+|||||||.||||+++|++++.+ .......+++.+ +|++++..++.|..+ .
T Consensus 248 ~~~~~~~-----~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~-~ 320 (655)
T PRK03584 248 APAEAAE-----LEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGP-GDRFFWYTTCGWMMW-N 320 (655)
T ss_pred hccccCC-----CCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCC-CCEEEEcCCchHHhH-H
Confidence 4211111 0123456799999999999999999999999987643 445556677877 899999999998765 2
Q ss_pred HHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+ ++.+|..|+++++.++ .+++..+++.++++++|++.++
T Consensus 321 ~-~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 362 (655)
T PRK03584 321 W-LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTS 362 (655)
T ss_pred H-HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcC
Confidence 3 6789999999999843 3589999999999999998753
No 45
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.86 E-value=1.5e-20 Score=156.78 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=125.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC------CCCCCCcEEEEee------cCcccHHHHHhcCCCcchhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA------DALPTKLTRLALR------MGTFRLSDIMQGAGPEYHRRR 81 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~------~~~~~~~~~i~~~------~~~~~~~~l~~~~~~~~~~~~ 81 (190)
-++++|.++.+++.++++++++++++++++.... ......+.++... .+...++++.........
T Consensus 89 ~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 165 (517)
T PRK08008 89 MVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATLC--- 165 (517)
T ss_pred EEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCcccc---
Confidence 4566999999999999999999999998873321 1112233444331 122334444332211100
Q ss_pred hhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 82 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
......++++++|+|||||||.||||+++|+++............+.. ++++++.+|++|..+....++.++..|++
T Consensus 166 --~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 242 (517)
T PRK08008 166 --YAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRD-DDVYLTVMPAFHIDCQCTAAMAAFSAGAT 242 (517)
T ss_pred --ccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCC-CCeEEEecCcHHHHHHHHHHHHHHhcCcE
Confidence 112346789999999999999999999999999866544444445666 89999999999998888888999999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++. ++++++.+++.++++++|++.++
T Consensus 243 ~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 269 (517)
T PRK08008 243 FVLL-EKYSARAFWGQVCKYRATITECI 269 (517)
T ss_pred EEEc-cccCHHHHHHHHHHcCCcEEech
Confidence 9998 68999999999999999998753
No 46
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.86 E-value=1.6e-20 Score=158.93 Aligned_cols=170 Identities=15% Similarity=0.147 Sum_probs=117.9
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCC-----CcEEEEeec---------CcccHHHHHhcCCCc
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPT-----KLTRLALRM---------GTFRLSDIMQGAGPE 76 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~-----~~~~i~~~~---------~~~~~~~l~~~~~~~ 76 (190)
++||.++.+++.++|+.+++++||++++.... ..++. ...++.++. ...++.+++......
T Consensus 93 pl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (579)
T PLN03102 93 PINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEPT 172 (579)
T ss_pred eccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCCC
Confidence 56999999999999999999999998763210 01111 112222211 123344544332211
Q ss_pred chhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHH
Q psy13808 77 YHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAM 156 (190)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l 156 (190)
... .........++++++|+|||||||.||||+++|+++..........+.+.. .++.+..+|++|..++.. .+.++
T Consensus 173 ~~~-~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~~~~l~~~pl~h~~g~~~-~~~~~ 249 (579)
T PLN03102 173 PSL-VARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGT-CPVYLWTLPMFHCNGWTF-TWGTA 249 (579)
T ss_pred Ccc-cccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCC-CCeEEecCChhhhcchhH-HHHHH
Confidence 100 000011235689999999999999999999999997655444444445555 788999999999998654 56788
Q ss_pred HhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 157 NHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 157 ~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..|+++++. +.+++..+++.|+++++|+++++
T Consensus 250 ~~g~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~ 281 (579)
T PLN03102 250 ARGGTSVCM-RHVTAPEIYKNIEMHNVTHMCCV 281 (579)
T ss_pred HhcCcEEee-ccCChHHHHHHHHHcCCeEEEeC
Confidence 899999988 67899999999999999999864
No 47
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.85 E-value=6.9e-21 Score=171.62 Aligned_cols=174 Identities=18% Similarity=0.261 Sum_probs=126.9
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-------CCCCCCcEEEEeec---Cc---ccHHHHHhcCCCcchhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-------DALPTKLTRLALRM---GT---FRLSDIMQGAGPEYHRRR 81 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-------~~~~~~~~~i~~~~---~~---~~~~~l~~~~~~~~~~~~ 81 (190)
|++||.++++++.++++++++++++++++.... ...+....++...+ .. ..+.+.............
T Consensus 693 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 (1146)
T PRK08633 693 VNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPARLLK 772 (1146)
T ss_pred EEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHHHHH
Confidence 455999999999999999999999998752211 01222333333211 00 112222111100000000
Q ss_pred hhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 82 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
........++|+++++|||||||.||||+++|+++..+.......+++.+ +|++++.+|++|.+|+...++.++..|++
T Consensus 773 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~g~~ 851 (1146)
T PRK08633 773 RLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRN-DDVILSSLPFFHSFGLTVTLWLPLLEGIK 851 (1146)
T ss_pred hhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCC-CCEEEEcCcHHHHHhHHHHHHHHHHCCCE
Confidence 00013456799999999999999999999999999988887777788887 99999999999999987778899999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.++.++++.+++.++++++|++.++
T Consensus 852 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~ 879 (1146)
T PRK08633 852 VVYHPDPTDALGIAKLVAKHRATILLGT 879 (1146)
T ss_pred EEEeCCCCCHHHHHHHHHHcCCeEEEec
Confidence 9998667899999999999999999864
No 48
>PRK12467 peptide synthase; Provisional
Probab=99.85 E-value=6.1e-21 Score=186.56 Aligned_cols=163 Identities=18% Similarity=0.152 Sum_probs=126.5
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
+..|+++|.++.+++.++++++++++++++...............+.++. ......... .+.....++
T Consensus 3170 a~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-----~~~~~~~~~ 3237 (3956)
T PRK12467 3170 GAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDR-------LDLNGYSEN-----NPSTRVMGE 3237 (3956)
T ss_pred cEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecc-------hhhcccCCC-----CCcccCCCC
Confidence 34567799999999999999999999999877433211111112222111 000011100 112345789
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--C
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--F 169 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~ 169 (190)
++++|+|||||||+||||+++|+++.+.+......+++.+ +|++++..|++|..+ ++.++.+|..|+++++.+ . +
T Consensus 3238 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~-~d~~l~~~~~~fd~~-~~~~~~~L~~G~~l~i~~-~~~~ 3314 (3956)
T PRK12467 3238 NLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDA-NDRVLLFMSFSFDGA-QERFLWTLICGGCLVVRD-NDLW 3314 (3956)
T ss_pred ceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCc-CCEEEEecCccHhHH-HHHHHHHHhCCCEEEECC-cccC
Confidence 9999999999999999999999999999988888889988 999999999999987 677899999999999985 4 7
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.+++.|+++++|++.++
T Consensus 3315 ~~~~l~~~i~~~~vt~~~~~ 3334 (3956)
T PRK12467 3315 DPEELWQAIHAHRISIACFP 3334 (3956)
T ss_pred CHHHHHHHHHHcCCEEEEcC
Confidence 99999999999999999865
No 49
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.85 E-value=2.1e-20 Score=157.99 Aligned_cols=169 Identities=17% Similarity=0.201 Sum_probs=125.1
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec--------------CcccHHHHHhcC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM--------------GTFRLSDIMQGA 73 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~--------------~~~~~~~l~~~~ 73 (190)
..+++||.++.+++.++++.+++++++++..... ....+..+.++.... ...+|.+++...
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 90 VFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 3456799999999999999999999999876222 122334444443311 122355555432
Q ss_pred CCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHh--hhhcCCcCCCcEEEEeCCchhHHHHHHH
Q psy13808 74 GPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI--GKRLEFDKTDHKILLQVPMFHTFGTAMG 151 (190)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~--~~~~~~~~~~~~~l~~~pl~h~~g~~~~ 151 (190)
.... ......++++++++|||||||.||||+++|+++....... ...+++.. ++++++.+|++|.+++..
T Consensus 170 ~~~~------~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~-~~~~l~~~pl~h~~g~~~- 241 (576)
T PRK05620 170 STVY------DWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTH-GESFLCCVPIYHVLSWGV- 241 (576)
T ss_pred CCcC------CCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCC-CCeEEEeCChHHhhhhHH-
Confidence 2111 1133567899999999999999999999999986544332 33466776 899999999999999654
Q ss_pred HHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 152 ILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 152 ~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.++..|+++++.+..+++..+++.++++++|.++++
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 279 (576)
T PRK05620 242 PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGV 279 (576)
T ss_pred HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeec
Confidence 67889999999998667899999999999999998764
No 50
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2.7e-20 Score=151.48 Aligned_cols=100 Identities=21% Similarity=0.329 Sum_probs=90.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
..++++++++|||||||.||||+++|+++.++.......+++.. +|+.+..+|++|.+|+...++.++..|+++++. +
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~-~ 175 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQ-DETPIVACPVTHSYGLICGVLAALTRGSKPVII-T 175 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCc-ccEEEEecCcHHHHHHHHHHHHHHHcCCEEEec-C
Confidence 35688999999999999999999999999988777777777776 899999999999999888899999999999998 6
Q ss_pred CCChHHHHHHHHHCCceEEecc
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++++.+++.++++++|+++++
T Consensus 176 ~~~~~~~~~~l~~~~~t~~~~~ 197 (414)
T PRK08308 176 NKNPKFALNILRNTPQHILYAV 197 (414)
T ss_pred CCCHHHHHHHHHHhCCeEEEcC
Confidence 7899999999999999998763
No 51
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.85 E-value=2.1e-20 Score=156.79 Aligned_cols=164 Identities=19% Similarity=0.193 Sum_probs=122.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEeec--CcccHHHHHhcCCCcchhhhhhhhcc
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALRM--GTFRLSDIMQGAGPEYHRRREQISKS 87 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~ 87 (190)
|++||.++.+++.++++.+++++++++...... ...+....++.... ....++++....... ...
T Consensus 121 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 192 (537)
T PRK13382 121 LLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHAGQ--------RPE 192 (537)
T ss_pred EecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccCcC--------CCC
Confidence 456999999999999999999999998762210 11222222232211 122344444322111 112
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
..+++.++++|||||||.||||+++|+++..........+.+.. +++++...|++|.+|+ ..++.++..|+++++. +
T Consensus 193 ~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~-~ 269 (537)
T PRK13382 193 PTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRA-EEPTVIVAPMFHAWGF-SQLVLAASLACTIVTR-R 269 (537)
T ss_pred CCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCC-CCeEEEecChHhhhHH-HHHHHHHhcCcEEEEC-C
Confidence 34678899999999999999999999988877766666667776 8999999999999986 4578889999999988 7
Q ss_pred CCChHHHHHHHHHCCceEEecc
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++++.+++.|+++++|++.++
T Consensus 270 ~~~~~~~~~~i~~~~vt~~~~~ 291 (537)
T PRK13382 270 RFDPEATLDLIDRHRATGLAVV 291 (537)
T ss_pred CcCHHHHHHHHHHhCCEEEEeh
Confidence 8999999999999999998764
No 52
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.85 E-value=3.4e-20 Score=154.11 Aligned_cols=167 Identities=22% Similarity=0.296 Sum_probs=131.0
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec--------CcccHHHHHhcCCCcchhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM--------GTFRLSDIMQGAGPEYHRRR 81 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~~~~~~~~ 81 (190)
|+++|.++.+++.++++++++++++++..... ...++..+.++.... ...+|.+++.......
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 158 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDPAE---- 158 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCCCC----
Confidence 45689999999999999999999999876322 122344444444311 1234566654332211
Q ss_pred hhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 82 EQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 82 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
......++++++++|||||||.||+|.++|+++..........+++.. ++++++..|++|.+++...++.++..|++
T Consensus 159 --~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 235 (513)
T PRK07656 159 --RAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTE-GDRYLAANPFFHVFGYKAGVNAPLMRGAT 235 (513)
T ss_pred --CcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCC-CCeEEEccchHHHHHHHHHHHHHHHcCce
Confidence 123457789999999999999999999999999988877777788887 99999999999999988778999999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++. +.++++.+++.++++++|++.++
T Consensus 236 ~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 262 (513)
T PRK07656 236 ILPL-PVFDPDEVFRLIETERITVLPGP 262 (513)
T ss_pred EEec-CcCCHHHHHHHHHHhCCeEEech
Confidence 9997 67899999999999999998764
No 53
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.84 E-value=3.1e-20 Score=153.88 Aligned_cols=161 Identities=21% Similarity=0.220 Sum_probs=121.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CC---CCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DA---LPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNC 90 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~---~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 90 (190)
+++++.++++++.++++.++++++++++..... .+ ......++.+ .++.++....... .....+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~ 148 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISI----TSLKEIEDRKIDN--------FVEKNE 148 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEe----cchHhhhccCCCC--------CCCCCC
Confidence 455899999999999999999999998763221 11 1111222222 1233333322111 123466
Q ss_pred CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC
Q psy13808 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK 170 (190)
Q Consensus 91 ~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~ 170 (190)
+++++|+|||||||.||+|+++|+++..........+++.+ +|++++.+|++|.+|+.+.++.++..|+++++. +.++
T Consensus 149 ~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~-~~~~ 226 (496)
T PRK06839 149 SASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTM-HDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVP-RKFE 226 (496)
T ss_pred CCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCC-CCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEc-cCCC
Confidence 89999999999999999999999998876665566677777 999999999999999877778899999999988 7899
Q ss_pred hHHHHHHHHHCCceEEecc
Q psy13808 171 PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~t 189 (190)
++.+++.++++++|++.++
T Consensus 227 ~~~~~~~i~~~~~t~~~~~ 245 (496)
T PRK06839 227 PTKALSMIEKHKVTVVMGV 245 (496)
T ss_pred HHHHHHHHHhhCCeEEEeh
Confidence 9999999999999998763
No 54
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.84 E-value=3.3e-20 Score=158.24 Aligned_cols=170 Identities=17% Similarity=0.110 Sum_probs=116.6
Q ss_pred cCCCCCCc-----cchhhhhhccCCCCCCCCCCCC-----CCCCCCCCcEEEEeec-----CcccHHHHHhcCCCcchhh
Q psy13808 16 GESQPFRE-----RTLSHQDKIRPGRESNPRPSAY-----KADALPTKLTRLALRM-----GTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 16 ~i~p~~~~-----~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~~~~~~~ 80 (190)
++||.++. +++.++++.+++++++++.... ........+ ++.... ....+.++........
T Consensus 134 pl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 209 (624)
T PRK12582 134 PVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVT-VVHVTGPGEGIASIAFADLAATPPTAA--- 209 (624)
T ss_pred eccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCce-EEEEcCCCcccccccHHHHhhcCCcch---
Confidence 45888775 8999999999999999986411 100001122 222211 1234555554321110
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcC--CCcEEEEeCCchhHHHHHHHHHHHHHh
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK--TDHKILLQVPMFHTFGTAMGILNAMNH 158 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~--~~~~~l~~~pl~h~~g~~~~~~~~l~~ 158 (190)
.........++++++|+|||||||.||||+++|+++..+............ ..++.++.+|++|.+|+...++.++..
T Consensus 210 ~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~ 289 (624)
T PRK12582 210 VAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWG 289 (624)
T ss_pred hhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhC
Confidence 111112356789999999999999999999999999887665544444332 158999999999999987777888999
Q ss_pred CCEEEEcCCCCCh---HHHHHHHHHCCceEEecc
Q psy13808 159 GSTTVVPAPSFKP---MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 159 G~~vv~~~~~~~~---~~~~~~i~~~~iT~l~~t 189 (190)
|+++++.+..+++ ..+++.++++++|+++++
T Consensus 290 G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~v 323 (624)
T PRK12582 290 GGTLYIDDGKPLPGMFEETIRNLREISPTVYGNV 323 (624)
T ss_pred ceEEEEcCCCcccchHHHHHHHHHhcCCeEEecc
Confidence 9999997545554 356778899999998764
No 55
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=1.1e-20 Score=170.35 Aligned_cols=171 Identities=18% Similarity=0.164 Sum_probs=125.1
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-------CCCCCCcEEEEeecC---cccHHHHHhcCCCcchhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-------DALPTKLTRLALRMG---TFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-------~~~~~~~~~i~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
+++||.++++++.++++++++++++++++.... .+++....++..++. ...++++....... .+.. .
T Consensus 710 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~--~ 786 (1140)
T PRK06814 710 AMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGR-FPLV--Y 786 (1140)
T ss_pred EEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhcc-CCcc--c
Confidence 346999999999999999999999998752221 112222333332110 01111111100000 0000 0
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.+..+++|+++++|||||||.||||+++|+++.++.......+++.+ +|++++.+|++|.+++...++.++..|+++++
T Consensus 787 ~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 787 FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSP-EDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCC-cCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 11357899999999999999999999999999988887778888887 99999999999999987788999999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.++...+.+.++++++|++.++
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~ 890 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGT 890 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEec
Confidence 8556788889999999999998864
No 56
>PRK12467 peptide synthase; Provisional
Probab=99.84 E-value=2.3e-20 Score=182.66 Aligned_cols=166 Identities=18% Similarity=0.216 Sum_probs=127.1
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
+..||++|.++.+++.++++++++++++++.........+.....+.+... .+........ .+.....++
T Consensus 587 ~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~ 656 (3956)
T PRK12467 587 GAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPVPAGLRSLCLDEP----ADLLCGYSGH------NPEVALDPD 656 (3956)
T ss_pred cEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhcccccCccEEEeccc----cccccccCCC------CCCCCCCCC
Confidence 445677999999999999999999999999863322211111222221110 1111111110 012345789
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--CC
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP--SF 169 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~--~~ 169 (190)
++++|+|||||||+||||+++|+++.+.+......+++.+ +|+++...|++|..+ .+.++.+|..|+++++.++ .+
T Consensus 657 ~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~~~~fd~~-~~~~~~~L~~G~~lv~~~~~~~~ 734 (3956)
T PRK12467 657 NLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAA-DDSMLMVSTFAFDLG-VTELFGALASGATLHLLPPDCAR 734 (3956)
T ss_pred CeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCC-CCEEEEecCccHhHH-HHHHHHHHhCCCEEEEcCccccC
Confidence 9999999999999999999999999999888888888887 999999999999988 5678999999999999854 37
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.+++.|+++++|++.++
T Consensus 735 ~~~~l~~~i~~~~vt~~~~~ 754 (3956)
T PRK12467 735 DAEAFAALMADQGVTVLKIV 754 (3956)
T ss_pred CHHHHHHHHHHcCCeEEEcC
Confidence 99999999999999999875
No 57
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.84 E-value=2.8e-20 Score=156.21 Aligned_cols=167 Identities=19% Similarity=0.158 Sum_probs=122.5
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEeecCc-----ccHHHHHhcCCCcchhhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALRMGT-----FRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~~~~-----~~~~~l~~~~~~~~~~~~~~ 83 (190)
-++++|.++.+++.++++++++++++++.+.... ........++.+.... ..+..... .... . ..
T Consensus 98 ~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~--~~ 172 (542)
T PRK06155 98 AVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPL--PPLD-A--PA 172 (542)
T ss_pred EEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhh--cccC-C--CC
Confidence 3456999999999999999999999998763221 1112233344332110 01110000 0000 0 00
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
......++++++|+|||||||.||||+++|+++..........+++.+ ++++++..|++|..++.. ++.++..|++++
T Consensus 173 ~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~-~~~~l~~~pl~~~~~~~~-~~~~l~~G~~~~ 250 (542)
T PRK06155 173 PAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGA-DDVLYTTLPLFHTNALNA-FFQALLAGATYV 250 (542)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCC-CCEEEEecCHHHHHHHHH-HHHHHHcCceEE
Confidence 122346789999999999999999999999999887776777778887 999999999999998654 689999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEec
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
+. +.++++.+++.|+++++|++++
T Consensus 251 ~~-~~~~~~~~~~~l~~~~~t~~~~ 274 (542)
T PRK06155 251 LE-PRFSASGFWPAVRRHGATVTYL 274 (542)
T ss_pred ee-CCCCHHHHHHHHHHhCCcEEEc
Confidence 98 6899999999999999999875
No 58
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.84 E-value=7.3e-20 Score=153.09 Aligned_cols=166 Identities=16% Similarity=0.110 Sum_probs=122.7
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEeecC--cccHHHHHhcCCCcchhhhhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALRMG--TFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~~~~~~~~~ 83 (190)
+++|.++.+++.++++.+++++++++..... ....+..+.++..... .......+...... .
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 175 (527)
T TIGR02275 102 LALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESPAEP------V 175 (527)
T ss_pred ccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCcCcc------c
Confidence 4478889999999999999999999865211 0112333333332110 11122222211111 0
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTT 162 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~v 162 (190)
......++++++++|||||||.||||+++|+++...+......+.+.+ +|++++.+|++|.+++.. .++.++..|+++
T Consensus 176 ~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~ 254 (527)
T TIGR02275 176 KFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQ-QTRYLCALPAAHNYPLSSPGALGVFYAGGCV 254 (527)
T ss_pred cCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCc-CCEEEECCChHhhhhhhHHHHHHHHhcCCeE
Confidence 113457789999999999999999999999999988877777778887 999999999999998654 478889999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.+++..+++.++++++|++.++
T Consensus 255 v~~-~~~~~~~~~~~i~~~~~t~~~~~ 280 (527)
T TIGR02275 255 VLA-PDPSPTDCFPLIERHKVTVTALV 280 (527)
T ss_pred EEC-CCCCHHHHHHHHHHhCCeEEEec
Confidence 997 67899999999999999998764
No 59
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.84 E-value=3.5e-20 Score=168.92 Aligned_cols=161 Identities=13% Similarity=0.124 Sum_probs=122.7
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
..|+++|.++.+++.++++++++++++++.+.... +.....+... .+........... .....+++
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~~~~~~ 599 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPR--FADVPDLTSL-----CYNAPLAPQGAAP-------LQLSQPHH 599 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhh--cccCCCceee-----ecccccccccCCC-------CCCCCCCC
Confidence 44667999999999999999999999998763321 1111111110 0111111000000 12236789
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--CCC
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP--SFK 170 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~--~~~ 170 (190)
+++|+|||||||.||||+++|+++.+.+.+....+++.+ +|++++..|++|..+ ++.++.+|..|+++++.++ ..+
T Consensus 600 ~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~-~d~~l~~~~~~fd~~-~~~~~~~l~~G~~l~~~~~~~~~~ 677 (1296)
T PRK10252 600 TAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTA-DDVVLQKTPCSFDVS-VWEFFWPFIAGAKLVMAEPEAHRD 677 (1296)
T ss_pred eEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC-CCEEEEeCCcchhhh-HHHHHHHHhCCCEEEECChhccCC
Confidence 999999999999999999999999999988888899988 999999999999987 5678999999999999743 468
Q ss_pred hHHHHHHHHHCCceEEecc
Q psy13808 171 PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~t 189 (190)
++.+++.++++++|++.++
T Consensus 678 ~~~~~~~i~~~~vt~~~~~ 696 (1296)
T PRK10252 678 PLAMQQFFAEYGVTTTHFV 696 (1296)
T ss_pred HHHHHHHHHHcCCeEEEeC
Confidence 9999999999999998764
No 60
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.84 E-value=4e-20 Score=152.84 Aligned_cols=159 Identities=18% Similarity=0.173 Sum_probs=120.8
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
..+++++.++.+++.+++++++++.++++........ ... ...++++........ .......+++
T Consensus 78 ~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~-----~~~~~~~~~~ 142 (483)
T PRK03640 78 VAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLI--PGI--------SVKFAELMNGPKEEA-----EIQEEFDLDE 142 (483)
T ss_pred EEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHh--hhc--------cccHHHHhhcccccC-----CCCCCCCCCC
Confidence 3456688999999999999999999988765222110 000 011444333221111 0112346789
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChH
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~ 172 (190)
+++++|||||||.||+|+++|+++..........+++.+ +|++++.+|++|.+++.. ++.++..|+++++. +.+++.
T Consensus 143 ~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~-~~~~~~ 219 (483)
T PRK03640 143 VATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTE-DDCWLAAVPIFHISGLSI-LMRSVIYGMRVVLV-EKFDAE 219 (483)
T ss_pred eEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCc-CcEEEEecCHHHHHHHHH-HHHHHhcCCEEEec-CCCCHH
Confidence 999999999999999999999998887766666678887 999999999999999655 78889999999998 679999
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.+++.++++++|++.++
T Consensus 220 ~~~~~i~~~~~t~l~~~ 236 (483)
T PRK03640 220 KINKLLQTGGVTIISVV 236 (483)
T ss_pred HHHHHHHHhCCcEEEeH
Confidence 99999999999998763
No 61
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.84 E-value=8.2e-20 Score=153.10 Aligned_cols=170 Identities=19% Similarity=0.256 Sum_probs=123.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----------CCCCCCCcEEEEeecCcc--------cHHHHHhcCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----------ADALPTKLTRLALRMGTF--------RLSDIMQGAGP 75 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----------~~~~~~~~~~i~~~~~~~--------~~~~l~~~~~~ 75 (190)
++++|..+.+++.++++.+++++++++++... ....+..+.++....... .+..+......
T Consensus 88 v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (540)
T PRK06164 88 IAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFALPDP 167 (540)
T ss_pred EecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccccccccc
Confidence 46699999999999999999999999876311 011223333333211000 00000000000
Q ss_pred cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHH
Q psy13808 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 155 (190)
.. .. ........++++++++|||||||.||+|+++|+++..+.......+++.. ++++++.+|++|.+|+. .++.+
T Consensus 168 ~~-~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~g~~-~~~~~ 243 (540)
T PRK06164 168 AP-PA-AAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDP-GAVLLAALPFCGVFGFS-TLLGA 243 (540)
T ss_pred CC-cc-cccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCC-CCEEEEcCCchhHHHHH-HHHHH
Confidence 00 00 00012235688999999999999999999999999998888888888887 99999999999999964 58999
Q ss_pred HHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 156 l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+..|+++++. +.+++..+++.|+++++|+++++
T Consensus 244 l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~ 276 (540)
T PRK06164 244 LAGGAPLVCE-PVFDAARTARALRRHRVTHTFGN 276 (540)
T ss_pred HhcCceEEec-CCCCHHHHHHHHHHhCCeeecCC
Confidence 9999999998 68999999999999999998763
No 62
>PRK12316 peptide synthase; Provisional
Probab=99.84 E-value=3.4e-20 Score=183.92 Aligned_cols=166 Identities=17% Similarity=0.169 Sum_probs=126.9
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
+..|+++|.++.+++.++++++++++++++..............++..+.. ...+...... .......++
T Consensus 586 ~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~ 655 (5163)
T PRK12316 586 GAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRP----AAWLEGYSEE------NPGTELNPE 655 (5163)
T ss_pred CEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCc----chhhccCCCC------CCCCCCCCC
Confidence 345667999999999999999999999998763322211111122222110 1111111111 012345789
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--CC
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP--SF 169 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~--~~ 169 (190)
++++|+|||||||+||||+++|+++.+.+......+++.+ +|++++..|++|..+ ++.++.+|..|+++++.++ .+
T Consensus 656 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~fd~~-~~~~~~~L~~G~~l~i~~~~~~~ 733 (5163)
T PRK12316 656 NLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGV-GDTVLQKTPFSFDVS-VWEFFWPLMSGARLVVAAPGDHR 733 (5163)
T ss_pred CeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCC-CCEEEeeCCeehHHH-HHHHHHHHhCCCEEEECCccccC
Confidence 9999999999999999999999999999988888899987 999999999999998 5668999999999999853 47
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
++..+++.|++++||++.++
T Consensus 734 ~~~~~~~~i~~~~vt~~~~~ 753 (5163)
T PRK12316 734 DPAKLVELINREGVDTLHFV 753 (5163)
T ss_pred CHHHHHHHHHHcCCeEEEeC
Confidence 99999999999999999875
No 63
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.84 E-value=6.5e-20 Score=153.75 Aligned_cols=164 Identities=16% Similarity=0.136 Sum_probs=120.9
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEe-ecCcccHHHHHhcCCCcchhhhhhhhc
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLAL-RMGTFRLSDIMQGAGPEYHRRREQISK 86 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~ 86 (190)
++....+++.++++.++++.++++..... ....+..+.++.. ..+...+.+++....... ...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 177 (536)
T PRK10946 104 LFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAEDF------TAT 177 (536)
T ss_pred CccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCccccc------ccC
Confidence 33445677888999999999988764210 1112333333332 122334555544332111 112
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEEEEc
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTTVVP 165 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~vv~~ 165 (190)
...++++++++|||||||.||||+++|+++...+......+++.+ +|++++.+|++|.+++.. .++.++..|+++++.
T Consensus 178 ~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~-~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 178 PSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTP-QTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCC-CceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 346789999999999999999999999999998887777888887 899999999999988653 578889999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+++..+++.++++++|++.++
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~ 279 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALV 279 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeC
Confidence 67899999999999999998764
No 64
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.84 E-value=6.3e-20 Score=153.99 Aligned_cols=168 Identities=22% Similarity=0.245 Sum_probs=127.9
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee----cCcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR----MGTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~----~~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
|+++|..+.+++.++++.+++++++++..... ....+..+.++... .+..++++++........ .
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 168 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGPAHA------P 168 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCCCCC------C
Confidence 37799999999999999999999999876322 12224445455431 223556666543322110 1
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.....+++++++|||||||.||||+++|+++..........+++..+++++++..|++|.+|+ ..++.++..|+++++.
T Consensus 169 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~ 247 (542)
T PRK07786 169 VDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIY 247 (542)
T ss_pred CCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHHHHHccCEEEEc
Confidence 234567899999999999999999999999988877666666663338999999999999986 5588999999999986
Q ss_pred C-CCCChHHHHHHHHHCCceEEecc
Q psy13808 166 A-PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~-~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+ ..++++.+++.++++++|.++++
T Consensus 248 ~~~~~~~~~~~~~i~~~~~t~~~~~ 272 (542)
T PRK07786 248 PLGAFDPGQLLDVLEAEKVTGIFLV 272 (542)
T ss_pred cCCCcCHHHHHHHHHHcCCeEEEeh
Confidence 3 35799999999999999998764
No 65
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.84 E-value=9e-20 Score=151.81 Aligned_cols=169 Identities=15% Similarity=0.205 Sum_probs=127.8
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee---cCcccHHHHHhcCCCcchhhhhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~---~~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
.|+++|.++.+++.++++.+++++++++..... ....+....++... .....+.++........ ..
T Consensus 82 ~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 155 (508)
T TIGR02262 82 PVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATESEQF------KP 155 (508)
T ss_pred EeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCCCcc------CC
Confidence 457799999999999999999999999876321 12334455554431 11223444433222111 11
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHH-hhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNF-IGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~-~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
....++++++++|||||||.||||+++|+++...... ....+++.+ +|+++...|++|..++...++.++..|+++++
T Consensus 156 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~ 234 (508)
T TIGR02262 156 AATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIRE-DDVVFSAAKLFFAYGLGNALTFPMSVGATTVL 234 (508)
T ss_pred CCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCC-CCEEEEcCchHHHHHHHHHHHHHHHcCceEEE
Confidence 2345789999999999999999999999999876654 345567777 89999999999999977777888999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+++..+++.|+++++|+++++
T Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~ 259 (508)
T TIGR02262 235 MGERPTPDAVFDRLRRHQPTIFYGV 259 (508)
T ss_pred eCCCCCHHHHHHHHHHHCCcEEecc
Confidence 8767899999999999999998764
No 66
>PRK12316 peptide synthase; Provisional
Probab=99.83 E-value=5e-20 Score=182.73 Aligned_cols=164 Identities=13% Similarity=0.130 Sum_probs=124.7
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
..||++|.++.+++.++++++++++++++.........+.....+.+.. . ..+.. .... .+.....+++
T Consensus 2079 ~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~------~~~~~~~~~~ 2147 (5163)
T PRK12316 2079 AYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDR-D---AEWAD-YPDT------APAVQLAGEN 2147 (5163)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccc-h---hhhhc-cCcc------CCCCCCCCCC
Confidence 3456699999999999999999999999887433211111111111111 0 11111 1100 0123457899
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC-CCCh
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-SFKP 171 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-~~~~ 171 (190)
+++|+|||||||+||||+++|+++.+.+......+++.+ +|+++...|++|..+ ++.++.+|..|+++++.++ .+++
T Consensus 2148 ~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~-~d~~l~~~~~~fd~~-~~~~~~~L~~G~~~~~~~~~~~~~ 2225 (5163)
T PRK12316 2148 LAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSP-ADCELQFMSFSFDGA-HEQWFHPLLNGARVLIRDDELWDP 2225 (5163)
T ss_pred eEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCC-cceEEEecCchHHHH-HHHHHHHHhCCCEEEeCCcccCCH
Confidence 999999999999999999999999999988888889988 999999999999866 6779999999999988743 4799
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
+.+++.|+++++|++.++
T Consensus 2226 ~~~~~~i~~~~vt~~~~~ 2243 (5163)
T PRK12316 2226 EQLYDEMERHGVTILDFP 2243 (5163)
T ss_pred HHHHHHHHHcCCeEEEcC
Confidence 999999999999999875
No 67
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.83 E-value=1.1e-19 Score=152.54 Aligned_cols=170 Identities=18% Similarity=0.153 Sum_probs=122.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEee----cCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALR----MGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
.|++||.++.+++.++++.+++++++++.........-... ++.+. .....|.+++........ ........
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 182 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLP-VIVLGEEKIEGAVNWKELLEAADRAGD---TSDNEEIL 182 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCc-EEEecCCCCCCcccHHHHHhhccccCc---ccccccCC
Confidence 45779999999999999999999999998743321111112 22221 123446666543321110 00122345
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC--CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE--FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
++++++++|||||||.||||+++|+++..+........+ ... .++.+..+|++|.+|+...++.++..|+++++. .
T Consensus 183 ~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~-~ 260 (546)
T PLN02330 183 QTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIG-QVVTLGLIPFFHIYGITGICCATLRNKGKVVVM-S 260 (546)
T ss_pred cccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccC-ceEEEEecChHHHHHHHHHHHHHhhcCCEEEEe-c
Confidence 789999999999999999999999999876543221111 122 568999999999999776678889999999998 6
Q ss_pred CCChHHHHHHHHHCCceEEecc
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+++..+++.++++++|++.++
T Consensus 261 ~~~~~~~~~~i~~~~vt~~~~~ 282 (546)
T PLN02330 261 RFELRTFLNALITQEVSFAPIV 282 (546)
T ss_pred ccCHHHHHHHHHHcCCeeeecC
Confidence 8999999999999999998753
No 68
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=1.1e-19 Score=152.43 Aligned_cols=168 Identities=17% Similarity=0.179 Sum_probs=121.2
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee---------cCcccHHHHHhcCCCcchh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR---------MGTFRLSDIMQGAGPEYHR 79 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~---------~~~~~~~~l~~~~~~~~~~ 79 (190)
-|+++|.++++++.++++.+++++++++.+... ....+..+.++... .....++++........
T Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 168 (539)
T PRK07008 91 CHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQDGDY-- 168 (539)
T ss_pred EeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccCCCc--
Confidence 345689999999999999999999999876321 11223333333321 11234455443322111
Q ss_pred hhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHH--HhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHH
Q psy13808 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN--FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157 (190)
Q Consensus 80 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~--~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~ 157 (190)
.....+++++++++|||||||.||+|+++|+++..... .....+++.+ +|++++..|++|..++.. ++.++.
T Consensus 169 ----~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~~-~~~~l~ 242 (539)
T PRK07008 169 ----DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSA-RDAVLPVVPMFHVNAWGL-PYSAPL 242 (539)
T ss_pred ----CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCC-CceEEecCchHHhhhHHH-HHHHHh
Confidence 01234678899999999999999999999999875432 2234566776 899999999999887544 577889
Q ss_pred hCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 158 HGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 158 ~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.|+++++.++.++++.+++.++++++|++.++
T Consensus 243 ~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~ 274 (539)
T PRK07008 243 TGAKLVLPGPDLDGKSLYELIEAERVTFSAGV 274 (539)
T ss_pred cCceEEEecCCcCHHHHHHHHHHcCCEEEEec
Confidence 99999998667899999999999999998763
No 69
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.83 E-value=7e-20 Score=158.06 Aligned_cols=165 Identities=16% Similarity=0.139 Sum_probs=113.4
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC-------CCCCCCCcEEEEeec----------CcccHHHHHhcCCCcch
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK-------ADALPTKLTRLALRM----------GTFRLSDIMQGAGPEYH 78 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-------~~~~~~~~~~i~~~~----------~~~~~~~l~~~~~~~~~ 78 (190)
|+++.++++++.++++++++++++++..... ....+.. .++.+.. ...+|++++..+.....
T Consensus 175 pl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~-~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (700)
T PTZ00216 175 TVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNT-TIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGS 253 (700)
T ss_pred eeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCce-EEEEECCCccccccCCceEEEHHHHHHhCCcccc
Confidence 4478899999999999999999999875221 1112222 3333311 12457776654321100
Q ss_pred hhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----C-CcCCCcEEEEeCCchhHHHHHHHHH
Q psy13808 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----E-FDKTDHKILLQVPMFHTFGTAMGIL 153 (190)
Q Consensus 79 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~-~~~~~~~~l~~~pl~h~~g~~~~~~ 153 (190)
. ........++|+++|+|||||||.||||+++|+|+.+.+......+ + +.+ +|++++.+|++|.++... ..
T Consensus 254 -~-~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~-~d~~ls~lPl~H~~~~~~-~~ 329 (700)
T PTZ00216 254 -H-HPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE-DETYCSYLPLAHIMEFGV-TN 329 (700)
T ss_pred -c-cccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC-CCEEEEEChHHHHHHHHH-HH
Confidence 0 0011334689999999999999999999999999998776654433 2 345 899999999999998654 44
Q ss_pred HHHHhCCEEEEcCCCCChHHHHH-------HHHHCCceEEecc
Q psy13808 154 NAMNHGSTTVVPAPSFKPMDSLR-------AIAKEKCMEYLTK 189 (190)
Q Consensus 154 ~~l~~G~~vv~~~~~~~~~~~~~-------~i~~~~iT~l~~t 189 (190)
..+..|+++++. ++..+++ .++++++|++.++
T Consensus 330 ~~l~~G~~v~~~----~~~~l~~~~~~~~~~l~~~~pT~~~~v 368 (700)
T PTZ00216 330 IFLARGALIGFG----SPRTLTDTFARPHGDLTEFRPVFLIGV 368 (700)
T ss_pred HHHHcCCEEEEC----CHHHhhhhhccccchHHHcCCcEEEec
Confidence 557778877663 4555555 6899999998764
No 70
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=2.2e-19 Score=149.33 Aligned_cols=167 Identities=23% Similarity=0.299 Sum_probs=129.4
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee--------cCcccHHHHHhcCCCcchhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR--------MGTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~--------~~~~~~~~l~~~~~~~~~~~ 80 (190)
-+++++.++.+++..+++.+++++++++..... ...++..+.++... .....+.+++........
T Consensus 83 ~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (521)
T PRK06187 83 LHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASDTFD-- 160 (521)
T ss_pred EEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCccCC--
Confidence 345588899999999999999999999987322 12334444555441 222445555554332211
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
.....++++++++|||||||.||++.++|+++..........+++.+ +|++++..|++|.+++... +.++..|+
T Consensus 161 ----~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~-~~~l~~G~ 234 (521)
T PRK06187 161 ----FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSR-DDVYLVIVPMFHVHAWGLP-YLALMAGA 234 (521)
T ss_pred ----CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCC-CCEEEEeCCchHHhhHHHH-HHHHHhCC
Confidence 23456789999999999999999999999999988877777888887 9999999999999987664 44999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. +.+++..+++.++++++|.++++
T Consensus 235 ~~v~~-~~~~~~~~~~~l~~~~~t~l~~~ 262 (521)
T PRK06187 235 KQVIP-RRFDPENLLDLIETERVTFFFAV 262 (521)
T ss_pred EEEec-CCCCHHHHHHHHHHhCCeEEEch
Confidence 99998 56799999999999999998763
No 71
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=1.8e-19 Score=151.96 Aligned_cols=170 Identities=15% Similarity=0.189 Sum_probs=117.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC----CCCCCCcEEEEeec-----------------------------
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA----DALPTKLTRLALRM----------------------------- 61 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~~~~~~~~~i~~~~----------------------------- 61 (190)
|++||.++.+++.++++++++++++++...... ......+.++....
T Consensus 103 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (562)
T PRK05677 103 VNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLP 182 (562)
T ss_pred eecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCCc
Confidence 455899999999999999999999987652210 00011222222100
Q ss_pred CcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC--CcCCCcEEEEe
Q psy13808 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE--FDKTDHKILLQ 139 (190)
Q Consensus 62 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~~~~l~~ 139 (190)
....+.+.+....... .......++++++++|||||||.||||+++|+++..........+. +....+++++.
T Consensus 183 ~~~~~~~~~~~~~~~~-----~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (562)
T PRK05677 183 QAVKFNDALAKGAGQP-----VTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAP 257 (562)
T ss_pred ccccHHHHHhcCCCCC-----CCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEc
Confidence 0111222222111100 0112346789999999999999999999999999876655444332 33325789999
Q ss_pred CCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 140 ~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+|++|.+++.+.++.++..|+++++.+..++++.+++.|+++++|+++++
T Consensus 258 ~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 307 (562)
T PRK05677 258 LPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGL 307 (562)
T ss_pred CcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecH
Confidence 99999999877788888899988887566899999999999999998753
No 72
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.83 E-value=1.7e-19 Score=151.16 Aligned_cols=172 Identities=17% Similarity=0.149 Sum_probs=120.2
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCC---CCcEEEEeecCc----ccHHHHHhcCCCcchhhhhhhhc
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALP---TKLTRLALRMGT----FRLSDIMQGAGPEYHRRREQISK 86 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~---~~~~~i~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~ 86 (190)
-++++|.++.+++.+++++++++.++++.........+ .....+...... ..+.......... .. .....
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~ 171 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEP-TP--ATSTP 171 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCC-Cc--ccccc
Confidence 34559999999999999999999999876522211111 111111111000 0000000000000 00 00011
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
...+++.++|+|||||||.||||+++|+++...+......+++.+ +|++++.+|++|..++...++.++..|+++++..
T Consensus 172 ~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~ 250 (534)
T PRK05852 172 EGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSP-RDATVAVMPLYHGHGLIAALLATLASGGAVLLPA 250 (534)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCC-cceEEEecCcchhHHHHHHHHHHHhcCCeEEeCC
Confidence 123467899999999999999999999999988877777788887 9999999999999998888899999999999853
Q ss_pred -CCCChHHHHHHHHHCCceEEecc
Q psy13808 167 -PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 167 -~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+++..+++.|+++++|+++++
T Consensus 251 ~~~~~~~~~~~~i~~~~~t~~~~~ 274 (534)
T PRK05852 251 RGRFSAHTFWDDIKAVGATWYTAV 274 (534)
T ss_pred CcCcCHHHHHHHHHHcCCcEEEcC
Confidence 35899999999999999998764
No 73
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.83 E-value=2.1e-19 Score=149.08 Aligned_cols=168 Identities=15% Similarity=0.089 Sum_probs=123.5
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecC-cccHHHHHhcCCCcchhhhhhhhccCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMG-TFRLSDIMQGAGPEYHRRREQISKSLNC 90 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 90 (190)
..-+++++.++.+++.++++.+++++++++.......... ...+..... ...+..+....... .......+
T Consensus 77 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 148 (497)
T PRK06145 77 AVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE--TPKIVIDAAAQADSRRLAQGGLEI------PPQAAVAP 148 (497)
T ss_pred cEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc--cceEEecCcccchhHHHhccCCCC------CCCCCCCc
Confidence 4556789999999999999999999999987633221111 122222111 11111111111000 01123577
Q ss_pred CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC
Q psy13808 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK 170 (190)
Q Consensus 91 ~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~ 170 (190)
+++++++|||||||.||+|+++|+++..........+++.. +++++...|++|.+++.+..+.++..|+++++. +.++
T Consensus 149 ~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~ 226 (497)
T PRK06145 149 TDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTA-SERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFD 226 (497)
T ss_pred cceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCC-CcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCC
Confidence 89999999999999999999999999876655556667776 899999999999999877677889999999998 6899
Q ss_pred hHHHHHHHHHCCceEEecc
Q psy13808 171 PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~t 189 (190)
+..+++.++++++|++.++
T Consensus 227 ~~~~~~~i~~~~~t~~~~~ 245 (497)
T PRK06145 227 PEAVLAAIERHRLTCAWMA 245 (497)
T ss_pred HHHHHHHHHHhCCeEEEeh
Confidence 9999999999999998753
No 74
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.82 E-value=2.2e-19 Score=149.58 Aligned_cols=169 Identities=21% Similarity=0.166 Sum_probs=127.0
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEe--------ecCcccHHHHHhcCCCcch
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLAL--------RMGTFRLSDIMQGAGPEYH 78 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~--------~~~~~~~~~l~~~~~~~~~ 78 (190)
..-++++|.++.+++.++++.+++++++++...... .... ...+... ......+.++........
T Consensus 86 ~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (523)
T PRK08316 86 AVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP-VDTLILSLVLGGREAPGGWLDFADWAEAGSVAE- 163 (523)
T ss_pred cEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC-ccceeeeecccccccccchhhHHHHHhcCCCcc-
Confidence 344667999999999999999999999998763221 0111 1111111 112334444443322111
Q ss_pred hhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHh
Q psy13808 79 RRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNH 158 (190)
Q Consensus 79 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~ 158 (190)
......++++++++|||||||.||+|.++|+++..........+++.+ +++++..+|++|..++...++.++..
T Consensus 164 -----~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~g~~~~~~~~~~~ 237 (523)
T PRK08316 164 -----PDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSA-DDIPLHALPLYHCAQLDVFLGPYLYV 237 (523)
T ss_pred -----CccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCC-CceEEEccCCchhhhHHHHHHHHHhc
Confidence 123457789999999999999999999999999988776677778887 99999999999999977767778899
Q ss_pred CCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 159 GSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 159 G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
|+++++. +.++++.+++.++++++|++.++
T Consensus 238 G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 267 (523)
T PRK08316 238 GATNVIL-DAPDPELILRTIEAERITSFFAP 267 (523)
T ss_pred CceEEEe-cCCCHHHHHHHHHHhCCeEEEeC
Confidence 9999998 67899999999999999998764
No 75
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.82 E-value=1.5e-19 Score=149.27 Aligned_cols=154 Identities=17% Similarity=0.176 Sum_probs=121.2
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
..-|+++|.++.+++.++++.++++.++++.+... ..++... .. .... .... .....++
T Consensus 70 ~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~-~~~~~~~---~~-~~~~---------~~~~-------~~~~~~~ 128 (471)
T PRK07787 70 VPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP-AGLPHVP---VR-LHAR---------SWHR-------YPEPDPD 128 (471)
T ss_pred cEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc-cccccee---ee-cccc---------cccc-------CCCCCCC
Confidence 34468899999999999999999999999864111 1111111 00 0000 0000 1124678
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCCh
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~ 171 (190)
++++++|||||||.||||+++|+++..........+++.+ ++++++.+|++|.+|+...++.++..|+++++. +.+++
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~ 206 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTA-DDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT-GRPTP 206 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCc-cceeEeccCCeeechhHHHHHHHHhcCCEEEec-CCCCH
Confidence 9999999999999999999999999988877777788877 899999999999999888899999999999998 67999
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
..+++.++ +++|++.++
T Consensus 207 ~~~~~~i~-~~~t~~~~~ 223 (471)
T PRK07787 207 EAYAQALS-EGGTLYFGV 223 (471)
T ss_pred HHHHHHHh-hCceEEEcc
Confidence 99999999 999998753
No 76
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.82 E-value=2.4e-19 Score=151.38 Aligned_cols=173 Identities=22% Similarity=0.199 Sum_probs=121.2
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC-CC---CCCcEEEEe------------------------------
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD-AL---PTKLTRLAL------------------------------ 59 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~-~~---~~~~~~i~~------------------------------ 59 (190)
-|++||.++.+++.++++++++++++++....... ++ .....++..
T Consensus 109 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 109 VVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred EeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccccccc
Confidence 35568999999999999999999999877622100 00 011111111
Q ss_pred -ecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc-CCcCCCcEEE
Q psy13808 60 -RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL-EFDKTDHKIL 137 (190)
Q Consensus 60 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~~~~~l 137 (190)
..+...|.+++........ .........++++++++|||||||.||+|+++|+++..........+ ++..++++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDG--SDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred CCCcceeHHHHhhccccccc--cccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 0122334444433211100 00111235678999999999999999999999999987665443332 2333378999
Q ss_pred EeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 138 LQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 138 ~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+|++|.+|+.+.+..++..|+++++. +.++++.+++.++++++|++.++
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~ 317 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLL-PAPDIDLILDAMKKHPPTWLPGV 317 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEe-CCCCHHHHHHHHHHhCCEEEEch
Confidence 9999999999877778889999999998 67899999999999999999763
No 77
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.82 E-value=7.7e-20 Score=157.92 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=118.9
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.|++||.++.+++.++++++++++++++...... +.... ++ ...+++........ .......++++
T Consensus 82 ~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~--~~~~~-~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~ 147 (705)
T PRK06060 82 AFLANPELHRDDHALAARNTEPALVVTSDALRDR--FQPSR-VA-------EAAELMSEAARVAP----GGYEPMGGDAL 147 (705)
T ss_pred EEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhh--hcccc-cc-------hhhhhhhhccccCC----CCCCCCCCCCe
Confidence 4566999999999999999999999998652211 11100 00 11122111110000 00123467899
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhh-hhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChH
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIG-KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~-~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~ 172 (190)
++++|||||||.||||+++|+++.+...... ..+++.+ .|++++..|++|..++...++.++..|+++++.+..+++.
T Consensus 148 a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 226 (705)
T PRK06060 148 AYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTP-EDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPE 226 (705)
T ss_pred EEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCC-cceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHH
Confidence 9999999999999999999999988765543 4567777 8999999999999887677888999999999986678999
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.++..++++++|+++++
T Consensus 227 ~~~~~i~~~~~t~~~~~ 243 (705)
T PRK06060 227 AAAILSARFGPSVLYGV 243 (705)
T ss_pred HHHHHHHhcCCeEEeeH
Confidence 99999999999998753
No 78
>PRK05691 peptide synthase; Validated
Probab=99.82 E-value=9.6e-20 Score=179.35 Aligned_cols=165 Identities=13% Similarity=0.092 Sum_probs=125.8
Q ss_pred ccccccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCC--cEEEEeecCcccHHHHHhcCCCcchhhhhh
Q psy13808 11 KEDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTK--LTRLALRMGTFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 11 ~~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~--~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~ 83 (190)
.|..||++|.++.+++.++++++++++++++...... ..+... ..++. +++........ ..
T Consensus 3794 G~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~ 3861 (4334)
T PRK05691 3794 GAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLV-------WEEVQAGEVAS-----HN 3861 (4334)
T ss_pred CcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceee-------ecccccccccc-----cC
Confidence 3456677999999999999999999999999863221 111111 11111 11111111000 01
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
......|++.+||+|||||||+||||+++|+++.+.+......+++++ +|+++...++.|..+ ++.++.++..|++++
T Consensus 3862 ~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~fd~s-~~~~~~~l~~G~~l~ 3939 (4334)
T PRK05691 3862 PGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSE-ADVIAQTASQSFDIS-VWQFLAAPLFGARVE 3939 (4334)
T ss_pred CCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCc-cceEEEecCCchhHH-HHHHHHHHhCCCEEE
Confidence 123457899999999999999999999999999999988888889988 999999999999987 677999999999999
Q ss_pred EcCC--CCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAP--SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~--~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++ ..++..+++.++++++|++.++
T Consensus 3940 i~~~~~~~~~~~l~~~~~~~~vt~~~~~ 3967 (4334)
T PRK05691 3940 IVPNAIAHDPQGLLAHVQAQGITVLESV 3967 (4334)
T ss_pred EcCccccCCHHHHHHHHHHcCCeEEEeC
Confidence 9853 3689999999999999998764
No 79
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.82 E-value=4.1e-19 Score=149.79 Aligned_cols=172 Identities=16% Similarity=0.116 Sum_probs=120.5
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCC----CCCCCCcEEEEee-cC--------------------cccHH
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA----DALPTKLTRLALR-MG--------------------TFRLS 67 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~~~~~~~~~i~~~-~~--------------------~~~~~ 67 (190)
..++++|.++.+++.+++++++++++++++..... ......+.++... .+ ...+.
T Consensus 109 ~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (567)
T PRK06178 109 VHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAI 188 (567)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccccc
Confidence 34567999999999999999999999998763221 0001122222210 00 00111
Q ss_pred HHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh-hcCCcCCCcEEEEeCCchhHH
Q psy13808 68 DIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK-RLEFDKTDHKILLQVPMFHTF 146 (190)
Q Consensus 68 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~-~~~~~~~~~~~l~~~pl~h~~ 146 (190)
++........ .........++++++|+|||||||.||+|+++|+++......... ...+.+ +|+++..+|++|.+
T Consensus 189 ~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~ 264 (567)
T PRK06178 189 DLLPALRACT---APVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGE-DSVFLSFLPEFWIA 264 (567)
T ss_pred cHHHHhhccc---cccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCC-CcEEEEecchHHHH
Confidence 1111110000 000112356789999999999999999999999998876544332 345565 89999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 147 g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
|+...++.++..|+++++. ++++++.++..++++++|.+..+
T Consensus 265 g~~~~~~~~l~~G~~~~l~-~~~~~~~~~~~i~~~~~t~~~~~ 306 (567)
T PRK06178 265 GENFGLLFPLFSGATLVLL-ARWDAVAFMAAVERYRVTRTVML 306 (567)
T ss_pred HHHHHHHHHHHcCceEEEe-CCCCHHHHHHHHHHhCCeEEecc
Confidence 9877788899999999999 68999999999999999998653
No 80
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.82 E-value=3.5e-19 Score=147.94 Aligned_cols=165 Identities=22% Similarity=0.233 Sum_probs=122.8
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-C---CCCCCcEEEEee-cCcccHHHHHhcCCCcchhhhhhhhccC
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-D---ALPTKLTRLALR-MGTFRLSDIMQGAGPEYHRRREQISKSL 88 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~---~~~~~~~~i~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 88 (190)
.|+++|.++.+++.++++.+++++++++...... . .......++.+. .....+.+........ ......
T Consensus 80 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 153 (504)
T PRK07514 80 FLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAPDD------FETVPR 153 (504)
T ss_pred EEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcCcc------cCcccC
Confidence 3567999999999999999999999998763321 0 111122233321 1122233322211111 112335
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
.++++++++|||||||.||+|+++|+++..........+++.+ +|++++..|++|..|+.+.++.++..|+++++. +.
T Consensus 154 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~ 231 (504)
T PRK07514 154 GADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTP-DDVLIHALPIFHTHGLFVATNVALLAGASMIFL-PK 231 (504)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCC-ccEEEEecchHHHHHHHHHHHHHHhcCcEEEEC-CC
Confidence 6789999999999999999999999999988877777778887 899999999999999887888999999999998 67
Q ss_pred CChHHHHHHHHHCCceEEec
Q psy13808 169 FKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~ 188 (190)
++++.+++.++ ++|++.+
T Consensus 232 ~~~~~~~~~i~--~~t~~~~ 249 (504)
T PRK07514 232 FDPDAVLALMP--RATVMMG 249 (504)
T ss_pred CCHHHHHHHHH--hheeeec
Confidence 89999999994 6888765
No 81
>PRK05691 peptide synthase; Validated
Probab=99.81 E-value=2.5e-19 Score=176.51 Aligned_cols=162 Identities=14% Similarity=0.140 Sum_probs=123.2
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.|+++|.++.+++.++++++++++++++...... ++....+..+. .+++........ .+.....++++
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~ 1275 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLER--LPQAEGVSAIA-----LDSLHLDSWPSQ-----APGLHLHGDNL 1275 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhh--cccccCceEEe-----eccccccccCCC-----CCCCCCCCCCe
Confidence 4567999999999999999999999998763321 11111111110 000000000000 01123567999
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--CCCh
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP--SFKP 171 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~--~~~~ 171 (190)
++++|||||||+||||+++|+++.+.+......+++.+ +|++++..|++|..+ ++.++.+|..|+++++.++ .+++
T Consensus 1276 a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~-~d~~l~~~~~~fd~s-~~~~~~~L~~G~~l~i~~~~~~~~~ 1353 (4334)
T PRK05691 1276 AYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDD-SDVLMQKAPISFDVS-VWECFWPLITGCRLVLAGPGEHRDP 1353 (4334)
T ss_pred EEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCC-CCEEEEeCCccHHHH-HHHHHHHHhCCCEEEEcCccccCCH
Confidence 99999999999999999999999998888888888887 999999999999887 5678999999999999853 4799
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
+.+++.++++++|++.++
T Consensus 1354 ~~l~~~i~~~~vt~~~~~ 1371 (4334)
T PRK05691 1354 QRIAELVQQYGVTTLHFV 1371 (4334)
T ss_pred HHHHHHHHHcCCeEEECc
Confidence 999999999999999865
No 82
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.81 E-value=6.9e-19 Score=147.73 Aligned_cols=167 Identities=18% Similarity=0.218 Sum_probs=120.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec----------CcccHHHHHhcCCCcchh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM----------GTFRLSDIMQGAGPEYHR 79 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~----------~~~~~~~l~~~~~~~~~~ 79 (190)
+++||.++.+++.++++.++++.++++.+... ....+..+.++...+ +...+.+++.......
T Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 169 (542)
T PRK06018 92 HTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEADGDF-- 169 (542)
T ss_pred eccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCCccc--
Confidence 46799999999999999999999999876221 122344444444311 1123444443322110
Q ss_pred hhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHH-HHH-HHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHH
Q psy13808 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI-NNS-NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMN 157 (190)
Q Consensus 80 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~-~~~-~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~ 157 (190)
......++++++|+|||||||.||||+++|++++ ... ......+++.. +|+++...|++|.+++.. .+.++.
T Consensus 170 ----~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~p~~h~~~~~~-~~~~~~ 243 (542)
T PRK06018 170 ----AWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSA-ADTMLPVVPLFHANSWGI-AFSAPS 243 (542)
T ss_pred ----CcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCC-CCEEEEecCHHHHhhhHH-HHhhhh
Confidence 0123466889999999999999999999999753 222 22344566776 899999999999988655 467789
Q ss_pred hCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 158 HGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 158 ~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.|+++++....++++.+++.++++++|++.++
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~ 275 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGV 275 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecC
Confidence 99999987557899999999999999998763
No 83
>KOG1175|consensus
Probab=99.81 E-value=2.2e-19 Score=149.40 Aligned_cols=176 Identities=18% Similarity=0.181 Sum_probs=135.1
Q ss_pred cCCCcccccccC-------------------------CCCCCccchhhhhhccCCCCCCCCCCCCCCCC-----------
Q psy13808 6 RNRGEKEDRIGE-------------------------SQPFRERTLSHQDKIRPGRESNPRPSAYKADA----------- 49 (190)
Q Consensus 6 ~~~~~~~~~v~i-------------------------~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~----------- 49 (190)
..|-+|||||.+ ...+++.++...+++++||+|++........+
T Consensus 115 ~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a 194 (626)
T KOG1175|consen 115 KCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEA 194 (626)
T ss_pred hcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHH
Confidence 457888888876 67789999999999999999999987222110
Q ss_pred ---C-----CCCcEEEEe-ecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHH-H
Q psy13808 50 ---L-----PTKLTRLAL-RMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN-N 119 (190)
Q Consensus 50 ---~-----~~~~~~i~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~-~ 119 (190)
. +....+++. ...+..|+..+........ ....+.+|+.+|+|||||||.||++++++..... .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~~~~------~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~ 268 (626)
T KOG1175|consen 195 LLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASPEHP------CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGA 268 (626)
T ss_pred hhcccccccccceeeEEecccccccHHHHhhhcCCCCC------ceecCccCceEEEecCCCCCCCCceeeccCcchHHH
Confidence 0 111111111 2233445555554443321 4678899999999999999999999999987554 4
Q ss_pred HHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC-CCChHHHHHHHHHCCceEEec
Q psy13808 120 SNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-SFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 120 ~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-~~~~~~~~~~i~~~~iT~l~~ 188 (190)
+.....++.+++ .|++++...+.|+.|..+.++++|..|+++++.+. .+++..+++.+.+|++|++++
T Consensus 269 ~~~~~~~~d~q~-~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t 337 (626)
T KOG1175|consen 269 ALTSRYHFDLQP-SDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYT 337 (626)
T ss_pred hhhcceeccCCC-cceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEe
Confidence 455667778887 99999999999999988888999999999999864 359999999999999999986
No 84
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.81 E-value=3.4e-19 Score=163.53 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=118.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CC--------C---CCCcEEEEeecCc-----cc--HHHHHhcCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DA--------L---PTKLTRLALRMGT-----FR--LSDIMQGAGP 75 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~--------~---~~~~~~i~~~~~~-----~~--~~~l~~~~~~ 75 (190)
|+++|.++++++.++++++++++++++...... .. . .....+....... .. ..+.+.....
T Consensus 323 vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1389)
T TIGR03443 323 SVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGETDVLAPYQA 402 (1389)
T ss_pred eccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccccccccccccccc
Confidence 356999999999999999999999987542110 00 0 0011111100000 00 0000000000
Q ss_pred cchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHH
Q psy13808 76 EYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNA 155 (190)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 155 (190)
... ........++++++|+|||||||.||||+++|+++.+.+......+++.+ +|+++...|++|..+ ++.++.+
T Consensus 403 ~~~---~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~~~~~~~~~d~~-~~~i~~~ 477 (1389)
T TIGR03443 403 LKD---TPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSE-NDKFTMLSGIAHDPI-QRDMFTP 477 (1389)
T ss_pred ccc---CCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC-CCEEEEecCceecch-HHHHHHH
Confidence 000 00012346789999999999999999999999999998888888888887 999999999999876 5678999
Q ss_pred HHhCCEEEEcCCC--CChHHHHHHHHHCCceEEecc
Q psy13808 156 MNHGSTTVVPAPS--FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 156 l~~G~~vv~~~~~--~~~~~~~~~i~~~~iT~l~~t 189 (190)
|..|+++++.++. .++..+++.|+++++|++.++
T Consensus 478 L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~ 513 (1389)
T TIGR03443 478 LFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLT 513 (1389)
T ss_pred HhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeC
Confidence 9999999998532 478899999999999998764
No 85
>PRK09274 peptide synthase; Provisional
Probab=99.80 E-value=4.8e-19 Score=148.86 Aligned_cols=161 Identities=19% Similarity=0.201 Sum_probs=114.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCC-----CCCCCCCCCcEEEEeec----CcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSA-----YKADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~-----~~~~~~~~~~~~i~~~~----~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
|++||.++.+++.+++++++++++++++.. +.....+....++.... +...+.++........ ...
T Consensus 94 v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 168 (552)
T PRK09274 94 VLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGAAAP-----FPM 168 (552)
T ss_pred EEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCcccc-----CCC
Confidence 356999999999999999999999987531 11111122223332211 1123444432111111 012
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
....++++++|+|||||||.||+|+++|+++...+......+++.+ +++.++..|++|.++ +..|+++++.
T Consensus 169 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~~~~~~pl~~~~~--------~~~g~~~~~~ 239 (552)
T PRK09274 169 ADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEP-GEIDLPTFPLFALFG--------PALGMTSVIP 239 (552)
T ss_pred CCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCC-CceeeeccCHHHhhh--------hhhCCeEEec
Confidence 3346789999999999999999999999999988877777788887 899999999987654 2358888876
Q ss_pred C------CCCChHHHHHHHHHCCceEEecc
Q psy13808 166 A------PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~------~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+ ..++++.+++.|+++++|+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 269 (552)
T PRK09274 240 DMDPTRPATVDPAKLFAAIERYGVTNLFGS 269 (552)
T ss_pred CcccccccccCHHHHHHHHHHcCCeEEecc
Confidence 3 14789999999999999999864
No 86
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.80 E-value=9.7e-19 Score=146.24 Aligned_cols=168 Identities=17% Similarity=0.171 Sum_probs=117.5
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEee--cCcccHHHHHhcCCCcchhhhhhhhc
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALR--MGTFRLSDIMQGAGPEYHRRREQISK 86 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~ 86 (190)
-++++|.++.+++.++++.++++.++++.+.... ...+....++... ....++.+++........ ...
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 158 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGARV-----ANA 158 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCCCC-----Ccc
Confidence 3456899999999999999999999998763211 1122333344331 112356665543321111 123
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhh-hhc-CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG-KRL-EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~-~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
...++++++|+|||||||.||+|+++|+++........ ..+ +... .|+++..+|++|..++.. ++ .+..|++.++
T Consensus 159 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~~-~~-~~~~g~~~~~ 235 (528)
T PRK07470 159 AVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTE-QDASLVVAPLSHGAGIHQ-LC-QVARGAATVL 235 (528)
T ss_pred cCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCc-ccEEEEeccchhHHHHHH-HH-HHhcCceEEE
Confidence 45678999999999999999999999999876543322 222 4555 899999999999998643 44 5677777766
Q ss_pred cC-CCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PA-PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~-~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+ ..++++.+++.|+++++|++.++
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~t~~~~~ 261 (528)
T PRK07470 236 LPSERFDPAEVWALVERHRVTNLFTV 261 (528)
T ss_pred ecccCcCHHHHHHHHHhcCCeEEech
Confidence 53 46899999999999999998764
No 87
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.80 E-value=1.9e-18 Score=139.71 Aligned_cols=164 Identities=17% Similarity=0.129 Sum_probs=120.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
+++++.++.+++.++++.+++++++++............. .+.... .+............. .....+++++
T Consensus 53 v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~ 123 (408)
T TIGR01733 53 VPLDPAYPAERLAFILEDAGARLLLTDSALASRLAGLVLP-IILVDP---LELAALDDAPAPPPP-----DAPSGPDDLA 123 (408)
T ss_pred EEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhccccCCc-eEEech---hhhhhcccccccccc-----cCCCCCCCcE
Confidence 4568999999999999999999999998744322211112 222111 111111111111000 1114578999
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC--hH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK--PM 172 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~--~~ 172 (190)
+++|||||||.||+|+++|+++..........+++.+ +|++++..|++|.+++ +.++.++..|+++++.++... ++
T Consensus 124 ~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~ 201 (408)
T TIGR01733 124 YVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYGLDP-DDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAA 201 (408)
T ss_pred EEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC-CceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHH
Confidence 9999999999999999999999998888777888887 9999999999999985 558999999999999854333 78
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++++++|.+.++
T Consensus 202 ~~~~~~~~~~~t~l~~~ 218 (408)
T TIGR01733 202 LLAALIAEHPVTVLNLT 218 (408)
T ss_pred HHHHHHHHcCceEEEeC
Confidence 99999999999998864
No 88
>PLN02479 acetate-CoA ligase
Probab=99.80 E-value=1.5e-18 Score=146.50 Aligned_cols=166 Identities=15% Similarity=0.155 Sum_probs=114.2
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----C---C--CC--CCcEEEEee--------------cCcccHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----D---A--LP--TKLTRLALR--------------MGTFRLSDI 69 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~---~--~~--~~~~~i~~~--------------~~~~~~~~l 69 (190)
++||.++.+++.++++.++++++++++..... . . .. ....+++.. .+...+.++
T Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T PLN02479 99 CVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKF 178 (567)
T ss_pred EeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHH
Confidence 55999999999999999999999998763211 0 0 00 011122221 122235555
Q ss_pred HhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 70 MQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
+....+... . ....+.+++++++|||||||.||||+++|+++..........+++.. +++++..+|++|.+++.
T Consensus 179 ~~~~~~~~~----~-~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~~~~ 252 (567)
T PLN02479 179 LETGDPEFA----W-KPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNE-GAVYLWTLPMFHCNGWC 252 (567)
T ss_pred Hhccccccc----c-CCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCC-CCEEEEecchhhhhhHH
Confidence 443221100 0 01223456788999999999999999999998776655555667776 89999999999999866
Q ss_pred HHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...+..|.++++ ..++++.+++.++++++|++.++
T Consensus 253 ~~~~~~~~~g~~~~~--~~~~~~~~~~~l~~~~~t~~~~~ 290 (567)
T PLN02479 253 FTWTLAALCGTNICL--RQVTAKAIYSAIANYGVTHFCAA 290 (567)
T ss_pred HHHHHHhhcCceEec--cCCCHHHHHHHHHHcCCeEEEec
Confidence 544445666665554 46899999999999999998763
No 89
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.80 E-value=2.8e-19 Score=152.19 Aligned_cols=157 Identities=19% Similarity=0.256 Sum_probs=106.7
Q ss_pred CCCCC--ccchhhhhhccCCCCCCCCCCCCCC-----CCCCC--CcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccC
Q psy13808 18 SQPFR--ERTLSHQDKIRPGRESNPRPSAYKA-----DALPT--KLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSL 88 (190)
Q Consensus 18 ~p~~~--~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 88 (190)
+|.++ ++++.++++++++++++++...... ..++. ...++... ++....... ......
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~~~~~~~------~~~~~~ 190 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAID-------AIPDSAGES------FVPVEL 190 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEec-------ccccccccc------ccCCCC
Confidence 46665 7899999999999999998652210 11121 12233221 110000000 001234
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC-CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE-FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
.++++++|+|||||||+||||+++|+++.++.......++ +.+ +++.++.+|++|..|+... +.+++.|+++++..+
T Consensus 191 ~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~-~~~~l~~~Pl~h~~g~~~~-~~~~~~gg~~~~~~~ 268 (612)
T PRK12476 191 DTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDR-NTHGVSWLPLYHDMGLSMI-GFPAVYGGHSTLMSP 268 (612)
T ss_pred CCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCC-CceEEEeCCcccccchHHH-HHHHhcCCeEEEECH
Confidence 6789999999999999999999999999877666656666 666 8999999999999997654 444455666665533
Q ss_pred -CC--ChHHHHHHHH--HCCceEEecc
Q psy13808 168 -SF--KPMDSLRAIA--KEKCMEYLTK 189 (190)
Q Consensus 168 -~~--~~~~~~~~i~--~~~iT~l~~t 189 (190)
.+ ++..+++.++ ++++|.+.++
T Consensus 269 ~~~~~~p~~~~~~i~~~~~~~t~~~~~ 295 (612)
T PRK12476 269 TAFVRRPQRWIKALSEGSRTGRVVTAA 295 (612)
T ss_pred HHHHHHHHHHHHHHhhhccCCeEEEeC
Confidence 23 8999999995 4888887653
No 90
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.79 E-value=2.2e-18 Score=143.83 Aligned_cols=167 Identities=18% Similarity=0.168 Sum_probs=118.3
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec--------CcccHHHHHhcCCCcchhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM--------GTFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~~~~~~~ 80 (190)
.++++|.++.+++.++++.+++++++++..... ....+..+.++.+.. +..++++++.......
T Consensus 80 ~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (533)
T PRK07798 80 PVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSPER--- 156 (533)
T ss_pred EEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCCcC---
Confidence 345688999999999999999999999876221 122344444544421 1235666554432211
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---------cCC------cCCCcEEEEeCCchhH
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---------LEF------DKTDHKILLQVPMFHT 145 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---------~~~------~~~~~~~l~~~pl~h~ 145 (190)
.......+.++|+|||||||.||+|+++|+++.......... ..+ .. +++++...|++|.
T Consensus 157 ----~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pl~~~ 231 (533)
T PRK07798 157 ----DFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGP-GMRRFPAPPLMHG 231 (533)
T ss_pred ----CCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCC-CceEEEecchhhh
Confidence 011122345789999999999999999999987654332111 111 34 7899999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEcC-CCCChHHHHHHHHHCCceEEecc
Q psy13808 146 FGTAMGILNAMNHGSTTVVPA-PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 146 ~g~~~~~~~~l~~G~~vv~~~-~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++. .++.++..|+++++.+ ..+++..+++.++++++|++..+
T Consensus 232 ~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 275 (533)
T PRK07798 232 AGQW-AAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIV 275 (533)
T ss_pred hhHH-HHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEec
Confidence 9965 6889999999999994 17899999999999999998753
No 91
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.79 E-value=5.9e-19 Score=145.33 Aligned_cols=143 Identities=9% Similarity=0.022 Sum_probs=102.9
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRD 92 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
..|++||.++.+|++++++++++++++++.+..... . . ... .. .....+++
T Consensus 71 ~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------~-~----------~~~-~~-------~~~~~~~~ 121 (452)
T PRK07445 71 PVFLANPHWGQQEWQQVLNLVQPDQIWGLDQLKLSH----------P-P----------PLP-SQ-------GILPNLET 121 (452)
T ss_pred EEEeeccCCCHHHHHHHHHhcCCCEEEecCcccccc----------C-C----------CCC-cc-------ccCCCCCC
Confidence 345669999999999999999999998865421100 0 0 000 00 11235689
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChH
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~ 172 (190)
+++++|||||||.||||++||+++..........+++. .++.++.+|++|.+|+. .++.++..|+++++.+ .....
T Consensus 122 ~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~-~~~~~ 197 (452)
T PRK07445 122 GWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYFQLQ--QVNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILP-YKRLK 197 (452)
T ss_pred cEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHhcCC--CCceEeccCchhhhhHH-HHHHHHHcCCeEEEcC-hHhcc
Confidence 99999999999999999999999988777666666664 34678899999999964 4788999999999983 33223
Q ss_pred HHHHHHHHCCceEEec
Q psy13808 173 DSLRAIAKEKCMEYLT 188 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~ 188 (190)
.......++++|++..
T Consensus 198 ~~~~~~~~~~~t~~~~ 213 (452)
T PRK07445 198 SGQELPPNPSDFFLSL 213 (452)
T ss_pred chhhhhhhcCceEEEe
Confidence 3334445788877654
No 92
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.79 E-value=1.9e-18 Score=143.18 Aligned_cols=156 Identities=20% Similarity=0.232 Sum_probs=116.7
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
++++|.++++++.++++++++++++++....... . . ...++++.......... ......+++++
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~-~-------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 138 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR----T-D-------VEDLAAFIASADALEPA----DTPSIPPERVS 138 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc----c-c-------ccchhhhhhhccccccc----cCCCCCCCCce
Confidence 4568999999999999999999999886532210 0 0 01122222211110000 01234568899
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDS 174 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~ 174 (190)
+++|||||||.||+|+++|+++............... +|++++.+|++|.+|+...+..++..|+++++. +.+++..+
T Consensus 139 ~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~-~~~~~~~~ 216 (488)
T PRK09088 139 LILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDA-HSSFLCDAPMFHIIGLITSVRPVLAVGGSILVS-NGFEPKRT 216 (488)
T ss_pred EEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCC-CcEEEEecchHHHHHHHHHHHHHHhcCCEEEEc-CCCCHHHH
Confidence 9999999999999999999999877666655556666 899999999999999888788899999999998 68999999
Q ss_pred HHHHHH--CCceEEec
Q psy13808 175 LRAIAK--EKCMEYLT 188 (190)
Q Consensus 175 ~~~i~~--~~iT~l~~ 188 (190)
+..+.+ +++|++++
T Consensus 217 ~~~~~~~~~~~t~~~~ 232 (488)
T PRK09088 217 LGRLGDPALGITHYFC 232 (488)
T ss_pred HHHHHhhccCCcEEee
Confidence 999964 88998875
No 93
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.79 E-value=1e-18 Score=146.65 Aligned_cols=165 Identities=16% Similarity=0.181 Sum_probs=112.1
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-CCCCC----CCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-ADALP----TKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
++++|.++.+++.++++.++++++++++.... ...+. ... .+..+.... ........... .........
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~ 167 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIP-VIAVDIAAV--TRESEHSLDAA---SLAGNADQG 167 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccc-eeEeecccc--ccccccccccc---ccccccCCC
Confidence 45699999999999999999999999876321 11111 111 222111100 00000000000 000123356
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
++++++++|||||||.||||+++|+++.++...... ...... +++.++.+|++|..++.. .+.++..|+++++.
T Consensus 168 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~~l~~-~~~~l~~G~~~v~~ 245 (540)
T PRK05857 168 SEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVV-GETTYSPLPATHIGGLWW-ILTCLMHGGLCVTG 245 (540)
T ss_pred CCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcccccccccc-CceeeecCCccccchHHH-HHHHhhcceeEEec
Confidence 789999999999999999999999999876543221 223444 789999999999998654 67889999988764
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+++..+++.|++|++|+++++
T Consensus 246 --~~~~~~~~~~i~~~~it~~~~~ 267 (540)
T PRK05857 246 --GENTTSLLEILTTNAVATTCLV 267 (540)
T ss_pred --CCChhHHHHHHHhcCcceEEeC
Confidence 4689999999999999998753
No 94
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.79 E-value=2.4e-18 Score=143.77 Aligned_cols=167 Identities=19% Similarity=0.181 Sum_probs=121.1
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCC-CC-----CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSA-YK-----ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSL 88 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~-~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 88 (190)
|+++|..+.+++.++++.++++.+++++.. .. ....+....++.... .....++.......... ......
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~ 165 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGP-VPDGVDLLAAAAKFGPA---PLVAAA 165 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCC-ccchhhHHHhhhccCcc---cccccC
Confidence 455888999999999999999999998762 11 112233344443311 11122222111110000 001123
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
.++++++++|||||||.||+|+++|.++..........+++.. ++++++..|++|..++. ++.++..|+++++. +.
T Consensus 166 ~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~-~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~-~~ 241 (524)
T PRK06188 166 LPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPA-DPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVL-AK 241 (524)
T ss_pred CCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCc-CcEEEEecCchhhhhHH--HHHHHHcCCEEEEc-CC
Confidence 4567999999999999999999999999988887777788887 99999999999998853 57889999999999 67
Q ss_pred CChHHHHHHHHHCCceEEecc
Q psy13808 169 FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++..+++.++++++|+++++
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~ 262 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLV 262 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEeh
Confidence 999999999999999998753
No 95
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.79 E-value=1.2e-18 Score=131.08 Aligned_cols=155 Identities=12% Similarity=0.064 Sum_probs=106.9
Q ss_pred CCCcccccccCCCCCCccchhhh------------hhccCCCCCCCCCCCCCCCCCCCCcEEEEe-----e--------c
Q psy13808 7 NRGEKEDRIGESQPFRERTLSHQ------------DKIRPGRESNPRPSAYKADALPTKLTRLAL-----R--------M 61 (190)
Q Consensus 7 ~~~~~~~~v~i~p~~~~~~l~~~------------l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~-----~--------~ 61 (190)
.|-++||||+|--..+.+-+.-+ ++.+++|+++++++.......+ +.++.+ . .
T Consensus 48 ~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~n~s~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 125 (227)
T TIGR03089 48 LDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLAGDPDADVVVTGPDRLAAAAGS--GEVVALSLDPLGRRVAGELPP 125 (227)
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeCCCCCCCEEEeCcchhhhcccC--CceEEEeccccccCCCCCCCC
Confidence 48899999999655555544333 3567778888877644433222 222221 0 1
Q ss_pred CcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCC
Q psy13808 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVP 141 (190)
Q Consensus 62 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~p 141 (190)
+..+|.+.+........ +.+..+++|++.|+||||+ +|+++..+. ...++++ +|+++ .+|
T Consensus 126 ~~~~~~~~~~~~~~~~~-----~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~-~D~~l-~~P 185 (227)
T TIGR03089 126 GVIDFAPEVRVHGDQFA-----PYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPP-GDRVL-VLA 185 (227)
T ss_pred cccchhhhhhccCCCCC-----CCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCC-CCeEE-ecC
Confidence 11233333332111110 0113467899999999985 666665544 5567787 99999 999
Q ss_pred chhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCce
Q psy13808 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCM 184 (190)
Q Consensus 142 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT 184 (190)
+||.+|+...++.+|..|+++|++ ++|+++.+++.|++||||
T Consensus 186 l~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 186 WTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERVT 227 (227)
T ss_pred CCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcCC
Confidence 999999888899999999999999 799999999999999997
No 96
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.79 E-value=4.3e-18 Score=142.90 Aligned_cols=167 Identities=17% Similarity=0.177 Sum_probs=115.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEe-ec---------CcccHHHHHhcCCCcchh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLAL-RM---------GTFRLSDIMQGAGPEYHR 79 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~-~~---------~~~~~~~l~~~~~~~~~~ 79 (190)
++++|.++.+++.+++++++++.++++++.... ...+..+.++.. .. +..++..++....+...
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPDFA- 174 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCcccc-
Confidence 467999999999999999999999999873321 111222122221 00 12234444432211100
Q ss_pred hhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhC
Q psy13808 80 RREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159 (190)
Q Consensus 80 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G 159 (190)
.....+.+++++|+|||||||.||||+++|+++..+.......+.+.. +++.++.+|++|..+....++..+ .|
T Consensus 175 ----~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~-~~~~l~~~pl~h~~~~~~~~~~~~-~~ 248 (545)
T PRK08162 175 ----WTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPK-HPVYLWTLPMFHCNGWCFPWTVAA-RA 248 (545)
T ss_pred ----ccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCC-CCeeEeccCcHhhhhHHHHHHHHH-Hc
Confidence 011224457899999999999999999999998766655555566766 889999999999998766444444 45
Q ss_pred CEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 160 STTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 160 ~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++.++. ..++++.+++.++++++|++.++
T Consensus 249 g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~ 277 (545)
T PRK08162 249 GTNVCL-RKVDPKLIFDLIREHGVTHYCGA 277 (545)
T ss_pred cEEEEe-CCCCHHHHHHHHHHcCCeEEEec
Confidence 555555 56999999999999999998764
No 97
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.78 E-value=3.6e-18 Score=143.33 Aligned_cols=167 Identities=21% Similarity=0.231 Sum_probs=115.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC----C--CCCCCcEEEEeecC-----------------cccHHHHHh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA----D--ALPTKLTRLALRMG-----------------TFRLSDIMQ 71 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~--~~~~~~~~i~~~~~-----------------~~~~~~l~~ 71 (190)
|+++|.++.+++.+++++++++.++++...... . .......+++.... ..++.+++.
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 466899999999999999999999987531100 0 00111222222110 122333332
Q ss_pred cCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh-----hcCCcCCCcEEEEeCCchhHH
Q psy13808 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK-----RLEFDKTDHKILLQVPMFHTF 146 (190)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~-----~~~~~~~~~~~l~~~pl~h~~ 146 (190)
...... ......++++++++|||||||.||||+++|+++......... ...... .+++++..|++|.+
T Consensus 179 ~~~~~~------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 179 GAAAPA------EWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGD-VERVICVLPLFHIY 251 (541)
T ss_pred cCCCCC------CCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCC-CceEEEeccHHHHH
Confidence 211110 012346789999999999999999999999998765432211 111222 57899999999999
Q ss_pred HHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 147 GTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 147 g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++...++.++..|+++++. +.++++.+++.|+++++|++.++
T Consensus 252 ~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 293 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLH-QRFDVAAVFRDIEEKRATVFPGV 293 (541)
T ss_pred HHHHHHHHHHhcCCEEEec-CCCCHHHHHHHHHHcCCeEeech
Confidence 9877788899999999988 68999999999999999998764
No 98
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.78 E-value=1.3e-18 Score=148.49 Aligned_cols=146 Identities=21% Similarity=0.225 Sum_probs=104.0
Q ss_pred ccchhhhhhccCCCCCCCCCCCCCC-----CCCCC--CcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEE
Q psy13808 23 ERTLSHQDKIRPGRESNPRPSAYKA-----DALPT--KLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95 (190)
Q Consensus 23 ~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (190)
.+++.+++++++|++++++...... ...+. ...++... . +.+... .. .......++++++
T Consensus 118 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~----~~-----~~~~~~~~~d~a~ 184 (631)
T PRK07769 118 VGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD-A---VPDEVG----AT-----WVPPEANEDTIAY 184 (631)
T ss_pred HHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc-c---cccccc----cc-----cCCCCCCCCCeEE
Confidence 5679999999999999988652210 11111 11222211 0 000000 00 0012346789999
Q ss_pred EEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC-CC--ChH
Q psy13808 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-SF--KPM 172 (190)
Q Consensus 96 i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-~~--~~~ 172 (190)
|+|||||||+||||+++|+++..........+++.+ ++++++.+|++|.+|+.. ++.+++.|+++++.++ .+ ++.
T Consensus 185 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~Pl~h~~gl~~-~~~~~~~G~~~~~~~~~~~~~~~~ 262 (631)
T PRK07769 185 LQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQE-GDRGVSWLPFFHDMGLIT-VLLPALLGHYITFMSPAAFVRRPG 262 (631)
T ss_pred EEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCC-cceEEEeCCCcCchhhHH-HHHHHhhCCeEEEEChHHHHhCHH
Confidence 999999999999999999999988777777778877 999999999999999765 5667778999988744 35 899
Q ss_pred HHHHHHHHCCc
Q psy13808 173 DSLRAIAKEKC 183 (190)
Q Consensus 173 ~~~~~i~~~~i 183 (190)
.+++.++++++
T Consensus 263 ~~~~~i~~~~~ 273 (631)
T PRK07769 263 RWIRELARKPG 273 (631)
T ss_pred HHHHHHHhhcc
Confidence 99999999986
No 99
>KOG1180|consensus
Probab=99.78 E-value=6.3e-19 Score=142.45 Aligned_cols=146 Identities=17% Similarity=0.213 Sum_probs=115.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee----------------c--CcccHHHHHh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR----------------M--GTFRLSDIMQ 71 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~----------------~--~~~~~~~l~~ 71 (190)
|-+...+..+.|.|-|++++++.|||+.+.+. ....+.++.+|.++ + ...+|++++.
T Consensus 143 VT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~ 222 (678)
T KOG1180|consen 143 VTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEK 222 (678)
T ss_pred EEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHh
Confidence 34466788999999999999999999998443 34556778887761 1 1356777777
Q ss_pred cCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc-CCcCCCcEEEEeCCchhHHHHHH
Q psy13808 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL-EFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
.+.+...+ +....|+|+|+|+|||||||.|||||++|+|+++......... .+.+ .|+++.++||.|++-+..
T Consensus 223 lG~~~~~~-----~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~-~D~yi~yLPLAHIlEl~a 296 (678)
T KOG1180|consen 223 LGKENEIP-----PHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGP-KDRYIAYLPLAHILELTA 296 (678)
T ss_pred hCCcCCCC-----CCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCC-CceEEEechHHHHHHHHH
Confidence 77655311 2333789999999999999999999999999999888777766 4555 999999999999999888
Q ss_pred HHHHHHHhCCEEEEcCC
Q psy13808 151 GILNAMNHGSTTVVPAP 167 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~ 167 (190)
. +.++..|+++-+.++
T Consensus 297 E-~~~ft~G~~iGY~S~ 312 (678)
T KOG1180|consen 297 E-LVCFTWGGRIGYSSP 312 (678)
T ss_pred H-HHHHhhCCEeecCCc
Confidence 6 567889999887743
No 100
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.78 E-value=5.4e-18 Score=140.78 Aligned_cols=161 Identities=16% Similarity=0.188 Sum_probs=120.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.+++|+.++.+++.++++..+++.++++...... ..... ++... ....+........ ......+++.
T Consensus 77 ~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--~~~~~-~~~~~----~~~~~~~~~~~~~------~~~~~~~~~~ 143 (502)
T TIGR01734 77 YIPVDTSIPSERIEMIIEAAGPELVIHTAELSID--AVGTQ-IITLS----ALEQAETSGGPVS------FDHAVKGDDN 143 (502)
T ss_pred EeCCCCcChHHHHHHHHHhcCCCEEEeccccccc--ccCCc-eEEch----HhhhhhhhcCCcc------ccccCCCCCe
Confidence 3466899999999999999999999998763221 11222 22110 1111111111110 0123467899
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CCh
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FKP 171 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~~ 171 (190)
++++|||||||.||+|+++|+++..+.......++... ++++++..|++|..++ +.++.++..|+++++.++. .++
T Consensus 144 ~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~ 221 (502)
T TIGR01734 144 YYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSE-GKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITNNF 221 (502)
T ss_pred EEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCC-CceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhcCH
Confidence 99999999999999999999999988877777777776 8999999999999885 5588999999999998532 589
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
..+++.++++++|.+.++
T Consensus 222 ~~~~~~i~~~~~~~~~~~ 239 (502)
T TIGR01734 222 KLLFEELPKTGLNVWVST 239 (502)
T ss_pred HHHHHHHHHcCCeEEEEC
Confidence 999999999999998764
No 101
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.78 E-value=4.1e-18 Score=139.10 Aligned_cols=152 Identities=23% Similarity=0.208 Sum_probs=114.3
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEE
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (190)
+++|.++.+++.+++++++++.+++++.... . . +. ...+..+........ ........+++++
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~---~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 115 (436)
T TIGR01923 53 MLNTRLTENERTNQLEDLDVQLLLTDSLLEE-K----D---FQ----ADSLDRIEAAGRYET-----SLSASFNMDQIAT 115 (436)
T ss_pred ecCcCCCHHHHHHHHHhcCCCEEEEcCcccc-c----c---ee----ecchHhhhhcccccc-----cccccCCcCceEE
Confidence 4588889999999999999999988865211 0 0 00 011222211111110 0112346789999
Q ss_pred EEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHH
Q psy13808 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175 (190)
Q Consensus 96 i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~ 175 (190)
++|||||||.||+|+++|+++..........+++.+ +|+++...|++|..++. .++.++..|+++++. +.+ ..++
T Consensus 116 i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~-~~~--~~~~ 190 (436)
T TIGR01923 116 LMFTSGTTGKPKAVPHTFRNHYASAVGSKENLGFTE-DDNWLLSLPLYHISGLS-ILFRWLIEGATLRIV-DKF--NQLL 190 (436)
T ss_pred EEeCCCCCCCCcEEEEehHHHHHHHHHHHhhcCCCC-CceEEEccCcHhHHHHH-HHHHHHhcCceEEec-chH--HHHH
Confidence 999999999999999999999988887778888887 99999999999999864 578999999999998 444 4999
Q ss_pred HHHHHCCceEEecc
Q psy13808 176 RAIAKEKCMEYLTK 189 (190)
Q Consensus 176 ~~i~~~~iT~l~~t 189 (190)
+.++++++|++.++
T Consensus 191 ~~l~~~~~t~~~~~ 204 (436)
T TIGR01923 191 EMIANERVTHISLV 204 (436)
T ss_pred HHHHHhCCeEEEeH
Confidence 99999999998753
No 102
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.78 E-value=5.8e-18 Score=142.78 Aligned_cols=169 Identities=19% Similarity=0.188 Sum_probs=114.5
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CC--------------CCCCcEEEEe--------------ecC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DA--------------LPTKLTRLAL--------------RMG 62 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~--------------~~~~~~~i~~--------------~~~ 62 (190)
+++|.++.+++.++++++++++++++...... .. .+..+.++.. ...
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHLPQ 183 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCCcc
Confidence 66899999999999999999999987542110 00 0111110000 001
Q ss_pred cccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC---------CcCCC
Q psy13808 63 TFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE---------FDKTD 133 (190)
Q Consensus 63 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~---------~~~~~ 133 (190)
...|++++....... .......++++++|+|||||||.||||+++|+++..+.......+. +...+
T Consensus 184 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK12492 184 AVPFKQALRQGRGLS-----LKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQ 258 (562)
T ss_pred cccHHHHHhccCCCC-----CCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCC
Confidence 122333332211110 0112346689999999999999999999999999776554433322 22324
Q ss_pred cEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 134 HKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 134 ~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++++.+|++|.+++.+.++..+..|++.++....+++..+++.++++++|++.++
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 314 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGL 314 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCc
Confidence 67899999999999877778888899988776556799999999999999998753
No 103
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.77 E-value=8.8e-18 Score=141.46 Aligned_cols=169 Identities=18% Similarity=0.196 Sum_probs=115.5
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee----------------------------
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR---------------------------- 60 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~---------------------------- 60 (190)
-|++||.++.+++.++++++++++++++..... ....+ ...++...
T Consensus 103 ~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08751 103 VVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYR 181 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-ccEEEEechhhhcccccchhhhhhhhhhhccccccC
Confidence 355689999999999999999999999865211 01111 12222210
Q ss_pred -cCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC----CcCCCcE
Q psy13808 61 -MGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE----FDKTDHK 135 (190)
Q Consensus 61 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~----~~~~~~~ 135 (190)
.+...+.+.+...... ........++++++++|||||||.||||+++|+++..........++ +.+.+++
T Consensus 182 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 182 INGAIRFREALALGRKH-----SMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCccccHHHHHhccCCC-----CCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 0001122222111100 00112346789999999999999999999999999877665544433 3332467
Q ss_pred EEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 136 ILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 136 ~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
+++..|++|.+++....+.++..|+++++..+.+++..+++.+++|++|++.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 309 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTG 309 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecC
Confidence 88999999999977666777888888877656789999999999999999865
No 104
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.77 E-value=1.8e-17 Score=139.69 Aligned_cols=171 Identities=19% Similarity=0.178 Sum_probs=115.0
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC----CCCCCcEEEEe-ecCcc----------------------
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD----ALPTKLTRLAL-RMGTF---------------------- 64 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~i~~-~~~~~---------------------- 64 (190)
+.-|++||.++.+++.++++.++++.++++....... .......++.. .....
T Consensus 99 ~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (563)
T PRK06710 99 GIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKV 178 (563)
T ss_pred eEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccccc
Confidence 3456779999999999999999999999987522110 00011111111 00000
Q ss_pred -------cHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh-hcCCcCCCcEE
Q psy13808 65 -------RLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK-RLEFDKTDHKI 136 (190)
Q Consensus 65 -------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~-~~~~~~~~~~~ 136 (190)
.|..+....... .......++++++++|||||||.||+|+++|+++..+...... .++....++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (563)
T PRK06710 179 SESETIHLWNSVEKEVNTG------VEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVV 252 (563)
T ss_pred cccchhhhhhhhhhccccc------cccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceE
Confidence 001100000000 0011123578999999999999999999999998765433222 23444336788
Q ss_pred EEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 137 LLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 137 l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++.+|++|.+|+...++.++..|+++++. +.+++..+++.|+++++|++.++
T Consensus 253 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 304 (563)
T PRK06710 253 LGVLPFFHVYGMTAVMNLSIMQGYKMVLI-PKFDMKMVFEAIKKHKVTLFPGA 304 (563)
T ss_pred EEeCchHHHHHHHHHHHHHHHcCCeEEEc-CCCCHHHHHHHHHHcCCeEEecc
Confidence 99999999999776677789999999998 67999999999999999998753
No 105
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.77 E-value=1.4e-17 Score=140.31 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=114.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC----CCCCCCcEEEEee----------------------------cC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA----DALPTKLTRLALR----------------------------MG 62 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~~~~~~~~~i~~~----------------------------~~ 62 (190)
++++|.++.+++.++++.+++++++++...... ........++... .+
T Consensus 101 v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (557)
T PRK07059 101 VNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPG 180 (557)
T ss_pred eccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCCC
Confidence 366899999999999999999999987652110 0011112221110 01
Q ss_pred cccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----CCc--CCCcEE
Q psy13808 63 TFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFD--KTDHKI 136 (190)
Q Consensus 63 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~~~--~~~~~~ 136 (190)
...+++++....... .......++++++|+|||||||.||+|+++|.++..+........ ... .....+
T Consensus 181 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (557)
T PRK07059 181 HVRFNDALAEGARQT-----FKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNF 255 (557)
T ss_pred cccHHHHhhccCCCC-----CCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEE
Confidence 122333332221111 012345678999999999999999999999999987654332221 111 114578
Q ss_pred EEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 137 LLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 137 l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++.+|++|.+++....+.++..|++.++.+...++..+++.++++++|.+.++
T Consensus 256 ~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 308 (557)
T PRK07059 256 VCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAV 308 (557)
T ss_pred EEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecC
Confidence 88999999998776677888889988887556789999999999999998753
No 106
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.77 E-value=1.4e-17 Score=138.18 Aligned_cols=159 Identities=14% Similarity=0.178 Sum_probs=119.0
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEE
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (190)
++++.++.+++.++++..++++++++..... .. .....+ .++++......... ........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 147 (503)
T PRK04813 81 PVDVSSPAERIEMIIEVAKPSLIIATEELPL--EI-LGIPVI-------TLDELKDIFATGNP---YDFDHAVKGDDNYY 147 (503)
T ss_pred cCCCCChHHHHHHHHHhcCCCEEEecccccc--cc-cCCcEE-------ehHHhhhhhhcccc---ccccccCCCCCcEE
Confidence 5689999999999999999999999876311 11 111111 12222211100000 00123456789999
Q ss_pred EEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CChHH
Q psy13808 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FKPMD 173 (190)
Q Consensus 96 i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~~~~ 173 (190)
++|||||||.||+|.++|+++..........+++.. ++++++..|++|..+. +.++.++..|+++++.++. +++..
T Consensus 148 i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~~~~~~~ 225 (503)
T PRK04813 148 IIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPE-GPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDMTANFKQ 225 (503)
T ss_pred EEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCc-CceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhhhcCHHH
Confidence 999999999999999999999988877777778877 8999999999999885 5578899999999998543 58999
Q ss_pred HHHHHHHCCceEEecc
Q psy13808 174 SLRAIAKEKCMEYLTK 189 (190)
Q Consensus 174 ~~~~i~~~~iT~l~~t 189 (190)
+++.++++++|++..+
T Consensus 226 ~~~~~~~~~~t~~~~~ 241 (503)
T PRK04813 226 LFETLPQLPINVWVST 241 (503)
T ss_pred HHHHHHHcCCeEEEeC
Confidence 9999999999998764
No 107
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.76 E-value=1.3e-18 Score=141.24 Aligned_cols=166 Identities=23% Similarity=0.278 Sum_probs=113.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCC----CCCCC---C--CCCCCCCcEEEEee-cCcccHHHHHhcCCCcchhhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNP----RPSAY---K--ADALPTKLTRLALR-MGTFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~----~~~~~---~--~~~~~~~~~~i~~~-~~~~~~~~l~~~~~~~~~~~~~~ 83 (190)
-|+++|.++.+++.++++.+++++|++ +...+ . .........++.+. ......+.+.........
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 147 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSDEP----- 147 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCHCS-----
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccccccc-----
Confidence 345599999999999999999999997 22210 0 11112223333332 111111111111100000
Q ss_pred hhcc-CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhh--hhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 84 ISKS-LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG--KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 84 ~~~~-~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~--~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
... ..++++++++|||||||.||+|+++|+++.+...... ...++ .|++++.+|++|.+|+...++.++..|+
T Consensus 148 -~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~---~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 223 (417)
T PF00501_consen 148 -QSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGL---GDRILSFLPLSHIFGLISALLAALFSGA 223 (417)
T ss_dssp -HSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTT---TTEEEESS-TTSHHHHHHHHHHHHHCTS
T ss_pred -ccCCCCccceeEeecccccccccccccccccccccccccccccccccc---CceEEeeccccccccccccccccccccc
Confidence 000 0579999999999999999999999999998876653 11222 1699999999999998678999999999
Q ss_pred EEEEcCCCCC---hHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFK---PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~---~~~~~~~i~~~~iT~l~~t 189 (190)
+++++ +.+. ++.+++.++++++|++.++
T Consensus 224 ~~~~~-~~~~~~~~~~~~~~i~~~~~t~~~~~ 254 (417)
T PF00501_consen 224 TLVLP-SPFDLFDPESLLELISRYKPTILFAV 254 (417)
T ss_dssp EEEEE-SSHHHHHHHHHHHHHHHHTESEEEEE
T ss_pred ccccc-ccccccccccchhccccccccccccc
Confidence 99999 4443 5778999999999999875
No 108
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.76 E-value=1.2e-17 Score=139.13 Aligned_cols=164 Identities=20% Similarity=0.265 Sum_probs=115.0
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC--CCCCCCcEEEEe-------------------ecCcccHHHHHhc
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA--DALPTKLTRLAL-------------------RMGTFRLSDIMQG 72 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--~~~~~~~~~i~~-------------------~~~~~~~~~l~~~ 72 (190)
-++++|.++.+++.++++.++|++++++...... ...+....++.. .....+++++...
T Consensus 63 ~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (509)
T PRK12406 63 AVPVNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ 142 (509)
T ss_pred EEecCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc
Confidence 3456899999999999999999999988763321 111111111111 0111223333221
Q ss_pred CCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHH---HHHHHhhhhcCCcCCCcEEEEeCCchhHHHHH
Q psy13808 73 AGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLI---NNSNFIGKRLEFDKTDHKILLQVPMFHTFGTA 149 (190)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~---~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 149 (190)
... .....++++++++|||||||.||+|+++|.... .........+++.+ ++++++..|++|..+..
T Consensus 143 ~~~---------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~~~~ 212 (509)
T PRK12406 143 QEP---------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKP-GIRALLTGPLYHSAPNA 212 (509)
T ss_pred cCc---------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCC-CceEEEEeCCcccchHH
Confidence 111 122356899999999999999999998776543 33333445667777 89999999999998866
Q ss_pred HHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 150 MGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 150 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+. +.++..|+++++. +.++++.+++.++++++|.+.++
T Consensus 213 ~~-~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~ 250 (509)
T PRK12406 213 YG-LRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMV 250 (509)
T ss_pred HH-HHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEcc
Confidence 64 5578889999998 67899999999999999998764
No 109
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.76 E-value=6e-18 Score=143.16 Aligned_cols=154 Identities=14% Similarity=0.110 Sum_probs=110.7
Q ss_pred ccchhhhhhccCCCCCCCCCCCCCC--CCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecC
Q psy13808 23 ERTLSHQDKIRPGRESNPRPSAYKA--DALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTS 100 (190)
Q Consensus 23 ~~~l~~~l~~~~~~~i~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 100 (190)
.+++.++++.+++++++++...... ........+.. .++.++........ ......++++++|+|||
T Consensus 117 ~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------~~~~~~~~~~a~i~~TS 185 (579)
T PRK09192 117 IAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV-----LSHAWFKALPEADV------ALPRPTPDDIAYLQYSS 185 (579)
T ss_pred HHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce-----eehhhhcccCCCcc------ccCCCCCCCeEEEEecC
Confidence 5789999999999999988762210 00001111111 12333322211110 01234678999999999
Q ss_pred CCCCCCceeEechHHHHHHHHHhhh-hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC-C--CChHHHHH
Q psy13808 101 GTTGHPKAAFLTHYNLINNSNFIGK-RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-S--FKPMDSLR 176 (190)
Q Consensus 101 GTTG~PKgv~~sh~~~~~~~~~~~~-~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-~--~~~~~~~~ 176 (190)
||||.||||+++|+++......... .+++.+ +|+++..+|++|.+|+...++.++..|+++++.+. . .++..+++
T Consensus 186 GTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~ 264 (579)
T PRK09192 186 GSTRFPRGVIITHRALMANLRAISHDGLKVRP-GDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLD 264 (579)
T ss_pred CCCCCCceEEeeHHHHHHHHHHHHhhcccCCC-CCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHH
Confidence 9999999999999999988776666 678877 99999999999999987777888999999987632 2 37889999
Q ss_pred HHHHCCceEEec
Q psy13808 177 AIAKEKCMEYLT 188 (190)
Q Consensus 177 ~i~~~~iT~l~~ 188 (190)
.++++++|+++.
T Consensus 265 ~i~~~~~t~~~~ 276 (579)
T PRK09192 265 LISRNRGTISYS 276 (579)
T ss_pred HHHhcCcEEEeC
Confidence 999999987654
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.76 E-value=5.5e-18 Score=143.23 Aligned_cols=158 Identities=15% Similarity=0.172 Sum_probs=109.9
Q ss_pred cCCC---CCCccchhhhhhccCCCCCCCCCCCCCCC-----C--CCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhh
Q psy13808 16 GESQ---PFRERTLSHQDKIRPGRESNPRPSAYKAD-----A--LPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 16 ~i~p---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~-----~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
++++ .++.+++.++|++++++++++++...... . ......++... . .++.. .... ..
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~~------~~ 154 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD--L---LDLDS--PRGS------DA 154 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec--c---ccccc--CCcc------cc
Confidence 4465 45788999999999999999987622210 0 00111122110 0 00000 0000 01
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc-C-----CcCCCcEEEEeCCchhHHHHHHHHHHHHHhC
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL-E-----FDKTDHKILLQVPMFHTFGTAMGILNAMNHG 159 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~-----~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G 159 (190)
....++++++|+|||||||.||||+++|+++..++......+ . ... ++++++.+|++|..|+...++.++..|
T Consensus 155 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~pl~h~~g~~~~~~~~l~~G 233 (578)
T PRK05850 155 RPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPP-DTTVVSWLPFYHDMGLVLGVCAPILGG 233 (578)
T ss_pred CCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCC-cceEEEECCCCCCchhHHHHHHHHhcC
Confidence 234678999999999999999999999999987765443322 2 233 789999999999999888889999999
Q ss_pred CEEEEcCCC---CChHHHHHHHHHCCceEEe
Q psy13808 160 STTVVPAPS---FKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 160 ~~vv~~~~~---~~~~~~~~~i~~~~iT~l~ 187 (190)
+++++.++. .++..+++.+++++++.+.
T Consensus 234 ~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~ 264 (578)
T PRK05850 234 CPAVLTSPVAFLQRPARWMQLLASNPHAFSA 264 (578)
T ss_pred CcEEEeCHHHHHHCHHHHHHHHHHcCCeEEe
Confidence 999998432 2799999999999998654
No 111
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.75 E-value=7.3e-18 Score=141.12 Aligned_cols=99 Identities=21% Similarity=0.303 Sum_probs=86.8
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCc-CCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFD-KTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~-~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
..++++++|+|||||||.||||+++|+++.+.+......+++. + +|++++.+|++|.+|+. .++.++..|+++++.+
T Consensus 149 ~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 149 PDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAA-TDVGCSWLPLYHDMGLA-FLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCC-CCeEEEcCCCccCccHH-HHHHHHHcCCeEEEcC
Confidence 4678999999999999999999999999998888777778887 6 99999999999999965 5788999999999984
Q ss_pred C-CC--ChHHHHHHHHHCCceEEec
Q psy13808 167 P-SF--KPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 167 ~-~~--~~~~~~~~i~~~~iT~l~~ 188 (190)
+ .| ++..+++.++++++|.+..
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 2 34 6889999999999997743
No 112
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.74 E-value=1.3e-17 Score=139.12 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=107.9
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCC-cEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTK-LTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
+++|.++.+++.++++.++++.+++++..... +... ..++.+.... ... . .. . .....+++.+
T Consensus 114 pl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~--~~~~~~~~~~~~~~~---~~~-~-~~-~--------~~p~~~~~~~ 177 (516)
T PRK13383 114 PISTEFRSDALAAALRAHHISTVVADNEFAER--IAGADDAVAVIDPAT---AGA-E-ES-G--------GRPAVAAPGR 177 (516)
T ss_pred EcCccCCHHHHHHHHhcCCCCEEEEchhHHHH--HHhhhcceEEeccch---hhh-h-cC-C--------CCCCCCCCCc
Confidence 33899999999999999999999998763211 1111 1122211110 000 0 00 0 0111345667
Q ss_pred EEEecCCCCCCCceeEechHHHHHHH--HHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNS--NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPM 172 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~--~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~ 172 (190)
+++|||||||.||||+++|....... ......+++.+ +|+++..+|++|.+|+.. ++.++..|+++++. ..++++
T Consensus 178 ~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~pl~h~~g~~~-~~~~l~~G~~~~~~-~~~~~~ 254 (516)
T PRK13383 178 IVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRT-GSRISVAMPMFHGLGLGM-LMLTIALGGTVLTH-RHFDAE 254 (516)
T ss_pred EEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCC-CCeEEEecCCcchhhHHH-HHHHHhcCCEEEEC-CCCCHH
Confidence 89999999999999999998432211 12223456666 899999999999999755 67789999999988 689999
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.+++.++++++|.+.++
T Consensus 255 ~~~~~i~~~~~t~~~~~ 271 (516)
T PRK13383 255 AALAQASLHRADAFTAV 271 (516)
T ss_pred HHHHHHHHhCCcEEEec
Confidence 99999999999998753
No 113
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.74 E-value=2.5e-17 Score=136.90 Aligned_cols=163 Identities=13% Similarity=0.107 Sum_probs=107.6
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CCC-CCCcEEEEee---cCcccHHHHHhcCCCcchhhhhhhhccC
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DAL-PTKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQISKSL 88 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~-~~~~~~i~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 88 (190)
-++++|.++++++.+++++++++.++++...... ... ......+... .....+++...... ....
T Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 145 (501)
T PRK13390 76 ITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAGAG----------PRLT 145 (501)
T ss_pred EeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcccC----------CCCC
Confidence 3456999999999999999999999987652110 000 1111112211 11112222221110 0011
Q ss_pred CCCCeEEEEecCCCCCCCceeEe--chHHHHHHHH----HhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFL--THYNLINNSN----FIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~--sh~~~~~~~~----~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
...+.++|+|||||||.||||++ +|+++..... .....+.+.. +++++..+|++|.+++.+. +..+..|+++
T Consensus 146 ~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~ 223 (501)
T PRK13390 146 EQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISE-SDIYYSSAPIYHAAPLRWC-SMVHALGGTV 223 (501)
T ss_pred CCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCC-CCeEEecccchhhhHHHHH-HHHHhcCceE
Confidence 22357999999999999999995 5555543221 1223456666 8999999999999986553 3456789999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.++++.+++.|+++++|++.++
T Consensus 224 ~~~-~~~~~~~~~~~i~~~~~t~~~~~ 249 (501)
T PRK13390 224 VLA-KRFDAQATLGHVERYRITVTQMV 249 (501)
T ss_pred EEc-CCcCHHHHHHHHHHcCCeEEEec
Confidence 988 68999999999999999998753
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.74 E-value=6.9e-17 Score=135.64 Aligned_cols=102 Identities=28% Similarity=0.310 Sum_probs=87.3
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
...++++++|+|||||||.||||+++|+++..........+++....|++++.+|++|..++...+..++..|+++++.+
T Consensus 148 ~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 148 ETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 44679999999999999999999999999998877777777777623899999999999998777788899999999874
Q ss_pred CC---CChHHHHHHHHHCCceEEec
Q psy13808 167 PS---FKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 167 ~~---~~~~~~~~~i~~~~iT~l~~ 188 (190)
+. .++..+++.++++++|++.+
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~ 252 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAA 252 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEEC
Confidence 32 37889999999999998754
No 115
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.74 E-value=4.7e-17 Score=135.66 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=113.4
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec-----CcccHHHHHhcCCCcchhhhhhhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM-----GTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
++++.++.+++.+++++++++.++++..... ....+.....+.... ....+.+.....+. .
T Consensus 78 ~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 148 (511)
T PRK13391 78 CVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPA---------T 148 (511)
T ss_pred ccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCC---------C
Confidence 5689999999999999999999999876322 112233333333311 11122222221110 0
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEe--chHHHHHH---HHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFL--THYNLINN---SNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~--sh~~~~~~---~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
...+.++.++++|||||||.||||++ +|.++... .......+++.. ++++++..|++|..++.. .+.++..|+
T Consensus 149 ~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~h~~~~~~-~~~~~~~g~ 226 (511)
T PRK13391 149 PIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRS-DMVYLSPAPLYHSAPQRA-VMLVIRLGG 226 (511)
T ss_pred CCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCC-CCeEEEcCCHHHHHHHHH-HHHHHHcCc
Confidence 11233467899999999999999995 46665432 233345566766 899999999999988654 677899999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. +.++++.+++.++++++|++.++
T Consensus 227 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 254 (511)
T PRK13391 227 TVIVM-EHFDAEQYLALIEEYGVTHTQLV 254 (511)
T ss_pred eEEEC-CCCCHHHHHHHHHHhCCeEEEeh
Confidence 99998 67999999999999999998764
No 116
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.73 E-value=5.3e-17 Score=134.96 Aligned_cols=164 Identities=16% Similarity=0.152 Sum_probs=113.7
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCC-CCcEEEEee---cCcccHHHHHhcCCCcchhhhhhh
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALP-TKLTRLALR---MGTFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~-~~~~~i~~~---~~~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
.++++|.++.+++.++++.+++++++++...... ...+ ....++..+ .....+++.......
T Consensus 63 ~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 133 (502)
T PRK08276 63 YTPINWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPD--------- 133 (502)
T ss_pred EEecccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCC---------
Confidence 3455888999999999999999999998763221 1122 233333321 122334444332111
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHH------HHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHh
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS------NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNH 158 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~------~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~ 158 (190)
......++.++++|||||||.||+|+++|+++.... ........... ++++++..|++|..++.+ .+.++..
T Consensus 134 ~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~~~~~-~~~~~~~ 211 (502)
T PRK08276 134 TPIADETAGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGP-DSVYLSPAPLYHTAPLRF-GMSALAL 211 (502)
T ss_pred CCCCCCCcceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCC-CCEEEEcCcHHHHHHHHH-HHHHHhc
Confidence 112345678999999999999999999987654321 11122222334 889999999999999766 4578999
Q ss_pred CCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 159 GSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 159 G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
|+++++. +.+++..+++.++++++|++.++
T Consensus 212 g~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 241 (502)
T PRK08276 212 GGTVVVM-EKFDAEEALALIERYRVTHSQLV 241 (502)
T ss_pred cceEEEc-CCCCHHHHHHHHHHhCCeEEEeh
Confidence 9999998 67999999999999999998753
No 117
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.73 E-value=1.2e-16 Score=134.67 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=113.4
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC----CCCCCCcEEEEee--c---------------------------
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA----DALPTKLTRLALR--M--------------------------- 61 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~----~~~~~~~~~i~~~--~--------------------------- 61 (190)
|+++|.++.+++.++++.++++.++++++.... ........++... .
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLP 181 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCC
Confidence 456899999999999999999999987652210 0001112222110 0
Q ss_pred CcccHHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC--CcCCCcEEEEe
Q psy13808 62 GTFRLSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE--FDKTDHKILLQ 139 (190)
Q Consensus 62 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~~~~l~~ 139 (190)
....+.+......... .......++++++++|||||||.||+|+++|+++..+.......+. ....++.++..
T Consensus 182 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08974 182 DAISFRSALHKGRRMQ-----YVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTA 256 (560)
T ss_pred CcccHHHHhhccCCCC-----CCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEe
Confidence 0001111111100000 0012246789999999999999999999999999876554333221 12226788999
Q ss_pred CCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 140 VPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 140 ~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
+|++|.+++....+..+..|+++++..+..++..+++.+++|++|.+.+
T Consensus 257 ~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 305 (560)
T PRK08974 257 LPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITG 305 (560)
T ss_pred CcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcC
Confidence 9999999987777788889999887655678999999999999999865
No 118
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.73 E-value=4.6e-17 Score=134.01 Aligned_cols=142 Identities=18% Similarity=0.143 Sum_probs=103.2
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeEE
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGIN 95 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (190)
+++|.++++++.++++.++++.++++.+.... ....... +. ..... ......++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~--------~~-----~~~~~------~~~~~~~~~~a~ 139 (458)
T PRK09029 82 PLNPQLPQPLLEELLPSLTLDFALVLEGENTF---SALTSLH--------LQ-----LVEGA------HAVAWQPQRLAT 139 (458)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCcccch---hhccccc--------cc-----ccccc------CcccCCCCCeEE
Confidence 55788888888888888888888877653211 1111000 00 00000 012346789999
Q ss_pred EEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHH
Q psy13808 96 IQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSL 175 (190)
Q Consensus 96 i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~ 175 (190)
++|||||||.||||+++|+++..........+++.+ +|+++..+|++|.+|+.. ++.++..|+++++.+ . ..++
T Consensus 140 i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~h~~g~~~-~~~~l~~G~~v~~~~-~---~~~~ 213 (458)
T PRK09029 140 MTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTA-QDSWLLSLPLFHVSGQGI-VWRWLYAGATLVVRD-K---QPLE 213 (458)
T ss_pred EEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCc-cceEEEecCcHhhhhhHH-HHHHHhCCceEEeCC-h---HHHH
Confidence 999999999999999999999998887777788887 999999999999999654 677899999999983 2 5567
Q ss_pred HHHHHCCceEEe
Q psy13808 176 RAIAKEKCMEYL 187 (190)
Q Consensus 176 ~~i~~~~iT~l~ 187 (190)
+.++ ++|.+.
T Consensus 214 ~~i~--~~t~~~ 223 (458)
T PRK09029 214 QALA--GCTHAS 223 (458)
T ss_pred HHHh--hceeee
Confidence 7774 566543
No 119
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.72 E-value=5.1e-17 Score=144.87 Aligned_cols=163 Identities=15% Similarity=0.102 Sum_probs=104.7
Q ss_pred ccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCc------ccHHHHHhc---CCCcchhhhhhhhccCCCCCe
Q psy13808 23 ERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGT------FRLSDIMQG---AGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 23 ~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.+++.+++++++++++|++++.+.... .....++++..+. ......... .................++|+
T Consensus 530 ~~~l~~il~~s~~~~li~~~~~~~~~~-~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~ 608 (994)
T PRK07868 530 DTDLAAAVRLGGVTEIITDPTNLEAAR-QLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDL 608 (994)
T ss_pred chhHHHHHhccCCeEEEEChHHHHHHH-hcCceEEEecCCccccccCCcchhhhhhhhcCcccccCCcccCCCCCCCCcc
Confidence 478999999999999999866332111 0113333331110 000011100 000000000000112236899
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHH
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMD 173 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~ 173 (190)
++|+|| ||||.||++.++|.+...........+++.+ +|++++.+|++|.+++...++.++..|+++++. ++++++.
T Consensus 609 a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~-~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~-~~~~~~~ 685 (994)
T PRK07868 609 AFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDR-RDTVYCLTPLHHESGLLVSLGGAVVGGSRIALS-RGLDPDR 685 (994)
T ss_pred EEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCC-CCeEEEecChHHHhHHHHHHHHHhccceEEEec-CCCCHHH
Confidence 999999 5888888888888776654444455667777 999999999999999766566666667777666 6899999
Q ss_pred HHHHHHHCCceEEecc
Q psy13808 174 SLRAIAKEKCMEYLTK 189 (190)
Q Consensus 174 ~~~~i~~~~iT~l~~t 189 (190)
+++.|++|+||+++++
T Consensus 686 ~~~~I~~~~vT~~~~~ 701 (994)
T PRK07868 686 FVQEVRQYGVTVVSYT 701 (994)
T ss_pred HHHHHHHhCCcEEEeH
Confidence 9999999999999764
No 120
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.69 E-value=3.2e-16 Score=126.57 Aligned_cols=97 Identities=19% Similarity=0.166 Sum_probs=80.9
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCC-CcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKT-DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~-~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
..++.++++|||||||.||||+++|+++.+........+++... .+++++.+|++|.+|+.+.++.++..|+++++. +
T Consensus 93 ~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~-~ 171 (386)
T TIGR02372 93 STPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQL-A 171 (386)
T ss_pred CCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEec-C
Confidence 33568899999999999999999999999888777776666541 468999999999999877788899999999998 6
Q ss_pred CCChHHHHHHHHHCCceEEec
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~ 188 (190)
++++..+++.++.+ |++++
T Consensus 172 ~~~~~~~l~~i~~~--t~~~~ 190 (386)
T TIGR02372 172 AAPASGIMRHARPG--DLIVG 190 (386)
T ss_pred CCChHHHHHhhccC--CEEEE
Confidence 79999999988765 55543
No 121
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=4.7e-17 Score=127.43 Aligned_cols=164 Identities=17% Similarity=0.128 Sum_probs=130.4
Q ss_pred CCCCCccchhhhhhccCCCCCCCCCCCC----------CCCCCCCCcEEEEeecCc-c-cHHHHHhcCCCcchhhhhhhh
Q psy13808 18 SQPFRERTLSHQDKIRPGRESNPRPSAY----------KADALPTKLTRLALRMGT-F-RLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 18 ~p~~~~~~l~~~l~~~~~~~i~~~~~~~----------~~~~~~~~~~~i~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~ 85 (190)
-|.++..||.+..+.+.|+.++.+.... ...+.+.++++++..+.. . ..+..+........ +.
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~~-----~a 183 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLFT-----PA 183 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccCC-----cC
Confidence 5788999999999999999999888711 134567788877762222 1 12222222221111 12
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEEEE
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTTVV 164 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~vv~ 164 (190)
...+++++++++-+.||||.||.+..+|..+..+.......++++. .+++||.+|..|.+.+.+ +.++.++.|+++|+
T Consensus 184 ~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~-~tvyL~~LP~AHNfplssPG~LGv~~agG~VVl 262 (542)
T COG1021 184 PPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQ-QTVYLCALPAAHNFPLSSPGALGVFLAGGTVVL 262 (542)
T ss_pred CCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCc-cceEEEecccccCCCCCCcchhheeeeccEEEE
Confidence 3457788999999999999999999999999999999999999998 999999999999988653 78899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
. ++.+|+..+.+|++|+||+...
T Consensus 263 a-~~psp~~~F~lIerh~Vt~tAL 285 (542)
T COG1021 263 A-PDPSPELCFPLIERHGVTVTAL 285 (542)
T ss_pred C-CCCCHHHHHHHHHHhccceEEe
Confidence 8 8899999999999999998754
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.62 E-value=7.5e-15 Score=117.35 Aligned_cols=92 Identities=30% Similarity=0.351 Sum_probs=77.0
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE--c
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV--P 165 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~--~ 165 (190)
..++|+++|+|||||||.||||+++|+++..+.......+ .. .++++..+|++|..|+.. ++.++..|++.++ .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~-~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GG-PGQWLLALPAHHIAGLQV-LVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CC-CCeEEEECChHHHHHHHH-HHHHHHcCCeEEecCc
Confidence 3568999999999999999999999999988776554433 33 678999999999999654 6788899999888 3
Q ss_pred CCCCChHHHHHHHHHCCc
Q psy13808 166 APSFKPMDSLRAIAKEKC 183 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~i 183 (190)
+..+++..+++.+++++.
T Consensus 108 ~~~~~~~~~~~~i~~~~~ 125 (358)
T PRK07824 108 SAGFDPTALPRAVAELGG 125 (358)
T ss_pred CCCcCHHHHHHHHHHhCC
Confidence 356899999999999984
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=3.6e-14 Score=121.54 Aligned_cols=161 Identities=19% Similarity=0.175 Sum_probs=119.8
Q ss_pred ccccccCCCCCCccchhhhhhccCCCCCCCCCCCCC-CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 11 KEDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYK-ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 11 ~~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
.+-.||++|.++.+.+.+++++++++.++++..... ...++. +....... . .....+. .....
T Consensus 301 G~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~----~~~~~~~------~~~~~ 364 (642)
T COG1020 301 GAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG----LALDDALS--E----IPDTDPI------PQALL 364 (642)
T ss_pred CCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc----cccccccc--c----CCccCcc------cccCC
Confidence 455689999999999999999999999999833111 111121 11100000 0 0000000 12346
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-- 167 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-- 167 (190)
+++.+|++|||||||.||||+++|+++.+........+.+.. +|+++...++.+... .+.++.++..|+++++.++
T Consensus 365 ~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~-~d~~l~~~s~~fD~~-~~~~f~~l~~G~~l~~~~~~~ 442 (642)
T COG1020 365 GDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDA-DDRVLALASLSFDAS-VFEIFGALLEGARLVLAPALL 442 (642)
T ss_pred CCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCc-ccEEeecCCcccchh-HHHHHHHHhCCCEEEecCccc
Confidence 689999999999999999999999999997666766788887 889999999877665 7789999999999999854
Q ss_pred CCChHHHHHHHHHCCceEEecc
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+++.+.+.++++++|.+..+
T Consensus 443 ~~~~~~l~~~~~~~~vt~~~~~ 464 (642)
T COG1020 443 QVDPAALLELLEAQGITVLLLV 464 (642)
T ss_pred cCCHHHHHHHHHHcCCEEEEec
Confidence 3699999999999999998743
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.45 E-value=6.9e-13 Score=108.45 Aligned_cols=100 Identities=17% Similarity=0.033 Sum_probs=77.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHh---hhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI---GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~---~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++++++.++|||||||.||++.++|+++..+.... ...+++.+ +|++++..++.+..+.....+..+..|++++.
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRP-GDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCC-CcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 355678899999999999999999999987653322 23457777 89998877665544434445667889999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
. +..+++.+++.|+++++|+++++
T Consensus 151 ~-~~~~~~~~~~~i~~~~~t~l~~~ 174 (422)
T TIGR02155 151 I-SGGQTEKQVQLIQDFKPDIIMVT 174 (422)
T ss_pred c-CCCCHHHHHHHHHHHCCCEEEEc
Confidence 8 45678999999999999998764
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.32 E-value=1.5e-11 Score=101.40 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=76.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
++.++++.+.|||||||.||++.++|.++..+...... ..++.+ +|+++...|+.+..+.....++++..|++++.
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~-gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTA-GDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCC-CCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 45678899999999999999999999998876544433 347777 89999999988876654445667888988765
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
. + .....++.|+++++|.+.++
T Consensus 162 ~-~--~~~~~~~~i~~~~~t~l~~~ 183 (445)
T TIGR03335 162 E-G--KCTFPIRIIESYRPTGIVAS 183 (445)
T ss_pred C-C--chhHHHHHHHHhCCCEEEEC
Confidence 4 3 23567899999999998753
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=98.31 E-value=6.3e-06 Score=66.99 Aligned_cols=101 Identities=17% Similarity=0.081 Sum_probs=71.7
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
.+.-++...|--||||||+|+-+.++...+..+....++.+ +... +|++....-+.-..|......++...|++++
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~-gd~v~~~~~yGl~tgg~~~~~ga~rig~~vi 164 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRK-GDKVQNAYGYGLFTGGLGLHYGAERIGATVI 164 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCC-CCEEEEEeeeccccCCchhHHHHHhhCEEEE
Confidence 45556777799999999999999999998887776555443 5555 6665544443222222222455666788777
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
-. ..-+-+.-+++++.+++|++.+|
T Consensus 165 p~-~~g~~~~~~~l~~df~~tvI~~t 189 (438)
T COG1541 165 PI-SGGNTERQLELMKDFKPTVIAAT 189 (438)
T ss_pred cc-CCccHHHHHHHHHhcCCcEEEEC
Confidence 66 34688999999999999999876
No 127
>KOG1178|consensus
Probab=97.94 E-value=1.7e-05 Score=70.63 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=69.1
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCc--hhHHHHHHHHHHHHHhCCEEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPM--FHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl--~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..-++..+++.||||+||.||+|.-+|..+.+...+....+..+. .+++ ...+. ++..- ...+.+.+..|+.+..
T Consensus 192 ~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~-s~~~-~~~~~~~~~d~i-~~~~~~~L~~~~~l~~ 268 (1032)
T KOG1178|consen 192 VGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTG-SDRF-TFKTSVYFDDTI-QKFIGALLFNGNNLLV 268 (1032)
T ss_pred eecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCc-cchh-hhhheeecccch-HHHHhhHhhcCceeec
Confidence 456678899999999999999999999999998887777666665 5553 22222 23222 2223444455554554
Q ss_pred cCCC--CChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPS--FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~--~~~~~~~~~i~~~~iT~l~~t 189 (190)
+... -.+.++.+.+++|+++..+.+
T Consensus 269 p~~~~~~~~~~l~~~le~y~i~~~~~~ 295 (1032)
T KOG1178|consen 269 PTATIKDTPGQLASTLERYGITVSHLL 295 (1032)
T ss_pred ccccCccchhhHHHHHHhhhheeeeec
Confidence 4222 237999999999999988754
No 128
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=96.04 E-value=0.059 Score=44.59 Aligned_cols=90 Identities=11% Similarity=0.037 Sum_probs=51.7
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHH-hhh--hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE-EEEcCCC
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNF-IGK--RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST-TVVPAPS 168 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~-~~~--~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~-vv~~~~~ 168 (190)
-..+..||||||.|-.+.++......+... ... ..++.. ++++...+ +..+..+ ..+..... +-..+-.
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~-g~r~a~~~---~~~~~ly---~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFA-KHRIAFFL---RADNNLY---QSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCcccccc-CCcEEEEE---ccChhHH---HHHHhccceeeecCCC
Confidence 456778999999999999999865433221 122 224444 44444332 1111122 22222211 2222112
Q ss_pred CChHHHHHHHHHCCceEEecc
Q psy13808 169 FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~t 189 (190)
-+.+..++.|++++++++.+.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~ 194 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAP 194 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEc
Confidence 578899999999999999763
No 129
>KOG3628|consensus
Probab=95.82 E-value=0.058 Score=48.77 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=82.0
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
....++.+|++=|.--++|+--|+..+|.++.+.+......+.+.+ ...++...+.+-..|+....+...+.|.+.++.
T Consensus 938 g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~-~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li 1016 (1363)
T KOG3628|consen 938 GLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYK-SRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLI 1016 (1363)
T ss_pred cccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHcccc-CCceEEEecCccchhHHHHHHHHHHcCCceeec
Confidence 3456688999988877999999999999999999998888888887 555666666666677776688889999998887
Q ss_pred CCC---CChHHHHHHHHHCCceEEec
Q psy13808 166 APS---FKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 166 ~~~---~~~~~~~~~i~~~~iT~l~~ 188 (190)
++- -+|..++..|++|+|.-.+.
T Consensus 1017 ~p~~l~nnpsLll~~i~~~kvkDt~~ 1042 (1363)
T KOG3628|consen 1017 SPMDLENNPSLLLQIISQYKVKDTYP 1042 (1363)
T ss_pred CHHHhhcCHHHHHHHHhcccccccch
Confidence 542 48899999999999875543
No 130
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=93.79 E-value=1 Score=36.47 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=67.1
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++. =....+|...+...+...+. .+++.. ++++....|-.-. ++..+++.+..|+..+
T Consensus 6 ~~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~-~~~V~i~~~n~~~--~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 6 QRYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKK-GDRVAILLPNSIE--FVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSST-TSEEEEEESSSHH--HHHHHHHHHHTT-EEE
T ss_pred hhCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCc-cccccccCCccce--eeeeeccccccccccc
Confidence 34778888766 23456888888776655443 446766 7877777665433 3445788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEec
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..++....+.+.+.+++.++.+++.
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccccceeEEEE
Confidence 9988899999999999999999984
No 131
>KOG3628|consensus
Probab=93.60 E-value=0.13 Score=46.68 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=73.8
Q ss_pred eEEEEecCCCCCCCceeEechHHHHHHHHH---------------h-----hhhcCCcCCCcEEEEeCCchhHHHHHHHH
Q psy13808 93 GINIQFTSGTTGHPKAAFLTHYNLINNSNF---------------I-----GKRLEFDKTDHKILLQVPMFHTFGTAMGI 152 (190)
Q Consensus 93 ~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~---------------~-----~~~~~~~~~~~~~l~~~pl~h~~g~~~~~ 152 (190)
..+|-||++.+|.--|++.+|+ +....+. + ...++... ++..+......-..|+++++
T Consensus 252 ~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~s~~lGlilGV 329 (1363)
T KOG3628|consen 252 YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPS-EDVLLTNLDPSQQLGLILGV 329 (1363)
T ss_pred eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCc-ccceeeccCcccccchhhhh
Confidence 7899999999999999999997 3221111 1 12223344 78888888888899999999
Q ss_pred HHHHHhCCEEEEcCCC--CChHHHHHHHHHCCceEEec
Q psy13808 153 LNAMNHGSTTVVPAPS--FKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 153 ~~~l~~G~~vv~~~~~--~~~~~~~~~i~~~~iT~l~~ 188 (190)
+.++..|.|.+.+++. +.|..+...+-+||++++..
T Consensus 330 ~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~lt 367 (1363)
T KOG3628|consen 330 LVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLT 367 (1363)
T ss_pred hhhhhcCceeecCchhhcCCCcchhhhhccceeEEEee
Confidence 9999999999999443 68889999999999998764
No 132
>PLN03052 acetate--CoA ligase; Provisional
Probab=93.23 E-value=2.9 Score=37.20 Aligned_cols=98 Identities=21% Similarity=0.229 Sum_probs=71.3
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++.-..+..|.+ ...+|.+.+......++. ..++.+ +|++...+|-.--+ +..+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-GdrVai~~pn~~e~--via~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEK-GDAIAIDMPMNVHA--VIIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHHH--HHHHHHHHHcCCEEEee
Confidence 467777654333222222 245788888766655544 347776 99999999865443 44578899999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...+++-++.++++.|
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d 288 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQD 288 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcC
Confidence 8899999999999999999988765
No 133
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=93.23 E-value=2.5 Score=36.70 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=71.4
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.... . ......+|.+.+......++.. .++.+ +|++...+|-.-. .+..+++.+..|+..+.
T Consensus 79 ~~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~ 152 (637)
T PRK00174 79 TRGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKK-GDRVAIYMPMIPE--AAVAMLACARIGAVHSV 152 (637)
T ss_pred cCCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEEEe
Confidence 3577887664221 1 1134568999988776655544 36766 8999888886544 34457889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
..+.+.++.+...+++.++..++..|
T Consensus 153 l~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 153 VFGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 88889999999999999999988654
No 134
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=93.05 E-value=2.8 Score=36.20 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=71.0
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.... .+| ..-.+|.+.+......++. ..++.+ +|++...+|-.-.. +..+++.+..|+..+.
T Consensus 69 ~~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~ 142 (625)
T TIGR02188 69 ARPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKK-GDRVAIYMPMIPEA--AIAMLACARIGAIHSV 142 (625)
T ss_pred cCCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHhCCEEec
Confidence 3667777664322 122 2456888888776655544 347776 89999888865443 4457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
..+.+.++.+...++..++..+++.|
T Consensus 143 i~~~~~~~~l~~~l~~~~~~~li~~~ 168 (625)
T TIGR02188 143 VFGGFSAEALADRINDAGAKLVITAD 168 (625)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 87889999999999999999988754
No 135
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=92.70 E-value=3.7 Score=35.88 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=70.4
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++.-.-+ .+ ....+|.+.+......++. ..++.+ +|++...+|-.--. +..+++++..|+..+..
T Consensus 74 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl 147 (647)
T PTZ00237 74 KRDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISK-NDNVLIYMANTLEP--LIAMLSCARIGATHCVL 147 (647)
T ss_pred CCCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHhCcEEEee
Confidence 3566665442221 11 2356899988876665554 347877 99999999876543 44478899999999888
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...+++.++.+++..|
T Consensus 148 ~~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 148 FDGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcc
Confidence 7899999999999999999988753
No 136
>PRK09274 peptide synthase; Provisional
Probab=92.53 E-value=2.7 Score=35.60 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=68.2
Q ss_pred CCCCeEEEEecCCCC-CCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTT-GHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTT-G~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++....++. +..+-..+|.+.+.......+.. .++.+ +|++...++-...+ +..+++.+..|+..+.
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~-gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGR-GMRAVLMVTPSLEF--FALTFALFKAGAVPVL 95 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCcHHH--HHHHHHHHHcCeEEEE
Confidence 567777654333221 22233368888887766555443 46776 89988888765443 4447889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.+..+++...+++.++..++.
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~ 119 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIG 119 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEe
Confidence 877889999999999999988765
No 137
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=92.43 E-value=4 Score=35.58 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=69.4
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++.... .| ....+|.+.+......++.. .++.+ +|++...+|-.-.. +..+++.+..|+..+..
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l 169 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGP-GDRVAAYLPNIPET--VVAMLATASLGAIWSSC 169 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHHH--HHHHHHHHHcCcEEEee
Confidence 456777654322 12 13468888888766555443 46776 89999988865443 44478999999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...++..++..+++.|
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 170 SPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 7889999999999999999887654
No 138
>PLN02654 acetate-CoA ligase
Probab=92.39 E-value=4.3 Score=35.60 Aligned_cols=96 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++ +...-.| ....+|.+.+......++. ..++.+ +|++...+|-.-- .+..+++++..|+..+..
T Consensus 102 ~~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv 175 (666)
T PLN02654 102 NGDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKK-GDAVVIYLPMLME--LPIAMLACARIGAVHSVV 175 (666)
T ss_pred CCCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEEEec
Confidence 46777755 4221111 2356899888876665554 347776 9999988886544 345578899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...++..++..+++.|
T Consensus 176 ~~~~~~~~l~~~l~~~~~~~li~~~ 200 (666)
T PLN02654 176 FAGFSAESLAQRIVDCKPKVVITCN 200 (666)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcC
Confidence 8899999999999999999988754
No 139
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=92.02 E-value=5.1 Score=34.76 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=70.1
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. -+..+|. .-.+|.+.+......++.. .++.+ +|++...+|-.-- .+..+++.+..|+..+..
T Consensus 65 ~p~~~Al~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALVT-VSSETGQ--ERTLTYRQLHREVNVFASALRALGVGR-GDRVLIYMPMIAE--AVFAMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHhCCEEEec
Confidence 567777554 3222232 2458888887766555443 47777 9999998886543 345578899999999888
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...++..++..++..|
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECC
Confidence 7889999999999999999888754
No 140
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=91.46 E-value=4.7 Score=34.18 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=69.4
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++..-. +.++.-.+|...+......++.. .++.+ ++++...+|-.... ...+++.+..|+..+.
T Consensus 36 ~~p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~-g~~Val~~~n~~e~--~~~~la~~~~G~~~vp 109 (547)
T PRK13295 36 SCPDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGR-GDVVSCQLPNWWEF--TVLYLACSRIGAVLNP 109 (547)
T ss_pred HCCCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCChHH--HHHHHHHHhcCcEEec
Confidence 3567777654332 23344578888887766555443 47776 88888887755443 4447889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+....+.+...++..++..++..
T Consensus 110 l~~~~~~~~l~~~l~~~~~~~li~~ 134 (547)
T PRK13295 110 LMPIFRERELSFMLKHAESKVLVVP 134 (547)
T ss_pred cccccCHHHHHHHHHhcCceEEEEe
Confidence 8788899999999999999988754
No 141
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=91.43 E-value=5.9 Score=34.64 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=69.0
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
+++++++.... +|. ...+|.+.+......++.. .++.+ +|++...+|-.--. +..+++++..|+..+...
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~ 170 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRP-GDRVSGYLPNIPQA--VVAMLATASVGAIWSSCS 170 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecC
Confidence 45666544322 222 2458888888766655543 47776 99999999876443 444788999999999888
Q ss_pred CCCChHHHHHHHHHCCceEEeccC
Q psy13808 167 PSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 167 ~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
+.+.++.+...+++.++..+++.|
T Consensus 171 ~~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 171 PDFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 889999999999999999888654
No 142
>PRK05857 acyl-CoA synthetase; Validated
Probab=91.05 E-value=4.3 Score=34.39 Aligned_cols=92 Identities=10% Similarity=0.022 Sum_probs=67.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.. .| ...+|.+.+.......+.. .++.+ ++++...++-.... +..+++.+..|+..+.
T Consensus 26 ~~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~-g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~ 95 (540)
T PRK05857 26 QQPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSR-GSRVLVISDNGPET--YLSVLACAKLGAIAVM 95 (540)
T ss_pred hCCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcCCCHHH--HHHHHHHHHcCeEEEe
Confidence 46777776533 22 1358998888776665543 36666 88888888766553 4447889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+.++++.+.++..++..++..
T Consensus 96 l~~~~~~~~l~~~~~~~~~~~ii~~ 120 (540)
T PRK05857 96 ADGNLPIAAIERFCQITDPAAALVA 120 (540)
T ss_pred cCccCCHHHHHHHHHhcCCceEEEe
Confidence 8788999999999999988877654
No 143
>PRK09088 acyl-CoA synthetase; Validated
Probab=90.64 E-value=6.4 Score=32.69 Aligned_cols=91 Identities=8% Similarity=-0.083 Sum_probs=66.3
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++....| ..+|...+.......+. ..++.. ++++...++-.... +..+++.+..|+..+..
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~-~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVD-GERLAVLARNSVWL--VALHFACARVGAIYVPL 77 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHcCeEEEee
Confidence 5666665433333 35788888766654443 346666 88888887766553 44478899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+...++.+...+++.+++.++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~ 101 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGD 101 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEc
Confidence 788899999999999999988764
No 144
>PRK08315 AMP-binding domain protein; Validated
Probab=90.60 E-value=5.3 Score=33.84 Aligned_cols=91 Identities=11% Similarity=0.133 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++.... ...+|.+.+.......+.. .++.+ ++++....|-... ++..+++.+..|+..+..
T Consensus 29 ~~~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gi~~-g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l 98 (559)
T PRK08315 29 YPDREALVYRDQ-------GLRWTYREFNEEVDALAKGLLALGIEK-GDRVGIWAPNVPE--WVLTQFATAKIGAILVTI 98 (559)
T ss_pred CCCCeEEEEcCC-------CeEEcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChH--HHHHHHHHHHhCeEEEec
Confidence 566666554322 2347998887766555443 36666 8888877775543 344578999999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++....+.+...+++.+++.++..
T Consensus 99 ~~~~~~~~~~~~l~~~~~~~ii~~ 122 (559)
T PRK08315 99 NPAYRLSELEYALNQSGCKALIAA 122 (559)
T ss_pred CccCCHHHHHHHHHhcCCCEEEEe
Confidence 788899999999999999988764
No 145
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=90.59 E-value=4.7 Score=34.12 Aligned_cols=91 Identities=13% Similarity=0.179 Sum_probs=67.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|++++++. .. | ..+|.+.+.......+.. .++.+ +|++...+|-.-. ++..+++++..|+.++.
T Consensus 35 ~~pd~~a~~~-~~---~----~~~Ty~~l~~~v~~la~~l~~~G~~~-gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 103 (547)
T PRK06087 35 AMPDKIAVVD-NH---G----ASYTYSALDHAASRLANWLLAKGIEP-GDRVAFQLPGWCE--FTIIYLACLKVGAVSVP 103 (547)
T ss_pred HCCCceEEEc-CC---C----CEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCcEEec
Confidence 4677777653 22 2 357888887666555443 46776 8998888875543 34557899999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+..+++...++..++.+++..
T Consensus 104 l~~~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 104 LLPSWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred cchhcCHHHHHHHHHhcCCeEEEEe
Confidence 8778899999999999999888764
No 146
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=90.52 E-value=4.8 Score=33.51 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=65.0
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. . +-.+|...+.......+.. .++.+ ++++....|-.-. .+..+++.+..|+..+..
T Consensus 18 ~~~~~a~~~--~-------~~~~Ty~~l~~~~~~~a~~L~~~gv~~-g~~V~l~~~~~~~--~~~~~la~~~~G~~~v~l 85 (513)
T PRK07656 18 FGDKEAYVF--G-------DQRLTYAELNARVRRAAAALAALGIGK-GDRVAIWAPNSPH--WVIAALGALKAGAVVVPL 85 (513)
T ss_pred CCCCeEEEe--C-------CCceeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChH--HHHHHHHHHhcCeEEEec
Confidence 566776654 1 2358888887766554433 46666 8888877775533 344578899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++....+.+.+.+++.++..++..
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~ii~~ 109 (513)
T PRK07656 86 NTRYTADEAAYILARGDAKALFVL 109 (513)
T ss_pred CcccCHHHHHHHHhhcCceEEEEc
Confidence 788899999999999999988764
No 147
>PLN03102 acyl-activating enzyme; Provisional
Probab=90.18 E-value=4.9 Score=34.48 Aligned_cols=90 Identities=8% Similarity=-0.050 Sum_probs=66.8
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. .+ -.+|.+.+...+...+.. +++.+ +|++...+|-.- .+...+++.+..|+.++.
T Consensus 26 ~~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~-gd~Vai~~~n~~--e~~~~~la~~~~G~~~vp 93 (579)
T PLN03102 26 CYPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITK-NDVVSVLAPNTP--AMYEMHFAVPMAGAVLNP 93 (579)
T ss_pred hCCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcH--HHHHHHHHHHhcCcEEee
Confidence 3577777553 11 257888888766655543 47777 888888887433 334557889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++.+...+++.++..++..
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (579)
T PLN03102 94 INTRLDATSIAAILRHAKPKILFVD 118 (579)
T ss_pred ccccCCHHHHHHHHhccCCeEEEEC
Confidence 8788999999999999999988753
No 148
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=90.00 E-value=8.1 Score=33.44 Aligned_cols=96 Identities=19% Similarity=0.201 Sum_probs=69.5
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. -+..+|. .-.+|.+.+.......+. ..++.+ +|++...+|-.--. +..+++.+..|+..+..
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQR-GDRVLIYMPMIAEA--AFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHhCcEEEee
Confidence 567777654 3322222 345788888766655443 347776 99999988865443 44478899999998888
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++.+...++..++..++.+|
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 7889999999999999999988654
No 149
>PLN02246 4-coumarate--CoA ligase
Probab=89.93 E-value=5.6 Score=33.60 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++..- ++-.+|++.+.......+.. .++.+ +|++...++-.- .....+++.+..|+..+..
T Consensus 36 ~~~~~a~~~~~-------~~~~~ty~el~~~~~~la~~L~~~g~~~-gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l 105 (537)
T PLN02246 36 FSDRPCLIDGA-------TGRVYTYADVELLSRRVAAGLHKLGIRQ-GDVVMLLLPNCP--EFVLAFLGASRRGAVTTTA 105 (537)
T ss_pred CCCCeEEEecC-------CCceeeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCCh--HHHHHHHHHHHcCEEEecC
Confidence 56777755321 12368998887766555443 46766 888887776543 2344478889999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+..+++...+++.++..++..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~li~~ 129 (537)
T PLN02246 106 NPFYTPAEIAKQAKASGAKLIITQ 129 (537)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEc
Confidence 788899999999999999987754
No 150
>PRK12583 acyl-CoA synthetase; Provisional
Probab=89.63 E-value=8.7 Score=32.50 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=66.4
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|++++++..-. +..+|...+......++.. .++.+ ++++....|-.-. +...+++.+..|+..+.
T Consensus 30 ~~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gi~~-g~~V~i~~~~~~~--~~~~~~a~~~~G~~~v~ 99 (558)
T PRK12583 30 RFPDREALVVRHQ-------ALRYTWRQLADAVDRLARGLLALGVQP-GDRVGIWAPNCAE--WLLTQFATARIGAILVN 99 (558)
T ss_pred HCCCCeEEEecCC-------CcEecHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCChH--HHHHHHHHHhhCCEEEe
Confidence 3567777654211 2357888887766555443 36666 8888777775543 34457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 100 l~~~~~~~~~~~~l~~~~~~~ii~~ 124 (558)
T PRK12583 100 INPAYRASELEYALGQSGVRWVICA 124 (558)
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEEe
Confidence 8788999999999999999887654
No 151
>PRK07529 AMP-binding domain protein; Validated
Probab=89.56 E-value=9.1 Score=33.30 Aligned_cols=97 Identities=9% Similarity=0.047 Sum_probs=67.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.+..+.. ..+...+|.+.+......++.. .++.+ +|++...+|-... .+..+++.+..|. ++.
T Consensus 37 ~~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gi-~~p 111 (632)
T PRK07529 37 RHPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGP-GDVVAFLLPNLPE--THFALWGGEAAGI-ANP 111 (632)
T ss_pred HCCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCE-EEe
Confidence 4678888766543321 1234568888887766555443 46776 8999988885544 3444677788884 455
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...++++...+++.++..++..
T Consensus 112 i~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 112 INPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 5577899999999999999988764
No 152
>PRK13388 acyl-CoA synthetase; Provisional
Probab=89.56 E-value=6.7 Score=33.28 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=65.0
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCC-cCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEF-DKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~-~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++ +- +..+|...+.......+.. .++ .+ ++++...++-... .+..+++.+..|+..+.
T Consensus 14 ~p~~~Al~-~~--------~~~lTy~el~~~~~~la~~L~~~g~~~~-~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~ 81 (540)
T PRK13388 14 GDDTIAVR-YG--------DRTWTWREVLAEAAARAAALIALADPDR-PLHVGVLLGNTPE--MLFWLAAAALGGYVLVG 81 (540)
T ss_pred cCCceEEE-EC--------CceeeHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCcH--HHHHHHHHHhCCCEEEE
Confidence 46777754 31 2368888888766655543 356 45 7888877775444 34457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+..+++...+++.++..++..
T Consensus 82 l~p~~~~~~l~~~l~~~~~~~~i~~ 106 (540)
T PRK13388 82 LNTTRRGAALAADIRRADCQLLVTD 106 (540)
T ss_pred ecccCChHHHHHHHHhcCCCEEEEC
Confidence 8788899999999999999888764
No 153
>PRK07788 acyl-CoA synthetase; Validated
Probab=89.48 E-value=4.1 Score=34.50 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=67.0
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++- . .-.+|.+.+......++.. .++.+ +|++...++-.-. ++..+++.+..|+..+
T Consensus 60 ~~~pd~~Al~~-~--------~~~~Ty~el~~~~~~la~~L~~~gi~~-gd~V~i~~~n~~~--~~~~~la~~~~G~~~v 127 (549)
T PRK07788 60 RRAPDRAALID-E--------RGTLTYAELDEQSNALARGLLALGVRA-GDGVAVLARNHRG--FVLALYAAGKVGARII 127 (549)
T ss_pred HHCCCceEEEE-C--------CCceeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHhcCCEEE
Confidence 34677777652 1 1258888887766555443 36766 8888877764432 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++.+..+++...+++.++..++..
T Consensus 128 ~l~~~~~~~~l~~~l~~~~~~~ii~~ 153 (549)
T PRK07788 128 LLNTGFSGPQLAEVAAREGVKALVYD 153 (549)
T ss_pred EeCCCCCHHHHHHHHHhcCCcEEEEC
Confidence 99888999999999999999988764
No 154
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=89.42 E-value=5.1 Score=32.56 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=23.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHH
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNS 120 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~ 120 (190)
..++++..++-||||||.|--+.+.+..+....
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~ 118 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQ 118 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHH
Confidence 345677889999999999866666665555443
No 155
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=89.33 E-value=6.2 Score=37.65 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=69.3
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++...+...+......+|.+.+.......+..+ +..+ ++++...++-... .+..+++.+..|+..+.
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~-g~~V~i~~~~~~~--~i~~~lA~l~~G~~~vp 324 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKR-GDVVMIYAYRGVD--LVVAVMGVLKAGATFSV 324 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEecCCHH--HHHHHHHHHhhCcEEec
Confidence 4577777664322111111234689998887766655443 6666 8888888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.++.+.++++...++..++..++.
T Consensus 325 ldp~~p~~~~~~~l~~~~~~~li~ 348 (1389)
T TIGR03443 325 IDPAYPPARQTIYLSVAKPRALIV 348 (1389)
T ss_pred cCCCCcHHHHHHHHHhcCCCEEEE
Confidence 888889999999999999887764
No 156
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=88.80 E-value=7.1 Score=33.29 Aligned_cols=89 Identities=9% Similarity=0.010 Sum_probs=65.6
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. -. -.+|.+.+.......+.. .++.+ +|++....|-.-. .+..+++.+..|+..+..
T Consensus 45 ~p~~~a~~~-~~--------~~~Ty~ql~~~~~~~A~~L~~~gi~~-gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 112 (573)
T PRK05605 45 FGDRPALDF-FG--------ATTTYAELGKQVRRAAAGLRALGVRP-GDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEH 112 (573)
T ss_pred CCCCeEEEe-CC--------CcccHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCCHH--HHHHHHHHHhcCcEEeec
Confidence 567777554 21 147888887766555443 46666 8888887776544 345578899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++.+.+.+++.++..++..
T Consensus 113 ~~~~~~~~l~~~l~~~~~~~ii~~ 136 (573)
T PRK05605 113 NPLYTAHELEHPFEDHGARVAIVW 136 (573)
T ss_pred CcCCCHHHHHHHHhccCCcEEEec
Confidence 788999999999999999988754
No 157
>PRK06839 acyl-CoA synthetase; Validated
Probab=88.72 E-value=9.2 Score=31.73 Aligned_cols=90 Identities=9% Similarity=-0.009 Sum_probs=67.3
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh----cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR----LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..|+.++++. .+..+|...+.......+.. .++.+ ++++...++-... +...+++.+..|+..+
T Consensus 14 ~~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~-~~~V~i~~~~~~~--~~~~~la~~~~G~~~~ 81 (496)
T PRK06839 14 LHPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKK-GERIAILSQNSLE--YIVLLFAIAKVECIAV 81 (496)
T ss_pred HCCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHhcCcEEE
Confidence 4567777663 13578999888776665544 35666 8888887776544 3444788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++..+++.+...+++.+++.++..
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~i~~~ 107 (496)
T PRK06839 82 PLNIRLTENELIFQLKDSGTTVLFVE 107 (496)
T ss_pred ecCcccCHHHHHHHHHhcCceEEEEc
Confidence 88777899999999999999988754
No 158
>PRK08316 acyl-CoA synthetase; Validated
Probab=88.61 E-value=9.1 Score=31.97 Aligned_cols=89 Identities=11% Similarity=-0.022 Sum_probs=64.4
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.++.++++... ..+|...+.......+.. .++.+ ++++....|-... +...+++.+..|+..+..
T Consensus 24 ~~~~~a~~~~~---------~~~Ty~~l~~~~~~~a~~L~~~gi~~-~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l 91 (523)
T PRK08316 24 YPDKTALVFGD---------RSWTYAELDAAVNRVAAALLDLGLKK-GDRVAALGHNSDA--YALLWLACARAGAVHVPV 91 (523)
T ss_pred CCCCeEEEECC---------ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHhcCcEEEec
Confidence 45666655321 457888877666544433 36666 7888877775554 244478899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+..+.+...+++.++..++..
T Consensus 92 ~~~~~~~~i~~~l~~~~~~~ii~~ 115 (523)
T PRK08316 92 NFMLTGEELAYILDHSGARAFLVD 115 (523)
T ss_pred ccccCHHHHHHHHHhCCCCEEEEc
Confidence 778899999999999999988754
No 159
>PRK07514 malonyl-CoA synthase; Validated
Probab=88.49 E-value=11 Score=31.27 Aligned_cols=79 Identities=11% Similarity=0.028 Sum_probs=59.8
Q ss_pred eeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCce
Q psy13808 108 AAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCM 184 (190)
Q Consensus 108 gv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT 184 (190)
+..+|...+.......+. ..++.+ +|++....+-.-. ....+++.+..|+..+...+.+.++++...+++.++.
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~-gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 102 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKP-GDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPA 102 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCc
Confidence 346888887766555443 346776 8888777775533 3555788999999999887888999999999999999
Q ss_pred EEecc
Q psy13808 185 EYLTK 189 (190)
Q Consensus 185 ~l~~t 189 (190)
.++..
T Consensus 103 ~ii~~ 107 (504)
T PRK07514 103 LVVCD 107 (504)
T ss_pred EEEEc
Confidence 88764
No 160
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=88.49 E-value=9.7 Score=31.77 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=64.3
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|++++++... -.+|.+.+.......+.. .++.+ ++++...++-.... ...+++.+..|+..+..
T Consensus 13 ~p~~~a~~~~~---------~~~ty~~l~~~v~~~a~~l~~~g~~~-~~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 13 LPDATALVHHD---------RTLTYAALSERVLALASGLRGLGLAR-GERVAIYLDKRLET--VTAMFGAALAGGVFVPI 80 (515)
T ss_pred CCCCeEEEECC---------ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHHH--HHHHHHHHhcCEEEEeC
Confidence 56666654421 268888887665544433 35666 88888887765543 34478899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++.+...+++.++..++..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~ 104 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTS 104 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEc
Confidence 778899999999999999988654
No 161
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=88.48 E-value=11 Score=31.67 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=67.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.-.. .|.. -.+|...+.......+. ..++.+ +|++....+-.... ...+++.+..|+..+.
T Consensus 19 ~~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~-~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~ 91 (517)
T PRK08008 19 VYGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRK-GDKVALHLDNCPEF--IFCWFGLAKIGAIMVP 91 (517)
T ss_pred HCCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHHH--HHHHHHHHHcCeEEEE
Confidence 4677888654221 1111 24788877766655544 347776 88888887765543 3446889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++.+...+++.++..++..
T Consensus 92 l~~~~~~~~l~~~l~~~~~~~l~~~ 116 (517)
T PRK08008 92 INARLLREESAWILQNSQASLLVTS 116 (517)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEe
Confidence 8788999999999999999988754
No 162
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=88.04 E-value=11 Score=31.47 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=58.3
Q ss_pred echHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEe
Q psy13808 111 LTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 111 ~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~ 187 (190)
+|.+.+.......+.. .++.+ ++++....|-... ++..+++.+..|+..+..++...++.+...+++.++..++
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~-~~~V~l~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~ 108 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKK-GDRVAVFDWNSHE--YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVL 108 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEE
Confidence 8888887666554433 46666 8888888876554 3455789999999999987788999999999999988876
Q ss_pred cc
Q psy13808 188 TK 189 (190)
Q Consensus 188 ~t 189 (190)
..
T Consensus 109 ~~ 110 (521)
T PRK06187 109 VD 110 (521)
T ss_pred Ec
Confidence 53
No 163
>PRK13391 acyl-CoA synthetase; Provisional
Probab=87.83 E-value=11 Score=31.54 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=67.2
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++...+| -.+|...+.......+.. .++.+ ++++....+-.... ...+++.+..|+..+.
T Consensus 9 ~~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~-~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~ 78 (511)
T PRK13391 9 TTPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKR-GDHVAIFMENNLRY--LEVCWAAERSGLYYTC 78 (511)
T ss_pred hCCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHhccEEec
Confidence 46677776655443 248888887666555443 36766 88888777765543 3447889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+....+.+...+++.++..+...
T Consensus 79 l~~~~~~~~l~~~l~~~~~~~li~~ 103 (511)
T PRK13391 79 VNSHLTPAEAAYIVDDSGARALITS 103 (511)
T ss_pred cccccCHHHHHHHHhccCCcEEEEc
Confidence 8778899999999999999888664
No 164
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=87.81 E-value=9.7 Score=32.25 Aligned_cols=91 Identities=11% Similarity=0.134 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|++++++-... +..+|.+.+.......+.. .++.+ ++++...+|-...+ ...+++.+..|+..+..
T Consensus 41 ~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~~~g~~~-g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl 110 (546)
T PLN02330 41 YADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALRSLGLRK-GQVVVVVLPNVAEY--GIVALGIMAAGGVFSGA 110 (546)
T ss_pred CCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCchHH--HHHHHHHHHhCcEeccC
Confidence 567777553221 2468898887766555443 46666 88888777765543 34478899999998888
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+....+++...+++.++..++..
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~~i~~ 134 (546)
T PLN02330 111 NPTALESEIKKQAEAAGAKLIVTN 134 (546)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEc
Confidence 677889999999999999888654
No 165
>PRK07798 acyl-CoA synthetase; Validated
Probab=87.66 E-value=9.9 Score=31.78 Aligned_cols=89 Identities=8% Similarity=-0.041 Sum_probs=63.5
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. ++-.+|...+......++.. .++.+ +|++...++-.- ..+..+++.+..|+..+..
T Consensus 16 ~p~~~a~~~---------~~~~~ty~el~~~~~~la~~L~~~g~~~-~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l 83 (533)
T PRK07798 16 VPDRVALVC---------GDRRLTYAELEERANRLAHYLIAQGLGP-GDHVGIYARNRI--EYVEAMLGAFKARAVPVNV 83 (533)
T ss_pred CCCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCH--HHHHHHHHHHhcCeEEEec
Confidence 456766544 23468888877666555443 46666 788777765433 2344578889999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+..+.+...+++.++..++..
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~~~~ 107 (533)
T PRK07798 84 NYRYVEDELRYLLDDSDAVALVYE 107 (533)
T ss_pred CcCCCHHHHHHHHhhcCCCEEEEc
Confidence 788899999999999998887653
No 166
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=87.57 E-value=11 Score=32.21 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=65.7
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++. . +..+|...+.......+..+ ++.+ +|++...+|-.-. ....+++.+..|+..+.
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~-gd~Vai~~~n~~~--~~~~~la~~~~Ga~~v~ 104 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKP-GDRIAVQLPNVLQ--YPVAVFGAMRAGLIVVN 104 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCeEEee
Confidence 567777653 1 23588988887766655433 5666 8888888886544 34457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.+..+++...+++-++..++.
T Consensus 105 l~~~~~~~~l~~~l~~~~~~~ii~ 128 (562)
T PRK05677 105 TNPLYTAREMEHQFNDSGAKALVC 128 (562)
T ss_pred cCCCCCHHHHHHHHhccCceEEEE
Confidence 878889999999999998888764
No 167
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=87.36 E-value=15 Score=30.32 Aligned_cols=91 Identities=12% Similarity=0.022 Sum_probs=66.4
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++.. .-.+|...+.......+. ..++.+ ++++....|-... ++..+++.+..|+..+
T Consensus 13 ~~~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~-~~~v~i~~~~~~~--~~~~~la~~~~G~~~v 80 (483)
T PRK03640 13 FLTPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKK-GDRVALLMKNGME--MILVIHALQQLGAVAV 80 (483)
T ss_pred HhCCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHhCCcEEE
Confidence 346778776532 135888888766554443 335666 8888888776655 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++...++++...+++.++..++..
T Consensus 81 ~i~~~~~~~~~~~~~~~~~~~~vi~~ 106 (483)
T PRK03640 81 LLNTRLSREELLWQLDDAEVKCLITD 106 (483)
T ss_pred ecCcCCCHHHHHHHHHhCCCCEEEEc
Confidence 99778899999999999998877654
No 168
>PRK07470 acyl-CoA synthetase; Validated
Probab=87.27 E-value=11 Score=31.64 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=58.2
Q ss_pred EechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|.+.+.......+. ..++.+ ++++....+-.-. ++..+++.+..|+..+..++.+..+++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~-g~~v~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 108 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRK-GDRILVHSRNCNQ--MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAM 108 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHH--HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEE
Confidence 5788888766655443 346666 7888777765443 345578899999999988778899999999999999988
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
+..
T Consensus 109 i~~ 111 (528)
T PRK07470 109 ICH 111 (528)
T ss_pred EEc
Confidence 654
No 169
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=87.01 E-value=10 Score=32.15 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=64.4
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++.. +..+|...+.......+.. .++.+ +|++...++-.... ...+++.+..|+..+..
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~-gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v 103 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAK-GARVAIMMPNVLQY--PVAIAAVLRAGYVVVNV 103 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCCHHH--HHHHHHHHhcCeEEecc
Confidence 5666665541 2468999888766555443 36766 88887777754432 34468889999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++++...+++.++..++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vi~~ 127 (557)
T PRK07059 104 NPLYTPRELEHQLKDSGAEAIVVL 127 (557)
T ss_pred CcccCHHHHHHHHHccCceEEEEc
Confidence 778899999999999998887753
No 170
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=86.91 E-value=13 Score=31.09 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=62.8
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|++++++- . .-.+|...+.......+. ..+..+ ++++...++-. ..+...+++.+..|+..+..
T Consensus 18 ~p~~~a~~~--~-------~~~~ty~~l~~~~~~~a~~L~~~g~~~-g~~v~l~~~~~--~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 18 RGGKTAFID--D-------ISSLSYGELEAQVRRLGAALRRLGVKR-EERVLLLMLDG--VDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred cCCceEEEe--C-------CceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCC--HHHHHHHHHHHHcCcEEeec
Confidence 567777543 1 124777777665544443 346666 77777665543 33455578899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++.++++++...+++.+++.++..
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~ 109 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVS 109 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEc
Confidence 788899999999999999988754
No 171
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=86.89 E-value=14 Score=31.53 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=60.1
Q ss_pred eEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 109 AFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
..+|.+.+.......+. ..++.+ ++++...++-... +...+++.+..|+..+...+.+.++++...+++.+++.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~-gd~V~i~~~n~~~--~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 148 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEK-GDRVFIFMPRIPE--LYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKV 148 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcE
Confidence 46888888776655544 346776 8888888775544 34557889999999998878899999999999999988
Q ss_pred Eecc
Q psy13808 186 YLTK 189 (190)
Q Consensus 186 l~~t 189 (190)
++..
T Consensus 149 ii~~ 152 (570)
T PRK04319 149 LITT 152 (570)
T ss_pred EEEC
Confidence 8754
No 172
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=86.88 E-value=11 Score=32.42 Aligned_cols=90 Identities=7% Similarity=-0.069 Sum_probs=66.3
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..+++++++.- .-.+|.+.+.......+.. .++.+ ++++...++-... ++..+++.+..|+..+.
T Consensus 49 ~~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~-gd~V~i~~~n~~~--~v~~~lA~~~~G~~~v~ 116 (600)
T PRK08279 49 RHPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGK-GDVVALLMENRPE--YLAAWLGLAKLGAVVAL 116 (600)
T ss_pred hCCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHhcCcEEee
Confidence 45677776641 1357888887766555443 46666 8888888776544 34557889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++....+.+...+++.++..++..
T Consensus 117 l~~~~~~~~l~~~l~~~~~~~li~~ 141 (600)
T PRK08279 117 LNTQQRGAVLAHSLNLVDAKHLIVG 141 (600)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 8778899999999999999988754
No 173
>PLN02736 long-chain acyl-CoA synthetase
Probab=86.85 E-value=14 Score=32.22 Aligned_cols=97 Identities=10% Similarity=-0.064 Sum_probs=67.5
Q ss_pred CCCCCeEEEEe--cCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 88 LNCRDGINIQF--TSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 88 ~~~~~~~~i~~--TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
..|+.+++..- ..|.+|. -..+|.+.+......++. ..++.+ +|++...+|-.--. +..+++.+..|+.+
T Consensus 56 ~~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~-gd~Vai~~~n~~e~--~~~~lA~~~~G~v~ 130 (651)
T PLN02736 56 TFRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPK-GACVGLYFINRPEW--LIVDHACSAYSYVS 130 (651)
T ss_pred hCCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHHH--HHHHHHHHHcCCeE
Confidence 45677765321 2232221 234788888876665554 347777 88888877754432 34468889999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+...+.+.++++...+++-++..++..
T Consensus 131 vpl~~~~~~~~l~~il~~~~~~~l~~~ 157 (651)
T PLN02736 131 VPLYDTLGPDAVKFIVNHAEVAAIFCV 157 (651)
T ss_pred EEeecCCCHHHHHHHHhccCCCEEEEC
Confidence 988788999999999999999988764
No 174
>PRK13390 acyl-CoA synthetase; Provisional
Probab=86.36 E-value=17 Score=30.28 Aligned_cols=92 Identities=9% Similarity=0.026 Sum_probs=66.0
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++... +| -.+|...+......++.. .++.+ +|++...++-... .+..+++.+..|+..+.
T Consensus 9 ~~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~-gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~ 78 (501)
T PRK13390 9 IAPDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRT-GDVVALLSDNSPE--ALVVLWAALRSGLYITA 78 (501)
T ss_pred hCCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEec
Confidence 356777655422 12 358888887766655543 36666 8888877775544 34457889999999988
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...++..++..+...
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~i~~ 103 (501)
T PRK13390 79 INHHLTAPEADYIVGDSGARVLVAS 103 (501)
T ss_pred cccCCCHHHHHHHHHhcCCcEEEEc
Confidence 8778899999999999998887653
No 175
>PRK06164 acyl-CoA synthetase; Validated
Probab=86.21 E-value=13 Score=31.41 Aligned_cols=89 Identities=8% Similarity=0.107 Sum_probs=64.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|++++++. +.-.+|...+......++. ..++.+ ++++...++-.... +..+++.+..|+..+.
T Consensus 22 ~~p~~~a~~~---------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~-g~~V~i~~~n~~~~--~~~~la~~~~G~~~v~ 89 (540)
T PRK06164 22 ARPDAVALID---------EDRPLSRAELRALVDRLAAWLAAQGVRR-GDRVAVWLPNCIEW--VVLFLACARLGATVIA 89 (540)
T ss_pred hCCCCeEEec---------CCCcccHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCcHHH--HHHHHHHHHhCcEEEe
Confidence 3567777651 1235788888766554443 346666 88888877766543 4447889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+....+++...+++.+++.++.
T Consensus 90 l~~~~~~~~l~~~i~~~~~~~ii~ 113 (540)
T PRK06164 90 VNTRYRSHEVAHILGRGRARWLVV 113 (540)
T ss_pred cCCCCCcHHHHHHHHhcCccEEEE
Confidence 877889999999999999988765
No 176
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=86.18 E-value=9.5 Score=32.39 Aligned_cols=76 Identities=12% Similarity=0.016 Sum_probs=60.3
Q ss_pred EechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 110 FLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.+|.+.+.......+..+.-.+ +|++...+|-...+ +..+++.+..|+..+...+.+..+++...++.-++..++.
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~-gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 120 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYP-DQHIGIMMPASAGA--YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLT 120 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhcc-CCeEEEEcCCchHH--HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEe
Confidence 4799988888777776665445 88888888865443 4447899999999999877889999999999999988765
No 177
>PRK05852 acyl-CoA synthetase; Validated
Probab=85.91 E-value=16 Score=30.77 Aligned_cols=91 Identities=9% Similarity=-0.020 Sum_probs=65.2
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+..+++... + ...+|...+.......+. ..++.+ +|++...+|-.-. ....+++.+..|+..+.
T Consensus 28 ~~p~~~ai~~~~-~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~-gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 97 (534)
T PRK05852 28 RLPEAPALVVTA-D------RIAISYRDLARLVDDLAGQLTRSGLLP-GDRVALRMGSNAE--FVVALLAASRADLVVVP 97 (534)
T ss_pred hCCCCcEEEecC-C------CCcccHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCcHH--HHHHHHHHHHcCcEEee
Confidence 356777755422 1 135788877766555443 346766 8888888775443 34457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.+.++.+...++..++..++.
T Consensus 98 l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 98 LDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cCCCCCcHHHHHHHHhCCCCEEEE
Confidence 878889999999999999998874
No 178
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=85.82 E-value=0.34 Score=41.25 Aligned_cols=32 Identities=34% Similarity=0.230 Sum_probs=25.8
Q ss_pred cCCCCCeEEEEecCCCCCC-CceeEechHHHHH
Q psy13808 87 SLNCRDGINIQFTSGTTGH-PKAAFLTHYNLIN 118 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~-PKgv~~sh~~~~~ 118 (190)
..-++.+.+...||||||. ||-+.+|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 3566778899999999999 9999999987654
No 179
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=85.81 E-value=19 Score=30.36 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=66.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++..-... .....+|...+.......+.. .++.+ ++++...++-.... ...+++.+..|+.++.
T Consensus 34 ~~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~-g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~ 107 (538)
T TIGR03208 34 NCPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGR-GDVVSFQLPNRWEF--TALYLACARIGAVLNP 107 (538)
T ss_pred HCCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHhcCEEEec
Confidence 356777766532211 113468888887666554443 46666 88888777754432 3446888999999888
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...++++...++..++..++..
T Consensus 108 l~~~~~~~~l~~~l~~~~~~~li~~ 132 (538)
T TIGR03208 108 LMPIFRERELSFMLNHADSKVFVVP 132 (538)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEc
Confidence 8777899999999999999888753
No 180
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=85.61 E-value=12 Score=31.76 Aligned_cols=88 Identities=13% Similarity=0.136 Sum_probs=63.8
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++. ++..+|...+.......+..+ ++.+ +|++...++-.-. ....+++.+..|+..+.
T Consensus 37 ~p~~~a~~~---------~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~-gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~ 104 (562)
T PRK12492 37 FADRPAFSN---------LGVTLSYAELERHSAAFAAYLQQHTDLVP-GDRIAVQMPNVLQ--YPIAVFGALRAGLIVVN 104 (562)
T ss_pred CCCCeeEec---------CCceeeHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCeEEec
Confidence 566666542 124678888877665554433 6666 8888887775443 34557889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.+..+++...+++-++..++.
T Consensus 105 ~~~~~~~~~l~~~l~~~~~~~~i~ 128 (562)
T PRK12492 105 TNPLYTAREMRHQFKDSGARALVY 128 (562)
T ss_pred cCccCCHHHHHHHHhccCceEEEe
Confidence 877889999999999999888765
No 181
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=85.46 E-value=8.2 Score=32.90 Aligned_cols=77 Identities=8% Similarity=-0.022 Sum_probs=59.7
Q ss_pred EechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+.. .++.+ +|++...+|-.-. ++..+++.+..|+..+...+.+.++++...+++.++..+
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~-gd~V~v~~~n~~~--~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i 108 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRN-GDVVAIAALNSDL--YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVML 108 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHH--HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEE
Confidence 57888887766555443 46777 8998888886544 344478889999999988788999999999999999888
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
+..
T Consensus 109 ~~~ 111 (563)
T PLN02860 109 VTD 111 (563)
T ss_pred EEe
Confidence 764
No 182
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=85.35 E-value=8.9 Score=32.55 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=66.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..+++++++.. | -.+|...+.......+. ..++.+ ++++...+|-.-. +...+++.+..|+..+
T Consensus 37 ~~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~-g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v 104 (560)
T PRK08751 37 KFADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKK-GDRVALMMPNCLQ--YPIATFGVLRAGLTVV 104 (560)
T ss_pred hCCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCeEEe
Confidence 35677776532 2 24788888776655553 356776 8888887775543 3455788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
...+.+.++++...+++.+++.++..|
T Consensus 105 ~l~p~~~~~~~~~~l~~~~~~~vi~~~ 131 (560)
T PRK08751 105 NVNPLYTPRELKHQLIDSGASVLVVID 131 (560)
T ss_pred ccCccCCHHHHHHHHHhcCCeEEEEcc
Confidence 887889999999999999999887653
No 183
>PRK13383 acyl-CoA synthetase; Provisional
Probab=85.34 E-value=8.9 Score=32.19 Aligned_cols=91 Identities=10% Similarity=0.028 Sum_probs=65.3
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. -.+ .+|...+.......+.. .++.+ ++++...++-.-. .+..+++.+..|+..+.
T Consensus 47 ~~p~~~a~~~-~~~--------~lTy~el~~~~~~la~~L~~~gi~~-g~~V~i~~~~~~~--~~~~~la~~~~G~v~vp 114 (516)
T PRK13383 47 RWPGRTAIID-DDG--------ALSYRELQRATESLARRLTRDGVAP-GRAVGVMCRNGRG--FVTAVFAVGLLGADVVP 114 (516)
T ss_pred HCCCCcEEEe-CCC--------cEeHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCeEEEE
Confidence 4567777543 111 47877777666555443 36666 8888877764332 34457889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.++.+.++.+...+++.++..++..|
T Consensus 115 l~~~~~~~~l~~~l~~~~~~~ii~~~ 140 (516)
T PRK13383 115 ISTEFRSDALAAALRAHHISTVVADN 140 (516)
T ss_pred cCccCCHHHHHHHHhcCCCCEEEEch
Confidence 87889999999999999999887643
No 184
>PRK06188 acyl-CoA synthetase; Validated
Probab=85.20 E-value=18 Score=30.39 Aligned_cols=89 Identities=12% Similarity=-0.062 Sum_probs=63.7
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.+++++++.. + ..+|...+.......+. ..++.+ ++++...++-.-. ....+++.+..|+..+..
T Consensus 25 ~~~~~a~~~~--~-------~~~Ty~~l~~~~~~~a~~L~~~gv~~-~~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l 92 (524)
T PRK06188 25 YPDRPALVLG--D-------TRLTYGQLADRISRYIQAFEALGLGT-GDAVALLSLNRPE--VLMAIGAAQLAGLRRTAL 92 (524)
T ss_pred CCCCeEEEEC--C-------CcccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCCEEEec
Confidence 5667665542 1 36788888766655443 346666 7777777664433 344478899999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+....+.+...++..+++.+...
T Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~~~ 116 (524)
T PRK06188 93 HPLGSLDDHAYVLEDAGISTLIVD 116 (524)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEe
Confidence 778899999999999999988654
No 185
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=85.14 E-value=23 Score=30.36 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=68.7
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh----cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR----LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP 167 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~ 167 (190)
+...|+|-+-..+. -.+|.+.+.......+.. .+. + +|++...+|..--. ...+++++..|+......+
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-k-GDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~ 97 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-K-GDRVAIYMPNSPEA--VIALLATARIGAIPAVVSP 97 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-C-CCEEEEEcCCCHHH--HHHHHHHHHcCCEEeeccc
Confidence 34446666544444 678888887665554443 344 5 99999999987664 4447889999988887778
Q ss_pred CCChHHHHHHHHHCCceEEeccC
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.|.++.+..-|+.-++.++++.|
T Consensus 98 ~f~~~al~~Ri~d~~~k~vit~d 120 (528)
T COG0365 98 GLSAEAVADRIADLGPKVLIADD 120 (528)
T ss_pred CCCHHHHHHHHHccCCCEEEEec
Confidence 89999999999999999998765
No 186
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=84.74 E-value=14 Score=29.66 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=48.4
Q ss_pred cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 127 LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 127 ~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+ +|++....|-.-. +...+++.+..|+.++...+....+.+-..+++.+++.++..
T Consensus 20 ~g~~~-gd~v~l~~~n~~~--~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~ 79 (408)
T TIGR01733 20 GGVGP-GDRVAVLLERSAE--LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTD 79 (408)
T ss_pred hCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEc
Confidence 45666 8888888776533 344478999999999988778899999999999999988764
No 187
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.58 E-value=23 Score=30.17 Aligned_cols=92 Identities=18% Similarity=0.219 Sum_probs=67.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..++.++++...-+. .+|.+.+.......+..+ ++.+ +|++...+|=...+ +..+++++..|+..+.
T Consensus 23 ~~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~-gdrVail~~N~~e~--~~~~~a~~~~Gav~vp 92 (534)
T COG0318 23 RNPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKP-GDRVAILLPNSPEF--LIAFLAALRAGAVAVP 92 (534)
T ss_pred hCCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHhcCEEEee
Confidence 456777765544433 788888887766555433 4555 88888888865543 4447889999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...+.++...++..++..++..
T Consensus 93 ln~~~~~~~l~~~l~~~~~~~~~~~ 117 (534)
T COG0318 93 LNPRLTPRELAYILNDAGAKVLITS 117 (534)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEc
Confidence 9777889999999999888877654
No 188
>PRK12582 acyl-CoA synthetase; Provisional
Probab=83.70 E-value=10 Score=32.84 Aligned_cols=96 Identities=14% Similarity=0.058 Sum_probs=65.2
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++....+ .| ..-.+|.+.+.......+.. .++.+ +|++...++-... .+..+++.+..|+..+.
T Consensus 61 ~~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vp 134 (624)
T PRK12582 61 EAPDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDP-GRPVMILSGNSIE--HALMTLAAMQAGVPAAP 134 (624)
T ss_pred HCCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEecCCCHH--HHHHHHHHHHcCCeEee
Confidence 35666665542211 12 13468988888776655543 36776 8888888884432 34457889999999988
Q ss_pred cCCCCCh-----HHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKP-----MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~-----~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.. +++...+++.++..++..
T Consensus 135 l~p~~~~~~~~~~~l~~~l~~~~~~~vi~~ 164 (624)
T PRK12582 135 VSPAYSLMSHDHAKLKHLFDLVKPRVVFAQ 164 (624)
T ss_pred ccCccccccCCHHHHHHHHHhcCCcEEEec
Confidence 8666653 899999999998887754
No 189
>KOG1176|consensus
Probab=83.46 E-value=9.6 Score=32.72 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=64.0
Q ss_pred eeEechHHHHHHHHHhhhhc---C--CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCC
Q psy13808 108 AAFLTHYNLINNSNFIGKRL---E--FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEK 182 (190)
Q Consensus 108 gv~~sh~~~~~~~~~~~~~~---~--~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~ 182 (190)
|..+|++.+...+...+..+ + ... +|++...+|=...+. ...++.+..|+.+.-..+.+++.++...++.-+
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~-gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~ 119 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKK-GDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSK 119 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCC-CCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhcC
Confidence 88999999988776665544 2 454 999999999776654 335788899999998878899999999999999
Q ss_pred ceEEecc
Q psy13808 183 CMEYLTK 189 (190)
Q Consensus 183 iT~l~~t 189 (190)
..+++..
T Consensus 120 ~kiif~d 126 (537)
T KOG1176|consen 120 PKLIFVD 126 (537)
T ss_pred CeEEEEc
Confidence 9988763
No 190
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=83.37 E-value=15 Score=31.08 Aligned_cols=89 Identities=7% Similarity=0.044 Sum_probs=64.6
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---c-CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---L-EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~-~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++.++++... ..+|...+.......+.. . ++.+ ++++...++-.- ..+..+++.+..|+..+.
T Consensus 23 ~~~~~a~~~~~---------~~~Ty~~l~~~v~~~a~~L~~~~g~~~-g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~ 90 (546)
T PRK08314 23 YPDKTAIVFYG---------RAISYRELLEEAERLAGYLQQECGVRK-GDRVLLYMQNSP--QFVIAYYAILRANAVVVP 90 (546)
T ss_pred cCCCcceeecC---------ceecHHHHHHHHHHHHHHHHHhhCCCC-CCEEEEECCCCh--HHHHHHHHHHHcCcEEee
Confidence 56666655421 247888887666544432 2 7776 888887777543 234557899999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...++++...+++.++..++.+
T Consensus 91 l~~~~~~~~l~~~l~~~~~~~ii~~ 115 (546)
T PRK08314 91 VNPMNREEELAHYVTDSGARVAIVG 115 (546)
T ss_pred cCcCcCHHHHHHHHHhCCCeEEEEc
Confidence 8788899999999999999887654
No 191
>PLN02479 acetate-CoA ligase
Probab=83.34 E-value=23 Score=30.23 Aligned_cols=90 Identities=7% Similarity=0.021 Sum_probs=65.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. +. ..+|...+.......+..+ ++.+ +|++....|-.-. .+..+++.+..|+..+.
T Consensus 32 ~~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~-gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~ 99 (567)
T PLN02479 32 VHPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGP-GSTVAVIAPNIPA--MYEAHFGVPMAGAVVNC 99 (567)
T ss_pred hCCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCcHH--HHHHHHHHHhCCcEEEE
Confidence 4677777653 11 2478887777666555443 6776 8888877775433 34447889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+..+++...+++.++..++..
T Consensus 100 l~~~~~~~~l~~~l~~~~~~~ii~~ 124 (567)
T PLN02479 100 VNIRLNAPTIAFLLEHSKSEVVMVD 124 (567)
T ss_pred eccccCHHHHHHHHhhcCceEEEEc
Confidence 8788999999999999999888754
No 192
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=83.33 E-value=14 Score=31.32 Aligned_cols=90 Identities=7% Similarity=-0.039 Sum_probs=65.9
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..+++++++. . .-.+|.+.+.......+.. .++.+ ++++....|-.... +..+++.+..|+..+.
T Consensus 33 ~~p~~~a~~~--~-------~~~~Ty~el~~~v~~la~~L~~~gi~~-g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vp 100 (542)
T PRK06155 33 RYPDRPLLVF--G-------GTRWTYAEAARAAAAAAHALAAAGVKR-GDRVALMCGNRIEF--LDVFLGCAWLGAIAVP 100 (542)
T ss_pred HCCCCeEEEe--C-------CccccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChHH--HHHHHHHHHhCCEEEE
Confidence 3567776543 1 1357888887766655543 46666 88888777755443 4457889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+..+++...+++.+++.++..
T Consensus 101 l~~~~~~~~l~~~l~~~~~~~l~~~ 125 (542)
T PRK06155 101 INTALRGPQLEHILRNSGARLLVVE 125 (542)
T ss_pred eccccCHHHHHHHHHhcCceEEEEC
Confidence 8788999999999999999988754
No 193
>PRK08162 acyl-CoA synthetase; Validated
Probab=83.23 E-value=13 Score=31.41 Aligned_cols=91 Identities=5% Similarity=0.001 Sum_probs=67.9
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...++.++++. - +..+|.+.+.......+..+ ++.+ +|++...+|-... ++..+++.+..|+..+
T Consensus 29 ~~~~~~~a~~~-~--------~~~~ty~~L~~~~~~~a~~L~~~g~~~-g~~v~i~~~~~~~--~~~~~lA~~~~G~~~v 96 (545)
T PRK08162 29 EVYPDRPAVIH-G--------DRRRTWAETYARCRRLASALARRGIGR-GDTVAVLLPNIPA--MVEAHFGVPMAGAVLN 96 (545)
T ss_pred HHCCCCeEEEE-C--------CeEEEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCchH--HHHHHHHHHHhCcEEe
Confidence 34677777543 1 13588888887766555433 6766 8888888886654 3445788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++.+..+++...+++.+++.++..
T Consensus 97 pl~~~~~~~~~~~~l~~~~~~~i~~~ 122 (545)
T PRK08162 97 TLNTRLDAASIAFMLRHGEAKVLIVD 122 (545)
T ss_pred ccccccChHHHHHHHHhCCCeEEEEc
Confidence 88788999999999999999988753
No 194
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=82.89 E-value=13 Score=30.89 Aligned_cols=78 Identities=17% Similarity=0.066 Sum_probs=57.8
Q ss_pred EechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+.. .+..+ ++++....+-... ....+++.+..|+..+...+...++.+...+++.++..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~-~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPD-KSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 48888887766555443 35555 7887777764433 345578899999999988777889999999999999988
Q ss_pred eccC
Q psy13808 187 LTKD 190 (190)
Q Consensus 187 ~~t~ 190 (190)
+..|
T Consensus 104 ~~~~ 107 (503)
T PRK04813 104 IATE 107 (503)
T ss_pred Eecc
Confidence 7653
No 195
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=82.78 E-value=17 Score=29.56 Aligned_cols=61 Identities=7% Similarity=0.012 Sum_probs=48.9
Q ss_pred hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 126 RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 126 ~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++.+ +|++...+|-.-. ....+++.+..|+..+..++.+..+.+...+++.++..++..
T Consensus 18 ~~g~~~-gd~v~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 78 (436)
T TIGR01923 18 AQGIRS-GSRVALVGQNSIE--MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTD 78 (436)
T ss_pred HhCCCC-CCEEEEEcCCCHH--HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEc
Confidence 346766 8888888776543 345578899999999998788999999999999999988754
No 196
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=82.40 E-value=13 Score=32.06 Aligned_cols=95 Identities=11% Similarity=-0.020 Sum_probs=66.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++... ..| ....+|.+.+.......+.. .++.+ +|++...++-..- .+..+++.+..|+.++.
T Consensus 51 ~~p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~-gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vp 123 (614)
T PRK08180 51 EAPDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLDRGLSA-ERPLMILSGNSIE--HALLALAAMYAGVPYAP 123 (614)
T ss_pred HCCCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEecCCCHH--HHHHHHHHHHcCCeEee
Confidence 356777765431 112 13467888888776665543 36666 8888887775544 34447889999999998
Q ss_pred cCCCCC-----hHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFK-----PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~-----~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+. ++++...+++.++..++..
T Consensus 124 l~~~~~~~~~~~~~l~~~l~~~~~~~li~~ 153 (614)
T PRK08180 124 VSPAYSLVSQDFGKLRHVLELLTPGLVFAD 153 (614)
T ss_pred eccccccccCCHHHHHHHHhcCCCcEEEEc
Confidence 866666 7899999999999888764
No 197
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=82.04 E-value=17 Score=30.24 Aligned_cols=77 Identities=14% Similarity=0.071 Sum_probs=57.6
Q ss_pred EechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+..+ ++.+ ++++....+-.-.. ...+++.+..|+..+..++....+.+...+++.++..+
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~-~~~V~i~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPK-KSPIIVYGHMEPHM--LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELV 101 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCC-CCeEEEEeCCCHHH--HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEE
Confidence 688888887666555433 5565 67777666654433 34478899999998888777888999999999999988
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
+.+
T Consensus 102 i~~ 104 (502)
T TIGR01734 102 IHT 104 (502)
T ss_pred Eec
Confidence 765
No 198
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=81.48 E-value=20 Score=29.53 Aligned_cols=90 Identities=10% Similarity=-0.034 Sum_probs=65.3
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|++++++. . +..+|.+.+.......+.. .++.+ ++++....+-.-. ....+++.+..|+..+.
T Consensus 15 ~~~~~~a~~~--~-------~~~~ty~el~~~~~~~a~~L~~~g~~~-~~~v~l~~~~~~~--~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 15 VRPQAIALRL--N-------DEVLTWQQLCARIDQLAAGFAQQGVVE-GSGVALRGKNSPE--TLLAYLALLQCGARVLP 82 (458)
T ss_pred hCCCceeeec--C-------CcceeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEecCCCHH--HHHHHHHHHHcCCEEee
Confidence 3567777652 1 2358888888776665543 36666 7888777665443 24447888999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...++.+-..+++.++..++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~ 107 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVL 107 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEc
Confidence 8788899999999999999887754
No 199
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=81.01 E-value=19 Score=30.06 Aligned_cols=78 Identities=10% Similarity=0.001 Sum_probs=57.5
Q ss_pred EechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+. ..++.+ +|++....+-.... ...+++.+..|+..+..++.+..+.+...+++.++..+
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~-~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLRE-GDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 4666666655444333 346776 88888887765443 34478899999999988778899999999999999988
Q ss_pred eccC
Q psy13808 187 LTKD 190 (190)
Q Consensus 187 ~~t~ 190 (190)
+..|
T Consensus 88 i~~~ 91 (502)
T PRK08276 88 IVSA 91 (502)
T ss_pred EEcc
Confidence 7653
No 200
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=80.78 E-value=18 Score=31.79 Aligned_cols=78 Identities=10% Similarity=0.006 Sum_probs=60.0
Q ss_pred eEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 109 AFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
..+|.+.+.......+.. .++.+ +|++...++-..- .+...++.+..|+..|...+.+.++++...+++-++..
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~-gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNP-GDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 358888888766655543 46776 8888887775443 23447889999999998878899999999999999988
Q ss_pred Eecc
Q psy13808 186 YLTK 189 (190)
Q Consensus 186 l~~t 189 (190)
++..
T Consensus 153 v~~~ 156 (660)
T PLN02861 153 AFVQ 156 (660)
T ss_pred EEEC
Confidence 8753
No 201
>PLN02614 long-chain acyl-CoA synthetase
Probab=80.29 E-value=16 Score=32.10 Aligned_cols=97 Identities=9% Similarity=-0.014 Sum_probs=67.3
Q ss_pred CCCCCeEEEEec--CCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 88 LNCRDGINIQFT--SGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 88 ~~~~~~~~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
..|+.++++.-. .|..|. -..+|.+.+......++. ..++.+ +|++...++-..- ++...++.+..|+..
T Consensus 57 ~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~Gv~~-Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~ 131 (666)
T PLN02614 57 KYPNNPMLGRREIVDGKPGK--YVWQTYQEVYDIVIKLGNSLRSVGVKD-EAKCGIYGANSPE--WIISMEACNAHGLYC 131 (666)
T ss_pred hCCCCCeEEEecccCCCCCC--cEEeEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEE
Confidence 356777765321 121121 134688887766655544 347777 8888887775543 344478899999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
|...+.+.++++...+++.++.+++..
T Consensus 132 vpl~~~~~~~~l~~il~~~~~~~vi~~ 158 (666)
T PLN02614 132 VPLYDTLGAGAVEFIISHSEVSIVFVE 158 (666)
T ss_pred EEecCCCCHHHHHHHHhccCCCEEEEC
Confidence 988788999999999999999988764
No 202
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.23 E-value=30 Score=29.42 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=63.1
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh----cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR----LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++. . +-.+|...+.......+.. .++.+ ++++....+-... +...+++.+..|+..+.
T Consensus 36 ~p~~~a~~~--~-------~~~lTy~~l~~~~~~la~~L~~~~g~~~-g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~ 103 (560)
T PRK08974 36 YADQPAFIN--M-------GEVMTFRKLEERSRAFAAYLQNGLGLKK-GDRVALMMPNLLQ--YPIALFGILRAGMIVVN 103 (560)
T ss_pred CCCCceEEE--C-------CccccHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCcEEec
Confidence 566677653 1 2357888877666555443 35665 7887777664433 34557899999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.++...++.+.+.+++.++..+..
T Consensus 104 l~~~~~~~~~~~~l~~~~~~~ii~ 127 (560)
T PRK08974 104 VNPLYTPRELEHQLNDSGAKAIVI 127 (560)
T ss_pred cCccCCHHHHHHHHHhcCceEEEE
Confidence 878889999999999999888764
No 203
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=79.34 E-value=1 Score=38.92 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=25.3
Q ss_pred CCCCCeEEEEecCCCC-CCCceeEechHHHH
Q psy13808 88 LNCRDGINIQFTSGTT-GHPKAAFLTHYNLI 117 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTT-G~PKgv~~sh~~~~ 117 (190)
.-++.+.+..-||||| |.+|-+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4567778899999999 89999999996554
No 204
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=79.21 E-value=29 Score=28.83 Aligned_cols=76 Identities=13% Similarity=0.074 Sum_probs=52.7
Q ss_pred chHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 112 THYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 112 sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.+.......+..+ +...+++++....+-.-- ++..+++.+..|+.++...+.+..+++...+++.++.+++.
T Consensus 21 ~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e--~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 21 NSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQ--FLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHH--HHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 3455555554444333 443237777776664322 24447888999999999888899999999999999988875
Q ss_pred c
Q psy13808 189 K 189 (190)
Q Consensus 189 t 189 (190)
.
T Consensus 99 ~ 99 (452)
T PRK07445 99 L 99 (452)
T ss_pred c
Confidence 3
No 205
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=78.96 E-value=2.6 Score=36.59 Aligned_cols=31 Identities=26% Similarity=0.274 Sum_probs=25.4
Q ss_pred CCCCCeEEEEecCCCCC-CCceeEechHHHHH
Q psy13808 88 LNCRDGINIQFTSGTTG-HPKAAFLTHYNLIN 118 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG-~PKgv~~sh~~~~~ 118 (190)
..++.+.+..-|||||| ++|-+.++...+-.
T Consensus 86 lt~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 117 (606)
T PLN02247 86 ISAQPITELLTSSGTSGGQPKLMPSTAEELDR 117 (606)
T ss_pred eCCCCcceeeccCCCCCCceeEeeccHHHHHH
Confidence 34677788999999995 89999999876543
No 206
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.41 E-value=21 Score=30.34 Aligned_cols=89 Identities=10% Similarity=0.083 Sum_probs=64.0
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. . +-.+|...+.......+.. .++.. +|++...++-.... +..+++.+..|+..+..
T Consensus 37 ~p~~~a~~~-~--------~~~~ty~eL~~~~~~la~~L~~~gv~~-gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi 104 (563)
T PRK06710 37 YPEKKALHF-L--------GKDITFSVFHDKVKRFANYLQKLGVEK-GDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQT 104 (563)
T ss_pred CCCceEEEe-c--------CeeecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChHH--HHHHHHHHHcCeEEecc
Confidence 556666544 2 1257888887666554443 36666 78888887765543 44478889999888888
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+..+++...+++.+++.++..
T Consensus 105 ~p~~~~~~l~~~l~~~~~~~ii~~ 128 (563)
T PRK06710 105 NPLYTERELEYQLHDSGAKVILCL 128 (563)
T ss_pred CcccCHHHHHHHHhccCCeEEEEe
Confidence 778899999999999999888754
No 207
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=78.21 E-value=22 Score=29.91 Aligned_cols=90 Identities=10% Similarity=0.017 Sum_probs=63.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.. +-.+|.+.+.......+.. .++.+ ++++...++-... +...+++.+..|+..+.
T Consensus 35 ~~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~-g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~ 102 (527)
T TIGR02275 35 RYPDAIAIICG---------NRQWSYRELDQRADNLAAGLTKLGIGQ-GDTAVVQLPNIAE--FYIVFFALLKLGIAPVL 102 (527)
T ss_pred HCCCceEEEeC---------CceecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCcHH--HHHHHHHHHHcCeEEec
Confidence 46777776531 1368888887766555443 46666 7888877764433 34457888999998887
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
......++.+...+++.++..+...
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~li~~ 127 (527)
T TIGR02275 103 ALFSHRKSELTAYAQQIEPALYIID 127 (527)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEc
Confidence 6566788999999999999887754
No 208
>PRK06178 acyl-CoA synthetase; Validated
Probab=77.94 E-value=25 Score=29.88 Aligned_cols=90 Identities=13% Similarity=0.151 Sum_probs=64.1
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+++++... | ..+|...+.......+. ..++.+ ++++...+|-... +...+++.+..|+..+..
T Consensus 46 ~p~~~al~~~--~-------~~~Ty~~l~~~~~~la~~L~~~g~~~-g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l 113 (567)
T PRK06178 46 RPQRPAIIFY--G-------HVITYAELDELSDRFAALLRQRGVGA-GDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPV 113 (567)
T ss_pred CCCceEEEEC--C-------ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCcH--HHHHHHHHHHhCeEEeec
Confidence 4666665432 2 25788888766655443 346666 7787777775544 344478889999998888
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+......+...+++.++..++..|
T Consensus 114 ~p~~~~~~~~~~l~~~~~~~ii~~~ 138 (567)
T PRK06178 114 SPLFREHELSYELNDAGAEVLLALD 138 (567)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 7788999999999999999887653
No 209
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=77.66 E-value=20 Score=30.31 Aligned_cols=94 Identities=9% Similarity=-0.002 Sum_probs=65.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.-.-| . ...+|...+.......+.. .++.+ +|++...+|-.... ...+++.+..|+..+.
T Consensus 22 ~~~~~~~~~~~~~~---~--~~~~Ty~el~~~v~~la~~L~~~g~~~-gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~ 93 (542)
T PRK06018 22 IHGNREVVTRSVEG---P--IVRTTYAQIHDRALKVSQALDRDGIKL-GDRVATIAWNTWRH--LEAWYGIMGIGAICHT 93 (542)
T ss_pred hCCCceEEEeeccC---C--ceEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCchHH--HHHHHHHHhcCeEeec
Confidence 35666665421122 1 3357888887766655543 46776 88887777755443 3346888899999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++.+...+++.++..++..
T Consensus 94 l~~~~~~~~l~~~l~~~~~~~i~~~ 118 (542)
T PRK06018 94 VNPRLFPEQIAWIINHAEDRVVITD 118 (542)
T ss_pred cccccCHHHHHHHHhccCCCEEEEc
Confidence 8788899999999999999888653
No 210
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=77.55 E-value=26 Score=29.32 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=57.1
Q ss_pred EechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+. ..++.+ ++++....|-.-. ++..+++.+..|+..+...+.+..+++...+++.++..+
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~-g~~V~v~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRP-GDCVALLMRNDFA--FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 4667766655444433 346766 8888887775443 345578899999999988788899999999999999888
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
+..
T Consensus 88 ~~~ 90 (509)
T PRK12406 88 IAH 90 (509)
T ss_pred EEc
Confidence 753
No 211
>PRK13382 acyl-CoA synthetase; Provisional
Probab=77.49 E-value=28 Score=29.48 Aligned_cols=91 Identities=13% Similarity=0.042 Sum_probs=66.4
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++. . + -.+|...+......++.. .++.+ ++++...++-.-. .+..+++.+..|+.++
T Consensus 54 ~~~p~~~a~~~-~-~-------~~~Ty~el~~~~~~~A~~L~~~g~~~-g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 54 QRCPDRPGLID-E-L-------GTLTWRELDERSDALAAALQALPIGE-PRVVGIMCRNHRG--FVEALLAANRIGADIL 121 (537)
T ss_pred HhCCCCeEEEe-C-C-------CeecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEecCcHH--HHHHHHHHHHcCcEEE
Confidence 34677777763 1 1 158888877666555543 36666 8888877774433 4555789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+....+++...+++.++..++..
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~ 147 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYD 147 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEc
Confidence 98788899999999999999988653
No 212
>PLN02574 4-coumarate--CoA ligase-like
Probab=77.42 E-value=44 Score=28.45 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=63.5
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---h-cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---R-LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~-~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++.++++- +.+| ..+|.+.+.......+. . .++.+ +|++...++-... +...+++.+..|+..+.
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~-gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~ 121 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQ-GDVVLLLLPNSVY--FPVIFLAVLSLGGIVTT 121 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCcch--HHHHHHHHHHhCeEEeC
Confidence 456666553 2222 24688877665554443 2 56766 8888888775443 34447889999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 122 l~p~~~~~~l~~~l~~~~~~~~~~~ 146 (560)
T PLN02574 122 MNPSSSLGEIKKRVVDCSVGLAFTS 146 (560)
T ss_pred cCcccCHHHHHHHHHhcCCEEEEEC
Confidence 8778899999999999998877653
No 213
>PRK07787 acyl-CoA synthetase; Validated
Probab=77.02 E-value=28 Score=28.77 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=57.2
Q ss_pred EechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 110 FLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+|.+.+.......+..+. + .+++....|-. ..+...+++.+..|+..+..++.+.++.+...+++.++..+...
T Consensus 25 ~~Ty~el~~~~~~~a~~L~--~-~~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~ 99 (471)
T PRK07787 25 VLSRSDLAGAATAVAERVA--G-ARRVAVLATPT--LATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGP 99 (471)
T ss_pred EEEHHHHHHHHHHHHHHhc--c-CCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEec
Confidence 4788888877776666543 4 66776665543 23455578899999999988788899999999999999988764
No 214
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.83 E-value=30 Score=29.28 Aligned_cols=89 Identities=10% Similarity=-0.036 Sum_probs=62.5
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. -. -.+|...+.......+.. .++.+ ++++...++-.-. ....+++.+..|+..+..
T Consensus 30 ~~~~~a~~~-~~--------~~~ty~~l~~~~~~~a~~L~~~g~~~-g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl 97 (542)
T PRK07786 30 QPDAPALRF-LG--------NTTTWRELDDRVAALAGALSRRGVGF-GDRVLILMLNRTE--FVESVLAANMLGAIAVPV 97 (542)
T ss_pred CCCCeEEEe-CC--------CcccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCeEEEEc
Confidence 567776542 21 258888877665544433 36766 7777766664333 344578889999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+...++++...+++.++..++..
T Consensus 98 ~~~~~~~~~~~~l~~~~~~~ii~~ 121 (542)
T PRK07786 98 NFRLTPPEIAFLVSDCGAHVVVTE 121 (542)
T ss_pred CccCCHHHHHHHHHhCCCcEEEEc
Confidence 777899999999999999887654
No 215
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=76.57 E-value=30 Score=29.21 Aligned_cols=77 Identities=14% Similarity=0.123 Sum_probs=57.4
Q ss_pred EechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+. ..++.+ ++++...++-.... +..+++.+..|+..+...+....+.+...+++.++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~-g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGK-DASVALYLGNTPDH--PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChHH--HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 5788877765554443 346766 88888888755432 34467888899999988777899999999999999888
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
+..
T Consensus 123 i~~ 125 (541)
T TIGR03205 123 ITS 125 (541)
T ss_pred EEe
Confidence 754
No 216
>PRK07867 acyl-CoA synthetase; Validated
Probab=76.50 E-value=28 Score=29.48 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=57.1
Q ss_pred EechHHHHHHHHHhhhhc----CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 110 FLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~----~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
.+|...+.......+..+ +..+ ++++...+|-.- .....+++.+..|+.++...+...++++...+++.++..
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~-~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTR-PPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQL 104 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCC-CCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeE
Confidence 588888877666555443 3444 666666665322 234447889999999998878889999999999999999
Q ss_pred EeccC
Q psy13808 186 YLTKD 190 (190)
Q Consensus 186 l~~t~ 190 (190)
++..|
T Consensus 105 li~~~ 109 (529)
T PRK07867 105 VLTES 109 (529)
T ss_pred EEECH
Confidence 88754
No 217
>PRK08308 acyl-CoA synthetase; Validated
Probab=76.28 E-value=37 Score=27.59 Aligned_cols=77 Identities=6% Similarity=0.040 Sum_probs=54.4
Q ss_pred EechHHHHHHHHHhhh--hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEe
Q psy13808 110 FLTHYNLINNSNFIGK--RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~--~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~ 187 (190)
.+|.+.+.......+. ..++.+ ++++...++-... +...+++.+..|+..+..++....+.+...+++.++..+.
T Consensus 8 ~~ty~el~~~~~~~a~~l~~~~~~-g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 84 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQFQEAA-GNRFAVCLKDPFD--IITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLL 84 (414)
T ss_pred eecHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCChH--HHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEE
Confidence 4667766665544333 234554 7887777665443 3455788889999999887778888899999999998877
Q ss_pred cc
Q psy13808 188 TK 189 (190)
Q Consensus 188 ~t 189 (190)
..
T Consensus 85 ~~ 86 (414)
T PRK08308 85 YG 86 (414)
T ss_pred ec
Confidence 54
No 218
>PRK06060 acyl-CoA synthetase; Validated
Probab=75.33 E-value=30 Score=30.54 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=64.3
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++. + . .+|.+.+......++. ..++.+ ++++...++-...+ +..+++.+..|+..+..
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~-g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi 85 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSS-GDRVLLCLPDSPDL--VQLLLACLARGVMAFLA 85 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHHH--HHHHHHHHHhCcEEEec
Confidence 467777652 2 1 4788888766655443 346776 88888888765543 44478899999988888
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+..+++...+++.++..++..
T Consensus 86 ~p~~~~~~l~~~l~~~~~~~vi~~ 109 (705)
T PRK06060 86 NPELHRDDHALAARNTEPALVVTS 109 (705)
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEc
Confidence 778889999999999988887653
No 219
>PRK07638 acyl-CoA synthetase; Validated
Probab=74.33 E-value=35 Score=28.28 Aligned_cols=90 Identities=14% Similarity=0.005 Sum_probs=62.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcC--CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLE--FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
..|+.++++. . + -.+|...+.......+..+. ... ++++...++-.-. ++..+++.+..|+..+..
T Consensus 13 ~~p~~~a~~~-~-~-------~~~Ty~~l~~~~~~~a~~L~~~~~~-~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l 80 (487)
T PRK07638 13 LQPNKIAIKE-N-D-------RVLTYKDWFESVCKVANWLNEKESK-NKTIAILLENRIE--FLQLFAGAAMAGWTCVPL 80 (487)
T ss_pred hCCCCeEEec-C-C-------cEeeHHHHHHHHHHHHHHHHHhCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCeEEEec
Confidence 3567777543 1 1 25788887766655544331 123 6777766665433 345578899999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++...++++.+.+++.++..++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~vi~~ 104 (487)
T PRK07638 81 DIKWKQDELKERLAISNADMIVTE 104 (487)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEe
Confidence 778899999999999999988764
No 220
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=73.48 E-value=36 Score=30.10 Aligned_cols=78 Identities=8% Similarity=0.093 Sum_probs=58.6
Q ss_pred eEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 109 AFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
..+|.+.+......++. ..++.+ +|++...++=..- ++...++.+..|+..|...+.+.++.+...+++-++..
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~-gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNK-EERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 34788888776665544 347777 8888777764433 23446888999999998778899999999999999988
Q ss_pred Eecc
Q psy13808 186 YLTK 189 (190)
Q Consensus 186 l~~t 189 (190)
++..
T Consensus 182 li~~ 185 (696)
T PLN02387 182 VICD 185 (696)
T ss_pred EEEC
Confidence 8753
No 221
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.46 E-value=57 Score=27.85 Aligned_cols=93 Identities=5% Similarity=-0.055 Sum_probs=65.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh----cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR----LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..|+.++++.. + . ..-.+|...+.......+.. .++.+ +|++...++-.... +..+++.+..|+..+
T Consensus 22 ~~~~~~a~~~~-~----~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~-gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v 92 (576)
T PRK05620 22 VHGDTTVTTWG-G----A-EQEQTTFAAIGARAAALAHALHDELGITG-DQRVGSMMYNCAEH--LEVLFAVACMGAVFN 92 (576)
T ss_pred hCCCceEEEEc-C----C-ceEEEeHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEEeCCCHHH--HHHHHHHHhcCCEEe
Confidence 46677775532 1 1 13457888887666555442 46666 78888877754433 344788899999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++.+...++..++..++..
T Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~~i~~ 118 (576)
T PRK05620 93 PLNKQLMNDQIVHIINHAEDEVIVAD 118 (576)
T ss_pred ecccccCHHHHHHHHhccCCcEEEEC
Confidence 88788899999999999999888753
No 222
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=72.26 E-value=35 Score=29.97 Aligned_cols=96 Identities=8% Similarity=-0.041 Sum_probs=65.3
Q ss_pred CCCCeEEEEe--cCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 89 NCRDGINIQF--TSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 89 ~~~~~~~i~~--TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
.|+.+++..- ..|..|.- ..+|.+.+......++.. .++.+ +|++...++-..- .+...++.+..|+..|
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--w~~~~lA~~~~G~v~v 129 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEP-GSRVGIYGSNCPQ--WIVAMEACAAHSLICV 129 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCeEE
Confidence 4566665432 22333321 246888777766555443 46776 8888777765433 2344688899999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++++...++.-++..++..
T Consensus 130 pl~~~~~~~~l~~il~~~~~~~v~~~ 155 (660)
T PLN02430 130 PLYDTLGPGAVDYIVDHAEIDFVFVQ 155 (660)
T ss_pred EeccCCCHHHHHHHHhccCCCEEEEC
Confidence 88788999999999999999988764
No 223
>PRK05850 acyl-CoA synthetase; Validated
Probab=72.19 E-value=61 Score=27.63 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=63.6
Q ss_pred CCCCCeEEEEecCCCCCCCc--eeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPK--AAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PK--gv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
..|+.++++..... +.++ .-.+|...+......++..+ + .+ +|++...++-... ++..+++.+..|+..
T Consensus 13 ~~p~~~a~~~~~~~--~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~-gd~V~l~~~n~~~--~~~~~lA~~~~G~v~ 86 (578)
T PRK05850 13 LQPDDAAFTFIDYE--QDPAGVAETLTWSQLYRRTLNVAEELRRHG-ST-GDRAVILAPQGLE--YIVAFLGALQAGLIA 86 (578)
T ss_pred cCCCceEEEEEccC--CCCCCceeeecHHHHHHHHHHHHHHHHHhC-CC-CCEEEEEcCCccc--HHHHHHHHHHcCceE
Confidence 46677776543211 1122 24688888876665544433 3 34 7888888885543 344478889999999
Q ss_pred EEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+..++ ....+++...+++.++..++..
T Consensus 87 vpl~~~~~~~~~~~l~~~l~~~~~~~il~~ 116 (578)
T PRK05850 87 VPLSVPQGGAHDERVSAVLRDTSPSVVLTT 116 (578)
T ss_pred EecCCCCccchHHHHHHHHHhcCCCEEEEc
Confidence 88853 3467889999999999888764
No 224
>PRK06145 acyl-CoA synthetase; Validated
Probab=71.19 E-value=49 Score=27.49 Aligned_cols=77 Identities=5% Similarity=-0.109 Sum_probs=56.2
Q ss_pred EechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+.. .++.+ ++++...++-.-. ....+++.+..|+..+...+.+..+.+...+++.++..+
T Consensus 27 ~~ty~el~~~v~~~a~~L~~~g~~~-~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHARGIGQ-GDVVALLMKNSAA--FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLL 103 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEE
Confidence 47777777666554443 35666 7887777664432 344478889999999988778899999999999999887
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
...
T Consensus 104 i~~ 106 (497)
T PRK06145 104 LVD 106 (497)
T ss_pred EEc
Confidence 653
No 225
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.77 E-value=42 Score=28.38 Aligned_cols=77 Identities=8% Similarity=-0.039 Sum_probs=56.6
Q ss_pred EechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|...+.......+.. .++.+ +|++...+|-.... ...+++.+..|+..+...+.+.++++-..+++.++..+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~-~d~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEP-GDRVGTLAWNGYRH--LEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHHH--HHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEE
Confidence 47888887665554443 46776 88888887755432 33367888899999988778899999999999998877
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
..+
T Consensus 116 ~~~ 118 (539)
T PRK07008 116 LFD 118 (539)
T ss_pred EEc
Confidence 543
No 226
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=70.64 E-value=57 Score=30.46 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=66.0
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
...|++++++.. .| -.+|.+.+.......+..+ ...+ +|++...+|-.... ...+++.+..|+..+.
T Consensus 626 ~~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~-g~~V~i~~~n~~~~--~~~~la~~~~G~v~v~ 694 (1146)
T PRK08633 626 KRNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKD-EENVGILLPPSVAG--ALANLALLLAGKVPVN 694 (1146)
T ss_pred HhcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCC-CCeEEEECCCchHH--HHHHHHHHHcCCEEEE
Confidence 346788887532 22 2578888776665554433 2344 88888888765543 3447889999999988
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+...++++...+++.+++.++..
T Consensus 695 l~~~~~~~~~~~~l~~~~~~~vi~~ 719 (1146)
T PRK08633 695 LNYTASEAALKSAIEQAQIKTVITS 719 (1146)
T ss_pred eCCCcCHHHHHHHHHHcCCCEEEEc
Confidence 8778899999999999999988753
No 227
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=68.76 E-value=44 Score=31.75 Aligned_cols=77 Identities=4% Similarity=0.015 Sum_probs=59.2
Q ss_pred EechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 110 FLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
.+|.+.+.......+.. .+..+ ++++...++-... .+..+++.+..|+..+..++.+..+++...++..++..+
T Consensus 483 ~~Ty~eL~~~~~~la~~L~~~g~~~-g~~V~l~~~~~~~--~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~ 559 (1296)
T PRK10252 483 QFSYREMREQVVALANLLRERGVKP-GDSVAVALPRSVF--LTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLL 559 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEE
Confidence 47888887766555543 36666 8888877776544 345578999999999998778888999999999999888
Q ss_pred ecc
Q psy13808 187 LTK 189 (190)
Q Consensus 187 ~~t 189 (190)
...
T Consensus 560 i~~ 562 (1296)
T PRK10252 560 ITT 562 (1296)
T ss_pred EEC
Confidence 754
No 228
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=68.07 E-value=3.9 Score=35.52 Aligned_cols=31 Identities=23% Similarity=0.115 Sum_probs=25.4
Q ss_pred CCCCCeEEEEecCCCCC-CCceeEechHHHHH
Q psy13808 88 LNCRDGINIQFTSGTTG-HPKAAFLTHYNLIN 118 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG-~PKgv~~sh~~~~~ 118 (190)
.-++.+.+..-|||||| ++|-+.+++..+-.
T Consensus 98 L~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 98 LCSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred cCCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 34666778999999997 69999999987654
No 229
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=68.04 E-value=32 Score=23.66 Aligned_cols=46 Identities=11% Similarity=0.029 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|........-..|..++.......++++.+.++++++.++..
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~l 60 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILV 60 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 6888865544444578999999966789999999999999988764
No 230
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=67.92 E-value=80 Score=27.28 Aligned_cols=96 Identities=19% Similarity=0.136 Sum_probs=62.3
Q ss_pred CCCCeEEEEec--CCCCCCCceeEechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFT--SGTTGHPKAAFLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++.++++.-. .+++|. ...+|...+......++..+ .+.+ +|++...++-... ++..+++.+..|+..+.
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~-gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGP-GDRVAILAPQGID--YVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCC-CCEEEEECCCChh--HHHHHHHHHHcCceeEe
Confidence 56777765432 112232 33578888776665544333 2455 8888888886654 34457888999998876
Q ss_pred c-CCCCC--hHHHHHHHHHCCceEEecc
Q psy13808 165 P-APSFK--PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~-~~~~~--~~~~~~~i~~~~iT~l~~t 189 (190)
. ++.+. ++++...+++.++..++..
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~ 149 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTT 149 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEc
Confidence 5 23333 7889999999998887754
No 231
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=65.56 E-value=36 Score=22.39 Aligned_cols=46 Identities=13% Similarity=0.069 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|..+.-..--..|..++.......++++.+.++++++.++..
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~i 56 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGL 56 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 5777765422222247888888766788999999999999987654
No 232
>PRK09192 acyl-CoA synthetase; Validated
Probab=65.38 E-value=74 Score=27.22 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=55.6
Q ss_pred eEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC-------hHHHHHHH
Q psy13808 109 AFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK-------PMDSLRAI 178 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~-------~~~~~~~i 178 (190)
-.+|...+.......+. ..++.+ +|++...++-.-. +...+++.+..|+..+..+..+. .+++...+
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~-gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i 124 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKP-GDRVALIAETDGD--FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGML 124 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCchh--HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHH
Confidence 45888887765554443 346776 8888888886443 34447888999999888743222 57899999
Q ss_pred HHCCceEEecc
Q psy13808 179 AKEKCMEYLTK 189 (190)
Q Consensus 179 ~~~~iT~l~~t 189 (190)
++.++..++..
T Consensus 125 ~~~~~~~il~~ 135 (579)
T PRK09192 125 ASAQPAAIITP 135 (579)
T ss_pred HhcCCCEEEeC
Confidence 99999888764
No 233
>PF11040 DGF-1_C: Dispersed gene family protein 1 of Trypanosoma cruzi C-terminus ; InterPro: IPR021053 Dispersed gene family protein 1 of Trypanosoma cruzi is likely to be highly expressed, and is expressed from the sub-telomeric region []. However, its function is not known. This entry represents the C-terminal domain on this protein.
Probab=64.29 E-value=4.7 Score=24.53 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=23.3
Q ss_pred HHHHHhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCC
Q psy13808 66 LSDIMQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTG 104 (190)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG 104 (190)
++.++..+.+.. .....|.+....-|.||||+
T Consensus 19 LeALLrDdeesd-------Eetqkphd~tsssyAsgtt~ 50 (87)
T PF11040_consen 19 LEALLRDDEESD-------EETQKPHDMTSSSYASGTTV 50 (87)
T ss_pred HHHHhccccccc-------hhhcchhhhccccccCCcee
Confidence 566666655443 24567888888999999997
No 234
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=64.26 E-value=70 Score=28.34 Aligned_cols=80 Identities=10% Similarity=0.109 Sum_probs=59.2
Q ss_pred ceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCc
Q psy13808 107 KAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKC 183 (190)
Q Consensus 107 Kgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~i 183 (190)
+...+|.+.+......++.. .++.+ +|++...++-..- .+...++.+..|+..+.....+.++++...+++.++
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 194 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTK-GSNVAIYEETRWE--WLASIYGIWSQSMVAATVYANLGEDALAYALRETEC 194 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCc
Confidence 35678888888766655543 47776 8888877775433 344578888999888877677899999999999888
Q ss_pred eEEecc
Q psy13808 184 MEYLTK 189 (190)
Q Consensus 184 T~l~~t 189 (190)
..++..
T Consensus 195 ~~lv~~ 200 (700)
T PTZ00216 195 KAIVCN 200 (700)
T ss_pred cEEEEC
Confidence 887653
No 235
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=61.31 E-value=53 Score=29.12 Aligned_cols=77 Identities=17% Similarity=0.073 Sum_probs=57.1
Q ss_pred EechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEe
Q psy13808 110 FLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~ 187 (190)
.+|.+.+.......+..+ ...+ +|++...+|=.... +..+++.+..|+..+...+.+.++++...+++-++..++
T Consensus 231 ~~Ty~el~~~~~~lA~~L~~~~~~-gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi 307 (718)
T PRK08043 231 PDSYRKLLKKTLFVGRILEKYSVE-GERIGLMLPNATIS--AAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIF 307 (718)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCcHHH--HHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEE
Confidence 478887776665544433 1344 89998888866543 444788888999888876778999999999999998887
Q ss_pred cc
Q psy13808 188 TK 189 (190)
Q Consensus 188 ~t 189 (190)
..
T Consensus 308 ~~ 309 (718)
T PRK08043 308 TS 309 (718)
T ss_pred Ec
Confidence 54
No 236
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=57.48 E-value=3 Score=31.16 Aligned_cols=28 Identities=14% Similarity=0.048 Sum_probs=22.6
Q ss_pred cccccccCCCCCCccchhhhhhccCCCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPGRE 37 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~~~ 37 (190)
++||.+||-|..+++++..+++..+-.-
T Consensus 43 ~pGD~l~V~P~N~~~~V~~~l~~lgl~~ 70 (219)
T PF00667_consen 43 QPGDHLGVYPPNDPEEVERLLKRLGLDP 70 (219)
T ss_dssp -TT-EEEEE-SSEHHHHHHHHHHHTSGT
T ss_pred cCCCEEEEEccCCHHHHHHHHHHhCCCc
Confidence 6899999999999999999998887654
No 237
>KOG1177|consensus
Probab=56.64 E-value=1.1e+02 Score=26.32 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=57.5
Q ss_pred eeEechHHHHHHHHHhh---hhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCce
Q psy13808 108 AAFLTHYNLINNSNFIG---KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCM 184 (190)
Q Consensus 108 gv~~sh~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT 184 (190)
|+-+|.+.+......++ ..+|+.. +|++....|=+... ..+ .+++...|..++...|.+..+++.-.+++.++-
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~k-GDrVgvwgpN~~~w-~l~-~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k 151 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKK-GDRVGVWGPNSYEW-VLC-QLACARAGLVLVNLNPAYQSEELRYVLKKVGCK 151 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCC-CCEEEEecCChHHH-HHH-HHHHHHhceEEeccCcccccHHHHHHHhhcCeE
Confidence 44578888887665554 3458887 99999888854332 234 567778888888886778888888999999998
Q ss_pred EEec
Q psy13808 185 EYLT 188 (190)
Q Consensus 185 ~l~~ 188 (190)
.++.
T Consensus 152 ~l~~ 155 (596)
T KOG1177|consen 152 ALFA 155 (596)
T ss_pred EEEc
Confidence 8764
No 238
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=55.92 E-value=1e+02 Score=29.02 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=56.7
Q ss_pred EechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEe
Q psy13808 110 FLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYL 187 (190)
Q Consensus 110 ~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~ 187 (190)
.+|.+.+.......+..+ +..+ +|++...+|-.-.. ...+++.+..|+..+...++..++++...+++-++..++
T Consensus 658 ~~Ty~el~~~~~~lA~~L~~g~~~-gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi 734 (1140)
T PRK06814 658 PLTYRKLLTGAFVLGRKLKKNTPP-GENVGVMLPNANGA--AVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVL 734 (1140)
T ss_pred ccCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEcCCchHH--HHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEE
Confidence 478888776655444332 5555 88888777755443 444788899999888776788999999999999999887
Q ss_pred cc
Q psy13808 188 TK 189 (190)
Q Consensus 188 ~t 189 (190)
..
T Consensus 735 ~~ 736 (1140)
T PRK06814 735 TS 736 (1140)
T ss_pred ec
Confidence 53
No 239
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=53.33 E-value=1.2e+02 Score=27.30 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=64.4
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh------cCCcCCC-----------cEEEEeCCchhHHHHHH
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR------LEFDKTD-----------HKILLQVPMFHTFGTAM 150 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~------~~~~~~~-----------~~~l~~~pl~h~~g~~~ 150 (190)
..|+.++++.... |.+ -..+|.+.+......++.. .|+.+ + |++...++=..- .+.
T Consensus 73 ~~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~-g~~~~~~~~g~~d~V~i~~~N~~e--w~~ 145 (746)
T PTZ00342 73 LNNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPE-KKYNEEQNNGKFKLLGLYGSNSIN--WLV 145 (746)
T ss_pred hcCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCc-CccccccccccccEEEEEcCCCHH--HHH
Confidence 3567777653322 211 1357888777666554432 25665 4 777776664332 234
Q ss_pred HHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 151 GILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..++++..|+..|...+.+.++++...+++-++.+++.
T Consensus 146 ~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~ 183 (746)
T PTZ00342 146 ADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCL 183 (746)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEE
Confidence 46888999999998878899999999999999998875
No 240
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=50.94 E-value=78 Score=23.20 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|..+.-..--..|..++.......++++.+.++++++.++..
T Consensus 96 ~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~l 141 (197)
T TIGR02370 96 VHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTG 141 (197)
T ss_pred hhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 7888866533444468999998877889999999999999988754
No 241
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=50.21 E-value=82 Score=23.48 Aligned_cols=56 Identities=16% Similarity=0.041 Sum_probs=41.2
Q ss_pred CcEEEEeCC-chhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 133 DHKILLQVP-MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 133 ~~~~l~~~p-l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
..+++...+ =.|..|..+.-..--..|..++....+..++++.+.++++++.++..
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~l 145 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGL 145 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 344444444 37888865533444478999999977889999999999999988754
No 242
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=49.63 E-value=76 Score=21.12 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|..+....--..|..++.......++++.+.++++++.++..
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~i 56 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGL 56 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 4677755533444467888888866678889999999999887654
No 243
>KOG1175|consensus
Probab=45.62 E-value=2.2e+02 Score=25.26 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHH---HHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNS---NFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~---~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
..+.++++.--=++.+.+- .+...+.... ......+++.. +|++...+|+.=-. +...++....|+-....
T Consensus 78 ~~~~~a~~~~~~~~~~~~~---~t~~el~~~v~~~a~~l~~~g~~k-GD~V~~~mPm~~e~--~ia~lA~~r~Gai~~~v 151 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEV---WTYKELLDQVVRLANVLRKCGLKK-GDTVAIYMPMIPEA--VIAMLACARIGAIHSSV 151 (626)
T ss_pred CCCCcEEEEEecCCCceEE---EEHHHHHHHHHHHHHHHHhcCCCC-CcEEEEeccCChHH--HHHHHHHhhcCeEEEEe
Confidence 3556666666555555554 4554444322 22233667776 99999999986543 34456677777776666
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
...|++..++.-++.-++..++..|
T Consensus 152 ~~~fs~~~l~~Rl~~~~~k~i~t~d 176 (626)
T KOG1175|consen 152 FAGFSAKELLDRLQDSKAKVIITQD 176 (626)
T ss_pred eccCCHHHHHHHHHhcCCCEEEEEe
Confidence 5789999999999999999888766
No 244
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.52 E-value=1.8e+02 Score=24.52 Aligned_cols=78 Identities=10% Similarity=-0.022 Sum_probs=48.4
Q ss_pred eeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHH-------HHH
Q psy13808 108 AAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDS-------LRA 177 (190)
Q Consensus 108 gv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~-------~~~ 177 (190)
+..+|...+.......+. ..++.+ +|++....+-...+ +..+++.+..|+.++...+....+++ ...
T Consensus 27 ~~~~ty~el~~~v~~~a~~L~~~g~~~-gd~V~l~~~~~~~~--~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~ 103 (545)
T PRK07768 27 PVRHTWGEVHERARRIAGGLAAAGVGP-GDAVAVLAGAPVEI--APTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRV 103 (545)
T ss_pred ceEecHHHHHHHHHHHHHHHHHhCCCC-CCEEEEECCCchHH--HHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHH
Confidence 456788887765554443 347776 88888877755443 34478888899877766444443333 334
Q ss_pred HHHCCceEEec
Q psy13808 178 IAKEKCMEYLT 188 (190)
Q Consensus 178 i~~~~iT~l~~ 188 (190)
+++.++..++.
T Consensus 104 ~~~~~~~~v~~ 114 (545)
T PRK07768 104 IGMIGAKAVVV 114 (545)
T ss_pred HHhCCCCEEEe
Confidence 55566655554
No 245
>PF07538 ChW: Clostridial hydrophobic W; InterPro: IPR006637 This hydrophobic repeat is found in a number of Chlostridium proteins. It contains a conserved tryptophan residue.
Probab=43.33 E-value=16 Score=18.77 Aligned_cols=12 Identities=42% Similarity=0.379 Sum_probs=9.4
Q ss_pred cCCCCCCCceeE
Q psy13808 99 TSGTTGHPKAAF 110 (190)
Q Consensus 99 TSGTTG~PKgv~ 110 (190)
++||+|..|.+.
T Consensus 16 ~aGt~G~~~rlE 27 (36)
T PF07538_consen 16 TAGTTGQGLRLE 27 (36)
T ss_pred ecccCCCCcEEE
Confidence 589999987764
No 246
>cd06199 SiR Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain.
Probab=42.40 E-value=10 Score=30.68 Aligned_cols=27 Identities=11% Similarity=-0.124 Sum_probs=23.9
Q ss_pred CcccccccCCCCCCccchhhhhhccCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
=++||.++|-|.++++++..+|+..+.
T Consensus 31 y~~GD~l~i~p~N~~~~V~~~l~~l~l 57 (360)
T cd06199 31 YEPGDALGVYPTNDPALVDELLAALGL 57 (360)
T ss_pred ccCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 369999999999999999999988754
No 247
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=40.59 E-value=2.2e+02 Score=23.98 Aligned_cols=88 Identities=10% Similarity=-0.003 Sum_probs=54.9
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh---hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK---RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
|+.++++. . +-.+|.+.+.......+. ..++.+ ++++...+|-.-. +...+++.+..|+..+...
T Consensus 37 p~~~a~~~-~--------~~~~Ty~el~~~~~~la~~L~~~g~~~-g~~V~v~~~n~~~--~~~~~la~~~~G~v~v~~~ 104 (536)
T PRK10946 37 SDAIAVIC-G--------ERQFSYRELNQASDNLACSLRRQGIKP-GDTALVQLGNVAE--FYITFFALLKLGVAPVNAL 104 (536)
T ss_pred CCCeEEEe-C--------CCcccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCChHH--HHHHHHHHHHcCeEEecCC
Confidence 77777663 1 124788887766555444 346776 8888887765433 3444678888887544332
Q ss_pred CCCChHHHHHHHHHCCceEEecc
Q psy13808 167 PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 167 ~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
......++...+++.++..++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~li~~ 127 (536)
T PRK10946 105 FSHQRSELNAYASQIEPALLIAD 127 (536)
T ss_pred ccccHHHHHHHHhhcCCCEEEEe
Confidence 23445667788888887777653
No 248
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.85 E-value=2.5e+02 Score=24.34 Aligned_cols=96 Identities=15% Similarity=0.080 Sum_probs=59.6
Q ss_pred CCCCeEEEEec--CCCCCCCceeEechHHHHHHHHHhhhhc--CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFT--SGTTGHPKAAFLTHYNLINNSNFIGKRL--EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~~--~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.++.++++... ++..|. .-.+|.+.+......++..+ .+.+ +|++...++-... ++..+++.+..|+.++.
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~-gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vp 108 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKP-GDRVAILAPQNLD--YLIAFFGALYAGRIAVP 108 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCC-CCEEEEEcCCChH--HHHHHHHHHHcCCEEEe
Confidence 55667755432 122222 23578888877665544333 1444 8888888776543 34447888999988775
Q ss_pred c-CCCC--ChHHHHHHHHHCCceEEecc
Q psy13808 165 P-APSF--KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~-~~~~--~~~~~~~~i~~~~iT~l~~t 189 (190)
. .+.. .++++...+++.++..++..
T Consensus 109 l~~~~~~~~~~~l~~~l~~~~~~~vi~~ 136 (631)
T PRK07769 109 LFDPAEPGHVGRLHAVLDDCTPSAILTT 136 (631)
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEEC
Confidence 5 2222 25678888999888877654
No 249
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR). NADPH cytochrome p450 reductase serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a la
Probab=39.85 E-value=12 Score=30.46 Aligned_cols=27 Identities=4% Similarity=-0.202 Sum_probs=24.1
Q ss_pred cccccccCCCCCCccchhhhhhccCCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPGR 36 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~~ 36 (190)
++||.++|-|.++++++..+|+..+..
T Consensus 31 ~~GD~l~v~P~N~~~~V~~~l~~l~l~ 57 (384)
T cd06206 31 RAGDYLAVLPRNPPELVRRALRRFGLA 57 (384)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence 699999999999999999999887543
No 250
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=37.98 E-value=1.1e+02 Score=19.78 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=31.8
Q ss_pred CchhHHHHHHHHHHHHHh-CCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 141 PMFHTFGTAMGILNAMNH-GSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 141 pl~h~~g~~~~~~~~l~~-G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.-.|..|+.+ +...+-. |..+.+.+...+.+.+.+.++++++..+..
T Consensus 10 ~~~~~lGl~~-la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~i 57 (121)
T PF02310_consen 10 GEVHPLGLLY-LAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGI 57 (121)
T ss_dssp TSSTSHHHHH-HHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEE
T ss_pred CcchhHHHHH-HHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 3345666444 5555544 888887755567799999999998887654
No 251
>PHA00736 hypothetical protein
Probab=37.35 E-value=23 Score=20.95 Aligned_cols=24 Identities=17% Similarity=0.450 Sum_probs=18.9
Q ss_pred EEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 137 LLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 137 l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
+.++|+||..+.++++.+.+..|+
T Consensus 52 mdflplfwgi~vifgliag~vlgg 75 (79)
T PHA00736 52 MDFLPLFWGITVIFGLIAGLVLGG 75 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 457899999888888887777665
No 252
>smart00728 ChW Clostridial hydrophobic, with a conserved W residue, domain.
Probab=35.93 E-value=22 Score=19.53 Aligned_cols=12 Identities=25% Similarity=0.235 Sum_probs=9.4
Q ss_pred cCCCCCCCceeE
Q psy13808 99 TSGTTGHPKAAF 110 (190)
Q Consensus 99 TSGTTG~PKgv~ 110 (190)
++||+|..+-+.
T Consensus 17 ~aGT~G~~lriE 28 (46)
T smart00728 17 IAGTVGQGLRIE 28 (46)
T ss_pred EcccCCCCceeE
Confidence 689999987654
No 253
>PRK07868 acyl-CoA synthetase; Validated
Probab=33.51 E-value=4.1e+02 Score=24.92 Aligned_cols=87 Identities=13% Similarity=0.108 Sum_probs=59.3
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++ +.. -.+|.+.+......++.. .++.+ +|++...++-.-. .+..+++.+..|+..+
T Consensus 458 ~~~pd~~Al~-~~~--------~~lTY~eL~~ra~rlA~~L~~~Gv~~-Gd~VaI~~~n~~e--~v~a~lA~~~aGav~v 525 (994)
T PRK07868 458 RDAPKGEFLL-FDG--------RVHTYEAVNRRINNVVRGLIAVGVRQ-GDRVGVLMETRPS--ALVAIAALSRLGAVAV 525 (994)
T ss_pred HHCCCCeEEE-eCC--------ceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHhcCCEEE
Confidence 3467777754 321 257888888766655543 36776 8888888775433 2444788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEec
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
...+. ..+...++.-++..++.
T Consensus 526 pl~p~---~~l~~il~~s~~~~li~ 547 (994)
T PRK07868 526 LMPPD---TDLAAAVRLGGVTEIIT 547 (994)
T ss_pred EeCCc---hhHHHHHhccCCeEEEE
Confidence 88542 56777888888877764
No 254
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced fe
Probab=32.27 E-value=18 Score=29.45 Aligned_cols=26 Identities=12% Similarity=-0.066 Sum_probs=23.3
Q ss_pred cccccccCCCCCCccchhhhhhccCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
++||.++|-|.++++++..+|+..+.
T Consensus 32 ~~GD~l~v~p~N~~~~V~~~l~~l~l 57 (382)
T cd06207 32 ETGDNLGIYPENSDALVDEFLARLGL 57 (382)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 69999999999999999999988753
No 255
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=31.87 E-value=3.1e+02 Score=23.05 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=41.5
Q ss_pred CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC---CCCChHHHHHHHHHCCceEEecc
Q psy13808 129 FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA---PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 129 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~---~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++ +|.+++--|-|+..-..+ -..|..++-.+ ++.+++.+-+.++++++..++.+
T Consensus 176 ~~p-Gd~v~vE~PtY~~~~~~~-----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~ 233 (459)
T COG1167 176 LDP-GDTVLVEDPTYPGALQAL-----EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVT 233 (459)
T ss_pred CCC-CCEEEEcCCCcHHHHHHH-----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEEC
Confidence 345 999999999988643322 24577777654 35799999999999999988865
No 256
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=31.26 E-value=1.8e+02 Score=20.04 Aligned_cols=46 Identities=17% Similarity=0.077 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|-..-....-..|..++......+++++++..+++++..+..
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVgl 58 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILV 58 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 4776643322222367889998866679999999999999987653
No 257
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain. The reductase portion is similar in structure to NADPH dependent cytochrome-450 reductase (CYPOR), having an inserted connecting sub-domain within the FAD binding portion of FNR. NOS differs from CYPOR in a requirement for the cofactor tetrahydrobiopterin and unlike most CYPOR is dimeric. Nitric oxide synthase produces nitric oxide in the conversion of L-arginine to L-citruline. NOS has been implicated in a variety of processes including cytotoxicity, anti-inflamation, neurotransmission, and vascular smooth muscle relaxation.
Probab=31.04 E-value=20 Score=29.50 Aligned_cols=26 Identities=12% Similarity=-0.038 Sum_probs=23.3
Q ss_pred CcccccccCCCCCCccchhhhhhccC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRP 34 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~ 34 (190)
=++||.++|-|.++++++..+|+..+
T Consensus 32 Y~~GD~l~V~p~N~~~~V~~~l~~l~ 57 (406)
T cd06202 32 YQPGDHVGIFPANRPELVDALLDRLH 57 (406)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 36999999999999999999998864
No 258
>PF06871 TraH_2: TraH_2; InterPro: IPR010680 This family consists of several TraH proteins, which seem to be specific to Agrobacterium and Rhizobium species. This protein is thought to be involved in conjugal transfer but its function is unknown. This family does not appear to be related to IPR010927 from INTERPRO.
Probab=30.78 E-value=69 Score=23.43 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=22.6
Q ss_pred HHhCCEEEEcCCCCChHHHHHHHHHCC
Q psy13808 156 MNHGSTTVVPAPSFKPMDSLRAIAKEK 182 (190)
Q Consensus 156 l~~G~~vv~~~~~~~~~~~~~~i~~~~ 182 (190)
.-.|.++++.+..-++++.+.++++|=
T Consensus 37 VrsG~R~vLVPkp~tpdeAm~liR~~~ 63 (206)
T PF06871_consen 37 VRSGGRLVLVPKPKTPDEAMALIRQYV 63 (206)
T ss_pred EEECCEEEEecCCCCHHHHHHHHHHhc
Confidence 456899999877789999999999873
No 259
>PRK06214 sulfite reductase; Provisional
Probab=29.91 E-value=24 Score=30.32 Aligned_cols=28 Identities=11% Similarity=-0.110 Sum_probs=24.3
Q ss_pred CcccccccCCCCCCccchhhhhhccCCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPGR 36 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~~ 36 (190)
=++||.++|-|.+++++++++|+..+..
T Consensus 202 Y~~GD~l~V~P~N~~~~V~~~l~~lgl~ 229 (530)
T PRK06214 202 YEVGDSLGLFPANDPALVDAVIAALGAP 229 (530)
T ss_pred cCCCCEEEEeccCCHHHHHHHHHHhCCC
Confidence 3699999999999999999999887544
No 260
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredo
Probab=29.70 E-value=22 Score=29.45 Aligned_cols=27 Identities=7% Similarity=-0.052 Sum_probs=24.0
Q ss_pred cccccccCCCCCCccchhhhhhccCCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPGR 36 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~~ 36 (190)
++||.++|-|.++++++..+|+..+..
T Consensus 39 ~~GD~l~I~p~N~~~~V~~~l~~l~l~ 65 (416)
T cd06204 39 QTGDHLAVWPTNPSEEVERLLKVLGLD 65 (416)
T ss_pred cCCCEEEEEcCCCHHHHHHHHHHhCcC
Confidence 699999999999999999999887554
No 261
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=29.54 E-value=22 Score=23.97 Aligned_cols=31 Identities=10% Similarity=-0.081 Sum_probs=20.6
Q ss_pred CcccccccC--CCCCCccchhhhhhccCCCCCCCCCC
Q psy13808 9 GEKEDRIGE--SQPFRERTLSHQDKIRPGRESNPRPS 43 (190)
Q Consensus 9 ~~~~~~v~i--~p~~~~~~l~~~l~~~~~~~i~~~~~ 43 (190)
.|+||+|=| ...++.+|+ +.-+||+++.+.+
T Consensus 78 ~~~GD~VII~sy~~~~e~e~----~~~~Pkvv~~d~~ 110 (126)
T COG0853 78 VQVGDLVIIMSYAQMSEEEA----KTHKPKVVVVDEK 110 (126)
T ss_pred CCCCCEEEEEEcccCCHHHH----hccCCeEEEECCC
Confidence 467888777 444555555 5667888877766
No 262
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate. In MSR, electrons are transferred from NADPH to FAD to FMN to cob(II)alamin. MSR resembles proteins of the cytochrome p450 family including nitric oxide synthase, the alpha subunit of sulfite reductase, but contains an extended hinge region. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. CYPORs resemble ferredoxin reductase (FNR) but have a connecting subdomain inserted within the flavin binding region, which helps orient the FMN binding doamin with the FNR module. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme
Probab=29.47 E-value=24 Score=29.02 Aligned_cols=25 Identities=20% Similarity=0.104 Sum_probs=22.5
Q ss_pred cccccccCCCCCCccchhhhhhccC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRP 34 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~ 34 (190)
++||.++|-|.++++++..+++..+
T Consensus 32 ~~GD~l~V~p~N~~~~V~~~l~~l~ 56 (398)
T cd06203 32 QPGDTIGILPPNTASEVESLLKRLG 56 (398)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHhC
Confidence 6999999999999999999998753
No 263
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=27.91 E-value=1.3e+02 Score=20.95 Aligned_cols=23 Identities=9% Similarity=0.053 Sum_probs=17.0
Q ss_pred CCChHHHHHHHHHCCceEEeccC
Q psy13808 168 SFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 168 ~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.++..++.+.|.+++-.++.+||
T Consensus 62 ~~~~~evi~~I~~~G~PviVAtD 84 (138)
T PF04312_consen 62 NMSRSEVIEWISEYGKPVIVATD 84 (138)
T ss_pred CCCHHHHHHHHHHcCCEEEEEec
Confidence 46777777777777777777776
No 264
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional
Probab=26.77 E-value=27 Score=30.55 Aligned_cols=26 Identities=8% Similarity=-0.106 Sum_probs=22.9
Q ss_pred CcccccccCCCCCCccchhhhhhccC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRP 34 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~ 34 (190)
=++||.+||.|.++++.+..+|+..+
T Consensus 271 Y~~GD~lgV~P~N~~~~V~~~l~~l~ 296 (600)
T PRK10953 271 YQPGDALGVWYQNDPALVKELVELLW 296 (600)
T ss_pred ccCCCEEEEEcCCCHHHHHHHHHHhC
Confidence 36999999999999999999998753
No 265
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=25.87 E-value=1e+02 Score=17.77 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=16.2
Q ss_pred HHHhCCEEEEcCCCC---ChHHHHHHHHHCCceEEec
Q psy13808 155 AMNHGSTTVVPAPSF---KPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 155 ~l~~G~~vv~~~~~~---~~~~~~~~i~~~~iT~l~~ 188 (190)
+...|...+...+.. ....+.+..+++++.++.+
T Consensus 24 a~~~g~~~v~iTDh~~~~~~~~~~~~~~~~gi~~i~G 60 (67)
T smart00481 24 AKELGLKAIAITDHGNLFGAVEFYKAAKKAGIKPIIG 60 (67)
T ss_pred HHHcCCCEEEEeeCCcccCHHHHHHHHHHcCCeEEEE
Confidence 344555555553322 2234445555555555543
No 266
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=24.88 E-value=47 Score=22.40 Aligned_cols=24 Identities=33% Similarity=0.696 Sum_probs=20.4
Q ss_pred EEEecCCCC-CCCceeEechHHHHH
Q psy13808 95 NIQFTSGTT-GHPKAAFLTHYNLIN 118 (190)
Q Consensus 95 ~i~~TSGTT-G~PKgv~~sh~~~~~ 118 (190)
-..||||.+ ..|-|+|.-|+.+..
T Consensus 80 ~y~YtSg~~l~Tp~G~M~GhY~M~~ 104 (126)
T COG2967 80 EYQYTSGCPLDTPSGTMQGHYEMID 104 (126)
T ss_pred ceEEcCCcCccCCcceEEEEEEEec
Confidence 378999998 899999999986654
No 267
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component. This model describes an NADPH-dependent sulfite reductase flavoprotein subunit. Most members of this family are found in Cys biosynthesis gene clusters. The closest homologs below the trusted cutoff are designated as subunits nitrate reductase.
Probab=24.34 E-value=32 Score=30.03 Aligned_cols=27 Identities=15% Similarity=-0.080 Sum_probs=23.6
Q ss_pred CcccccccCCCCCCccchhhhhhccCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
=++||.++|.|.++++.+..+|+..+.
T Consensus 268 Y~~GD~l~V~P~N~~~~V~~~l~~l~l 294 (597)
T TIGR01931 268 YEPGDALGVWYKNDPALVKEILKLLNL 294 (597)
T ss_pred cCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 369999999999999999999988654
No 268
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=23.51 E-value=33 Score=23.28 Aligned_cols=31 Identities=3% Similarity=-0.152 Sum_probs=21.3
Q ss_pred CcccccccC--CCCCCccchhhhhhccCCCCCCCCCC
Q psy13808 9 GEKEDRIGE--SQPFRERTLSHQDKIRPGRESNPRPS 43 (190)
Q Consensus 9 ~~~~~~v~i--~p~~~~~~l~~~l~~~~~~~i~~~~~ 43 (190)
.++||+|=| ...++++|+ +.-+|++++++..
T Consensus 79 ~~~GD~VII~sy~~~~~~e~----~~~~P~vv~vd~~ 111 (126)
T TIGR00223 79 VSVGDIVIIASYVTMPDEEA----RTHRPNVAYFEGD 111 (126)
T ss_pred CCCCCEEEEEECCcCCHHHH----hcCCCEEEEECCC
Confidence 578998877 334445544 4478888888866
No 269
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=22.12 E-value=3.2e+02 Score=23.36 Aligned_cols=49 Identities=6% Similarity=0.070 Sum_probs=32.4
Q ss_pred CcEEEEeCCchhHHH-HHHHHHHHHHhCCEEEEcCCCCCh---HHHHHHHHHC
Q psy13808 133 DHKILLQVPMFHTFG-TAMGILNAMNHGSTTVVPAPSFKP---MDSLRAIAKE 181 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g-~~~~~~~~l~~G~~vv~~~~~~~~---~~~~~~i~~~ 181 (190)
--+++...|+.+-.. .++.+..+|..|.++|+-+....| ..+.+++++.
T Consensus 168 ~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 220 (511)
T TIGR01237 168 RGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEA 220 (511)
T ss_pred ceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 456777888776443 345788999999999997554433 3455555553
No 270
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=21.27 E-value=4e+02 Score=22.82 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=31.9
Q ss_pred CcEEEEeCCchhHHH-HHHHHHHHHHhCCEEEEcCCCCCh---HHHHHHHHHC
Q psy13808 133 DHKILLQVPMFHTFG-TAMGILNAMNHGSTTVVPAPSFKP---MDSLRAIAKE 181 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g-~~~~~~~~l~~G~~vv~~~~~~~~---~~~~~~i~~~ 181 (190)
.-+++...|+.+-.. .+..+..+|..|.++++-+....| ..+.+++++.
T Consensus 168 ~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea 220 (518)
T cd07125 168 RGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA 220 (518)
T ss_pred ccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc
Confidence 345667777655322 245678899999999987544443 5566666664
No 271
>PF08679 DsrD: Dissimilatory sulfite reductase D (DsrD); InterPro: IPR014793 The structure of the dissimilatory sulphite reductase D (DsrD) protein has shown it to contain a winged-helix motif similar to those found in DNA binding proteins []. The structure suggests a possible role for DsrD in transcription or translation of genes, which catalyse dissimilatory sulphite reduction. ; PDB: 1WQ2_B 1UCR_B.
Probab=21.11 E-value=40 Score=20.13 Aligned_cols=11 Identities=27% Similarity=0.223 Sum_probs=8.4
Q ss_pred EEEEecCCCCC
Q psy13808 94 INIQFTSGTTG 104 (190)
Q Consensus 94 ~~i~~TSGTTG 104 (190)
-+..++||||-
T Consensus 49 ~l~yWSSGSTT 59 (67)
T PF08679_consen 49 KLEYWSSGSTT 59 (67)
T ss_dssp SEEEEEETTEE
T ss_pred eEEEEcCCCcE
Confidence 35789999983
No 272
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=20.86 E-value=3.7e+02 Score=22.90 Aligned_cols=49 Identities=8% Similarity=0.006 Sum_probs=34.6
Q ss_pred CcEEEEeCCchhHHHH-HHHHHHHHHhCCEEEEcCCCC---ChHHHHHHHHHC
Q psy13808 133 DHKILLQVPMFHTFGT-AMGILNAMNHGSTTVVPAPSF---KPMDSLRAIAKE 181 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g~-~~~~~~~l~~G~~vv~~~~~~---~~~~~~~~i~~~ 181 (190)
--++++..|+.+-..+ .+.+..+|..|.++|+-+... ....+.+++++.
T Consensus 155 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea 207 (500)
T cd07083 155 LGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA 207 (500)
T ss_pred cceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence 4567888888877544 356788999999999986544 344556666665
No 273
>PF13341 RAG2_PHD: RAG2 PHD domain; PDB: 2JWO_A 2V86_B 2V85_B 2V87_A 2V83_C 2V89_A 2V88_A.
Probab=20.76 E-value=30 Score=20.82 Aligned_cols=7 Identities=43% Similarity=0.800 Sum_probs=3.5
Q ss_pred CcccccC
Q psy13808 1 MVLSSRN 7 (190)
Q Consensus 1 ~~~~~~~ 7 (190)
|.|||++
T Consensus 30 MI~cs~~ 36 (78)
T PF13341_consen 30 MIFCSRG 36 (78)
T ss_dssp EEEE-ST
T ss_pred EEEEeCC
Confidence 4566665
No 274
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=20.76 E-value=3.6e+02 Score=23.04 Aligned_cols=49 Identities=12% Similarity=-0.000 Sum_probs=32.8
Q ss_pred CcEEEEeCCchhHHHH-HHHHHHHHHhCCEEEEcCCCC---ChHHHHHHHHHC
Q psy13808 133 DHKILLQVPMFHTFGT-AMGILNAMNHGSTTVVPAPSF---KPMDSLRAIAKE 181 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g~-~~~~~~~l~~G~~vv~~~~~~---~~~~~~~~i~~~ 181 (190)
--+++...|+.+-..+ +..+..+|..|.++++-+... ....+.+++++.
T Consensus 167 ~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 219 (512)
T cd07124 167 LGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA 219 (512)
T ss_pred ceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 4567788887764433 456888999999999975443 344555566654
No 275
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=20.70 E-value=3.6e+02 Score=23.08 Aligned_cols=49 Identities=16% Similarity=0.089 Sum_probs=33.8
Q ss_pred CcEEEEeCCchhHHHH-HHHHHHHHHhCCEEEEcCCCC---ChHHHHHHHHHC
Q psy13808 133 DHKILLQVPMFHTFGT-AMGILNAMNHGSTTVVPAPSF---KPMDSLRAIAKE 181 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g~-~~~~~~~l~~G~~vv~~~~~~---~~~~~~~~i~~~ 181 (190)
--+++...|+.+-..+ .+.+..+|..|.++++-+... ....+.+++++.
T Consensus 172 ~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~a 224 (514)
T PRK03137 172 LGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA 224 (514)
T ss_pred CcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 3477888887765443 456789999999999975443 444556666665
No 276
>PLN02242 methionine gamma-lyase
Probab=20.11 E-value=5.1e+02 Score=21.48 Aligned_cols=53 Identities=8% Similarity=-0.018 Sum_probs=30.5
Q ss_pred CcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEE
Q psy13808 133 DHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 133 ~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l 186 (190)
+|.++...|.|...-..+..+..-..|..++.. +..+++.+.+.+++.+...+
T Consensus 115 GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~-d~~d~e~l~~~i~~~~tklV 167 (418)
T PLN02242 115 GGHVVASNTLYGGTHALLAHFLPRKCNITTTFV-DITDLEAVKKAVVPGKTKVL 167 (418)
T ss_pred CCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc-CCCCHHHHHHhcCcCCCEEE
Confidence 888888888764432221111122367777766 44578888777765433333
Done!