Query psy13808
Match_columns 190
No_of_seqs 142 out of 1847
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 21:02:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ry2_A Acetyl-coenzyme A synth 99.9 1.9E-25 6.5E-30 190.3 14.2 166 17-189 169-363 (663)
2 1v25_A Long-chain-fatty-acid-C 99.9 8.2E-25 2.8E-29 182.3 14.4 164 15-189 100-274 (541)
3 1mdb_A 2,3-dihydroxybenzoate-A 99.9 5.5E-25 1.9E-29 183.3 12.3 166 15-189 103-279 (539)
4 3o83_A Peptide arylation enzym 99.9 1.6E-24 5.5E-29 180.7 14.8 167 16-189 109-288 (544)
5 3g7s_A Long-chain-fatty-acid-- 99.9 5E-25 1.7E-29 183.8 11.6 166 15-189 105-275 (549)
6 3rix_A Luciferase, luciferin 4 99.9 1E-24 3.5E-29 182.1 13.1 172 15-189 103-288 (550)
7 2d1s_A Luciferase, luciferin 4 99.9 1.7E-24 5.7E-29 180.7 14.3 167 15-189 105-290 (548)
8 1pg4_A Acetyl-COA synthetase; 99.9 1.2E-24 4.1E-29 185.0 13.1 167 16-189 161-357 (652)
9 3ipl_A 2-succinylbenzoate--COA 99.9 2.6E-24 9E-29 177.6 14.3 173 13-189 74-258 (501)
10 3ivr_A Putative long-chain-fat 99.9 1.1E-24 3.9E-29 180.1 11.4 167 15-189 84-255 (509)
11 3r44_A Fatty acyl COA syntheta 99.9 2.3E-24 8E-29 178.7 11.7 165 15-189 96-265 (517)
12 3nyq_A Malonyl-COA ligase; A/B 99.9 2.5E-24 8.6E-29 178.0 11.7 158 12-189 93-250 (505)
13 3c5e_A Acyl-coenzyme A synthet 99.9 9.2E-24 3.1E-28 177.1 14.7 167 15-189 127-304 (570)
14 1t5h_X 4-chlorobenzoyl COA lig 99.9 1.7E-24 5.7E-29 179.0 9.7 162 16-189 83-251 (504)
15 3ni2_A 4-coumarate:COA ligase; 99.9 7.6E-25 2.6E-29 182.3 7.4 166 15-189 102-278 (536)
16 3e7w_A D-alanine--poly(phospho 99.9 1.4E-23 4.9E-28 173.6 15.0 160 15-189 80-241 (511)
17 2v7b_A Benzoate-coenzyme A lig 99.9 5.9E-24 2E-28 176.6 12.7 168 15-189 101-281 (529)
18 3rg2_A Enterobactin synthase c 99.9 1.9E-23 6.4E-28 176.6 14.9 167 15-189 103-281 (617)
19 3fce_A D-alanine--poly(phospho 99.9 1.7E-23 5.8E-28 173.2 12.8 163 14-189 78-242 (512)
20 4fuq_A Malonyl COA synthetase; 99.9 9.2E-24 3.1E-28 174.6 8.5 165 15-189 81-249 (503)
21 3etc_A AMP-binding protein; ad 99.9 4.4E-23 1.5E-27 173.3 11.9 171 16-189 140-323 (580)
22 3t5a_A Long-chain-fatty-acid-- 99.9 2.2E-23 7.4E-28 170.9 9.3 157 17-186 112-286 (480)
23 3tsy_A Fusion protein 4-coumar 99.9 2.4E-23 8.3E-28 183.9 10.2 169 16-189 142-325 (979)
24 1amu_A GRSA, gramicidin synthe 99.9 8E-23 2.7E-27 171.1 12.3 161 15-189 117-280 (563)
25 4gr5_A Non-ribosomal peptide s 99.9 6.7E-23 2.3E-27 171.8 11.8 157 15-189 153-310 (570)
26 4dg8_A PA1221; ANL superfamily 99.9 8.8E-23 3E-27 172.7 12.0 156 14-189 104-260 (620)
27 3kxw_A Saframycin MX1 syntheta 99.9 8.5E-23 2.9E-27 171.5 10.1 161 16-189 94-267 (590)
28 2vsq_A Surfactin synthetase su 99.9 6.9E-22 2.4E-26 178.9 14.5 162 13-189 540-704 (1304)
29 3l8c_A D-alanine--poly(phospho 99.9 2.3E-21 7.9E-26 160.7 14.2 160 15-189 82-245 (521)
30 3ite_A SIDN siderophore synthe 99.9 1.2E-21 4E-26 163.8 12.2 165 15-189 107-279 (562)
31 3gqw_A Fatty acid AMP ligase; 99.9 5.9E-22 2E-26 165.8 9.3 158 17-189 104-277 (576)
32 4gs5_A Acyl-COA synthetase (AM 99.8 8E-21 2.7E-25 150.9 8.1 96 89-189 35-130 (358)
33 3qov_A Phenylacetate-coenzyme 99.7 5.2E-18 1.8E-22 137.7 10.9 101 87-189 81-185 (436)
34 3hgu_A EHPF; phenazine, antibi 99.7 3.1E-17 1.1E-21 130.4 12.3 99 87-189 87-212 (369)
35 2y4o_A Phenylacetate-coenzyme 99.7 3.2E-17 1.1E-21 133.3 11.3 100 87-189 88-191 (443)
36 2y27_A Phenylacetate-coenzyme 99.7 3.8E-17 1.3E-21 132.6 11.6 100 87-189 86-189 (437)
37 3ivr_A Putative long-chain-fat 94.0 0.86 3E-05 37.0 11.8 90 88-189 18-110 (509)
38 1pg4_A Acetyl-COA synthetase; 93.7 1.4 4.7E-05 37.2 12.7 96 89-190 89-187 (652)
39 3ni2_A 4-coumarate:COA ligase; 93.3 1.2 4.2E-05 36.4 11.6 92 88-189 34-128 (536)
40 3g7s_A Long-chain-fatty-acid-- 93.2 2.1 7E-05 35.2 12.8 97 88-189 31-131 (549)
41 3rix_A Luciferase, luciferin 4 93.0 0.54 1.9E-05 38.7 9.0 94 89-189 33-129 (550)
42 3etc_A AMP-binding protein; ad 93.0 1.7 6E-05 36.0 12.1 96 87-189 67-165 (580)
43 4gr5_A Non-ribosomal peptide s 92.9 1.7 5.7E-05 35.9 11.9 91 87-189 86-179 (570)
44 1ry2_A Acetyl-coenzyme A synth 92.7 1.8 6.2E-05 36.6 11.9 97 88-190 94-194 (663)
45 1v25_A Long-chain-fatty-acid-C 92.6 2.2 7.5E-05 35.0 12.1 94 88-189 30-126 (541)
46 1t5h_X 4-chlorobenzoyl COA lig 92.5 2.5 8.4E-05 34.3 12.2 91 88-188 14-107 (504)
47 3tsy_A Fusion protein 4-coumar 92.3 2.6 8.9E-05 37.3 12.9 92 88-189 73-167 (979)
48 3ipl_A 2-succinylbenzoate--COA 92.3 1.7 5.7E-05 35.2 10.9 89 89-189 14-102 (501)
49 1amu_A GRSA, gramicidin synthe 92.2 2.1 7.2E-05 35.4 11.5 90 88-189 51-143 (563)
50 3o83_A Peptide arylation enzym 92.1 2.3 7.8E-05 34.9 11.6 91 87-189 41-134 (544)
51 4fuq_A Malonyl COA synthetase; 92.0 1.8 6.1E-05 35.2 10.7 78 109-189 27-107 (503)
52 1mdb_A 2,3-dihydroxybenzoate-A 91.9 2.7 9.3E-05 34.4 11.8 90 88-189 37-129 (539)
53 3c5e_A Acyl-coenzyme A synthet 91.9 3.5 0.00012 34.1 12.5 94 89-189 56-153 (570)
54 2v7b_A Benzoate-coenzyme A lig 91.4 1.9 6.4E-05 35.2 10.3 89 89-189 36-127 (529)
55 3r44_A Fatty acyl COA syntheta 91.4 3.1 0.0001 33.9 11.6 92 88-189 28-122 (517)
56 3fce_A D-alanine--poly(phospho 91.1 2.5 8.5E-05 34.3 10.7 90 88-189 13-105 (512)
57 3t5a_A Long-chain-fatty-acid-- 90.8 4.4 0.00015 32.3 11.8 98 88-189 36-139 (480)
58 3l8c_A D-alanine--poly(phospho 90.6 2.8 9.5E-05 34.1 10.6 89 89-189 17-108 (521)
59 3ite_A SIDN siderophore synthe 90.3 4.6 0.00016 33.1 11.7 98 87-189 31-133 (562)
60 4dg8_A PA1221; ANL superfamily 89.6 5.8 0.0002 33.2 12.0 91 87-189 38-131 (620)
61 2d1s_A Luciferase, luciferin 4 89.2 2.7 9.4E-05 34.5 9.6 78 109-189 51-131 (548)
62 3e7w_A D-alanine--poly(phospho 86.6 6.7 0.00023 31.7 10.2 90 88-189 13-106 (511)
63 3rg2_A Enterobactin synthase c 86.5 13 0.00045 30.9 13.4 88 90-189 39-129 (617)
64 3kxw_A Saframycin MX1 syntheta 85.2 11 0.00038 30.9 11.1 93 88-188 23-121 (590)
65 3gqw_A Fatty acid AMP ligase; 84.7 6.8 0.00023 32.0 9.5 79 108-189 47-135 (576)
66 4b2g_A GH3-1 auxin conjugating 81.4 0.31 1.1E-05 41.0 0.1 31 88-118 96-127 (609)
67 3nyq_A Malonyl-COA ligase; A/B 79.5 11 0.00037 30.5 8.8 76 109-189 47-122 (505)
68 2vsq_A Surfactin synthetase su 79.4 17 0.00058 33.3 10.8 90 88-189 476-568 (1304)
69 4epl_A Jasmonic acid-amido syn 75.9 0.63 2.2E-05 38.9 0.4 31 88-118 95-126 (581)
70 4eql_A 4-substituted benzoates 74.7 1.1 3.8E-05 37.5 1.6 31 88-118 90-121 (581)
71 4dql_A Bifunctional P-450/NADP 43.9 6.8 0.00023 31.0 0.8 27 9-35 39-65 (393)
72 1ddg_A Sulfite reductase (NADP 42.3 7.8 0.00027 30.4 1.0 27 10-36 46-72 (374)
73 1f20_A Nitric-oxide synthase; 42.2 8.2 0.00028 30.9 1.1 25 10-34 66-90 (435)
74 3ikb_A Uncharacterized conserv 39.0 8.4 0.00029 27.4 0.6 40 1-41 88-128 (198)
75 3qfs_A CPR, P450R, NADPH--cyto 38.6 9.1 0.00031 31.0 0.8 27 9-35 95-121 (458)
76 3ezx_A MMCP 1, monomethylamine 37.0 80 0.0027 22.4 5.6 46 143-188 104-149 (215)
77 2qtl_A MSR;, methionine syntha 33.6 11 0.00038 31.2 0.6 27 9-35 148-174 (539)
78 2trc_P Phosducin, MEKA, PP33; 33.3 4.5 0.00015 29.1 -1.6 18 99-117 3-20 (217)
79 3qe2_A CPR, P450R, NADPH--cyto 33.2 14 0.00049 31.0 1.2 26 10-35 256-281 (618)
80 1tll_A Nitric-oxide synthase, 30.1 17 0.00057 31.1 1.1 26 9-34 286-311 (688)
81 2bpo_A CPR, P450R, NADPH-cytoc 30.1 14 0.00047 31.5 0.6 28 9-36 292-319 (682)
82 1y80_A Predicted cobalamin bin 28.1 1.2E+02 0.0041 21.1 5.3 46 143-188 100-145 (210)
83 3ghd_A A cystathionine beta-sy 27.0 66 0.0022 18.1 3.1 27 164-190 4-30 (70)
84 1ccw_A Protein (glutamate muta 25.0 1.3E+02 0.0046 19.4 4.8 47 142-188 14-60 (137)
85 2yxb_A Coenzyme B12-dependent 22.0 1.8E+02 0.0063 19.4 6.8 47 142-188 29-75 (161)
86 2eki_A DRG 1, developmentally- 20.7 37 0.0013 20.9 1.1 28 6-33 59-88 (93)
87 1o69_A Aminotransferase; struc 20.5 2.8E+02 0.0097 21.0 8.5 53 129-187 69-127 (394)
No 1
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.93 E-value=1.9e-25 Score=190.25 Aligned_cols=166 Identities=12% Similarity=0.102 Sum_probs=128.3
Q ss_pred CCCCCCccchhhhhhccCCCCCCCCCCCCC--------------CCCCCCCcEEEEeec-----------CcccHHHHHh
Q psy13808 17 ESQPFRERTLSHQDKIRPGRESNPRPSAYK--------------ADALPTKLTRLALRM-----------GTFRLSDIMQ 71 (190)
Q Consensus 17 i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~--------------~~~~~~~~~~i~~~~-----------~~~~~~~l~~ 71 (190)
++|.++++++.+++++++|+++|+++.... ...++..+.++++.. ....|.+++.
T Consensus 169 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (663)
T 1ry2_A 169 VFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKK 248 (663)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEEHHHHHT
T ss_pred eCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCCccccHHHHHh
Confidence 389999999999999999999999876332 122345556655421 1234666655
Q ss_pred cCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHH-HhhhhcCCcCCCcEEEEeCCchhHHHHHH
Q psy13808 72 GAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN-FIGKRLEFDKTDHKILLQVPMFHTFGTAM 150 (190)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~-~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 150 (190)
...... .....+++|+++|+|||||||+||||+++|+++..... .....+++.+ +|++++..|++|..|..+
T Consensus 249 ~~~~~~------~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~g~~~ 321 (663)
T 1ry2_A 249 KYKTYY------PCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQ-EDVFFTAGDIGWITGHTY 321 (663)
T ss_dssp TSCSCC------CCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCS-SCEEEECSCTTSHHHHHH
T ss_pred hcCCCC------CccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCC-CcEEEEcCCcHHhhhhHH
Confidence 322111 12345689999999999999999999999999886653 4455678887 999999999999999767
Q ss_pred HHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 151 GILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 151 ~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+|..|+++++++. .++++.+++.|+++++|+++++
T Consensus 322 ~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 363 (663)
T 1ry2_A 322 VVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVA 363 (663)
T ss_dssp TTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEec
Confidence 78899999999999853 2689999999999999999864
No 2
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=99.92 E-value=8.2e-25 Score=182.33 Aligned_cols=164 Identities=17% Similarity=0.185 Sum_probs=126.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec----CcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~----~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
|++||.++.+++.+++++++++++|++.+... ...++..+.++.+.. +...+++++......
T Consensus 100 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 170 (541)
T 1v25_A 100 HTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEADP--------- 170 (541)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHCCSCCCC---------
T ss_pred EecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHHhhccCCc---------
Confidence 34599999999999999999999999876321 123445555555421 233455554332211
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHh--hhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFI--GKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~--~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
....++++++|+|||||||.||||+++|+++....... ...+++.+ +|++++.+|++|.+++. .++.++..|++++
T Consensus 171 ~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~-~~~~~l~~G~~~v 248 (541)
T 1v25_A 171 VRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSE-KDVVLPVVPMFHVNAWC-LPYAATLVGAKQV 248 (541)
T ss_dssp CCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCT-TCEEEECSCTTSHHHHT-HHHHHHHHTCEEE
T ss_pred ccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCC-CCEEEEeccchhhhHHH-HHHHHHhcCceEE
Confidence 23467899999999999999999999999998776542 34566777 99999999999999864 4678899999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++.++++.+++.|+++++|+++++
T Consensus 249 ~~~~~~~~~~~~~~i~~~~~t~~~~~ 274 (541)
T 1v25_A 249 LPGPRLDPASLVELFDGEGVTFTAGV 274 (541)
T ss_dssp ECTTCCSHHHHHHHHHHTTCCEEEEC
T ss_pred eeCCCCCHHHHHHHHHhcCeeEEecc
Confidence 98556899999999999999999864
No 3
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=99.92 E-value=5.5e-25 Score=183.27 Aligned_cols=166 Identities=17% Similarity=0.137 Sum_probs=128.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
|++||.++.+++.++++++++++++++.+... ...++..+.++.... ...+.++........ .
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~ 175 (539)
T 1mdb_A 103 VFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGE-AEEFLPLEDLHTEPV------K 175 (539)
T ss_dssp EECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESC-CTTSEEGGGCCCCCC------C
T ss_pred ecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCC-ccchhhhhhcccccc------c
Confidence 45599999999999999999999999875211 112345555544311 112222222111110 1
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEEE
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTTV 163 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~vv 163 (190)
.....++|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+++.. .++.++..|++++
T Consensus 176 ~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 254 (539)
T 1mdb_A 176 LPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDH-STVYLAALPMAHNYPLSSPGVLGVLYAGGRVV 254 (539)
T ss_dssp CCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCT-TCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred cCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCC-CCEEEEeecccccchhhHHHHHHHHHhCCEEE
Confidence 13457899999999999999999999999999998887777788887 999999999999999764 6889999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+. +.++++.+++.|+++++|++.++
T Consensus 255 ~~-~~~~~~~~~~~i~~~~~t~~~~~ 279 (539)
T 1mdb_A 255 LS-PSPSPDDAFPLIEREKVTITALV 279 (539)
T ss_dssp EC-SSSSHHHHHHHHHHHTCSEEEEC
T ss_pred EC-CCCCHHHHHHHHHHcCCeEEEcc
Confidence 98 67999999999999999998764
No 4
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=99.92 E-value=1.6e-24 Score=180.68 Aligned_cols=167 Identities=17% Similarity=0.167 Sum_probs=128.8
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEeec--CcccHHHHHhcCCCcchhhhhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLALRM--GTFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~~~--~~~~~~~l~~~~~~~~~~~~~~ 83 (190)
++||.++.+++.+++++++|++++++..... ....+....++.... ....+.++.........
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 183 (544)
T 3o83_A 109 NALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGLLDWIETPAETFV----- 183 (544)
T ss_dssp ECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTTSEEHHHHHHSCCSSCC-----
T ss_pred cCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCccccchhhhhhccccccc-----
Confidence 3599999999999999999999999876321 112233444444311 22344555443322111
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTT 162 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~v 162 (190)
......++++++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+++.. .++.++..|+++
T Consensus 184 ~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~ 262 (544)
T 3o83_A 184 DFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNS-NTRLLCALPAPHNFMLSSPGALGVLHAGGCV 262 (544)
T ss_dssp CCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCT-TCEEEECSCTTSHHHHHSSHHHHHHHTTCEE
T ss_pred ccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCC-CCeEEEecCcceEeecchHHHHHHHHcCCEE
Confidence 013457899999999999999999999999999999888888889988 999999999999998664 578899999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +++++..+++.|+++++|++.++
T Consensus 263 v~~-~~~~~~~~~~~i~~~~~t~~~~~ 288 (544)
T 3o83_A 263 VMA-PNPEPLNCFSIIQRHQVNMASLV 288 (544)
T ss_dssp EEC-SSCCHHHHHHHHHHHTCCEEEEC
T ss_pred EEC-CCCCHHHHHHHHHHHCCCEEEec
Confidence 999 68999999999999999998864
No 5
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=99.92 E-value=5e-25 Score=183.85 Aligned_cols=166 Identities=20% Similarity=0.206 Sum_probs=131.9
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC----CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK----ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNC 90 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 90 (190)
|++||.++.+++.++++++++++++++..... .........++........+.+++........ .....+
T Consensus 105 vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 178 (549)
T 3g7s_A 105 VPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVNSLSEVMDSGSEDFE------NVKVNP 178 (549)
T ss_dssp EECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETCSSSCHHHHHHHSCSCCC------CCCCCT
T ss_pred EccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCCCCcCHHHHHhcCccccc------cccCCC
Confidence 34599999999999999999999999876322 01112244455544455667777665433211 122334
Q ss_pred -CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCC
Q psy13808 91 -RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSF 169 (190)
Q Consensus 91 -~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~ 169 (190)
+|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+++.. ++.++..|+++++. +.+
T Consensus 179 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~~-~~~ 255 (549)
T 3g7s_A 179 EEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSH-MDTIVGCMPMFHSAEFGL-VNLMVTVGNEYVVM-GMF 255 (549)
T ss_dssp TTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCT-TCEEECCSCTTSHHHHHH-HTTHHHHCCEEEEE-SSC
T ss_pred CCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCC-CCEEEEeCcHHHHHHHHH-HHHHHhcCceEEEc-CCC
Confidence 89999999999999999999999999999888888888887 999999999999999766 78899999999999 689
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.+++.|+++++|+++++
T Consensus 256 ~~~~~~~~i~~~~~t~~~~~ 275 (549)
T 3g7s_A 256 NQEMLAENIEKYKGTFSWAV 275 (549)
T ss_dssp CHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHhCCeEEEeC
Confidence 99999999999999998764
No 6
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=99.92 E-value=1e-24 Score=182.05 Aligned_cols=172 Identities=19% Similarity=0.143 Sum_probs=124.2
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEee-----cCcccHHHHHhcCCCcchhhhh-h
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALR-----MGTFRLSDIMQGAGPEYHRRRE-Q 83 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~-----~~~~~~~~l~~~~~~~~~~~~~-~ 83 (190)
|++||.++.+++.++++++++++++++.+... ....+....++.+. .+..++.+++............ .
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 3rix_A 103 APANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFV 182 (550)
T ss_dssp EECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBCBHHHHHHHHCCTTCCTTTCC
T ss_pred eecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCcccHHHHhhccccccccccccC
Confidence 34599999999999999999999999987332 12345566666541 2344566665443221110000 0
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
+.....++++++|+|||||||.||||+++|+++.......... .++.+ ++++++.+|++|.+|+. .++.++..|+
T Consensus 183 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~g~~-~~~~~l~~G~ 260 (550)
T 3rix_A 183 PESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIP-DTAILSVVPFHHGFGMF-TTLGYLICGF 260 (550)
T ss_dssp CCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCT-TCEEEECSCTTSHHHHH-HHHHHHHHTC
T ss_pred CCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCC-CcEEEEechHHHHHHHH-HHHHHHHcCC
Confidence 1122345789999999999999999999999999877665544 45666 99999999999999964 5788999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. ++++++.+++.|+++++|+++++
T Consensus 261 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 288 (550)
T 3rix_A 261 RVVLM-YRFEEELFLRSLQDYKIQSALLV 288 (550)
T ss_dssp EEEEC-SSCCHHHHHHHHHHTTCSEEEEC
T ss_pred EEEEe-CCCCHHHHHHHHHHcCCeEEEeC
Confidence 99999 78999999999999999998764
No 7
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=99.92 E-value=1.7e-24 Score=180.72 Aligned_cols=167 Identities=20% Similarity=0.219 Sum_probs=126.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-----CCCCCCcEEEEeecC-----cccHHHHHhcCCCcchhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-----DALPTKLTRLALRMG-----TFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~i~~~~~-----~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
|++||.++.+++.+++++++++++|++...... ...+....++.+... ...+++++.........
T Consensus 105 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 179 (548)
T 2d1s_A 105 APTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTFIKRNTPPGFQ----- 179 (548)
T ss_dssp EEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTTBCBHHHHHHHTSCTTCC-----
T ss_pred eccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCcccccccccHHHHHhcCccccCC-----
Confidence 344999999999999999999999999873221 122334444444211 23466666543211000
Q ss_pred hccCC-----C-CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHH
Q psy13808 85 SKSLN-----C-RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNA 155 (190)
Q Consensus 85 ~~~~~-----~-~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 155 (190)
..... + +++++|+|||||||.||||+++|+++.+........ +++.+ +|++++.+|++|.+|+...++.+
T Consensus 180 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~ 258 (548)
T 2d1s_A 180 ASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSP-GTAVLTVVPFHHGFGMFTTLGYL 258 (548)
T ss_dssp GGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCT-TCEEEECSCTTSHHHHHHHHHHH
T ss_pred cccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCc-cceEEEeccHHHHHHHHHHHHHH
Confidence 11122 4 899999999999999999999999999887766655 57776 99999999999999976656777
Q ss_pred HHhCCEEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 156 MNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 156 l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+ .|+++++. ++++++.+++.|+++++|+++++
T Consensus 259 l-~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~ 290 (548)
T 2d1s_A 259 I-CGFRVVML-TKFDEETFLKTLQDYKCTSVILV 290 (548)
T ss_dssp H-TTCEEEEC-CCCCHHHHHHHHHHTTEEEEEEC
T ss_pred h-cCcEEEEc-CCCCHHHHHHHHHHcCCcEEEec
Confidence 7 99999999 68999999999999999999864
No 8
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=99.92 E-value=1.2e-24 Score=185.02 Aligned_cols=167 Identities=16% Similarity=0.148 Sum_probs=128.0
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCC--------------CCC--CCCcEEEEeec----------CcccHHHH
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKA--------------DAL--PTKLTRLALRM----------GTFRLSDI 69 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~--------------~~~--~~~~~~i~~~~----------~~~~~~~l 69 (190)
+++|.++++++.+++++++|+++|++...... ... +....++++.. ....|+++
T Consensus 161 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 240 (652)
T 1pg4_A 161 VIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDL 240 (652)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHHHH
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCCCceeHHHH
Confidence 44999999999999999999999998763210 111 23455555421 12346666
Q ss_pred HhcCCCcchhhhhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHH-HhhhhcCCcCCCcEEEEeCCchhHHHH
Q psy13808 70 MQGAGPEYHRRREQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSN-FIGKRLEFDKTDHKILLQVPMFHTFGT 148 (190)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~-~~~~~~~~~~~~~~~l~~~pl~h~~g~ 148 (190)
+....... ......++|+++|+|||||||+||||+++|++++.... .....+++.+ +|++++..|++|..|.
T Consensus 241 ~~~~~~~~------~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~g~ 313 (652)
T 1pg4_A 241 IEKASPEH------QPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHP-GDIYWCTADVGWVTGH 313 (652)
T ss_dssp HTTSCSCC------CCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCT-TCEEEECSCTTSHHHH
T ss_pred HhhcCCCC------CccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCC-CCEEEEccCCeeeech
Confidence 65432211 12335689999999999999999999999999887653 4455678887 9999999999999997
Q ss_pred HHHHHHHHHhCCEEEEcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 149 AMGILNAMNHGSTTVVPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 149 ~~~~~~~l~~G~~vv~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.++.+|..|+++++.++ .+++..+++.|+++++|+++++
T Consensus 314 ~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~ 357 (652)
T 1pg4_A 314 SYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTA 357 (652)
T ss_dssp HHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeC
Confidence 6778999999999999853 2699999999999999999864
No 9
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.92 E-value=2.6e-24 Score=177.56 Aligned_cols=173 Identities=20% Similarity=0.160 Sum_probs=123.9
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC----CCCCCcEEEEe--ecC------cccHHHHHhcCCCcchhh
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD----ALPTKLTRLAL--RMG------TFRLSDIMQGAGPEYHRR 80 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~i~~--~~~------~~~~~~l~~~~~~~~~~~ 80 (190)
..|++||.++++++.++++++++++++++.+..... ........... ... ...+.......... ...
T Consensus 74 v~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 152 (501)
T 3ipl_A 74 EIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPK-ESP 152 (501)
T ss_dssp EEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC---------------------------------CCH
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccccchhhcccc-CCc
Confidence 346679999999999999999999999987733211 01111111110 000 00000000000000 001
Q ss_pred hhhhhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 81 REQISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
........+++|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+|+.. ++.++..|+
T Consensus 153 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~-~~~~l~~G~ 230 (501)
T 3ipl_A 153 SNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDR-DTNWLSVLPIYHISGLSV-LLRAVIEGF 230 (501)
T ss_dssp HHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCT-TCEEEECSCTTSHHHHHH-HHHHHHHTC
T ss_pred ccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCc-cCEEEEeCcHHHHHHHHH-HHHHHHcCc
Confidence 111223467899999999999999999999999999999888888888887 999999999999999655 788999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. ++++++.+++.|+++++|+++++
T Consensus 231 ~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 258 (501)
T 3ipl_A 231 TVRIV-DKFNAEQILTMIKNERITHISLV 258 (501)
T ss_dssp EEEEC-SSCCHHHHHHHHHHSCCCEEEEC
T ss_pred eEEeC-CCCCHHHHHHHHHHcCCcEEEch
Confidence 99999 68999999999999999999864
No 10
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.91 E-value=1.1e-24 Score=180.10 Aligned_cols=167 Identities=16% Similarity=0.183 Sum_probs=124.6
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
|++||.++.+++.++++++++++++++.+... ...++....++.+..+...+.++........ .......
T Consensus 84 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 158 (509)
T 3ivr_A 84 LPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSGPFAPFKDLASDTP-----FSAPEFG 158 (509)
T ss_dssp EECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCCSSCEEGGGTCCCSC-----CCCCCCC
T ss_pred EecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCCcChhhHhhccCCCC-----CCcCCCC
Confidence 44599999999999999999999999987322 1334455555554333233333333111111 1124567
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSF 169 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~ 169 (190)
++|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+|+.. .+.++..|++.++. ..+
T Consensus 159 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~-~~~~~~~~g~~~~~-~~~ 235 (509)
T 3ivr_A 159 AADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTE-ADVNLGMLPLFHVTGLGL-MLTLQQAGGASVIA-AKF 235 (509)
T ss_dssp TTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCT-TCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEC-SSC
T ss_pred ccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCC-CcEEEEeCCCcchhHHHH-HHHHHHhCCcEEEe-ccc
Confidence 899999999999999999999999999999888888889988 999999999999999665 45555556666666 489
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.+++.|+++++|++.++
T Consensus 236 ~~~~~~~~i~~~~~t~~~~~ 255 (509)
T 3ivr_A 236 DPAQAARDIEAHKVTVMAEF 255 (509)
T ss_dssp CHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHCCcEEEec
Confidence 99999999999999998753
No 11
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=99.91 E-value=2.3e-24 Score=178.67 Aligned_cols=165 Identities=19% Similarity=0.207 Sum_probs=121.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLN 89 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 89 (190)
|++||.++.+++.++++++++++++++..... ....+....++.. .....+.+.+....... ......
T Consensus 96 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~ 168 (517)
T 3r44_A 96 VPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDW-IGADSLAERLRSAAADE------PAVECG 168 (517)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEE-EEHHHHHHHHHHCCCCC------CCCCCC
T ss_pred EecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEc-cCcccHHHHhhccCcCC------CCCCCC
Confidence 34599999999999999999999999876221 0111112211111 11123444443322211 123457
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSF 169 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~ 169 (190)
++|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|..++...++ +++.|+++++. +.+
T Consensus 169 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~~~~~~-~~~~G~~~v~~-~~~ 245 (517)
T 3r44_A 169 GDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRY-RDRLLLPLPMFHVAALTTVIF-SAMRGVTLISM-PQF 245 (517)
T ss_dssp TTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCT-TCEEEECSCTTSHHHHHHHHH-HHHHTCEEEEC-SSC
T ss_pred CCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCC-CCEEEEeCchHHHHHHHHHHH-HHhcCeEEEEe-CCC
Confidence 899999999999999999999999999999888888888888 999999999999999765444 45599999998 789
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
++..+++.++++++|++.++
T Consensus 246 ~~~~~~~~i~~~~~t~~~~~ 265 (517)
T 3r44_A 246 DATKVWSLIVEERVCIGGAV 265 (517)
T ss_dssp CHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHhCCeEEEeH
Confidence 99999999999999998764
No 12
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=99.91 E-value=2.5e-24 Score=178.05 Aligned_cols=158 Identities=18% Similarity=0.234 Sum_probs=126.3
Q ss_pred cccccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 12 EDRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 12 ~~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
+..|++||.++.+++.++++++++++++++.+............+.. ... ..... .....+++
T Consensus 93 a~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~-------~~~~~~~~ 155 (505)
T 3nyq_A 93 VAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELPPALGALERVDV-DVR---------ARGAV-------PEDGADDG 155 (505)
T ss_dssp CCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCCGGGTTSEEEEC-CTT---------CCCCC-------CCCCCCTT
T ss_pred CEEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccchhhcccccccc-ccc---------cccCC-------CCCCCCCC
Confidence 44678899999999999999999999999876322222222222211 100 00000 12345789
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCCh
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKP 171 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~ 171 (190)
|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|..|+.+.++.++..|+++++. +++++
T Consensus 156 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~ 233 (505)
T 3nyq_A 156 DPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTG-EDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHL-GRFST 233 (505)
T ss_dssp SEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCT-TCEEEECCCTTSHHHHTTTTHHHHHHTCEEEEC-SSCCH
T ss_pred CeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCC-CcEEEEeccHHHHHHHHHHHHHHHhcCCEEEEC-CCCCh
Confidence 9999999999999999999999999999888888888887 999999999999999877789999999999999 78999
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
+.+++.+ ++++|+++++
T Consensus 234 ~~~~~~i-~~~~t~~~~~ 250 (505)
T 3nyq_A 234 EGAAREL-NDGATMLFGV 250 (505)
T ss_dssp HHHHHHH-TTTCCEEEEC
T ss_pred HHHHHHH-hhCCeEEEeh
Confidence 9999999 8999998764
No 13
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=99.91 E-value=9.2e-24 Score=177.07 Aligned_cols=167 Identities=13% Similarity=0.135 Sum_probs=127.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeec----CcccHHHHHhcCCCcchhhhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRM----GTFRLSDIMQGAGPEYHRRREQIS 85 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~----~~~~~~~l~~~~~~~~~~~~~~~~ 85 (190)
|++||.++.+++.+++++++++++|++.+... ....+.++.++.+.. +...+.+++....... ..
T Consensus 127 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 200 (570)
T 3c5e_A 127 MPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEASTTH------HC 200 (570)
T ss_dssp EECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEHHHHHHHSCSCC------CC
T ss_pred EecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccHHHHhhcccccc------cc
Confidence 34499999999999999999999999876322 123455555555422 3345666665432211 01
Q ss_pred ccCCCCCeEEEEecCCCCCCCceeEechHHHHH-HHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 86 KSLNCRDGINIQFTSGTTGHPKAAFLTHYNLIN-NSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 86 ~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~-~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
....++|+++|+|||||||.||||+++|+.+.. ..... ..+++.+ +|++++..|++|..++...++.++..|+++++
T Consensus 201 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~-~~~~~~~-~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 278 (570)
T 3c5e_A 201 VETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDA-GWTGLQA-SDIMWTISDTGWILNILCSLMEPWALGACTFV 278 (570)
T ss_dssp CCCBTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHT-TTTSCCT-TCEEEECCCTTSHHHHHHTTHHHHHHTCEEEE
T ss_pred cCCCCCCcEEEEECCCCCCCCCEEEechHHHHhhhhhhh-hhcCCCC-CceEEEcCchHHHHHHHHHHHHHHHhCceEEE
Confidence 335689999999999999999999999994332 33333 6677877 99999999999999977678899999999999
Q ss_pred cCC-CCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAP-SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~-~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+. .+++..+++.|+++++|+++++
T Consensus 279 ~~~~~~~~~~~~~~i~~~~~t~~~~~ 304 (570)
T 3c5e_A 279 HLLPKFDPLVILKTLSSYPIKSMMGA 304 (570)
T ss_dssp ECCSSCCHHHHHHHHHHSCCCEEEEC
T ss_pred ecCCCCCHHHHHHHHHHhCCeEEecc
Confidence 843 7899999999999999999864
No 14
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=99.91 E-value=1.7e-24 Score=178.99 Aligned_cols=162 Identities=19% Similarity=0.234 Sum_probs=118.1
Q ss_pred cCCCCCCccchhhhhhccCCCCCCC--CCCCCCC--CCCCCCcEEEEeecCcccHHHHHhcCCCcc-hhhhhhhhccCCC
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNP--RPSAYKA--DALPTKLTRLALRMGTFRLSDIMQGAGPEY-HRRREQISKSLNC 90 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~--~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~ 90 (190)
++||.++.+++.+++++++++++++ +.+.... ...+..+ ++ .+++++....... ... .......+
T Consensus 83 pl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~ 152 (504)
T 1t5h_X 83 LLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGSGAR-II-------FLGDLVRDGEPYSYGPP--IEDPQREP 152 (504)
T ss_dssp EECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCCCCE-EE-------EGGGTEETTEECCCSCC--CCCCCCCT
T ss_pred ecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccccce-eE-------EecchhhcCcccccCCc--cCCCCCCC
Confidence 3499999999999999999999999 5442110 1112222 22 2333332210000 000 00134578
Q ss_pred CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCC--cCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEF--DKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 91 ~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~--~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
+++++|+|||||||.||||+++|+++.+........+++ .+ ++++++.+|++|.+|+...++.++..|+++++. +.
T Consensus 153 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~ 230 (504)
T 1t5h_X 153 AQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGR-HNVVLGLMPLYHVVGFFAVLVAALALDGTYVVV-EE 230 (504)
T ss_dssp TSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSST-TCEEEECSCTTSHHHHTTTHHHHHHTTCEEEEC-SS
T ss_pred CCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCC-CceEEeecchhhcchHHHHHHHHHHcCceEEeC-CC
Confidence 999999999999999999999999999888777777777 65 899999999999999766688999999999999 67
Q ss_pred CChHHHHHHHHHCCceEEecc
Q psy13808 169 FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++..+++.|+++++|+++++
T Consensus 231 ~~~~~~~~~i~~~~~t~~~~~ 251 (504)
T 1t5h_X 231 FRPVDALQLVQQEQVTSLFAT 251 (504)
T ss_dssp CCHHHHHHHHHHHTCCEEECC
T ss_pred CCHHHHHHHHHHhCCeEEEeC
Confidence 999999999999999999864
No 15
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=99.91 E-value=7.6e-25 Score=182.31 Aligned_cols=166 Identities=22% Similarity=0.268 Sum_probs=126.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCC----CCCCCcEEEEe---ecCcccHHHHHhcCCCcchhhhhhhhcc
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKAD----ALPTKLTRLAL---RMGTFRLSDIMQGAGPEYHRRREQISKS 87 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~i~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 87 (190)
|++||.++.+++.++++++++++++++....... ..... .++.+ ..+...+.++........ ....
T Consensus 102 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 174 (536)
T 3ni2_A 102 TAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDV-KVMCVDSAPDGCLHFSELTQADENEA------PQVD 174 (536)
T ss_dssp EECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTC-EEEESSCCCTTCEETHHHHTSCGGGC------CCCC
T ss_pred eccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCc-eEEEecCCCCCccCHHHHhhcccccc------ccCC
Confidence 3449999999999999999999999987633210 00112 23332 223345565554332111 1234
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..++|+++|+|||||||.||||+++|+++.+....... .+++.+ +|++++.+|++|.+++...++.++..|++++
T Consensus 175 ~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v 253 (536)
T 3ni2_A 175 ISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHS-EDVILCVLPMFHIYALNSIMLCGLRVGAPIL 253 (536)
T ss_dssp CCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCT-TCCEEECSCTTSHHHHHHTHHHHHHHTCCEE
T ss_pred CCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCC-CCEEEEecChHHHHHHHHHHHHHHhcCCEEE
Confidence 67899999999999999999999999999887665433 345666 9999999999999998777889999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+. +++++..+++.++++++|++.++
T Consensus 254 ~~-~~~~~~~~~~~i~~~~~t~~~~~ 278 (536)
T 3ni2_A 254 IM-PKFEIGSLLGLIEKYKVSIAPVV 278 (536)
T ss_dssp EC-SSCCHHHHHHHHHHHTCCEEEEC
T ss_pred Ec-CCCCHHHHHHHHHHhCCeEEEcc
Confidence 99 78999999999999999998764
No 16
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=99.91 E-value=1.4e-23 Score=173.63 Aligned_cols=160 Identities=14% Similarity=0.185 Sum_probs=125.1
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
|++||.++.+++.++++++++++++++........ ..... ...+.++......... ......+++++
T Consensus 80 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~a 146 (511)
T 3e7w_A 80 IPVDLSIPSERIAKIIESSGAELLIHAAGLSIDAV-GQQIQ-------TVSAEELLENEGGSVS-----QDQWVKEHETF 146 (511)
T ss_dssp EEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTCC-CCSSC-------EEEHHHHHTSCSCCCC-----GGGSCCTTSEE
T ss_pred EecCCCChHHHHHHHHHhCCCCEEEecccccchhc-ccccc-------eecHhhhhccccCCcc-----ccccCCCCCeE
Confidence 34489999999999999999999999765322111 11111 1234555543322211 12346789999
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CChH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FKPM 172 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~~~ 172 (190)
+|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|..++ +.++.++..|+++++.+.. +++.
T Consensus 147 ~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~ 224 (511)
T 3e7w_A 147 YIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSG-GKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCVTKDAVNKPK 224 (511)
T ss_dssp EEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTT-TCEEEECSCTTSTHHH-HHHHHHHHTTCEEEECCHHHHHSHH
T ss_pred EEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCc-cceEEEeCCccHHHHH-HHHHHHHhcCCEEEEcChhhhcCHH
Confidence 9999999999999999999999999888888888887 9999999999999985 5589999999999998422 6999
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.+++.++++++|++.++
T Consensus 225 ~~~~~i~~~~~t~~~~~ 241 (511)
T 3e7w_A 225 VLFEELKKSGLNVWTST 241 (511)
T ss_dssp HHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHcCCcEEEec
Confidence 99999999999998764
No 17
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=99.91 E-value=5.9e-24 Score=176.58 Aligned_cols=168 Identities=13% Similarity=0.187 Sum_probs=121.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCC-cEEEEeecC------cccHHHHHhcCCCcchhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTK-LTRLALRMG------TFRLSDIMQGAGPEYHRRRE 82 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~-~~~i~~~~~------~~~~~~l~~~~~~~~~~~~~ 82 (190)
|++||.++.+++.++++++++++++++..... ....+.. ..+++.... ...+++++.......
T Consensus 101 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 175 (529)
T 2v7b_A 101 VVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLFEELIDAAAPAA----- 175 (529)
T ss_dssp EECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBHHHHHHTSCCCS-----
T ss_pred EecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccchhhhhccCCCcc-----
Confidence 34499999999999999999999999876321 0112233 334433111 124566554322111
Q ss_pred hhhccCCCCCeEEEEecCCCCCCCceeEechHHH-HHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 83 QISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNL-INNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 83 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~-~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
......++|+++|+|||||||.||||+++|+++ ..........+++.+ +|++++.+|++|.+++...++.++..|++
T Consensus 176 -~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g~~~~~~~~l~~G~~ 253 (529)
T 2v7b_A 176 -KAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAE-NDVVFSAAKLFFAYGLGNGLTFPLSVGAT 253 (529)
T ss_dssp -SCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCT-TCEEEESSCTTSHHHHHHHTHHHHHHTCE
T ss_pred -cccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCC-CcEEEEeecHHHHHHHHHHHHHHHhcCcE
Confidence 123457899999999999999999999999999 566555555677777 99999999999999977667889999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+++.++.++++.+++.++++++|+++++
T Consensus 254 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~ 281 (529)
T 2v7b_A 254 AILMAERPTADAIFARLVEHRPTVFYGV 281 (529)
T ss_dssp EECCCSCCCHHHHHHHHHHSCCSEEEEC
T ss_pred EEEecCCCCHHHHHHHHHHhCCEEEEec
Confidence 9988667899999999999999999864
No 18
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.90 E-value=1.9e-23 Score=176.62 Aligned_cols=167 Identities=15% Similarity=0.129 Sum_probs=130.8
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC----------CCCCCCCcEEEEe-ecCcccHHHHHhcCCCcchhhhhh
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK----------ADALPTKLTRLAL-RMGTFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~----------~~~~~~~~~~i~~-~~~~~~~~~l~~~~~~~~~~~~~~ 83 (190)
|+++|.++.+++.++++++++++++++..... ....+....+... ......+.+.........
T Consensus 103 vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 176 (617)
T 3rg2_A 103 VLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDF------ 176 (617)
T ss_dssp EEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCSTTBHHHHHHSCCSSC------
T ss_pred ccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccccchhhhhccccccc------
Confidence 44599999999999999999999999877331 0122344444443 222334555444332221
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHH-HHHHHHHhCCEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAM-GILNAMNHGSTT 162 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~l~~G~~v 162 (190)
......++++++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+++.. .++.++..|+++
T Consensus 177 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~-~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~ 255 (617)
T 3rg2_A 177 TATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQ-QTRYLCAIPAAHNYAMSSPGSLGVFLAGGTV 255 (617)
T ss_dssp CCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCT-TCEEEECSCTTSHHHHHSSHHHHHHHHTCEE
T ss_pred CCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCC-cceEEEeccchhhhhhhHHHHHHHHHcCCEE
Confidence 123456899999999999999999999999999999888888888887 999999999999998654 688999999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.+++..+++.++++++|++.++
T Consensus 256 v~~-~~~~~~~~~~~i~~~~~t~~~~~ 281 (617)
T 3rg2_A 256 VLA-ADPSATLCFPLIEKHQVNVTALV 281 (617)
T ss_dssp EEC-SSCCHHHHHHHHHHTTCCEEEEC
T ss_pred EEe-CCCCHHHHHHHHHHhCCcEEEcc
Confidence 998 67899999999999999998764
No 19
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=99.90 E-value=1.7e-23 Score=173.19 Aligned_cols=163 Identities=15% Similarity=0.181 Sum_probs=120.7
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.|++||.++.+++.++++++++++++++...... .....+.. ...+.++........ ........++++
T Consensus 78 ~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~d~ 146 (512)
T 3fce_A 78 YIPVDLSIPADRVQRIAENSGAKLLLSATAVTVT----DLPVRIVS---EDNLKDIFFTHKGNT----PNPEHAVKGDEN 146 (512)
T ss_dssp EEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSS----CCSSEEEE---THHHHHHHHHTTTCC----CCGGGSCCTTSE
T ss_pred EEeeCCCCcHHHHHHHHHhcCCCEEEecCccccc----ccccceec---hhhhhhhcccccccC----CCccccCCCCCe
Confidence 3455899999999999999999999998653221 11111221 112333322211111 011345678999
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CCh
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FKP 171 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~~ 171 (190)
++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|..++ +.++.++..|+++++.++. +++
T Consensus 147 a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~ 224 (512)
T 3fce_A 147 FYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQT-GQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWAIDKDMIARP 224 (512)
T ss_dssp EEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCS-SCEEEECSCTTSGGGH-HHHHHHHHTTCEEEECCHHHHHSH
T ss_pred EEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCC-CCEEEEeCCccHhHHH-HHHHHHHhCCCEEEECCHHHhhCH
Confidence 99999999999999999999999999888888889988 9999999999999985 5589999999999998422 799
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
..+++.++++++|++.++
T Consensus 225 ~~~~~~i~~~~~t~~~~~ 242 (512)
T 3fce_A 225 KDLFASLEQSDIQVWTST 242 (512)
T ss_dssp HHHHHHHHHHCCCEEEEC
T ss_pred HHHHHHHHHcCCcEEEec
Confidence 999999999999998764
No 20
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=99.89 E-value=9.2e-24 Score=174.59 Aligned_cols=165 Identities=23% Similarity=0.265 Sum_probs=121.4
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCC-C-CC-CcEEEEee-cCcccHHHHHhcCCCcchhhhhhhhccCCC
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADA-L-PT-KLTRLALR-MGTFRLSDIMQGAGPEYHRRREQISKSLNC 90 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-~-~~-~~~~i~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 90 (190)
|++||.++.+++.++++++++++++++........ . .. ...+..+. .....+.+......... ......+
T Consensus 81 vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 154 (503)
T 4fuq_A 81 LPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRGSLTDAAAGASEAF------ATIDRGA 154 (503)
T ss_dssp EECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTTSCSHHHHHHHTSCSCC------CCCCCCT
T ss_pred EecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCCcccccchhhhcCCCCc------CcCCCCC
Confidence 34599999999999999999999999976332110 0 00 01222221 11122222222211111 1234578
Q ss_pred CCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC
Q psy13808 91 RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK 170 (190)
Q Consensus 91 ~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~ 170 (190)
+|+++|+|||||||.||||+++|+++.+........+++.+ +|++++.+|++|.+|+...++.++..|+++++. ++++
T Consensus 155 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~-~~~~ 232 (503)
T 4fuq_A 155 DDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTP-DDVLIHALPIYHTHGLFVASNVTLFARGSMIFL-PKFD 232 (503)
T ss_dssp TSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCT-TCEEEECSCSSSHCCCCCCHHHHHHTTCEEEEC-SSCC
T ss_pred CCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCC-CCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEc-CCCC
Confidence 99999999999999999999999999999888888889988 999999999999999766577889999999998 6899
Q ss_pred hHHHHHHHHHCCceEEecc
Q psy13808 171 PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~t 189 (190)
++.+++.++ ++|+++++
T Consensus 233 ~~~~~~~i~--~~t~~~~~ 249 (503)
T 4fuq_A 233 PDKILDLMA--RATVLMGV 249 (503)
T ss_dssp HHHHHHHHT--TCCEEEEC
T ss_pred HHHHHHHHh--hcCEEEEH
Confidence 999999998 78887753
No 21
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=99.89 E-value=4.4e-23 Score=173.29 Aligned_cols=171 Identities=12% Similarity=0.029 Sum_probs=131.2
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCC--C-----CCCCCCC-cEEEEe----ecCcccHHHHHhcCCCcchhhhhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAY--K-----ADALPTK-LTRLAL----RMGTFRLSDIMQGAGPEYHRRREQ 83 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~--~-----~~~~~~~-~~~i~~----~~~~~~~~~l~~~~~~~~~~~~~~ 83 (190)
|+||.++++++.+++++++++++|++.+.. . ....+.. ..++.+ ..++.++.+.+......... +.
T Consensus 140 pl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 217 (580)
T 3etc_A 140 PATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFRKELEESSPIFER--PT 217 (580)
T ss_dssp ECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHHHHHHHSCSCCCC--CC
T ss_pred eCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHHHHHhhCCccccc--Cc
Confidence 459999999999999999999999987633 1 1122333 334443 23455677666544332110 01
Q ss_pred hhccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 84 ISKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 84 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
......++|+++|+|||||||.||||+++|.++...........++.+ ++++++..|++|..+....++.++..|++++
T Consensus 218 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 296 (580)
T 3etc_A 218 GEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVED-DGLHYTVADSGWGKCVWGKLYGQWIAGCAVF 296 (580)
T ss_dssp GGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCT-TCEEEECCCTTSTHHHHHTTHHHHHTTCEEE
T ss_pred cccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCC-CceEEEeCChHHHHHHHHHHHHHHhCCcEEE
Confidence 113467899999999999999999999999999887777666778887 9999999999999886666788999999999
Q ss_pred EcC-CCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPA-PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~-~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+ ++++++.+++.|+++++|+++++
T Consensus 297 ~~~~~~~~~~~~~~~i~~~~vt~~~~~ 323 (580)
T 3etc_A 297 VYDYDRFEAKNMLEKASKYGVTTFCAP 323 (580)
T ss_dssp EEECSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred EecCCCCCHHHHHHHHHHHCCeEEEcc
Confidence 874 57999999999999999999864
No 22
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=99.89 E-value=2.2e-23 Score=170.94 Aligned_cols=157 Identities=17% Similarity=0.164 Sum_probs=109.2
Q ss_pred CCC---CCCccchhhhhhccCCCCCCCCCCCCC-----CCCCCCC--cEEEEeecCcccHHHHHhcCCCcchhhhhhhhc
Q psy13808 17 ESQ---PFRERTLSHQDKIRPGRESNPRPSAYK-----ADALPTK--LTRLALRMGTFRLSDIMQGAGPEYHRRREQISK 86 (190)
Q Consensus 17 i~p---~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~--~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 86 (190)
+|+ .++.+++.+++++++++++|++..... ....+.. ..++.. +.+..... . .....
T Consensus 112 l~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~-----~~~~~ 178 (480)
T 3t5a_A 112 LSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEV-------DLLDLDAP-N-----GYTFK 178 (480)
T ss_dssp ECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEG-------GGSCTTCC---------CCC
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEe-------cccccccc-c-----CCCCC
Confidence 377 788999999999999999999987322 1111111 122221 11101000 0 01123
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcC-----CCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDK-----TDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~-----~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
...++++++|+|||||||.||||+++|+++.+++......+++.. ++|++++.+|++|.+|+.+.++.++..|++
T Consensus 179 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 258 (480)
T 3t5a_A 179 EDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMGLVIGICAPILGGYP 258 (480)
T ss_dssp CSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTSTTHHHHHTHHHHHHTCC
T ss_pred CCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCccHHHHHHHHHHHcCCc
Confidence 457899999999999999999999999999988877766665543 279999999999999988788999999999
Q ss_pred EEEcCCC---CChHHHHHHHHHCCceEE
Q psy13808 162 TVVPAPS---FKPMDSLRAIAKEKCMEY 186 (190)
Q Consensus 162 vv~~~~~---~~~~~~~~~i~~~~iT~l 186 (190)
+++.++. ++++.+++.++++++|+.
T Consensus 259 ~v~~~~~~~~~~~~~~~~~i~~~~~t~~ 286 (480)
T 3t5a_A 259 AVLTSPVSFLQRPARWMHLMASDFHAFS 286 (480)
T ss_dssp EEECCHHHHHHCTHHHHHHTTSSSEEEE
T ss_pred eEEECHHHHHHCHHHHHHHHHhhceeEe
Confidence 9998432 499999999999999943
No 23
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.89 E-value=2.4e-23 Score=183.91 Aligned_cols=169 Identities=21% Similarity=0.273 Sum_probs=125.8
Q ss_pred cCCCCCCccchhhhhhccCCCCCCCCCCCCCCCC-C--CCCcEEEEee--------cCcccHHHHHhcCCCcchhhhhhh
Q psy13808 16 GESQPFRERTLSHQDKIRPGRESNPRPSAYKADA-L--PTKLTRLALR--------MGTFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 16 ~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-~--~~~~~~i~~~--------~~~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
++||.++++++.+++++++++++|++........ . .....++.++ .+...+.++........ ....
T Consensus 142 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 218 (979)
T 3tsy_A 142 AANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEAS---EVID 218 (979)
T ss_dssp EECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTSCCCTTEEEGGGTSSCCSGGG---GGSC
T ss_pred eeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCcccccCCcccccHHHHhhcccccc---ccCC
Confidence 3499999999999999999999999987433110 0 0111233321 12233444443322111 0112
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCC
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGS 160 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 160 (190)
.....++|+++|+|||||||.||||+++|+++.+....... .+++.+ +|++++.+|++|.+++...++.++..|+
T Consensus 219 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~~~~~~~~~~l~~G~ 297 (979)
T 3tsy_A 219 SVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHS-DDVILCVLPMFHIYALNSIMLCGLRVGA 297 (979)
T ss_dssp CSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCS-SCEEEECSCSSSHHHHHHTHHHHHHHTC
T ss_pred cCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCC-CCEEEEECchHHHHHHHHHHHHHHhcCc
Confidence 23467899999999999999999999999999987765433 345666 9999999999999998777889999999
Q ss_pred EEEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 161 TTVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 161 ~vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++++. ++++++.+++.|+++++|++.++
T Consensus 298 ~~v~~-~~~~~~~~~~~i~~~~~t~~~~~ 325 (979)
T 3tsy_A 298 AILIM-PKFEINLLLELIQRCKVTVAPMV 325 (979)
T ss_dssp EEEEC-SSCCHHHHHHHHHHHTCCEEEEC
T ss_pred EEEEe-CCCCHHHHHHHHHHhCCeEEEcH
Confidence 99999 78999999999999999998764
No 24
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=99.89 E-value=8e-23 Score=171.15 Aligned_cols=161 Identities=13% Similarity=0.104 Sum_probs=116.3
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCC-CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYK-ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
|++||.++.+++.++++++++++++++..... .........+....... + ....... ......++|+
T Consensus 117 vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~-------~~~~~~~~d~ 184 (563)
T 1amu_A 117 VPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEEDT--I---KIREGTN-------LHVPSKSTDL 184 (563)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECCCST--T---TTSCCSC-------CCCCCCTTSE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhccccCceeeecchh--h---ccccCcc-------CCCCCCCCCe
Confidence 44599999999999999999999999876221 11111122232221110 0 0000000 1123467899
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CCh
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FKP 171 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~~ 171 (190)
++|+|||||||.||||+++|+++.+........+++.+ +|++++..|++|..++ +.++.++..|+++++.+.. +++
T Consensus 185 a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~ 262 (563)
T 1amu_A 185 AYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTE-KDRIGQFASISFDASV-WEMFMALLTGASLYIILKDTINDF 262 (563)
T ss_dssp EEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCT-TCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCHHHHTCH
T ss_pred EEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCC-CCEEEEeCCccHHHHH-HHHHHHHHCCCEEEEcChHhhcCH
Confidence 99999999999999999999999988877777788887 9999999999999885 4578899999999998422 799
Q ss_pred HHHHHHHHHCCceEEecc
Q psy13808 172 MDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 172 ~~~~~~i~~~~iT~l~~t 189 (190)
..+++.++++++|++.++
T Consensus 263 ~~~~~~i~~~~~t~~~~~ 280 (563)
T 1amu_A 263 VKFEQYINQKEITVITLP 280 (563)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCcEEEeC
Confidence 999999999999998764
No 25
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=99.89 E-value=6.7e-23 Score=171.76 Aligned_cols=157 Identities=16% Similarity=0.113 Sum_probs=117.0
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
|++||.++.+++.++++++++++++++..... .++....++..... ....... .......++|++
T Consensus 153 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~~d~a 217 (570)
T 4gr5_A 153 TMLDPQFPVERLALSLEDTGAPLLVTSRPLSG--RLTGTTTLYVEDEA-------ASDAPAG------NLATGVGPEDVA 217 (570)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTT--SSCSSEEEECCC--------------CC------CCCCCCCTTSEE
T ss_pred EEcCCCChHHHHHHHHHhcCCCEEEecchhhh--cccCCcceeeeccc-------ccccccc------ccCCCCCCCCeE
Confidence 44599999999999999999999999976332 22333322221100 0000000 112346789999
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC-CCChHH
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP-SFKPMD 173 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~-~~~~~~ 173 (190)
+|+|||||||.||||+++|+++.+.... ...+++.+ +|++++.+|++|..+ .+.++.++..|+++++.+. .+++..
T Consensus 218 ~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~-~d~~l~~~p~~~~~~-~~~~~~~l~~G~~~v~~~~~~~~~~~ 294 (570)
T 4gr5_A 218 CVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGP-DEVFLQCSPVSWDAF-GLELFGALLFGARCVLQSGQNPDPLE 294 (570)
T ss_dssp EEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCST-TCEEEECSCTTSSTH-HHHHHHHHTTTCEEEECSSSSCCHHH
T ss_pred EEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCC-CCEEEEecCccHHHH-HHHHHHHHhcCCEEEEcCCccCCHHH
Confidence 9999999999999999999999776544 34556776 999999999998765 4568889999999999843 589999
Q ss_pred HHHHHHHCCceEEecc
Q psy13808 174 SLRAIAKEKCMEYLTK 189 (190)
Q Consensus 174 ~~~~i~~~~iT~l~~t 189 (190)
+++.|+++++|++.++
T Consensus 295 ~~~~i~~~~vt~~~~~ 310 (570)
T 4gr5_A 295 IGELVARHGVTMLQLS 310 (570)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHcCCcEEEec
Confidence 9999999999998764
No 26
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=99.89 E-value=8.8e-23 Score=172.65 Aligned_cols=156 Identities=15% Similarity=0.083 Sum_probs=117.4
Q ss_pred cccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCe
Q psy13808 14 RIGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDG 93 (190)
Q Consensus 14 ~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 93 (190)
.|++||.++.+++.++++++++++++++...... ...... +. +..... .... .......++|+
T Consensus 104 ~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~--~~~~~~-~~-------~~~~~~-~~~~------~~~~~~~~~d~ 166 (620)
T 4dg8_A 104 YLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTP--ANGLPC-VP-------VRHLPA-APAS------VARPCFAADQI 166 (620)
T ss_dssp EEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCC--CTTSCE-EE-------GGGCCC-CCCC------SSCCCCCTTSE
T ss_pred EEeeCccChHHHHHHHHHhCCCcEEEecCccccc--ccCCce-ee-------eccCCc-CCcc------ccCCCCCCCCe
Confidence 4556999999999999999999999966542221 111111 11 110000 0000 01234568999
Q ss_pred EEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC-CCCChH
Q psy13808 94 INIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA-PSFKPM 172 (190)
Q Consensus 94 ~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~-~~~~~~ 172 (190)
++|+|||||||.||||+++|+++.+.... ...+++.+ +|++++..|++|..+ .+.++.++..|+++++.+ ..++++
T Consensus 167 a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~-~d~~l~~~p~~~~~~-~~~~~~~l~~G~~~v~~~~~~~~~~ 243 (620)
T 4dg8_A 167 AYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAP-QMRFLVNSPLSFDAA-TLEIWGALLNGGCCVLNDLGPLDPG 243 (620)
T ss_dssp EEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCT-TCEEEECSCTTSTHH-HHHHHHHHTTTCEEEECCSSSCCHH
T ss_pred EEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCC-CCEEEEECccCHHHH-HHHHHHHHhcCCEEEeCccccCCHH
Confidence 99999999999999999999999876554 45567777 999999999999998 455899999999999973 368999
Q ss_pred HHHHHHHHCCceEEecc
Q psy13808 173 DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 173 ~~~~~i~~~~iT~l~~t 189 (190)
.+++.|+++++|+++++
T Consensus 244 ~~~~~i~~~~vt~~~~~ 260 (620)
T 4dg8_A 244 VLRQLIGERGADSAWLT 260 (620)
T ss_dssp HHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHhCCcEEEcc
Confidence 99999999999998764
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.88 E-value=8.5e-23 Score=171.45 Aligned_cols=161 Identities=23% Similarity=0.227 Sum_probs=119.2
Q ss_pred cCCCCC---CccchhhhhhccCCCCCCCCCCCCC---C---CCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhc
Q psy13808 16 GESQPF---RERTLSHQDKIRPGRESNPRPSAYK---A---DALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISK 86 (190)
Q Consensus 16 ~i~p~~---~~~~l~~~l~~~~~~~i~~~~~~~~---~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 86 (190)
++||.+ +.+++.++++.+++++++++.+... . ...+....+... ..+++..... ......
T Consensus 94 pl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~------~~~~~~ 162 (590)
T 3kxw_A 94 PIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAI-----ALESIELNRS------SSWQPT 162 (590)
T ss_dssp EECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEE-----EGGGCCGGGG------GGCCCC
T ss_pred EecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhccccccccee-----echhcccccc------ccCCCC
Confidence 347776 4578899999999999998876221 1 111211111111 1111100000 011123
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
...++|+++|+|||||||.||||+++|+++.+.+......+++.+ +|++++.+|++|.+|+...++.++..|+++++.
T Consensus 163 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~- 240 (590)
T 3kxw_A 163 SIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMND-ETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMM- 240 (590)
T ss_dssp CCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCT-TCEEEECSCTTSHHHHHTTTHHHHHHTCEEEEC-
T ss_pred CCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCC-cCeEEEecCCCcchhhHHHHHHHHhcCceEEEe-
Confidence 467899999999999999999999999999999988888889988 999999999999999766678899999999998
Q ss_pred CCC----ChHHHHHHHHHCCceEEecc
Q psy13808 167 PSF----KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 167 ~~~----~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+ ++..+++.|+++++|++.++
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~ 267 (590)
T 3kxw_A 241 SPFSFLQNPLSWLKHITKYKATISGSP 267 (590)
T ss_dssp CHHHHHHCTHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHCHHHHHHHHHHhCCeeecCC
Confidence 444 89999999999999998753
No 28
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.87 E-value=6.9e-22 Score=178.90 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=123.2
Q ss_pred ccccCCCCCCccchhhhhhccCCCCCCCCCCCCCC-CCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCC
Q psy13808 13 DRIGESQPFRERTLSHQDKIRPGRESNPRPSAYKA-DALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCR 91 (190)
Q Consensus 13 ~~v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
..||++|.++.+++.++++++++++++++...... ..++.....+.+... . .... .... ......++
T Consensus 540 ~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~-~~~~-------~~~~~~~~ 607 (1304)
T 2vsq_A 540 AYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQ-T---RFEE-QASD-------PATAIDPN 607 (1304)
T ss_dssp EEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCCCCSEEEESSCG-G---GGGS-CSSC-------CCCCCCTT
T ss_pred EEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccCCCCcEEEeccc-c---cccc-ccCC-------CCCCCCCC
Confidence 44567999999999999999999999999774332 223333333332111 1 1111 1100 12345789
Q ss_pred CeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC--CC
Q psy13808 92 DGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP--SF 169 (190)
Q Consensus 92 ~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~--~~ 169 (190)
++++|+|||||||+||||+++|+++.+. ......+++.+ +|+++...|++|..+ .+.++.++..|+++++.++ .+
T Consensus 608 ~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~-~d~~l~~~~~~fd~~-~~~~~~~l~~G~~l~~~~~~~~~ 684 (1304)
T 2vsq_A 608 DPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSD-QDTFLSVSNYAFDAF-TFDFYASMLNAARLIIADEHTLL 684 (1304)
T ss_dssp SEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCT-TCEEEECSCTTSTHH-HHHHHHHHTTTCEEEECCGGGTT
T ss_pred CeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCC-CCEEEEECCccHHHH-HHHHHHHHHcCCEEEECChhhcC
Confidence 9999999999999999999999999876 44555677777 999999999999877 5678999999999999853 37
Q ss_pred ChHHHHHHHHHCCceEEecc
Q psy13808 170 KPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 170 ~~~~~~~~i~~~~iT~l~~t 189 (190)
++..+++.|+++++|++.++
T Consensus 685 ~~~~l~~~i~~~~vt~~~~~ 704 (1304)
T 2vsq_A 685 DTERLTDLILQENVNVMFAT 704 (1304)
T ss_dssp CHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHcCCcEEEcc
Confidence 99999999999999999764
No 29
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=99.86 E-value=2.3e-21 Score=160.66 Aligned_cols=160 Identities=18% Similarity=0.146 Sum_probs=115.1
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
|++||.++++++.++++++++++++++.+.... +... .++.. ..+.+......... ......++|++
T Consensus 82 vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~--~~~~-~~~~~----~~~~~~~~~~~~~~------~~~~~~~~d~a 148 (521)
T 3l8c_A 82 IPVDVHSAPERILAIIEIAKPSLIIAIEEFPLT--IEGI-SLVSL----SEIESAKLAEMPYE------RTHSVKGDDNY 148 (521)
T ss_dssp EEEETTSCHHHHHHHHHHSCCSEEEESSCCCSC--CTTS-EEEEH----HHHHHHHHHTCCCC------CSSCCCTTSEE
T ss_pred EecCccccHHHHHHHHHhCCCCEEEecCccccc--cccC-cccch----hhhhhcccccCCcc------cCCCCCCCCcE
Confidence 345999999999999999999999998763221 1111 12211 01111111111110 12346789999
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhh--cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC--CC
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR--LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS--FK 170 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~--~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~--~~ 170 (190)
+|+|||||||.||||+++|+++.+........ +++.. ++++++..|++|..+. +.++.++..|+++++.+.. .+
T Consensus 149 ~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~ 226 (521)
T 3l8c_A 149 YIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPK-QPQMLAQPPYSFDLSV-MYWAPTLALGGTLFALPKELVAD 226 (521)
T ss_dssp EEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCS-SCEEECCSCTTSGGGH-HHHHHHHHTTCEEEECCGGGTTC
T ss_pred EEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCC-CCeEEecCCccHHHHH-HHHHHHHhcCCEEEEcCHHHhhC
Confidence 99999999999999999999999877665544 56666 8999999999999884 4578899999999998432 49
Q ss_pred hHHHHHHHHHCCceEEecc
Q psy13808 171 PMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 171 ~~~~~~~i~~~~iT~l~~t 189 (190)
+..+++.++++++|++.++
T Consensus 227 ~~~~~~~i~~~~~t~~~~~ 245 (521)
T 3l8c_A 227 FKQLFTTIAQLPVGIWTST 245 (521)
T ss_dssp HHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHHHHcCCcEEEeC
Confidence 9999999999999998764
No 30
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=99.86 E-value=1.2e-21 Score=163.84 Aligned_cols=165 Identities=15% Similarity=0.048 Sum_probs=117.5
Q ss_pred ccCCCCCCccchhhhhhccCCCCCCCCCCCCCCCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhhhccCCCCCeE
Q psy13808 15 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQISKSLNCRDGI 94 (190)
Q Consensus 15 v~i~p~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
|++||.++.+++.++++++++++++++.........+....++. .....+.+.+........ .....+++++
T Consensus 107 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~a 178 (562)
T 3ite_A 107 VPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVELPPETKVLD--TKNQSFIENLSTQDTSDI------LNNYPENLDA 178 (562)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCCCCTTCEEEE--TTCHHHHHHHHHSCCSCC------CCCCCTTSEE
T ss_pred EecCCcCHHHHHHHHHHhcCCCEEEEccccccccccCccceeec--ccchhhhhhccccccccc------ccCCCCCCcE
Confidence 44599999999999999999999999877554444444333332 222233333332221110 1334678899
Q ss_pred EEEecCCCCCCCceeEechHHHHHHHHHhhhh--------cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 95 NIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR--------LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 95 ~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~--------~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
+|+|||||||.||||+++|+++.+........ +.+.. .+++++..|++|..+ ...++.++..|+++++.+
T Consensus 179 ~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~ 256 (562)
T 3ite_A 179 YLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGG-VGKFLCLASRAFDVH-IGEMFLAWRFGLCAVTGE 256 (562)
T ss_dssp EEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTT-TCEEECCSCTTSTHH-HHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCc-CceEEEecCchhhhh-HHHHHHHHhcccEEEecc
Confidence 99999999999999999999998876554332 34555 899999999999887 455788999999999983
Q ss_pred CCCChHHHHHHHHHCCceEEecc
Q psy13808 167 PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 167 ~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
....++.+++.++++++|++.++
T Consensus 257 ~~~~~~~~~~~i~~~~~t~~~~~ 279 (562)
T 3ite_A 257 RLSMLDDLPRTFRELGVTHAGIV 279 (562)
T ss_dssp HHHHHHSHHHHHHHTTCCEEEEC
T ss_pred hhhCHHHHHHHHHHcCCCEEEcC
Confidence 32346789999999999998764
No 31
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.86 E-value=5.9e-22 Score=165.77 Aligned_cols=158 Identities=15% Similarity=0.165 Sum_probs=116.7
Q ss_pred CCCCCC-------ccchhhhhhccCCCCCCCCCCCCC-----CCCCCCCcEEEEeecCcccHHHHHhcCCCcchhhhhhh
Q psy13808 17 ESQPFR-------ERTLSHQDKIRPGRESNPRPSAYK-----ADALPTKLTRLALRMGTFRLSDIMQGAGPEYHRRREQI 84 (190)
Q Consensus 17 i~p~~~-------~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~ 84 (190)
+||.++ .+++.++++++++++++++.+... ....+... .+. .. .......... .
T Consensus 104 l~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~-------~~-~~~~~~~~~~-----~ 169 (576)
T 3gqw_A 104 LAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELH-VLS-------HA-WFKALPEADV-----A 169 (576)
T ss_dssp ECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCE-EEE-------HH-HHHTSCCCCC-----C
T ss_pred cCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcce-ecc-------hh-hhhccccccc-----c
Confidence 477777 789999999999999999876222 11112211 111 01 1111111100 1
Q ss_pred hccCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh-cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 85 SKSLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR-LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 85 ~~~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~-~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
.....++++++|+|||||||.||||+++|+++.++....... +++.+ +|++++.+|++|.+|+...++.++..|++++
T Consensus 170 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~ 248 (576)
T 3gqw_A 170 LQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRP-GDRCVSWLPFYHDMGLVGFLLTPVATQLSVD 248 (576)
T ss_dssp CCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCT-TCCEEECCCTTSHHHHHHHTHHHHHTTCCEE
T ss_pred cCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCC-cceEEEcCCccccccHHHHHHHHHhcCceEE
Confidence 233468999999999999999999999999999887766544 77887 9999999999999997766788899999999
Q ss_pred EcCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.+. .+++..+++.|+++++|+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 277 (576)
T 3gqw_A 249 YLRTQDFAMRPLQWLKLISKNRGTVSVAP 277 (576)
T ss_dssp ECCHHHHHHCTTHHHHHHHHTTCCEEEEC
T ss_pred EcchhHhhhCHHHHHHHHHHhCCeEEEcC
Confidence 8732 2689999999999999998764
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.83 E-value=8e-21 Score=150.88 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=84.8
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
..+++++|+|||||||.||||++||+++.+++......+++.+ +|++++.+|++|.+|+.. ++.++..|+++++.++.
T Consensus 35 ~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~-~d~~l~~~pl~h~~gl~~-~~~~l~~g~~~~~~~~~ 112 (358)
T 4gs5_A 35 LGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGP-GTRALVCLNVGYIAGLMM-LVRGMELDWELTVTEPT 112 (358)
T ss_dssp HHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCT-TCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEECCC
T ss_pred CCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCC-CCEEEEECChHHHHHHHH-HHHHHHhCcEEEecCcc
Confidence 3589999999999999999999999999999988888899988 999999999999999654 78889999999998555
Q ss_pred CChHHHHHHHHHCCceEEecc
Q psy13808 169 FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~t 189 (190)
++ .++.|+++++|++.++
T Consensus 113 ~~---~~~~i~~~~~t~~~~~ 130 (358)
T 4gs5_A 113 AN---PLAGLDHADFDFVAMV 130 (358)
T ss_dssp SC---TTTTCSSCCCSEEEEC
T ss_pred cc---HHHHHHHhCCeEEEcC
Confidence 54 4678999999998764
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.75 E-value=5.2e-18 Score=137.67 Aligned_cols=101 Identities=20% Similarity=0.146 Sum_probs=86.9
Q ss_pred cCCC-CCeEEEEecCCCCCCCceeEechHHHHHHHHHhh---hhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEE
Q psy13808 87 SLNC-RDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG---KRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 87 ~~~~-~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~v 162 (190)
...+ +++++|+|||||||.||||+++|+++.++..... ..+++.+ +|++++..|+.|..+....++.++..|+++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~ 159 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRK-TDVFQNSSGYGMFTGGLGFQYGAERLGCLT 159 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCT-TSEEEECSCCTTCHHHHHHHHHHHHHTCEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCC-CCEEEECcccccchhHHHHHHHHHHcCCEE
Confidence 3455 8899999999999999999999999987665543 3457777 999999999987777676788899999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.++++.+++.|+++++|+++++
T Consensus 160 ~~~-~~~~~~~~~~~i~~~~~t~~~~~ 185 (436)
T 3qov_A 160 VPA-AAGNSKRQIKFISDFKTTALHAI 185 (436)
T ss_dssp ECC-CSCCHHHHHHHHHHHTCCEEECC
T ss_pred EeC-CCCCHHHHHHHHHHHCCCEEEEC
Confidence 998 67899999999999999999864
No 34
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.73 E-value=3.1e-17 Score=130.43 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=80.0
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhh---hhcCCcCCCcEEEEeCCc-hhHHHHHHHHHHHHHhCCEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG---KRLEFDKTDHKILLQVPM-FHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl-~h~~g~~~~~~~~l~~G~~v 162 (190)
...++++++|+|||||||.||+|+++|+++..+..... ...++.+ +|++++.+|+ +|..|+.. .+.++..|+ +
T Consensus 87 ~~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~ 163 (369)
T 3hgu_A 87 GLPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRP-SGNTLAAIPTGPHIVGAIN-KERALRLGG-M 163 (369)
T ss_dssp TSCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCC-CCEEEECSCCTTCHHHHHH-HHHHHHTTS-C
T ss_pred cCCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCC-cceEEEecCCCchhhhHHH-HHHHHHcCC-E
Confidence 35788999999999999999999999999998877433 4556776 9999999999 99988655 556688898 5
Q ss_pred EEcCCCCChH-----------------------HHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPM-----------------------DSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~-----------------------~~~~~i~~~~iT~l~~t 189 (190)
++. .+++|. .+++.|+++++|++.++
T Consensus 164 v~~-~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~ 212 (369)
T 3hgu_A 164 FFS-IDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTT 212 (369)
T ss_dssp EEC-CCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred EEC-ccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeC
Confidence 555 578888 88889999999999864
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.72 E-value=3.2e-17 Score=133.32 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=84.1
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhh---hhcCCcCCCcEEEEeCCc-hhHHHHHHHHHHHHHhCCEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG---KRLEFDKTDHKILLQVPM-FHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl-~h~~g~~~~~~~~l~~G~~v 162 (190)
...++++++++|||||||.||||+++|+++..+..... ..+++.+ +|++++..|+ +|..+ ....+.++..|+++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~~~~~~~~~-~~~~~~~~~~G~~~ 165 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRP-GDTLHNAFGYGLFTGG-LGIHYGAERLGCMV 165 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCT-TCEEEECSCCSSSHHH-HHHHHHHHHHTCEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCC-CCEEEEeccCcccccH-HHHHHHHHHcCCEE
Confidence 45678999999999999999999999999887654433 2567777 9999999999 46655 44578889999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.++++.+++.|+++++|+++++
T Consensus 166 ~~~-~~~~~~~~~~~i~~~~~t~l~~~ 191 (443)
T 2y4o_A 166 VPM-SGGQTEKQVQLIRDFEPKIILVT 191 (443)
T ss_dssp ECC-CSCCHHHHHHHHHHHCCSEEEEC
T ss_pred EEC-CCCCHHHHHHHHHHhCCcEEEEC
Confidence 998 67899999999999999999864
No 36
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.72 E-value=3.8e-17 Score=132.63 Aligned_cols=100 Identities=16% Similarity=0.102 Sum_probs=84.4
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhh---hhcCCcCCCcEEEEeCCc-hhHHHHHHHHHHHHHhCCEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIG---KRLEFDKTDHKILLQVPM-FHTFGTAMGILNAMNHGSTT 162 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl-~h~~g~~~~~~~~l~~G~~v 162 (190)
...++++++++|||||||.||+|+++|+++..+..... ..+++.+ +|++++..|+ +|..++ ..++.++..|+++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~ 163 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARR-GDKVHVSYGYGLFTGGL-GAHYGAERAGLTV 163 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCT-TCEEEECSCCSSSHHHH-HHHHHHHHTTCEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCC-CCEEEEcccccccccch-HHHHHHHHcCCEE
Confidence 45678999999999999999999999999887654333 3567777 9999999998 677664 4478899999999
Q ss_pred EEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 163 VVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 163 v~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
++. +.++++.+++.|+++++|+++++
T Consensus 164 ~~~-~~~~~~~~~~~i~~~~~t~l~~~ 189 (437)
T 2y27_A 164 IPF-GGGQTEKQVQLIQDFRPDIIMVT 189 (437)
T ss_dssp ECC-CSCCHHHHHHHHHHHCCSEEEEC
T ss_pred EeC-CCCCHHHHHHHHHHhCCCEEEEC
Confidence 988 67899999999999999999864
No 37
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=94.03 E-value=0.86 Score=37.01 Aligned_cols=90 Identities=8% Similarity=-0.024 Sum_probs=70.0
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. .+-.+|.+.+.......+..+ ++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 18 ~~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vp 85 (509)
T 3ivr_A 18 LFPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDGVHT-GDRVAILSQNCSE--MIELIGAVALIGAILLP 85 (509)
T ss_dssp HSTTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSCHH--HHHHHHHHHHTTCEEEE
T ss_pred HCCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHhCCEEEe
Confidence 4678888664 134789999887776655443 6776 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+.++++...+++.++..++..
T Consensus 86 l~~~~~~~~l~~~l~~~~~~~vi~~ 110 (509)
T 3ivr_A 86 VNYRLNADEIAFVLGDGAPSVVVAG 110 (509)
T ss_dssp CCTTSCHHHHHHHHHHHCEEEEEEC
T ss_pred cCCCCCHHHHHHHHHhcCceEEEEC
Confidence 9888999999999999999988764
No 38
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=93.67 E-value=1.4 Score=37.21 Aligned_cols=96 Identities=18% Similarity=0.174 Sum_probs=72.1
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++... ..+| ..-.+|.+.+......++.. .++.+ +|++...+|-.-.. +..+++.+..|+..+..
T Consensus 89 ~pd~~Al~~~~-~~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~-Gd~V~i~~~~~~e~--vva~lA~~~~Gav~vpl 162 (652)
T 1pg4_A 89 NGDRTAIIWEG-DDTS--QSKHISYRELHRDVCRFANTLLDLGIKK-GDVVAIYMPMVPEA--AVAMLACARIGAVHSVI 162 (652)
T ss_dssp HTTSEEEEEEC-SSTT--CEEEEEHHHHHHHHHHHHHHHHHHTCCT-TCEEEEECCSSHHH--HHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEEc-CCCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHHH--HHHHHHHHHcCcEEEec
Confidence 46778876432 2122 23568999888766655543 47777 99999998876543 45578999999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEeccC
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
.+.+.++++...+++.++..++..|
T Consensus 163 ~~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 163 FGGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 8889999999999999999888654
No 39
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=93.33 E-value=1.2 Score=36.43 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=69.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++....| -.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 34 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~la~~~~Gav~vp 103 (536)
T 3ni2_A 34 NHSSKPCLINGANG-------DVYTYADVELTARRVASGLNKIGIQQ-GDVIMLFLPSSPE--FVLAFLGASHRGAIITA 103 (536)
T ss_dssp GSTTSEEEEETTTC-------CEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHHTCEEEE
T ss_pred cCCCceEEEECCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHH--HHHHHHHHHHhCCEEec
Confidence 36788876542222 468999888766655543 47776 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...++..++..++..
T Consensus 104 l~~~~~~~~l~~~l~~~~~~~~i~~ 128 (536)
T 3ni2_A 104 ANPFSTPAELAKHAKASRAKLLITQ 128 (536)
T ss_dssp CCTTCCHHHHHHHHHHHTEEEEEEC
T ss_pred cCCCCCHHHHHHHHHhcCCEEEEEC
Confidence 9888999999999999999988754
No 40
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=93.21 E-value=2.1 Score=35.19 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=70.9
Q ss_pred CCCCCeEEEEecCCC-CCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGT-TGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGT-TG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..|+.++++....+. .+. .-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+
T Consensus 31 ~~p~~~A~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~G~~~v 105 (549)
T 3g7s_A 31 KFGEKTAIISAEPKFPSEF--PESMNFLEICEVTKKLASGISRKGVRK-GEHVGVCIPNSID--YVMTIYALWRVAATPV 105 (549)
T ss_dssp HHTTSEEEEEESSCCCCSS--CSEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEE
T ss_pred hCCCceEEEeCCCcccccc--cceeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCCEEE
Confidence 356788876543221 111 2468888888766655543 46777 8998888886544 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++++...+++.++..++..
T Consensus 106 pl~~~~~~~~l~~il~~~~~~~~i~~ 131 (549)
T 3g7s_A 106 PINPMYKSFELEHILNDSEATTLVVH 131 (549)
T ss_dssp ECCTTCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 99888999999999999999988754
No 41
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=93.03 E-value=0.54 Score=38.69 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=69.0
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++.+..+.++ ..+|.+.+.......+.. .++.+ +|++...+|-.-. ++..+++.+..|+..+..
T Consensus 33 ~p~~~a~~a~~~~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl 105 (550)
T 3rix_A 33 YALVPGTIAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNT-NHRIVVCSENSLQ--FFMPVLGALFIGVAVAPA 105 (550)
T ss_dssp HHTSTTCEEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCT-TCEEEEECSSCTT--THHHHHHHHHHTCEEEEC
T ss_pred CCCCceEEEeeecCCC----cEeEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEcCCccc--HHHHHHHHHHcCCEEeec
Confidence 3455555544333333 468999888766655544 37777 8998888885543 345578999999999999
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++++...++..++..++..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~vi~~ 129 (550)
T 3rix_A 106 NDIYNERELLNSMNISQPTVVFVS 129 (550)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEEC
T ss_pred CCcCCHHHHHHHHHhcCCeEEEEc
Confidence 888999999999999999988764
No 42
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=92.97 E-value=1.7 Score=36.03 Aligned_cols=96 Identities=15% Similarity=0.027 Sum_probs=72.8
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++..... | ....+|.+.+......++.. .++.+ +|++...+|-.-. ++..+++.+..|+..+
T Consensus 67 ~~~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~-Gd~V~l~~~~~~e--~~~~~lA~~~~Gav~v 139 (580)
T 3etc_A 67 RDSPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVKHGIGK-GDYVMLTLKSRYD--FWYCMLGLHKLGAIAV 139 (580)
T ss_dssp HHCTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECTTCTH--HHHHHHHHHHHTCEEE
T ss_pred hhCCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHhCCEEEE
Confidence 347888887765331 2 24678998888766655543 47777 8999888886544 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++++...+++.++..++..
T Consensus 140 pl~~~~~~~~l~~~l~~~~~~~ii~~ 165 (580)
T 3etc_A 140 PATHMLKTRDIVYRIEKAGLKMIVCI 165 (580)
T ss_dssp ECCTTCCHHHHHHHHHHHTCCEEEEE
T ss_pred eCCccCCHHHHHHHHHhcCCCEEEEe
Confidence 98888999999999999999988753
No 43
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=92.91 E-value=1.7 Score=35.95 Aligned_cols=91 Identities=13% Similarity=0.076 Sum_probs=69.8
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++. . +-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+
T Consensus 86 ~~~pd~~A~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v 153 (570)
T 4gr5_A 86 ARAPDAVALLH-E--------ADELTYGALNERANRLAHRLVGLGVAP-GTLVGVHLERGFD--MVVALLAVLKAGGGYT 153 (570)
T ss_dssp HHCTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEE
T ss_pred HHCCCCeEEEC-C--------CCcEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHHCCEEE
Confidence 34678888664 1 2368999888766655543 46776 8998888886554 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++++...+++.++..++..
T Consensus 154 pl~~~~~~~~l~~~l~~~~~~~~i~~ 179 (570)
T 4gr5_A 154 MLDPQFPVERLALSLEDTGAPLLVTS 179 (570)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEEC
T ss_pred EcCCCChHHHHHHHHHhcCCCEEEec
Confidence 99888999999999999999988764
No 44
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=92.65 E-value=1.8 Score=36.61 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=72.5
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhh----hcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGK----RLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~----~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..|+.++++.... ..| ....+|.+.+......++. ..++.+ +|++...+|-.-- .+..+++.+..|+..+
T Consensus 94 ~~pd~~Al~~~~~-~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~-Gd~V~i~~~~~~e--~v~a~lA~~~~Gav~v 167 (663)
T 1ry2_A 94 KTPNKKAIIFEGD-EPG--QGYSITYKELLEEVCQVAQVLTYSMGVRK-GDTVAVYMPMVPE--AIITLLAISRIGAIHS 167 (663)
T ss_dssp TCTTSEEEEEECS-STT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCT-TCEEEECCCSSHH--HHHHHHHHHHTTCEEE
T ss_pred cCCCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEEE
Confidence 3577888765422 122 2346899888776655443 446666 9999999997654 3455799999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
...+.+.++.+...+++.++.++++.|
T Consensus 168 pl~~~~~~~~l~~~l~~~~~~~li~~~ 194 (663)
T 1ry2_A 168 VVFAGFSSNSLRDRINDGDSKVVITTD 194 (663)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred eeCCCCCHHHHHHHHHhcCCeEEEEcc
Confidence 988889999999999999999988754
No 45
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=92.62 E-value=2.2 Score=34.99 Aligned_cols=94 Identities=10% Similarity=0.047 Sum_probs=69.7
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++....+ .+-.+|.+.+.......+.. .++.+ +|++...++-... ++..+++.+..|+..+.
T Consensus 30 ~~p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vp 101 (541)
T 1v25_A 30 LFGRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRALGVGV-GDRVATLGFNHFR--HLEAYFAVPGMGAVLHT 101 (541)
T ss_dssp HSTTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEEE
T ss_pred hCCCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHH--HHHHHHHHHhcCcEEEe
Confidence 35677776543211 24568998888766555443 46776 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 102 l~~~~~~~~l~~~l~~~~~~~vi~~ 126 (541)
T 1v25_A 102 ANPRLSPKEIAYILNHAEDKVLLFD 126 (541)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEC
T ss_pred cCcccCHHHHHHHHHhCCCcEEEEC
Confidence 9888999999999999999988754
No 46
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=92.53 E-value=2.5 Score=34.28 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=68.8
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++... ++..+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 14 ~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~A~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vp 83 (504)
T 1t5h_X 14 RAPDHCALAVPA-------RGLRLTHAELRARVEAVAARLHADGLRP-QQRVAVVAPNSAD--VVIAILALHRLGAVPAL 83 (504)
T ss_dssp HCTTSEEEEETT-------TTEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSCHH--HHHHHHHHHHHTCEEEE
T ss_pred hCCCceEEEEcC-------CCceeEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCCHH--HHHHHHHHHHhCcEEEe
Confidence 367777766421 13568999888766655543 46776 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.++.+.++++...+++.++..++.
T Consensus 84 l~~~~~~~~l~~~l~~~~~~~~i~ 107 (504)
T 1t5h_X 84 LNPRLKSAELAELIKRGEMTAAVI 107 (504)
T ss_dssp ECTTSCHHHHHHHHHHTTCSEEEE
T ss_pred cCCccChHHHHHHHhhcCCcEEEE
Confidence 978899999999999999988775
No 47
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=92.34 E-value=2.6 Score=37.33 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=70.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++...+ +-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 73 ~~pd~~Al~~~~~-------~~~~TY~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~ns~e--~~v~~lA~~~~Ga~~vp 142 (979)
T 3tsy_A 73 EFATKPCLINGPT-------GHVYTYSDVHVISRQIAANFHKLGVNQ-NDVVMLLLPNCPE--FVLSFLAASFRGATATA 142 (979)
T ss_dssp GTTTSEEEEETTT-------CCEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECSSCHH--HHHHHHHHHHHTCEEEE
T ss_pred hCCCCeEEEECCC-------CcEEEHHHHHHHHHHHHHHHHHcCCCC-cCEEEEEeCCCHH--HHHHHHHHHHcCCEEEe
Confidence 3678888764222 2468998888766655543 47776 8998888886543 35557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 143 l~~~~~~~~l~~~l~~~~~~~vi~~ 167 (979)
T 3tsy_A 143 ANPFFTPAEIAKQAKASNTKLIITE 167 (979)
T ss_dssp ECTTSCHHHHHHHHHHHTEEEEEEC
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEEC
Confidence 9888999999999999999988764
No 48
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.32 E-value=1.7 Score=35.22 Aligned_cols=89 Identities=11% Similarity=0.038 Sum_probs=68.8
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCC
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPS 168 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~ 168 (190)
.|+.++++. - +-.+|.+.+.......+..+.-.+ +|++...+|-... ++..+++.+..|+..+...+.
T Consensus 14 ~pd~~Al~~-~--------~~~~Ty~eL~~~~~~lA~~L~~~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl~~~ 81 (501)
T 3ipl_A 14 NGHHIAITD-G--------QESYTYQNLYCEASLLAKRLKAYQ-QSRVGLYIDNSIQ--SIILIHACWLANIEIAMINTR 81 (501)
T ss_dssp HTTSEEEEC-S--------SCEEEHHHHHHHHHHHHHHHHTTC-CSEEEEECCSSHH--HHHHHHHHHHTTCEEEECCTT
T ss_pred cCCceEEEe-C--------CcEEEHHHHHHHHHHHHHHHHHcC-CCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCcc
Confidence 567777652 1 136899999887777666554335 8998888886544 345579999999999999888
Q ss_pred CChHHHHHHHHHCCceEEecc
Q psy13808 169 FKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 169 ~~~~~~~~~i~~~~iT~l~~t 189 (190)
+.++++...+++.++..++..
T Consensus 82 ~~~~~l~~~l~~~~~~~li~~ 102 (501)
T 3ipl_A 82 LTPNEMTNQMRSIDVQLIFCT 102 (501)
T ss_dssp SCHHHHHHHHHHTTCCEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEEc
Confidence 999999999999999988764
No 49
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=92.19 E-value=2.1 Score=35.36 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=68.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. . +-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 51 ~~p~~~Al~~-~--------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vp 118 (563)
T 1amu_A 51 KRPNNVAIVC-E--------NEQLTYHELNVKANQLARIFIEKGIGK-DTLVGIMMEKSID--LFIGILAVLKAGGAYVP 118 (563)
T ss_dssp HCTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEEE
T ss_pred HCCCCeEEEe-C--------CceecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEEE
Confidence 4677877653 1 2368998888766555443 47776 8998888885543 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 119 l~~~~~~~~l~~il~~~~~~~li~~ 143 (563)
T 1amu_A 119 IDIEYPKERIQYILDDSQARMLLTQ 143 (563)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEC
T ss_pred eCCCCcHHHHHHHHHhcCCCEEEEc
Confidence 9888999999999999999988753
No 50
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=92.09 E-value=2.3 Score=34.91 Aligned_cols=91 Identities=13% Similarity=0.040 Sum_probs=69.5
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++. .+-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+
T Consensus 41 ~~~p~~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~~--~~~~~lA~~~~Gav~v 108 (544)
T 3o83_A 41 QSHPHSLAIIC---------GERQLSYIELDRLSTNLATRLAEKGLGK-GDTALVQLPNVAE--FYIVFFALLKAGVVVL 108 (544)
T ss_dssp HHCTTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEECCCSSHH--HHHHHHHHHHHTCEEE
T ss_pred HhCCCceEEEc---------CCCceeHHHHHHHHHHHHHHHHHCCCCC-CCEEEEECCCCHH--HHHHHHHHHHhCcEEe
Confidence 34788888763 13468999888766655543 47777 8999888886544 3455789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+...++++...+++.++..++..
T Consensus 109 pl~~~~~~~~l~~~l~~~~~~~li~~ 134 (544)
T 3o83_A 109 NALYSHRQYELNAFIKQIQPKLLIGS 134 (544)
T ss_dssp ECCTTCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCCCHHHHHHHHHhcCeeEEEEc
Confidence 88788999999999999999988754
No 51
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=92.00 E-value=1.8 Score=35.17 Aligned_cols=78 Identities=6% Similarity=0.011 Sum_probs=62.0
Q ss_pred eEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 109 AFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
-.+|.+.+.......+.. .++.+ +|++...+|-.-. ++..+++.+..|+..+...+.+.++++...+++.++..
T Consensus 27 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~ 103 (503)
T 4fuq_A 27 DKISYAELVARAGRVANVLVARGLQV-GDRVAAQTEKSVE--ALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKI 103 (503)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSCHH--HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSE
T ss_pred cEEEHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCCHH--HHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 358999888766655543 37777 8998888886544 34557899999999999988899999999999999998
Q ss_pred Eecc
Q psy13808 186 YLTK 189 (190)
Q Consensus 186 l~~t 189 (190)
++..
T Consensus 104 vi~~ 107 (503)
T 4fuq_A 104 VVCD 107 (503)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8754
No 52
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=91.90 E-value=2.7 Score=34.40 Aligned_cols=90 Identities=12% Similarity=0.133 Sum_probs=68.1
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. + .-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 37 ~~p~~~A~~~---~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vp 104 (539)
T 1mdb_A 37 KYGDRIAITC---G------NTHWSYRELDTRADRLAAGFQKLGIQQ-KDRVVVQLPNIKE--FFEVIFALFRLGALPVF 104 (539)
T ss_dssp HHTTSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHHHTCCT-TCEEEECCCSSHH--HHHHHHHHHHHTCEEEE
T ss_pred HCCCCEEEEe---C------CCcccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHH--HHHHHHHHHHcCeEEec
Confidence 3567777653 1 2468998888766655543 47777 8999888886544 34557899999999888
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 105 l~~~~~~~~l~~~l~~~~~~~vi~~ 129 (539)
T 1mdb_A 105 ALPSHRSSEITYFCEFAEAAAYIIP 129 (539)
T ss_dssp CCTTCCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEec
Confidence 8788999999999999999888754
No 53
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=91.86 E-value=3.5 Score=34.05 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
.|+.++++.... .| ....+|.+.+.......+..+ ++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~-gd~V~i~~~n~~e--~~~~~lA~~~~Ga~~vp 128 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQR-GDRVAVVLPRVPE--WWLVILGCIRAGLIFMP 128 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCT-TCEEEEECCSCHH--HHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCC-CCEEEEEcCCCHH--HHHHHHHHHHcCeEEEe
Confidence 678888765431 12 235789988887665554432 6776 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...+++.++..++..
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~vi~~ 153 (570)
T 3c5e_A 129 GTIQMKSTDILYRLQMSKAKAIVAG 153 (570)
T ss_dssp CCTTCCHHHHHHHHHHHTCSEEEEE
T ss_pred cCCCCCHHHHHHHHHhcCCeEEEec
Confidence 8788999999999999999888764
No 54
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=91.43 E-value=1.9 Score=35.19 Aligned_cols=89 Identities=16% Similarity=0.161 Sum_probs=67.1
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.++++.. +-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+..
T Consensus 36 ~p~~~A~~~~---------~~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl 103 (529)
T 2v7b_A 36 RAGKTAYIDD---------TGSTTYGELEERARRFASALRTLGVHP-EERILLVMLDTVA--LPVAFLGALYAGVVPVVA 103 (529)
T ss_dssp GTTSEEEECS---------SCEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSTH--HHHHHHHHHHHTCEEEEC
T ss_pred cCCceEEEeC---------CCCccHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHH--HHHHHHHHHHcCceEEec
Confidence 5677776532 1358998888766655543 46776 8898888886544 344578999999999998
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+.+.++++...+++.++..++..
T Consensus 104 ~~~~~~~~l~~~l~~~~~~~vi~~ 127 (529)
T 2v7b_A 104 NTLLTPADYVYMLTHSHARAVIAS 127 (529)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCHHHHHHHHhccCCeEEEec
Confidence 788999999999999999888754
No 55
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=91.40 E-value=3.1 Score=33.88 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=69.9
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.. | +...+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 28 ~~p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vp 97 (517)
T 3r44_A 28 VSPRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLTALGIAK-GDRVALLMPNSVE--FCCLFYGAAKLGAVAVP 97 (517)
T ss_dssp HSTTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHHTCEEEE
T ss_pred hCCCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHHHcCCCC-cCEEEEEcCCCHH--HHHHHHHHHHhCcEEEe
Confidence 46788886643 1 22468999888766655543 47777 8998888886544 34557899999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+.++++...+++.++..++..
T Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~ 122 (517)
T 3r44_A 98 INTRLAAPEVSFILSDSGSKVVIYG 122 (517)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEEC
T ss_pred cCcccCHHHHHHHHHhcCceEEEEC
Confidence 9888999999999999999888753
No 56
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=91.07 E-value=2.5 Score=34.31 Aligned_cols=90 Identities=13% Similarity=0.062 Sum_probs=66.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++. . .-.+|.+.+.......+..+ +..+ +|++...++-... ++..+++.+..|+..+.
T Consensus 13 ~~p~~~A~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~g~~~-gd~V~i~~~n~~e--~~~~~la~~~~G~v~vp 80 (512)
T 3fce_A 13 ETPDQTAFVW-R--------DAKITYKQLKEDSDALAHWISSEYPDD-RSPIMVYGHMQPE--MIINFLGCVKAGHAYIP 80 (512)
T ss_dssp HSTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHHSTTC-CCCEEEEESSCHH--HHHHHHHHHHTTCCEEE
T ss_pred HCCCceEEEe-C--------CceEEHHHHHHHHHHHHHHHHHhCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEEe
Confidence 3677777653 1 13589988887666555443 6666 7887777765433 34557899999999998
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..+.+.++++...++..++..++..
T Consensus 81 l~~~~~~~~l~~il~~~~~~~~i~~ 105 (512)
T 3fce_A 81 VDLSIPADRVQRIAENSGAKLLLSA 105 (512)
T ss_dssp EETTSCHHHHHHHHHHSCCCEEEES
T ss_pred eCCCCcHHHHHHHHHhcCCCEEEec
Confidence 8788999999999999999988754
No 57
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=90.76 E-value=4.4 Score=32.33 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=68.8
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++.........-....+|.+.+.......+..+ +. + +|++...++-.-. ++..+++.+..|+..+.
T Consensus 36 ~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~-gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vp 111 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-T-GDRVVISAPQGLE--YVVAFLGALQAGRIAVP 111 (480)
T ss_dssp HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-T-TCEEEEECCSSHH--HHHHHHHHHHTTCEEEE
T ss_pred hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-C-CCEEEEEcCCcHH--HHHHHHHHHHhCcEEEe
Confidence 4678888776542111111336789999887776655444 43 4 8888888876544 34557899999999998
Q ss_pred cCC---CCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAP---SFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~---~~~~~~~~~~i~~~~iT~l~~t 189 (190)
... ....+++...+++.++..++..
T Consensus 112 l~~~~~~~~~~~l~~il~~~~~~~vi~~ 139 (480)
T 3t5a_A 112 LSVPQGGVTDERSDSVLSDSSPVAILTT 139 (480)
T ss_dssp ECSCCSCTTCCHHHHHHHHHCCSEEEEC
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEeC
Confidence 855 5678899999999999888764
No 58
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=90.64 E-value=2.8 Score=34.07 Aligned_cols=89 Identities=12% Similarity=-0.040 Sum_probs=65.8
Q ss_pred CCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEc
Q psy13808 89 NCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVP 165 (190)
Q Consensus 89 ~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~ 165 (190)
.|+.+++.. . +-.+|.+.+.......+.. .++.+ +|++...++-... ++..+++.+..|+..+..
T Consensus 17 ~p~~~a~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~g~~~-gd~V~i~~~n~~~--~~~~~lA~~~~G~v~vpl 84 (521)
T 3l8c_A 17 QADFPVYDC-L--------GERRTYGQLKRDSDSIAAFIDSLALLA-KSPVLVFGAQTYD--MLATFVALTKSGHAYIPV 84 (521)
T ss_dssp STTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTCCCT-TCCEEEEECSSHH--HHHHHHHHHHTTCCEEEE
T ss_pred CCCCcceec-C--------CCeecHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEEec
Confidence 567776543 1 2358898888766655543 46776 7877777765443 345578999999999988
Q ss_pred CCCCChHHHHHHHHHCCceEEecc
Q psy13808 166 APSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 166 ~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+...++++...++..++..++..
T Consensus 85 ~~~~~~~~l~~il~~~~~~~ii~~ 108 (521)
T 3l8c_A 85 DVHSAPERILAIIEIAKPSLIIAI 108 (521)
T ss_dssp ETTSCHHHHHHHHHHSCCSEEEES
T ss_pred CccccHHHHHHHHHhCCCCEEEec
Confidence 788999999999999999988764
No 59
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=90.25 E-value=4.6 Score=33.11 Aligned_cols=98 Identities=13% Similarity=0.020 Sum_probs=69.3
Q ss_pred cCCCCCeEEEEecCCCCCCCc--eeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPK--AAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGST 161 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PK--gv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 161 (190)
...|+.++++... +..+..+ .-.+|.+.+.......+..+ +. + +|++...+|-... ++..+++.+..|+.
T Consensus 31 ~~~p~~~A~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~-gd~V~i~~~n~~~--~~~~~lA~~~~Gav 105 (562)
T 3ite_A 31 KTHPEWKAVEVAT-GFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-H-GRAIAVSLDRSLI--AFAIIVGIMKSGNT 105 (562)
T ss_dssp HHCTTSEEEEEEE-CC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-S-SCEEEEECCSCHH--HHHHHHHHHHTTCE
T ss_pred HHCCCchhhhccc-ccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-C-CCEEEEEeCCCHH--HHHHHHHHHHhCCE
Confidence 3477888866543 2333332 34689988887666555433 45 5 8888888886544 34557899999999
Q ss_pred EEEcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 162 TVVPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 162 vv~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.+...+.+.++++...+++.++..++..
T Consensus 106 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~ 133 (562)
T 3ite_A 106 YVPIEAGLPNDRKSFLLRDSRAAMAFVC 133 (562)
T ss_dssp EEECCTTSCHHHHHHHHHHHTCSEEEEC
T ss_pred EEecCCcCHHHHHHHHHHhcCCCEEEEc
Confidence 9999888999999999999999887754
No 60
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=89.63 E-value=5.8 Score=33.22 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=68.9
Q ss_pred cCCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc---CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 87 SLNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL---EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 87 ~~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
...|+.++++. - .-.+|.+.+.......+..+ +..+ ++++...++-... ++..+++.+..|+..+
T Consensus 38 ~~~Pd~~Av~~-~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~-g~~V~i~~~~s~~--~vva~lailkaGa~~v 105 (620)
T 4dg8_A 38 ALHPHREAIRD-R--------FGSVDYRQLLDSAEQLSDYLLEHYPQP-GVCLGVYGEYSRE--SITCLLAILLSGHHYL 105 (620)
T ss_dssp HHCTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHHCCSS-CCEEEEESSSCHH--HHHHHHHHHHTTCEEE
T ss_pred HhCCCCeEEEc-C--------CCcCcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCCHH--HHHHHHHHHHhCCEEE
Confidence 34678888653 1 12589988887666555443 6776 8988888886544 3555789999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
..++...++++...+++.++..+..+
T Consensus 106 pld~~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 106 YIDLKQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp ECCTTSCHHHHHHHHHHHTEEEEEEC
T ss_pred eeCccChHHHHHHHHHhCCCcEEEec
Confidence 99888999999999999999988743
No 61
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=89.23 E-value=2.7 Score=34.48 Aligned_cols=78 Identities=10% Similarity=0.083 Sum_probs=61.5
Q ss_pred eEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceE
Q psy13808 109 AFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCME 185 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~ 185 (190)
..+|.+.+.......+.. .++.+ +|++...+|-.-. ++..+++.+..|+..+...+.+.++++...+++.++..
T Consensus 51 ~~~Ty~el~~~~~~lA~~L~~~Gv~~-gd~V~i~~~n~~e--~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ 127 (548)
T 2d1s_A 51 VDYSYAEYLEKSCCLGKALQNYGLVV-DGRIALCSENCEE--FFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTI 127 (548)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHTCCT-TCEEEEECSSCTT--THHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSE
T ss_pred CEeeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEeCCchh--HHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeE
Confidence 468998888766655543 47777 8888888875543 34457889999999999988899999999999999998
Q ss_pred Eecc
Q psy13808 186 YLTK 189 (190)
Q Consensus 186 l~~t 189 (190)
++..
T Consensus 128 vi~~ 131 (548)
T 2d1s_A 128 VFSS 131 (548)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8764
No 62
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=86.57 E-value=6.7 Score=31.74 Aligned_cols=90 Identities=13% Similarity=0.044 Sum_probs=65.0
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhhc----CCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKRL----EFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTV 163 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~----~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv 163 (190)
..|+.++++. . +-.+|.+.+.......+..+ +..+ ++++...++-.-. ++..+++.+..|+..+
T Consensus 13 ~~p~~~Al~~-~--------~~~~Ty~eL~~~~~~~A~~L~~~~~~~~-g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v 80 (511)
T 3e7w_A 13 TYPQTDAFRS-Q--------GQSLTYQELWEQSDRAAAAIQKRISGEK-KSPILVYGHMEPH--MIVSFLGSVKAGHPYI 80 (511)
T ss_dssp HSTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHTTTSCSSS-CCCEEEEESSCHH--HHHHHHHHHHHTCCEE
T ss_pred HCCCCeEEEc-C--------CceeeHHHHHHHHHHHHHHHHHhcCCCC-CCeEEEEecCCHH--HHHHHHHHHHhCCEEE
Confidence 3567777653 1 24689999887766655444 3334 6777776664332 3445788999999999
Q ss_pred EcCCCCChHHHHHHHHHCCceEEecc
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
...+.+.++++...+++.++..++..
T Consensus 81 pl~~~~~~~~l~~~l~~~~~~~li~~ 106 (511)
T 3e7w_A 81 PVDLSIPSERIAKIIESSGAELLIHA 106 (511)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEES
T ss_pred ecCCCChHHHHHHHHHhCCCCEEEec
Confidence 88788999999999999999988753
No 63
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=86.46 E-value=13 Score=30.90 Aligned_cols=88 Identities=9% Similarity=0.016 Sum_probs=66.9
Q ss_pred CCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcC
Q psy13808 90 CRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPA 166 (190)
Q Consensus 90 ~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~ 166 (190)
|+.++++. . .-.+|.+.+.......+.. .++.+ +|++...++-.-. ++..+++.+..|+..|...
T Consensus 39 pd~~Av~~-~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~-gd~V~l~~~~s~~--~vva~lA~l~aG~~~vpl~ 106 (617)
T 3rg2_A 39 SDSIAVID-G--------ERQLSYRELNQAADNLACSLRRQGIKP-GETALVQLGNVAE--LYITFFALLKLGVAPVLAL 106 (617)
T ss_dssp CCSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHHTCEEEEEC
T ss_pred CCCeEEec-C--------CceEeHHHHHHHHHHHHHHHHHcCCCC-CCEEEEECCCcHH--HHHHHHHHHhcCeEEccCC
Confidence 78887663 1 2358999888766655544 36776 8998888886544 3555899999999999887
Q ss_pred CCCChHHHHHHHHHCCceEEecc
Q psy13808 167 PSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 167 ~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
+....+++...+++.++..+...
T Consensus 107 ~~~~~~~l~~~l~~~~~~~vl~~ 129 (617)
T 3rg2_A 107 FSHQRSELNAYASQIEPALLIAD 129 (617)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEE
T ss_pred ccccHHHHHHHHhhcCceEEEec
Confidence 88899999999999999887753
No 64
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=85.18 E-value=11 Score=30.92 Aligned_cols=93 Identities=13% Similarity=0.025 Sum_probs=66.2
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++....+ .+-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+.
T Consensus 23 ~~p~~~a~~~~~~~-----~~~~~Ty~eL~~~~~~lA~~L~~~gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vp 94 (590)
T 3kxw_A 23 HSPNKKSCTFLNKE-----LEETMTYEQLDQHAKAIAATLQAEGAKP-GDRVLLLFAPGLP--LIQAFLGCLYAGCIAVP 94 (590)
T ss_dssp HCTTSEEEEEEETT-----EEEEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEEE
T ss_pred hCCCCeEEEEEcCC-----eeEEEcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCchh--HHHHHHHHHHhCcEEEE
Confidence 46788887655421 24578999888776655543 36776 8998888886544 34557899999999998
Q ss_pred cCCCC---ChHHHHHHHHHCCceEEec
Q psy13808 165 PAPSF---KPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 165 ~~~~~---~~~~~~~~i~~~~iT~l~~ 188 (190)
..+.. ..+++...++..++..++.
T Consensus 95 l~~~~~~~~~~~~~~~l~~~~~~~vi~ 121 (590)
T 3kxw_A 95 IYPPAQEKLLDKAQRIVTNSKPVIVLM 121 (590)
T ss_dssp ECCCCSHHHHHHHHHHHHHHCCSEEEE
T ss_pred ecCCCchHHHHHHHHHHHhCCCCEEEe
Confidence 85544 4467788888888877764
No 65
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=84.73 E-value=6.8 Score=32.03 Aligned_cols=79 Identities=15% Similarity=0.070 Sum_probs=60.2
Q ss_pred eeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCC-------hHHHHHH
Q psy13808 108 AAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFK-------PMDSLRA 177 (190)
Q Consensus 108 gv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~-------~~~~~~~ 177 (190)
.-.+|.+.+.......+.. .++.+ +|++...+|-... ++..+++.+..|+..+...+.+. .+++...
T Consensus 47 ~~~~Ty~eL~~~~~~lA~~L~~~Gv~~-gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~ 123 (576)
T 3gqw_A 47 EDQLEYQTLKARAEAGAKRLLSLNLKK-GDRVALIAETSSE--FVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGL 123 (576)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTCCCT-TCEEEEECCSSHH--HHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHH
T ss_pred eeEEcHHHHHHHHHHHHHHHHHcCCCC-CCEEEEEcCCcHH--HHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHH
Confidence 3578999888776655543 36776 8999888886554 34557899999999998866665 6888999
Q ss_pred HHHCCceEEecc
Q psy13808 178 IAKEKCMEYLTK 189 (190)
Q Consensus 178 i~~~~iT~l~~t 189 (190)
++..++..++..
T Consensus 124 l~~~~~~~ii~~ 135 (576)
T 3gqw_A 124 LASCQPAAIITG 135 (576)
T ss_dssp HHHHCCSEEEEC
T ss_pred HHhcCCCEEEec
Confidence 999998887754
No 66
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=81.36 E-value=0.31 Score=41.02 Aligned_cols=31 Identities=23% Similarity=0.142 Sum_probs=26.2
Q ss_pred CCCCCeEEEEecCCCC-CCCceeEechHHHHH
Q psy13808 88 LNCRDGINIQFTSGTT-GHPKAAFLTHYNLIN 118 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTT-G~PKgv~~sh~~~~~ 118 (190)
..++.+.++.-||||| |+||-+.+|...+-.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 4567778999999999 889999999987654
No 67
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=79.50 E-value=11 Score=30.49 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=58.1
Q ss_pred eEechHHHHHHHHHhhhhcCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 109 AFLTHYNLINNSNFIGKRLEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 109 v~~sh~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
-.+|.+.+.......+..+. . ++++...++-... ++..+++.+..|+..+..++.+.++++...+++.++..++.
T Consensus 47 ~~~Ty~eL~~~~~~~A~~L~--~-~~~V~i~~~~~~~--~~~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~ 121 (505)
T 3nyq_A 47 RSLTYAELAAAAGATAGRIG--G-AGRVAVWATPAME--TGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLA 121 (505)
T ss_dssp EEEEHHHHHHHHHHHHTTCC------CEEEECCSSHH--HHHHHHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEE
T ss_pred eeeeHHHHHHHHHHHHhhcc--C-CCEEEEEcCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEE
Confidence 46899999888777766553 3 6677776665443 34557899999999999988899999999999999998876
Q ss_pred c
Q psy13808 189 K 189 (190)
Q Consensus 189 t 189 (190)
.
T Consensus 122 ~ 122 (505)
T 3nyq_A 122 P 122 (505)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=79.39 E-value=17 Score=33.32 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=67.6
Q ss_pred CCCCCeEEEEecCCCCCCCceeEechHHHHHHHHHhhhh---cCCcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEE
Q psy13808 88 LNCRDGINIQFTSGTTGHPKAAFLTHYNLINNSNFIGKR---LEFDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVV 164 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~ 164 (190)
..|+.++++ +. +-.+|.+.+.......+.. .+..+ ++++...++-+.. ++..+++.+..|+..|.
T Consensus 476 ~~p~~~Av~-~~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~-g~~V~i~~~~s~~--~vv~~lailkaG~~~vp 543 (1304)
T 2vsq_A 476 ANPDAPALT-YS--------GQTLSYRELDEEANRIARRLQKHGAGK-GSVVALYTKRSLE--LVIGILGVLKAGAAYLP 543 (1304)
T ss_dssp HCTTSEEEE-SS--------SCEEEHHHHHHHHHHHHHHHHHTTCCT-TCEEEECCCSSHH--HHHHHHHHHHTTCEEEE
T ss_pred hCCCCeEEE-EC--------CeeEcHHHHHHHHHHHHHHHHhcCcCC-cCEEEEEeCCCHH--HHHHHHHHHHHCCEEEE
Confidence 356777754 21 2358888887766655543 46776 8998888886544 35568999999999999
Q ss_pred cCCCCChHHHHHHHHHCCceEEecc
Q psy13808 165 PAPSFKPMDSLRAIAKEKCMEYLTK 189 (190)
Q Consensus 165 ~~~~~~~~~~~~~i~~~~iT~l~~t 189 (190)
.++.+..+++...+++-++..+.+.
T Consensus 544 ldp~~p~~rl~~il~~~~~~~vl~~ 568 (1304)
T 2vsq_A 544 VDPKLPEDRISYMLADSAAACLLTH 568 (1304)
T ss_dssp CCTTSCHHHHHHHHHHHTCCEEEEC
T ss_pred ECCCCHHHHHHHHHHHcCCCEEEEC
Confidence 9888999999999999999887754
No 69
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=75.89 E-value=0.63 Score=38.93 Aligned_cols=31 Identities=32% Similarity=0.334 Sum_probs=26.0
Q ss_pred CCCCCeEEEEecCCCC-CCCceeEechHHHHH
Q psy13808 88 LNCRDGINIQFTSGTT-GHPKAAFLTHYNLIN 118 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTT-G~PKgv~~sh~~~~~ 118 (190)
..++.+.+..-||||| |++|-+.+|...+-.
T Consensus 95 L~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 95 LTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 4566778899999999 889999999987654
No 70
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=74.74 E-value=1.1 Score=37.47 Aligned_cols=31 Identities=26% Similarity=0.271 Sum_probs=26.2
Q ss_pred CCCCCeEEEEecCCCC-CCCceeEechHHHHH
Q psy13808 88 LNCRDGINIQFTSGTT-GHPKAAFLTHYNLIN 118 (190)
Q Consensus 88 ~~~~~~~~i~~TSGTT-G~PKgv~~sh~~~~~ 118 (190)
.-++.+.+..-||||| |++|-+.+|...+-.
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 4567778999999999 789999999987654
No 71
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=43.86 E-value=6.8 Score=30.98 Aligned_cols=27 Identities=11% Similarity=-0.060 Sum_probs=23.9
Q ss_pred CcccccccCCCCCCccchhhhhhccCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
=++||.++|.|.++++.+..+|+..+.
T Consensus 39 Y~~GD~l~v~p~N~~~~V~~~l~~l~l 65 (393)
T 4dql_A 39 YQEGDHLGVIPRNYEGIVNRVTARFGL 65 (393)
T ss_dssp CCTTCEEEECCCCCHHHHHHHHHHHTC
T ss_pred cCCCCEEEEEccCCHHHHHHHHHHhCc
Confidence 379999999999999999999987753
No 72
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=42.28 E-value=7.8 Score=30.36 Aligned_cols=27 Identities=7% Similarity=-0.074 Sum_probs=24.5
Q ss_pred cccccccCCCCCCccchhhhhhccCCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPGR 36 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~~ 36 (190)
++||.++|-|.++++.+..+|+..+..
T Consensus 46 ~~GD~l~v~p~N~~~~V~~~l~~l~~~ 72 (374)
T 1ddg_A 46 QPGDALGVWYQNDPALVKELVELLWLK 72 (374)
T ss_dssp CTTCEEEECCCCCHHHHHHHHHHTTCC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 899999999999999999999887753
No 73
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=42.17 E-value=8.2 Score=30.93 Aligned_cols=25 Identities=12% Similarity=0.011 Sum_probs=23.5
Q ss_pred cccccccCCCCCCccchhhhhhccC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRP 34 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~ 34 (190)
++||.++|-|.+++++++.+|+..+
T Consensus 66 ~~GD~l~V~p~N~~~~V~~~l~~l~ 90 (435)
T 1f20_A 66 QPGDHLGVFPGNHEDLVNALIERLE 90 (435)
T ss_dssp CTTCEEEECCCCCHHHHHHHHTTBS
T ss_pred CCCCEEEEEecCCHHHHHHHHHHhC
Confidence 7999999999999999999999884
No 74
>3ikb_A Uncharacterized conserved protein; APC63946, streptococcus mutans UA159, structural genomics, PSI-2, protein structure initiative; HET: FLC; 1.67A {Streptococcus mutans}
Probab=39.01 E-value=8.4 Score=27.42 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=22.0
Q ss_pred CcccccCCCcccccccCCCCCCccchhhhhhccCC-CCCCCC
Q psy13808 1 MVLSSRNRGEKEDRIGESQPFRERTLSHQDKIRPG-RESNPR 41 (190)
Q Consensus 1 ~~~~~~~~~~~~~~v~i~p~~~~~~l~~~l~~~~~-~~i~~~ 41 (190)
|+||.-..++.|||-+- +...+.-+.+.++..++ ++||+-
T Consensus 88 ~~~C~Pp~~k~g~~pp~-~~c~~~~l~~~i~l~~p~~liv~l 128 (198)
T 3ikb_A 88 MDFYYPGKGKSGDLPPR-KGFAQKWHQPILDLLPDIQLTILI 128 (198)
T ss_dssp SCSSCCCBCSSSBCCCC-TTHHHHHHHHHHTTCTTCCEEEEE
T ss_pred eeeecCCCCCCCCCCch-HHHHHHHHHHHHHhCCCCeEEEEe
Confidence 56888777777888774 22222234555555554 544433
No 75
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=38.62 E-value=9.1 Score=30.98 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=24.1
Q ss_pred CcccccccCCCCCCccchhhhhhccCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
=++||.+||.|.++++.+..+|+..+.
T Consensus 95 Y~~GD~l~V~p~N~~~~V~~~l~~l~~ 121 (458)
T 3qfs_A 95 YESGDHVAVYPANDSALVNQLGKILGA 121 (458)
T ss_dssp CCTTCEEEECCCCCHHHHHHHHHHHTC
T ss_pred cCCCCEEEEEeeCCHHHHHHHHHHhCc
Confidence 389999999999999999999988763
No 76
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=37.04 E-value=80 Score=22.41 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|..+--..--..|..++.......++++++.++++++..+..
T Consensus 104 ~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 104 IHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp CCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEE
T ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 6888865533444578999988866789999999999999987654
No 77
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=33.62 E-value=11 Score=31.16 Aligned_cols=27 Identities=7% Similarity=-0.109 Sum_probs=24.3
Q ss_pred CcccccccCCCCCCccchhhhhhccCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
=++||.++|.|.++++++..+|+..+-
T Consensus 148 Y~~GD~l~V~P~N~~~~V~~~l~~lgl 174 (539)
T 2qtl_A 148 YQPGDAFSVICPNSDSEVQSLLQRLQL 174 (539)
T ss_dssp CCTTCEEEEECCCCHHHHHHHHHHTTC
T ss_pred cCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 389999999999999999999988874
No 78
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=33.29 E-value=4.5 Score=29.08 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=14.2
Q ss_pred cCCCCCCCceeEechHHHH
Q psy13808 99 TSGTTGHPKAAFLTHYNLI 117 (190)
Q Consensus 99 TSGTTG~PKgv~~sh~~~~ 117 (190)
+|+.|| ||||+-..+.+-
T Consensus 3 ~~~~tg-pkgvi~d~~~~~ 20 (217)
T 2trc_P 3 QATHTG-PKGVINDWRKFK 20 (217)
T ss_dssp SCCSSH-HHHHHHHHHHHH
T ss_pred CCCCCC-cchHHHHHHHHH
Confidence 567777 999998887766
No 79
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=33.19 E-value=14 Score=31.04 Aligned_cols=26 Identities=15% Similarity=0.121 Sum_probs=23.9
Q ss_pred cccccccCCCCCCccchhhhhhccCC
Q psy13808 10 EKEDRIGESQPFRERTLSHQDKIRPG 35 (190)
Q Consensus 10 ~~~~~v~i~p~~~~~~l~~~l~~~~~ 35 (190)
++||.++|.|.++++.++.+|+..+.
T Consensus 256 ~~GD~l~V~p~N~~~~V~~~l~~l~l 281 (618)
T 3qe2_A 256 ESGDHVAVYPANDSALVNQLGKILGA 281 (618)
T ss_dssp CTTCEEEECCCCCHHHHHHHHHHTTC
T ss_pred ccCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 79999999999999999999988764
No 80
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=30.12 E-value=17 Score=31.09 Aligned_cols=26 Identities=12% Similarity=-0.041 Sum_probs=23.8
Q ss_pred CcccccccCCCCCCccchhhhhhccC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRP 34 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~ 34 (190)
=++||.++|.|.++++++..+|+..+
T Consensus 286 Y~~GD~l~V~P~N~~~~V~~~l~~l~ 311 (688)
T 1tll_A 286 YQPGDHLGVFPGNHEDLVNALIERLE 311 (688)
T ss_dssp CCTTCEEEECCCCCHHHHHHHHTTCS
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHhC
Confidence 37999999999999999999999885
No 81
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=30.08 E-value=14 Score=31.54 Aligned_cols=28 Identities=7% Similarity=-0.179 Sum_probs=24.5
Q ss_pred CcccccccCCCCCCccchhhhhhccCCC
Q psy13808 9 GEKEDRIGESQPFRERTLSHQDKIRPGR 36 (190)
Q Consensus 9 ~~~~~~v~i~p~~~~~~l~~~l~~~~~~ 36 (190)
=++||.++|.|.++++++..+|+..+-.
T Consensus 292 Y~~GD~l~V~P~N~~~~V~~~l~~l~l~ 319 (682)
T 2bpo_A 292 YSTGDHLAVWPSNPLEKVEQFLSIFNLD 319 (682)
T ss_dssp CCTTCEEEECCCCCHHHHHHHHHHHTCC
T ss_pred ecCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 3799999999999999999999887643
No 82
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=28.10 E-value=1.2e+02 Score=21.10 Aligned_cols=46 Identities=15% Similarity=0.070 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 143 FHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 143 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
.|..|..+--..--..|..++.......++.+.+.++++++..+..
T Consensus 100 ~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~l 145 (210)
T 1y80_A 100 LHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGM 145 (210)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 6777754422333367888887766678899999999998887654
No 83
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=27.01 E-value=66 Score=18.10 Aligned_cols=27 Identities=11% Similarity=0.102 Sum_probs=20.5
Q ss_pred EcCCCCChHHHHHHHHHCCceEEeccC
Q psy13808 164 VPAPSFKPMDSLRAIAKEKCMEYLTKD 190 (190)
Q Consensus 164 ~~~~~~~~~~~~~~i~~~~iT~l~~t~ 190 (190)
..++.-+..+.++.+.++++..+...|
T Consensus 4 tv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 4 VVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 344677888999999999988776543
No 84
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.98 E-value=1.3e+02 Score=19.36 Aligned_cols=47 Identities=17% Similarity=0.005 Sum_probs=32.9
Q ss_pred chhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 142 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
-.|..|..+--..--..|..++.......++++.+.++++++..+..
T Consensus 14 d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~l 60 (137)
T 1ccw_A 14 DCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILV 60 (137)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEE
T ss_pred chhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEE
Confidence 36777755433333467888886645578999999999998887654
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.00 E-value=1.8e+02 Score=19.36 Aligned_cols=47 Identities=15% Similarity=-0.023 Sum_probs=32.1
Q ss_pred chhHHHHHHHHHHHHHhCCEEEEcCCCCChHHHHHHHHHCCceEEec
Q psy13808 142 MFHTFGTAMGILNAMNHGSTTVVPAPSFKPMDSLRAIAKEKCMEYLT 188 (190)
Q Consensus 142 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~iT~l~~ 188 (190)
=.|..|..+--..--..|..++.......++.+.+.++++++.++..
T Consensus 29 d~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~l 75 (161)
T 2yxb_A 29 DGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGV 75 (161)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEE
T ss_pred CccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEE
Confidence 36777754422222346788887755678899999999998887654
No 86
>2eki_A DRG 1, developmentally-regulated GTP-binding protein 1; protein NEDD3, neural precursor cell expressed developmentally DOWN-regulated protein 3; NMR {Homo sapiens}
Probab=20.75 E-value=37 Score=20.93 Aligned_cols=28 Identities=11% Similarity=0.203 Sum_probs=21.9
Q ss_pred cCCCcc--cccccCCCCCCccchhhhhhcc
Q psy13808 6 RNRGEK--EDRIGESQPFRERTLSHQDKIR 33 (190)
Q Consensus 6 ~~~~~~--~~~v~i~p~~~~~~l~~~l~~~ 33 (190)
|+..+| |-|||.+..+..+++..++...
T Consensus 59 wG~saK~~~qrVgldh~L~d~DVV~Iv~~~ 88 (93)
T 2eki_A 59 WGLSVKHNPQKVGKDHTLEDEDVIQIVKKS 88 (93)
T ss_dssp BSTTSSSSSEEECSSCCCCSSEEECEEECC
T ss_pred ecccccCCCEECCCCcEecCCCEEEEEeCC
Confidence 666664 8999999999999887776553
No 87
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=20.52 E-value=2.8e+02 Score=20.97 Aligned_cols=53 Identities=13% Similarity=-0.030 Sum_probs=35.7
Q ss_pred CcCCCcEEEEeCCchhHHHHHHHHHHHHHhCCEEEEcCC----CCChHHHHHHHHHC--CceEEe
Q psy13808 129 FDKTDHKILLQVPMFHTFGTAMGILNAMNHGSTTVVPAP----SFKPMDSLRAIAKE--KCMEYL 187 (190)
Q Consensus 129 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~vv~~~~----~~~~~~~~~~i~~~--~iT~l~ 187 (190)
..+ +|.++...|-++.....+ ...|+.++..+- ..+++.+.+.+++. ++..++
T Consensus 69 ~~~-gd~Vl~~~~~~~~~~~~~-----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~ 127 (394)
T 1o69_A 69 VKQ-DDIVLASSFTFIASVAPI-----CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALI 127 (394)
T ss_dssp CCT-TCEEEEESSSCGGGTHHH-----HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEE
T ss_pred CCC-CCEEEECCCccHHHHHHH-----HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEE
Confidence 455 889999999888764322 236888887642 25888888888875 444443
Done!