Query psy1381
Match_columns 102
No_of_seqs 107 out of 966
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 21:04:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxd_A Alpha-L-fucosidase, put 100.0 1.1E-38 3.9E-43 260.9 11.8 94 5-99 74-167 (455)
2 2wvv_A Alpha-L-fucosidase; alp 100.0 1E-35 3.5E-40 242.6 8.1 89 10-99 51-140 (450)
3 3eyp_A Putative alpha-L-fucosi 100.0 1.1E-31 3.6E-36 220.3 6.1 76 23-99 40-119 (469)
4 3ues_A Alpha-1,3/4-fucosidase; 100.0 2.1E-30 7.2E-35 213.4 7.1 78 20-99 45-127 (478)
5 3gza_A Putative alpha-L-fucosi 100.0 6.9E-30 2.4E-34 208.9 8.4 70 29-99 52-124 (443)
6 4h41_A Putative alpha-L-fucosi 99.7 8.1E-18 2.8E-22 133.9 4.7 70 28-99 43-115 (340)
7 1kwg_A Beta-galactosidase; TIM 79.5 1 3.4E-05 37.3 2.6 58 30-99 5-66 (645)
8 3rpc_A Possible metal-dependen 77.5 5.4 0.00019 28.6 5.8 50 32-99 201-250 (264)
9 3kws_A Putative sugar isomeras 77.1 1.6 5.6E-05 31.2 2.9 55 39-99 107-161 (287)
10 3lmz_A Putative sugar isomeras 75.0 4.6 0.00016 28.5 4.7 17 83-99 112-128 (257)
11 3vup_A Beta-1,4-mannanase; TIM 74.4 5.5 0.00019 27.9 5.0 57 39-98 45-104 (351)
12 3tty_A Beta-GAL, beta-galactos 71.4 5.8 0.0002 33.3 5.2 59 30-99 14-75 (675)
13 3cqj_A L-ribulose-5-phosphate 70.9 2.1 7.1E-05 30.8 2.1 51 39-98 111-161 (295)
14 3dhu_A Alpha-amylase; structur 68.8 7.2 0.00025 30.2 4.9 58 40-98 34-98 (449)
15 3p6l_A Sugar phosphate isomera 68.0 8.7 0.0003 27.0 4.8 16 83-98 114-129 (262)
16 4aie_A Glucan 1,6-alpha-glucos 67.4 7.5 0.00026 30.4 4.8 56 42-98 38-94 (549)
17 3a24_A Alpha-galactosidase; gl 65.9 16 0.00056 31.0 6.8 50 39-98 312-361 (641)
18 2zds_A Putative DNA-binding pr 65.4 13 0.00045 26.8 5.5 54 39-98 114-174 (340)
19 1yx1_A Hypothetical protein PA 65.1 14 0.00049 26.0 5.6 14 85-98 113-126 (264)
20 1lwj_A 4-alpha-glucanotransfer 64.4 10 0.00035 29.4 5.0 56 41-98 28-84 (441)
21 1ht6_A AMY1, alpha-amylase iso 64.4 13 0.00044 28.6 5.5 56 41-98 26-83 (405)
22 3ngf_A AP endonuclease, family 64.1 2.7 9.2E-05 30.0 1.5 51 39-99 96-146 (269)
23 2q02_A Putative cytoplasmic pr 63.9 5.6 0.00019 27.9 3.1 46 39-98 88-134 (272)
24 1zja_A Trehalulose synthase; s 63.8 9.1 0.00031 30.8 4.7 59 40-99 36-95 (557)
25 3vni_A Xylose isomerase domain 63.7 3.4 0.00011 29.5 1.9 55 40-99 92-147 (294)
26 1ea9_C Cyclomaltodextrinase; h 62.9 13 0.00044 30.2 5.5 57 40-98 176-233 (583)
27 3nvt_A 3-deoxy-D-arabino-heptu 62.1 11 0.00038 29.9 4.9 51 38-99 158-208 (385)
28 1uuq_A Mannosyl-oligosaccharid 61.9 9.1 0.00031 29.7 4.3 55 39-98 65-125 (440)
29 2zic_A Dextran glucosidase; TI 61.5 8 0.00027 31.1 4.0 59 40-99 35-94 (543)
30 3aj7_A Oligo-1,6-glucosidase; 59.0 12 0.00043 30.4 4.8 59 40-99 44-103 (589)
31 1m53_A Isomaltulose synthase; 58.8 9.5 0.00033 30.8 4.0 58 40-98 49-107 (570)
32 3cu2_A Ribulose-5-phosphate 3- 58.6 7.8 0.00027 28.6 3.2 21 36-56 79-99 (237)
33 1j0h_A Neopullulanase; beta-al 58.5 13 0.00045 30.2 4.8 58 40-99 180-238 (588)
34 2ze0_A Alpha-glucosidase; TIM 58.4 9.4 0.00032 30.7 3.9 59 40-99 35-94 (555)
35 4e38_A Keto-hydroxyglutarate-a 58.3 9 0.00031 28.4 3.5 38 34-99 92-129 (232)
36 3ctl_A D-allulose-6-phosphate 58.0 3.6 0.00012 30.2 1.3 20 37-56 68-87 (231)
37 3lmz_A Putative sugar isomeras 57.9 16 0.00053 25.7 4.6 48 35-99 29-76 (257)
38 1vs1_A 3-deoxy-7-phosphoheptul 57.6 17 0.00058 27.5 5.0 50 39-99 55-104 (276)
39 3p6l_A Sugar phosphate isomera 57.3 17 0.0006 25.3 4.8 25 35-59 21-45 (262)
40 3m07_A Putative alpha amylase; 57.1 16 0.00053 30.3 5.1 58 41-99 159-218 (618)
41 1wzl_A Alpha-amylase II; pullu 57.1 14 0.00048 29.9 4.8 58 40-99 177-235 (585)
42 1uok_A Oligo-1,6-glucosidase; 57.1 11 0.00036 30.4 4.0 58 40-98 35-93 (558)
43 1gzs_B SOPE; toxin/cell cycle, 56.7 4.9 0.00017 28.7 1.7 18 84-101 64-81 (165)
44 2yxo_A Histidinol phosphatase; 56.0 10 0.00035 26.8 3.4 26 35-61 15-40 (267)
45 4fnq_A Alpha-galactosidase AGA 56.0 65 0.0022 27.2 8.8 51 39-98 349-406 (729)
46 3can_A Pyruvate-formate lyase- 55.7 31 0.001 23.0 5.7 61 38-99 112-177 (182)
47 1m7x_A 1,4-alpha-glucan branch 55.5 16 0.00054 30.0 4.9 58 41-99 161-220 (617)
48 1vli_A Spore coat polysacchari 55.1 27 0.00092 27.9 6.0 63 37-99 45-116 (385)
49 2vr5_A Glycogen operon protein 54.8 20 0.00067 30.2 5.4 59 40-99 206-282 (718)
50 1i60_A IOLI protein; beta barr 54.7 5.3 0.00018 27.9 1.6 52 39-99 87-138 (278)
51 2jok_A Putative G-nucleotide e 53.6 6.1 0.00021 28.7 1.8 17 85-101 70-86 (186)
52 2v4x_A JSRV capsid, capsid pro 53.1 6.7 0.00023 27.5 1.9 20 80-99 13-32 (140)
53 2qlc_A DNA repair protein RADC 53.1 12 0.00042 25.2 3.2 58 30-99 48-105 (126)
54 1g5a_A Amylosucrase; glycosylt 53.0 27 0.00092 28.8 5.9 59 40-99 117-178 (628)
55 3dx5_A Uncharacterized protein 52.6 6.4 0.00022 27.9 1.8 52 39-99 87-138 (286)
56 3inp_A D-ribulose-phosphate 3- 52.3 7.4 0.00025 29.0 2.2 22 36-57 96-117 (246)
57 3tva_A Xylose isomerase domain 51.6 8.5 0.00029 27.4 2.4 50 39-99 105-154 (290)
58 1gjw_A Maltodextrin glycosyltr 51.4 11 0.00037 31.0 3.2 61 39-99 123-197 (637)
59 4gqr_A Pancreatic alpha-amylas 51.1 13 0.00045 28.2 3.5 56 40-99 27-92 (496)
60 1m65_A Hypothetical protein YC 51.0 13 0.00043 26.0 3.2 25 36-61 18-42 (245)
61 4gj1_A 1-(5-phosphoribosyl)-5- 51.0 12 0.00042 27.2 3.2 48 32-93 147-194 (243)
62 1jvn_A Glutamine, bifunctional 50.9 12 0.00043 30.6 3.5 29 35-63 451-479 (555)
63 1vr6_A Phospho-2-dehydro-3-deo 50.3 22 0.00076 27.9 4.7 50 39-99 123-172 (350)
64 4awe_A Endo-beta-D-1,4-mannana 49.7 32 0.0011 24.0 5.1 20 36-55 37-56 (387)
65 3edf_A FSPCMD, cyclomaltodextr 49.4 21 0.0007 29.1 4.6 59 39-98 151-213 (601)
66 1k77_A EC1530, hypothetical pr 49.0 7 0.00024 27.2 1.5 51 39-98 88-138 (260)
67 2kgf_A Capsid protein P27; ret 48.9 8.5 0.00029 26.9 1.9 20 80-99 18-37 (140)
68 1ud2_A Amylase, alpha-amylase; 48.3 22 0.00076 27.7 4.5 59 39-99 26-96 (480)
69 3vgf_A Malto-oligosyltrehalose 47.4 17 0.00059 29.4 3.8 59 40-99 123-183 (558)
70 2ya0_A Putative alkaline amylo 47.3 39 0.0013 28.2 6.0 57 42-99 186-270 (714)
71 1zco_A 2-dehydro-3-deoxyphosph 47.3 31 0.0011 25.6 5.0 50 39-99 40-89 (262)
72 1p7n_A GAG polyprotein capsid 47.2 8.9 0.00031 27.8 1.9 18 82-99 44-61 (176)
73 3u0h_A Xylose isomerase domain 47.0 6 0.0002 27.8 0.9 51 39-99 87-137 (281)
74 1ji1_A Alpha-amylase I; beta/a 46.9 23 0.00078 29.0 4.5 57 40-98 195-255 (637)
75 1hvx_A Alpha-amylase; hydrolas 46.4 27 0.00093 27.7 4.8 58 39-99 27-97 (515)
76 3aml_A OS06G0726400 protein; s 46.3 24 0.0008 30.2 4.6 60 39-99 205-266 (755)
77 3k1d_A 1,4-alpha-glucan-branch 46.0 26 0.0009 29.8 4.9 59 40-99 268-328 (722)
78 2wqp_A Polysialic acid capsule 45.7 24 0.00081 27.8 4.2 62 38-99 37-106 (349)
79 2anu_A Hypothetical protein TM 45.6 18 0.00063 25.9 3.4 28 32-59 31-58 (255)
80 1tqj_A Ribulose-phosphate 3-ep 45.5 7.3 0.00025 28.1 1.2 23 36-58 72-94 (230)
81 2bhu_A Maltooligosyltrehalose 45.3 24 0.00082 29.0 4.4 58 41-99 149-208 (602)
82 1gcy_A Glucan 1,4-alpha-maltot 44.7 51 0.0018 26.2 6.2 58 40-99 41-108 (527)
83 2c0h_A Mannan endo-1,4-beta-ma 44.4 35 0.0012 24.8 4.8 56 39-99 48-106 (353)
84 1vjn_A Zn-dependent hydrolase 43.7 27 0.00091 24.6 4.0 51 34-100 150-200 (220)
85 3czg_A Sucrose hydrolase; (alp 43.7 30 0.001 28.5 4.8 59 40-99 110-171 (644)
86 1ua7_A Alpha-amylase; beta-alp 43.7 16 0.00054 28.2 2.9 59 40-99 21-90 (422)
87 2do1_A Nuclear protein HCC-1; 43.6 14 0.00046 21.9 2.0 18 84-101 13-30 (55)
88 3bh4_A Alpha-amylase; calcium, 43.6 29 0.00099 27.1 4.5 61 39-99 24-94 (483)
89 4ad1_A Glycosyl hydrolase fami 43.5 33 0.0011 26.9 4.8 82 12-98 171-279 (380)
90 3l4y_A Maltase-glucoamylase, i 43.5 20 0.0007 31.3 3.8 27 30-56 338-365 (875)
91 1wpc_A Glucan 1,4-alpha-maltoh 43.1 30 0.001 27.0 4.5 59 39-99 28-98 (485)
92 1qnr_A Endo-1,4-B-D-mannanase; 43.0 38 0.0013 24.5 4.8 56 38-98 38-104 (344)
93 2f2h_A Putative family 31 gluc 42.8 20 0.00068 30.7 3.6 28 30-57 319-347 (773)
94 2g3m_A Maltase, alpha-glucosid 42.6 22 0.00077 29.9 3.9 27 30-56 223-250 (693)
95 1g94_A Alpha-amylase; beta-alp 42.3 34 0.0012 26.5 4.7 56 41-99 20-80 (448)
96 1em9_A GAG polyprotein capsid 42.3 11 0.00036 27.0 1.6 18 82-99 15-32 (154)
97 4evu_A Putative periplasmic pr 42.2 30 0.001 21.5 3.5 21 39-59 37-57 (72)
98 2aaa_A Alpha-amylase; glycosid 42.2 21 0.00073 27.8 3.5 61 39-99 46-113 (484)
99 2w6r_A Imidazole glycerol phos 42.1 20 0.00068 25.6 3.1 27 36-62 156-182 (266)
100 3ff4_A Uncharacterized protein 42.0 23 0.00079 23.3 3.2 47 27-99 61-107 (122)
101 2wsk_A Glycogen debranching en 42.0 18 0.00061 30.0 3.2 59 40-99 183-257 (657)
102 3bc8_A O-phosphoseryl-tRNA(SEC 41.7 49 0.0017 26.6 5.6 48 34-99 180-230 (450)
103 1qo2_A Molecule: N-((5-phospho 41.6 16 0.00055 25.8 2.5 29 34-62 142-170 (241)
104 3zss_A Putative glucanohydrola 41.5 38 0.0013 28.7 5.1 60 39-98 256-335 (695)
105 3pzt_A Endoglucanase; alpha/be 41.2 43 0.0015 25.0 4.9 52 35-98 68-119 (327)
106 3k8k_A Alpha-amylase, SUSG; al 40.8 44 0.0015 28.0 5.4 59 39-99 63-122 (669)
107 1h1j_S THO1 protein; SAP domai 40.8 19 0.00066 20.8 2.3 16 86-101 10-25 (51)
108 3qaj_A Glutamine synthetase; A 40.7 97 0.0033 24.8 7.2 68 32-100 102-183 (444)
109 1cee_B Wiskott-aldrich syndrom 40.5 13 0.00045 21.9 1.6 14 38-51 35-48 (59)
110 1mxg_A Alpha amylase; hyperthe 40.5 38 0.0013 26.3 4.7 60 38-99 30-102 (435)
111 2qul_A D-tagatose 3-epimerase; 40.2 13 0.00045 26.1 1.9 56 39-98 91-147 (290)
112 2whl_A Beta-mannanase, baman5; 40.0 70 0.0024 22.9 5.8 46 38-98 33-78 (294)
113 1wza_A Alpha-amylase A; hydrol 39.6 22 0.00075 27.8 3.2 52 46-99 45-97 (488)
114 2z1k_A (NEO)pullulanase; hydro 38.9 21 0.0007 27.8 2.9 58 40-99 54-112 (475)
115 1bf2_A Isoamylase; hydrolase, 38.6 48 0.0017 28.0 5.3 57 42-99 211-288 (750)
116 1zrj_A E1B-55KDA-associated pr 38.5 22 0.00076 20.5 2.3 17 85-101 14-30 (50)
117 3qxb_A Putative xylose isomera 38.3 18 0.0006 26.3 2.3 56 31-99 29-85 (316)
118 3nsx_A Alpha-glucosidase; stru 38.2 26 0.00091 29.4 3.7 30 30-59 211-241 (666)
119 2h6l_A Hypothetical protein; N 38.1 17 0.00059 24.5 2.1 25 76-100 13-37 (146)
120 4aee_A Alpha amylase, catalyti 38.0 19 0.00066 29.9 2.8 59 39-99 268-327 (696)
121 2ya1_A Putative alkaline amylo 37.9 62 0.0021 28.5 6.1 57 42-99 493-577 (1014)
122 2guy_A Alpha-amylase A; (beta- 37.8 29 0.00099 27.0 3.6 60 40-99 47-113 (478)
123 2hk0_A D-psicose 3-epimerase; 37.7 17 0.00059 26.2 2.2 54 39-98 110-165 (309)
124 3faw_A Reticulocyte binding pr 37.6 65 0.0022 28.1 6.1 58 42-99 302-385 (877)
125 2yb1_A Amidohydrolase; HET: AM 37.1 34 0.0012 25.2 3.8 24 34-57 15-38 (292)
126 4ba0_A Alpha-glucosidase, puta 37.0 30 0.001 29.9 3.9 30 30-59 315-345 (817)
127 1q6o_A Humps, 3-keto-L-gulonat 36.7 41 0.0014 23.5 4.0 41 37-99 68-108 (216)
128 1xla_A D-xylose isomerase; iso 36.6 11 0.00036 29.0 0.9 54 39-97 119-172 (394)
129 1muw_A Xylose isomerase; atomi 36.5 14 0.00049 28.1 1.6 54 39-97 119-172 (386)
130 3ovp_A Ribulose-phosphate 3-ep 36.1 13 0.00046 26.9 1.4 20 36-55 74-93 (228)
131 1thf_D HISF protein; thermophI 35.8 29 0.00098 24.4 3.1 27 36-62 151-177 (253)
132 3tdn_A FLR symmetric alpha-bet 35.8 25 0.00084 25.0 2.7 29 33-61 32-60 (247)
133 3g8r_A Probable spore coat pol 35.6 23 0.00077 27.9 2.7 68 31-99 16-93 (350)
134 2dkj_A Serine hydroxymethyltra 35.5 79 0.0027 22.9 5.5 45 35-99 149-193 (407)
135 3ajx_A 3-hexulose-6-phosphate 35.4 32 0.0011 23.5 3.2 20 36-55 63-83 (207)
136 3fst_A 5,10-methylenetetrahydr 35.2 69 0.0023 24.4 5.3 17 83-99 188-204 (304)
137 3mwd_B ATP-citrate synthase; A 34.9 23 0.00078 27.5 2.6 51 27-98 82-132 (334)
138 3hwu_A Putative DNA-binding pr 34.9 23 0.0008 24.0 2.4 24 77-100 17-40 (147)
139 3civ_A Endo-beta-1,4-mannanase 34.9 73 0.0025 24.3 5.5 52 39-99 56-112 (343)
140 1zy9_A Alpha-galactosidase; TM 34.8 35 0.0012 28.1 3.8 49 39-98 215-264 (564)
141 3md7_A Beta-lactamase-like; ss 34.7 36 0.0012 24.6 3.5 28 33-60 238-265 (293)
142 1aj0_A DHPS, dihydropteroate s 34.6 56 0.0019 24.6 4.7 51 36-100 121-179 (282)
143 3dmy_A Protein FDRA; predicted 34.4 41 0.0014 27.4 4.1 47 30-99 42-88 (480)
144 1ka9_F Imidazole glycerol phos 34.4 29 0.00098 24.4 2.9 27 36-62 152-178 (252)
145 2wc7_A Alpha amylase, catalyti 34.0 24 0.00082 27.6 2.6 58 40-99 60-118 (488)
146 3c8f_A Pyruvate formate-lyase 33.9 38 0.0013 23.0 3.4 61 38-99 180-242 (245)
147 2dt4_A Hypothetical protein PH 33.8 22 0.00074 23.9 2.1 25 76-100 13-37 (143)
148 1h5y_A HISF; histidine biosynt 33.6 31 0.0011 23.8 2.9 28 36-63 154-181 (253)
149 3iv3_A Tagatose 1,6-diphosphat 33.5 19 0.00064 28.2 1.9 47 42-99 116-162 (332)
150 1xpj_A Hypothetical protein; s 33.0 27 0.00091 22.3 2.3 51 38-99 29-79 (126)
151 1uas_A Alpha-galactosidase; TI 32.9 1.2E+02 0.004 23.0 6.3 51 39-99 29-89 (362)
152 3kru_A NADH:flavin oxidoreduct 32.9 38 0.0013 26.1 3.5 52 42-96 149-206 (343)
153 1bqc_A Protein (beta-mannanase 32.7 83 0.0028 22.6 5.2 44 40-98 36-79 (302)
154 2noc_A Putative periplasmic pr 32.7 35 0.0012 22.2 2.8 22 39-60 56-77 (99)
155 2dh2_A 4F2 cell-surface antige 32.6 34 0.0012 26.5 3.3 53 41-99 41-97 (424)
156 1ece_A Endocellulase E1; glyco 32.5 1.2E+02 0.004 22.2 6.1 58 38-98 46-109 (358)
157 2xvl_A Alpha-xylosidase, putat 32.4 39 0.0013 30.2 3.9 28 30-57 483-511 (1020)
158 2hx0_A Putative DNA-binding pr 32.2 23 0.00079 24.2 2.0 24 77-100 23-46 (154)
159 3lpp_A Sucrase-isomaltase; gly 32.1 39 0.0013 29.6 3.8 29 30-58 366-395 (898)
160 3nav_A Tryptophan synthase alp 32.1 65 0.0022 24.1 4.7 41 36-99 112-152 (271)
161 3htn_A Putative DNA binding pr 32.1 21 0.00073 24.3 1.8 24 77-100 20-43 (149)
162 2e8y_A AMYX protein, pullulana 31.8 44 0.0015 27.9 4.0 59 40-99 255-331 (718)
163 4aef_A Neopullulanase (alpha-a 31.8 24 0.00082 28.9 2.3 53 40-99 243-301 (645)
164 1eye_A DHPS 1, dihydropteroate 31.8 78 0.0027 23.8 5.1 56 30-99 106-170 (280)
165 2w6r_A Imidazole glycerol phos 31.7 34 0.0012 24.3 2.9 28 35-62 29-56 (266)
166 1fob_A Beta-1,4-galactanase; B 31.7 57 0.002 24.6 4.3 44 40-98 31-74 (334)
167 2rnn_A E3 SUMO-protein ligase 31.5 25 0.00086 23.7 2.0 17 84-100 40-56 (114)
168 3dcp_A Histidinol-phosphatase; 30.9 42 0.0014 24.9 3.4 24 35-58 17-40 (283)
169 4i6k_A Amidohydrolase family p 30.7 58 0.002 23.5 4.1 27 31-57 47-74 (294)
170 2jna_A Putative secreted prote 30.7 51 0.0017 21.6 3.4 22 39-60 58-79 (104)
171 1qwg_A PSL synthase;, (2R)-pho 30.4 44 0.0015 25.3 3.4 36 34-69 143-182 (251)
172 1rh9_A Endo-beta-mannanase; en 30.4 72 0.0025 23.5 4.6 56 37-98 43-99 (373)
173 3kl7_A Putative metal-dependen 30.2 53 0.0018 23.1 3.7 27 33-61 185-211 (235)
174 2kvu_A MKL/myocardin-like prot 30.1 34 0.0012 21.5 2.3 19 83-101 28-46 (75)
175 2h9a_B CO dehydrogenase/acetyl 29.9 51 0.0017 25.3 3.8 41 37-100 161-201 (310)
176 3o0f_A Putative metal-dependen 29.9 56 0.0019 24.8 4.0 28 30-57 22-49 (301)
177 1vjz_A Endoglucanase; TM1752, 29.9 81 0.0028 23.0 4.8 57 35-98 35-91 (341)
178 3hl2_A O-phosphoseryl-tRNA(SEC 29.8 78 0.0027 26.3 5.1 50 34-99 198-248 (501)
179 1qop_A Tryptophan synthase alp 29.8 77 0.0026 23.0 4.6 39 38-99 111-149 (268)
180 3dtn_A Putative methyltransfer 29.7 43 0.0015 22.6 3.0 34 34-68 190-223 (234)
181 3i6i_A Putative leucoanthocyan 29.6 85 0.0029 22.7 4.8 45 32-97 66-110 (346)
182 3bc9_A AMYB, alpha amylase, ca 29.4 51 0.0017 27.0 3.9 61 39-99 153-224 (599)
183 2qw5_A Xylose isomerase-like T 29.4 25 0.00085 25.7 1.9 16 39-54 112-127 (335)
184 3jx9_A Putative phosphoheptose 29.3 47 0.0016 23.3 3.2 24 38-61 93-117 (170)
185 2xn2_A Alpha-galactosidase; hy 29.2 1.8E+02 0.0062 24.6 7.4 49 39-98 353-410 (732)
186 1sed_A APC1180, hypothetical p 29.2 27 0.00094 23.8 1.9 73 21-99 28-100 (117)
187 3ecd_A Serine hydroxymethyltra 29.1 1.2E+02 0.0041 22.0 5.6 45 35-99 158-202 (425)
188 2ofk_A 3-methyladenine DNA gly 28.7 19 0.00066 26.0 1.1 94 6-99 9-155 (183)
189 2yxb_A Coenzyme B12-dependent 28.5 91 0.0031 21.0 4.6 48 32-99 52-99 (161)
190 2dqw_A Dihydropteroate synthas 28.4 84 0.0029 23.9 4.8 55 30-99 129-192 (294)
191 2cbn_A Ribonuclease Z; phospho 28.2 43 0.0015 23.8 2.9 27 33-61 247-273 (306)
192 2zyj_A Alpha-aminodipate amino 27.8 80 0.0027 23.0 4.4 51 35-99 148-198 (397)
193 3l4n_A Monothiol glutaredoxin- 27.8 39 0.0013 22.2 2.5 27 36-64 1-27 (127)
194 3h9e_O Glyceraldehyde-3-phosph 27.7 36 0.0012 26.8 2.6 30 32-61 101-130 (346)
195 3zwf_A Zinc phosphodiesterase 27.1 59 0.002 24.7 3.7 25 35-61 289-313 (368)
196 1vzw_A Phosphoribosyl isomeras 27.0 48 0.0016 23.2 3.0 26 37-62 147-172 (244)
197 1ccw_A Protein (glutamate muta 26.9 58 0.002 21.3 3.2 23 35-57 40-62 (137)
198 3qja_A IGPS, indole-3-glycerol 26.9 55 0.0019 24.3 3.4 25 34-58 70-94 (272)
199 3isl_A Purine catabolism prote 26.8 1.5E+02 0.0051 21.4 5.7 47 35-99 122-168 (416)
200 1tx2_A DHPS, dihydropteroate s 26.6 1E+02 0.0034 23.5 4.9 57 31-100 142-198 (297)
201 3obe_A Sugar phosphate isomera 26.5 1.6E+02 0.0056 21.1 6.0 21 37-57 37-57 (305)
202 3icg_A Endoglucanase D; cellul 26.3 54 0.0018 26.1 3.4 51 38-98 47-100 (515)
203 2agk_A 1-(5-phosphoribosyl)-5- 26.2 25 0.00084 25.9 1.3 44 35-93 156-200 (260)
204 3piu_A 1-aminocyclopropane-1-c 26.2 90 0.0031 23.2 4.5 48 36-98 173-225 (435)
205 2y88_A Phosphoribosyl isomeras 26.1 48 0.0016 23.1 2.8 26 37-62 150-175 (244)
206 1rpx_A Protein (ribulose-phosp 26.1 55 0.0019 22.8 3.2 21 37-57 79-99 (230)
207 3a5v_A Alpha-galactosidase; be 25.9 1.9E+02 0.0066 22.3 6.5 57 30-99 66-124 (397)
208 3pzg_A Mannan endo-1,4-beta-ma 25.7 72 0.0024 24.9 4.0 57 38-98 45-114 (383)
209 3aie_A Glucosyltransferase-SI; 25.7 94 0.0032 27.1 5.1 61 39-99 636-708 (844)
210 3ir9_A Peptide chain release f 25.5 28 0.00097 24.2 1.5 26 38-63 122-147 (166)
211 1obf_O Glyceraldehyde 3-phosph 25.2 39 0.0014 26.3 2.4 26 33-58 99-124 (335)
212 3kgw_A Alanine-glyoxylate amin 25.1 1.2E+02 0.0041 21.6 4.9 45 35-98 134-179 (393)
213 3pym_A GAPDH 3, glyceraldehyde 25.1 42 0.0014 26.2 2.6 30 32-61 96-125 (332)
214 1h1y_A D-ribulose-5-phosphate 25.0 27 0.00093 24.7 1.4 21 36-56 74-94 (228)
215 2al3_A TUG long isoform; TUG U 25.0 54 0.0018 21.1 2.7 25 76-100 23-47 (90)
216 3tsm_A IGPS, indole-3-glycerol 24.8 72 0.0025 23.9 3.8 22 34-55 77-98 (272)
217 7a3h_A Endoglucanase; hydrolas 24.8 1E+02 0.0036 22.3 4.6 51 36-98 44-94 (303)
218 3ucq_A Amylosucrase; thermosta 24.7 56 0.0019 27.0 3.4 59 39-98 114-175 (655)
219 2ekc_A AQ_1548, tryptophan syn 24.7 70 0.0024 23.2 3.6 38 39-99 112-149 (262)
220 3dzz_A Putative pyridoxal 5'-p 24.7 62 0.0021 23.2 3.3 49 36-99 147-195 (391)
221 1vc4_A Indole-3-glycerol phosp 24.3 73 0.0025 23.3 3.7 21 36-56 65-85 (254)
222 4djd_D C/Fe-SP, corrinoid/iron 24.3 81 0.0028 24.4 4.0 39 39-100 170-208 (323)
223 2e7y_A TRNAse Z; tRNA maturati 24.2 57 0.0019 22.7 2.9 27 33-61 220-246 (280)
224 3ayv_A Putative uncharacterize 24.2 61 0.0021 22.3 3.1 53 39-98 79-131 (254)
225 3doc_A Glyceraldehyde 3-phosph 24.2 37 0.0013 26.6 2.1 30 32-61 98-127 (335)
226 2d59_A Hypothetical protein PH 24.0 1.3E+02 0.0046 19.6 4.7 36 39-99 91-126 (144)
227 2w9m_A Polymerase X; SAXS, DNA 23.8 56 0.0019 26.7 3.2 27 34-60 340-366 (578)
228 3lvf_P GAPDH 1, glyceraldehyde 23.8 45 0.0015 26.2 2.5 29 32-60 98-126 (338)
229 3zrp_A Serine-pyruvate aminotr 23.7 1.1E+02 0.0037 21.7 4.4 46 35-98 113-158 (384)
230 1ceo_A Cellulase CELC; glycosy 23.7 87 0.003 22.8 4.0 53 39-98 31-83 (343)
231 3r8s_O 50S ribosomal protein L 23.7 40 0.0014 22.5 1.9 41 39-99 75-115 (116)
232 1y44_A Ribonuclease Z; zinc-de 23.6 58 0.002 23.4 2.9 25 35-61 247-271 (320)
233 3l8a_A METC, putative aminotra 23.6 80 0.0027 23.4 3.8 49 36-99 181-229 (421)
234 2jg6_A DNA-3-methyladenine gly 23.6 21 0.00071 26.0 0.5 94 6-99 9-155 (186)
235 3e23_A Uncharacterized protein 23.5 89 0.0031 20.7 3.7 28 35-62 158-186 (211)
236 3s1x_A Probable transaldolase; 23.5 51 0.0017 24.3 2.6 50 35-100 112-161 (223)
237 3pzs_A PM kinase, pyridoxamine 23.4 81 0.0028 22.8 3.7 26 38-63 166-191 (289)
238 3v1y_O PP38, glyceraldehyde-3- 23.4 39 0.0013 26.5 2.1 30 31-60 99-128 (337)
239 3b0x_A DNA polymerase beta fam 23.1 64 0.0022 26.3 3.4 24 34-57 350-373 (575)
240 2b4r_O Glyceraldehyde-3-phosph 23.1 40 0.0014 26.4 2.1 27 33-59 107-133 (345)
241 3cny_A Inositol catabolism pro 23.0 69 0.0024 22.4 3.2 58 39-98 93-155 (301)
242 1d2f_A MALY protein; aminotran 23.0 1.4E+02 0.0047 21.6 5.0 17 83-99 181-197 (390)
243 3qc0_A Sugar isomerase; TIM ba 23.0 59 0.002 22.4 2.8 53 39-99 86-138 (275)
244 3n0l_A Serine hydroxymethyltra 22.9 1.7E+02 0.0057 21.2 5.4 45 35-99 150-194 (417)
245 2wan_A Pullulanase; hydrolase, 22.7 50 0.0017 28.7 2.8 58 41-99 474-547 (921)
246 3r8r_A Transaldolase; pentose 22.7 41 0.0014 24.6 2.0 50 35-100 110-159 (212)
247 3g1p_A Protein PHNP; C-P lyase 22.6 73 0.0025 22.3 3.3 26 32-57 197-222 (258)
248 2ji4_A Phosphoribosyl pyrophos 22.6 50 0.0017 25.8 2.6 43 19-61 118-160 (379)
249 1geq_A Tryptophan synthase alp 22.5 48 0.0016 23.3 2.3 18 39-56 98-115 (248)
250 2cxh_A Probable BRIX-domain ri 22.4 2.3E+02 0.0077 20.6 6.0 52 3-60 41-94 (217)
251 3g2m_A PCZA361.24; SAM-depende 22.4 73 0.0025 22.6 3.3 24 35-58 251-274 (299)
252 2oqx_A Tryptophanase; lyase, p 22.3 1.5E+02 0.0052 22.0 5.2 50 36-99 167-219 (467)
253 4a3u_A NCR, NADH\:flavin oxido 22.2 56 0.0019 25.0 2.7 52 42-96 158-215 (358)
254 1hjs_A Beta-1,4-galactanase; 4 22.0 1.4E+02 0.0047 22.5 4.9 44 40-98 31-74 (332)
255 2ez2_A Beta-tyrosinase, tyrosi 21.9 1.3E+02 0.0045 22.3 4.7 51 35-99 157-210 (456)
256 2x7v_A Probable endonuclease 4 21.8 61 0.0021 22.5 2.7 17 39-55 92-108 (287)
257 2zvr_A Uncharacterized protein 21.7 1.2E+02 0.0041 21.3 4.3 43 36-99 41-83 (290)
258 3q58_A N-acetylmannosamine-6-p 21.7 1.3E+02 0.0044 21.6 4.5 39 41-99 93-131 (229)
259 2lnh_A N-WAsp, neural wiskott- 21.6 21 0.00071 21.7 0.1 14 38-51 24-37 (65)
260 3fky_A Glutamine synthetase; b 21.6 59 0.002 25.3 2.8 19 82-100 169-187 (370)
261 1h67_A Calponin alpha; cytoske 21.4 42 0.0014 21.5 1.6 19 82-100 58-76 (108)
262 3bxo_A N,N-dimethyltransferase 21.1 57 0.002 21.9 2.3 17 35-51 204-220 (239)
263 3igs_A N-acetylmannosamine-6-p 21.1 1.3E+02 0.0045 21.5 4.5 39 41-99 93-131 (232)
264 1y8c_A S-adenosylmethionine-de 21.0 70 0.0024 21.4 2.8 23 34-56 201-223 (246)
265 4dib_A GAPDH, glyceraldehyde 3 21.0 45 0.0015 26.3 2.0 30 31-60 97-126 (345)
266 3qy7_A Tyrosine-protein phosph 20.9 63 0.0022 23.7 2.7 27 35-61 16-45 (262)
267 3kki_A CAI-1 autoinducer synth 20.9 2E+02 0.0069 20.9 5.5 45 36-98 173-217 (409)
268 3ayr_A Endoglucanase; TIM barr 20.8 91 0.0031 23.4 3.6 52 38-98 64-117 (376)
269 4e77_A Glutamate-1-semialdehyd 20.7 2.6E+02 0.0088 20.6 6.3 51 37-99 186-236 (429)
270 1ax4_A Tryptophanase; tryptoph 20.7 1.2E+02 0.0043 22.5 4.4 51 35-99 166-219 (467)
271 3nra_A Aspartate aminotransfer 20.7 1.8E+02 0.006 21.0 5.1 17 83-99 198-214 (407)
272 1x7f_A Outer surface protein; 20.6 97 0.0033 24.7 3.9 44 40-98 45-88 (385)
273 1gqi_A Alpha-glucuronidase; (a 20.6 74 0.0025 27.6 3.3 48 38-99 186-234 (708)
274 1uas_A Alpha-galactosidase; TI 20.6 1.1E+02 0.0039 23.1 4.2 27 30-56 66-94 (362)
275 3jr2_A Hexulose-6-phosphate sy 20.6 77 0.0026 22.1 3.0 19 37-55 71-89 (218)
276 2d3a_A Glutamine synthetase; l 20.5 66 0.0023 24.9 2.8 19 82-100 168-186 (356)
277 2d73_A Alpha-glucosidase SUSB; 20.5 2.7E+02 0.0091 24.2 6.8 73 24-98 357-432 (738)
278 3ids_C GAPDH, glyceraldehyde-3 20.3 47 0.0016 26.3 1.9 29 31-59 109-137 (359)
279 1me8_A Inosine-5'-monophosphat 20.1 98 0.0033 24.7 3.9 50 40-96 296-345 (503)
280 2gzx_A Putative TATD related D 20.1 99 0.0034 21.2 3.5 21 37-57 17-37 (265)
No 1
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=100.00 E-value=1.1e-38 Score=260.88 Aligned_cols=94 Identities=40% Similarity=0.717 Sum_probs=90.7
Q ss_pred CCChHHHHHHHHhCCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCc
Q psy1381 5 NPNSTVTKFMERNYKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRD 84 (102)
Q Consensus 5 ~~~~~y~~~~~~~~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rD 84 (102)
.+.+++.+||.++||++++|++|+++|+|++|||++||+++|+|||||+|||||||||||||||+++ +||+++.+|+||
T Consensus 74 ~~~~~~~~~~~~~yg~~~~Y~d~~~~F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t-~~ns~~~~pkrD 152 (455)
T 2zxd_A 74 IKESPTWEYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYT-DFNSVKRGPKRD 152 (455)
T ss_dssp STTSHHHHHHHHHTCTTCCGGGHHHHCCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSC-SCBTTTSTTCSC
T ss_pred CCCChHHHHHHhhcCCCccHHHHHhhCCcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCC-CCcccccCCCCC
Confidence 4577899999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred hHHHHHHHHhhcCCC
Q psy1381 85 LVDYTFGNWFTGGSP 99 (102)
Q Consensus 85 iv~el~~a~~~~Gl~ 99 (102)
||+||++|||++||.
T Consensus 153 lv~El~~A~rk~Glk 167 (455)
T 2zxd_A 153 LVGDLAKAVREAGLR 167 (455)
T ss_dssp HHHHHHHHHHHTTCE
T ss_pred hHHHHHHHHHHcCCe
Confidence 999999999999984
No 2
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=100.00 E-value=1e-35 Score=242.63 Aligned_cols=89 Identities=29% Similarity=0.588 Sum_probs=82.1
Q ss_pred HHHHHHHh-CCCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHH
Q psy1381 10 VTKFMERN-YKPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDY 88 (102)
Q Consensus 10 y~~~~~~~-~~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~e 88 (102)
|.||...+ .++.++|++++++|+|++|||++||+++|+|||||+|||||||||||||||+++ +||+++.+++||||+|
T Consensus 51 ~~EW~~~~~~~~~~~Y~~~~~~F~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t-~~n~~~~~~krDlv~e 129 (450)
T 2wvv_A 51 AAEWLKSWAKVPADEWLKLMDQWNPTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYT-KYTVANTPYKRDILGE 129 (450)
T ss_dssp CGGGHHHHTTCCHHHHHGGGGGCCCTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTC-SCBGGGSTTCSCHHHH
T ss_pred cchHhhccCCCChhhhHHHHhhCCcccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCC-CCccccCCCCCChHHH
Confidence 44666544 467889999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHhhcCCC
Q psy1381 89 TFGNWFTGGSP 99 (102)
Q Consensus 89 l~~a~~~~Gl~ 99 (102)
|++|||++||.
T Consensus 130 l~~A~rk~Glk 140 (450)
T 2wvv_A 130 LVKAYNDEGID 140 (450)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHHcCCe
Confidence 99999999984
No 3
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.1e-31 Score=220.34 Aligned_cols=76 Identities=26% Similarity=0.458 Sum_probs=69.2
Q ss_pred ChHHh-hccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccC---CCCCchHHHHHHHHhhcCC
Q psy1381 23 TYQDF-AKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDI---GPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 23 ~Y~~~-a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~---~p~rDiv~el~~a~~~~Gl 98 (102)
+|.+. ++.|+|++|||++||+++|+|||||+|||+|||||||||||+++ +||+++. +|+||||+||++|||++||
T Consensus 40 g~~~~~~~~F~p~~fd~~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t-~~~~~~~p~~~~k~Div~e~~~A~r~~Gl 118 (469)
T 3eyp_A 40 GDGKASTAIFNPTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYT-DYSVKNAAWKNGKGDVVREFVDACEEYGL 118 (469)
T ss_dssp CCSCSCGGGCCCSSCCHHHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTC-SSBGGGSSGGGGTCCHHHHHHHHHHHHTC
T ss_pred CCCCcChhhCCcccCCHHHHHHHHHHcCCCEEEEEEEeCCCccccCCCCC-CcccccCcccCCCCCHHHHHHHHHHHcCC
Confidence 55554 67999999999999999999999999999999999999999999 6888764 4689999999999999998
Q ss_pred C
Q psy1381 99 P 99 (102)
Q Consensus 99 ~ 99 (102)
.
T Consensus 119 ~ 119 (469)
T 3eyp_A 119 K 119 (469)
T ss_dssp E
T ss_pred e
Confidence 4
No 4
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=99.96 E-value=2.1e-30 Score=213.42 Aligned_cols=78 Identities=29% Similarity=0.487 Sum_probs=67.6
Q ss_pred CCCChH-HhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC----CCchHHHHHHHHh
Q psy1381 20 PGFTYQ-DFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP----KRDLVDYTFGNWF 94 (102)
Q Consensus 20 ~~~~Y~-~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p----~rDiv~el~~a~~ 94 (102)
.++.+. +.++.|+|++|||++||+++|+|||||+|||+|||||||||||+++ +|++ ..+| +||||+||++|||
T Consensus 45 ~eW~~g~~~~~~F~p~~fd~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t-~~~v-~~~p~~~~krDiv~el~~A~r 122 (478)
T 3ues_A 45 REWGLGHEDPALFNPRNVDVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLT-RHTV-ASSPWREGKGDLVREVSESAR 122 (478)
T ss_dssp CSSCCSCCCGGGCCCSSCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTC-SCBG-GGSSGGGGTCCHHHHHHHHHH
T ss_pred ccccCCCCChhhCCcccCCHHHHHHHHHHcCCCEEEEeEEecCCccccCCCCC-Cccc-ccCCccCCCCCHHHHHHHHHH
Confidence 344443 3578999999999999999999999999999999999999999999 5654 4444 6999999999999
Q ss_pred hcCCC
Q psy1381 95 TGGSP 99 (102)
Q Consensus 95 ~~Gl~ 99 (102)
++||.
T Consensus 123 ~~gl~ 127 (478)
T 3ues_A 123 RHGLK 127 (478)
T ss_dssp HTTCE
T ss_pred HcCCe
Confidence 99984
No 5
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.96 E-value=6.9e-30 Score=208.94 Aligned_cols=70 Identities=23% Similarity=0.416 Sum_probs=65.1
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCccccc---CCCCCchHHHHHHHHhhcCCC
Q psy1381 29 KDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMD---IGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 29 ~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~---~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+.|+|++|||++||+++++|||||+|||+|||||||||||+++ +||++. .+|+||||+||++|||++||.
T Consensus 52 ~~f~~~~fd~~~w~~~~k~aGaky~v~t~kHHdGf~lw~s~~t-~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~ 124 (443)
T 3gza_A 52 NIFNPTELNTDQWVQAAKAAGCKFAVLTATHETGFGLWQSDVN-PYCLKAVKWRDGKGDIVRDFVNSCRKYGLQ 124 (443)
T ss_dssp GGCCCTTCCHHHHHHHHHTTTCSEEEEESCCSSCCBSSCCSSC-SSBGGGSSGGGGTCCHHHHHHHHHHHHTCE
T ss_pred hcCChhhCCHHHHHHHHHHcCCCEEEEeeEeCCCcccCCCCCC-CcccccCCccCCCcCHHHHHHHHHHHcCCe
Confidence 5899999999999999999999999999999999999999999 687654 467899999999999999984
No 6
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=8.1e-18 Score=133.87 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=60.8
Q ss_pred hccCCCCCCCHHHHHHH---HHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 28 AKDFTAEFFDANHWADI---LASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 28 a~~F~p~~fDp~~Wa~l---~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
......++|||++|.++ +|++||+|||||++||+|||+|||+++. +.....|++|||++++++|+++||.
T Consensus 43 ~~d~~~qnWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~--~~~~~~p~~Dlv~~~l~aa~k~Gmk 115 (340)
T 4h41_A 43 SHDIPHQNWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLL--KKGCYMPSVDLVDMYLRLAEKYNMK 115 (340)
T ss_dssp CSSSCCCCCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHH--HTTCCCCSBCHHHHHHHHHHHTTCE
T ss_pred cCCCcccCCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCccccc--ccCccCCcccHHHHHHHHHHHhCCe
Confidence 44667789999999655 5799999999999999999999999872 3555678999999999999999984
No 7
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=79.48 E-value=1 Score=37.26 Aligned_cols=58 Identities=16% Similarity=0.323 Sum_probs=37.4
Q ss_pred cCCCCCCCHHHH---HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHW---ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~W---a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.|+|+.|+++.| ++++|++|++.|-+-. |+ |..-.. ..+ ...|.+.++++.|+++||-
T Consensus 5 ~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~i-----f~-W~~~eP------~~g~~d~~~ld~~ld~a~~~Gi~ 66 (645)
T 1kwg_A 5 CYYPEHWPKERWKEDARRMREAGLSHVRIGE-----FA-WALLEP------EPGRLEWGWLDEAIATLAAEGLK 66 (645)
T ss_dssp ECCGGGSCHHHHHHHHHHHHHHTCCEEEECT-----TC-HHHHCS------BTTBCCCHHHHHHHHHHHTTTCE
T ss_pred cCCcccCCHHHHHHHHHHHHHcCCCEEEEee-----ec-hhhcCC------CCCccChHHHHHHHHHHHHCCCE
Confidence 456666666666 6789999999998731 11 321000 000 1357899999999999983
No 8
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=77.45 E-value=5.4 Score=28.63 Aligned_cols=50 Identities=2% Similarity=-0.083 Sum_probs=36.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+-..+|++-+++++++++|.+|++ |.+.|.+|+. ...+|.+.+++.|++
T Consensus 201 ~~~hm~~~ea~~~~~~l~~~~vi~~--H~~~~~~~~~----------------~~~~l~~~~~~~g~~ 250 (264)
T 3rpc_A 201 DSIIMGTKDIGRMVVRKPEAKIIAV--HMDTVNHTAT----------------SRKDVRKFIKGNNIE 250 (264)
T ss_dssp SCSSCCHHHHHHHHHHCTTSEEEEE--SCSSSTTBCS----------------CHHHHHHHHHHTTCT
T ss_pred CCcccCHHHHHHHHHhCCcCeEEEE--cccccccccc----------------CHHHHHHHHHHcCCC
Confidence 4568899999999999999987776 7776664321 135667777777774
No 9
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=77.14 E-value=1.6 Score=31.24 Aligned_cols=55 Identities=5% Similarity=-0.103 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+++++++++.|++++++ |.|+..++...... .....--.+.++++.+.++++||.
T Consensus 107 ~~~i~~a~~lGa~~v~~----~~g~~~~~~~~p~~--~~~~~~~~~~l~~l~~~a~~~Gv~ 161 (287)
T 3kws_A 107 KEIIAAAGELGSTGVII----VPAFNGQVPALPHT--METRDFLCEQFNEMGTFAAQHGTS 161 (287)
T ss_dssp HHHHHHHHHTTCSEEEE----CSCCTTCCSBCCSS--HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCEEEE----ecCcCCcCCCCCCH--HHHHHHHHHHHHHHHHHHHHcCCE
Confidence 46889999999999988 34554442111000 000000257788889999999874
No 10
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=74.95 E-value=4.6 Score=28.51 Aligned_cols=17 Identities=12% Similarity=-0.091 Sum_probs=13.5
Q ss_pred CchHHHHHHHHhhcCCC
Q psy1381 83 RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl~ 99 (102)
.+.++++.+.++++|+.
T Consensus 112 ~~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 112 YELLPYVDKKVKEYDFH 128 (257)
T ss_dssp GGGHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCE
Confidence 46788888888888873
No 11
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=74.37 E-value=5.5 Score=27.85 Aligned_cols=57 Identities=12% Similarity=-0.037 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCc--ccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGY--TLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF--~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl 98 (102)
+++++++|++|++-|=+-. |.+|. ..|+..... ...... ..-+-+.++++.|.++||
T Consensus 45 ~~~l~~~k~~G~N~vRv~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~a~~~Gi 104 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWI-HIQGETTPAFNDQGFV--TGPDKQGTMLDDMKDLLDTAKKYNI 104 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EETTSSSSEECTTSCE--EESCSSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCcEEEECc-ccccccCccccccccc--ccccccHHHHHHHHHHHHHHHHCCC
Confidence 6779999999999874422 22221 122222210 011111 124567899999999997
No 12
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=71.43 E-value=5.8 Score=33.30 Aligned_cols=59 Identities=8% Similarity=0.101 Sum_probs=39.8
Q ss_pred cCCCCCCCHHHH---HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHW---ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~W---a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.++|+.++++.| ++++|++|++.+-+-.=.- -.+.|++-. | ..+.+.++++.|+++||-
T Consensus 14 ~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W--~~~eP~~g~--~-------~f~~ld~~i~~~~~~Gi~ 75 (675)
T 3tty_A 14 DYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSW--AKIQRDEVS--Y-------DFTWLDDIIERLTKENIY 75 (675)
T ss_dssp ECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCH--HHHBSSSSC--B-------CCHHHHHHHHHHHHTTCE
T ss_pred eCChhhCCHHHHHHHHHHHHHcCCCEEEEeeech--hhhCCcCCc--c-------CHHHHHHHHHHHHHCCCE
Confidence 568888998777 6689999999888621000 011222211 1 357899999999999983
No 13
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=70.85 E-value=2.1 Score=30.83 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|++++++. |+..|..... . ....--.+.++++.+.++++|+
T Consensus 111 ~~~i~~A~~lG~~~v~~~-----~~~~~~~~~~-~---~~~~~~~~~l~~l~~~a~~~Gv 161 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLA-----GYDVYYQEAN-N---ETRRRFRDGLKESVEMASRAQV 161 (295)
T ss_dssp HHHHHHHHHHTCCEEEEC-----CCSCSSSCCC-H---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEC-----CCCCCcCcCH-H---HHHHHHHHHHHHHHHHHHHhCC
Confidence 578899999999999872 4443321111 0 0000014677888888888887
No 14
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=68.82 E-value=7.2 Score=30.22 Aligned_cols=58 Identities=9% Similarity=-0.065 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCeEEEeeeec------CCcccCCCCCCCCcccccC-CCCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHH------EGYTLWPSKYAFSWNSMDI-GPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHH------dGF~lW~S~~~~~~~s~~~-~p~rDiv~el~~a~~~~Gl 98 (102)
+.++-++++|+..|-|+-=.- .|-.-|.-... +|..++. -...+=+++|+++|+++||
T Consensus 34 ~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~-dy~~i~~~~Gt~~~~~~lv~~~h~~Gi 98 (449)
T 3dhu_A 34 ADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIK-DYRGINPEYGTLADFKALTDRAHELGM 98 (449)
T ss_dssp TTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBS-CTTSCCGGGCCHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCC
Confidence 346789999999999985332 12111111111 2212221 1146778999999999998
No 15
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=67.96 E-value=8.7 Score=26.96 Aligned_cols=16 Identities=6% Similarity=-0.488 Sum_probs=11.8
Q ss_pred CchHHHHHHHHhhcCC
Q psy1381 83 RDLVDYTFGNWFTGGS 98 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl 98 (102)
.+.++++.+.++++|+
T Consensus 114 ~~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 114 LSDWDLVEKLSKQYNI 129 (262)
T ss_dssp GGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 3556788888888876
No 16
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=67.37 E-value=7.5 Score=30.35 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=34.4
Q ss_pred HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
++-+|+.|+..|-|+-=+-..-.-|--.++ +|..++..- ..+=+++|+++|+++||
T Consensus 38 LdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~-dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi 94 (549)
T 4aie_A 38 LDYLEKLGIDAIWLSPVYQSPGVDNGYDIS-DYEAIDPQYGTMADMDELISKAKEHHI 94 (549)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCS-EEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHCCCCEEEeCCCcCCCCCCCCcCcc-CCCCcCcccCCHHHHHHHHHHHHHCCC
Confidence 567899999999998644321111111112 233333221 34568999999999998
No 17
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=65.85 E-value=16 Score=31.01 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+..++.|++.|..||++ | .-|++....++ ...-|..| ++||++-+++.||
T Consensus 312 k~yIDfAa~~G~~yvlv-----D--~gW~~~~~~d~--~~~~p~~d-i~~l~~Ya~~kgV 361 (641)
T 3a24_A 312 KAYIDFASANGIEYVIL-----D--EGWAVNLQADL--MQVVKEID-LKELVDYAASKNV 361 (641)
T ss_dssp HHHHHHHHHTTCCEEEE-----C--TTSBCTTSCCT--TCBCTTCC-HHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEE-----e--cccccCCCCCc--cccCCcCC-HHHHHHHHHhcCC
Confidence 78999999999999999 4 45654222111 12223344 6899999999987
No 18
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=65.44 E-value=13 Score=26.84 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccc-----cC--CCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSM-----DI--GPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~-----~~--~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|++++++ |-|...|+.... |... .. .--.+.++++++.++++||
T Consensus 114 ~~~i~~A~~lGa~~v~~----~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 174 (340)
T 2zds_A 114 KDTARAAARLGVDTVIG----FTGSAIWHLVAM--FPPAPESMIERGYQDFADRWNPILDVFDAEGV 174 (340)
T ss_dssp HHHHHHHHHHTCSEEEE----CCCCSSGGGTTC--CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEE----ecCCcCcccccc--cCCCcccchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56789999999999998 345554443221 1000 00 0013677888888888887
No 19
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=65.12 E-value=14 Score=25.97 Aligned_cols=14 Identities=7% Similarity=-0.282 Sum_probs=11.4
Q ss_pred hHHHHHHHHhhcCC
Q psy1381 85 LVDYTFGNWFTGGS 98 (102)
Q Consensus 85 iv~el~~a~~~~Gl 98 (102)
.++++++.++++|+
T Consensus 113 ~l~~l~~~a~~~Gv 126 (264)
T 1yx1_A 113 DLAALGRRLARHGL 126 (264)
T ss_dssp CHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHhcCC
Confidence 67888888888886
No 20
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=64.44 E-value=10 Score=29.36 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=35.8
Q ss_pred HHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
-++-+++.|+..|-|+-=+..+ .-|.-..+ +|..++..- ..+=+++|+++|+++||
T Consensus 28 ~LdyL~~LGv~~I~L~Pi~~~~-~~~GY~~~-dy~~idp~~Gt~~df~~lv~~aH~~Gi 84 (441)
T 1lwj_A 28 AVSYLKELGIDFVWLMPVFSSI-SFHGYDVV-DFYSFKAEYGSEREFKEMIEAFHDSGI 84 (441)
T ss_dssp THHHHHHTTCCEEEECCCEECS-SSSCCSCS-EEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHcCCCEEEeCCCcCCC-CCCCCCcc-cccccCcccCCHHHHHHHHHHHHHCCC
Confidence 4678899999999988655432 01111222 232333221 36779999999999998
No 21
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=64.37 E-value=13 Score=28.58 Aligned_cols=56 Identities=16% Similarity=0.057 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCccccc-CCC-CCchHHHHHHHHhhcCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMD-IGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~-~~p-~rDiv~el~~a~~~~Gl 98 (102)
-++-++++|+..|-|+-=+... .-|.-... +|..++ ..- ..+-+++|+++|+++||
T Consensus 26 ~ldyl~~lGv~~i~l~Pi~~~~-~~~gY~~~-d~~~id~~~~Gt~~d~~~lv~~~h~~Gi 83 (405)
T 1ht6_A 26 KVDDIAAAGVTHVWLPPPSHSV-SNEGYMPG-RLYDIDASKYGNAAELKSLIGALHGKGV 83 (405)
T ss_dssp THHHHHHTTCCEEEECCCSCBS-STTSSSBC-CTTCGGGCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEeCCCccCC-CCCCCCcc-ccccCCCccCCCHHHHHHHHHHHHHCCC
Confidence 3677899999999987543321 01111111 222333 221 46789999999999998
No 22
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=64.12 E-value=2.7 Score=29.95 Aligned_cols=51 Identities=6% Similarity=-0.090 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+++++++++.|++++++. -| .+...+.. ....--.+.++++++.++++|+.
T Consensus 96 ~~~i~~A~~lGa~~v~~~----~g---~~~~~~~~---~~~~~~~~~l~~l~~~a~~~Gv~ 146 (269)
T 3ngf_A 96 DIALHYALALDCRTLHAM----SG---ITEGLDRK---ACEETFIENFRYAADKLAPHGIT 146 (269)
T ss_dssp HHHHHHHHHTTCCEEECC----BC---BCTTSCHH---HHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHcCCCEEEEc----cC---CCCCCCHH---HHHHHHHHHHHHHHHHHHHcCCE
Confidence 678999999999999873 34 12211100 00001257788888889998873
No 23
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=63.92 E-value=5.6 Score=27.86 Aligned_cols=46 Identities=9% Similarity=-0.121 Sum_probs=28.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCC-CchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPK-RDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~-rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|++++++ |.|+. .. . .|. -- .+.++++.+.++++|+
T Consensus 88 ~~~i~~a~~lG~~~v~~----~~g~~---~~-~-~~~-----~~~~~~l~~l~~~a~~~gv 134 (272)
T 2q02_A 88 EGLLRDAQGVGARALVL----CPLND---GT-I-VPP-----EVTVEAIKRLSDLFARYDI 134 (272)
T ss_dssp HHHHHHHHHHTCSEEEE----CCCCS---SB-C-CCH-----HHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhCCCEEEE----ccCCC---ch-h-HHH-----HHHHHHHHHHHHHHHHcCC
Confidence 56788888888888887 23321 00 0 110 01 5667888888888886
No 24
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=63.82 E-value=9.1 Score=30.80 Aligned_cols=59 Identities=10% Similarity=-0.020 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|+..|-|+-=+-....-|--.++ +|..++..- ..+=+++|+++|+++||-
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~-dy~~idp~~Gt~~df~~Lv~~aH~~Gi~ 95 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDIS-DYREVMKEYGTMEDFDRLMAELKKRGMR 95 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCS-EEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 44578999999999988554432211211222 233333222 357789999999999983
No 25
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=63.67 E-value=3.4 Score=29.54 Aligned_cols=55 Identities=7% Similarity=-0.162 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcc-cCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYT-LWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~-lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++++++++.|++++++.. |.|+. -++...+. .....--.+.++++.+.++++|+.
T Consensus 92 ~~i~~a~~lG~~~v~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~a~~~Gv~ 147 (294)
T 3vni_A 92 DLLKRLYKLDVHLIGGAL--YSYWPIDYTKTIDK---KGDWERSVESVREVAKVAEACGVD 147 (294)
T ss_dssp HHHHHHHHHTCCEEEEST--TSCSSCCTTSCCCH---HHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCeeeccc--cCCCCCcCCCCCCH---HHHHHHHHHHHHHHHHHHHHcCCE
Confidence 479999999999997522 44442 12211110 000000247788888888888873
No 26
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=62.88 E-value=13 Score=30.19 Aligned_cols=57 Identities=16% Similarity=0.092 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
+-++-++++|+..|-|+-=.... .-|--..+ +|..++..- ..+=+++|+++|+++||
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~-~~~GYd~~-dy~~idp~~Gt~~df~~lv~~~H~~Gi 233 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKAT-TNHKYDTE-DYFQIDPQFGDKDTLKKLVDLCHERGI 233 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCS-SSSTTSCS-CTTCCCTTTCCHHHHHHHHHHHTTTTC
T ss_pred HhhHHHHHcCCCEEEECCCccCC-CCCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCC
Confidence 44688999999999998433211 11222222 233333221 35778999999999998
No 27
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=62.14 E-value=11 Score=29.86 Aligned_cols=51 Identities=10% Similarity=-0.065 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+.+.++.++++|+.++.+-+- ...++ .+ + ..+++.+=+++|.+.|++.|||
T Consensus 158 a~~~a~~~k~aGa~~vk~q~f--------kprts-~~-~-f~gl~~egl~~L~~~~~~~Gl~ 208 (385)
T 3nvt_A 158 VAAVAESIKAKGLKLIRGGAF--------KPRTS-PY-D-FQGLGLEGLKILKRVSDEYGLG 208 (385)
T ss_dssp HHHHHHHHHHTTCCEEECBSS--------CCCSS-TT-S-CCCCTHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCCeEEcccc--------cCCCC-hH-h-hcCCCHHHHHHHHHHHHHcCCE
Confidence 367788999999998887652 22333 11 1 2255567789999999999997
No 28
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=61.94 E-value=9.1 Score=29.74 Aligned_cols=55 Identities=11% Similarity=-0.032 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcc-----cCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYT-----LWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~-----lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
++-++++|++|++.|=+- ++||.+ +|+.-.... ..... ..+.+..+++.|+++||
T Consensus 65 ~~dl~~~k~~G~N~vR~~--~~d~~~~~~~~~~~~~~~~~---g~~~e~~~~~lD~~l~~a~~~Gi 125 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVL--AVSEKSEINSAVKPAVTNGF---GNYDETLLQGLDYLLVELAKRDM 125 (440)
T ss_dssp HHHHHHHHHTTCCEEEEE--CCCBCCCSTTSCSSCSBSST---TCBCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEC--cccCCCCCcccccccccCCC---CccCHHHHHHHHHHHHHHHHCCC
Confidence 455788999999998776 666643 344211100 00000 24667799999999998
No 29
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=61.53 E-value=8 Score=31.09 Aligned_cols=59 Identities=12% Similarity=-0.046 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|+..|-|+-=+..+..-|.-.++ +|..++.. ...+=+++|+++|+++||-
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~-dy~~idp~~Gt~~df~~lv~~~h~~Gi~ 94 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIA-NYEAIADIFGNMADMDNLLTQAKMRGIK 94 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCS-EEEEECGGGCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 44578899999999998655432211211222 23233221 1357789999999999983
No 30
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=58.98 E-value=12 Score=30.44 Aligned_cols=59 Identities=7% Similarity=-0.110 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|+..|-|+-=+.....-|.-.++ +|..++..- ..+=+++|+++|+++||-
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~-dy~~id~~~Gt~~df~~lv~~~h~~Gi~ 103 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFYDSPQDDMGYDIA-NYEKVWPTYGTNEDCFALIEKTHKLGMK 103 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCS-EEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCcCcc-cccccccccCCHHHHHHHHHHHHHCCCE
Confidence 34568899999999987544322111111122 232333221 357789999999999983
No 31
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=58.79 E-value=9.5 Score=30.85 Aligned_cols=58 Identities=10% Similarity=-0.029 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl 98 (102)
+-++-++++|+..|-|+-=+-....-|.-.++ +|..++.. ...+=+++|+++|+++||
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~-dy~~idp~~Gt~~df~~lv~~aH~~Gi 107 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDIS-NYRQIMKEYGTMEDFDSLVAEMKKRNM 107 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCS-EEEEECGGGCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcc-cccccCcccCCHHHHHHHHHHHHHCCC
Confidence 45678999999999998544432211111222 23223221 135778999999999998
No 32
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=58.61 E-value=7.8 Score=28.59 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHcCCCeEEEe
Q psy1381 36 FDANHWADILASSGAKYVVLT 56 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlT 56 (102)
-||+.|++.+.++||.++.+-
T Consensus 79 ~~p~~~i~~~~~aGAd~itvH 99 (237)
T 3cu2_A 79 RNQLEVAKAVVANGANLVTLQ 99 (237)
T ss_dssp SCHHHHHHHHHHTTCSEEEEE
T ss_pred ECHHHHHHHHHHcCCCEEEEe
Confidence 499999999999999997663
No 33
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=58.53 E-value=13 Score=30.16 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|...|-|+-=+...+ -|--..+ +|..++..- ..+=+++|+++|+++||-
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~-~~GYd~~-dy~~idp~~Gt~~df~~lv~~~H~~Gi~ 238 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPS-NHKYDTA-DYFEVDPHFGDKETLKTLIDRCHEKGIR 238 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSS-SSCCSCS-EEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEECCcccCCC-CCCcCcc-ccCccCccCCCHHHHHHHHHHHHHCCCE
Confidence 446889999999999885433211 1222222 232333222 357789999999999983
No 34
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=58.38 E-value=9.4 Score=30.72 Aligned_cols=59 Identities=12% Similarity=-0.023 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-++++|+..|-|+-=+..+..-+.-.++ +|..++.. ...+=+++|+++|+++||-
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~-dy~~id~~~Gt~~d~~~lv~~~h~~Gi~ 94 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDIS-DYYAIMDEFGTMDDFDELLAQAHRRGLK 94 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCS-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 45678999999999987544422111111112 22222221 1357789999999999983
No 35
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=58.29 E-value=9 Score=28.39 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=27.5
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+-+++++ ++.+.++||+++|. |. +-.+++++|+++|+|
T Consensus 92 TVlt~~~-a~~Ai~AGA~fIvs-------------------------P~--~~~~vi~~~~~~gi~ 129 (232)
T 4e38_A 92 TILNGEQ-ALAAKEAGATFVVS-------------------------PG--FNPNTVRACQEIGID 129 (232)
T ss_dssp CCCSHHH-HHHHHHHTCSEEEC-------------------------SS--CCHHHHHHHHHHTCE
T ss_pred CcCCHHH-HHHHHHcCCCEEEe-------------------------CC--CCHHHHHHHHHcCCC
Confidence 4578777 56788999999972 11 235788889998886
No 36
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=58.00 E-value=3.6 Score=30.20 Aligned_cols=20 Identities=25% Similarity=0.516 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCCeEEEe
Q psy1381 37 DANHWADILASSGAKYVVLT 56 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlT 56 (102)
||+.|++.+.++||.++++-
T Consensus 68 dp~~~i~~~~~aGAd~itvh 87 (231)
T 3ctl_A 68 RPQDYIAQLARAGADFITLH 87 (231)
T ss_dssp CGGGTHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEC
Confidence 78999999999999999763
No 37
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=57.86 E-value=16 Score=25.66 Aligned_cols=48 Identities=13% Similarity=0.137 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+++++.++.++++|+++|=+...| ++... ..+-+.++.+.++++||.
T Consensus 29 ~~~~~~~l~~~~~~G~~~vEl~~~~------~~~~~-----------~~~~~~~~~~~l~~~gl~ 76 (257)
T 3lmz_A 29 NFDLDTTLKTLERLDIHYLCIKDFH------LPLNS-----------TDEQIRAFHDKCAAHKVT 76 (257)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTT------SCTTC-----------CHHHHHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHhCCCEEEEeccc------CCCCC-----------CHHHHHHHHHHHHHcCCe
Confidence 4689999999999999999887663 11111 123467778888888874
No 38
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=57.63 E-value=17 Score=27.46 Aligned_cols=50 Identities=14% Similarity=-0.013 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++.++++|++.+.+-+-. ..++. + + ..+++.+=+++|.+.|++.|||
T Consensus 55 ~~~a~~~k~~ga~~~k~~~~k--------prts~-~-~-f~g~g~~gl~~l~~~~~~~Gl~ 104 (276)
T 1vs1_A 55 REAALAVKEAGAHMLRGGAFK--------PRTSP-Y-S-FQGLGLEGLKLLRRAGDEAGLP 104 (276)
T ss_dssp HHHHHHHHHHTCSEEECBSSC--------CCSST-T-S-CCCCTHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCEEEeEEEe--------CCCCh-h-h-hcCCCHHHHHHHHHHHHHcCCc
Confidence 567888899999987654433 22231 1 1 2244578889999999999998
No 39
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=57.27 E-value=17 Score=25.34 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeee
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKH 59 (102)
.++.++.++.++++|.+.|=+...+
T Consensus 21 ~~~~~~~l~~~~~~G~~~vEl~~~~ 45 (262)
T 3p6l_A 21 LFPLTEALDKTQELGLKYIEIYPGH 45 (262)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTE
T ss_pred CCCHHHHHHHHHHcCCCEEeecCCc
Confidence 4589999999999999999888765
No 40
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=57.13 E-value=16 Score=30.33 Aligned_cols=58 Identities=12% Similarity=-0.027 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
-++-++++|...|-|.--+- .+-.-|--... +|..++... ..+=+++|+++|+++||-
T Consensus 159 ~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~-~~~~~~~~~G~~~~~~~lv~~~H~~Gi~ 218 (618)
T 3m07_A 159 KLPYLAELGVTVIEVMPVAQFGGERGWGYDGV-LLYAPHSAYGTPDDFKAFIDAAHGYGLS 218 (618)
T ss_dssp THHHHHHHTCCEEEECCCEECSSSCCCSTTCC-EEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEeCChhccCCCCCCCcCcc-cccccCcCcCCHHHHHHHHHHHHHCCCE
Confidence 36789999999999887653 22222322222 222332222 457799999999999983
No 41
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=57.09 E-value=14 Score=29.93 Aligned_cols=58 Identities=10% Similarity=-0.032 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|...|-|+-=..... -|--..+ +|..++..- ..+=+++|+++|+++||-
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~-~~GYd~~-dy~~id~~~Gt~~dfk~lv~~~H~~Gi~ 235 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPS-HHKYDTA-DYLAIDPQFGDLPTFRRLVDEAHRRGIK 235 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSS-SSCCSCS-EEEEECTTTCCHHHHHHHHHHHHTTTCE
T ss_pred HHhHHHHHcCCCEEEECCcccCCC-CCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 446889999999999885433211 2322222 333333222 357789999999999983
No 42
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=57.05 E-value=11 Score=30.42 Aligned_cols=58 Identities=9% Similarity=-0.074 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl 98 (102)
+-++-+++.|+..|-|+-=+.....-|--.++ +|..++.. ...+=+++|+++|+++||
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~-dy~~id~~~Gt~~df~~lv~~~h~~Gi 93 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVYESPNDDNGYDIS-DYCKIMNEFGTMEDWDELLHEMHERNM 93 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCEECCCTTTTSSCS-EEEEECGGGCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcc-cccccCcccCCHHHHHHHHHHHHHCCC
Confidence 34678999999999997544322111111122 23223221 135678999999999997
No 43
>1gzs_B SOPE; toxin/cell cycle, complex (toxin/cell cycle protein), SOPE, CDC42, salmonella typhimurium, GEF, toxin, lipoprotein; 2.3A {Salmonella typhimurium} SCOP: a.168.1.1 PDB: 1r9k_A 1r6e_A
Probab=56.74 E-value=4.9 Score=28.70 Aligned_cols=18 Identities=17% Similarity=0.137 Sum_probs=16.4
Q ss_pred chHHHHHHHHhhcCCCCC
Q psy1381 84 DLVDYTFGNWFTGGSPGK 101 (102)
Q Consensus 84 Div~el~~a~~~~Gl~~~ 101 (102)
-.++|+-+|+|.+||||.
T Consensus 64 pflkeiGeAA~naGLPGe 81 (165)
T 1gzs_B 64 PFLQEIGEAAKNAGLPGT 81 (165)
T ss_dssp HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 489999999999999984
No 44
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=56.01 E-value=10 Score=26.80 Aligned_cols=26 Identities=23% Similarity=0.203 Sum_probs=22.3
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
.-.|++.++.|++.|.+.+++|- |..
T Consensus 15 ~~~~ee~v~~A~~~Gl~~iaiTD-H~~ 40 (267)
T 2yxo_A 15 EGHPEAYLEEARAKGLKGVVFTD-HSP 40 (267)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEEE-ECC
T ss_pred CCCHHHHHHHHHHcCCCEEEEcC-CCC
Confidence 46889999999999999999887 443
No 45
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=55.97 E-value=65 Score=27.23 Aligned_cols=51 Identities=24% Similarity=0.193 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCC------Ccccc-cCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF------SWNSM-DIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~------~~~s~-~~~p~rDiv~el~~a~~~~Gl 98 (102)
.+-|+.++++|..|+||= || |-.+-.. +|..- ..-| +=++.|++.+++.||
T Consensus 349 ~~~ad~aa~lG~e~fviD----DG---Wf~~r~~d~~~lGdW~~d~~kFP--~Glk~Lad~vh~~Gm 406 (729)
T 4fnq_A 349 VNIAKTEAELGIELFVLD----DG---WFGKRDDDRRSLGDWIVNRRKLP--NGLDGLAKQVNELGM 406 (729)
T ss_dssp HHHHHHHHHHTCCEEEEC----SC---CBTTCCSTTSCTTCCSBCTTTCT--THHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCccEEEEc----ce---eecCCCCCcccCCcEEEChhhcC--ccHHHHHHHHHHCCC
Confidence 467889999999999984 33 3222221 23110 1111 338999999999998
No 46
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=55.67 E-value=31 Score=22.99 Aligned_cols=61 Identities=15% Similarity=-0.023 Sum_probs=34.4
Q ss_pred HHHHHHHHHHc-CC-CeEEEeeeecCCcccCCCCCCCCccccc-CCCCCch--HHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASS-GA-KYVVLTSKHHEGYTLWPSKYAFSWNSMD-IGPKRDL--VDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~a-Ga-kyvvlTtKHHdGF~lW~S~~~~~~~s~~-~~p~rDi--v~el~~a~~~~Gl~ 99 (102)
.++.++.+++. |+ ..+.|..-|.-|-.-|..--. .|.-.. ..|..+- +.++.+.++++|++
T Consensus 112 ~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~-~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~ 177 (182)
T 3can_A 112 IKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGS-IYNPKGYKMQTPSEEVQQQCIQILTDYGLK 177 (182)
T ss_dssp HHHHHHHHHHSSSCCSEEEEEECCC-------------------CCBCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCC-cCcccCCCCCCHHHHHHHHHHHHHHHcCCc
Confidence 46778888888 98 888887777777665532111 221111 2334555 89999999999986
No 47
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=55.50 E-value=16 Score=30.00 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCeEEEeeeecCCc-ccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEGY-TLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdGF-~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
.++-++++|...|-|+--+.-.. ..|--... +|..++..- ..+=+++|+++|+++||.
T Consensus 161 ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~-~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~ 220 (617)
T 1m7x_A 161 LVPYAKWMGFTHLELLPINEHPFDGSWGYQPT-GLYAPTRRFGTRDDFRYFIDAAHAAGLN 220 (617)
T ss_dssp HHHHHHHTTCSEEEESCCEECSCGGGTTSSCS-EEEEECGGGSCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEecccccCCCCCCCCcccc-cCCccCccCCCHHHHHHHHHHHHHCCCE
Confidence 34677999999999875443211 12322222 232332211 368899999999999983
No 48
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=55.14 E-value=27 Score=27.88 Aligned_cols=63 Identities=10% Similarity=-0.004 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCCc-cc----CCCCCC---CCcccc-cCCCCCchHHHHHHHHhhcCCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEGY-TL----WPSKYA---FSWNSM-DIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF-~l----W~S~~~---~~~~s~-~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
-+.+.++++++|||..|=+=+-.-+-. +. |..+.. .-|.-. ..+...+=.++|.+.|++.||+
T Consensus 45 ~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~ 116 (385)
T 1vli_A 45 QAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVI 116 (385)
T ss_dssp HHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCc
Confidence 367899999999999998876666543 22 221110 001000 1134678889999999999996
No 49
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=54.84 E-value=20 Score=30.21 Aligned_cols=59 Identities=14% Similarity=0.060 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcc----------cCCCCCCCCcccccC--CCC------CchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYT----------LWPSKYAFSWNSMDI--GPK------RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~----------lW~S~~~~~~~s~~~--~p~------rDiv~el~~a~~~~Gl~ 99 (102)
..++-++++|...|-|+--+.-... .|--... +|..++. |.. .+=+++|+++|+++||.
T Consensus 206 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~-~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~ 282 (718)
T 2vr5_A 206 QMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPI-NFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIE 282 (718)
T ss_dssp HHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBS-CSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCE
T ss_pred hhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcc-cCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCE
Confidence 4578899999999999865542211 1322222 2333322 221 47899999999999983
No 50
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=54.70 E-value=5.3 Score=27.92 Aligned_cols=52 Identities=17% Similarity=-0.025 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+++++++++.|++++++. -|... ...+ . .....--.+.++++.+.++++|+.
T Consensus 87 ~~~i~~a~~lG~~~v~~~----~g~~~--~~~~--~-~~~~~~~~~~l~~l~~~a~~~gv~ 138 (278)
T 1i60_A 87 KGMMETCKTLGVKYVVAV----PLVTE--QKIV--K-EEIKKSSVDVLTELSDIAEPYGVK 138 (278)
T ss_dssp HHHHHHHHHHTCCEEEEE----CCBCS--SCCC--H-HHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHcCCCEEEEe----cCCCC--CCCC--H-HHHHHHHHHHHHHHHHHHHhcCCE
Confidence 568889999999999883 33321 0011 0 000000246778888888888873
No 51
>2jok_A Putative G-nucleotide exchange factor; guanine nucleotide exchange factor, type III secretion, SOPE, SOPE2, cell invasion; NMR {Burkholderia pseudomallei} SCOP: a.168.1.1 PDB: 2jol_A
Probab=53.58 E-value=6.1 Score=28.68 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=15.9
Q ss_pred hHHHHHHHHhhcCCCCC
Q psy1381 85 LVDYTFGNWFTGGSPGK 101 (102)
Q Consensus 85 iv~el~~a~~~~Gl~~~ 101 (102)
.++||-+|+|.+||||.
T Consensus 70 FLkeiGEAAqnAGLPGe 86 (186)
T 2jok_A 70 FIEALGDAARATGLPGA 86 (186)
T ss_dssp HHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHhCCCCCc
Confidence 79999999999999994
No 52
>2v4x_A JSRV capsid, capsid protein P27; virion, zinc-finger, metal-binding, CAPS protein, structural protein, viral nucleoprotein; HET: MSE; 1.5A {Jaagsiekte sheep retrovirus}
Probab=53.13 E-value=6.7 Score=27.49 Aligned_cols=20 Identities=5% Similarity=-0.285 Sum_probs=16.5
Q ss_pred CCCCchHHHHHHHHhhcCCC
Q psy1381 80 GPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 80 ~p~rDiv~el~~a~~~~Gl~ 99 (102)
+..-=+|+||.+||+++|.-
T Consensus 13 pl~~K~IkeLk~Av~~YGp~ 32 (140)
T 2v4x_A 13 SLPFKQLKELKIACSQYGPT 32 (140)
T ss_dssp CCCHHHHHHHHHHHHHTCTT
T ss_pred CCCHHHHHHHHHHHHHhCCC
Confidence 33566899999999999974
No 53
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=53.10 E-value=12 Score=25.18 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=45.4
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.-+.+..+|.+..+.|-..+|..+|+.=.|-.|-+ -||+. .+.+.+.|.++|+--|++
T Consensus 48 t~~~~~v~pRei~~~Al~~~A~~vIl~HNHPSG~~-~PS~~-----------D~~~T~~l~~a~~ll~I~ 105 (126)
T 2qlc_A 48 TLTASLIHPREIFKAAIRESAHSIILVHNHPSGDV-QPSNA-----------DKQVTSILKKAGDLLQIE 105 (126)
T ss_dssp SCCGGGCCHHHHHHHHHHTTCSEEEEEEECSSSCC-SCCHH-----------HHHHHHHHHHHHHHHTCE
T ss_pred CCCcEeecHHHHHHHHHHcCCcEEEEEecCCCCCC-CCCHH-----------HHHHHHHHHHHHHHCCCe
Confidence 34667899999999999999999999999988743 22211 367888999999877753
No 54
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=53.04 E-value=27 Score=28.82 Aligned_cols=59 Identities=10% Similarity=0.037 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCeEEEeeeecC--CcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHE--GYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHd--GF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-+++.|+..|-|+-=+.. |-.-|.-.++ +|..++..- ..+=+++|+++|+++||-
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~-dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~ 178 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVS-SYRDVNPALGTIGDLREVIAALHEAGIS 178 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCS-CSSSBCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCc-ccCCcCccCCCHHHHHHHHHHHHHCCCE
Confidence 3468889999999998754432 1111111122 233333221 357789999999999983
No 55
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=52.55 E-value=6.4 Score=27.92 Aligned_cols=52 Identities=6% Similarity=-0.158 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++.++++++.|++++++ |-|..-.+ .. . .....--.+.++++++.++++||.
T Consensus 87 ~~~i~~A~~lG~~~v~~----~~g~~~~~--~~-~--~~~~~~~~~~l~~l~~~a~~~Gv~ 138 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRT----FAGQKGSA--DF-S--QQERQEYVNRIRMICELFAQHNMY 138 (286)
T ss_dssp HHHHHHHHHHTCCEEEE----CSCSSCGG--GS-C--HHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCEEEE----cCCCCCcc--cC-c--HHHHHHHHHHHHHHHHHHHHhCCE
Confidence 56888999999999987 22322110 00 0 000000146778888888898873
No 56
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=52.35 E-value=7.4 Score=29.00 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=18.8
Q ss_pred CCHHHHHHHHHHcCCCeEEEee
Q psy1381 36 FDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTt 57 (102)
-||+.|++.++++||.++.+-.
T Consensus 96 ~~p~~~i~~~~~aGAd~itvH~ 117 (246)
T 3inp_A 96 KPVDALIESFAKAGATSIVFHP 117 (246)
T ss_dssp SSCHHHHHHHHHHTCSEEEECG
T ss_pred CCHHHHHHHHHHcCCCEEEEcc
Confidence 4678999999999999998843
No 57
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=51.64 E-value=8.5 Score=27.36 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++.++++++.|++++++. -|+. +......| .--.+.++++.+.++++||.
T Consensus 105 ~~~i~~a~~lG~~~v~~~----~G~~--~~~~~~~~-----~~~~~~l~~l~~~a~~~Gv~ 154 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLH----IGFV--PESSSPDY-----SELVRVTQDLLTHAANHGQA 154 (290)
T ss_dssp HHHHHHHHHHTCSEEEEC----CCCC--CCTTSHHH-----HHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHcCCCEEEEc----CCCC--cccchHHH-----HHHHHHHHHHHHHHHHcCCE
Confidence 688999999999999984 3532 11100001 00246688888999999873
No 58
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=51.39 E-value=11 Score=31.01 Aligned_cols=61 Identities=15% Similarity=-0.018 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcc----cCCCCCC-CCcccccCCCC---------CchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYT----LWPSKYA-FSWNSMDIGPK---------RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~----lW~S~~~-~~~~s~~~~p~---------rDiv~el~~a~~~~Gl~ 99 (102)
.+-++-++++|...|-|+--+.-... -|.+-+. .+|..+....+ .+=+++|+++|+++||-
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~ 197 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIR 197 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCE
Confidence 46678899999999998854322111 1211221 02222221111 48899999999999983
No 59
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=51.12 E-value=13 Score=28.18 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCeEEEe--eeecCCc----c----cCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLT--SKHHEGY----T----LWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlT--tKHHdGF----~----lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|...|-|. .+|-.+. . -|++. |.....-.-.+=+++|+++|+++||-
T Consensus 27 e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~d----y~i~~~~Gt~~df~~lv~~aH~~Gi~ 92 (496)
T 4gqr_A 27 ECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVS----YKLCTRSGNEDEFRNMVTRCNNVGVR 92 (496)
T ss_dssp HHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSC----SCSCBTTBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccC----ceeCCCCCCHHHHHHHHHHHHHCCCE
Confidence 33444678999999885 4664321 1 12222 22111112457799999999999983
No 60
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=51.03 E-value=13 Score=26.01 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
-+|++.++.|++.|.+.+++|- |..
T Consensus 18 ~~~~e~v~~A~~~Gl~~iaiTD-H~~ 42 (245)
T 1m65_A 18 STLSDYIAQAKQKGIKLFAITD-HGP 42 (245)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEE-ECT
T ss_pred CcHHHHHHHHHHCCCCEEEECC-CCC
Confidence 3799999999999999999987 544
No 61
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=51.02 E-value=12 Score=27.23 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=33.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHH
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNW 93 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~ 93 (102)
..+..++.+|++.+.+.|+..+++|.=..||- ..|+..++++++.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt--------------~~G~d~~l~~~l~~~~ 194 (243)
T 4gj1_A 147 EASDKKLMEVLDFYSNKGLKHILCTDISKDGT--------------MQGVNVRLYKLIHEIF 194 (243)
T ss_dssp ---CCBHHHHHHHHHTTTCCEEEEEETTC-------------------CCCHHHHHHHHHHC
T ss_pred ecccchHHHHHHHHhhcCCcEEEeeeeccccc--------------ccCCCHHHHHHHHHhc
Confidence 45789999999999999999999999888863 3455666666666543
No 62
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=50.93 E-value=12 Score=30.55 Aligned_cols=29 Identities=14% Similarity=0.138 Sum_probs=25.7
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCc
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGY 63 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF 63 (102)
..++.+|++.+.++|+..+++|...-||.
T Consensus 451 ~~~~~e~a~~~~~~Ga~~il~t~~~~dG~ 479 (555)
T 1jvn_A 451 DLGVWELTRACEALGAGEILLNCIDKDGS 479 (555)
T ss_dssp EEEHHHHHHHHHHTTCCEEEECCGGGTTT
T ss_pred CCCHHHHHHHHHHcCCCEEEEeCCCCCCC
Confidence 46789999999999999999998888874
No 63
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=50.31 E-value=22 Score=27.91 Aligned_cols=50 Identities=16% Similarity=0.026 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.|+.++++|++.+-+-+-. ..++ .| + ..+.+.+=++.|.+.|++.|||
T Consensus 123 ~~~a~~~k~aGa~~vr~q~fK--------prTs-~~-~-f~glg~egl~~l~~~~~e~Gl~ 172 (350)
T 1vr6_A 123 METAHFLSELGVKVLRGGAYK--------PRTS-PY-S-FQGLGEKGLEYLREAADKYGMY 172 (350)
T ss_dssp HHHHHHHHHTTCCEEECBSCC--------CCCS-TT-S-CCCCTHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCCeeeeeEEe--------CCCC-hH-h-hcCCCHHHHHHHHHHHHHcCCc
Confidence 567888999999987654333 2223 11 1 2244578889999999999997
No 64
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=49.69 E-value=32 Score=23.97 Aligned_cols=20 Identities=10% Similarity=-0.036 Sum_probs=16.5
Q ss_pred CCHHHHHHHHHHcCCCeEEE
Q psy1381 36 FDANHWADILASSGAKYVVL 55 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvl 55 (102)
-+.++++++++++|++-|=+
T Consensus 37 ~~~~~~l~~~~~~G~N~iR~ 56 (387)
T 4awe_A 37 PDIEKGMTAARAAGLTVFRT 56 (387)
T ss_dssp HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEe
Confidence 45688999999999997754
No 65
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=49.39 E-value=21 Score=29.12 Aligned_cols=59 Identities=10% Similarity=-0.098 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCc---ccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGY---TLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF---~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.+.++-++++|+..|-|+-=+.... ..|--..+ +|..++..- ..+=+++|+++|+++||
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~-dy~~idp~~Gt~~df~~Lv~~aH~~Gi 213 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAAT-DHYRIDPRYGSNEDFVRLSTEARKRGM 213 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCS-EEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCcc-ccccccccCCCHHHHHHHHHHHHHcCC
Confidence 5667788999999999986553211 11111122 232333221 35678999999999998
No 66
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=48.98 E-value=7 Score=27.19 Aligned_cols=51 Identities=12% Similarity=0.060 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|++++++. -|.. +...+. .....--.+.++++.+.++++|+
T Consensus 88 ~~~i~~a~~lG~~~v~~~----~g~~--~~~~~~---~~~~~~~~~~l~~l~~~a~~~gv 138 (260)
T 1k77_A 88 DLALEYALALNCEQVHVM----AGVV--PAGEDA---ERYRAVFIDNIRYAADRFAPHGK 138 (260)
T ss_dssp HHHHHHHHHTTCSEEECC----CCBC--CTTSCH---HHHHHHHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHcCCCEEEEC----cCCC--CCCCCH---HHHHHHHHHHHHHHHHHHHHcCC
Confidence 688999999999999873 2432 111110 00000024677888888888887
No 67
>2kgf_A Capsid protein P27; retrovirus capsid protein, N-terminal core domain (SCOP), viral protein; NMR {Mason-pfizer monkey virus}
Probab=48.86 E-value=8.5 Score=26.91 Aligned_cols=20 Identities=10% Similarity=-0.099 Sum_probs=16.5
Q ss_pred CCCCchHHHHHHHHhhcCCC
Q psy1381 80 GPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 80 ~p~rDiv~el~~a~~~~Gl~ 99 (102)
+..-=+|+||.+||+++|.-
T Consensus 18 pl~~K~iKeLk~Av~~YGp~ 37 (140)
T 2kgf_A 18 GFDFAVIKELKTAASQYGAT 37 (140)
T ss_dssp CCCHHHHHHHHHHHHHTCTT
T ss_pred CCCHHHHHHHHHHHHHhCCC
Confidence 33566899999999999974
No 68
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=48.25 E-value=22 Score=27.73 Aligned_cols=59 Identities=7% Similarity=0.003 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CCcccCCCCCCCCcc---------cccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EGYTLWPSKYAFSWN---------SMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dGF~lW~S~~~~~~~---------s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++-++++|+..|-|+-=+. .+ .-|.=... +|. +++.. ...+=+++|+++|+++||-
T Consensus 26 ~~~LdyL~~LGvt~I~l~Pi~~~~~~-~~~GY~~~-dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~ 96 (480)
T 1ud2_A 26 HDDAAALSDAGITAIWIPPAYKGNSQ-ADVGYGAY-DLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDIN 96 (480)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESST-TCCSSSEE-ETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCC-CCCCcCcc-chhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3456788999999998885443 32 01111111 121 12211 1367789999999999973
No 69
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=47.41 E-value=17 Score=29.39 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-++++|...|-|+--+. .+-.-|--... +|..++..- ..|=+++|+++|+++||-
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~-~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~ 183 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGV-YLYAVQNSYGGPEGFRKLVDEAHKKGLG 183 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCC-EEEEECGGGTHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccc-cccccccccCCHHHHHHHHHHHHHcCCE
Confidence 346889999999999886653 22222322222 222222211 357789999999999983
No 70
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=47.35 E-value=39 Score=28.23 Aligned_cols=57 Identities=12% Similarity=0.081 Sum_probs=34.9
Q ss_pred HHHHHHcCCCeEEEeeeecCCc-------------c------cCCCCCCCCcccccC--CCC-------CchHHHHHHHH
Q psy1381 42 ADILASSGAKYVVLTSKHHEGY-------------T------LWPSKYAFSWNSMDI--GPK-------RDLVDYTFGNW 93 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF-------------~------lW~S~~~~~~~s~~~--~p~-------rDiv~el~~a~ 93 (102)
++-++++|...|-|+--+.-+| + -|--... +|..++. +.. .+=+++|+++|
T Consensus 186 L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~~~~~~wGY~~~-~~~a~~~~yg~~~~~~~~~~~efk~lV~~~ 264 (714)
T 2ya0_A 186 LDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQ-NYFSLTGMYSSDPKNPEKRIAEFKNLINEI 264 (714)
T ss_dssp HHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBS-CSSSBCSTTSSCTTSTTHHHHHHHHHHHHH
T ss_pred hHHHHHcCCCEEEECCcccccccCcccccccccccccCcCcCccCCCCc-cCcccChhhccCCCCccchHHHHHHHHHHH
Confidence 6888999999999987664111 0 1211111 2222221 111 37789999999
Q ss_pred hhcCCC
Q psy1381 94 FTGGSP 99 (102)
Q Consensus 94 ~~~Gl~ 99 (102)
+++||.
T Consensus 265 H~~Gi~ 270 (714)
T 2ya0_A 265 HKRGMG 270 (714)
T ss_dssp HHTTCE
T ss_pred HHCCCE
Confidence 999983
No 71
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=47.31 E-value=31 Score=25.62 Aligned_cols=50 Identities=14% Similarity=0.020 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++.++++|+..|.+.+-. ..++ .|. ..|...+=+++|.+.|++.|||
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fk--------prts-~~~--~~g~~~egl~~l~~~~~~~Gl~ 89 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFK--------PRTS-PYS--FQGYGEKALRWMREAADEYGLV 89 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSC--------CCSS-TTS--CCCCTHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCCEEEEEecc--------cCCC-ccc--ccCccHHHHHHHHHHHHHcCCc
Confidence 678899999999987765432 2333 221 1245577789999999999997
No 72
>1p7n_A GAG polyprotein capsid protein P27; retrovirus, immature GAG, V protein; 2.60A {Rous sarcoma virus} SCOP: a.73.1.1
Probab=47.19 E-value=8.9 Score=27.82 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=16.1
Q ss_pred CCchHHHHHHHHhhcCCC
Q psy1381 82 KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 82 ~rDiv~el~~a~~~~Gl~ 99 (102)
..-+|+||.++|+++|+-
T Consensus 44 ~~K~IkeLk~av~~yG~~ 61 (176)
T 1p7n_A 44 EPKLITRLADTVRTKGLR 61 (176)
T ss_dssp CHHHHHHHHHHHHTTCSS
T ss_pred CHHHHHHHHHHHHHhCCC
Confidence 567999999999999975
No 73
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=47.03 E-value=6 Score=27.76 Aligned_cols=51 Identities=20% Similarity=0.111 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+++++++++.|++++++.. +|...... .....--.+.++++++.++++||.
T Consensus 87 ~~~i~~A~~lG~~~v~~~~--------~p~~~~~~--~~~~~~~~~~l~~l~~~a~~~Gv~ 137 (281)
T 3u0h_A 87 PDRARLCARLGARSVTAFL--------WPSMDEEP--VRYISQLARRIRQVAVELLPLGMR 137 (281)
T ss_dssp HHHHHHHHHTTCCEEEEEC--------CSEESSCH--HHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHHcCCCEEEEee--------cCCCCCcc--hhhHHHHHHHHHHHHHHHHHcCCE
Confidence 4588999999999998531 22111100 000000246778888888898873
No 74
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=46.89 E-value=23 Score=29.01 Aligned_cols=57 Identities=7% Similarity=0.028 Sum_probs=37.2
Q ss_pred HHHHHHHH-cCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcC--C
Q psy1381 40 HWADILAS-SGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGG--S 98 (102)
Q Consensus 40 ~Wa~l~k~-aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~G--l 98 (102)
+-++-+++ +|+..|-|+-=+.... -|--... +|..++..- ..+=+++|+++|+++| |
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~-~~GYd~~-dy~~id~~~Gt~~dfk~LV~~~H~~G~~I 255 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPT-NHKYDTQ-DYMAVDPAFGDNSTLQTLINDIHSTANGP 255 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSS-SSCCSCS-EEEEECTTTCCHHHHHHHHHHHHCSSSSS
T ss_pred HhHHHHHhccCCCEEEECCCccCCC-CCCcCcc-chhhhccccCCHHHHHHHHHHHHhCCCCc
Confidence 44678899 9999999886554321 2322233 333333222 3578899999999999 8
No 75
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=46.42 E-value=27 Score=27.69 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CCcccCCCCCC-CCccc---------ccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EGYTLWPSKYA-FSWNS---------MDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dGF~lW~S~~~-~~~~s---------~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++-++++|+..|-|+-=+. .+ .+..+. .+|.. ++.. ...+=+++|+++|+++||-
T Consensus 27 ~~~LdyLk~LGvt~IwL~Pi~~~~~~---~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~ 97 (515)
T 1hvx_A 27 ANEANNLSSLGITALWLPPAYKGTSR---SDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQ 97 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESST---TCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCEEEeCCcccCCCC---CCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3456888999999999985332 32 111111 01111 2211 1367789999999999973
No 76
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=46.32 E-value=24 Score=30.16 Aligned_cols=60 Identities=8% Similarity=0.088 Sum_probs=38.4
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCC-cccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEG-YTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdG-F~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
++.++-++++|...|-|+--+.-+ ..-|--..+ +|..++... ..+=+++|+++|+++||-
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~-dy~a~~~~~Gt~~df~~lv~~~H~~Gi~ 266 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVT-NFFAVSSRSGTPEDLKYLVDKAHSLGLR 266 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCS-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCCCccC-CCCccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 345778899999999998544322 233433333 233333211 357789999999999983
No 77
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=46.00 E-value=26 Score=29.84 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCc-ccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGY-TLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF-~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-++++|...|-|.--+...+ .-|--... +|..++..- ..|=+++|+++|+++||-
T Consensus 268 ~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~-~y~a~~~~yGt~~dfk~lV~~~H~~GI~ 328 (722)
T 3k1d_A 268 ELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVT-SYYAPTSRFGTPDDFRALVDALHQAGIG 328 (722)
T ss_dssp HHHHHHHHHTCSEEEESCCEECSCGGGTTCSCS-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCeEEECCcccCCCCCCCCCCcc-cCcCccccCCCHHHHHHHHHHHHHcCCE
Confidence 344668999999998875442111 23433333 232322211 357789999999999983
No 78
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=45.69 E-value=24 Score=27.76 Aligned_cols=62 Identities=13% Similarity=-0.121 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCc-cc----CCCCCC--CCccc-ccCCCCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGY-TL----WPSKYA--FSWNS-MDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF-~l----W~S~~~--~~~~s-~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+.+.++.+++|||..+=+-+-.-+-+ +. |..+.. ..|.- ...+-..+=.++|.+.|++.||+
T Consensus 37 a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~ 106 (349)
T 2wqp_A 37 AFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMI 106 (349)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCe
Confidence 57889999999999988865554432 11 332210 00000 01234577889999999999996
No 79
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=45.62 E-value=18 Score=25.86 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeee
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKH 59 (102)
.-..-+|++.++.|++.|.+.+++|--.
T Consensus 31 SDg~~t~ee~v~~A~~~Gl~~i~iTDH~ 58 (255)
T 2anu_A 31 SDGHLPLGEVVDLFGKHGVDVVSITDHI 58 (255)
T ss_dssp TTCSSCHHHHHHHHHHTTCSEEEEEEEE
T ss_pred cCCCCCHHHHHHHHHHCCCCEEEEcCCC
Confidence 3346789999999999999999998654
No 80
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=45.54 E-value=7.3 Score=28.12 Aligned_cols=23 Identities=13% Similarity=0.377 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHcCCCeEEEeee
Q psy1381 36 FDANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtK 58 (102)
.||+.|++.+.++||.++.+-.-
T Consensus 72 ~dp~~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 72 VEPEKYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp SSGGGTHHHHHHHTCSEEEEECS
T ss_pred cCHHHHHHHHHHcCCCEEEECcc
Confidence 47899999999999999987654
No 81
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=45.27 E-value=24 Score=28.98 Aligned_cols=58 Identities=10% Similarity=-0.019 Sum_probs=36.3
Q ss_pred HHHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
-++-++++|...|-|+--+. .+-..|--..+ +|..++..- ..+=+++|+++|+++||-
T Consensus 149 ~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~-~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~ 208 (602)
T 2bhu_A 149 KLPYLKELGVTAIQVMPLAAFDGQRGWGYDGA-AFYAPYAPYGRPEDLMALVDAAHRLGLG 208 (602)
T ss_dssp THHHHHHHTCCEEEECCCEECSSSCCCSTTCC-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECChhhccCCCCCCcccc-cCcccCcCCCCHHHHHHHHHHHHHCCCE
Confidence 36788999999999876542 11122322222 232333211 367789999999999983
No 82
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=44.70 E-value=51 Score=26.21 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCeEEEeeeec--CC-----cccCCCCCCCCccccc--CC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHH--EG-----YTLWPSKYAFSWNSMD--IG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHH--dG-----F~lW~S~~~~~~~s~~--~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|...|-|+-=+. ++ -.-++.-+. |..++ .. ...+=+++|+++|+++||-
T Consensus 41 ~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~--~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~ 108 (527)
T 1gcy_A 41 QQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF--WHDFNKNGRYGSDAQLRQAASALGGAGVK 108 (527)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT--CSSSCSCSSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcc--cccCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 456778999999999885441 10 001111111 11222 11 1367799999999999983
No 83
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=44.42 E-value=35 Score=24.82 Aligned_cols=56 Identities=13% Similarity=-0.074 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcc--cCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYT--LWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~--lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
++-+++++++|++.|=+-. |.+|+. .|++.-. .+ ... ...+.+.++++.|+++||-
T Consensus 48 ~~d~~~~k~~G~N~vR~~~-~~~~~~~p~~~~~g~-~~---~~~~~~~~~ld~~~~~a~~~Gi~ 106 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWL-HIEGESTPEFDNNGY-VT---GIDNTLISDMRAYLHAAQRHNIL 106 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EETTSSSSEECTTSC-EE---ECCTTHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEEce-ecCCccCccccCCCc-cc---cCCHHHHHHHHHHHHHHHHcCCE
Confidence 4567888999999886533 344432 2222111 00 001 1245788999999999983
No 84
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=43.73 E-value=27 Score=24.58 Aligned_cols=51 Identities=16% Similarity=0.043 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
...++++-++++++++++.+|++ |.+.|.+ +. .++-+.+|.+++++.+++.
T Consensus 150 ~h~~~~~a~~~~~~~~~k~vi~~--H~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~ 200 (220)
T 1vjn_A 150 YTIGPKEAKEVADLLNAKVIIPM--HYKTKYL-----KF---------NLLPVDDFLKLFDSYERVG 200 (220)
T ss_dssp SSCCHHHHHHHHHHTTCSEEEEE--SCCCSSC-----CT---------TCCCTHHHHTTSSCCEECC
T ss_pred CcCCHHHHHHHHHhcCCCEEEEE--ecccccc-----cC---------CchhHHHHHHHHHhcCCCc
Confidence 35799999999999999999887 7776532 10 1334566777777766654
No 85
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=43.71 E-value=30 Score=28.55 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCeEEEeeeecC--CcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHE--GYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHd--GF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-+++.|+..|-|+-=+.. |-.-|--.+. +|..++.. ...+=+++|+++|+++||-
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~-dy~~vdp~~Gt~~df~~Lv~~aH~~GI~ 171 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVS-DYGQVEPSLGSNDDLVALTSRLREAGIS 171 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBS-CTTSBCGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 3467889999999998754331 2111111111 22222221 1357789999999999983
No 86
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=43.65 E-value=16 Score=28.18 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCeEEEeeeec--CCcc--------cCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHH--EGYT--------LWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHH--dGF~--------lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|...|-|+-=+. .|-. .|.-..+ +|..++.. ...+=+++|+++|+++||-
T Consensus 21 ~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~-~y~~~~~~~G~~~d~~~lv~~~h~~Gi~ 90 (422)
T 1ua7_A 21 HNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPT-SYQIGNRYLGTEQEFKEMCAAAEEYGIK 90 (422)
T ss_dssp HTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEE-EEEEEETTTEEHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccce-eeeccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 345678999999999887432 2211 1211112 23232221 1467889999999999983
No 87
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=43.56 E-value=14 Score=21.85 Aligned_cols=18 Identities=11% Similarity=-0.095 Sum_probs=15.3
Q ss_pred chHHHHHHHHhhcCCCCC
Q psy1381 84 DLVDYTFGNWFTGGSPGK 101 (102)
Q Consensus 84 Div~el~~a~~~~Gl~~~ 101 (102)
=-|.||-+.|+++||+-+
T Consensus 13 lkV~eLK~~L~~rGL~~~ 30 (55)
T 2do1_A 13 LKLAELKQECLARGLETK 30 (55)
T ss_dssp SCHHHHHHHHHHHTCCCC
T ss_pred CcHHHHHHHHHHcCCCCC
Confidence 348999999999999853
No 88
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=43.56 E-value=29 Score=27.07 Aligned_cols=61 Identities=10% Similarity=0.085 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CC----cccCCCCCCCCcc---cccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EG----YTLWPSKYAFSWN---SMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dG----F~lW~S~~~~~~~---s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+-++-++++|+..|-|+-=+. .+ +...+-..-..|+ +++.. ...+=+++|+++|+++||-
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~ 94 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQ 94 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3456788999999999985443 32 2111110000000 12211 1357789999999999983
No 89
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=43.50 E-value=33 Score=26.90 Aligned_cols=82 Identities=11% Similarity=0.181 Sum_probs=50.7
Q ss_pred HHHHHhCCCCCChHH-----hhccCCCCCCCHHHHHHHHHHcCCC-------eEEEeee---------------ecCCcc
Q psy1381 12 KFMERNYKPGFTYQD-----FAKDFTAEFFDANHWADILASSGAK-------YVVLTSK---------------HHEGYT 64 (102)
Q Consensus 12 ~~~~~~~~~~~~Y~~-----~a~~F~p~~fDp~~Wa~l~k~aGak-------yvvlTtK---------------HHdGF~ 64 (102)
.++.++|+....|-. +...|.+..+.++.|.+++++.|.. -+.+... ..||+-
T Consensus 171 ~~li~~Y~~~pay~~~~gkPvv~if~~~~~~~~~W~~l~~~~G~~~ir~~~~d~~fI~~~~~~~~~~~~d~~~~~fDG~y 250 (380)
T 4ad1_A 171 VKLITRYGNHPAFYRKDGKPLFFIYDSYLIEPSEWEKLLSPGGSITIRNTAYDALMIGLWTSSPTVQRPFILNAHFDGFY 250 (380)
T ss_dssp HHHHHHHTTSTTBCCBTTBCEEEETTGGGSCHHHHHHHHSTTCTTCCTTSTTCCEEEEECCSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCceEEECCeEEEEEecCCCCCHHHHHHHHHhcCCcccccCCCCeEEecccccccccchhhhccCceeEEE
Confidence 556667766655543 3457888888889999999999987 2333321 134444
Q ss_pred cCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 65 LWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 65 lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
-|....... .+......+.+.+.|++.|+
T Consensus 251 s~~a~~~~~-----~~~~~~~~~~~~~~~~~~g~ 279 (380)
T 4ad1_A 251 TYFAATGFT-----YGSTPTNWVSMQKWAKENGK 279 (380)
T ss_dssp CCCSSTTSS-----STTCGGGHHHHHHHHHHTTC
T ss_pred ecccccccc-----cCcchhhHHHHHHHHHHCCC
Confidence 443222111 12345667788888988875
No 90
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=43.50 E-value=20 Score=31.34 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=23.2
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEe
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLT 56 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlT 56 (102)
+|++++| ||++.++.+++.|+|+++.+
T Consensus 338 t~D~~~FPdp~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 338 TYDSVDFKGFPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCCTTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred eeChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 3477777 89999999999999999865
No 91
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=43.13 E-value=30 Score=26.98 Aligned_cols=59 Identities=14% Similarity=0.002 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CCcccCCCCCCCCcc---------cccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EGYTLWPSKYAFSWN---------SMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dGF~lW~S~~~~~~~---------s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+-++-++++|+..|-|+-=+. .+ .-|.-... +|. +++.. ...+=+++|+++|+++||-
T Consensus 28 ~~~LdyL~~LGvt~IwL~Pi~~~~~~-~~~GY~~~-dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~ 98 (485)
T 1wpc_A 28 NSDASNLKSKGITAVWIPPAWKGASQ-NDVGYGAY-DLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQ 98 (485)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESST-TCCSCSEE-ETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCC-CCCCCCee-cccccccccccCccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 3456788999999999985443 32 01111111 111 12211 1357789999999999983
No 92
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=43.03 E-value=38 Score=24.52 Aligned_cols=56 Identities=16% Similarity=0.093 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCc----------ccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGY----------TLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF----------~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.++-+++++++|++.|=+-. |.++. -.++.... .++ .++ ..+.+.++++.|+++||
T Consensus 38 ~~~~l~~~k~~G~N~vR~~~-~~~~~~~P~~~~~~~~~~~~~~~-~~~---~~~~~~~~ld~~i~~a~~~Gi 104 (344)
T 1qnr_A 38 VDSTFSHISSSGLKVVRVWG-FNDVNTQPSPGQIWFQKLSATGS-TIN---TGADGLQTLDYVVQSAEQHNL 104 (344)
T ss_dssp HHHHHHHHHHTTCCEEECCC-CCEESSCCSTTCCCSEECCTTCC-EEC---CSTTTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEcc-ccCCCCCCCCCceeeeecCCCCc-ccc---cCHHHHHHHHHHHHHHHHCCC
Confidence 35677889999999886621 22221 11111000 011 112 36778999999999998
No 93
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=42.83 E-value=20 Score=30.74 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=24.1
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEee
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlTt 57 (102)
+|++++| ||++.++.+++.|+|+++.+-
T Consensus 319 t~d~~~FPdp~~mv~~Lh~~G~k~~l~i~ 347 (773)
T 2f2h_A 319 EWDPLTFPDPEGMIRRLKAKGLKICVWIN 347 (773)
T ss_dssp CBCTTTCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred eEChhhCCCHHHHHHHHHHCCCEEEEEec
Confidence 4577888 899999999999999988764
No 94
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=42.61 E-value=22 Score=29.92 Aligned_cols=27 Identities=15% Similarity=0.277 Sum_probs=23.6
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEe
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLT 56 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlT 56 (102)
+|++++| ||++.++.+++.|+|+++.+
T Consensus 223 t~d~~~FPdp~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 223 TWHPYRFPEPKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp CCCTTTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred eEChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 4577776 79999999999999999987
No 95
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=42.26 E-value=34 Score=26.50 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=33.0
Q ss_pred HHHHHHHcCCCeEEEeeeec--CCcccC--CCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHH--EGYTLW--PSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHH--dGF~lW--~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.++-++++|+..|-|+-=+. .|- -| .-... +| .++.. ...+=+++|+++|+++||.
T Consensus 20 lldyL~~LGv~~I~l~Pi~~~~~~~-~~~~gY~~~-~y-~idp~~Gt~~dfk~Lv~~aH~~Gi~ 80 (448)
T 1g94_A 20 CEQYLGPKGYAAVQVSPPNEHITGS-QWWTRYQPV-SY-ELQSRGGNRAQFIDMVNRCSAAGVD 80 (448)
T ss_dssp HHHTHHHHTCCEEEECCCSCBBCSS-SGGGGGSBS-CS-CSCBTTBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECCccccCCCC-CCccccccc-cc-ccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 44567999999999985332 221 11 00111 12 12211 1357789999999999983
No 96
>1em9_A GAG polyprotein capsid protein P27; virus/viral protein; 2.05A {Rous sarcoma virus - prague C} SCOP: a.73.1.1
Probab=42.26 E-value=11 Score=26.98 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=16.1
Q ss_pred CCchHHHHHHHHhhcCCC
Q psy1381 82 KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 82 ~rDiv~el~~a~~~~Gl~ 99 (102)
..-+|+||.+||+++|+-
T Consensus 15 ~~K~ikeLk~A~~~yG~~ 32 (154)
T 1em9_A 15 EPKLITRLADTVRTKGLR 32 (154)
T ss_dssp CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHhCCC
Confidence 567999999999999975
No 97
>4evu_A Putative periplasmic protein YDGH; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MSE; 1.45A {Salmonella enterica subsp}
Probab=42.17 E-value=30 Score=21.49 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCCCeEEEeeee
Q psy1381 39 NHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKH 59 (102)
++..+.|.+-||+|..+|..+
T Consensus 37 ~~lskkAdekGA~~y~Ii~~~ 57 (72)
T 4evu_A 37 YQVAKRAAKKGAKYYHITRQW 57 (72)
T ss_dssp HHHHHHHHHTTCSEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEee
Confidence 689999999999999999765
No 98
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=42.16 E-value=21 Score=27.85 Aligned_cols=61 Identities=10% Similarity=-0.022 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CCcccCCCCCC----CCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EGYTLWPSKYA----FSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dGF~lW~S~~~----~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++-++++|+..|-|+-=+. .+-.-|.+... .+|..++..- ..+=+++|+++|+++||-
T Consensus 46 ~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~ 113 (484)
T 2aaa_A 46 IDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMY 113 (484)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 3446788999999999885443 22111222111 0222222211 357789999999999973
No 99
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=42.05 E-value=20 Score=25.56 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=23.7
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
.++.+|++.+.++|+.++++|...-+|
T Consensus 156 ~~~~e~~~~~~~~G~~~i~~t~~~~~g 182 (266)
T 2w6r_A 156 ILLRDWVVEVEKRGAGEILLTSIDRDG 182 (266)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTT
T ss_pred hhHHHHHHHHHHcCCCEEEEEeecCCC
Confidence 468999999999999999998777666
No 100
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=42.04 E-value=23 Score=23.35 Aligned_cols=47 Identities=11% Similarity=-0.067 Sum_probs=30.3
Q ss_pred hhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 27 FAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 27 ~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++-.|.|...= .+.++.+.+.|+|.++++ .||. =.|+.+.||++||.
T Consensus 61 lavi~~p~~~v-~~~v~e~~~~g~k~v~~~----~G~~---------------------~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 61 TVTLYINPQNQ-LSEYNYILSLKPKRVIFN----PGTE---------------------NEELEEILSENGIE 107 (122)
T ss_dssp EEEECSCHHHH-GGGHHHHHHHCCSEEEEC----TTCC---------------------CHHHHHHHHHTTCE
T ss_pred EEEEEeCHHHH-HHHHHHHHhcCCCEEEEC----CCCC---------------------hHHHHHHHHHcCCe
Confidence 33344443322 345677778899987765 4651 15999999999974
No 101
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=42.00 E-value=18 Score=30.02 Aligned_cols=59 Identities=10% Similarity=0.028 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcc----------cCCCCCCCCcccccCCCC------CchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYT----------LWPSKYAFSWNSMDIGPK------RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~----------lW~S~~~~~~~s~~~~p~------rDiv~el~~a~~~~Gl~ 99 (102)
..++-++++|...|-|+--+.-... -|--... +|..++...+ .+=+++|+++|+++||.
T Consensus 183 ~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~-~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~ 257 (657)
T 2wsk_A 183 VMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPV-AMFALHPAYACSPETALDEFRDAIKALHKAGIE 257 (657)
T ss_dssp HHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEE-EEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCE
T ss_pred cchHHHHHcCCCEEEECCccccCccccccccccccccCcCcc-cCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCE
Confidence 4588899999999988754432110 1322222 2333332222 47899999999999983
No 102
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=41.69 E-value=49 Score=26.61 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHcC--CCeEEEeeeecCCcccCCCCCCCCcccccCCCC-CchHHHHHHHHhhcCCC
Q psy1381 34 EFFDANHWADILASSG--AKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPK-RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aG--akyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~-rDiv~el~~a~~~~Gl~ 99 (102)
-..|+++..+++++-+ .+.+|+++ +|-+ +|. .|=++++++-|+++|+|
T Consensus 180 ~~id~~~le~aI~~~~~~~~~~Vv~t---------~t~~---------g~g~~ddl~~Ia~ia~~~gi~ 230 (450)
T 3bc8_A 180 LRTDLKAVEAKIQELGPEHILCLHST---------TACF---------APRVPDRLEELAVICANYDIP 230 (450)
T ss_dssp EECCHHHHHHHHHHHCGGGEEEEEEE---------SSCC---------TTBCCCCHHHHHHHHHHHTCC
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEEE---------CCcC---------CCceecCHHHHHHHHHHCCCe
Confidence 3679999999998865 56666663 1111 133 68899999999999997
No 103
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=41.64 E-value=16 Score=25.82 Aligned_cols=29 Identities=24% Similarity=0.241 Sum_probs=24.3
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
+..++.++++.+.++|+.++++|...-||
T Consensus 142 ~~~~~~e~~~~~~~~G~~~i~~t~~~~~g 170 (241)
T 1qo2_A 142 EEIDPVSLLKRLKEYGLEEIVHTEIEKDG 170 (241)
T ss_dssp SCCCHHHHHHHHHTTTCCEEEEEETTHHH
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEeecccc
Confidence 34689999999999999999998766554
No 104
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=41.53 E-value=38 Score=28.65 Aligned_cols=60 Identities=20% Similarity=0.093 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCccc------------------CC-CCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTL------------------WP-SKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~l------------------W~-S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.+.++-++++|+..|-|+--|..+..- |+ +....+|..++..- ..+=+++|+++|+++||
T Consensus 256 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI 335 (695)
T 3zss_A 256 ARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGL 335 (695)
T ss_dssp GGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCC
Confidence 456789999999999998766543210 11 00000122333221 35779999999999998
No 105
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=41.16 E-value=43 Score=25.03 Aligned_cols=52 Identities=6% Similarity=-0.042 Sum_probs=31.9
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.++.+.+..+++++|++.|=+---.. .-. |.. + ....+.|.++++.|.++||
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~--------~~~--~~~-~-~~~~~~ld~~v~~a~~~Gi 119 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTA--------DGG--YID-N-PSVKNKVKEAVEAAKELGI 119 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESS--------TTS--TTT-C-GGGHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEEC--------CCC--ccc-C-HHHHHHHHHHHHHHHHCCC
Confidence 45667777777888998877743211 111 100 0 1135778888999999887
No 106
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=40.85 E-value=44 Score=27.99 Aligned_cols=59 Identities=14% Similarity=0.034 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++-++++|+..|-|+--+..+-. |--... +|..++... ..+=+++|+++|+++||-
T Consensus 63 ~~~l~yl~~lGv~~i~l~Pi~~~~~~-~gY~~~-dy~~i~~~~Gt~~d~~~lv~~~h~~gi~ 122 (669)
T 3k8k_A 63 TQKLDYLNQLGVKALWLSPIHPCMSY-HGYDVT-DYTKVNPQLGTESDFDRLVTEAHNRGIK 122 (669)
T ss_dssp HTTHHHHHTTTCSEEEECCCSSBSST-TCCSBS-CTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEecccccCCCC-CCCCcc-cccccccccCCHHHHHHHHHHHHHcCCE
Confidence 44577889999999999854433211 111112 232332221 356689999999999983
No 107
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=40.78 E-value=19 Score=20.80 Aligned_cols=16 Identities=6% Similarity=-0.375 Sum_probs=14.2
Q ss_pred HHHHHHHHhhcCCCCC
Q psy1381 86 VDYTFGNWFTGGSPGK 101 (102)
Q Consensus 86 v~el~~a~~~~Gl~~~ 101 (102)
|.||-+.|+++||+-+
T Consensus 10 V~eLK~~Lk~RGL~~~ 25 (51)
T 1h1j_S 10 VVQLKDLLTKRNLSVG 25 (51)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 7899999999999853
No 108
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=40.73 E-value=97 Score=24.77 Aligned_cols=68 Identities=7% Similarity=-0.108 Sum_probs=38.1
Q ss_pred CCCCCCHHHHHH----HHHHcCCC---------eEEEeeeecCCcccC-CCCCCCCcccccCCCCCchHHHHHHHHhhcC
Q psy1381 32 TAEFFDANHWAD----ILASSGAK---------YVVLTSKHHEGYTLW-PSKYAFSWNSMDIGPKRDLVDYTFGNWFTGG 97 (102)
Q Consensus 32 ~p~~fDp~~Wa~----l~k~aGak---------yvvlTtKHHdGF~lW-~S~~~~~~~s~~~~p~rDiv~el~~a~~~~G 97 (102)
+|-..||...++ .+++.|.. +.+|.. -.+|-... +......|.........|+.++++++|.+.|
T Consensus 102 ~p~~~~pR~iLkr~~~~~~~~G~~~~~~g~E~EF~l~~~-~~~g~~~~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~G 180 (444)
T 3qaj_A 102 TPFEGDPRNNLKRILKEMEDLGFSDFNLGPEPEFFLFKL-DEKGEPTLELNDKGGYFDLAPTDLGENCRRDIVLELEEMG 180 (444)
T ss_dssp CBCSSCHHHHHHHHHHHHHTTTCCEEEEEEEECEEEEEE-CSSSCEEEEESCCCCTTCCTTTSCCTTHHHHHHHHHHTTT
T ss_pred CCCCCChHHHHHHHHHHHHHcCCCeeeEEeceEEEEEec-CCCCCCCCcCcCCCCccccCCCcchHHHHHHHHHHHHHCC
Confidence 455789976655 45778887 334432 12231111 1111111222222336799999999999999
Q ss_pred CCC
Q psy1381 98 SPG 100 (102)
Q Consensus 98 l~~ 100 (102)
|+-
T Consensus 181 i~v 183 (444)
T 3qaj_A 181 FEI 183 (444)
T ss_dssp CCE
T ss_pred CCe
Confidence 974
No 109
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=40.51 E-value=13 Score=21.93 Aligned_cols=14 Identities=7% Similarity=0.266 Sum_probs=12.3
Q ss_pred HHHHHHHHHHcCCC
Q psy1381 38 ANHWADILASSGAK 51 (102)
Q Consensus 38 p~~Wa~l~k~aGak 51 (102)
|.+|.+++.++|..
T Consensus 35 pp~W~~ll~~sGIt 48 (59)
T 1cee_B 35 DPDLRSLFSRAGIS 48 (59)
T ss_dssp CHHHHHHHTTTTSC
T ss_pred CHHHHHHHHHcCCC
Confidence 78999999999864
No 110
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=40.49 E-value=38 Score=26.27 Aligned_cols=60 Identities=10% Similarity=0.096 Sum_probs=35.8
Q ss_pred HHHHHHHHHHcCCCeEEEee--eecCCcccCCCCCC-CCcc---------cccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTS--KHHEGYTLWPSKYA-FSWN---------SMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTt--KHHdGF~lW~S~~~-~~~~---------s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
-.+.++-++++|...|-|+- +|-.|- |...+. .+|. .++.. ...+=+++|+++|+++||-
T Consensus 30 i~~~Ldyl~~lGvt~I~l~Pi~~~~~~~--~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~ 102 (435)
T 1mxg_A 30 IRSKIPEWYEAGISAIWLPPPSKGMSGG--YSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIK 102 (435)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGG--GCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEeCCcccCCCCC--CCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 34566788999999999874 343321 111121 0121 11111 1357789999999999973
No 111
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=40.23 E-value=13 Score=26.12 Aligned_cols=56 Identities=9% Similarity=-0.232 Sum_probs=30.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|+++++... |- .|...+...... .....--.+.++++.+.++++|+
T Consensus 91 ~~~i~~a~~lG~~~v~~~~-~~~~g~~~~~~~~~~---~~~~~~~~~~l~~l~~~a~~~gv 147 (290)
T 2qul_A 91 KRLLDDCHLLGAPVFAGLT-FCAWPQSPPLDMKDK---RPYVDRAIESVRRVIKVAEDYGI 147 (290)
T ss_dssp HHHHHHHHHHTCSEEEEEE-EEESSCCCCTTCCCC---HHHHHHHHHHHHTTHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEeec-cccCCcccCCCcccH---HHHHHHHHHHHHHHHHHHHHcCC
Confidence 5788999999999998432 21 132101111110 00000014667777788888886
No 112
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=40.02 E-value=70 Score=22.95 Aligned_cols=46 Identities=15% Similarity=0.135 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.++-++.++++|++-|=+- +++|. .|+. ...+.+.++++.|+++||
T Consensus 33 ~~~~~~~i~~~G~N~VRi~--~~~~~-~~~~------------~~~~~ld~~v~~a~~~Gi 78 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIV--LSDGG-QWEK------------DDIDTIREVIELAEQNKM 78 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEE--ECCSS-SSCC------------CCHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHcCCCEEEEE--ecCCC-ccCc------------cHHHHHHHHHHHHHHCCC
Confidence 4566888999999998663 23332 1221 136779999999999997
No 113
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=39.60 E-value=22 Score=27.81 Aligned_cols=52 Identities=8% Similarity=-0.026 Sum_probs=31.3
Q ss_pred HHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 46 ASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 46 k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
++.|+..|-|+-=+...- -|--..+ +|..++.. ...+=+++|+++|+++||-
T Consensus 45 ~~LGv~~I~L~Pi~~~~~-~~GYd~~-dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~ 97 (488)
T 1wza_A 45 ADLGVNGIWLMPIFKSPS-YHGYDVT-DYYKINPDYGTLEDFHKLVEAAHQRGIK 97 (488)
T ss_dssp SSCCCSEEEECCCEECSS-SSCCSCS-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCccEEEECCcccCCC-CCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 999999998875433210 0211222 23222221 1357789999999999983
No 114
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=38.86 E-value=21 Score=27.75 Aligned_cols=58 Identities=9% Similarity=-0.044 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|+..|-|+-=+.... -|--... +|..++.. ...+=+++|+++|+++||-
T Consensus 54 ~~LdyL~~LGv~~I~l~Pi~~~~~-~~gY~~~-dy~~idp~~Gt~~df~~lv~~~h~~Gi~ 112 (475)
T 2z1k_A 54 EKLPYLLDLGVEAIYLNPVFASTA-NHRYHTV-DYFQVDPILGGNEALRHLLEVAHAHGVR 112 (475)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESS-TTCCSEE-EEEEECGGGTCHHHHHHHHHHHHHTTCE
T ss_pred HHhHHHHHcCCCEEEECCCcCCCC-CCCcCCC-CcCccCcccCCHHHHHHHHHHHHHCCCE
Confidence 446788999999999985433110 1111111 22222211 1357789999999999983
No 115
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=38.56 E-value=48 Score=27.95 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=35.3
Q ss_pred HHHHHHcCCCeEEEeeeecCCcc-------------cCCCCCCCCccccc--CCCC------CchHHHHHHHHhhcCCC
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYT-------------LWPSKYAFSWNSMD--IGPK------RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~-------------lW~S~~~~~~~s~~--~~p~------rDiv~el~~a~~~~Gl~ 99 (102)
++-++++|...|-|.--+.-... -|--... +|..++ .|.. .+=+++|+++|+++||-
T Consensus 211 l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~-dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~ 288 (750)
T 1bf2_A 211 ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTE-NYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 288 (750)
T ss_dssp HHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBS-CSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcc-cccccCccccCCCCCccHHHHHHHHHHHHHHCCCE
Confidence 67889999999998865542111 1222222 222222 2221 57899999999999983
No 116
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=38.45 E-value=22 Score=20.48 Aligned_cols=17 Identities=12% Similarity=-0.050 Sum_probs=14.9
Q ss_pred hHHHHHHHHhhcCCCCC
Q psy1381 85 LVDYTFGNWFTGGSPGK 101 (102)
Q Consensus 85 iv~el~~a~~~~Gl~~~ 101 (102)
-|.||-+.|+++|||-+
T Consensus 14 kV~eLK~eLk~RgL~~~ 30 (50)
T 1zrj_A 14 KVNELREELQRRGLDTR 30 (50)
T ss_dssp CHHHHHHHHHHTTCCCC
T ss_pred cHHHHHHHHHHcCCCCC
Confidence 48899999999999864
No 117
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=38.26 E-value=18 Score=26.27 Aligned_cols=56 Identities=13% Similarity=0.177 Sum_probs=33.9
Q ss_pred CCCCCCCHHHH-HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 31 FTAEFFDANHW-ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 31 F~p~~fDp~~W-a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
|....-+|.++ .+.++++|+.+|=|....-+ ..|+.... .+-++++.+.++++||.
T Consensus 29 ~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~--~~~~~~~~-----------~~~~~~~~~~l~~~Gl~ 85 (316)
T 3qxb_A 29 AVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTD--PWWPDIER-----------DRRAIAYAKAFRKAGLT 85 (316)
T ss_dssp GTTTSCSHHHHHHHHHHTSCCCEEEEETTTSC--TTSCHHHH-----------HHHHHHHHHHHHHTTCE
T ss_pred HHhccCCHHHHHHHHHHHcCCCEEEeeccccC--ccccccch-----------hhHHHHHHHHHHHcCCe
Confidence 33444456666 56668999999988754221 11221111 12578888899999884
No 118
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=38.23 E-value=26 Score=29.42 Aligned_cols=30 Identities=7% Similarity=0.170 Sum_probs=24.0
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEeeee
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlTtKH 59 (102)
+|++++| ||++.++.+++.|+|+++++-=+
T Consensus 211 t~d~~~FPdp~~mv~~Lh~~G~k~v~~idP~ 241 (666)
T 3nsx_A 211 TVNEKNFPDFPEFVKEMKDQELRLIPIIDAG 241 (666)
T ss_dssp CCCTTTCTTHHHHHHHHHTTTCEEEEEEESC
T ss_pred ccChhhCCCHHHHHHHHHHcCceEEeeeccc
Confidence 4466655 79999999999999999886443
No 119
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=38.11 E-value=17 Score=24.48 Aligned_cols=25 Identities=16% Similarity=0.028 Sum_probs=21.2
Q ss_pred cccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 76 SMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 76 s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
.....|+.||+..|.+.|+++|+..
T Consensus 13 ~lrl~~Gedl~~~i~~~~~~~~i~~ 37 (146)
T 2h6l_A 13 LLRLDYGKDLVRQIEEFLEEKGIHA 37 (146)
T ss_dssp EEECCTTSBHHHHHHHHHHHHTCCS
T ss_pred EEEECCCCCHHHHHHHHHHHcCCCE
Confidence 3466789999999999999999863
No 120
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=38.01 E-value=19 Score=29.87 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=36.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+-++-++++|+..|-|+-=..... -|.-.++ +|..++.. ...+-+++|+++|+++||-
T Consensus 268 ~~kLdyLk~LGvt~IwL~Pi~~s~~-~~GYd~~-Dy~~idp~~Gt~~df~~Lv~~aH~~Gik 327 (696)
T 4aee_A 268 MKHIDHLEDLGVETIYLTPIFSSTS-YHRYDTI-DYKSIDKYLGTMEDFEKLVQVLHSRKIK 327 (696)
T ss_dssp HTTHHHHHHHTCCEEEECCCEEESS-SSCCSEE-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhHHHHHcCCCEEEECCcccCCC-CCCcCcc-cccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 4557889999999999885433211 0111111 22222221 1367789999999999983
No 121
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=37.90 E-value=62 Score=28.52 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=35.0
Q ss_pred HHHHHHcCCCeEEEeeeecCCc-------------c------cCCCCCCCCccccc--CCC-------CCchHHHHHHHH
Q psy1381 42 ADILASSGAKYVVLTSKHHEGY-------------T------LWPSKYAFSWNSMD--IGP-------KRDLVDYTFGNW 93 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF-------------~------lW~S~~~~~~~s~~--~~p-------~rDiv~el~~a~ 93 (102)
++-++++|...|-|+--+.-+| + -|--... +|...+ .+. ..+=+++|+++|
T Consensus 493 LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~~~~y~~~~~~ynwGY~~~-~y~a~~~~ygt~p~~~~~~~~efk~lV~~~ 571 (1014)
T 2ya1_A 493 LDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQ-NYFSLTGMYSSDPKNPEKRIAEFKNLINEI 571 (1014)
T ss_dssp HHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBS-CSSSBCSTTCSCTTCTTHHHHHHHHHHHHH
T ss_pred hHHHHHcCCCeEEecCcccccccccccccccccccccCcCCcccCCCcC-cCccccccccCCCccccchHHHHHHHHHHH
Confidence 6788999999999987764211 0 1211111 222222 111 137789999999
Q ss_pred hhcCCC
Q psy1381 94 FTGGSP 99 (102)
Q Consensus 94 ~~~Gl~ 99 (102)
+++||-
T Consensus 572 H~~GI~ 577 (1014)
T 2ya1_A 572 HKRGMG 577 (1014)
T ss_dssp HTTTCE
T ss_pred HHcCCE
Confidence 999983
No 122
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=37.78 E-value=29 Score=26.97 Aligned_cols=60 Identities=13% Similarity=0.061 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCCeEEEee--eecCCcccCCCCCC----CCcccccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTS--KHHEGYTLWPSKYA----FSWNSMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTt--KHHdGF~lW~S~~~----~~~~s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-++++|+..|-|+- +|-.|-.-|.+... .+|..++.. ...+=+++|+++|+++||-
T Consensus 47 ~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~ 113 (478)
T 2guy_A 47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMY 113 (478)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCE
Confidence 456788999999999875 44433222222221 012222211 1357789999999999973
No 123
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=37.69 E-value=17 Score=26.16 Aligned_cols=54 Identities=9% Similarity=-0.232 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeec-CCcccCCCCC-CCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH-EGYTLWPSKY-AFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~-~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|+++++..+ +. .|. ++... + . .....--.+.++++.+.++++|+
T Consensus 110 ~~~i~~A~~lG~~~v~~~~-~~~~g~--~~~~~~~--~-~~~~~~~~~~l~~l~~~a~~~gv 165 (309)
T 2hk0_A 110 ERTLSNVAKLDIHTIGGAL-HSYWPI--DYSQPVD--K-AGDYARGVEGINGIADFANDLGI 165 (309)
T ss_dssp HHHHHHHHHTTCCEEEECT-TSCSSC--CTTSCCC--H-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEeec-cccccc--cCCCcCC--h-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 5788999999999998322 10 121 10000 0 0 00000014677888888888887
No 124
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=37.65 E-value=65 Score=28.08 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=35.3
Q ss_pred HHHHHHcCCCeEEEeeeecCCcc---------cC---CCCCCC-----CcccccC--CCC-------CchHHHHHHHHhh
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYT---------LW---PSKYAF-----SWNSMDI--GPK-------RDLVDYTFGNWFT 95 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~---------lW---~S~~~~-----~~~s~~~--~p~-------rDiv~el~~a~~~ 95 (102)
++-++++|...|-|.--|.-|+. -+ .+.+++ +|..++. +.. .+=+++|+++|++
T Consensus 302 L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynwGY~~~~~~a~~~~yGt~p~~~~~~~~efk~lV~~~H~ 381 (877)
T 3faw_A 302 LDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSARIAELKQLIHDIHK 381 (877)
T ss_dssp HHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCSBSCSSSBCSTTCSCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcchhcccccccccccccccccCCCCCCccCcCcCccccccccccCCCCCcchHHHHHHHHHHHHHH
Confidence 68899999999999877742111 01 111111 2223221 211 3668999999999
Q ss_pred cCCC
Q psy1381 96 GGSP 99 (102)
Q Consensus 96 ~Gl~ 99 (102)
+||-
T Consensus 382 ~GI~ 385 (877)
T 3faw_A 382 RGMG 385 (877)
T ss_dssp TTCE
T ss_pred cCCE
Confidence 9983
No 125
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=37.14 E-value=34 Score=25.19 Aligned_cols=24 Identities=17% Similarity=0.146 Sum_probs=21.2
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEee
Q psy1381 34 EFFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
....|++.++.|++.|.+.+.+|=
T Consensus 15 g~~~~~elv~~A~~~Gl~~iaiTD 38 (292)
T 2yb1_A 15 GALTPTEVIDRAAARAPALLALTD 38 (292)
T ss_dssp CSSCHHHHHHHHHTTCCSEEEECC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEec
Confidence 467899999999999999998875
No 126
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=37.04 E-value=30 Score=29.87 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=24.9
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEeeee
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlTtKH 59 (102)
+|++++| ||++.++.+++.|+|+++.+--|
T Consensus 315 twd~~~FPdp~~mv~~Lh~~G~k~vl~i~P~ 345 (817)
T 4ba0_A 315 DWDKENFPTPLDMMADFKQQGVKTVLITEPF 345 (817)
T ss_dssp SCCTTTCSCHHHHHHHHHHTTCEEEEEECSE
T ss_pred ccccccCCCHHHHHHHHHHCCCEEEEEeCCC
Confidence 4577766 89999999999999999987443
No 127
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=36.67 E-value=41 Score=23.47 Aligned_cols=41 Identities=5% Similarity=-0.052 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.|+.+++.+.++||.++.+-. ..+.+.+.++++.+++.|.+
T Consensus 68 ip~t~~~~~~~~Gad~itvh~----------------------~~g~~~l~~~~~~~~~~g~~ 108 (216)
T 1q6o_A 68 AGKILSRMCFEANADWVTVIC----------------------CADINTAKGALDVAKEFNGD 108 (216)
T ss_dssp CHHHHHHHHHHTTCSEEEEET----------------------TSCHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHhCCCCEEEEec----------------------cCCHHHHHHHHHHHHHcCCC
Confidence 588888888899988776521 11245567777777777653
No 128
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=36.60 E-value=11 Score=28.95 Aligned_cols=54 Identities=22% Similarity=0.119 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGG 97 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~G 97 (102)
+++++++++.|++++++. -|+.-+......+. .....--.+.++++++.++++|
T Consensus 119 ~~~i~~A~~LGa~~vvv~----~G~~g~~~~~~~~~-~~~~~~~~e~L~~l~~~A~~~G 172 (394)
T 1xla_A 119 LHNIDLAAEMGAETFVMW----GGREGSEYDGSKDL-AAALDRMREGVDTAAGYIKDKG 172 (394)
T ss_dssp HHHHHHHHHTTCSEEEEC----CTTCEESSGGGCCH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEC----CCCCccccccccCH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 578999999999999873 34321110000000 0000001467788888888888
No 129
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=36.46 E-value=14 Score=28.07 Aligned_cols=54 Identities=19% Similarity=0.011 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGG 97 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~G 97 (102)
+++++++++.|++++++. -|..-++.....+. .....--.+.++++.+.++++|
T Consensus 119 ~~~i~~A~~LGa~~vvv~----~g~~~~~~~~~~~~-~~~~~~~~e~L~~l~~~A~~~G 172 (386)
T 1muw_A 119 IRNIDLAVELGAKTYVAW----GGREGAESGAAKDV-RVALDRMKEAFDLLGEYVTSQG 172 (386)
T ss_dssp HHHHHHHHHHTCSEEEEC----CTTCEESSTTSCCH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEC----CCCCcccccccCCH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 578999999999999873 33321111000000 0000001466788888888888
No 130
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=36.09 E-value=13 Score=26.91 Aligned_cols=20 Identities=20% Similarity=0.444 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHcCCCeEEE
Q psy1381 36 FDANHWADILASSGAKYVVL 55 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvl 55 (102)
-||+.|++.+.++|+.++.+
T Consensus 74 ~~p~~~i~~~~~aGad~itv 93 (228)
T 3ovp_A 74 SKPEQWVKPMAVAGANQYTF 93 (228)
T ss_dssp SCGGGGHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEE
Confidence 46788999999999999888
No 131
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=35.84 E-value=29 Score=24.43 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
.++.++++.+.++|+..+++|...-+|
T Consensus 151 ~~~~e~~~~~~~~G~~~i~~~~~~~~g 177 (253)
T 1thf_D 151 ILLRDWVVEVEKRGAGEILLTSIDRDG 177 (253)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEeccCCC
Confidence 368999999999999999998766654
No 132
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=35.78 E-value=25 Score=25.00 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=24.6
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
.+.+++.++++.+.++|+.++.++....+
T Consensus 32 ~~~~~~~~~a~~~~~~G~~~i~v~d~~~~ 60 (247)
T 3tdn_A 32 NTGILLRDWVVEVEKRGAGEILLTSIDRD 60 (247)
T ss_dssp EEEEEHHHHHHHHHHTTCSEEEEEETTTT
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEecCcc
Confidence 35689999999999999999999876443
No 133
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=35.59 E-value=23 Score=27.94 Aligned_cols=68 Identities=4% Similarity=-0.010 Sum_probs=40.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCC-----eEEEeeeecCCccc--CC--CCCCCCcccc-cCCCCCchHHHHHHHHhhcCCC
Q psy1381 31 FTAEFFDANHWADILASSGAK-----YVVLTSKHHEGYTL--WP--SKYAFSWNSM-DIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 31 F~p~~fDp~~Wa~l~k~aGak-----yvvlTtKHHdGF~l--W~--S~~~~~~~s~-~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.+.=-+.+.+++|++|||. .|=|-+..-|-+.- +. +..+ -|... ..--..+=.++|.+.|++.||+
T Consensus 16 HnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~-~~~~~~~~el~~e~~~~L~~~~~~~Gi~ 93 (350)
T 3g8r_A 16 HMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVK-YVKRFEETRLQPEQMQKLVAEMKANGFK 93 (350)
T ss_dssp TTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSS-SHHHHHHTCCCHHHHHHHHHHHHHTTCE
T ss_pred ccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHH-HHHHHHHhcCCHHHHHHHHHHHHHcCCc
Confidence 334444468999999999997 77777666554320 00 1111 01000 0113456778999999999996
No 134
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=35.49 E-value=79 Score=22.86 Aligned_cols=45 Identities=11% Similarity=-0.089 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
..|+++..+++.+...+-+++ ..++.| .. .| +.++.+.|+++|+.
T Consensus 149 ~~d~~~l~~~l~~~~~~~v~~-~~p~~~-------~~-----------~~-l~~i~~l~~~~~~~ 193 (407)
T 2dkj_A 149 LIDLEEVRRLALEHRPKVIVA-GASAYP-------RF-----------WD-FKAFREIADEVGAY 193 (407)
T ss_dssp SCCHHHHHHHHHHHCCSEEEE-CCSSCC-------SC-----------CC-HHHHHHHHHHHTCE
T ss_pred ccCHHHHHHHHhhcCCeEEEE-eccccC-------CC-----------CC-HHHHHHHHHHcCCE
Confidence 578999999888656666665 444544 11 12 68999999999863
No 135
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=35.35 E-value=32 Score=23.48 Aligned_cols=20 Identities=35% Similarity=0.418 Sum_probs=17.8
Q ss_pred CC-HHHHHHHHHHcCCCeEEE
Q psy1381 36 FD-ANHWADILASSGAKYVVL 55 (102)
Q Consensus 36 fD-p~~Wa~l~k~aGakyvvl 55 (102)
.| |+.+++.+.++||.++++
T Consensus 63 ~di~~~~~~~a~~~Gad~v~v 83 (207)
T 3ajx_A 63 MDAGELEADIAFKAGADLVTV 83 (207)
T ss_dssp CSCHHHHHHHHHHTTCSEEEE
T ss_pred cCccHHHHHHHHhCCCCEEEE
Confidence 36 899999999999999876
No 136
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=35.20 E-value=69 Score=24.36 Aligned_cols=17 Identities=6% Similarity=-0.156 Sum_probs=14.6
Q ss_pred CchHHHHHHHHhhcCCC
Q psy1381 83 RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl~ 99 (102)
-|.+.+|++.||+.|+.
T Consensus 188 ~~~~~~f~~~~r~~Gi~ 204 (304)
T 3fst_A 188 VESYLRFRDRCVSAGID 204 (304)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 57888999999999863
No 137
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=34.93 E-value=23 Score=27.51 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=39.2
Q ss_pred hhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 27 FAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 27 ~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
++=.|.|-.+-+++-.+++.++|.+.+|+.| +||.- ....+|.+.+|++|+
T Consensus 82 laVi~vp~~~a~~ai~ea~~~~Gv~~vViiT---~G~~e------------------~~~~~l~~~a~~~g~ 132 (334)
T 3mwd_B 82 VLINFASLRSAYDSTMETMNYAQIRTIAIIA---EGIPE------------------ALTRKLIKKADQKGV 132 (334)
T ss_dssp EEEECCCTTTHHHHHHHHTTSTTCCEEEECC---SCCCH------------------HHHHHHHHHHHHHTC
T ss_pred EEEEecCHHHHHHHHHHHHHHCCCCEEEEEC---CCCCH------------------HHHHHHHHHHHHcCC
Confidence 3445778888888999999999999999966 36643 245778888888886
No 138
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=34.90 E-value=23 Score=23.98 Aligned_cols=24 Identities=8% Similarity=-0.080 Sum_probs=20.5
Q ss_pred ccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 77 MDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 77 ~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
....|+.||+..|.+.|+++|+..
T Consensus 17 ~rL~~Gedl~~~l~~~~~~~~i~~ 40 (147)
T 3hwu_A 17 MVLRHGDNVLQNLEQLARDEHIPS 40 (147)
T ss_dssp EEEETTCBHHHHHHHHHHHTTCSE
T ss_pred EEECCCChHHHHHHHHHHHcCCCE
Confidence 355689999999999999999863
No 139
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=34.85 E-value=73 Score=24.34 Aligned_cols=52 Identities=12% Similarity=-0.021 Sum_probs=34.7
Q ss_pred HHHHHHHHHcCCCeEEEeee-----ecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSK-----HHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtK-----HHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+-++.+++.|+++|.|+.- =+.+=|-|.+. .+|..+=|.++++.|++.||.
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~---------~t~~~~~v~~~~~~Ak~~GL~ 112 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPP---------VTVSDDEIASMAELAHALGLK 112 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTT---------TBCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCC---------CCCCHHHHHHHHHHHHHCCCE
Confidence 56777889999999988732 11112223211 224567789999999999983
No 140
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=34.77 E-value=35 Score=28.13 Aligned_cols=49 Identities=8% Similarity=0.017 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccc-cCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSM-DIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~-~~~p~rDiv~el~~a~~~~Gl 98 (102)
.+-|+.+++.|..+++| | +-|.+... +|..- ..-| | ++.|++.+++.||
T Consensus 215 ~~~ad~~~~~G~~~~~I-----D--dgW~~~~G-dw~~d~~kFP--~-lk~lvd~lh~~Gl 264 (564)
T 1zy9_A 215 LKNLKLAKNFPFEVFQI-----D--DAYEKDIG-DWLVTRGDFP--S-VEEMAKVIAENGF 264 (564)
T ss_dssp HHHHHHGGGTTCSEEEE-----C--TTSEEETT-EEEEECTTCC--C-HHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCcEEEE-----C--cccccccC-CcccCcccCC--C-HHHHHHHHHHCCC
Confidence 44566667899999998 3 33444444 34211 1122 5 9999999999997
No 141
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=34.72 E-value=36 Score=24.59 Aligned_cols=28 Identities=18% Similarity=0.223 Sum_probs=23.8
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
+...++++-+++++++++|.+|+|=-.+
T Consensus 238 ~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 265 (293)
T 3md7_A 238 PSHFSLGEALEWIEKLSPKRAILTHMHV 265 (293)
T ss_dssp TTBCCHHHHHHHHHHHCCSEEEEESBCT
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECCCC
Confidence 5678999999999999999999984333
No 142
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=34.56 E-value=56 Score=24.63 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCch-------HHHHHHHHhhcCCCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDL-------VDYTFGNWFTGGSPG 100 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDi-------v~el~~a~~~~Gl~~ 100 (102)
.|| +.++++++.|+.+|++.. .|-+ . ++...| ..|+ +.+.++.|+++|++.
T Consensus 121 ~d~-~~~~~~a~~~~~vVlmh~---~G~p--~--------tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~ 179 (282)
T 1aj0_A 121 SEP-GALEAAAETGLPVCLMHM---QGNP--K--------TMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAK 179 (282)
T ss_dssp CST-THHHHHHHHTCCEEEECC---SSCT--T--------CCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCH-HHHHHHHHhCCeEEEEcc---CCCC--c--------cccccCccchHHHHHHHHHHHHHHHHHHcCCCh
Confidence 554 678999999999888743 4422 1 111111 2344 455677888999973
No 143
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=34.43 E-value=41 Score=27.39 Aligned_cols=47 Identities=13% Similarity=-0.142 Sum_probs=32.2
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.|..+-|+... .+.++|.| +|+.+ +||. ...-.+|.+.+|++|+.
T Consensus 42 I~vPa~~v~~~v~-e~~~~Gv~-~viis---~Gf~------------------~~~~~~l~~~A~~~g~r 88 (480)
T 3dmy_A 42 ISVAGEYAAELAN-QALDRNLN-VMMFS---DNVT------------------LEDEIQLKTRAREKGLL 88 (480)
T ss_dssp ECSCHHHHHHHHH-HHHHTTCE-EEECC---CCCC------------------HHHHHHHHHHHHHTTCC
T ss_pred EecCHHHHHHHHH-HHHhcCCC-EEEEC---CCCC------------------HHHHHHHHHHHHHcCCE
Confidence 4455555555544 45588999 77665 7775 34567899999999974
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.37 E-value=29 Score=24.43 Aligned_cols=27 Identities=33% Similarity=0.447 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
.++.++++.+.++|+..+++|...-+|
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g 178 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDG 178 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTT
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCC
Confidence 578999999999999999998765555
No 145
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=33.96 E-value=24 Score=27.61 Aligned_cols=58 Identities=7% Similarity=-0.035 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-++++|+..|-|+-=+.... -|--..+ +|..++..- ..+=+++|+++|+++||-
T Consensus 60 ~~LdyL~~LGv~~I~L~Pi~~~~~-~~GYd~~-dy~~idp~~Gt~~df~~Lv~~aH~~Gi~ 118 (488)
T 2wc7_A 60 EDLDYIQNLGINAIYFTPIFQSAS-NHRYHTH-DYYQVDPMLGGNEAFKELLDAAHQRNIK 118 (488)
T ss_dssp HTHHHHHHHTCCEEEESCCEEECT-TCTTSEE-EEEEECGGGTHHHHHHHHHHHHHHTTCE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCC-CCCCCCc-CccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 456788999999999985432110 0111111 222222111 257789999999999983
No 146
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=33.94 E-value=38 Score=22.98 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCC-CeEEEeeeecCCcccCCCCCCCCccccc-CCCCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGA-KYVVLTSKHHEGYTLWPSKYAFSWNSMD-IGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGa-kyvvlTtKHHdGF~lW~S~~~~~~~s~~-~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.++.++.+++.|. ..+.+..-|--|...|..-.. .|.... ..|..+.+.++.+.+++.|+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 242 (245)
T 3c8f_A 180 AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGE-EYKLDGVKPPKKETMERVKGILEQYGHK 242 (245)
T ss_dssp HHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTC-CCTTTTCCCCCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhcCCCceeEEEeccccChhHHHhhCc-ccccccCCCCCHHHHHHHHHHHHhcCCe
Confidence 4578888889886 777777666655554431111 111111 244677899999999999985
No 147
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=33.80 E-value=22 Score=23.88 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=21.0
Q ss_pred cccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 76 SMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 76 s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
.....|+.||+..|.+.|+++|+..
T Consensus 13 ~lrl~~Gedl~~~i~~~~~~~~i~~ 37 (143)
T 2dt4_A 13 LFRVPEGEELLTYIKNFCKKEGIET 37 (143)
T ss_dssp EEEECTTCBHHHHHHHHHHHHTCCS
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCE
Confidence 3456789999999999999999864
No 148
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=33.55 E-value=31 Score=23.75 Aligned_cols=28 Identities=36% Similarity=0.559 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCc
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGY 63 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF 63 (102)
.++.++++.+.++|+.+++++....+|.
T Consensus 154 ~~~~e~~~~~~~~G~d~i~~~~~~~~g~ 181 (253)
T 1h5y_A 154 LDAVKWAKEVEELGAGEILLTSIDRDGT 181 (253)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTT
T ss_pred CCHHHHHHHHHhCCCCEEEEecccCCCC
Confidence 4788999999999999999987765543
No 149
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=33.46 E-value=19 Score=28.20 Aligned_cols=47 Identities=13% Similarity=-0.042 Sum_probs=30.8
Q ss_pred HHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++-++++||.-|-+...-|. +..... ..-+...|+++.++|++.|||
T Consensus 116 ve~a~~~GADAVk~lv~~g~-------d~~~e~----~~~q~~~l~rv~~ec~~~GiP 162 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDV-------DGDPQV----NVQKQAYIERIGSECQAEDIP 162 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECT-------TSCHHH----HHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEEEEEcCC-------CchHHH----HHHHHHHHHHHHHHHHHcCCc
Confidence 66778888888877665432 211000 001346899999999999998
No 150
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=33.05 E-value=27 Score=22.35 Aligned_cols=51 Identities=10% Similarity=-0.079 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
..++++.+++.|.+.++.|.+....+ . -....-..+.+.++.+.++++|++
T Consensus 29 ~~~~l~~l~~~Gi~~~iaTGR~~~~~-------n----G~~~~~~~~~~~~i~~~~~~~~~~ 79 (126)
T 1xpj_A 29 VIEQLREYHQLGFEIVISTARNMRTY-------E----GNVGKINIHTLPIITEWLDKHQVP 79 (126)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTTTTT-------T----TCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCeEEEEeCCChhhc-------c----ccccccCHHHHHHHHHHHHHcCCC
Confidence 35678888899999999998876531 1 000011356688899999998875
No 151
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=32.94 E-value=1.2e+02 Score=23.00 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=31.9
Q ss_pred HHHHHHH-----HHcCCCeEEEeeeecCCcccCCCCCC---CCcccccCCCCC--chHHHHHHHHhhcCCC
Q psy1381 39 NHWADIL-----ASSGAKYVVLTSKHHEGYTLWPSKYA---FSWNSMDIGPKR--DLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~-----k~aGakyvvlTtKHHdGF~lW~S~~~---~~~~s~~~~p~r--Div~el~~a~~~~Gl~ 99 (102)
.+-++.+ +++|.+|++| | +-|..... .+|. ..|.| +=+++|++.+++.||-
T Consensus 29 ~~~ad~~~~~gl~~~G~~~v~i-----D--dgW~~~~rd~~G~~~---~~~~~FP~Gl~~l~~~ih~~Glk 89 (362)
T 1uas_A 29 RETADALVNTGLAKLGYQYVNI-----D--DCWAEYSRDSQGNFV---PNRQTFPSGIKALADYVHAKGLK 89 (362)
T ss_dssp HHHHHHHHHTSHHHHTCCEEEC-----C--SSCBCSSCCTTSCCC---BCTTTCTTCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCchhcCCcEEEE-----C--CCcCCCCCCCCCCee---EChhccCccHHHHHHHHHHCCCE
Confidence 4566777 8889999998 4 45554221 1221 11111 1289999999999983
No 152
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=32.85 E-value=38 Score=26.08 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=32.8
Q ss_pred HHHHHHcCCCeEEEeeeecCCccc--CCCCCCCCcccccCCC----CCchHHHHHHHHhhc
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYTL--WPSKYAFSWNSMDIGP----KRDLVDYTFGNWFTG 96 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~l--W~S~~~~~~~s~~~~p----~rDiv~el~~a~~~~ 96 (102)
|+.+++||+..|=|-.-| ||.| +=|..++. .+...|. +-.++.|+++++|+.
T Consensus 149 A~~a~~aGfDgVEih~ah--GYLl~qFlsp~~N~-R~D~yGGslenR~rf~~eiv~aVr~a 206 (343)
T 3kru_A 149 AKRANLAGYDVVEIHAAH--GYLIHEFLSPLSNK-RKDEYGNSIENRARFLIEVIDEVRKN 206 (343)
T ss_dssp HHHHHHHTCSEEEEEECT--TSHHHHHHCTTTCC-CCSTTSSSHHHHTHHHHHHHHHHHHT
T ss_pred HhhccccCCceEEEeccc--chhHHHhhcccccc-cchhhccchHhHHHHHHHHHHHHHhc
Confidence 445678999999988766 6654 33333311 1112332 347889999999886
No 153
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=32.69 E-value=83 Score=22.59 Aligned_cols=44 Identities=16% Similarity=0.091 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+-++.++++|++-|=+.- +.|. .|... ..+.+.++++.|+++||
T Consensus 36 ~~~~~lk~~G~N~VRi~~--~~~~-~w~~~------------~~~~ld~~v~~a~~~Gi 79 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVL--SNGV-RWSKN------------GPSDVANVISLCKQNRL 79 (302)
T ss_dssp THHHHHHHTTCSEEEEEE--CCSS-SSCCC------------CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEEc--cCCc-ccCCC------------CHHHHHHHHHHHHHCCC
Confidence 557788999999987642 2221 23221 24679999999999998
No 154
>2noc_A Putative periplasmic protein; GFT STR106, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella choleraesuis} SCOP: d.230.6.1
Probab=32.69 E-value=35 Score=22.22 Aligned_cols=22 Identities=32% Similarity=0.315 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeec
Q psy1381 39 NHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH 60 (102)
++.++.+.++||+|.++|.-.-
T Consensus 56 ~~La~kAd~~GA~~Y~Iis~~~ 77 (99)
T 2noc_A 56 EDLIKKADEKGADVVVLTSGQT 77 (99)
T ss_dssp HHHHHHHHHTCCSEEECCSCCS
T ss_pred HHHHHHHHHcCCCEEEEEEEcC
Confidence 6788899999999999988663
No 155
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=32.63 E-value=34 Score=26.53 Aligned_cols=53 Identities=17% Similarity=0.070 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCeEEEeeeec---CCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHH---EGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHH---dGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
-++-+++.|+..|-|+-=.. +|| ..+ +|..++..- ..+=+++|+++|+++||-
T Consensus 41 ~Ldyl~~LGv~~i~l~Pi~~~~~~~y-----~~~-dy~~idp~~Gt~~d~~~lv~~ah~~Gi~ 97 (424)
T 2dh2_A 41 RLDYLSSLKVKGLVLGPIHKNQKDDV-----AQT-DLLQIDPNFGSKEDFDSLLQSAKKKSIR 97 (424)
T ss_dssp THHHHHHTTCSEEEECCCEEECTTCS-----TTE-EEEEECGGGCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCCC-----Ccc-cccccCccCCCHHHHHHHHHHHHHCCCE
Confidence 36788999999999985332 122 123 333333221 357789999999999983
No 156
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=32.50 E-value=1.2e+02 Score=22.16 Aligned_cols=58 Identities=17% Similarity=0.090 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC------CCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP------KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p------~rDiv~el~~a~~~~Gl 98 (102)
-++-+++++++|++.|=+.... + .+-+......++.....| ..+.+.++++.|+++||
T Consensus 46 ~~~~~~~~~~~G~n~vRi~~~~-~--~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi 109 (358)
T 1ece_A 46 YRSMLDQIKSLGYNTIRLPYSD-D--ILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGL 109 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEG-G--GGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEeeccH-H--HhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCC
Confidence 4788999999999998765331 1 111211111111110111 35778999999999998
No 157
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=32.44 E-value=39 Score=30.19 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=23.9
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEee
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlTt 57 (102)
+|++++| ||++.++.+++.|+|+++.+-
T Consensus 483 twD~~rFPdp~~mv~~Lh~~G~k~vl~V~ 511 (1020)
T 2xvl_A 483 DFDKQFFPDPKALVDKVHAMNAQIMISVW 511 (1020)
T ss_dssp CCCTTTCSCHHHHHHHHHHTTCEEEEEEC
T ss_pred EEChhhCCCHHHHHHHHHHCCCEEEEEEC
Confidence 5677777 799999999999999998653
No 158
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=32.23 E-value=23 Score=24.24 Aligned_cols=24 Identities=4% Similarity=0.003 Sum_probs=20.5
Q ss_pred ccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 77 MDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 77 ~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
....|+.||+..|.+.|+++|+..
T Consensus 23 lrL~~Gedl~~~i~~~~~~~gi~~ 46 (154)
T 2hx0_A 23 LRLLPGQEVFSQLHAFVQQNQLRA 46 (154)
T ss_dssp EEECTTCBHHHHHHHHHHHHTCSS
T ss_pred EEECCCCcHHHHHHHHHHHhCCCE
Confidence 356789999999999999999853
No 159
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=32.13 E-value=39 Score=29.63 Aligned_cols=29 Identities=21% Similarity=0.421 Sum_probs=23.7
Q ss_pred cCCCCCC-CHHHHHHHHHHcCCCeEEEeee
Q psy1381 30 DFTAEFF-DANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 30 ~F~p~~f-Dp~~Wa~l~k~aGakyvvlTtK 58 (102)
+|++++| ||++.++.+++.|+|+++.+-=
T Consensus 366 t~D~~~FPdp~~mv~~Lh~~G~k~vl~idP 395 (898)
T 3lpp_A 366 TYDQVAFNGLPQFVQDLHDHGQKYVIILDP 395 (898)
T ss_dssp CCCTTTTTTHHHHHHHHHHTTCEEEEEECS
T ss_pred eEChhhCCCHHHHHHHHHHCCCEEEEEeCC
Confidence 3466655 7999999999999999998643
No 160
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=32.12 E-value=65 Score=24.06 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+..+..++.++++|+..+++. +.. + +=..++.++|+++||.
T Consensus 112 ~g~~~f~~~~~~aGvdGvIip------------Dlp---------~--ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIA------------DVP---------T--NESQPFVAAAEKFGIQ 152 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEET------------TSC---------G--GGCHHHHHHHHHTTCE
T ss_pred HhHHHHHHHHHHCCCCEEEEC------------CCC---------H--HHHHHHHHHHHHcCCe
Confidence 455999999999999998882 111 1 2267889999999874
No 161
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=32.11 E-value=21 Score=24.27 Aligned_cols=24 Identities=13% Similarity=0.052 Sum_probs=20.6
Q ss_pred ccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 77 MDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 77 ~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
....|+.||+..|.+.|+++|+..
T Consensus 20 lrl~~Gedl~~~l~~~~~~~~i~~ 43 (149)
T 3htn_A 20 VSINNHTEIVKALNAFCKEKGILS 43 (149)
T ss_dssp EEECTTCBHHHHHHHHHHHHTCCS
T ss_pred EEECCCChHHHHHHHHHHHcCCcE
Confidence 356789999999999999999863
No 162
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=31.81 E-value=44 Score=27.92 Aligned_cols=59 Identities=10% Similarity=0.060 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCc-----c----cCCCCCCCCcccccC--C--C-----CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGY-----T----LWPSKYAFSWNSMDI--G--P-----KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF-----~----lW~S~~~~~~~s~~~--~--p-----~rDiv~el~~a~~~~Gl~ 99 (102)
+.++-++++|...|-|+-=+.-+- . -|--... +|..+.. + | ..+=+++|+++|+++||-
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~-dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~ 331 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPL-HFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLR 331 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEE-EEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCcc-CCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCE
Confidence 367889999999999986552110 0 1211111 2322221 1 1 137789999999999983
No 163
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=31.78 E-value=24 Score=28.86 Aligned_cols=53 Identities=11% Similarity=-0.019 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcc-----cccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWN-----SMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~-----s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
+-++-+++.|+..|-|+-= +++.....|. .++..- ..+=+++|+++|+++||-
T Consensus 243 ~kLdYLk~LGvt~I~L~Pi-------f~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~ 301 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPI-------FSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIK 301 (645)
T ss_dssp HTHHHHHHHTCCEEEECCC-------EEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCE
T ss_pred HhhHHHHHcCCCEEEECCC-------CCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCE
Confidence 4467899999999999854 2222221222 222211 356789999999999983
No 164
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=31.77 E-value=78 Score=23.79 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=35.4
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCC-C-CCchHH-------HHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIG-P-KRDLVD-------YTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~-p-~rDiv~-------el~~a~~~~Gl~ 99 (102)
.-+...+|| +.++++++.|+.+|++.. .|-+ . ++... | ..|++. +.++.|.++|++
T Consensus 106 dvsg~~~d~-~m~~~~a~~~~~vVlmh~---~G~p-----~-----tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 106 DVSGGRADP-AMGPLLAEADVPWVLMHW---RAVS-----A-----DTPHVPVRYGNVVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp ETTTTSSCT-THHHHHHHHTCCEEEECC---CCSC-----T-----TCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCCCH-HHHHHHHHhCCeEEEEcC---CCCC-----c-----chhhcCcchhHHHHHHHHHHHHHHHHHHHcCCC
Confidence 334555675 679999999999888854 3421 1 11111 1 245554 568889999997
No 165
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=31.75 E-value=34 Score=24.26 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
..||.++++.+.++|+..+.++....+|
T Consensus 29 ~~~~~~~a~~~~~~Ga~~i~v~d~~~~~ 56 (266)
T 2w6r_A 29 GILLRDWVVEVEKRGAGEILLTSIDRDG 56 (266)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTSS
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCccc
Confidence 4589999999999999999998765543
No 166
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=31.65 E-value=57 Score=24.57 Aligned_cols=44 Identities=18% Similarity=0.084 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+-.+++++.|++.+-+ -+|-...... ..-+=+.++++.|+++||
T Consensus 31 ~~~~ilk~~G~n~vRl--------ri~v~P~~g~-------~d~~~~~~~~~~ak~~Gl 74 (334)
T 1fob_A 31 ALETILADAGINSIRQ--------RVWVNPSDGS-------YDLDYNLELAKRVKAAGM 74 (334)
T ss_dssp CHHHHHHHHTCCEEEE--------EECSCCTTCT-------TCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHcCCCEEEE--------EEEECCCCCc-------cCHHHHHHHHHHHHHCCC
Confidence 4589999999999998 3352111101 124567788999999997
No 167
>2rnn_A E3 SUMO-protein ligase SIZ1; SUMO ligase, DNA binding, sumoylation, metal-binding, nucLeu phosphoprotein, UBL conjugation pathway; NMR {Saccharomyces cerevisiae}
Probab=31.54 E-value=25 Score=23.72 Aligned_cols=17 Identities=12% Similarity=-0.316 Sum_probs=14.7
Q ss_pred chHHHHHHHHhhcCCCC
Q psy1381 84 DLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 84 Div~el~~a~~~~Gl~~ 100 (102)
=-|.||.+-||+.||+-
T Consensus 40 LtVaELK~~cr~~GL~~ 56 (114)
T 2rnn_A 40 LKVSELKDICRSVSFPV 56 (114)
T ss_dssp CCHHHHHHHHHHTTCCT
T ss_pred hhHHHHHHHHHHcCCCc
Confidence 35789999999999985
No 168
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=30.85 E-value=42 Score=24.88 Aligned_cols=24 Identities=4% Similarity=-0.168 Sum_probs=21.1
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeee
Q psy1381 35 FFDANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtK 58 (102)
...+++.++.|++.|.+++++|--
T Consensus 17 ~~~~~e~~~~A~~~G~~~i~~TdH 40 (283)
T 3dcp_A 17 HDDVEEMVLKAIELDFDEYSIVEH 40 (283)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEecC
Confidence 467899999999999999998853
No 169
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=30.74 E-value=58 Score=23.52 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=23.3
Q ss_pred CCCC-CCCHHHHHHHHHHcCCCeEEEee
Q psy1381 31 FTAE-FFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 31 F~p~-~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
+.|. .+++++..+.++++|...+|++.
T Consensus 47 ~~p~~~~~~e~~l~~~~~~GV~~~V~v~ 74 (294)
T 4i6k_A 47 YAPDYEATVQSFISHLDEHNFTHGVLVQ 74 (294)
T ss_dssp CCCCSCBCHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCeEEEec
Confidence 3454 68999999999999999999984
No 170
>2jna_A Putative secreted protein; GFT-homodimer, PSI-2, alpha+beta, putative secreted Pro structural genomics, protein structure initiative; NMR {Salmonella typhimurium} SCOP: d.230.6.1
Probab=30.72 E-value=51 Score=21.62 Aligned_cols=22 Identities=14% Similarity=0.395 Sum_probs=18.9
Q ss_pred HHHHHHHHHcCCCeEEEeeeec
Q psy1381 39 NHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH 60 (102)
++.++.+.+.||+|.++|.-+-
T Consensus 58 ~~La~kAd~~GA~yY~Iis~~~ 79 (104)
T 2jna_A 58 EKLSELADAKGGKYYHIIAARE 79 (104)
T ss_dssp HHHHHHHHHHTCSEEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEEc
Confidence 6788899999999988888764
No 171
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=30.45 E-value=44 Score=25.30 Aligned_cols=36 Identities=17% Similarity=0.447 Sum_probs=26.1
Q ss_pred CCCCHHHHHHHHH---HcCCCeEEEeee-ecCCcccCCCC
Q psy1381 34 EFFDANHWADILA---SSGAKYVVLTSK-HHEGYTLWPSK 69 (102)
Q Consensus 34 ~~fDp~~Wa~l~k---~aGakyvvlTtK-HHdGF~lW~S~ 69 (102)
..++|++|+++++ +|||.+||+=++ --.|.=+++..
T Consensus 143 ~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~ 182 (251)
T 1qwg_A 143 KQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKE 182 (251)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTT
T ss_pred CCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCC
Confidence 6799999999875 799999999875 22333344444
No 172
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=30.37 E-value=72 Score=23.53 Aligned_cols=56 Identities=5% Similarity=-0.161 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.-++-+++++++|++.|=+-. +.+| .|..-...+ ....+ ..+.+..+++.|+++||
T Consensus 43 ~~~~dl~~~k~~G~N~vR~~~-~~~~--~w~~~~~~~---g~~~~~~~~~ld~~i~~a~~~Gi 99 (373)
T 1rh9_A 43 KVTNTFQQASKYKMNVARTWA-FSHG--GSRPLQSAP---GVYNEQMFQGLDFVISEAKKYGI 99 (373)
T ss_dssp HHHHHHHHHHHTTCCEEEEES-SCSS--SSSCSEEET---TEECHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCEEEECe-ecCC--CCccccCCC---CccCHHHHHHHHHHHHHHHHCCC
Confidence 346677899999999886621 1122 242111000 00000 24678889999999998
No 173
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=30.17 E-value=53 Score=23.10 Aligned_cols=27 Identities=11% Similarity=-0.066 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
+-..+|++-+++++++++|.+|++ |.+
T Consensus 185 ~~h~~~~ea~~~~~~l~~k~vip~--H~~ 211 (235)
T 3kl7_A 185 PYTMTVSQAAKAARMFSPKILYPY--HYG 211 (235)
T ss_dssp TTSCCHHHHHHHHHHHCCSEEEEE--SCT
T ss_pred CcccCHHHHHHHHHHcCCCEEEEE--cCC
Confidence 446799999999999999998876 544
No 174
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=30.08 E-value=34 Score=21.47 Aligned_cols=19 Identities=11% Similarity=-0.230 Sum_probs=15.9
Q ss_pred CchHHHHHHHHhhcCCCCC
Q psy1381 83 RDLVDYTFGNWFTGGSPGK 101 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl~~~ 101 (102)
.=-|.||-+.|+++||+-+
T Consensus 28 klkVaeLK~eLk~RGL~~s 46 (75)
T 2kvu_A 28 DMKVAELKQELKLRSLPVS 46 (75)
T ss_dssp TSCHHHHHHHHHHTTCCCC
T ss_pred HCcHHHHHHHHHHcCCCCC
Confidence 3458999999999999854
No 175
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=29.94 E-value=51 Score=25.29 Aligned_cols=41 Identities=7% Similarity=-0.135 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
+=++.+.++++.|+.+|++..+ + .++++++++.|.++|++.
T Consensus 161 ~~~~~~~~aa~~g~~vv~m~~~--------------d---------v~~l~~~~~~a~~~Gi~~ 201 (310)
T 2h9a_B 161 NYKPIVATCMVHGHSVVASAPL--------------D---------INLSKQLNIMIMEMNLAP 201 (310)
T ss_dssp THHHHHHHHHHHTCEEEEECSS--------------C---------HHHHHHHHHHHHTTTCCG
T ss_pred ccHHHHHHHHHhCCCEEEEChh--------------H---------HHHHHHHHHHHHHCCCCh
Confidence 4468899999999998886532 1 278999999999999974
No 176
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=29.88 E-value=56 Score=24.83 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=23.8
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCeEEEee
Q psy1381 30 DFTAEFFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 30 ~F~p~~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
.|+-....|++.++.|++.|.+.+.||=
T Consensus 22 ~~SDG~~~~~elv~~A~~~Gl~~iaiTD 49 (301)
T 3o0f_A 22 VFSDGTETPRTLVEQARKLGLHGVAIAD 49 (301)
T ss_dssp TTTTCSSCHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 3444578999999999999999999885
No 177
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=29.86 E-value=81 Score=23.03 Aligned_cols=57 Identities=11% Similarity=-0.103 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.+-.++-+++++++|++.|=|..- ...|..... ++. .. ....+.+.++++.|+++||
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~----~~~~~~~~~-p~~-~~-~~~~~~ld~~v~~a~~~Gi 91 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMC----HLLWSDRGN-PFI-IR-EDFFEKIDRVIFWGEKYGI 91 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEE----GGGTSCSSC-TTC-CC-GGGHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCC----HHHhcCCCC-CCc-CC-HHHHHHHHHHHHHHHHcCC
Confidence 345577888999999999977542 111221111 110 00 1145788999999999998
No 178
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=29.83 E-value=78 Score=26.26 Aligned_cols=50 Identities=10% Similarity=0.041 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCC-CchHHHHHHHHhhcCCC
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPK-RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~-rDiv~el~~a~~~~Gl~ 99 (102)
-..|+++..+++++-|++-++++.-. .+ .| +|. -|=++++++-|+++|+|
T Consensus 198 ~~id~e~le~aI~e~ga~~i~~V~~T----------tt-~y-----~p~~~ddI~eIaeIch~~gIp 248 (501)
T 3hl2_A 198 LRTDLKAVEAKVQELGPDCILCIHST----------TS-CF-----APRVPDRLEELAVICANYDIP 248 (501)
T ss_dssp EEECHHHHHHHHHHHCGGGEEEEEEE----------CS-CC-----TTBCCCCHHHHHHHHHHHTCC
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEEec----------CC-CC-----CCcccccHHHHHHHHHHcCCe
Confidence 46789999999999776555444321 11 11 332 47899999999999998
No 179
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=29.75 E-value=77 Score=23.03 Aligned_cols=39 Identities=5% Similarity=-0.046 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.+++.++++|+..+++. | .. .+=+.++++.|+++|+.
T Consensus 111 ~~~~~~~~~~aGadgii~~----d--------~~-----------~e~~~~~~~~~~~~g~~ 149 (268)
T 1qop_A 111 IDAFYARCEQVGVDSVLVA----D--------VP-----------VEESAPFRQAALRHNIA 149 (268)
T ss_dssp HHHHHHHHHHHTCCEEEET----T--------CC-----------GGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEEc----C--------CC-----------HHHHHHHHHHHHHcCCc
Confidence 3899999999999988772 1 11 02356778888888863
No 180
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=29.66 E-value=43 Score=22.64 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCC
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHHEGYTLWPS 68 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S 68 (102)
..+.+++|.+++++||++-+-+..+... |++|-.
T Consensus 190 ~~~~~~~~~~ll~~aGF~~v~~~~~~~~-~~~~~~ 223 (234)
T 3dtn_A 190 KDIEMNQQLNWLKEAGFRDVSCIYKYYQ-FAVMFG 223 (234)
T ss_dssp CCCBHHHHHHHHHHTTCEEEEEEEEETT-EEEEEE
T ss_pred cccCHHHHHHHHHHcCCCceeeeeeecc-eeEEEE
Confidence 4678999999999999998876665553 555543
No 181
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=29.61 E-value=85 Score=22.68 Aligned_cols=45 Identities=13% Similarity=-0.113 Sum_probs=33.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGG 97 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~G 97 (102)
..+.-|++++.+++++.|+..||.++-. . ..+....|+++|+++|
T Consensus 66 ~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~----~-----------------n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 66 YGLINEQEAMEKILKEHEIDIVVSTVGG----E-----------------SILDQIALVKAMKAVG 110 (346)
T ss_dssp ECCTTCHHHHHHHHHHTTCCEEEECCCG----G-----------------GGGGHHHHHHHHHHHC
T ss_pred EeecCCHHHHHHHHhhCCCCEEEECCch----h-----------------hHHHHHHHHHHHHHcC
Confidence 4455689999999998899988876632 1 2334578888888888
No 182
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=29.39 E-value=51 Score=27.04 Aligned_cols=61 Identities=13% Similarity=0.126 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--C-----CcccCCCCCCCCcc---cccCC-CCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--E-----GYTLWPSKYAFSWN---SMDIG-PKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--d-----GF~lW~S~~~~~~~---s~~~~-p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++-++++|+..|-|+-=+. . |+...+-..-..++ +++.. ...+=+++|+++|+++||-
T Consensus 153 ~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~ 224 (599)
T 3bc9_A 153 AERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIK 224 (599)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCE
Confidence 4456788999999999885443 2 22211111000000 12211 1357789999999999983
No 183
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=29.35 E-value=25 Score=25.68 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=13.7
Q ss_pred HHHHHHHHHcCCCeEE
Q psy1381 39 NHWADILASSGAKYVV 54 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvv 54 (102)
++.++++++.|+++++
T Consensus 112 ~~~i~~A~~lG~~~v~ 127 (335)
T 2qw5_A 112 KSRVDITAALGGEIMM 127 (335)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEe
Confidence 4778899999999983
No 184
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=29.29 E-value=47 Score=23.31 Aligned_cols=24 Identities=13% Similarity=-0.014 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCCeEEEee-eecC
Q psy1381 38 ANHWADILASSGAKYVVLTS-KHHE 61 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTt-KHHd 61 (102)
|=+-|..+|+.|++.+++|. +|-+
T Consensus 93 ~ie~A~~ake~G~~vIaITs~~~~~ 117 (170)
T 3jx9_A 93 LLASLARYDAWHTPYSIITLGDVTE 117 (170)
T ss_dssp HHHHHHHHHHHTCCEEEEESSCCCT
T ss_pred HHHHHHHHHHCCCcEEEEeCcchhc
Confidence 47889999999999999999 6554
No 185
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=29.22 E-value=1.8e+02 Score=24.57 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCC-------CCCCcccccCCCCC--chHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSK-------YAFSWNSMDIGPKR--DLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~-------~~~~~~s~~~~p~r--Div~el~~a~~~~Gl 98 (102)
.+.++.+++.|..|+|| | +-|... .. +|. ..|.+ |=++.|++.+++.||
T Consensus 353 ~~~ad~~~~~G~~~~vi-----D--DGW~~~r~~~~~~~G-d~~---~d~~kFP~Glk~lv~~ih~~Gl 410 (732)
T 2xn2_A 353 KTIVDKAKKLGLEMFVL-----D--DGWFGHRDDDNSSLG-DWK---VYKKKFPNGLGHFADYVHEQGL 410 (732)
T ss_dssp HHHHHHHHHTTCCEEEE-----C--SSSBTTCSSTTSCTT-CCS---BCTTTCTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCcEEEE-----c--CcccccCCCCccccC-cee---eCchhcCccHHHHHHHHHHcCC
Confidence 45778889999999998 3 334322 22 231 11111 238999999999997
No 186
>1sed_A APC1180, hypothetical protein YHAI; structural genomics, four helix colied-coil, PSI, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.219.1.1
Probab=29.18 E-value=27 Score=23.76 Aligned_cols=73 Identities=12% Similarity=0.140 Sum_probs=46.2
Q ss_pred CCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 21 GFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 21 ~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
++.|-.+.=..+.++-+.++..+++.+..-+|. ..--+||.+++.=.. .+ .....++-| |.|.++||+++||-
T Consensus 28 k~pFy~lII~~~Ltk~eve~il~lce~L~~el~---~QKaeGfv~F~~Ll~-~F-ag~L~~~L~-v~eti~Al~~Qgl~ 100 (117)
T 1sed_A 28 RYPFYALLIDKGLSKEEGEAVMRICDELSEELA---TQKAQGFVTFDKLLA-LF-AGQLNEKLD-VHETIFALYEQGLY 100 (117)
T ss_dssp TCHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HHHHTTCCCCHHHHH-HH-HHHSCTTSC-HHHHHHHHHHTTCS
T ss_pred cCCHHHHHHHccCcHHHHHHHHHHHHHHHHHHH---HHHhcchhhHHHHHH-HH-HhhccccCC-HHHHHHHHHHccCc
Confidence 344555555666777777888888777655542 344578888876543 11 112233333 78999999999983
No 187
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=29.13 E-value=1.2e+02 Score=21.99 Aligned_cols=45 Identities=4% Similarity=-0.091 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+|+++..+++.+-+.+-++++. ++.| ...-+.+|.+.|+++|+.
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~-~~~~-------------------~~~~l~~i~~l~~~~~~~ 202 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGF-SAYP-------------------RKLDFARFRAIADSVGAK 202 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEEC-SCCC-------------------SCCCHHHHHHHHHHHTCE
T ss_pred ccCHHHHHHHHhhcCCcEEEEcc-ccCC-------------------CcCCHHHHHHHHHHcCCE
Confidence 57999999999877777766652 2222 112247999999999874
No 188
>2ofk_A 3-methyladenine DNA glycosylase I, constitutive; DNA repair, base excision, helix-hairpin-helix, hydrolase; HET: PGE; 1.50A {Salmonella typhi} PDB: 2ofi_A* 1lmz_A 1nku_A 1p7m_A*
Probab=28.72 E-value=19 Score=26.04 Aligned_cols=94 Identities=12% Similarity=0.173 Sum_probs=60.9
Q ss_pred CChHHHHHHHHhCCC-----------------------------CCChHHhhccCCCC---CCCHHHHHHHHHHcCC---
Q psy1381 6 PNSTVTKFMERNYKP-----------------------------GFTYQDFAKDFTAE---FFDANHWADILASSGA--- 50 (102)
Q Consensus 6 ~~~~y~~~~~~~~~~-----------------------------~~~Y~~~a~~F~p~---~fDp~~Wa~l~k~aGa--- 50 (102)
.++.|.+||-+..|- +..|.+....|+|+ .|+.+++.+|+.+.|.
T Consensus 9 ~~ply~~YHD~EWG~P~~Dd~~LFE~L~Le~fQAGLSW~tIL~KRe~fr~AF~~Fd~~~VA~~~e~~ve~Ll~d~~IIRn 88 (183)
T 2ofk_A 9 QDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRH 88 (183)
T ss_dssp SCHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHTTTSCHHHHHHTHHHHHHHTGGGCHHHHHTCCHHHHHHHTTCTTSCCC
T ss_pred CChHHHHHHHhccCCcccCcHHHHHHHHHHHHhccCCHHHHHHhHHHHHHHHcCCCHHHHcCCCHHHHHHHhcCCcchhh
Confidence 477889999888862 12344555688885 8999999999988885
Q ss_pred -----------CeEEEeeeecCCcc--cCCC---CC-CCCccccc-CCCCCchHHHHHHHHhhcCCC
Q psy1381 51 -----------KYVVLTSKHHEGYT--LWPS---KY-AFSWNSMD-IGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 51 -----------kyvvlTtKHHdGF~--lW~S---~~-~~~~~s~~-~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++=..+-+.+|. +|.= +. ...|.+.. .+..-.+-..|++..+|+|.-
T Consensus 89 r~KI~A~i~NA~~~l~i~~e~Gsf~~ylW~fv~~~pi~~~~~~~~~vp~~t~~S~~lsk~LKkrGfk 155 (183)
T 2ofk_A 89 RGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFK 155 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTTTSCEECCCSSGGGSCSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHhhcCCCCCccCCccchhhccCCCHHHHHHHHHHHhCCCe
Confidence 33333445567776 4532 22 12333333 333667778899999999863
No 189
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=28.53 E-value=91 Score=21.03 Aligned_cols=48 Identities=10% Similarity=0.019 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
-...-.|++.++.+++.++..|++.+-- ++..+.+.++++.+|+.|++
T Consensus 52 lG~~~p~e~lv~aa~~~~~diV~lS~~~--------------------~~~~~~~~~~i~~L~~~g~~ 99 (161)
T 2yxb_A 52 TGLRQTPEQVAMAAVQEDVDVIGVSILN--------------------GAHLHLMKRLMAKLRELGAD 99 (161)
T ss_dssp CCSBCCHHHHHHHHHHTTCSEEEEEESS--------------------SCHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCHHHHHHHHHhcCCCEEEEEeec--------------------hhhHHHHHHHHHHHHhcCCC
Confidence 3445688999999999999999886521 12356677788888877753
No 190
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=28.42 E-value=84 Score=23.91 Aligned_cols=55 Identities=22% Similarity=0.228 Sum_probs=34.5
Q ss_pred cCCCCCCCHHHHHHHHHHcCCCeEEEeeeecC-CcccCCCCCCCCcccccCCC-CCch-------HHHHHHHHhhcCCC
Q psy1381 30 DFTAEFFDANHWADILASSGAKYVVLTSKHHE-GYTLWPSKYAFSWNSMDIGP-KRDL-------VDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHd-GF~lW~S~~~~~~~s~~~~p-~rDi-------v~el~~a~~~~Gl~ 99 (102)
.-+.. .|| +.++++++.|+.+|++.. + |-+ . ++...| ..|+ +.+.++.|.++|++
T Consensus 129 dVsg~-~d~-~m~~v~a~~~~~vVlmh~---~eG~p-----~-----tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~ 192 (294)
T 2dqw_A 129 DVTGL-RDE-RMVALAARHGVAAVVMHM---PVPDP-----A-----TMMAHARYRDVVAEVKAFLEAQARRALSAGVP 192 (294)
T ss_dssp CSSCS-CCH-HHHHHHHHHTCEEEEECC---SSSCT-----T-----TGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ECCCC-CCh-HHHHHHHHhCCCEEEEcC---CCCCC-----c-----cccccCccccHHHHHHHHHHHHHHHHHHCCCC
Confidence 44455 665 779999999999888843 3 421 1 121111 2344 55568889999986
No 191
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=28.16 E-value=43 Score=23.84 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=22.8
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
.....+++-+++++++|+|.+||| |++
T Consensus 247 ~~H~t~~~a~~~a~~~~~~~lvl~--H~s 273 (306)
T 2cbn_A 247 RGHSSTRQAATLAREAGVGKLIIT--HVS 273 (306)
T ss_dssp TTCCBHHHHHHHHHHHTCSEEEEE--CBC
T ss_pred cCCCCHHHHHHHHHHcCCcEEEEE--eec
Confidence 346788999999999999999998 554
No 192
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=27.81 E-value=80 Score=23.01 Aligned_cols=51 Identities=10% Similarity=0.092 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+|+++..+++++...+-++++...|. || + . -...+-+.+|++.|+++|+.
T Consensus 148 ~~d~~~l~~~l~~~~~~~v~~~~~~~n-----pt--G------~-~~~~~~l~~l~~~~~~~~~~ 198 (397)
T 2zyj_A 148 GPDLDALEEVLKRERPRFLYLIPSFQN-----PT--G------G-LTPLPARKRLLQMVMERGLV 198 (397)
T ss_dssp EECHHHHHHHHHHCCCSCEEECCBSCT-----TT--C------C-BCCHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHhhcCCeEEEECCCCcC-----CC--C------C-cCCHHHHHHHHHHHHHcCCE
Confidence 367777777776544554333333222 11 1 0 11245678999999998864
No 193
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=27.81 E-value=39 Score=22.19 Aligned_cols=27 Identities=15% Similarity=0.283 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcc
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYT 64 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~ 64 (102)
|||.+-.+.+.++ .-||+.+|-..+||
T Consensus 1 f~p~~~~~~ii~~--~~Vvvysk~~Cp~C 27 (127)
T 3l4n_A 1 FNVQKEYSLILDL--SPIIIFSKSTCSYS 27 (127)
T ss_dssp CCHHHHHHHHHTS--CSEEEEECTTCHHH
T ss_pred CCHHHHHHHHHcc--CCEEEEEcCCCccH
Confidence 8998888776655 44888888888888
No 194
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=27.73 E-value=36 Score=26.80 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
..-.|-..+++....++|||.||+++--.|
T Consensus 101 sTG~f~s~e~a~~hl~aGAkkVVIsaps~d 130 (346)
T 3h9e_O 101 STGVYLSIQAASDHISAGAQRVVISAPSPD 130 (346)
T ss_dssp CSSSCCSHHHHHHHHHTTCSEEEESSCCSS
T ss_pred eccccCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 345666789999999999999999986543
No 195
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=27.12 E-value=59 Score=24.73 Aligned_cols=25 Identities=28% Similarity=0.183 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
...|++=+++++++|+|.+|+| |++
T Consensus 289 H~t~~~A~~~a~~~~~k~lil~--H~s 313 (368)
T 3zwf_A 289 HSTPQMAATFAKLCRAKRLVLT--HFS 313 (368)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEE--CBC
T ss_pred CCCHHHHHHHHHHcCCCEEEEE--eeC
Confidence 6788999999999999999987 544
No 196
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=27.05 E-value=48 Score=23.22 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
++.++++.+.++|+..+++|+...+|
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~ 172 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDG 172 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC----
T ss_pred CHHHHHHHHHhCCCCEEEEeccCccc
Confidence 88999999999999999999876654
No 197
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=26.89 E-value=58 Score=21.34 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=20.1
Q ss_pred CCCHHHHHHHHHHcCCCeEEEee
Q psy1381 35 FFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
.-.|++.++++++.++..+++.+
T Consensus 40 ~~p~e~~v~~a~~~~~d~v~lS~ 62 (137)
T 1ccw_A 40 LSPQELFIKAAIETKADAILVSS 62 (137)
T ss_dssp EECHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEe
Confidence 45689999999999999998865
No 198
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=26.85 E-value=55 Score=24.35 Aligned_cols=25 Identities=20% Similarity=0.326 Sum_probs=19.5
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeee
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtK 58 (102)
+.|||.+.|+.+.++||..+=+.|-
T Consensus 70 ~~~~p~~~A~~y~~~GA~~isvltd 94 (272)
T 3qja_A 70 TIADPAKLAQAYQDGGARIVSVVTE 94 (272)
T ss_dssp ---CHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCHHHHHHHHHHcCCCEEEEecC
Confidence 4699999999999999999876543
No 199
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=26.84 E-value=1.5e+02 Score=21.38 Aligned_cols=47 Identities=11% Similarity=0.012 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+|+++..+++.+...+-++++.=|.- ++ ---| +.++++.|+++|+.
T Consensus 122 ~~d~~~l~~~i~~~~~~~v~~~~~~np--------tG---------~~~~-l~~i~~l~~~~~~~ 168 (416)
T 3isl_A 122 VFDPEDIIREIKKVKPKIVAMVHGETS--------TG---------RIHP-LKAIGEACRTEDAL 168 (416)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETT--------TT---------EECC-CHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHhhCCCcEEEEEccCCC--------Cc---------eecC-HHHHHHHHHHcCCE
Confidence 457888877777556666666542210 11 0112 77899999999863
No 200
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=26.59 E-value=1e+02 Score=23.45 Aligned_cols=57 Identities=7% Similarity=-0.011 Sum_probs=35.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 31 FTAEFFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 31 F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
-+...+|| +.++++++.|+-+|++.. .|-+- +. + . .....+.+.+.++.|.++|++.
T Consensus 142 vsg~~~d~-~m~~~aa~~g~~vVlmh~---~G~p~----y~-d--~--v~ev~~~l~~~i~~a~~~GI~~ 198 (297)
T 1tx2_A 142 IWGAKAEP-KIAEVAAHYDVPIILMHN---RDNMN----YR-N--L--MADMIADLYDSIKIAKDAGVRD 198 (297)
T ss_dssp TTTTSSCT-HHHHHHHHHTCCEEEECC---CSCCC----CS-S--H--HHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCCCCCCH-HHHHHHHHhCCcEEEEeC---CCCCC----cc-h--H--HHHHHHHHHHHHHHHHHcCCCh
Confidence 34455565 678899999998888754 33211 11 0 0 0112466777888999999973
No 201
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=26.50 E-value=1.6e+02 Score=21.14 Aligned_cols=21 Identities=19% Similarity=0.146 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHcCCCeEEEee
Q psy1381 37 DANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTt 57 (102)
+.++-++.++++|.+.|=|..
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~ 57 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFG 57 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECC
T ss_pred CHHHHHHHHHHcCCCEEEecc
Confidence 556666666666666666654
No 202
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=26.29 E-value=54 Score=26.06 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCC--CcccccCCC-CCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAF--SWNSMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~--~~~s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.++-+++++++|++-|=|-.. |..-... ++ ...+ ..+.+.++++.|+++||
T Consensus 47 t~~di~~i~~~G~N~vRipi~-------w~~~~~~~~~~---~~~~~~l~~~d~vv~~a~~~Gi 100 (515)
T 3icg_A 47 THAMINKIKEAGFNTLRLPVT-------WDGHMGAAPEY---TIDQTWMKRVEEIANYAFDNDM 100 (515)
T ss_dssp CHHHHHHHHHHTCCEEEECCC-------CTTSBCCTTTC---CBCHHHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHCCCCEEEEccc-------hHHhCCCCCCC---ccCHHHHHHHHHHHHHHHHCCC
Confidence 378899999999998877332 3221110 11 0011 25889999999999998
No 203
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=26.20 E-value=25 Score=25.94 Aligned_cols=44 Identities=18% Similarity=0.062 Sum_probs=30.3
Q ss_pred CCCHH-HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHH
Q psy1381 35 FFDAN-HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNW 93 (102)
Q Consensus 35 ~fDp~-~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~ 93 (102)
.+|+. +|++.+.++ +..+++|....||.. .|+..++++++.+++
T Consensus 156 ~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~--------------~G~d~eli~~l~~~~ 200 (260)
T 2agk_A 156 DLELNADTFRELRKY-TNEFLIHAADVEGLC--------------GGIDELLVSKLFEWT 200 (260)
T ss_dssp EEEESHHHHHHHTTT-CSEEEEEC---------------------CCCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHh-cCEEEEEeeccccCc--------------CCCCHHHHHHHHHhh
Confidence 46888 999999999 999999988888742 344567788877766
No 204
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=26.15 E-value=90 Score=23.18 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHc-----CCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 36 FDANHWADILASS-----GAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 36 fDp~~Wa~l~k~a-----GakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+|+++..+++++. ..+-|+++.=|. ||-.. ...+-+.+|++.|+++|+
T Consensus 173 ~d~~~l~~~l~~~~~~~~~~~~v~i~~p~n------ptG~~---------~~~~~l~~l~~~~~~~~~ 225 (435)
T 3piu_A 173 ITETALEEAYQEAEKRNLRVKGVLVTNPSN------PLGTT---------MTRNELYLLLSFVEDKGI 225 (435)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEEESSCT------TTCCC---------CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEEcCCCC------CCCCC---------CCHHHHHHHHHHHHHcCC
Confidence 6899998888773 444555554332 11111 124458999999999886
No 205
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=26.12 E-value=48 Score=23.09 Aligned_cols=26 Identities=27% Similarity=0.311 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEG 62 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdG 62 (102)
++.++++.+.++|+..+++|+..-+|
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~ 175 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDG 175 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTT
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCcc
Confidence 78999999999999999999876654
No 206
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=26.08 E-value=55 Score=22.77 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHcCCCeEEEee
Q psy1381 37 DANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTt 57 (102)
||+..++.+.++|+.++.+-.
T Consensus 79 d~~~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 79 EPDQRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp SHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEe
Confidence 478899999999999997543
No 207
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=25.86 E-value=1.9e+02 Score=22.33 Aligned_cols=57 Identities=16% Similarity=0.085 Sum_probs=37.7
Q ss_pred cCCCCCC--CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 30 DFTAEFF--DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 30 ~F~p~~f--Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
..+|++| ..+..++-+++.|+|..|-+.- | ..+ ......-.|...+.++.+.+.|+.
T Consensus 66 ~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~p---g------~~t----c~~~pg~~~~~~~~~~~~~~wGvd 124 (397)
T 3a5v_A 66 LADPTKFPRGIKPLVDDIHNLGLKAGIYSSA---G------TLT----CGGHIASLGYEDIDAKTWAKWGID 124 (397)
T ss_dssp CBCTTTCTTCHHHHHHHHHHTTCEEEEEEES---S------SBC----TTSCBCCTTCHHHHHHHHHHHTCC
T ss_pred EEChhcCCcCHHHHHHHHHHcCCEEEEEecC---C------CCc----cCCCHHHHHHHHHHHHHHHHcCCC
Confidence 4577889 8999999999999998776541 1 111 111222356667777777777764
No 208
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=25.72 E-value=72 Score=24.91 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCeEEEeeeec-CCc--------ccCCCCCCCCcc---cccCCC-CCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHH-EGY--------TLWPSKYAFSWN---SMDIGP-KRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHH-dGF--------~lW~S~~~~~~~---s~~~~p-~rDiv~el~~a~~~~Gl 98 (102)
.++.++.++++|++-|=+- ++ ||- .+=+++-. |+ ....++ .-+-+..+++.|+++||
T Consensus 45 i~~~l~~~a~~G~N~VRv~--~f~d~~~~~~~~~~~lqp~~G~--yd~~~~~~~~~~~~~~LD~~i~~A~k~GI 114 (383)
T 3pzg_A 45 IDSVLESARDMGIKVLRIW--GFLDGESYCRDKNTYMHPEPGV--FGVPEGISNAQNGFERLDYTIAKAKELGI 114 (383)
T ss_dssp HHHHHHHHHHHTCCEEEEE--CCCBSHHHHHHHTEESBSBTTB--CSSCTTCSSCEEHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEe--ccccccccccccccccccCCCc--ccccccccchHHHHHHHHHHHHHHHHCCC
Confidence 4667899999999977552 22 332 12222211 22 112222 35778899999999998
No 209
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=25.65 E-value=94 Score=27.11 Aligned_cols=61 Identities=13% Similarity=0.086 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCeEEEeeee--cCCcccCCCCCCCCccccc---CC----C---CCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKH--HEGYTLWPSKYAFSWNSMD---IG----P---KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKH--HdGF~lW~S~~~~~~~s~~---~~----p---~rDiv~el~~a~~~~Gl~ 99 (102)
.+-++-++++|...|-|+--+ -.+=..+++.....|...+ .. | ..+=+++|+++|+++||-
T Consensus 636 ~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~ 708 (844)
T 3aie_A 636 AKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIK 708 (844)
T ss_dssp HHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 345778899999999887543 2221111111111111111 01 2 357789999999999983
No 210
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=25.50 E-value=28 Score=24.25 Aligned_cols=26 Identities=23% Similarity=0.463 Sum_probs=22.9
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCc
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGY 63 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF 63 (102)
.+..++.+++.|++=.|++.+|-.|-
T Consensus 122 ve~L~e~~~~~G~~v~ivs~~~eeG~ 147 (166)
T 3ir9_A 122 VDEFSELADKSNAKVVFVSTDFDEGS 147 (166)
T ss_dssp HHHHHHHHHHTTCEEEEECSCSHHHH
T ss_pred HHHHHHHHHhcCCEEEEECCCChhHH
Confidence 56899999999999999999997663
No 211
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=25.21 E-value=39 Score=26.29 Aligned_cols=26 Identities=27% Similarity=0.424 Sum_probs=21.8
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeee
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtK 58 (102)
.-.|-..+++....++|||.||+++-
T Consensus 99 tG~f~s~e~a~~h~~aGakkVviSap 124 (335)
T 1obf_O 99 TGFFTTKEKAGAHIKGGAKKVIISAP 124 (335)
T ss_dssp SSSCCSHHHHHHHHHHTCSEEEESSC
T ss_pred cCccccHHHHHHHHHcCCCEEEECCc
Confidence 34567799999999999999999753
No 212
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=25.12 E-value=1.2e+02 Score=21.56 Aligned_cols=45 Identities=11% Similarity=0.006 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeec-CCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHH-EGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHH-dGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.+|+++..+++++-..+-++++.-|- .|.. -| +.++.+-|+++|+
T Consensus 134 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~------------------~~-l~~i~~l~~~~~~ 179 (393)
T 3kgw_A 134 HYTLQEVEEGLAQHKPVLLFLVHGESSTGVV------------------QP-LDGFGELCHRYQC 179 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEE------------------CC-CTTHHHHHHHTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEeccCCcchhh------------------cc-HHHHHHHHHHcCC
Confidence 57888888888776777777665432 1210 01 5678888998886
No 213
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=25.05 E-value=42 Score=26.24 Aligned_cols=30 Identities=27% Similarity=0.281 Sum_probs=24.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
..-.|-..+++....++|||.||+++---|
T Consensus 96 sTG~f~s~e~a~~hl~aGAkkViIsaps~d 125 (332)
T 3pym_A 96 STGVFKELDTAQKHIDAGAKKVVITAPSST 125 (332)
T ss_dssp CSSSSCSHHHHHHHHHTTCSEEEESSCCSS
T ss_pred ecccccCHHHHHHHHHcCCCEEEECCCCCC
Confidence 344677799999999999999999886444
No 214
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=25.03 E-value=27 Score=24.68 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=17.1
Q ss_pred CCHHHHHHHHHHcCCCeEEEe
Q psy1381 36 FDANHWADILASSGAKYVVLT 56 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlT 56 (102)
-||+++++.+.++|+.++.+-
T Consensus 74 ~d~~~~i~~~~~agad~v~vH 94 (228)
T 1h1y_A 74 TNPSDYVEPLAKAGASGFTFH 94 (228)
T ss_dssp SCGGGGHHHHHHHTCSEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEC
Confidence 367888999999999988663
No 215
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=25.01 E-value=54 Score=21.12 Aligned_cols=25 Identities=8% Similarity=0.010 Sum_probs=19.9
Q ss_pred cccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 76 SMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 76 s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
.++.+|..=+..-|.++|++.|+..
T Consensus 23 ~VKvtp~t~L~~VL~eaC~K~gl~~ 47 (90)
T 2al3_A 23 TVKVTPSTVLLQVLEDTCRRQDFNP 47 (90)
T ss_dssp EECCCTTSBHHHHHHHHHHHTTCCG
T ss_pred EEEECCCCCHHHHHHHHHHHhCCCh
Confidence 5567777777777899999999963
No 216
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=24.84 E-value=72 Score=23.92 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.4
Q ss_pred CCCCHHHHHHHHHHcCCCeEEE
Q psy1381 34 EFFDANHWADILASSGAKYVVL 55 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvl 55 (102)
+.|||.+.|+.+.++||..+=+
T Consensus 77 ~~~dp~~~A~~y~~~GA~~IsV 98 (272)
T 3tsm_A 77 PDFDPPALAKAYEEGGAACLSV 98 (272)
T ss_dssp SSCCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHHCCCCEEEE
Confidence 3699999999999999998844
No 217
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=24.77 E-value=1e+02 Score=22.32 Aligned_cols=51 Identities=6% Similarity=-0.057 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
++.+.+..+++++|++-|=+-.-..+ . .|.. + ....+.|.++++.|.++||
T Consensus 44 ~~~~~~~~l~~~~G~N~VRip~~~~~---------~-~~~~-~-~~~~~~ld~~v~~a~~~Gi 94 (303)
T 7a3h_A 44 VNYESMKWLRDDWGINVFRAAMYTSS---------G-GYID-D-PSVKEKVKEAVEAAIDLDI 94 (303)
T ss_dssp CSHHHHHHHHHHTCCCEEEEEEESST---------T-STTT-C-TTHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCCCEEEEEEEeCC---------C-CccC-C-HHHHHHHHHHHHHHHHCCC
Confidence 45666666666788887755442211 1 1100 0 1135777788888888886
No 218
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=24.73 E-value=56 Score=27.01 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCCeEEEeee--ecCCcccCCCCCCCCcccccCC-CCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSK--HHEGYTLWPSKYAFSWNSMDIG-PKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtK--HHdGF~lW~S~~~~~~~s~~~~-p~rDiv~el~~a~~~~Gl 98 (102)
.+.++-++++|.+.|-|.-= +-.|-.-|--... +|..++.. ...+=+++|+++|+++||
T Consensus 114 ~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~-dy~~i~~~~Gt~~d~~~lv~~~h~~Gi 175 (655)
T 3ucq_A 114 EERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQ-DYRAVRPDLGTMDDLSALARALRGRGI 175 (655)
T ss_dssp HTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEE-EEEEECGGGCCHHHHHHHHHHHHHTTC
T ss_pred HHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCc-CcCccCccCCCHHHHHHHHHHHHHCCC
Confidence 45577899999999988742 2111111111111 23222211 134668999999999998
No 219
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=24.68 E-value=70 Score=23.25 Aligned_cols=38 Identities=3% Similarity=-0.035 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+..++.++++|+..+++. | .. .+=+.++++.|+++|+.
T Consensus 112 ~~f~~~~~~aG~dgvii~----d--------l~-----------~ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP----D--------LP-----------PEEAEELKAVMKKYVLS 149 (262)
T ss_dssp HHHHHHHHHTTCCEEECT----T--------CC-----------HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEEC----C--------CC-----------HHHHHHHHHHHHHcCCc
Confidence 899999999999877762 1 11 14477888888888864
No 220
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=24.66 E-value=62 Score=23.25 Aligned_cols=49 Identities=10% Similarity=0.019 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.|+++..+++++...+-++++.=|. .++ ..- ..+-+.++++.|+++|+.
T Consensus 147 ~d~~~l~~~l~~~~~~~v~i~~p~n--------ptG------~~~-~~~~l~~i~~~~~~~~~~ 195 (391)
T 3dzz_A 147 VNWADLEEKLATPSVRMMVFCNPHN--------PIG------YAW-SEEEVKRIAELCAKHQVL 195 (391)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSBT--------TTT------BCC-CHHHHHHHHHHHHHTTCE
T ss_pred ecHHHHHHHHhccCceEEEEECCCC--------CCC------ccc-CHHHHHHHHHHHHHCCCE
Confidence 6778877777654555444432111 111 001 234489999999999873
No 221
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=24.33 E-value=73 Score=23.27 Aligned_cols=21 Identities=29% Similarity=0.197 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHcCCCeEEEe
Q psy1381 36 FDANHWADILASSGAKYVVLT 56 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlT 56 (102)
|||-++|+.+.++||..+=+.
T Consensus 65 ~~p~~~A~~~~~~GA~~isvl 85 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVL 85 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEe
Confidence 899999999999999998663
No 222
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=24.32 E-value=81 Score=24.40 Aligned_cols=39 Identities=3% Similarity=-0.191 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
++.+.++++.|+..|+++. + ..++++++++.|.++|++.
T Consensus 170 ~~m~~laa~~g~~vVlmh~---~--------------------d~~~~~~l~~~a~~~GI~~ 208 (323)
T 4djd_D 170 KSLTAACMVHKHNIIARSP---L--------------------DINICKQLNILINEMNLPL 208 (323)
T ss_dssp HHHHHHHHHHTCEEEEECS---S--------------------CHHHHHHHHHHHHTTTCCG
T ss_pred HHHHHHHHHhCCeEEEEcc---c--------------------hHHHHHHHHHHHHHcCCCH
Confidence 5788899999988888751 0 1379999999999999975
No 223
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=24.20 E-value=57 Score=22.67 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=22.7
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
.....+++-++++++++++.+|+| |++
T Consensus 220 ~~H~t~~~a~~~~~~~~~~~lvl~--H~~ 246 (280)
T 2e7y_A 220 KNHAAIDEVMESVKAAGVKKVILY--HIS 246 (280)
T ss_dssp -CCCBHHHHHHHHHHHTCCEEEEE--SCC
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEE--eec
Confidence 346788999999999999999998 654
No 224
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=24.20 E-value=61 Score=22.31 Aligned_cols=53 Identities=17% Similarity=-0.028 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++++++.|++++++. -|+.-+....+ . .....--.+.++++++.++++|+
T Consensus 79 ~~~i~~A~~lGa~~v~~~----~g~~~~~~~~~--~-~~~~~~~~~~l~~l~~~a~~~gv 131 (254)
T 3ayv_A 79 LFGLDRAAELGADRAVFH----SGIPHGRTPEE--A-LERALPLAEALGLVVRRARTLGV 131 (254)
T ss_dssp HHHHHHHHHTTCSEEEEE----CCCCTTCCHHH--H-HHTHHHHHHHTHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCEEEEC----CCCCccccccc--H-HHHHHHHHHHHHHHHHHHhhcCC
Confidence 467889999999999874 34432211000 0 00000024667788888888886
No 225
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=24.18 E-value=37 Score=26.59 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=24.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
..-.|-..+++....++|||.||+++---|
T Consensus 98 sTG~f~s~e~a~~hl~aGAkkViIsaps~d 127 (335)
T 3doc_A 98 CTGIFTSRDKAALHLEAGAKRVIVSAPADG 127 (335)
T ss_dssp CSSSCCSHHHHTHHHHTTCSEEEESSCCTT
T ss_pred ccCccCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 344677799999999999999999865433
No 226
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=24.05 E-value=1.3e+02 Score=19.56 Aligned_cols=36 Identities=14% Similarity=-0.030 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++.+.++|.+.+++.. |+. -.++++.|+++|+.
T Consensus 91 ~~vv~~~~~~gi~~i~~~~----g~~---------------------~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQY----NTY---------------------NREASKKADEAGLI 126 (144)
T ss_dssp HHHHHHHHHHTCSEEEECT----TCC---------------------CHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEECC----Cch---------------------HHHHHHHHHHcCCE
Confidence 5567777889999776542 321 37889999999874
No 227
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=23.77 E-value=56 Score=26.72 Aligned_cols=27 Identities=7% Similarity=0.048 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 34 EFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
..-.+++.++.|++.|.+++++|--..
T Consensus 340 G~~t~eemv~~A~~~Gl~~IaiTDH~~ 366 (578)
T 2w9m_A 340 GGASIREMAEATLTLGHEFLGTADHSR 366 (578)
T ss_dssp CSSCHHHHHHHHHHTTCSEEEECEEBT
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCCCC
Confidence 466789999999999999999886443
No 228
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=23.76 E-value=45 Score=26.18 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=24.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
..-.|-..+++....++|||.||+++---
T Consensus 98 sTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (338)
T 3lvf_P 98 CTGFYTDKDKAQAHIEAGAKKVLISAPAT 126 (338)
T ss_dssp CSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred ccCCcCCHHHHHHHHHcCCCEEEECCCCC
Confidence 44567779999999999999999987543
No 229
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=23.70 E-value=1.1e+02 Score=21.71 Aligned_cols=46 Identities=13% Similarity=0.043 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.+|+++..+++.+-..+.++++.-|. .++ . --| +.++.+-|+++|+
T Consensus 113 ~~d~~~l~~~i~~~~~~~v~~~~~~n--------ptG------~---~~~-l~~i~~l~~~~~~ 158 (384)
T 3zrp_A 113 YVKPGEVEEEVRKSEYKLVALTHVET--------STG------V---REP-VKDVINKIRKYVE 158 (384)
T ss_dssp CCCHHHHHHHHHHSCEEEEEEESEET--------TTT------E---ECC-HHHHHHHHGGGEE
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCC--------CCc------e---ECc-HHHHHHHHHhcCC
Confidence 46899998888876666665553221 111 0 012 7889999999885
No 230
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=23.67 E-value=87 Score=22.75 Aligned_cols=53 Identities=9% Similarity=-0.081 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
++-+++++++|++.|=|..-- ..+ -+......++ ....+.+.++++.|+++||
T Consensus 31 ~~d~~~i~~~G~n~vRi~i~~-~~~--~~~~~~g~~~----~~~~~~l~~~v~~a~~~Gi 83 (343)
T 1ceo_A 31 EKDIETIAEAGFDHVRLPFDY-PII--ESDDNVGEYK----EDGLSYIDRCLEWCKKYNL 83 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEEEG-GGT--BCSSSTTCBC----HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEecCCH-HHh--ccccCCCccc----HHHHHHHHHHHHHHHHCCC
Confidence 455678899999999775431 111 1111100111 0135788999999999998
No 231
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=23.67 E-value=40 Score=22.46 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
...++.++++|.+.|||-- .||. | .--|+.|++++|++||.
T Consensus 75 ~llA~Ral~~GI~~vvfDr---gg~~---------y--------hGrV~Ala~~are~Gl~ 115 (116)
T 3r8s_O 75 KAVAERALEKGIKDVSFDR---SGFQ---------Y--------HGRVQALADAAREAGLQ 115 (116)
T ss_dssp HHHHHHHHTTTCCCCEEEC---TTSC---------S--------SSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCCEEEEec---CCCc---------c--------cHHHHHHHHHHHHhCCC
Confidence 4567889999999888752 2321 1 23699999999999984
No 232
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=23.63 E-value=58 Score=23.43 Aligned_cols=25 Identities=24% Similarity=0.177 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
...+++-+++++++|+|.+|+| |++
T Consensus 247 H~t~~~a~~~a~~~~~~~lil~--H~s 271 (320)
T 1y44_A 247 HSTTEQAAVTAKEARAKQLILT--HIS 271 (320)
T ss_dssp CCBHHHHHHHHHHHTCSEEEEE--CBC
T ss_pred CCCHHHHHHHHHHcCCCEEEEE--eEc
Confidence 5778999999999999999998 554
No 233
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=23.61 E-value=80 Score=23.41 Aligned_cols=49 Identities=14% Similarity=-0.036 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+|+++..+++++-..+-+++..=|.. ++ .....+-+.+|++.|+++|+.
T Consensus 181 ~d~~~le~~i~~~~~~~vil~~p~np--------tG-------~~~~~~~l~~l~~l~~~~~~~ 229 (421)
T 3l8a_A 181 IDFEQLEKDIIDNNVKIYLLCSPHNP--------GG-------RVWDNDDLIKIAELCKKHGVI 229 (421)
T ss_dssp CCHHHHHHHHHHTTEEEEEEESSBTT--------TT-------BCCCHHHHHHHHHHHHHHTCE
T ss_pred eCHHHHHHHhhccCCeEEEECCCCCC--------CC-------CcCCHHHHHHHHHHHHHcCCE
Confidence 57888887777555555544332211 01 111234599999999999873
No 234
>2jg6_A DNA-3-methyladenine glycosidase; 3-methyladenine-DNA-glycosylase-I, hydrolase; 1.70A {Staphylococcus aureus} PDB: 4aia_A* 4ai5_A* 4ai4_A
Probab=23.55 E-value=21 Score=25.98 Aligned_cols=94 Identities=9% Similarity=0.092 Sum_probs=59.5
Q ss_pred CChHHHHHHHHhCCC-C----------------------------CChHHhhccCCC---CCCCHHHHHHHHHHcCC---
Q psy1381 6 PNSTVTKFMERNYKP-G----------------------------FTYQDFAKDFTA---EFFDANHWADILASSGA--- 50 (102)
Q Consensus 6 ~~~~y~~~~~~~~~~-~----------------------------~~Y~~~a~~F~p---~~fDp~~Wa~l~k~aGa--- 50 (102)
.++.|.+||-+..|- . ..|.+....|+| ..|+.+.+.+|+.+.|.
T Consensus 9 ~~ply~~YHD~EWG~Pv~Dd~~LFE~L~LEgfQAGLSW~tIL~KRe~fR~AF~~FD~~~VA~~~e~dve~Ll~d~gIIRn 88 (186)
T 2jg6_A 9 KDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHH 88 (186)
T ss_dssp CCHHHHHHHHHTTTSCCCCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTGGGCHHHHTTCCHHHHHHHTTCTTSCCC
T ss_pred CChHHHHHHHhccCCcccCcHHHHHHHHHHHHhccCCHHHHHHhHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCccchhh
Confidence 467888999888862 1 223445557888 48999999999988885
Q ss_pred -----------CeEEEeeeecCCcc--cCCCC---C-CCCccccc-CCCCCchHHHHHHHHhhcCCC
Q psy1381 51 -----------KYVVLTSKHHEGYT--LWPSK---Y-AFSWNSMD-IGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 51 -----------kyvvlTtKHHdGF~--lW~S~---~-~~~~~s~~-~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+-++=..+-+.+|. +|.-. . ...|.+.. .+..-.+-..+++..+|+|.-
T Consensus 89 r~KI~A~i~NA~~~l~i~~e~gsf~~ylW~fv~~~p~~~~~~~~~~vp~~t~~S~~lsKdLKkrGFk 155 (186)
T 2jg6_A 89 RKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFK 155 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHGGGTTSCEECCCCSGGGCCSCCHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHhcCCCCCccCCccchhhcCCCCHHHHHHHHHHHHCCCe
Confidence 22333344556676 45221 1 11233332 333667788899999999863
No 235
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=23.50 E-value=89 Score=20.65 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHcC-CCeEEEeeeecCC
Q psy1381 35 FFDANHWADILASSG-AKYVVLTSKHHEG 62 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aG-akyvvlTtKHHdG 62 (102)
.|++++|.++++++| ++-+-+...-..+
T Consensus 158 ~~~~~~~~~~l~~aG~f~~~~~~~~~~~~ 186 (211)
T 3e23_A 158 YPSEEWLRARYAEAGTWASVAVESSEGKG 186 (211)
T ss_dssp CCCHHHHHHHHHHHCCCSEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 589999999999999 9887766554444
No 236
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=23.49 E-value=51 Score=24.31 Aligned_cols=50 Identities=12% Similarity=0.002 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
-|.+.|= -+|.+|||.|+-...---| +| ..++..+|+++.+-++++|..-
T Consensus 112 ifS~~QA-~~Aa~AGa~yISPfvgRi~-----------d~----g~dG~~~v~~i~~~~~~~~~~T 161 (223)
T 3s1x_A 112 VFNPIQA-LLAAKAGVTYVSPFVGRLD-----------DI----GEDGMQIIDMIRTIFNNYIIKT 161 (223)
T ss_dssp ECSHHHH-HHHHHTTCSEEEEBSHHHH-----------HT----TSCTHHHHHHHHHHHHHTTCCS
T ss_pred eCCHHHH-HHHHHcCCeEEEeecchHh-----------hc----CCCHHHHHHHHHHHHHHcCCCC
Confidence 3666664 5677899999866332222 11 1346789999999999998753
No 237
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=23.44 E-value=81 Score=22.83 Aligned_cols=26 Identities=31% Similarity=0.425 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCc
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGY 63 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF 63 (102)
..+.++.+.+.|.+.||+|.-|.+|-
T Consensus 166 ~~~aa~~l~~~g~~~Vvvt~~~~~G~ 191 (289)
T 3pzs_A 166 AVQVARSLCARGPKVVLVKHLSRAGY 191 (289)
T ss_dssp HHHHHHHHHTTSCSEEEECCCGGGSS
T ss_pred HHHHHHHHHHHCCCEEEEecccCCCC
Confidence 45566677778999999997777774
No 238
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=23.42 E-value=39 Score=26.50 Aligned_cols=30 Identities=23% Similarity=0.254 Sum_probs=24.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 31 FTAEFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 31 F~p~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
|..-.|-..+++....++|||.||+++---
T Consensus 99 esTG~f~s~e~a~~hl~aGAkkViIsaps~ 128 (337)
T 3v1y_O 99 ESTGVFTDKEKAAAHLKGGAKKVVISAPSK 128 (337)
T ss_dssp ECSSSCCSHHHHTHHHHTTCCEEEESSCCS
T ss_pred EeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 345567778999999999999999998643
No 239
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=23.13 E-value=64 Score=26.27 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEee
Q psy1381 34 EFFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
...++++.++.|++.|.+++++|-
T Consensus 350 G~~t~ee~v~~A~~~G~~~iaiTD 373 (575)
T 3b0x_A 350 GQNTLEELWEAAKTMGYRYLAVTD 373 (575)
T ss_dssp CSCCHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCEEEEcC
Confidence 357899999999999999999988
No 240
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=23.08 E-value=40 Score=26.42 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=21.8
Q ss_pred CCCCCHHHHHHHHHHcCCCeEEEeeee
Q psy1381 33 AEFFDANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 33 p~~fDp~~Wa~l~k~aGakyvvlTtKH 59 (102)
.-.|-..+++....++|||.||+.+--
T Consensus 107 tG~f~s~e~a~~hl~aGakkVVIsaps 133 (345)
T 2b4r_O 107 TGVFLTKELASSHLKGGAKKVIMSAPP 133 (345)
T ss_dssp SSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred cCccccHhhHHHHHHCCCCEEEECCCC
Confidence 345677899999999999999997543
No 241
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=23.05 E-value=69 Score=22.42 Aligned_cols=58 Identities=7% Similarity=-0.093 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCeEEEeeeec--CCcccCCCCCC--CCc-ccccCCCCCchHHHHHHHHhhcCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHH--EGYTLWPSKYA--FSW-NSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHH--dGF~lW~S~~~--~~~-~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
++.++++++.|++++++..-.. .|. ++...+ ... ......--.+.++++++.++++||
T Consensus 93 ~~~i~~a~~lG~~~v~~~~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv 155 (301)
T 3cny_A 93 EKHCQYLKAINAPVAVVSEQTYTIQRS--DTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGL 155 (301)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTCCTTC--SSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEecCCCccccCc--ccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5788899999999998864210 021 110000 000 000000014678888888999887
No 242
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=23.02 E-value=1.4e+02 Score=21.56 Aligned_cols=17 Identities=12% Similarity=-0.078 Sum_probs=14.1
Q ss_pred CchHHHHHHHHhhcCCC
Q psy1381 83 RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl~ 99 (102)
.+-+.+|++.|+++|+.
T Consensus 181 ~~~l~~l~~~~~~~~~~ 197 (390)
T 1d2f_A 181 CDELEIMADLCERHGVR 197 (390)
T ss_dssp TTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCE
Confidence 46789999999999863
No 243
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=22.99 E-value=59 Score=22.37 Aligned_cols=53 Identities=19% Similarity=0.134 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 39 NHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
+++++++++.|++++++.+ |.. +.... .. .....--.+.++++++.++++|+.
T Consensus 86 ~~~i~~a~~lG~~~v~~~~----g~~--~~~~~-~~-~~~~~~~~~~l~~l~~~a~~~gv~ 138 (275)
T 3qc0_A 86 RRAVDEAAELGADCLVLVA----GGL--PGGSK-NI-DAARRMVVEGIAAVLPHARAAGVP 138 (275)
T ss_dssp HHHHHHHHHTTCSCEEEEC----BCC--CTTCC-CH-HHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCEEEEee----CCC--CCCCc-CH-HHHHHHHHHHHHHHHHHHHHcCCE
Confidence 5788999999999999854 211 10000 00 000000247788888889998874
No 244
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.89 E-value=1.7e+02 Score=21.18 Aligned_cols=45 Identities=13% Similarity=-0.089 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
..|+++..+++.+.+.+-++++. ++.|. -.| +.+|.+-|+++|+.
T Consensus 150 ~~d~~~l~~~i~~~~~~~v~~~~-~~~G~------------------~~~-l~~i~~l~~~~~~~ 194 (417)
T 3n0l_A 150 RIDYEKVREIAKKEKPKLIVCGA-SAYAR------------------VID-FAKFREIADEIGAY 194 (417)
T ss_dssp SCCHHHHHHHHHHHCCSEEEECC-SSCCS------------------CCC-HHHHHHHHHHHTCE
T ss_pred CcCHHHHHHHHHhcCCeEEEECC-cccCc------------------cCC-HHHHHHHHHHcCCE
Confidence 37999999998866777665332 22221 112 78999999999863
No 245
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=22.74 E-value=50 Score=28.73 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCeEEEeeeecCC-c-------ccCCCCCCCCccccc----CCC-C---CchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEG-Y-------TLWPSKYAFSWNSMD----IGP-K---RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdG-F-------~lW~S~~~~~~~s~~----~~p-~---rDiv~el~~a~~~~Gl~ 99 (102)
.++-++++|...|-|+-=+.-. + .-|--... +|.... ..| + .+=+++|+++|+++||-
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~-dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~ 547 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPR-NYNVPEGAYATTPEGTARITELKQLIQSLHQQRIG 547 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEE-EEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCE
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCc-CCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCE
Confidence 5788999999999988544321 1 01221222 222111 111 1 36799999999999983
No 246
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=22.67 E-value=41 Score=24.59 Aligned_cols=50 Identities=22% Similarity=0.146 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCCC
Q psy1381 35 FFDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~~ 100 (102)
-|.+.|=+ ++.+|||.|+-...---| +| ..++..+|+++.+-++++|..-
T Consensus 110 ifS~~Qa~-~Aa~AGa~yISPfvgRi~-----------d~----~~dG~~~v~~i~~~~~~~~~~t 159 (212)
T 3r8r_A 110 IFNANQAL-LAARAGATYVSPFLGRLD-----------DI----GHNGLDLISEVKQIFDIHGLDT 159 (212)
T ss_dssp ECSHHHHH-HHHHHTCSEEEEBHHHHH-----------HT----TSCHHHHHHHHHHHHHHHTCCC
T ss_pred eCCHHHHH-HHHHcCCeEEEeccchhh-----------hc----CCChHHHHHHHHHHHHHcCCCC
Confidence 36766644 688899999866332222 11 1346789999999999998753
No 247
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=22.60 E-value=73 Score=22.31 Aligned_cols=26 Identities=19% Similarity=0.126 Sum_probs=22.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCeEEEee
Q psy1381 32 TAEFFDANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 32 ~p~~fDp~~Wa~l~k~aGakyvvlTt 57 (102)
.+...++++=+++++++++|.+|+|=
T Consensus 197 ~~~H~~~~~a~~~~~~~~~k~lil~H 222 (258)
T 3g1p_A 197 PRNHCDLNTVLALNQVIRSPRVILTH 222 (258)
T ss_dssp CSSSCBHHHHHHHHHHHCCSCEEEES
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 34568999999999999999999883
No 248
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=22.56 E-value=50 Score=25.85 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=30.5
Q ss_pred CCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeecC
Q psy1381 19 KPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 19 ~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHHd 61 (102)
.|-+.|......+..+.+.+...|+++..+|+..++..--|-.
T Consensus 118 iPY~~YaRQdr~~~r~~i~ak~vA~lL~~aGad~vit~DlHs~ 160 (379)
T 2ji4_A 118 IPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQK 160 (379)
T ss_dssp CSSCSSCCC-------CCHHHHHHHHHHHTTCCEEEEESCSSG
T ss_pred EeccCccccccccCCCcHHHHHHHHHHHHcCCCEEEEecCCCh
Confidence 4778898887788888899999999999999988877777753
No 249
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=22.52 E-value=48 Score=23.27 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCCeEEEe
Q psy1381 39 NHWADILASSGAKYVVLT 56 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvlT 56 (102)
++.++.+.++|+.++++-
T Consensus 98 ~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 899999999999999984
No 250
>2cxh_A Probable BRIX-domain ribosomal biogenesis protein; 18S rRNA, IMP4, U3 snoRNP, ribosomal biogenesis binding, structural genomics, NPPSFA; 1.80A {Aeropyrum pernix} SCOP: c.51.1.2
Probab=22.42 E-value=2.3e+02 Score=20.57 Aligned_cols=52 Identities=21% Similarity=0.349 Sum_probs=39.0
Q ss_pred CCCCChHHHHHHHHhC--CCCCChHHhhccCCCCCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 3 SENPNSTVTKFMERNY--KPGFTYQDFAKDFTAEFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 3 ~~~~~~~y~~~~~~~~--~~~~~Y~~~a~~F~p~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
|++|++...+|+++-- .|... ..+-.++.-++.++.|..-|+..+|++..+.
T Consensus 41 Sr~pS~r~r~fakeL~~~lPns~------~i~Rgk~sLkeL~e~a~~~~~tdlivV~e~r 94 (217)
T 2cxh_A 41 SRRPSPRIRSFVKDLSATIPGAF------RFTRGHYSMEELAREAIIRGADRIVVVGERR 94 (217)
T ss_dssp SSSCCHHHHHHHHHHHTTSTTEE------ECCCTTCCHHHHHHHHHHTTEEEEEEEEEET
T ss_pred CCCCCHHHHHHHHHHHHHCCCCE------EeecCCcCHHHHHHHHHhCCCCEEEEEEecC
Confidence 7889999999988621 22222 2233578889999999999999999888777
No 251
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=22.42 E-value=73 Score=22.61 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=20.2
Q ss_pred CCCHHHHHHHHHHcCCCeEEEeee
Q psy1381 35 FFDANHWADILASSGAKYVVLTSK 58 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGakyvvlTtK 58 (102)
.|++++|.++++++|++-+-+..-
T Consensus 251 ~~t~~el~~ll~~aGF~v~~~~~~ 274 (299)
T 3g2m_A 251 LLAPDQVVRELVRSGFDVIAQTPF 274 (299)
T ss_dssp EECHHHHHHHHHHTTCEEEEEEEE
T ss_pred EeCHHHHHHHHHHCCCEEEEEEec
Confidence 479999999999999987766643
No 252
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=22.33 E-value=1.5e+02 Score=22.01 Aligned_cols=50 Identities=12% Similarity=0.037 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHc---CCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 36 FDANHWADILASS---GAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 36 fDp~~Wa~l~k~a---GakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.|+++..+++.+. ..+-|+++.=|..+ .-..+..+-++++++-|+++|+.
T Consensus 167 ~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~--------------gG~~~~~~~l~~i~~la~~~gi~ 219 (467)
T 2oqx_A 167 FDLEGLERGIEEVGPNNVPYIVATITSNSA--------------GGQPVSLANLKAMYSIAKKYDIP 219 (467)
T ss_dssp BCHHHHHHHHHHHCGGGCCCEEEESSBCGG--------------GCBCCCHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHhcCCCceeEEEEeccccCC--------------CCccCCHHHHHHHHHHHHHcCCE
Confidence 5999999998863 35555555433320 01112367799999999999975
No 253
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=22.19 E-value=56 Score=25.05 Aligned_cols=52 Identities=13% Similarity=0.160 Sum_probs=32.6
Q ss_pred HHHHHHcCCCeEEEeeeecCCccc--CCCCCCCCcccccCCC----CCchHHHHHHHHhhc
Q psy1381 42 ADILASSGAKYVVLTSKHHEGYTL--WPSKYAFSWNSMDIGP----KRDLVDYTFGNWFTG 96 (102)
Q Consensus 42 a~l~k~aGakyvvlTtKHHdGF~l--W~S~~~~~~~s~~~~p----~rDiv~el~~a~~~~ 96 (102)
|+.|++||+..|=|-+-| ||.| |=|..+ |-.+-.+|. +.-++.|+++++|+.
T Consensus 158 A~rA~~AGFDgVEIH~ah--GYLl~QFLSp~t-N~RtDeYGGS~eNR~Rf~~Eii~avr~~ 215 (358)
T 4a3u_A 158 ARHALKAGFDGVQIHAAN--GYLIDEFIRDST-NHRHDEYGGAVENRIRLLKDVTERVIAT 215 (358)
T ss_dssp HHHHHHTTCSEEEEEECT--TSHHHHHHSTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEeecccC--CCcHHhceeccc-CCeeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 566789999999999888 6653 223333 111223333 346778888887763
No 254
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=21.99 E-value=1.4e+02 Score=22.47 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+-.++++++|+++|-+-. |-...+ . ...-+-+.++++.|+++||
T Consensus 31 d~~~ilk~~G~N~VRi~~--------w~~P~~-g------~~~~~~~~~~~~~A~~~Gl 74 (332)
T 1hjs_A 31 PLENILAANGVNTVRQRV--------WVNPAD-G------NYNLDYNIAIAKRAKAAGL 74 (332)
T ss_dssp CHHHHHHHTTCCEEEEEE--------CSSCTT-C------TTSHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHCCCCEEEEee--------eeCCCC-C------cCCHHHHHHHHHHHHHCCC
Confidence 347889999999999863 422221 1 1124557778889999997
No 255
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=21.93 E-value=1.3e+02 Score=22.34 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHcC---CCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSG---AKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aG---akyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+|+++..+++.+-. .+.++++.-|.. + ++ .....+-+.++++.|+++|+.
T Consensus 157 ~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~-----p--tG-------~~~~~~~l~~i~~la~~~~i~ 210 (456)
T 2ez2_A 157 DIDLKKLQKLIDEKGAENIAYICLAVTVNL-----A--GG-------QPVSMANMRAVRELTEAHGIK 210 (456)
T ss_dssp CBCHHHHHHHHHHHCGGGEEEEEEESSBTT-----T--TS-------BCCCHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhccccceeEEEEeccCCC-----C--CC-------ccCCHHHHHHHHHHHHHcCCe
Confidence 458999988887644 244444422220 0 00 112356799999999999975
No 256
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=21.81 E-value=61 Score=22.54 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=15.0
Q ss_pred HHHHHHHHHcCCCeEEE
Q psy1381 39 NHWADILASSGAKYVVL 55 (102)
Q Consensus 39 ~~Wa~l~k~aGakyvvl 55 (102)
+++++++++.|++++++
T Consensus 92 ~~~i~~A~~lG~~~v~~ 108 (287)
T 2x7v_A 92 KKEVEICRKLGIRYLNI 108 (287)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 46789999999999987
No 257
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=21.70 E-value=1.2e+02 Score=21.31 Aligned_cols=43 Identities=9% Similarity=-0.167 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
.+.++.++.++++|+.+|=+...... ..-+.++.+.++++||.
T Consensus 41 ~~~~~~l~~~~~~G~~~vEl~~~~~~---------------------~~~~~~~~~~l~~~gl~ 83 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQAVEIAVRDPS---------------------IVDWNEVKILSEELNLP 83 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGG---------------------GSCHHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCCcc---------------------hhhHHHHHHHHHHcCCe
Confidence 36789999999999999988754210 02256778888888875
No 258
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=21.70 E-value=1.3e+02 Score=21.56 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=27.5
Q ss_pred HHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
=++.+.++||..+++-+.+-. .| +.+.++++.+++.|+.
T Consensus 93 ~i~~~~~aGad~I~l~~~~~~------------------~p--~~l~~~i~~~~~~g~~ 131 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFRS------------------RP--VDIDSLLTRIRLHGLL 131 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSSC------------------CS--SCHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECccccC------------------Ch--HHHHHHHHHHHHCCCE
Confidence 367789999999988765410 11 4677888888887763
No 259
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=21.62 E-value=21 Score=21.65 Aligned_cols=14 Identities=7% Similarity=0.226 Sum_probs=11.9
Q ss_pred HHHHHHHHHHcCCC
Q psy1381 38 ANHWADILASSGAK 51 (102)
Q Consensus 38 p~~Wa~l~k~aGak 51 (102)
|.+|.++++.+|..
T Consensus 24 p~eW~~ll~~sGIs 37 (65)
T 2lnh_A 24 DPELKNLFDMCGIS 37 (65)
T ss_dssp CTTHHHHHHHHTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 57899999999864
No 260
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=21.61 E-value=59 Score=25.34 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=17.3
Q ss_pred CCchHHHHHHHHhhcCCCC
Q psy1381 82 KRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 82 ~rDiv~el~~a~~~~Gl~~ 100 (102)
.+||+.++.++|...||+-
T Consensus 169 ~~~i~~~i~~~l~~~Gi~v 187 (370)
T 3fky_A 169 ARDMIEAHYRACLYAGLEI 187 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHcCCCe
Confidence 5899999999999999974
No 261
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=21.41 E-value=42 Score=21.47 Aligned_cols=19 Identities=11% Similarity=-0.085 Sum_probs=17.0
Q ss_pred CCchHHHHHHHHhhcCCCC
Q psy1381 82 KRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 82 ~rDiv~el~~a~~~~Gl~~ 100 (102)
.++=|..|.++|++.|+|.
T Consensus 58 ~~eNI~~Fl~a~~~~Gv~~ 76 (108)
T 1h67_A 58 KLENIGNFLRAIKHYGVKP 76 (108)
T ss_dssp HHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHHHcCCCc
Confidence 4788999999999999984
No 262
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=21.08 E-value=57 Score=21.86 Aligned_cols=17 Identities=12% Similarity=0.495 Sum_probs=15.5
Q ss_pred CCCHHHHHHHHHHcCCC
Q psy1381 35 FFDANHWADILASSGAK 51 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aGak 51 (102)
.|.+++|.++++++|++
T Consensus 204 ~~t~~~~~~ll~~aGF~ 220 (239)
T 3bxo_A 204 LFHQAEYEAAFTAAGLR 220 (239)
T ss_dssp CCCHHHHHHHHHHTTEE
T ss_pred ecCHHHHHHHHHHCCCE
Confidence 48999999999999994
No 263
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=21.07 E-value=1.3e+02 Score=21.49 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=27.4
Q ss_pred HHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 41 WADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 41 Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
=++.+.++|+..+++-+.+-. .| +.+.++++.|++.|+.
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~------------------~p--~~l~~~i~~~~~~g~~ 131 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTARQ------------------RP--VAVEALLARIHHHHLL 131 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSSC------------------CS--SCHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCCEEEECccccC------------------CH--HHHHHHHHHHHHCCCE
Confidence 367789999999988765420 11 4677888888877763
No 264
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=21.04 E-value=70 Score=21.39 Aligned_cols=23 Identities=4% Similarity=0.024 Sum_probs=19.1
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEe
Q psy1381 34 EFFDANHWADILASSGAKYVVLT 56 (102)
Q Consensus 34 ~~fDp~~Wa~l~k~aGakyvvlT 56 (102)
..|++++|.++++++|++-+-+.
T Consensus 201 ~~~~~~~l~~ll~~aGf~~~~~~ 223 (246)
T 1y8c_A 201 RAYKEEDIEKYLKHGQLNILDKV 223 (246)
T ss_dssp ECCCHHHHHHHHHHTTEEEEEEE
T ss_pred EcCCHHHHHHHHHHCCCeEEEEE
Confidence 46799999999999998866553
No 265
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=21.02 E-value=45 Score=26.29 Aligned_cols=30 Identities=27% Similarity=0.278 Sum_probs=24.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCeEEEeeeec
Q psy1381 31 FTAEFFDANHWADILASSGAKYVVLTSKHH 60 (102)
Q Consensus 31 F~p~~fDp~~Wa~l~k~aGakyvvlTtKHH 60 (102)
|..-.|-..+++....++|||.||+++---
T Consensus 97 esTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (345)
T 4dib_A 97 EATGKFNSKEKAILHVEAGAKKVILTAPGK 126 (345)
T ss_dssp ECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred EeccCcCCHHHHHHHHHCCCCEEEECCCCC
Confidence 345577789999999999999999987643
No 266
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=20.87 E-value=63 Score=23.66 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=22.3
Q ss_pred CCCHHH---HHHHHHHcCCCeEEEeeeecC
Q psy1381 35 FFDANH---WADILASSGAKYVVLTSKHHE 61 (102)
Q Consensus 35 ~fDp~~---Wa~l~k~aGakyvvlTtKHHd 61 (102)
..++++ .++.+++.|.+++++|--+..
T Consensus 16 ~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~ 45 (262)
T 3qy7_A 16 AGDSADSIEMARAAVRQGIRTIIATPHHNN 45 (262)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEECCCBSEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCC
Confidence 456775 999999999999999876654
No 267
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=20.86 E-value=2e+02 Score=20.92 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 36 FDANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 36 fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.|+++..+++.+-+.+-+++..-|. + ++ . --+ +.+|++-|+++|+
T Consensus 173 ~d~~~le~~l~~~~~~~vi~~~~~n------p--tG------~---~~~-l~~l~~la~~~~~ 217 (409)
T 3kki_A 173 NNCDHLRMLIQRHGPGIIVVDSIYS------T--LG------T---IAP-LAELVNISKEFGC 217 (409)
T ss_dssp TCHHHHHHHHHHHCSCEEEEESBCT------T--TC------C---BCC-HHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCCeEEEECCCCC------C--CC------C---cCC-HHHHHHHHHHcCC
Confidence 5889998888876666555542211 0 11 1 112 8899999999986
No 268
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=20.81 E-value=91 Score=23.42 Aligned_cols=52 Identities=10% Similarity=0.227 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCC--CCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYA--FSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~--~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
.++-+++++++|++-|=|-.. |..-.. .++. .+ ....+.+.++++.|+++||
T Consensus 64 ~~~di~~i~~~G~N~vRipi~-------w~~~~~~~~~~~-~~-~~~l~~~~~vv~~a~~~Gi 117 (376)
T 3ayr_A 64 TEDMFKVLIDNQFNVFRIPTT-------WSGHFGEAPDYK-ID-EKWLKRVHEVVDYPYKNGA 117 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECCC-------CTTSBCCTTTCC-BC-HHHHHHHHHHHHHHHTTTC
T ss_pred cHHHHHHHHHcCCCEEEEeeE-------ChhhcCCCCCCc-cC-HHHHHHHHHHHHHHHHCCC
Confidence 466778889999999877421 321111 0110 00 0125789999999999998
No 269
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=20.75 E-value=2.6e+02 Score=20.60 Aligned_cols=51 Identities=12% Similarity=-0.011 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 37 DANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
|+++..+++++.+-+-.++...++.| +.....+..+.+.+|.+-|+++|+.
T Consensus 186 d~~~le~~l~~~~~~~~~vi~ep~~~------------~~g~~~~~~~~l~~l~~l~~~~~~l 236 (429)
T 4e77_A 186 DLASVRQAFEQYPQEVACIIVEPVAG------------NMNCIPPLPEFLPGLRALCDEFGAL 236 (429)
T ss_dssp CHHHHHHHHHHSTTTEEEEEECSSBC------------TTSCBCCCTTHHHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHhcCCCEEEEEECCccC------------CCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 89999998887544433333332210 1122344567899999999999873
No 270
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=20.73 E-value=1.2e+02 Score=22.50 Aligned_cols=51 Identities=14% Similarity=0.037 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHcC---CCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCCC
Q psy1381 35 FFDANHWADILASSG---AKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 35 ~fDp~~Wa~l~k~aG---akyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl~ 99 (102)
..|+++..+++.+.+ .+-++++.-|..+ + -..+..+-+.++++-|+++|+.
T Consensus 166 ~~d~~~le~~i~~~~~~~~~~vi~~~~~np~--------g------G~~~~~~~l~~i~~la~~~gi~ 219 (467)
T 1ax4_A 166 DFDIKKLKENIAQHGADNIVAIVSTVTCNSA--------G------GQPVSMSNLKEVYEIAKQHGIF 219 (467)
T ss_dssp CBCHHHHHHHHHHHCGGGEEEEEEESSBTTT--------T------SBCCCHHHHHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHhcCCCCeeEEEEeccccCC--------C------ccCCChhHHHHHHHHHHHcCCE
Confidence 469999999988643 4444444333221 0 0112357889999999999975
No 271
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=20.65 E-value=1.8e+02 Score=20.96 Aligned_cols=17 Identities=6% Similarity=-0.132 Sum_probs=13.7
Q ss_pred CchHHHHHHHHhhcCCC
Q psy1381 83 RDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 83 rDiv~el~~a~~~~Gl~ 99 (102)
.+-+.+|++.|+++|+.
T Consensus 198 ~~~l~~i~~~~~~~~~~ 214 (407)
T 3nra_A 198 AEEIGQIAALAARYGAT 214 (407)
T ss_dssp HHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCE
Confidence 44589999999999863
No 272
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=20.59 E-value=97 Score=24.65 Aligned_cols=44 Identities=7% Similarity=-0.093 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
+++++|++.|++.+ ||+=|.- +. ....-..-+++|.+.|++.|+
T Consensus 45 ~Yi~~a~~~Gf~~I-FTSL~~~-------e~-------~~~~~~~~~~~l~~~a~~~g~ 88 (385)
T 1x7f_A 45 AYISAAARHGFSRI-FTCLLSV-------NR-------PKEEIVAEFKEIINHAKDNNM 88 (385)
T ss_dssp HHHHHHHTTTEEEE-EEEECCC----------------------HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEE-EccCCcc-------CC-------ChHHHHHHHHHHHHHHHHCCC
Confidence 79999999999975 7776621 00 111135678899999999987
No 273
>1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A*
Probab=20.59 E-value=74 Score=27.59 Aligned_cols=48 Identities=15% Similarity=0.036 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCC-CCchHHHHHHHHhhcCCC
Q psy1381 38 ANHWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGP-KRDLVDYTFGNWFTGGSP 99 (102)
Q Consensus 38 p~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p-~rDiv~el~~a~~~~Gl~ 99 (102)
-.+.|++.+..|.+-+|| +++..+ ..-.++ -.+=|+.|++.+|.+||-
T Consensus 186 ~~dYAR~lASiGINgvvl------------NNVNa~--~~~lt~~~l~~v~~lAd~fRpYGIk 234 (708)
T 1gqi_A 186 YTDYARINASLGINGTVI------------NNVNAD--PRVLSDQFLQKIAALADAFRPYGIK 234 (708)
T ss_dssp HHHHHHHHHTTTCCEEEC------------SCSSCC--GGGGSHHHHHHHHHHHHHHGGGTCE
T ss_pred HHHHHHHHhhcCcceEEe------------cCCCCC--cccCCcHHHHHHHHHHHHHHhhcCe
Confidence 479999999999999998 233211 222233 378899999999999983
No 274
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=20.58 E-value=1.1e+02 Score=23.07 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=22.3
Q ss_pred cCCCCCC--CHHHHHHHHHHcCCCeEEEe
Q psy1381 30 DFTAEFF--DANHWADILASSGAKYVVLT 56 (102)
Q Consensus 30 ~F~p~~f--Dp~~Wa~l~k~aGakyvvlT 56 (102)
..+|++| ..+..++-+++.|+|..|=+
T Consensus 66 ~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~ 94 (362)
T 1uas_A 66 VPNRQTFPSGIKALADYVHAKGLKLGIYS 94 (362)
T ss_dssp CBCTTTCTTCHHHHHHHHHHTTCEEEEEE
T ss_pred eEChhccCccHHHHHHHHHHCCCEeEEEe
Confidence 3467889 79999999999999976644
No 275
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=20.56 E-value=77 Score=22.06 Aligned_cols=19 Identities=11% Similarity=0.300 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHcCCCeEEE
Q psy1381 37 DANHWADILASSGAKYVVL 55 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvl 55 (102)
.|+.+++.+.++|+.++++
T Consensus 71 ~p~~~~~~~~~aGad~i~v 89 (218)
T 3jr2_A 71 GGAILSRMAFEAGADWITV 89 (218)
T ss_dssp CHHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHhcCCCEEEE
Confidence 5888999999999999877
No 276
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=20.48 E-value=66 Score=24.89 Aligned_cols=19 Identities=26% Similarity=0.342 Sum_probs=17.2
Q ss_pred CCchHHHHHHHHhhcCCCC
Q psy1381 82 KRDLVDYTFGNWFTGGSPG 100 (102)
Q Consensus 82 ~rDiv~el~~a~~~~Gl~~ 100 (102)
.+||+.++.++|.+.||+-
T Consensus 168 ~~~~~~~i~~~l~~~Gi~v 186 (356)
T 2d3a_A 168 GRDIVDAHYKACLYAGINI 186 (356)
T ss_dssp CHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHCCCCE
Confidence 5799999999999999974
No 277
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=20.47 E-value=2.7e+02 Score=24.18 Aligned_cols=73 Identities=16% Similarity=0.211 Sum_probs=40.3
Q ss_pred hHHhhccCCCC--CCCHHHHHHHHHHcCCCeEEEeeeecCCcccCCC-CCCCCcccccCCCCCchHHHHHHHHhhcCC
Q psy1381 24 YQDFAKDFTAE--FFDANHWADILASSGAKYVVLTSKHHEGYTLWPS-KYAFSWNSMDIGPKRDLVDYTFGNWFTGGS 98 (102)
Q Consensus 24 Y~~~a~~F~p~--~fDp~~Wa~l~k~aGakyvvlTtKHHdGF~lW~S-~~~~~~~s~~~~p~rDiv~el~~a~~~~Gl 98 (102)
|..+...|... .=+...+++.|++.|..||++=-. -.|..-|-. .-...|.-+..-|..| |.||++=+++.||
T Consensus 357 ~~~~~~~~~~g~nte~~K~YIDFAA~~G~eyvLveGw-D~GW~~~~~~~~~~~fd~~~p~pd~D-l~eL~~YA~sKGV 432 (738)
T 2d73_A 357 YSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLVEGW-NEGWEDWFGNSKDYVFDFVTPYPDFD-VKEIHRYAARKGI 432 (738)
T ss_dssp GGGSCBCSCBCCCHHHHHHHHHHHHHTTCSEEEECSC-BTTGGGCSSSCCSSCCCSSCBCTTCC-HHHHHHHHHHTTC
T ss_pred ccccccCCccCCCHHHHHHHHHHHHHcCCCEEEEEec-cCCcccccCccccccccccccCCCCC-HHHHHHHHHhCCC
Confidence 44444445432 222388999999999999998322 122221110 0001112223334455 6799999998886
No 278
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=20.32 E-value=47 Score=26.33 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=23.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCeEEEeeee
Q psy1381 31 FTAEFFDANHWADILASSGAKYVVLTSKH 59 (102)
Q Consensus 31 F~p~~fDp~~Wa~l~k~aGakyvvlTtKH 59 (102)
|..-.|-..+++....++|||.||+++--
T Consensus 109 esTG~f~s~e~A~~hl~aGAkkViISaps 137 (359)
T 3ids_C 109 ESTGLFTAKAAAEGHLRGGARKVVISAPA 137 (359)
T ss_dssp ECSSSCCBHHHHTHHHHTTCCEEEESSCC
T ss_pred EeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 34556777899999999999999998754
No 279
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=20.15 E-value=98 Score=24.72 Aligned_cols=50 Identities=10% Similarity=-0.027 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCeEEEeeeecCCcccCCCCCCCCcccccCCCCCchHHHHHHHHhhc
Q psy1381 40 HWADILASSGAKYVVLTSKHHEGYTLWPSKYAFSWNSMDIGPKRDLVDYTFGNWFTG 96 (102)
Q Consensus 40 ~Wa~l~k~aGakyvvlTtKHHdGF~lW~S~~~~~~~s~~~~p~rDiv~el~~a~~~~ 96 (102)
+=++.+.++|+..+++ .-|..+.|. +.....| ..|.-..+.+++++|++.
T Consensus 296 ~~a~~l~~aGad~I~V-g~~~g~~~~--~r~~~~~----g~p~~~~l~~v~~~~~~~ 345 (503)
T 1me8_A 296 EGFRYLADAGADFIKI-GIGGGSICI--TREQKGI----GRGQATAVIDVVAERNKY 345 (503)
T ss_dssp HHHHHHHHHTCSEEEE-CSSCSTTCC--STTTTCC----CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEe-cccCCcCcc--cccccCC----CCchHHHHHHHHHHHHHH
Confidence 3456778999999998 666666552 2211111 124567888888888876
No 280
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=20.14 E-value=99 Score=21.23 Aligned_cols=21 Identities=10% Similarity=0.126 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHcCCCeEEEee
Q psy1381 37 DANHWADILASSGAKYVVLTS 57 (102)
Q Consensus 37 Dp~~Wa~l~k~aGakyvvlTt 57 (102)
|+++.++.++++|...+|++.
T Consensus 17 ~~~~~l~~~~~~Gv~~~v~~~ 37 (265)
T 2gzx_A 17 DLSEVITRAREAGVDRMFVVG 37 (265)
T ss_dssp THHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEeC
Confidence 799999999999999988875
Done!