Query psy13814
Match_columns 75
No_of_seqs 150 out of 1036
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 21:09:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 99.8 3.2E-20 1.1E-24 124.2 5.9 67 3-75 99-170 (216)
2 3tue_A Tryparedoxin peroxidase 99.8 6.2E-20 2.1E-24 123.0 5.8 67 3-75 103-174 (219)
3 4gqc_A Thiol peroxidase, perox 99.6 3.6E-16 1.2E-20 98.9 6.0 66 3-72 80-145 (164)
4 3mng_A Peroxiredoxin-5, mitoch 99.6 2.9E-15 1E-19 96.1 6.5 70 3-75 92-164 (173)
5 4g2e_A Peroxiredoxin; redox pr 99.6 3.7E-15 1.3E-19 93.2 6.8 67 3-72 77-143 (157)
6 1xcc_A 1-Cys peroxiredoxin; un 99.6 3.2E-15 1.1E-19 98.9 5.7 63 12-74 92-154 (220)
7 1prx_A HORF6; peroxiredoxin, h 99.6 6.7E-15 2.3E-19 97.5 6.3 62 13-74 96-157 (224)
8 2v2g_A Peroxiredoxin 6; oxidor 99.5 7.5E-15 2.6E-19 98.2 5.1 61 14-74 93-153 (233)
9 4eo3_A Bacterioferritin comigr 99.5 1.2E-14 4.2E-19 101.0 5.9 60 3-73 67-126 (322)
10 2xhf_A Peroxiredoxin 5; oxidor 99.5 1.8E-14 6E-19 93.1 3.8 65 3-71 90-156 (171)
11 3a2v_A Probable peroxiredoxin; 99.5 8.5E-14 2.9E-18 94.2 6.1 57 13-74 94-150 (249)
12 4f82_A Thioredoxin reductase; 99.4 1.9E-13 6.6E-18 88.8 6.0 67 3-74 96-164 (176)
13 1xiy_A Peroxiredoxin, pfaop; a 99.4 2.2E-13 7.6E-18 88.5 5.9 64 3-70 93-157 (182)
14 3tjj_A Peroxiredoxin-4; thiore 99.4 1.1E-12 3.7E-17 88.5 5.9 55 14-74 154-208 (254)
15 3keb_A Probable thiol peroxida 99.3 2E-12 7E-17 86.6 6.3 65 3-72 95-161 (224)
16 3qpm_A Peroxiredoxin; oxidored 99.3 2.6E-12 9E-17 85.7 5.8 55 14-74 140-194 (240)
17 3uma_A Hypothetical peroxiredo 99.2 1.1E-11 3.8E-16 80.0 5.4 67 3-73 105-173 (184)
18 2pn8_A Peroxiredoxin-4; thiore 99.2 1.5E-11 5.3E-16 80.2 6.0 55 14-74 111-165 (211)
19 3ixr_A Bacterioferritin comigr 99.2 7.1E-12 2.4E-16 79.5 3.6 66 3-71 98-163 (179)
20 1n8j_A AHPC, alkyl hydroperoxi 99.2 3.4E-11 1.2E-15 76.9 6.5 63 4-74 78-144 (186)
21 1tp9_A Peroxiredoxin, PRX D (t 99.2 5.3E-11 1.8E-15 74.3 6.6 66 3-73 84-151 (162)
22 2wfc_A Peroxiredoxin 5, PRDX5; 99.2 5.7E-11 2E-15 75.2 6.1 68 3-75 80-150 (167)
23 2i81_A 2-Cys peroxiredoxin; st 99.2 5.8E-11 2E-15 77.6 6.2 54 14-74 115-168 (213)
24 2pwj_A Mitochondrial peroxired 99.2 6.8E-11 2.3E-15 74.9 6.1 68 3-74 92-161 (171)
25 3gkn_A Bacterioferritin comigr 99.1 2.2E-11 7.6E-16 75.1 3.3 66 3-71 82-147 (163)
26 3p7x_A Probable thiol peroxida 99.1 8.3E-11 2.8E-15 73.3 5.9 60 3-70 90-151 (166)
27 1uul_A Tryparedoxin peroxidase 99.1 7.3E-11 2.5E-15 75.8 5.6 55 14-74 99-153 (202)
28 1zye_A Thioredoxin-dependent p 99.1 9.7E-11 3.3E-15 76.7 6.3 55 14-74 119-173 (220)
29 2c0d_A Thioredoxin peroxidase 99.1 1E-10 3.5E-15 77.1 6.0 54 14-74 119-172 (221)
30 1qmv_A Human thioredoxin perox 99.1 1.6E-10 5.3E-15 73.9 5.9 55 14-74 97-151 (197)
31 1nm3_A Protein HI0572; hybrid, 99.1 2E-10 6.7E-15 75.5 6.5 66 3-72 82-148 (241)
32 2h01_A 2-Cys peroxiredoxin; th 99.0 2.4E-10 8.1E-15 72.7 5.0 54 14-74 94-147 (192)
33 1psq_A Probable thiol peroxida 99.0 6.6E-10 2.3E-14 69.0 6.3 58 3-68 87-146 (163)
34 3zrd_A Thiol peroxidase; oxido 99.0 1E-09 3.6E-14 71.0 7.3 61 3-68 123-185 (200)
35 1q98_A Thiol peroxidase, TPX; 99.0 2.5E-09 8.7E-14 66.5 7.6 58 4-66 89-148 (165)
36 1we0_A Alkyl hydroperoxide red 98.9 3.2E-09 1.1E-13 67.0 7.5 55 14-74 91-145 (187)
37 3ztl_A Thioredoxin peroxidase; 98.9 1.5E-09 5.2E-14 71.0 6.0 54 14-73 132-185 (222)
38 3drn_A Peroxiredoxin, bacterio 98.9 2E-09 6.7E-14 66.6 4.7 58 3-70 76-133 (161)
39 2yzh_A Probable thiol peroxida 98.9 4.9E-09 1.7E-13 65.3 6.0 60 4-69 93-154 (171)
40 2jsy_A Probable thiol peroxida 98.8 1.6E-08 5.6E-13 62.4 7.1 56 4-67 90-147 (167)
41 1xvw_A Hypothetical protein RV 98.8 6.6E-09 2.3E-13 63.5 4.9 59 4-70 84-144 (160)
42 1xvq_A Thiol peroxidase; thior 98.7 3E-08 1E-12 62.2 6.8 58 4-66 89-147 (175)
43 1zof_A Alkyl hydroperoxide-red 98.7 1.7E-08 5.8E-13 64.3 5.7 54 13-73 95-148 (198)
44 2bmx_A Alkyl hydroperoxidase C 98.7 2.7E-08 9.2E-13 63.3 6.6 53 14-73 105-157 (195)
45 2a4v_A Peroxiredoxin DOT5; yea 98.7 1.4E-08 4.7E-13 62.5 4.9 55 3-66 81-135 (159)
46 3u5r_E Uncharacterized protein 98.5 1.5E-07 5.1E-12 61.1 5.0 52 4-69 114-165 (218)
47 3eyt_A Uncharacterized protein 98.5 2.9E-07 9.9E-12 55.8 5.7 50 4-67 83-137 (158)
48 3lor_A Thiol-disulfide isomera 98.5 3.1E-07 1.1E-11 55.6 5.5 51 4-68 85-141 (160)
49 3hdc_A Thioredoxin family prot 98.5 6E-07 2.1E-11 54.8 6.6 45 12-68 92-136 (158)
50 4evm_A Thioredoxin family prot 98.4 8.8E-07 3E-11 51.5 6.7 44 12-67 80-124 (138)
51 3erw_A Sporulation thiol-disul 98.4 6E-07 2E-11 53.1 6.0 50 4-67 85-134 (145)
52 3fw2_A Thiol-disulfide oxidore 98.4 4.8E-07 1.6E-11 54.7 5.0 48 4-65 84-134 (150)
53 3gl3_A Putative thiol:disulfid 98.4 1E-06 3.5E-11 52.9 6.2 44 12-67 82-125 (152)
54 3kcm_A Thioredoxin family prot 98.4 9.2E-07 3.2E-11 53.2 5.9 51 4-68 77-127 (154)
55 2f9s_A Thiol-disulfide oxidore 98.3 8.6E-07 2.9E-11 53.4 5.2 49 4-66 74-122 (151)
56 2cvb_A Probable thiol-disulfid 98.3 5.8E-07 2E-11 56.2 4.6 47 4-64 87-133 (188)
57 2b5x_A YKUV protein, TRXY; thi 98.3 1.4E-06 4.8E-11 51.6 5.9 50 4-67 81-130 (148)
58 3kh7_A Thiol:disulfide interch 98.3 1.5E-06 5.3E-11 54.3 5.8 51 4-68 102-153 (176)
59 2lrn_A Thiol:disulfide interch 98.3 9.7E-07 3.3E-11 53.4 4.3 42 12-65 83-127 (152)
60 2ywi_A Hypothetical conserved 98.3 1.1E-06 3.6E-11 55.2 4.5 44 12-67 107-150 (196)
61 3lwa_A Secreted thiol-disulfid 98.3 1.1E-06 3.7E-11 54.8 4.5 53 4-67 114-166 (183)
62 1lu4_A Soluble secreted antige 98.2 1.7E-06 5.9E-11 50.7 4.8 47 4-65 70-116 (136)
63 4h86_A Peroxiredoxin type-2; o 98.2 2E-06 6.9E-11 56.8 5.5 60 5-68 121-182 (199)
64 3ia1_A THIO-disulfide isomeras 98.2 1.9E-06 6.5E-11 51.9 5.0 50 4-67 77-129 (154)
65 3ewl_A Uncharacterized conserv 98.2 2.7E-06 9.4E-11 50.5 5.2 44 5-62 79-124 (142)
66 2ggt_A SCO1 protein homolog, m 98.2 2.2E-06 7.4E-11 52.0 4.8 62 4-67 79-146 (164)
67 1jfu_A Thiol:disulfide interch 98.2 2.1E-06 7.2E-11 53.5 4.8 55 4-68 109-164 (186)
68 1xzo_A BSSCO, hypothetical pro 98.2 2.7E-06 9.4E-11 52.1 5.3 61 4-68 87-156 (174)
69 2l5o_A Putative thioredoxin; s 98.2 2.9E-06 1E-10 50.9 4.9 49 4-66 77-125 (153)
70 2rli_A SCO2 protein homolog, m 98.1 8.2E-06 2.8E-10 49.8 6.5 62 4-67 82-149 (171)
71 2h30_A Thioredoxin, peptide me 98.1 9.1E-06 3.1E-10 49.2 6.6 43 12-66 97-140 (164)
72 3fkf_A Thiol-disulfide oxidore 98.1 4.4E-06 1.5E-10 49.5 5.0 42 12-65 88-132 (148)
73 3raz_A Thioredoxin-related pro 98.1 3.2E-06 1.1E-10 51.0 4.0 53 3-67 70-125 (151)
74 1zzo_A RV1677; thioredoxin fol 98.1 9.5E-06 3.3E-10 47.2 6.0 41 12-65 77-118 (136)
75 2b1k_A Thiol:disulfide interch 98.1 5.9E-06 2E-10 50.5 5.2 49 4-66 95-144 (168)
76 1kng_A Thiol:disulfide interch 98.0 9.1E-06 3.1E-10 48.7 5.4 43 12-66 93-136 (156)
77 3hcz_A Possible thiol-disulfid 98.0 3.8E-06 1.3E-10 49.8 3.6 42 12-65 85-129 (148)
78 4fo5_A Thioredoxin-like protei 98.0 5.2E-06 1.8E-10 49.6 4.1 42 12-65 86-131 (143)
79 2k6v_A Putative cytochrome C o 98.0 3.7E-06 1.3E-10 51.3 3.4 60 4-66 90-155 (172)
80 2hyx_A Protein DIPZ; thioredox 98.0 8.3E-06 2.8E-10 57.3 5.4 50 4-67 135-184 (352)
81 2lrt_A Uncharacterized protein 98.0 5.4E-06 1.8E-10 50.5 3.6 40 14-65 89-131 (152)
82 3ha9_A Uncharacterized thiored 98.0 6.7E-06 2.3E-10 50.2 4.0 38 12-62 107-145 (165)
83 2ls5_A Uncharacterized protein 97.2 1.3E-06 4.4E-11 53.1 0.0 44 12-65 89-132 (159)
84 3or5_A Thiol:disulfide interch 97.9 1.6E-05 5.4E-10 48.1 4.6 49 12-67 88-136 (165)
85 3eur_A Uncharacterized protein 97.8 3.2E-05 1.1E-09 46.1 5.1 42 12-65 88-131 (142)
86 3cmi_A Peroxiredoxin HYR1; thi 97.8 4.4E-06 1.5E-10 51.6 0.7 55 12-66 93-152 (171)
87 2b7k_A SCO1 protein; metalloch 97.7 5.8E-05 2E-09 48.1 5.1 62 4-67 96-164 (200)
88 2gs3_A PHGPX, GPX-4, phospholi 97.6 1.9E-05 6.6E-10 49.5 2.1 61 4-66 104-170 (185)
89 2obi_A PHGPX, GPX-4, phospholi 97.6 4.5E-05 1.5E-09 47.6 3.8 62 3-66 101-168 (183)
90 3me7_A Putative uncharacterize 97.6 7.6E-05 2.6E-09 46.4 4.5 41 23-66 105-145 (170)
91 2lja_A Putative thiol-disulfid 97.5 0.00013 4.3E-09 43.5 4.2 40 13-64 85-125 (152)
92 2v1m_A Glutathione peroxidase; 97.5 7.1E-05 2.4E-09 45.4 2.9 55 12-66 93-151 (169)
93 2lus_A Thioredoxion; CR-Trp16, 96.5 2.4E-05 8.2E-10 46.2 0.0 41 17-69 90-130 (143)
94 2r37_A Glutathione peroxidase 97.4 7.9E-05 2.7E-09 48.4 2.4 19 48-66 159-177 (207)
95 2i3y_A Epididymal secretory gl 97.3 9.3E-05 3.2E-09 48.5 2.4 19 48-66 177-195 (215)
96 2vup_A Glutathione peroxidase- 97.3 7.4E-05 2.5E-09 47.0 1.8 59 4-66 103-169 (190)
97 3dwv_A Glutathione peroxidase- 97.2 0.00022 7.5E-09 44.7 3.1 52 13-66 109-167 (187)
98 2p31_A CL683, glutathione pero 97.0 0.00011 3.9E-09 45.8 -0.0 17 50-66 149-165 (181)
99 1i5g_A Tryparedoxin II; electr 96.9 0.00046 1.6E-08 40.9 2.3 37 16-64 88-126 (144)
100 2p5q_A Glutathione peroxidase 96.9 0.00046 1.6E-08 41.7 2.3 52 13-66 95-152 (170)
101 2f8a_A Glutathione peroxidase 96.8 0.0031 1.1E-07 40.5 5.7 19 48-66 173-191 (208)
102 1o8x_A Tryparedoxin, TRYX, TXN 96.8 0.00057 2E-08 40.6 2.0 37 16-64 88-126 (146)
103 3kij_A Probable glutathione pe 96.6 0.00026 8.9E-09 44.0 -0.4 18 50-67 138-155 (180)
104 1o73_A Tryparedoxin; electron 96.5 0.0012 4.1E-08 38.8 1.9 37 16-64 88-126 (144)
105 4hde_A SCO1/SENC family lipopr 96.4 0.023 8E-07 35.1 7.6 19 47-65 133-151 (170)
106 3s9f_A Tryparedoxin; thioredox 96.3 0.0018 6E-08 39.8 2.0 37 16-64 108-146 (165)
107 2l57_A Uncharacterized protein 95.2 0.071 2.4E-06 30.6 5.9 42 13-66 57-101 (126)
108 2ju5_A Thioredoxin disulfide i 94.3 0.039 1.3E-06 33.3 3.3 31 22-64 103-133 (154)
109 2kuc_A Putative disulphide-iso 94.3 0.11 3.6E-06 29.8 5.0 32 23-66 74-105 (130)
110 3fk8_A Disulphide isomerase; A 93.3 0.13 4.3E-06 29.7 4.1 36 22-66 75-110 (133)
111 2fwh_A Thiol:disulfide interch 90.4 0.13 4.4E-06 30.1 1.8 28 22-61 78-105 (134)
112 2l5l_A Thioredoxin; structural 88.9 0.91 3.1E-05 26.3 4.8 37 13-61 69-106 (136)
113 1nsw_A Thioredoxin, TRX; therm 88.4 1.9 6.4E-05 23.2 5.8 40 13-65 48-88 (105)
114 1thx_A Thioredoxin, thioredoxi 87.4 2.3 7.8E-05 23.1 5.9 40 13-65 56-96 (115)
115 3hxs_A Thioredoxin, TRXP; elec 87.0 1.2 4E-05 25.7 4.4 37 13-61 82-119 (141)
116 2voc_A Thioredoxin; electron t 86.3 1.1 3.7E-05 24.9 3.9 40 14-66 49-89 (112)
117 2trx_A Thioredoxin; electron t 85.4 2.6 9E-05 22.7 5.2 39 14-65 52-91 (108)
118 3q6o_A Sulfhydryl oxidase 1; p 85.2 1.4 4.8E-05 28.0 4.4 40 13-64 183-222 (244)
119 2i4a_A Thioredoxin; acidophIle 85.0 2.6 9E-05 22.6 5.0 39 14-65 52-91 (107)
120 2yzu_A Thioredoxin; redox prot 85.0 3 0.0001 22.3 5.8 41 13-66 49-90 (109)
121 3ira_A Conserved protein; meth 84.9 1.9 6.4E-05 27.1 4.8 39 18-68 79-125 (173)
122 2pu9_C TRX-F, thioredoxin F-ty 82.7 2 6.8E-05 23.6 3.9 38 15-65 56-95 (111)
123 3f9u_A Putative exported cytoc 80.8 0.66 2.3E-05 27.9 1.5 26 28-65 123-148 (172)
124 3tco_A Thioredoxin (TRXA-1); d 79.3 4.1 0.00014 21.8 4.4 41 13-66 52-93 (109)
125 1dby_A Chloroplast thioredoxin 78.3 6 0.0002 21.2 6.3 40 14-66 51-91 (107)
126 1w4v_A Thioredoxin, mitochondr 78.1 4.4 0.00015 22.6 4.4 40 13-65 62-102 (119)
127 2e0q_A Thioredoxin; electron t 77.5 6 0.0002 20.7 5.0 39 15-66 48-87 (104)
128 3kol_A Oxidoreductase, glyoxal 76.7 3.2 0.00011 23.6 3.6 24 48-71 133-156 (156)
129 2o8v_B Thioredoxin 1; disulfid 76.0 2.8 9.4E-05 24.1 3.1 39 14-65 72-111 (128)
130 2qnt_A AGR_C_3434P, uncharacte 74.8 3.7 0.00013 23.2 3.5 27 48-74 109-135 (141)
131 1t00_A Thioredoxin, TRX; redox 74.8 8 0.00027 20.9 5.8 40 13-65 54-94 (112)
132 1ep7_A Thioredoxin CH1, H-type 73.9 4.1 0.00014 22.1 3.4 39 14-65 56-95 (112)
133 1oaz_A Thioredoxin 1; immune s 73.9 3.3 0.00011 23.6 3.1 40 14-66 67-107 (123)
134 3die_A Thioredoxin, TRX; elect 73.6 8.2 0.00028 20.4 6.0 41 13-66 50-91 (106)
135 2l6c_A Thioredoxin; oxidoreduc 73.4 6.6 0.00023 21.5 4.3 40 14-66 50-90 (110)
136 3d22_A TRXH4, thioredoxin H-ty 73.3 5.1 0.00018 22.8 3.9 39 14-65 77-116 (139)
137 3t58_A Sulfhydryl oxidase 1; o 73.3 4.2 0.00014 29.6 4.1 40 13-64 183-222 (519)
138 3emx_A Thioredoxin; structural 72.8 2.7 9.1E-05 24.3 2.5 33 22-67 79-111 (135)
139 2es7_A Q8ZP25_salty, putative 72.8 2.2 7.4E-05 25.5 2.2 34 19-65 75-108 (142)
140 2wz9_A Glutaredoxin-3; protein 72.4 5.5 0.00019 23.4 3.9 39 14-65 63-102 (153)
141 2vlu_A Thioredoxin, thioredoxi 71.5 5.3 0.00018 22.1 3.5 38 15-65 66-104 (122)
142 3ul3_B Thioredoxin, thioredoxi 70.7 5.7 0.00019 22.4 3.6 39 14-65 74-113 (128)
143 3zzx_A Thioredoxin; oxidoreduc 70.6 5.4 0.00019 22.3 3.5 34 19-65 57-90 (105)
144 1faa_A Thioredoxin F; electron 70.4 4.9 0.00017 22.3 3.2 38 15-65 69-108 (124)
145 3f3q_A Thioredoxin-1; His TAG, 70.1 9.6 0.00033 20.8 4.4 38 15-65 56-94 (109)
146 3qfa_C Thioredoxin; protein-pr 69.7 10 0.00034 21.0 4.5 38 15-65 63-101 (116)
147 3ey7_A Biphenyl-2,3-DIOL 1,2-d 69.7 6.5 0.00022 21.6 3.7 21 48-68 112-132 (133)
148 1xfl_A Thioredoxin H1; AT3G510 69.5 7.3 0.00025 22.0 3.9 39 14-65 69-108 (124)
149 3cxg_A Putative thioredoxin; m 69.3 6 0.00021 22.7 3.5 33 21-65 78-113 (133)
150 1ecs_A Bleomycin resistance pr 69.0 6.5 0.00022 21.9 3.6 25 48-72 101-125 (126)
151 3gnj_A Thioredoxin domain prot 68.6 11 0.00038 20.1 4.5 41 13-66 53-94 (111)
152 4gym_A Glyoxalase/bleomycin re 68.2 6.9 0.00023 22.5 3.7 21 48-68 115-136 (149)
153 1xwb_A Thioredoxin; dimerizati 68.0 7.3 0.00025 20.6 3.5 39 14-65 52-91 (106)
154 1fb6_A Thioredoxin M; electron 66.7 12 0.00041 19.7 4.8 41 13-66 49-90 (105)
155 3p2a_A Thioredoxin 2, putative 66.6 15 0.0005 21.1 4.9 40 13-65 86-126 (148)
156 2dml_A Protein disulfide-isome 65.6 5.2 0.00018 22.4 2.7 35 14-60 67-102 (130)
157 3gix_A Thioredoxin-like protei 65.3 18 0.00062 21.2 5.4 36 15-63 56-92 (149)
158 1v98_A Thioredoxin; oxidoreduc 63.8 18 0.0006 20.5 4.9 40 14-66 82-122 (140)
159 2oe3_A Thioredoxin-3; electron 63.8 12 0.0004 20.8 4.0 38 15-65 62-100 (114)
160 3hz4_A Thioredoxin; NYSGXRC, P 63.7 18 0.00062 20.6 5.2 41 13-66 55-96 (140)
161 2ppt_A Thioredoxin-2; thiredox 63.5 13 0.00046 21.9 4.4 40 14-66 96-136 (155)
162 2i1u_A Thioredoxin, TRX, MPT46 63.3 16 0.00055 19.8 5.8 40 13-65 61-101 (121)
163 4euy_A Uncharacterized protein 62.7 11 0.00036 20.3 3.6 40 14-66 49-89 (105)
164 1syr_A Thioredoxin; SGPP, stru 62.5 10 0.00035 20.6 3.5 39 14-65 57-96 (112)
165 1gh2_A Thioredoxin-like protei 62.1 13 0.00045 19.9 3.9 39 14-65 52-91 (107)
166 1x5d_A Protein disulfide-isome 61.9 10 0.00035 21.0 3.5 38 14-64 61-99 (133)
167 3m9j_A Thioredoxin; oxidoreduc 61.9 14 0.00049 19.4 4.0 38 15-65 52-90 (105)
168 3rri_A Glyoxalase/bleomycin re 61.8 9.5 0.00032 21.2 3.3 22 47-68 109-130 (135)
169 3fcd_A Lyase, ORF125EGC139; la 61.5 14 0.0005 20.7 4.2 23 47-69 105-127 (134)
170 2vm1_A Thioredoxin, thioredoxi 61.4 14 0.00048 19.9 4.0 39 14-65 59-98 (118)
171 2xc2_A Thioredoxinn; oxidoredu 61.4 13 0.00046 20.2 3.9 39 14-65 63-102 (117)
172 1u07_A TONB protein; beta-hair 60.0 12 0.00043 20.3 3.5 20 46-65 25-44 (90)
173 2lst_A Thioredoxin; structural 64.4 1.9 6.4E-05 24.4 0.0 26 23-60 66-92 (130)
174 3d6i_A Monothiol glutaredoxin- 59.5 14 0.00047 19.9 3.7 39 14-65 54-93 (112)
175 4hi4_A Aerotaxis transducer AE 59.3 6.3 0.00022 21.6 2.2 17 48-64 15-31 (121)
176 3a0s_A Sensor protein; PAS-fol 58.7 7 0.00024 18.9 2.2 14 50-63 4-17 (96)
177 3uvt_A Thioredoxin domain-cont 58.4 18 0.0006 19.2 4.0 39 14-65 56-95 (111)
178 3b33_A Sensor protein; structu 58.4 9.1 0.00031 20.1 2.7 16 48-63 17-32 (115)
179 3apq_A DNAJ homolog subfamily 58.3 17 0.00057 22.3 4.3 38 13-63 145-183 (210)
180 3bqx_A Glyoxalase-related enzy 57.6 13 0.00044 21.3 3.5 21 48-68 108-128 (150)
181 2f51_A Thioredoxin; electron t 57.1 8.5 0.00029 21.5 2.6 40 14-65 54-97 (118)
182 1r26_A Thioredoxin; redox-acti 57.1 17 0.00057 20.6 3.9 39 14-65 68-107 (125)
183 3qou_A Protein YBBN; thioredox 57.1 13 0.00046 23.7 3.8 40 14-66 58-98 (287)
184 2rk0_A Glyoxalase/bleomycin re 56.3 16 0.00053 20.4 3.7 20 49-68 110-129 (136)
185 1ti3_A Thioredoxin H, PTTRXH1; 56.3 12 0.0004 20.1 3.0 39 14-65 57-96 (113)
186 3huh_A Virulence protein STM31 56.3 13 0.00045 21.2 3.4 21 48-68 125-145 (152)
187 4fu0_A D-alanine--D-alanine li 56.2 22 0.00074 24.0 4.9 23 47-69 295-317 (357)
188 1x5e_A Thioredoxin domain cont 55.7 10 0.00035 21.1 2.7 34 14-60 55-89 (126)
189 2j23_A Thioredoxin; immune pro 55.0 24 0.00084 19.4 4.3 38 15-65 67-105 (121)
190 2vim_A Thioredoxin, TRX; thior 54.6 21 0.00073 18.6 3.9 39 14-65 50-89 (104)
191 3zw5_A Glyoxalase domain-conta 54.3 15 0.00051 21.0 3.4 19 48-66 129-147 (147)
192 3olo_A Two-component sensor hi 54.1 12 0.0004 19.4 2.7 15 49-63 24-38 (118)
193 3sk2_A EHPR; antibiotic resist 54.1 17 0.00057 20.3 3.5 17 49-65 114-130 (132)
194 1f9z_A Glyoxalase I; beta-alph 53.8 16 0.00053 20.1 3.3 20 48-67 108-127 (135)
195 3fg8_A Uncharacterized protein 53.7 12 0.0004 20.2 2.7 16 48-63 22-37 (118)
196 2k9k_A TONB2; metal transport; 51.8 15 0.0005 20.6 3.0 20 46-65 40-59 (106)
197 2rbb_A Glyoxalase/bleomycin re 51.4 18 0.0006 20.4 3.4 20 48-67 114-133 (141)
198 3g12_A Putative lactoylglutath 51.3 13 0.00046 20.9 2.8 21 48-69 103-123 (128)
199 2a4x_A Mitomycin-binding prote 51.0 19 0.00064 20.2 3.4 20 48-67 110-129 (138)
200 4exo_A Methyl-accepting chemot 50.8 6.8 0.00023 23.3 1.5 24 51-74 60-83 (146)
201 1r9c_A Glutathione transferase 50.4 16 0.00054 20.5 3.0 21 47-67 103-123 (139)
202 2yj7_A LPBCA thioredoxin; oxid 55.4 3.4 0.00012 21.8 0.0 31 21-64 59-89 (106)
203 3r4q_A Lactoylglutathione lyas 49.8 19 0.00063 21.0 3.3 21 47-67 113-133 (160)
204 2gj3_A Nitrogen fixation regul 49.7 15 0.00051 19.6 2.7 15 49-63 16-30 (120)
205 3itw_A Protein TIOX; bleomycin 49.4 21 0.0007 19.9 3.4 21 48-68 104-124 (137)
206 3fc7_A HTR-like protein, senso 49.2 12 0.00039 19.7 2.2 17 47-63 28-44 (125)
207 3rhe_A NAD-dependent benzaldeh 48.9 20 0.0007 20.8 3.4 20 49-68 106-125 (148)
208 2p7o_A Glyoxalase family prote 48.8 20 0.00069 19.7 3.3 21 48-68 104-124 (133)
209 1ll8_A PAS kinase; PAS domain, 48.7 12 0.00042 19.7 2.2 16 48-63 8-24 (114)
210 1z6n_A Hypothetical protein PA 48.6 11 0.00037 23.1 2.2 42 14-64 85-127 (167)
211 3er7_A Uncharacterized NTF2-li 48.4 20 0.00067 21.2 3.3 24 48-71 101-124 (131)
212 2dj0_A Thioredoxin-related tra 48.4 35 0.0012 19.2 4.8 45 14-65 59-104 (137)
213 2qqz_A Glyoxalase family prote 47.5 25 0.00085 19.2 3.5 18 48-65 106-123 (126)
214 2r78_A Sensor protein; sensory 47.3 17 0.00057 19.5 2.7 15 49-63 22-36 (117)
215 3r6a_A Uncharacterized protein 47.0 24 0.00082 20.4 3.5 19 49-67 101-119 (144)
216 2qgv_A Hydrogenase-1 operon pr 46.9 15 0.00051 22.3 2.6 47 7-66 61-109 (140)
217 2qsi_A Putative hydrogenase ex 46.6 28 0.00095 21.0 3.8 42 13-67 66-108 (137)
218 2vv6_A FIXL, sensor protein FI 46.6 13 0.00045 19.7 2.2 14 50-63 5-18 (119)
219 3mfx_A Sensory BOX/ggdef famil 46.5 13 0.00043 21.3 2.2 16 48-63 17-32 (129)
220 1ilo_A Conserved hypothetical 46.3 27 0.00092 17.3 3.7 25 24-63 39-63 (77)
221 2p25_A Glyoxalase family prote 46.3 22 0.00075 19.0 3.1 16 48-63 109-124 (126)
222 3lif_A Putative diguanylate cy 46.3 16 0.00053 22.7 2.7 25 49-74 167-191 (254)
223 4g6x_A Glyoxalase/bleomycin re 46.1 22 0.00077 20.5 3.3 19 48-66 133-151 (155)
224 1nho_A Probable thioredoxin; b 46.0 19 0.00064 18.1 2.6 32 14-60 33-65 (85)
225 1xrk_A Bleomycin resistance pr 45.7 26 0.00087 19.3 3.4 17 49-65 104-120 (124)
226 1qto_A Bleomycin-binding prote 44.7 26 0.00087 19.2 3.3 17 49-65 104-120 (122)
227 3aps_A DNAJ homolog subfamily 44.5 16 0.00056 19.9 2.4 35 14-60 53-88 (122)
228 3bwl_A Sensor protein; structu 44.5 20 0.00069 18.9 2.7 14 50-63 29-42 (126)
229 1npb_A Fosfomycin-resistance p 44.4 29 0.00098 19.4 3.5 20 48-67 99-118 (141)
230 2r6u_A Uncharacterized protein 44.0 28 0.00097 20.0 3.5 19 49-67 127-145 (148)
231 2dlx_A UBX domain-containing p 44.0 20 0.00067 21.7 2.8 29 24-64 90-119 (153)
232 2rk9_A Glyoxalase/bleomycin re 43.1 29 0.00098 19.6 3.4 20 48-67 117-136 (145)
233 1oh0_A Steroid delta-isomerase 42.5 28 0.00095 19.1 3.2 19 50-68 103-121 (131)
234 2pjs_A AGR_C_3564P, uncharacte 42.1 31 0.0011 18.4 3.3 17 48-64 100-116 (119)
235 3l7t_A SMU.1112C, putative unc 42.0 28 0.00095 18.7 3.1 16 48-63 117-132 (134)
236 3e5d_A Putative glyoxalase I; 41.9 27 0.00093 18.8 3.0 16 48-63 110-125 (127)
237 1xqa_A Glyoxalase/bleomycin re 41.8 19 0.00066 19.2 2.4 16 48-63 96-111 (113)
238 3h79_A Thioredoxin-like protei 41.5 26 0.0009 19.4 3.0 35 14-60 70-105 (127)
239 3bt3_A Glyoxalase-related enzy 41.3 31 0.0011 19.6 3.4 18 48-65 126-143 (148)
240 3mxq_A Sensor protein; PSI2, M 41.1 17 0.00057 21.7 2.2 15 49-63 33-47 (152)
241 3vol_A Aerotaxis transducer AE 41.0 16 0.00055 23.0 2.2 17 48-64 32-48 (233)
242 2qkp_A Uncharacterized protein 40.7 17 0.00059 21.5 2.2 18 49-66 30-47 (151)
243 3ghj_A Putative integron gene 40.6 32 0.0011 19.5 3.3 18 47-64 122-139 (141)
244 1d06_A Nitrogen fixation regul 40.5 19 0.00063 19.5 2.2 15 49-63 27-41 (130)
245 3ct8_A Protein BH2160, putativ 39.9 28 0.00096 19.9 3.0 17 48-64 128-144 (146)
246 3cwf_A Alkaline phosphatase sy 39.7 15 0.00052 20.6 1.7 15 50-64 50-64 (122)
247 1nki_A Probable fosfomycin res 39.7 28 0.00096 19.3 2.9 19 48-66 96-114 (135)
248 1p0z_A Sensor kinase CITA; tra 39.6 9.8 0.00033 22.0 0.9 24 50-74 52-75 (131)
249 2dj1_A Protein disulfide-isome 39.3 33 0.0011 19.1 3.2 32 15-59 70-102 (140)
250 4hc5_A Glyoxalase/bleomycin re 39.1 30 0.001 18.7 2.9 16 49-64 116-131 (133)
251 2i7r_A Conserved domain protei 38.7 25 0.00085 18.9 2.5 18 48-65 99-116 (118)
252 1twu_A Hypothetical protein YY 38.7 41 0.0014 18.7 3.5 20 50-69 117-136 (139)
253 3luq_A Sensor protein; PAS, hi 38.5 22 0.00077 17.9 2.2 15 49-63 14-28 (114)
254 3lyx_A Sensory BOX/ggdef domai 38.5 23 0.00077 17.7 2.2 16 48-63 17-32 (124)
255 1wou_A Thioredoxin -related pr 38.3 51 0.0017 18.2 4.5 26 22-59 79-104 (123)
256 3mjq_A Uncharacterized protein 37.7 22 0.00077 18.4 2.2 16 48-63 9-24 (126)
257 2qhk_A Methyl-accepting chemot 37.4 14 0.00049 22.2 1.5 24 51-74 67-90 (174)
258 3ihg_A RDME; flavoenzyme, anth 36.8 34 0.0012 24.1 3.5 21 46-66 496-516 (535)
259 1ohp_A Steroid delta-isomerase 35.6 42 0.0015 17.8 3.2 22 48-69 97-118 (125)
260 3h3h_A Uncharacterized snoal-l 35.6 40 0.0014 18.6 3.1 18 49-66 102-119 (122)
261 2vlg_A Sporulation kinase A; h 35.2 33 0.0011 19.0 2.7 16 49-64 10-25 (111)
262 3ph9_A Anterior gradient prote 34.9 11 0.00038 22.8 0.6 17 47-63 100-116 (151)
263 3hkx_A Amidase; alpha-beta-BET 34.9 83 0.0028 20.4 5.0 18 47-64 112-129 (283)
264 2zyz_A Putative uncharacterize 34.7 44 0.0015 19.7 3.2 26 49-74 85-111 (116)
265 3uh9_A Metallothiol transferas 34.5 38 0.0013 19.0 2.9 20 47-66 100-119 (145)
266 1a8l_A Protein disulfide oxido 34.2 57 0.002 19.7 3.9 39 14-65 170-209 (226)
267 3iv4_A Putative oxidoreductase 34.2 52 0.0018 19.1 3.5 29 26-66 71-99 (112)
268 3ub6_A Chemoreceptor TLPB; hom 33.8 13 0.00046 23.0 0.9 25 50-74 71-95 (181)
269 3hdp_A Glyoxalase-I; glutathio 33.3 36 0.0012 18.6 2.7 16 48-63 115-130 (133)
270 1w63_Q Adapter-related protein 33.3 60 0.0021 19.6 3.9 21 49-69 3-23 (158)
271 1zma_A Bacterocin transport ac 33.1 29 0.00099 18.9 2.2 26 25-63 77-102 (118)
272 2k8s_A Thioredoxin; dimer, str 32.8 52 0.0018 16.7 5.2 37 13-64 29-69 (80)
273 2jhe_A Transcription regulator 32.5 33 0.0011 20.0 2.5 15 49-63 91-105 (190)
274 3t58_A Sulfhydryl oxidase 1; o 32.4 53 0.0018 23.8 3.9 38 14-63 65-108 (519)
275 2kjz_A ATC0852; protein of unk 32.3 43 0.0015 19.1 3.0 17 49-65 125-141 (144)
276 2grx_C Protein TONB; beta barr 32.2 39 0.0013 22.2 3.0 21 46-66 164-184 (229)
277 1iow_A DD-ligase, DDLB, D-ALA\ 32.1 97 0.0033 19.6 5.1 25 47-71 253-277 (306)
278 1ss4_A Glyoxalase family prote 32.1 34 0.0012 19.0 2.4 19 48-66 131-149 (153)
279 3mg1_A OCP, orange carotenoid 31.9 37 0.0013 23.7 2.9 20 47-66 285-304 (323)
280 3tqt_A D-alanine--D-alanine li 31.9 88 0.003 21.4 4.9 23 47-69 299-321 (372)
281 1sen_A Thioredoxin-like protei 31.4 23 0.0008 21.0 1.7 19 47-65 103-121 (164)
282 3vot_A L-amino acid ligase, BL 31.4 87 0.003 21.3 4.8 25 47-71 269-293 (425)
283 3tjz_C Coatomer subunit zeta-1 31.4 53 0.0018 20.0 3.3 22 47-68 12-33 (153)
284 2vgl_S AP-2 complex subunit si 31.3 42 0.0014 19.8 2.8 19 49-67 3-21 (142)
285 3f1p_A Endothelial PAS domain- 31.2 45 0.0015 17.3 2.7 16 48-63 9-24 (117)
286 3m2o_A Glyoxalase/bleomycin re 31.2 48 0.0016 19.3 3.1 19 48-66 126-144 (164)
287 3dxb_A Thioredoxin N-terminall 31.0 38 0.0013 20.9 2.7 41 13-66 61-102 (222)
288 2i87_A D-alanine-D-alanine lig 30.8 1.2E+02 0.0041 20.2 5.6 25 47-71 289-313 (364)
289 4eet_B Phototropin-2; LOV, blu 29.8 43 0.0015 16.7 2.4 16 48-63 7-25 (115)
290 3f1p_B ARYL hydrocarbon recept 29.8 47 0.0016 17.4 2.7 16 48-63 12-27 (121)
291 4eg0_A D-alanine--D-alanine li 29.7 96 0.0033 20.1 4.7 23 47-69 262-284 (317)
292 1e4e_A Vancomycin/teicoplanin 29.5 1.1E+02 0.0036 20.2 4.9 24 47-70 288-311 (343)
293 3t12_B Gliding protein MGLB; G 29.3 33 0.0011 20.7 2.1 20 47-66 25-44 (136)
294 3oxh_A RV0577 protein; kinase 29.2 77 0.0026 20.4 4.0 25 48-72 132-156 (282)
295 3dxo_A Uncharacterized snoal-l 28.8 59 0.002 18.2 3.1 18 50-67 99-116 (121)
296 2f2l_A Peptidoglycan-recogniti 27.6 27 0.00093 21.6 1.5 12 50-61 65-76 (167)
297 3by9_A Sensor protein; histidi 27.5 44 0.0015 20.4 2.6 15 49-63 164-178 (260)
298 3e5n_A D-alanine-D-alanine lig 27.5 1.1E+02 0.0039 20.8 4.9 23 47-69 317-339 (386)
299 2kdk_A ARYL hydrocarbon recept 27.4 55 0.0019 16.9 2.7 17 47-63 12-28 (121)
300 2za0_A Glyoxalase I; lyase, la 27.2 54 0.0018 19.3 2.8 20 48-67 159-178 (184)
301 3no2_A Uncharacterized protein 26.9 67 0.0023 20.5 3.4 23 50-72 245-267 (276)
302 1sk4_A Peptidoglycan recogniti 26.9 29 0.00098 21.2 1.5 15 48-62 62-76 (163)
303 2w0n_A Sensor protein DCUS; si 26.8 10 0.00034 19.6 -0.6 15 49-63 26-40 (118)
304 1nwz_A PYP, photoactive yellow 26.5 38 0.0013 20.1 2.0 35 24-63 8-42 (125)
305 3q2o_A Phosphoribosylaminoimid 26.4 1.3E+02 0.0044 20.2 4.9 23 47-69 257-279 (389)
306 2yh9_A Small protein A, BAME p 26.3 72 0.0025 17.3 3.1 25 48-72 56-80 (88)
307 2e11_A Hydrolase; dimethylarse 25.9 51 0.0017 21.0 2.7 16 49-64 215-230 (266)
308 3k3p_A D-alanine--D-alanine li 25.4 1.3E+02 0.0045 20.6 4.9 24 46-69 318-341 (383)
309 3idv_A Protein disulfide-isome 25.3 39 0.0013 20.6 2.0 34 15-61 68-102 (241)
310 1ehi_A LMDDL2, D-alanine:D-lac 25.3 1.5E+02 0.0051 20.0 5.1 24 47-70 299-322 (377)
311 1lba_A T7 lysozyme; hydrolase( 25.0 33 0.0011 20.5 1.5 15 48-62 40-54 (146)
312 3k3c_A Protein RV1364C/MT1410; 24.3 45 0.0016 18.3 2.0 15 49-63 28-43 (158)
313 1mzu_A PPR; photoactive yellow 24.0 45 0.0015 20.0 2.0 16 48-63 32-47 (129)
314 1v9y_A Heme PAS sensor protein 23.9 67 0.0023 17.3 2.7 15 49-63 51-65 (167)
315 3i12_A D-alanine-D-alanine lig 23.8 1.5E+02 0.0052 19.8 4.9 23 47-69 298-320 (364)
316 2rkq_A Peptidoglycan-recogniti 23.7 35 0.0012 20.9 1.5 15 48-62 65-79 (169)
317 2xz4_A Peptidoglycan-recogniti 23.6 36 0.0012 21.1 1.5 15 48-62 71-85 (180)
318 3t50_A Blue-light-activated hi 23.4 66 0.0023 16.6 2.5 15 49-63 8-25 (128)
319 2pr5_A Blue-light photorecepto 23.4 70 0.0024 17.1 2.7 16 48-63 9-27 (132)
320 1zsw_A Metallo protein, glyoxa 23.2 1.1E+02 0.0038 20.0 4.0 20 49-68 139-158 (338)
321 2xz8_A Peptidoglycan-recogniti 23.2 37 0.0013 20.8 1.5 11 51-61 73-83 (150)
322 3ep1_A PGRP-HD - peptidoglycan 23.1 37 0.0013 21.5 1.5 14 49-62 79-92 (176)
323 2cb3_A Peptidoglycan-recogniti 23.1 37 0.0013 21.0 1.5 15 48-62 68-82 (175)
324 3se7_A VANA; alpha-beta struct 23.0 1.5E+02 0.0052 19.6 4.7 23 47-69 288-310 (346)
325 1f89_A 32.5 kDa protein YLR351 22.8 77 0.0026 20.4 3.1 18 47-64 109-126 (291)
326 1yck_A Peptidoglycan recogniti 22.7 38 0.0013 21.0 1.5 15 48-62 72-86 (175)
327 1lr0_A TOLA protein; domain-sw 22.5 1.1E+02 0.0037 18.0 3.5 20 47-66 53-72 (129)
328 3p8k_A Hydrolase, carbon-nitro 22.4 79 0.0027 20.5 3.1 40 25-64 88-128 (281)
329 2kxe_A DNA polymerase II small 22.3 12 0.00041 20.6 -0.8 10 47-56 45-54 (75)
330 1sxr_A Peptidoglycan recogniti 22.3 40 0.0014 21.1 1.6 15 48-62 74-88 (183)
331 2w1v_A Nitrilase-2, nitrilase 22.3 81 0.0028 20.1 3.1 18 47-64 93-110 (276)
332 1uf5_A N-carbamyl-D-amino acid 22.2 81 0.0028 20.3 3.1 17 48-64 108-124 (303)
333 2f2l_X Peptidoglycan recogniti 22.0 40 0.0014 20.7 1.5 15 48-62 64-78 (167)
334 2c21_A Trypanothione-dependent 21.8 76 0.0026 17.6 2.7 19 48-66 108-127 (144)
335 3lic_A Sensor protein; PDC fol 21.7 57 0.0019 20.2 2.3 14 50-63 182-195 (274)
336 3c8c_A Methyl-accepting chemot 21.7 46 0.0016 19.8 1.7 15 49-63 160-174 (240)
337 1lgt_A Biphenyl-2,3-DIOL 1,2-d 21.6 1.5E+02 0.0051 18.7 4.3 22 47-68 99-120 (297)
338 2hls_A Protein disulfide oxido 21.5 94 0.0032 19.6 3.3 33 14-61 174-207 (243)
339 1wmj_A Thioredoxin H-type; str 21.4 25 0.00084 19.3 0.4 29 21-62 75-103 (130)
340 2a15_A Hypothetical protein RV 21.4 98 0.0034 17.1 3.1 19 50-68 111-129 (139)
341 2zyq_A Probable biphenyl-2,3-D 21.3 1.1E+02 0.0037 19.4 3.6 21 48-68 252-272 (300)
342 3hpy_A Catechol 2,3-dioxygenas 21.1 90 0.0031 20.0 3.2 23 47-69 104-126 (309)
343 1mek_A Protein disulfide isome 20.9 40 0.0014 17.8 1.2 28 21-61 67-94 (120)
344 3mso_A Steroid delta-isomerase 20.7 77 0.0026 18.4 2.6 17 51-67 101-117 (143)
345 2djk_A PDI, protein disulfide- 20.6 1.2E+02 0.004 17.0 3.4 46 5-60 45-92 (133)
346 3cax_A Uncharacterized protein 20.6 71 0.0024 21.7 2.7 15 50-64 251-265 (369)
347 3ax6_A Phosphoribosylaminoimid 20.4 1.5E+02 0.0052 19.6 4.3 25 47-71 240-264 (380)
348 2dyu_A Formamidase; AMIF, CEK, 20.3 90 0.0031 20.8 3.1 18 47-64 114-131 (334)
349 4dah_A Sporulation kinase D; a 20.1 58 0.002 19.6 2.0 16 49-64 163-178 (217)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.2e-20 Score=124.21 Aligned_cols=67 Identities=21% Similarity=0.396 Sum_probs=57.5
Q ss_pred hhhhhhcCC-----CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCCC
Q psy13814 3 DIKNYCLDI-----KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVE 75 (75)
Q Consensus 3 ~~~~~~~~~-----k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~~ 75 (75)
.+++|.... ..+++||||||++++++++|||+.++.+ ++.|+||||||+|+|+++++||.++|||++
T Consensus 99 sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g------~~~R~tFiID~~G~Ir~~~v~~~~~grn~d 170 (216)
T 3sbc_A 99 SLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEG------VALRGLFIIDPKGVIRHITINDLPVGRNVD 170 (216)
T ss_dssp HHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTT------EECEEEEEECTTSBEEEEEEECTTBCCCHH
T ss_pred hHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCC------ceeeEEEEECCCCeEEEEEEcCCCCCCCHH
Confidence 466676532 2369999999999999999999987643 789999999999999999999999999974
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.80 E-value=6.2e-20 Score=123.03 Aligned_cols=67 Identities=27% Similarity=0.482 Sum_probs=57.3
Q ss_pred hhhhhhcCC-----CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCCC
Q psy13814 3 DIKNYCLDI-----KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVE 75 (75)
Q Consensus 3 ~~~~~~~~~-----k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~~ 75 (75)
.+++|..+. ..+++||||||++++++++|||+.++. +++.|+||||||+|+|+++++|+.++|||++
T Consensus 103 sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~------g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~ 174 (219)
T 3tue_A 103 AHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQ------GVAYRGLFIIDPHGMLRQITVNDMPVGRSVE 174 (219)
T ss_dssp HHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTCCCCHH
T ss_pred hHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCC------CeeEEEEEEECCCCeEEEEEEecCCCCCCHH
Confidence 466675521 247899999999999999999998754 3789999999999999999999999999963
No 3
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.63 E-value=3.6e-16 Score=98.87 Aligned_cols=66 Identities=21% Similarity=0.362 Sum_probs=54.7
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
.+++|.+ +++++||+|+|++++++++|||+.++.... ...+.|+|||||++|+|+++++++...+|
T Consensus 80 ~~~~~~~--~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~--~~~~~p~tflID~~G~I~~~~~~~~~~~~ 145 (164)
T 4gqc_A 80 CLKKFKD--ENRLAFNLLSDYNREVIKLYNVYHEDLKGL--KMVAKRAVFIVKPDGTVAYKWVTDNPLNE 145 (164)
T ss_dssp HHHHHHH--HTTCCSEEEECTTSHHHHHTTCEEEEETTE--EEEECCEEEEECTTSBEEEEEECSCTTCC
T ss_pred HHHHHHH--hcCcccceeecCchHHHHHcCCcccccccC--cCCeeeEEEEECCCCEEEEEEEeCCCCCC
Confidence 4566666 689999999999999999999987643211 13578999999999999999999988887
No 4
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.58 E-value=2.9e-15 Score=96.14 Aligned_cols=70 Identities=16% Similarity=0.159 Sum_probs=55.4
Q ss_pred hhhhhhcCCCCCCc--eeEEecCchHHHHHcCCccccccCC-cccCccceeEEEECCCCcEEEEEEcCCCCCCCCC
Q psy13814 3 DIKNYCLDIKGDFP--FAIIGDENRDLAVKLDLLDEENKNN-LETAITVRAVYIIGPDRKLKLSIVYPASTGRSVE 75 (75)
Q Consensus 3 ~~~~~~~~~k~~l~--fpLlsD~~~~i~~~yGv~~~~~~~~-~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~~ 75 (75)
.+++|.. +.+++ ||+|+|++++++++||+..++...+ .+...+.|+||||| +|+|+++++++.++|||++
T Consensus 92 ~~~~f~~--~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~ 164 (173)
T 3mng_A 92 VTGEWGR--AHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCS 164 (173)
T ss_dssp HHHHHHH--HTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTT
T ss_pred HHHHHHH--HhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchH
Confidence 4566766 56776 9999999999999999986532100 01125789999999 9999999999999999974
No 5
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.58 E-value=3.7e-15 Score=93.22 Aligned_cols=67 Identities=22% Similarity=0.283 Sum_probs=54.6
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
++++|.+ +++++||+|+|++++++++|||..+... ..++.++.|+|||||++|+|+++++.+...+|
T Consensus 77 ~~~~~~~--~~~~~~p~l~D~~~~v~~~ygv~~~~~~-~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~ 143 (157)
T 4g2e_A 77 SNKAFKE--HNKLNFTILSDYNREVVKKYNVAWEFPA-LPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKE 143 (157)
T ss_dssp HHHHHHH--HTTCCSEEEECTTSHHHHHTTCEEECTT-STTCEEECEEEEEECTTSBEEEEEEESSTTCC
T ss_pred HHHHHHH--HcCCcEEEEEcCCcHHHHHcCCcccccc-CCCcceeeeeEEEECCCCEEEEEEECCCCCCC
Confidence 4566666 7889999999999999999999754322 12344689999999999999999999988876
No 6
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.57 E-value=3.2e-15 Score=98.85 Aligned_cols=63 Identities=37% Similarity=0.725 Sum_probs=53.4
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++++||+++|++++++++||++.++...+.++..+.|++|||||+|+|++++.+|.++|||+
T Consensus 92 ~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~ 154 (220)
T 1xcc_A 92 LNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNA 154 (220)
T ss_dssp CSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 478999999999999999999986643222233357899999999999999999999999985
No 7
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.55 E-value=6.7e-15 Score=97.50 Aligned_cols=62 Identities=50% Similarity=0.906 Sum_probs=53.0
Q ss_pred CCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 13 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 13 ~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
++++||+++|++++++++||+..++.....++..+.|++||||++|+|++++.+|.++|||+
T Consensus 96 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~ 157 (224)
T 1prx_A 96 EKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNF 157 (224)
T ss_dssp SCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCH
T ss_pred cCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCH
Confidence 68999999999999999999987643322233467899999999999999999999999985
No 8
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.53 E-value=7.5e-15 Score=98.24 Aligned_cols=61 Identities=56% Similarity=0.995 Sum_probs=52.0
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+..++...+.++..+.|++|||||+|+|++++.+|.++|||+
T Consensus 93 ~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~ 153 (233)
T 2v2g_A 93 DMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNF 153 (233)
T ss_dssp SCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 8999999999999999999986543222233467899999999999999999999999986
No 9
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.52 E-value=1.2e-14 Score=101.04 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=49.9
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
.+++|.+ +++++||||||++++++++|||+.+ +.+.|+|||||++|+|+++|... ..+++
T Consensus 67 ~~~~f~~--~~~l~fp~l~D~~~~v~~~ygv~~~--------~~~~r~tfiId~~G~i~~~~~~v-~~~~h 126 (322)
T 4eo3_A 67 ALKRFKE--KNDLKVTLLSDPEGILHEFFNVLEN--------GKTVRSTFLIDRWGFVRKEWRRV-KVEGH 126 (322)
T ss_dssp HHHHHHH--HHTCCSEEEECTTCHHHHHTTCEET--------TEECCEEEEECTTSBEEEEEESC-CSTTH
T ss_pred HHHHHHH--hhCCceEEEEcCchHHHHhcCCCCC--------CcCccEEEEECCCCEEEEEEeCC-Ccccc
Confidence 4677777 7899999999999999999999853 25789999999999999998654 44443
No 10
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.48 E-value=1.8e-14 Score=93.12 Aligned_cols=65 Identities=17% Similarity=0.149 Sum_probs=51.5
Q ss_pred hhhhhhcCCCCCC--ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 3 DIKNYCLDIKGDF--PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 3 ~~~~~~~~~k~~l--~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
.+++|+. +.++ +||||||++++++++||++.+....+. ...+.|+||||| +|+|++++++|.+.+
T Consensus 90 ~~~~w~~--~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~-g~~~~R~tfvId-dG~V~~~~v~~~~~~ 156 (171)
T 2xhf_A 90 VMAAWGK--TVDPEHKIRMLADMHGEFTRALGTELDSSKMLG-NNRSRRYAMLID-DNKIRSVSTEPDITG 156 (171)
T ss_dssp HHHHHHH--HHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHS-SCCBCCEEEEEE-TTEEEEEEETTSCSH
T ss_pred HHHHHHH--hcCCCCCeEEEEeCCchHHHHhCCceeccccCC-CcceEEEEEEEe-CCEEEEEEEeCCCCc
Confidence 4667877 5566 899999999999999999876432111 125899999998 999999999987653
No 11
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.46 E-value=8.5e-14 Score=94.23 Aligned_cols=57 Identities=35% Similarity=0.582 Sum_probs=51.1
Q ss_pred CCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 13 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 13 ~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.+++||+++|++++++++|||..+..+ ..+.|++|||||+|+|++++.++.++|||+
T Consensus 94 ~~i~fPil~D~~~~ia~~ygv~~~~~g-----~~~~p~~fIID~dG~I~~~~~~~~~~gr~~ 150 (249)
T 3a2v_A 94 VRIPFPIIADPQGTVARRLGLLHAESA-----THTVRGVFIVDARGVIRTMLYYPMELGRLV 150 (249)
T ss_dssp CCCCSCEEECTTSHHHHHHTCCCTTCS-----SSCCEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCCceeEEECCchHHHHHhCCccccCC-----CcccceEEEECCCCeEEEEEecCCcccchh
Confidence 689999999999999999999876542 137899999999999999999999999986
No 12
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.43 E-value=1.9e-13 Score=88.78 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=51.7
Q ss_pred hhhhhhcCCCCCCc--eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 3 DIKNYCLDIKGDFP--FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 3 ~~~~~~~~~k~~l~--fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.+++|.. +.+++ ||||||++++++++||++.+....+.+ ..+.|+|||| ++|+|+++++++. .+|++
T Consensus 96 ~~~~f~~--~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g-~~s~R~tfII-~dG~I~~~~~~~~-~~~~~ 164 (176)
T 4f82_A 96 VMGAWGR--DLHTAGKVRMMADGSAAFTHALGLTQDLSARGMG-IRSLRYAMVI-DGGVVKTLAVEAP-GKFEV 164 (176)
T ss_dssp HHHHHHH--HTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCC-EEECCEEEEE-ETTEEEEEEECCT-TCCSS
T ss_pred HHHHHHH--HhCCCCCceEEEcCchHHHHHhCCCccccccCCC-cccccEEEEE-cCCEEEEEEEcCC-CCcch
Confidence 4667776 67788 999999999999999998764322211 1267999999 9999999999984 35554
No 13
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.42 E-value=2.2e-13 Score=88.49 Aligned_cols=64 Identities=16% Similarity=0.152 Sum_probs=50.4
Q ss_pred hhhhhhcCCCCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCC
Q psy13814 3 DIKNYCLDIKGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 3 ~~~~~~~~~k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
.+++|+. +.++ +||||||++++++++||++.+....+.+ ..+.|+||||| +|+|+++++++...
T Consensus 93 ~~~~~~~--~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g-~~~~R~tfvId-dG~V~~~~v~~~~~ 157 (182)
T 1xiy_A 93 VLKSWFK--SMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMG-MRPWRFVAIVE-NNILVKMFQEKDKQ 157 (182)
T ss_dssp HHHHHHH--HTTCCSSEEEECTTSHHHHHTTCEEECGGGTCC-EEECCEEEEEE-TTEEEEEEECSSCC
T ss_pred HHHHHHH--HcCCCCceEEEeCchHHHHHhCCceeccccCCC-CceEEEEEEEc-CCEEEEEEEeCCcc
Confidence 4677877 5667 6999999999999999998654321211 13789999999 99999999998654
No 14
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.35 E-value=1.1e-12 Score=88.55 Aligned_cols=55 Identities=20% Similarity=0.343 Sum_probs=49.6
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||++.+.. +.+.|++||||++|+|++++.++.+++|++
T Consensus 154 ~~~fp~l~D~~~~va~~ygv~~~~~------g~~~p~tflID~~G~I~~~~~~~~~~~~~~ 208 (254)
T 3tjj_A 154 PIRIPLLSDLTHQISKDYGVYLEDS------GHTLRGLFIIDDKGILRQITLNDLPVGRSV 208 (254)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTT------TEECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred ccccceeeCcHHHHHHHcCCccccC------CCccceEEEECCCCeEEEEEecCCCCCCCH
Confidence 7899999999999999999986643 257899999999999999999999999975
No 15
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.33 E-value=2e-12 Score=86.63 Aligned_cols=65 Identities=12% Similarity=0.119 Sum_probs=52.3
Q ss_pred hhhhhhcCCCCCC-ceeEEecC-chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 3 DIKNYCLDIKGDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 3 ~~~~~~~~~k~~l-~fpLlsD~-~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
.+++|.. ++++ +||+|||+ +++++++||++.++.. ..+++.|+|||||++|+|++.+..+...++
T Consensus 95 ~~~~f~~--~~gl~~fplLsD~~~~~vak~yGv~~~~~~---~~G~~~p~tfvID~dG~I~~~~~~~~~~~~ 161 (224)
T 3keb_A 95 SLARARH--EHGLPNIALLSTLRGRDFHKRYGVLITEYP---LSGYTSPAIILADAANVVHYSERLANTRDF 161 (224)
T ss_dssp HHHHHHH--HHCCTTCEEEESTTCTTHHHHTTCBCCSTT---STTCBCCEEEEECTTCBEEEEEECSBTTCC
T ss_pred HHHHHHH--HcCCCCceEEEcCCchHHHHHhCCcccccc---ccCCccCEEEEEcCCCEEEEEEecCCCCCC
Confidence 4566766 6788 69999999 7999999999865321 123679999999999999999999887664
No 16
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.31 E-value=2.6e-12 Score=85.72 Aligned_cols=55 Identities=20% Similarity=0.350 Sum_probs=49.3
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+..+.. +...|++||||++|+|++.+.++.+.+|++
T Consensus 140 ~~~fp~l~D~~~~v~~~ygv~~~~~------g~~~p~~flID~~G~I~~~~~~~~~~~~~~ 194 (240)
T 3qpm_A 140 PMKIPLLSDLTHQISKDYGVYLEDQ------GHTLRGLFIIDEKGVLRQITMNDLPVGRSV 194 (240)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCceeEEeCchHHHHHHhCCccccC------CCccceEEEEcCCCeEEEEEecCCCCCCCH
Confidence 7999999999999999999986543 257899999999999999999999999874
No 17
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.23 E-value=1.1e-11 Score=80.01 Aligned_cols=67 Identities=9% Similarity=0.057 Sum_probs=50.6
Q ss_pred hhhhhhcCCCCCCc--eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 3 DIKNYCLDIKGDFP--FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 3 ~~~~~~~~~k~~l~--fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
.+++|.. +++++ ||+|+|++++++++||+..+....+.+ ..+.|+||||| +|+|+++++++.+.+.+
T Consensus 105 ~~~~f~~--~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g-~~~~r~tfiId-dG~I~~~~~~~~~g~~~ 173 (184)
T 3uma_A 105 VMGAWAT--HSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLG-IRSKRYSMLVE-DGVVKALNIEESPGQAT 173 (184)
T ss_dssp HHHHHHH--HHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCE-EEECCEEEEEE-TTEEEEEEECSSTTCCS
T ss_pred HHHHHHH--HhCCCCceEEEEcCchHHHHHcCCceeccccCCc-ccceeEEEEEC-CCEEEEEEEeCCCCCCc
Confidence 3566766 67788 999999999999999997653211111 13679999996 99999999998765543
No 18
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.23 E-value=1.5e-11 Score=80.25 Aligned_cols=55 Identities=20% Similarity=0.343 Sum_probs=47.9
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+..+.. +...|++||||++|+|++.+..+.+.+|++
T Consensus 111 ~~~fp~l~D~~~~~~~~ygv~~~~~------g~~~p~~~lID~~G~I~~~~~g~~~~~~~~ 165 (211)
T 2pn8_A 111 PIRIPLLSDLTHQISKDYGVYLEDS------GHTLRGLFIIDDKGILRQITLNDLPVGRSV 165 (211)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCceEEEECCchHHHHHcCCcccCC------CcccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 6899999999999999999975542 246899999999999999999988888864
No 19
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.21 E-value=7.1e-12 Score=79.51 Aligned_cols=66 Identities=18% Similarity=0.400 Sum_probs=48.8
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
++++|.. +++++||+++|++++++++||+.......+.......|++||||++|+|++++ ++....
T Consensus 98 ~~~~~~~--~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~ 163 (179)
T 3ixr_A 98 SHDSFCA--KQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW-RQVKVP 163 (179)
T ss_dssp HHHHHHH--HHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE-CSCCST
T ss_pred HHHHHHH--HcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE-cCCCCC
Confidence 3555655 67899999999999999999998654332222223579999999999999998 444443
No 20
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.20 E-value=3.4e-11 Score=76.86 Aligned_cols=63 Identities=22% Similarity=0.428 Sum_probs=51.2
Q ss_pred hhhhhcCCCC----CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 4 IKNYCLDIKG----DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 4 ~~~~~~~~k~----~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++|.. ++ +++||+++|++++++++||+..+.. +.+.|++||||++|+|++.+..+.+.+|+.
T Consensus 78 ~~~~~~--~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~------g~~~p~~~lID~~G~i~~~~~~~~~~~~~~ 144 (186)
T 1n8j_A 78 HKAWHS--SSETIAKIKYAMIGDPTGALTRNFDNMREDE------GLADRATFVVDPQGIIQAIEVTAEGIGRDA 144 (186)
T ss_dssp HHHHHH--HCTTGGGCCSEEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred HHHHHH--HcCcccCCceeEEECCchHHHHHhCCccCCC------CceeeEEEEECCCCeEEEEEecCCCCCCCH
Confidence 455554 34 7899999999999999999975432 146899999999999999999888777763
No 21
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.18 E-value=5.3e-11 Score=74.28 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=50.0
Q ss_pred hhhhhhcCCCCCC--ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 3 DIKNYCLDIKGDF--PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 3 ~~~~~~~~~k~~l--~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
.+++|.. ++++ +||+++|++++++++||+..+....+.+ ..+.|+||||| +|+|++.+..+ +.+|.
T Consensus 84 ~~~~~~~--~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~-~~~~p~~~vid-~G~i~~~~~~~-~~~~~ 151 (162)
T 1tp9_A 84 VMKAWAK--SYPENKHVKFLADGSATYTHALGLELDLQEKGLG-TRSRRFALLVD-DLKVKAANIEG-GGEFT 151 (162)
T ss_dssp HHHHHHH--TCTTCSSEEEEECTTSHHHHHTTCEEEETTTTSE-EEECCEEEEEE-TTEEEEEEECS-SSCCS
T ss_pred HHHHHHH--hcCCCCCeEEEECCCchHHHHcCcccccccCCCC-ccceeEEEEEE-CCEEEEEEeeC-CCCCc
Confidence 3566766 5778 8999999999999999997442111100 12589999999 99999999888 76664
No 22
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.16 E-value=5.7e-11 Score=75.18 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=52.9
Q ss_pred hhhhhhcCCCCCCc--eeEEecCchHHHHHcCCccccc-cCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCCC
Q psy13814 3 DIKNYCLDIKGDFP--FAIIGDENRDLAVKLDLLDEEN-KNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSVE 75 (75)
Q Consensus 3 ~~~~~~~~~k~~l~--fpLlsD~~~~i~~~yGv~~~~~-~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~~ 75 (75)
.+++|.. +.+++ ||+|+|++++++++||+..... .. +...+.|+|||| ++|+|++.++++.+.++++.
T Consensus 80 ~~~~~~~--~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~--g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~ 150 (167)
T 2wfc_A 80 VMDAWGK--AHGADDKVQMLADPGGAFTKAVDMELDLSAVL--GNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCS 150 (167)
T ss_dssp HHHHHHH--HTTCTTTSEEEECTTSHHHHHTTCEECCHHHH--SSCEECCEEEEE-ETTEEEEEEECTTSSSSSTT
T ss_pred HHHHHHH--hcCCCcceEEEECCCCcHHHHcCCcccccccc--CcccceEEEEEE-eCCEEEEEEecCCCCcceec
Confidence 3556666 57788 9999999999999999975421 00 112467999999 99999999999999888763
No 23
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.16 E-value=5.8e-11 Score=77.61 Aligned_cols=54 Identities=19% Similarity=0.387 Sum_probs=47.6
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+..+ . +...|++||||++|+|++.+.++.+.+|++
T Consensus 115 ~~~fp~l~D~~~~~~~~ygv~~~-~------g~~~p~~~lID~~G~i~~~~~~~~~~~~~~ 168 (213)
T 2i81_A 115 NIKHTLLSDITKSISKDYNVLFD-D------SVSLRAFVLIDMNGIVQHLLVNNLAIGRSV 168 (213)
T ss_dssp SCSSEEEECTTSHHHHHTTCEET-T------TEECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred CCCceEEECCchHHHHHhCCccc-c------CCcccEEEEECCCCEEEEEEecCCCCCCCH
Confidence 78999999999999999999752 1 257899999999999999999998888874
No 24
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.15 E-value=6.8e-11 Score=74.90 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=50.9
Q ss_pred hhhhhhcCCCCC--CceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 3 DIKNYCLDIKGD--FPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 3 ~~~~~~~~~k~~--l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.+++|.. +++ ++||+|+|++++++++||+..+....+.+. ...|.||+|| +|+|++++..+.+.+|+.
T Consensus 92 ~~~~~~~--~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~-~~~~~t~~I~-~G~I~~~~~~~~~~~~~~ 161 (171)
T 2pwj_A 92 TVNAWAE--KIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGI-RSERWSAYVV-DGKVKALNVEESPSDVKV 161 (171)
T ss_dssp HHHHHHH--HTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCE-EECCEEEEEE-TTEEEEEEECSSTTCCSS
T ss_pred HHHHHHH--HhCCCCceEEEECCccHHHHHhCCccccccccCCc-ccceeEEEEE-CCEEEEEEeecCCCCCcc
Confidence 3556655 456 479999999999999999975432111110 1478899999 999999999999988764
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.14 E-value=2.2e-11 Score=75.07 Aligned_cols=66 Identities=18% Similarity=0.419 Sum_probs=49.4
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
.+++|.. +++++||+++|++++++++||+..+....+.......|++||||++|+|++.+ ++...+
T Consensus 82 ~~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~ 147 (163)
T 3gkn_A 82 SHDNFCA--KQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW-RKVKVA 147 (163)
T ss_dssp HHHHHHH--HHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE-CSCCST
T ss_pred HHHHHHH--HhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE-cCCCcc
Confidence 3555655 57899999999999999999998754433322222489999999999999998 544443
No 26
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.14 E-value=8.3e-11 Score=73.29 Aligned_cols=60 Identities=18% Similarity=0.364 Sum_probs=48.5
Q ss_pred hhhhhhcCCCCCC-ceeEEecC-chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCC
Q psy13814 3 DIKNYCLDIKGDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 3 ~~~~~~~~~k~~l-~fpLlsD~-~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
.+++|.. ++++ +||+++|+ +++++++||+..+.. +.+.|++||||++|+|++.+..+...
T Consensus 90 ~~~~~~~--~~~~~~~~~l~D~~~~~~~~~~gv~~~~~------g~~~p~~~liD~~G~i~~~~~~~~~~ 151 (166)
T 3p7x_A 90 AQKRWCA--SAGLDNVITLSDHRDLSFGENYGVVMEEL------RLLARAVFVLDADNKVVYKEIVSEGT 151 (166)
T ss_dssp HHHHHHH--HHTCSSCEEEECTTTCHHHHHHTCEETTT------TEECCEEEEECTTCBEEEEEECSBTT
T ss_pred HHHHHHH--HcCCCceEEccCCchhHHHHHhCCccccC------CceeeEEEEECCCCeEEEEEEcCCcc
Confidence 4556655 6788 89999999 999999999976542 25689999999999999998876543
No 27
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.13 E-value=7.3e-11 Score=75.80 Aligned_cols=55 Identities=25% Similarity=0.513 Sum_probs=48.3
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|.+++++++||+..+.. +...|++||||++|+|++.+.++.+.+|++
T Consensus 99 ~~~~p~l~D~~~~~~~~ygv~~~~~------g~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 153 (202)
T 1uul_A 99 QMNIPILADKTKCIMKSYGVLKEED------GVAYRGLFIIDPKQNLRQITVNDLPVGRDV 153 (202)
T ss_dssp SCSSCEEECTTCHHHHHHTCEETTT------TEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCceeEEECCchHHHHHcCCccCCC------CceeeEEEEECCCCEEEEEEeCCCCCCCCH
Confidence 7899999999999999999975542 257899999999999999999988888874
No 28
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.13 E-value=9.7e-11 Score=76.74 Aligned_cols=55 Identities=25% Similarity=0.445 Sum_probs=48.3
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|.+.+++++||+..+.. +...|++||||++|+|++.+.++.+.+|++
T Consensus 119 ~~~fp~l~D~~~~i~~~ygv~~~~~------g~~~P~~~liD~~G~I~~~~~g~~~~~~~~ 173 (220)
T 1zye_A 119 HMNIALLSDLTKQISRDYGVLLEGP------GLALRGLFIIDPNGVIKHLSVNDLPVGRSV 173 (220)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred CCceEEEECCcHHHHHHhCCeecCC------CcccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 7899999999999999999975543 257899999999999999999998888874
No 29
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.12 E-value=1e-10 Score=77.12 Aligned_cols=54 Identities=24% Similarity=0.519 Sum_probs=46.2
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+. +.. +...|++||||++|+|++.+..+.+.++++
T Consensus 119 ~~~fp~l~D~~~~~~~~ygv~-~~~------g~~~P~~~lID~~G~I~~~~~g~~~~~~~~ 172 (221)
T 2c0d_A 119 NVEFTLVSDINKDISKNYNVL-YDN------SFALRGLFIIDKNGCVRHQTVNDLPIGRNV 172 (221)
T ss_dssp SCSSEEEECTTSHHHHHTTCE-ETT------TEECEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred CCceEEEECCchHHHHHcCCc-ccC------CCccceEEEECCCCeEEEEEecCCCCCCCH
Confidence 689999999999999999997 432 146899999999999999999887766653
No 30
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.10 E-value=1.6e-10 Score=73.90 Aligned_cols=55 Identities=25% Similarity=0.423 Sum_probs=48.1
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|.+++++++||+..+.. +...|++||||++|+|++.+..+.+.+|++
T Consensus 97 ~~~~p~l~D~~~~~~~~~gv~~~~~------~~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 151 (197)
T 1qmv_A 97 PLNIPLLADVTRRLSEDYGVLKTDE------GIAYRGLFIIDGKGVLRQITVNDLPVGRSV 151 (197)
T ss_dssp SCSSCEEECTTCHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred CCceEEEECCcHHHHHHcCCccCCC------CceeeEEEEECCCCcEEEEEeCCCCCCCCH
Confidence 7899999999999999999975432 247899999999999999999988888874
No 31
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.09 E-value=2e-10 Score=75.54 Aligned_cols=66 Identities=11% Similarity=0.175 Sum_probs=51.1
Q ss_pred hhhhhhcCCCCCCc-eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 3 DIKNYCLDIKGDFP-FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 3 ~~~~~~~~~k~~l~-fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
.+++|.. +++++ ||+++|++++++++||+..+....+.+ ..+.|+|||| ++|+|++.+..+.+.||
T Consensus 82 ~~~~~~~--~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~-~~~~p~t~li-~~G~i~~~~~~~~~~~~ 148 (241)
T 1nm3_A 82 VMNAWKE--DEKSENISFIPDGNGEFTEGMGMLVGKEDLGFG-KRSWRYSMLV-KNGVVEKMFIEPNEPGD 148 (241)
T ss_dssp HHHHHHH--HTTCTTSEEEECTTSHHHHHTTCEEECTTTTCC-EEECCEEEEE-ETTEEEEEEECCSCSSC
T ss_pred HHHHHHH--hcCCCceEEEECCCcHHHHHhCceeecccccCc-ccceeEEEEE-ECCEEEEEEEeccCCCc
Confidence 3566655 57786 999999999999999997543221110 0267999999 99999999999998886
No 32
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.04 E-value=2.4e-10 Score=72.68 Aligned_cols=54 Identities=24% Similarity=0.393 Sum_probs=46.3
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|++++++++||+..+ . +...|++||||++|+|++.+..+.+.+|++
T Consensus 94 ~~~~~~l~D~~~~~~~~~gv~~~-~------g~~~P~~~liD~~G~i~~~~~g~~~~~~~~ 147 (192)
T 2h01_A 94 NIKHTLISDISKSIARSYDVLFN-E------SVALRAFVLIDKQGVVQHLLVNNLALGRSV 147 (192)
T ss_dssp SCSSEEEECTTSHHHHHTTCEET-T------TEECCEEEEECTTSBEEEEEEGGGSSGGGH
T ss_pred CCCcCeEECCcHHHHHHhCCcCc-C------CceeeEEEEEcCCCEEEEEEeCCCCCCCCH
Confidence 78999999999999999999752 1 146899999999999999999887777753
No 33
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.02 E-value=6.6e-10 Score=68.97 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=46.5
Q ss_pred hhhhhhcCCCCCC-ceeEEec-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 3 DIKNYCLDIKGDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 3 ~~~~~~~~~k~~l-~fpLlsD-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
.+++|.. ++++ +||+++| ++++++++||+..... +.+.|++||||++|+|++.+..+.
T Consensus 87 ~~~~~~~--~~~~~~~~~l~D~~~~~~~~~~gv~~~~~------g~~~p~~~liD~~G~i~~~~~g~~ 146 (163)
T 1psq_A 87 AQKRWCG--AEGLDNAIMLSDYFDHSFGRDYALLINEW------HLLARAVFVLDTDNTIRYVEYVDN 146 (163)
T ss_dssp HHHHHHH--HHTCTTSEEEECTTTCHHHHHHTCBCTTT------CSBCCEEEEECTTCBEEEEEECSB
T ss_pred HHHHHHH--hcCCCCcEEecCCchhHHHHHhCCccccC------CceEEEEEEEcCCCeEEEEEecCC
Confidence 3555655 5778 8999999 8999999999975431 145799999999999999998654
No 34
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.01 E-value=1e-09 Score=70.97 Aligned_cols=61 Identities=13% Similarity=0.176 Sum_probs=47.5
Q ss_pred hhhhhhcCCCCCC-ceeEEecC-chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 3 DIKNYCLDIKGDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 3 ~~~~~~~~~k~~l-~fpLlsD~-~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
.+++|.. ++++ +||+++|+ +++++++||+...... ..+...|++||||++|+|++.+..+.
T Consensus 123 ~~~~~~~--~~~~~~f~~l~D~~~~~~~~~ygv~~~~~~---~~g~~~p~~~lID~~G~I~~~~~~~~ 185 (200)
T 3zrd_A 123 AQSRFCG--AEGLSNVITLSTLRGADFKQAYGVAITEGP---LAGLTARAVVVLDGQDNVIYSELVNE 185 (200)
T ss_dssp HHTTCTT--TTTCTTEEEEETTSCTHHHHHTTCEECSST---TTTSBCCEEEEECTTSBEEEEEECSB
T ss_pred HHHHHHH--HcCCCCceEEecCchHHHHHHhCceeeccc---CCCccccEEEEECCCCeEEEEEecCC
Confidence 3455555 6789 99999999 9999999999754321 11246899999999999999987653
No 35
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.97 E-value=2.5e-09 Score=66.53 Aligned_cols=58 Identities=16% Similarity=0.183 Sum_probs=45.0
Q ss_pred hhhhhcCCCCCC-ceeEEecC-chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDF-PFAIIGDE-NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l-~fpLlsD~-~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++|.. ++++ +||+++|+ +++++++||+...+.. ..+...|++||||++|+|++.+..
T Consensus 89 ~~~~~~--~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~---~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 89 QARFCG--AEGIENAKTVSTFRNHALHSQLGVDIQTGP---LAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HTTCTT--TTTCTTEEEEECTTCTHHHHHTTCEECSST---TTTSBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHH--HcCCCceEEeeccccchHHHHhCceecccc---cCCccceeEEEEcCCCEEEEEEeC
Confidence 455555 6788 79999998 8999999999754211 112467999999999999999984
No 36
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.95 E-value=3.2e-09 Score=67.01 Aligned_cols=55 Identities=25% Similarity=0.557 Sum_probs=46.7
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
+++||+++|.+.+++++||+..+.. +...+++||||++|+|++.+..+.+.+|+.
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~------g~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 145 (187)
T 1we0_A 91 SIEYIMIGDPSQTISRQFDVLNEET------GLADRGTFIIDPDGVIQAIEINADGIGRDA 145 (187)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTTSCCCT
T ss_pred CCCceEEECCchHHHHHhCCCcCCC------CceeeEEEEECCCCeEEEEEecCCCCCCCH
Confidence 7899999999999999999975432 146899999999999999998887766664
No 37
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.94 E-value=1.5e-09 Score=70.98 Aligned_cols=54 Identities=22% Similarity=0.502 Sum_probs=47.0
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
+++||+++|++++++++||+..... +...+++||||++|+|++.+..+.+.+++
T Consensus 132 ~~~~~~l~D~~~~~~~~ygv~~~~~------g~~~P~~~lID~~G~I~~~~~g~~~~~~~ 185 (222)
T 3ztl_A 132 HMKIPLLADRKQEISKAYGVFDEED------GNAFRGLFIIDPNGILRQITINDKPVGRS 185 (222)
T ss_dssp SCSSCEEECSSSHHHHHTTCBCTTT------SSBCEEEEEECTTSEEEEEEEECTTBCCC
T ss_pred ccceeEEeCCchHHHHHcCCeecCC------CCccceEEEECCCCeEEEEEecCCCCCCC
Confidence 8999999999999999999975542 24679999999999999999988877765
No 38
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.88 E-value=2e-09 Score=66.58 Aligned_cols=58 Identities=12% Similarity=0.220 Sum_probs=47.0
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
.++++.. +++++||+++|.+.+++++||+.. +..+.+++||||++|+|++.+..+...
T Consensus 76 ~~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~~--------~~~~~P~~~lid~~G~i~~~~~g~~~~ 133 (161)
T 3drn_A 76 SHKRFKE--KYKLPFILVSDPDKKIRELYGAKG--------FILPARITFVIDKKGIIRHIYNSQMNP 133 (161)
T ss_dssp HHHHHHH--HTTCCSEEEECTTSHHHHHTTCCC--------SSSCCCEEEEECTTSBEEEEEECSSCT
T ss_pred HHHHHHH--HhCCCceEEECCcHHHHHHcCCCC--------cCcccceEEEECCCCEEEEEEecCCCC
Confidence 3455655 678999999999999999999962 135789999999999999998875443
No 39
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.86 E-value=4.9e-09 Score=65.31 Aligned_cols=60 Identities=27% Similarity=0.400 Sum_probs=45.9
Q ss_pred hhhhhcCCCCCC-ceeEEec-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCC
Q psy13814 4 IKNYCLDIKGDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 4 ~~~~~~~~k~~l-~fpLlsD-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
+++|.. ++++ +||+++| +++++ ++||+...... ..+...|++||||++|+|++.+..+..
T Consensus 93 ~~~~~~--~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~---~~g~~~p~~~liD~~G~i~~~~~~~~~ 154 (171)
T 2yzh_A 93 QKRFCE--SFNIQNVTVASDFRYRDM-EKYGVLIGEGA---LKGILARAVFIIDKEGKVAYVQLVPEI 154 (171)
T ss_dssp HHHHHH--HTTCCSSEEEECTTTCGG-GGGTCBBCSST---TTTSBCCEEEEECTTSBEEEEEECSBT
T ss_pred HHHHHH--HcCCCCeEEeecCccCcH-HHhCCEecccc---cCCceeeEEEEEcCCCeEEEEEeCCCc
Confidence 455655 5788 8999999 89999 99999754311 012467999999999999999986543
No 40
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.81 E-value=1.6e-08 Score=62.35 Aligned_cols=56 Identities=11% Similarity=0.255 Sum_probs=44.7
Q ss_pred hhhhhcCCCCCC-ceeEEec-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDF-PFAIIGD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l-~fpLlsD-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. ++++ +||+++| .+++++++||+..... +...+++||||++|+|++.+..+
T Consensus 90 ~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~v~~~~~------g~~~p~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 90 QARWCG--ANGIDKVETLSDHRDMSFGEAFGVYIKEL------RLLARSVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp TSCCGG--GSSCTTEEEEEGGGTCHHHHHTTCBBTTT------CSBCCEEEEECTTSCEEEEEECS
T ss_pred HHHHHH--hcCCCCceEeeCCchhHHHHHhCCccccC------CceeeEEEEEcCCCcEEEEEecC
Confidence 444544 5778 8999999 8999999999975431 24579999999999999999754
No 41
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.80 E-value=6.6e-09 Score=63.54 Aligned_cols=59 Identities=12% Similarity=0.332 Sum_probs=46.3
Q ss_pred hhhhhcCCCCCCceeEEecC--chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDE--NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~--~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
++++.. +++++||+++|. ++++++.||+..... .++.|++||||++|+|++.+..+.+.
T Consensus 84 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~v~~~~~------~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 84 HKIWAT--QSGFTFPLLSDFWPHGAVSQAYGVFNEQA------GIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp HHHHHH--HHTCCSCEEECTTTTTHHHHHTTCEETTT------TEECSEEEEECTTSBEEEEEECCTTC
T ss_pred HHHHHH--hcCCCceEEecCCcChHHHHHcCCccccC------CCeeeeEEEECCCCeEEEEEecCCCC
Confidence 444544 577899999995 999999999974431 25778999999999999998876543
No 42
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.74 E-value=3e-08 Score=62.22 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=41.4
Q ss_pred hhhhhcCCCCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++|.. +.++ +||+++|++++++++||+...... ..+...|++||||++|+|++.+..
T Consensus 89 ~~~~~~--~~~~~~~~~l~D~~~~~~~~~gv~~~~~~---~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 89 QKRFCG--AEGTENVMPASAFRDSFGEDYGVTIADGP---MAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp HTTCC--------CEEEEECTTSSHHHHTTCBBCSST---TTTSBCSEEEEECTTSBEEEEEEC
T ss_pred HHHHHH--HcCCCCceEeeCCHHHHHHHhCCcccccc---cCCcccceEEEECCCCeEEEEEEC
Confidence 344544 5677 899999999999999999754211 122567999999999999999973
No 43
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.74 E-value=1.7e-08 Score=64.26 Aligned_cols=54 Identities=26% Similarity=0.555 Sum_probs=45.2
Q ss_pred CCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 13 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 13 ~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
++++||+++|.+++++++||+..+. +...+++||||++|+|++.+..+...+++
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~~-------g~~~P~~~lid~~G~i~~~~~g~~~~~~~ 148 (198)
T 1zof_A 95 GQVSFPMVADITKSISRDYDVLFEE-------AIALRGAFLIDKNMKVRHAVINDLPLGRN 148 (198)
T ss_dssp CCCSSCEEECTTSHHHHHTTCEETT-------TEECEEEEEEETTTEEEEEEEESSSCCCH
T ss_pred cCceeEEEECCchHHHHHhCCcccC-------CcccceEEEECCCCEEEEEEecCCCCCCC
Confidence 6889999999999999999997532 14679999999999999999876655543
No 44
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.74 E-value=2.7e-08 Score=63.29 Aligned_cols=53 Identities=23% Similarity=0.577 Sum_probs=44.7
Q ss_pred CCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCCCCCC
Q psy13814 14 DFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPASTGRS 73 (75)
Q Consensus 14 ~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~~GRn 73 (75)
+++||+++|++++++++||+... . +...+++||||++|+|++.+..+.+.+++
T Consensus 105 ~~~~~~~~d~~~~~~~~~~v~~~-~------g~~~P~~~lid~~G~i~~~~~g~~~~~~~ 157 (195)
T 2bmx_A 105 TLPFPMLSDIKRELSQAAGVLNA-D------GVADRVTFIVDPNNEIQFVSATAGSVGRN 157 (195)
T ss_dssp GCCSCEEECTTSHHHHHHTCBCT-T------SSBCEEEEEECTTSBEEEEEEECTTCCCC
T ss_pred CCceeEEeCCchHHHHHhCCccc-C------CCccceEEEEcCCCeEEEEEecCCCCCCC
Confidence 78999999999999999999754 1 13679999999999999999887766554
No 45
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.73 E-value=1.4e-08 Score=62.47 Aligned_cols=55 Identities=24% Similarity=0.376 Sum_probs=43.6
Q ss_pred hhhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.+++|.. +++++||+++|++++++++||+..... ....|++||| ++|+|++.+..
T Consensus 81 ~~~~~~~--~~~~~~~~l~D~~~~~~~~~gv~~~p~------~g~~~~~~li-~~G~i~~~~~g 135 (159)
T 2a4v_A 81 SQKKFQS--KQNLPYHLLSDPKREFIGLLGAKKTPL------SGSIRSHFIF-VDGKLKFKRVK 135 (159)
T ss_dssp HHHHHHH--HHTCSSEEEECTTCHHHHHHTCBSSSS------SCBCCEEEEE-ETTEEEEEEES
T ss_pred HHHHHHH--HhCCCceEEECCccHHHHHhCCccccc------CCccceEEEE-cCCEEEEEEcc
Confidence 3555655 578899999999999999999964321 1257899999 99999999864
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.50 E-value=1.5e-07 Score=61.12 Aligned_cols=52 Identities=10% Similarity=0.181 Sum_probs=42.6
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
++++.. +++++||+++|.+.+++++||+. ..+++||||++|+|++....+..
T Consensus 114 ~~~~~~--~~~~~~~~l~D~~~~~~~~~~v~------------~~P~~~liD~~G~i~~~g~~d~~ 165 (218)
T 3u5r_E 114 VGAEVK--AYGYGFPYLKDASQSVAKAYGAA------------CTPDFFLYDRERRLVYHGQFDDA 165 (218)
T ss_dssp HHHHHH--HHTCCSCEEECTTCHHHHHHTCC------------EESEEEEECTTCBEEEEECSSSC
T ss_pred HHHHHH--HhCCCccEEECCccHHHHHcCCC------------CCCeEEEECCCCcEEEecccccc
Confidence 455544 57899999999999999999984 35899999999999988765443
No 47
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.48 E-value=2.9e-07 Score=55.76 Aligned_cols=50 Identities=10% Similarity=0.106 Sum_probs=41.2
Q ss_pred hhhhhcCCCCCCceeEEecCch-----HHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENR-----DLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~-----~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||++.|.++ ++++.||+. ..+++||||++|+|++.+...
T Consensus 83 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 137 (158)
T 3eyt_A 83 LKAFLH--EYRIKFPVGVDQPGDGAMPRTMAAYQMR------------GTPSLLLIDKAGDLRAHHFGD 137 (158)
T ss_dssp HHHHHH--HTTCCSCEEEECCCSSSSCHHHHHTTCC------------SSSEEEEECTTSEEEEEEESC
T ss_pred HHHHHH--HcCCCceEEEcCccchhhHHHHHHcCCC------------CCCEEEEECCCCCEEEEEeCC
Confidence 445545 68899999999988 799999984 357899999999999987654
No 48
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.47 E-value=3.1e-07 Score=55.62 Aligned_cols=51 Identities=12% Similarity=0.120 Sum_probs=41.6
Q ss_pred hhhhhcCCCCCCceeEEecCchH------HHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRD------LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~------i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++++.. +++++||++.|.+.. ++++||+. ..+++||||++|+|++.+....
T Consensus 85 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~~ 141 (160)
T 3lor_A 85 LKVFID--EFGIKFPVAVDMPREGQRIPSTMKKYRLE------------GTPSIILADRKGRIRQVQFGQV 141 (160)
T ss_dssp HHHHHH--HTTCCSCEEEECCCTTCSSCHHHHHTTCC------------SSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHH--HcCCCCcEEECCccccchhhhHHHhcccC------------ccceEEEECCCCcEEEEecCcC
Confidence 444544 578999999999998 99999984 4588999999999999876543
No 49
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.45 E-value=6e-07 Score=54.76 Aligned_cols=45 Identities=7% Similarity=0.204 Sum_probs=39.4
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
+.+++||+++|.++++++.||+. ..+++||||++|+|++.+.-..
T Consensus 92 ~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~G~~ 136 (158)
T 3hdc_A 92 RAPVSFNFLSDATGQVQQRYGAN------------RLPDTFIVDRKGIIRQRVTGGI 136 (158)
T ss_dssp GCCCSCEEEECTTSHHHHHTTCC------------SSSEEEEECTTSBEEEEEESCC
T ss_pred HcCCCceEEECchHHHHHHhCCC------------CcceEEEEcCCCCEEEEEeCCC
Confidence 57889999999999999999984 4578999999999999887654
No 50
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.43 E-value=8.8e-07 Score=51.45 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=37.7
Q ss_pred CCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 12 KGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 12 k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++ +||+++|.+.+++++||+. ..+++||||++|+|++.+...
T Consensus 80 ~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 124 (138)
T 4evm_A 80 GLDYKNLPVLVDPSGKLLETYGVR------------SYPTQAFIDKEGKLVKTHPGF 124 (138)
T ss_dssp TCCCTTCCEEECTTCHHHHHTTCC------------SSSEEEEECTTCCEEEEEESC
T ss_pred hcCCCCeeEEECcchHHHHHcCcc------------cCCeEEEECCCCcEEEeecCC
Confidence 5666 8999999999999999983 358999999999999887643
No 51
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.43 E-value=6e-07 Score=53.07 Aligned_cols=50 Identities=12% Similarity=0.406 Sum_probs=41.0
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||++.|.+.++++.||+. ..+++||||++|+|++.+...
T Consensus 85 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 134 (145)
T 3erw_A 85 VEDFIK--ANKLTFPIVLDSKGELMKEYHII------------TIPTSFLLNEKGEIEKTKIGP 134 (145)
T ss_dssp HHHHHH--HTTCCSCEEECSSSHHHHHTTCC------------EESEEEEECTTCCEEEEEESC
T ss_pred HHHHHH--HcCCceeEEEcCchhHHHhcCcC------------ccCeEEEEcCCCcEEEEEcCC
Confidence 344434 57889999999999999999984 468999999999999877654
No 52
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=4.8e-07 Score=54.69 Aligned_cols=48 Identities=15% Similarity=0.232 Sum_probs=39.6
Q ss_pred hhhhhcCCCCCCceeEEecC---chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 4 IKNYCLDIKGDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~---~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++++.. +++++||+++|. +.++++.||+. ..+++||||++|+|++.+.
T Consensus 84 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 84 WKDAIK--RDTLDWEQVCDFGGLNSEVAKQYSIY------------KIPANILLSSDGKILAKNL 134 (150)
T ss_dssp HHHHHH--HTTCCSEEECCSCGGGCHHHHHTTCC------------SSSEEEEECTTSBEEEESC
T ss_pred HHHHHH--HhCCCceEEEcCcccchHHHHHcCCC------------ccCeEEEECCCCEEEEccC
Confidence 344444 678999999999 77999999984 4589999999999998764
No 53
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.38 E-value=1e-06 Score=52.90 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=38.6
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
+++++||+++|.+.++++.||+. ..+++||||++|+|++.+...
T Consensus 82 ~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 125 (152)
T 3gl3_A 82 QVPAEFTVAFDPKGQTPRLYGVK------------GMPTSFLIDRNGKVLLQHVGF 125 (152)
T ss_dssp HSCCCSEEEECTTCHHHHHTTCC------------SSSEEEEECTTSBEEEEEESC
T ss_pred HcCCCCceeECCcchhHHHcCCC------------CCCeEEEECCCCCEEEEEccC
Confidence 57889999999999999999984 357899999999999988753
No 54
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.37 E-value=9.2e-07 Score=53.18 Aligned_cols=51 Identities=12% Similarity=0.244 Sum_probs=41.6
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++++.. +++++||+++|.+..+++.||+. ..+++||||++|+|++.+....
T Consensus 77 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~~ 127 (154)
T 3kcm_A 77 VEEFFR--KTGFTLPVLLDADKRVGKLYGTT------------GVPETFVIDRHGVILKKVVGAM 127 (154)
T ss_dssp HHHHHH--HHCCCCCEEECTTCHHHHHHTCC------------SBCEEEEECTTSBEEEEEESCC
T ss_pred HHHHHH--HcCCCeeEEecCchHHHHHhCCC------------CCCeEEEECCCCcEEEEEcCCC
Confidence 344444 57889999999999999999984 3578999999999999876554
No 55
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.34 E-value=8.6e-07 Score=53.39 Aligned_cols=49 Identities=16% Similarity=0.346 Sum_probs=40.1
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++++.. +++++||+++|.+.++++.||+. ..+++||||++|+|++.+.-
T Consensus 74 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~G 122 (151)
T 2f9s_A 74 VHNFMK--SYGVNFPVVLDTDRQVLDAYDVS------------PLPTTFLINPEGKVVKVVTG 122 (151)
T ss_dssp HHHHHH--HHTCCSCEEEETTSHHHHHTTCC------------SSCEEEEECTTSEEEEEEES
T ss_pred HHHHHH--HcCCCceEEECCchHHHHhcCCC------------CCCeEEEECCCCcEEEEEeC
Confidence 344444 57789999999999999999983 35789999999999987763
No 56
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.34 E-value=5.8e-07 Score=56.25 Aligned_cols=47 Identities=17% Similarity=0.281 Sum_probs=38.9
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
++++.. +++++||+++|.++++++.||+. ..+++||||++|+|++..
T Consensus 87 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~g 133 (188)
T 2cvb_A 87 MAAFAE--EHGIFFPYLLDETQEVAKAYRAL------------RTPEVFLFDERRLLRYHG 133 (188)
T ss_dssp HHHHHH--HHTCCSCEEECSSSHHHHHTTCC------------EESEEEEECTTCBEEEEE
T ss_pred HHHHHH--HhCCCceEEECCcchHHHHcCCC------------CCCeEEEECCCCcEEEEE
Confidence 344444 57789999999999999999984 357899999999999883
No 57
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.33 E-value=1.4e-06 Score=51.60 Aligned_cols=50 Identities=20% Similarity=0.179 Sum_probs=40.7
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||++.|.+.++++.||+. ..+++||||++|+|++.+.-.
T Consensus 81 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 130 (148)
T 2b5x_A 81 IKETAA--EHDITQPIFVDSDHALTDAFENE------------YVPAYYVFDKTGQLRHFQAGG 130 (148)
T ss_dssp HHHHHH--HTTCCSCEEECSSCHHHHHTCCC------------CSSEEEEECTTCBEEEEEESC
T ss_pred HHHHHH--HcCCCcceEECCchhHHHHhCCC------------CCCEEEEECCCCcEEEEecCC
Confidence 344444 57889999999999999999984 357899999999999877543
No 58
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.29 E-value=1.5e-06 Score=54.34 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=40.9
Q ss_pred hhhhhcCCCCCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 4 IKNYCLDIKGDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 4 ~~~~~~~~k~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++++.. +++++|| +++|.+.++++.||+. ..+++||||++|+|++.+....
T Consensus 102 ~~~~~~--~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~~ 153 (176)
T 3kh7_A 102 AIKWLN--ELHNPYLLSISDADGTLGLDLGVY------------GAPETYLIDKQGIIRHKIVGVV 153 (176)
T ss_dssp HHHHHH--HTTCCCSEEEEETTCHHHHHHTCC------------SSCEEEEECTTCBEEEEEESCC
T ss_pred HHHHHH--HcCCCCceEEECCcchHHHHcCCC------------CCCeEEEECCCCeEEEEEcCCC
Confidence 344444 5778888 5899999999999984 3588999999999999876543
No 59
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.26 E-value=9.7e-07 Score=53.40 Aligned_cols=42 Identities=7% Similarity=0.132 Sum_probs=36.6
Q ss_pred CCCCceeEEecC---chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~fpLlsD~---~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++||+++|+ +.++++.||+. ..+++||||++|+|++.+.
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 83 EDKSYWNQVLLQKDDVKDVLESYCIV------------GFPHIILVDPEGKIVAKEL 127 (152)
T ss_dssp HHTCCSEEEEECHHHHHHHHHHTTCC------------SSCEEEEECTTSEEEEECC
T ss_pred HhCCCCeEEecccchhHHHHHHhCCC------------cCCeEEEECCCCeEEEeeC
Confidence 467899999999 79999999984 3578999999999998864
No 60
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.26 E-value=1.1e-06 Score=55.16 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=38.0
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
+++++||+++|.+.++++.||+. ..+++||||++|+|++....+
T Consensus 107 ~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~ 150 (196)
T 2ywi_A 107 ELGYPFPYLYDETQEVAKAYDAA------------CTPDFYIFDRDLKCVYRGQLD 150 (196)
T ss_dssp HHTCCSCEEECSSCHHHHHHTCC------------EESEEEEEETTCBEEEEECSS
T ss_pred HcCCCceEEECCchHHHHHhCCC------------CCCeEEEEcCCCeEEEccccC
Confidence 56789999999999999999984 457899999999999986543
No 61
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.26 E-value=1.1e-06 Score=54.75 Aligned_cols=53 Identities=8% Similarity=0.111 Sum_probs=41.8
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||+++|+++.+++.||.+.. ...+++||||++|+|++.+...
T Consensus 114 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~v---------~~~P~~~lid~~G~i~~~~~g~ 166 (183)
T 3lwa_A 114 AQDFVT--DNGLDYPSIYDPPFMTAASLGGVPA---------SVIPTTIVLDKQHRPAAVFLRE 166 (183)
T ss_dssp HHHHHH--HTTCCSCEEECTTCGGGGGTTTCCT---------TCCSEEEEECTTSCEEEEECSC
T ss_pred HHHHHH--HcCCCccEEECCcchHHHHhccCCC---------CCCCeEEEECCCCcEEEEEcCC
Confidence 344444 5789999999999999999986432 2467899999999999887654
No 62
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.24 E-value=1.7e-06 Score=50.66 Aligned_cols=47 Identities=11% Similarity=0.145 Sum_probs=38.4
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++++.. +++++||+++|.+.++++.||+. ..+++||||++|+|+ .+.
T Consensus 70 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~i~------------~~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 70 MQSFVS--KYNLNFTNLNDADGVIWARYNVP------------WQPAFVFYRADGTST-FVN 116 (136)
T ss_dssp HHHHHH--HHTCCSEEEECTTSHHHHHTTCC------------SSSEEEEECTTSCEE-EEC
T ss_pred HHHHHH--HcCCCceEEECCchhHHHhcCCC------------CCCEEEEECCCCcEE-EEE
Confidence 344444 57889999999999999999973 358999999999998 554
No 63
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.23 E-value=2e-06 Score=56.85 Aligned_cols=60 Identities=5% Similarity=0.031 Sum_probs=45.5
Q ss_pred hhhhcC--CCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 5 KNYCLD--IKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 5 ~~~~~~--~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++|... .+....+++|+|++++++++||+...... +.....|-++||| ||+|++.++.+.
T Consensus 121 ~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~~---gg~RS~Rya~IVd-DGvV~~~~vE~~ 182 (199)
T 4h86_A 121 QAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGD---GVYWSGRWAMVVE-NGIVTYAAKETN 182 (199)
T ss_dssp HHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEET---TEEEECSEEEEEE-TTEEEEEEECSS
T ss_pred HHHHHHhcccccccccccCCcchHHHHhcCceeecCC---CcceeeEEEEEEE-CCEEEEEEEeCC
Confidence 456442 34567899999999999999998544321 1124789999999 999999999875
No 64
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.23 E-value=1.9e-06 Score=51.87 Aligned_cols=50 Identities=8% Similarity=0.151 Sum_probs=41.0
Q ss_pred hhhhhcCCCCCCceeEEec---CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGD---ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD---~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||+++| .+.++++.||+. ..+++||||++|+|+..+...
T Consensus 77 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g~ 129 (154)
T 3ia1_A 77 VLEYMK--TYPRFIPLLASDRDRPHEVAARFKVL------------GQPWTFVVDREGKVVALFAGR 129 (154)
T ss_dssp HHHHHT--TCTTEEECBCCSSCCHHHHHTTSSBC------------SSCEEEEECTTSEEEEEEESB
T ss_pred HHHHHH--HcCCCcccccccccchHHHHHHhCCC------------cccEEEEECCCCCEEEEEcCC
Confidence 445545 67889999999 899999999984 457999999999999887643
No 65
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.20 E-value=2.7e-06 Score=50.53 Aligned_cols=44 Identities=9% Similarity=0.180 Sum_probs=36.6
Q ss_pred hhhhcCCCCCCceeEEecCchHHHH--HcCCccccccCCcccCccceeEEEECCCCcEEE
Q psy13814 5 KNYCLDIKGDFPFAIIGDENRDLAV--KLDLLDEENKNNLETAITVRAVYIIGPDRKLKL 62 (75)
Q Consensus 5 ~~~~~~~k~~l~fpLlsD~~~~i~~--~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~ 62 (75)
+++.. +++++||++.|.++.++. .||+. ..+++||||++|+|++
T Consensus 79 ~~~~~--~~~~~~~~~~d~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 79 ATKAV--YMPQGWIVGWNKAGDIRTRQLYDIR------------ATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHHHT--TSCTTCEEEECTTCHHHHTTCSCCC------------SSSEEEEECTTCBEEE
T ss_pred HHHHH--HcCCCcceeeCCccchhhHHHcCCC------------CCCeEEEECCCCCEEe
Confidence 44444 678999999999999987 88874 4578999999999987
No 66
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.20 E-value=2.2e-06 Score=52.01 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=41.4
Q ss_pred hhhhhcCCCCCCceeEEe---cCchHHHHHcCCcccc-cc-CCccc-CccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIG---DENRDLAVKLDLLDEE-NK-NNLET-AITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLls---D~~~~i~~~yGv~~~~-~~-~~~~~-~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||+++ |...+++++||+.... .. ....+ ....+++||||++|+|++.+...
T Consensus 79 ~~~~~~--~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 146 (164)
T 2ggt_A 79 IANYVK--EFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN 146 (164)
T ss_dssp HHHHHH--TTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT
T ss_pred HHHHHH--HcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC
Confidence 455555 5778999994 6678899999986321 00 00000 12345899999999999987654
No 67
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.19 E-value=2.1e-06 Score=53.46 Aligned_cols=55 Identities=13% Similarity=0.245 Sum_probs=42.9
Q ss_pred hhhhhcCCCCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 4 IKNYCLDIKGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 4 ~~~~~~~~k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++++.. ++++ .||+++|+++++++.||+.... ...+++||||++|+|++.+....
T Consensus 109 ~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~--------~~~P~~~lid~~G~i~~~~~g~~ 164 (186)
T 1jfu_A 109 PKTFLK--EANLTRLGYFNDQKAKVFQDLKAIGRA--------LGMPTSVLVDPQGCEIATIAGPA 164 (186)
T ss_dssp HHHHHH--HTTCCTTCCEECTTCHHHHHHHTTTCC--------SSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHH--HcCCCCCceEECCcchHHHHhcccccc--------CCCCEEEEECCCCCEEEEEecCC
Confidence 455544 5777 5999999999999999986321 24689999999999999886543
No 68
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.19 E-value=2.7e-06 Score=52.11 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=42.2
Q ss_pred hhhhhcCCCCCCce---eEEecCchHHHHHcCCc-----cccccCCcccC-ccceeEEEECCCCcEEEEEEcCC
Q psy13814 4 IKNYCLDIKGDFPF---AIIGDENRDLAVKLDLL-----DEENKNNLETA-ITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 4 ~~~~~~~~k~~l~f---pLlsD~~~~i~~~yGv~-----~~~~~~~~~~~-~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
++++.. +++++| |+++|++.+++++|++. ..... ..+. ...+++||||++|+|++.+....
T Consensus 87 ~~~~~~--~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~lid~~G~i~~~~~g~~ 156 (174)
T 1xzo_A 87 LKKFAA--NYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPE--GEDQVIHQSSFYLVGPDGKVLKDYNGVE 156 (174)
T ss_dssp HHHHHT--TSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCS--SCCSCCSCCEEEEECTTSEEEEEEESSS
T ss_pred HHHHHH--HcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecC--CCCeeeeeeEEEEECCCCeEEEEEcCCC
Confidence 455555 677888 99999999999888751 11100 0111 34678999999999999887543
No 69
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.16 E-value=2.9e-06 Score=50.87 Aligned_cols=49 Identities=14% Similarity=0.310 Sum_probs=39.8
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++++.. +++++||++.|.+.++++.||+. ..+++||||++|+|+..+..
T Consensus 77 ~~~~~~--~~~~~~~~~~d~~~~~~~~~~i~------------~~P~~~lid~~G~i~~~~~g 125 (153)
T 2l5o_A 77 VRQYVK--DYGLPFTVMYDADKAVGQAFGTQ------------VYPTSVLIGKKGEILKTYVG 125 (153)
T ss_dssp HHHHHH--HTTCCSEEEECSSCHHHHHHTCC------------SSSEEEEECSSSCCCEEEES
T ss_pred HHHHHH--HcCCCceEEcCchHHHHHHcCCC------------ccCeEEEECCCCcEEEEEcC
Confidence 344444 57888999999999999999984 35789999999999887654
No 70
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.13 E-value=8.2e-06 Score=49.82 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=41.6
Q ss_pred hhhhhcCCCCCCceeEEecCc---hHHHHHcCCcccc-cc-CCccc-CccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDEN---RDLAVKLDLLDEE-NK-NNLET-AITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~---~~i~~~yGv~~~~-~~-~~~~~-~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++|++++|.. .+++++||+.... .. ....+ ....+++||||++|+|++.+...
T Consensus 82 ~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 149 (171)
T 2rli_A 82 MARYVQ--DFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS 149 (171)
T ss_dssp HHHHHH--TTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS
T ss_pred HHHHHH--HcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC
Confidence 445555 5778999999754 5899999986321 10 00011 12456999999999999987654
No 71
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.13 E-value=9.1e-06 Score=49.19 Aligned_cols=43 Identities=16% Similarity=0.321 Sum_probs=36.5
Q ss_pred CCCCc-eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 12 KGDFP-FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 12 k~~l~-fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+.+++ ||++.|.+.++++.||+. ..+++||||++|+|++.+.-
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g 140 (164)
T 2h30_A 97 GLNYPKLPVVTDNGGTIAQNLNIS------------VYPSWALIGKDGDVQRIVKG 140 (164)
T ss_dssp TSCCTTSCEEECTTCHHHHHTTCC------------SSSEEEEECTTSCEEEEEES
T ss_pred hCCCCcceEEEcCchHHHHHcCCC------------ccceEEEECCCCcEEEEEcC
Confidence 34677 899999999999999984 35799999999999987754
No 72
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.12 E-value=4.4e-06 Score=49.53 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=36.7
Q ss_pred CCCCceeEEecC---chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~fpLlsD~---~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++||+++|. +..++++||+. ..+++||||++|+|++.+.
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 88 KDTLSWDQVCDFTGLSSETAKQYAIL------------TLPTNILLSPTGKILARDI 132 (148)
T ss_dssp HTTCCSEEECCSCGGGCHHHHHTTCC------------SSSEEEEECTTSBEEEESC
T ss_pred HcCCCceEEEccCCcchHHHHhcCCC------------CcCEEEEECCCCeEEEecC
Confidence 578999999999 78999999984 4578999999999998764
No 73
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.10 E-value=3.2e-06 Score=51.03 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=39.2
Q ss_pred hhhhhhcCCCCCCceeEEecC---chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 3 DIKNYCLDIKGDFPFAIIGDE---NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLlsD~---~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
+++++.. +++++||++.|. ..++++.||... ...+++||||++|+|++.+...
T Consensus 70 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v----------~~~P~~~lid~~G~i~~~~~g~ 125 (151)
T 3raz_A 70 NIGNFLK--QTPVSYPIWRYTGANSRNFMKTYGNTV----------GVLPFTVVEAPKCGYRQTITGE 125 (151)
T ss_dssp HHHHHHH--HSCCSSCEEEECCSCHHHHHHTTTCCS----------CCSSEEEEEETTTTEEEECCSC
T ss_pred HHHHHHH--HcCCCCceEecCccchHHHHHHhCCcc----------CCCCEEEEECCCCcEEEEECCC
Confidence 3455555 678999999986 567888998311 2457999999999998876544
No 74
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.09 E-value=9.5e-06 Score=47.17 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=35.0
Q ss_pred CCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++++ +||+++|.+.++++.||+. ..+++||||++|+|+ .+.
T Consensus 77 ~~~~~~~~~~~d~~~~~~~~~~i~------------~~P~~~~id~~g~i~-~~~ 118 (136)
T 1zzo_A 77 KYPVKTFTQLADTDGSVWANFGVT------------QQPAYAFVDPHGNVD-VVR 118 (136)
T ss_dssp HTTCTTSEEEECTTCHHHHHTTCC------------SSSEEEEECTTCCEE-EEE
T ss_pred HcCCCceEEEEcCCcHHHHHcCCC------------CCceEEEECCCCCEE-EEe
Confidence 4677 8999999999999999983 357899999999998 544
No 75
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.09 E-value=5.9e-06 Score=50.52 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=39.1
Q ss_pred hhhhhcCCCCCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++++.. +++++|| ++.|.+.++++.||+. ..+++||||++|+|++.+.-
T Consensus 95 ~~~~~~--~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~g 144 (168)
T 2b1k_A 95 AISWLK--ELGNPYALSLFDGDGMLGLDLGVY------------GAPETFLIDGNGIIRYRHAG 144 (168)
T ss_dssp HHHHHH--HHCCCCSEEEEETTCHHHHHHTCC------------SSSEEEEECTTSBEEEEEES
T ss_pred HHHHHH--HcCCCCceeeECcchHHHHHcCcc------------ccCEEEEECCCCeEEEEEeC
Confidence 344444 5678888 6899999999999984 35789999999999987764
No 76
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.05 E-value=9.1e-06 Score=48.71 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=36.8
Q ss_pred CCCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 12 KGDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 12 k~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++++|| ++.|.+.++++.||+. ..+++||||++|+|+..+.-
T Consensus 93 ~~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~~id~~G~i~~~~~g 136 (156)
T 1kng_A 93 RYGNPFGRVGVDANGRASIEWGVY------------GVPETFVVGREGTIVYKLVG 136 (156)
T ss_dssp HHCCCCSEEEEETTSHHHHHTTCC------------SSCEEEEECTTSBEEEEEES
T ss_pred HcCCCCceeeeCchhHHHHhcCcC------------ccCeEEEEcCCCCEEEEEeC
Confidence 5678899 9999999999999984 35789999999999987654
No 77
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.04 E-value=3.8e-06 Score=49.78 Aligned_cols=42 Identities=7% Similarity=0.300 Sum_probs=35.9
Q ss_pred CCCCc-eeEEecCchH--HHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFP-FAIIGDENRD--LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~-fpLlsD~~~~--i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++ ||+++|+++. +++.||+. ..+++||||++|+|++.+.
T Consensus 85 ~~~~~~~~~~~d~~~~~~~~~~~~i~------------~~P~~~lid~~G~i~~~~~ 129 (148)
T 3hcz_A 85 SKKIGGWLNVRDSKNHTDFKITYDIY------------ATPVLYVLDKNKVIIAKRI 129 (148)
T ss_dssp HHTCTTSEEEECTTCCCCHHHHHCCC------------SSCEEEEECTTCBEEEESC
T ss_pred HcCCCCceEEeccccchhHHHhcCcC------------CCCEEEEECCCCcEEEecC
Confidence 46677 9999999988 99999984 4578999999999998754
No 78
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.03 E-value=5.2e-06 Score=49.64 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=35.0
Q ss_pred CCCCce-eEEecCc---hHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFPF-AIIGDEN---RDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~f-pLlsD~~---~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++| ++++|.+ .++++.||+. ..+++||||++|+|++...
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 131 (143)
T 4fo5_A 86 IDKLDLSTQFHEGLGKESELYKKYDLR------------KGFKNFLINDEGVIIAANV 131 (143)
T ss_dssp HHTCCGGGEEECTTGGGSHHHHHTTGG------------GCCCEEEECTTSBEEEESC
T ss_pred HhCCCCceeeecccccchHHHHHcCCC------------CCCcEEEECCCCEEEEccC
Confidence 577889 8999984 6899999984 4578999999999998754
No 79
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.02 E-value=3.7e-06 Score=51.31 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=42.5
Q ss_pred hhhhhcCCCCCCceeEEecCc---hHHHHHcCCccccccC--CcccC-ccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDFPFAIIGDEN---RDLAVKLDLLDEENKN--NLETA-ITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~---~~i~~~yGv~~~~~~~--~~~~~-~~~R~tFiId~dG~I~~~~~~ 66 (75)
++++.. +++++||+++|.+ .+++++||+....... ...+. ...+++|||| +|+|++.+..
T Consensus 90 ~~~~~~--~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g 155 (172)
T 2k6v_A 90 ADRYAK--AFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP 155 (172)
T ss_dssp HHHHHH--HHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH
T ss_pred HHHHHH--HhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC
Confidence 444544 5778999999998 7999999997543210 01111 2568999999 9999988753
No 80
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.01 E-value=8.3e-06 Score=57.26 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=41.0
Q ss_pred hhhhhcCCCCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++||++.|.+.++++.||+. ..+++||||++|+|++.+.-.
T Consensus 135 ~~~~~~--~~~l~fpv~~D~~~~l~~~ygV~------------~~Pt~~lID~~G~Iv~~~~G~ 184 (352)
T 2hyx_A 135 VAKGAA--NLGISYPIALDNNYATWTNYRNR------------YWPAEYLIDATGTVRHIKFGE 184 (352)
T ss_dssp HHHHHH--HHTCCSCEEECTTSHHHHHTTCC------------EESEEEEECTTSBEEEEEESB
T ss_pred HHHHHH--HcCCCccEEeCCcHHHHHHcCCC------------ccCEEEEEeCCCeEEEEEcCC
Confidence 344444 57889999999999999999983 458999999999999987643
No 81
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.99 E-value=5.4e-06 Score=50.53 Aligned_cols=40 Identities=13% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCceeEEecCchH---HHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAIIGDENRD---LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLlsD~~~~---i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++||+++|.++. ++++||+. ..+++||||++|+|++.+.
T Consensus 89 ~~~~~~~~d~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 131 (152)
T 2lrt_A 89 NLPWVCVRDANGAYSSYISLYNVT------------NLPSVFLVNRNNELSARGE 131 (152)
T ss_dssp TCSSEEEECSSGGGCHHHHHHTCC------------SCSEEEEEETTTEEEEETT
T ss_pred CCCceEEECCCCcchHHHHHcCcc------------cCceEEEECCCCeEEEecC
Confidence 4899999999987 99999984 3579999999999998754
No 82
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.99 E-value=6.7e-06 Score=50.15 Aligned_cols=38 Identities=11% Similarity=0.214 Sum_probs=33.6
Q ss_pred CCCC-ceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEE
Q psy13814 12 KGDF-PFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKL 62 (75)
Q Consensus 12 k~~l-~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~ 62 (75)
++++ +||++.| +.+++++||+. ..+++||||++|+|++
T Consensus 107 ~~~~~~~~~~~d-~~~~~~~~~v~------------~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 107 NYGDPSWIMVMD-DGSLVEKFNVR------------SIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHSCTTSEEEEC-CSHHHHHTTCC------------SSSEEEEEETTCCEEE
T ss_pred HcCCCCeeEEeC-hHHHHHHhCCC------------CceEEEEEcCCCcEEE
Confidence 4677 9999999 99999999984 3579999999999998
No 83
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=1.3e-06 Score=53.12 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=36.6
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++||+++|+++++++.||+.. ...+++||||++|+|++.+.
T Consensus 89 ~~~~~~~~~~d~~~~~~~~~~~~~----------~~~P~~~lid~~G~i~~~~~ 132 (159)
T 2ls5_A 89 STGVTYPLGLDPGADIFAKYALRD----------AGITRNVLIDREGKIVKLTR 132 (159)
Confidence 578899999999999999999731 12467999999999988764
No 84
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.90 E-value=1.6e-05 Score=48.05 Aligned_cols=49 Identities=10% Similarity=0.165 Sum_probs=37.9
Q ss_pred CCCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 12 KGDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 12 k~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
+++++||++.|.+ ++++.|+.+..... ...+++||||++|+|+..+...
T Consensus 88 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i------~~~P~~~lid~~G~i~~~~~g~ 136 (165)
T 3or5_A 88 TQGIIYPVMMATP-ELIRAFNGYIDGGI------TGIPTSFVIDASGNVSGVIVGP 136 (165)
T ss_dssp HHTCCSCEEECCH-HHHHHHHTTSTTCS------CSSSEEEEECTTSBEEEEECSC
T ss_pred HcCCCCceEecCH-HHHHHHhhhhccCC------CCCCeEEEECCCCcEEEEEcCC
Confidence 5788999999976 99999976543211 3568999999999999876543
No 85
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.83 E-value=3.2e-05 Score=46.09 Aligned_cols=42 Identities=12% Similarity=0.064 Sum_probs=34.9
Q ss_pred CCCCceeEEecCchH--HHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 12 KGDFPFAIIGDENRD--LAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 12 k~~l~fpLlsD~~~~--i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+++++||.+.|.++. +++.||+. ..+++||||++|+|++...
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~ 131 (142)
T 3eur_A 88 DFAKEWTNGYDKELVIKNKNLYDLR------------AIPTLYLLDKNKTVLLKDA 131 (142)
T ss_dssp GSCTTSEEEECTTCHHHHTTCSCCT------------TCSEEEEECTTCBEEEEEE
T ss_pred hcccccccccCccchhhhhhhcCCC------------cCCeEEEECCCCcEEecCC
Confidence 467889999998876 78888873 4689999999999998765
No 86
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.79 E-value=4.4e-06 Score=51.65 Aligned_cols=55 Identities=9% Similarity=0.034 Sum_probs=30.6
Q ss_pred CCCCceeEEecCc--hH-HHHHcCCccccccCCcccC--ccceeEEEECCCCcEEEEEEc
Q psy13814 12 KGDFPFAIIGDEN--RD-LAVKLDLLDEENKNNLETA--ITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 12 k~~l~fpLlsD~~--~~-i~~~yGv~~~~~~~~~~~~--~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++++||+++|.+ +. +++.|+++......-.+.+ -..|++||||++|+|++.+.-
T Consensus 93 ~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g 152 (171)
T 3cmi_A 93 NYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSS 152 (171)
T ss_dssp --CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECT
T ss_pred ccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCC
Confidence 5788999999754 33 3344443321110000000 113599999999999998753
No 87
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.71 E-value=5.8e-05 Score=48.07 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=38.4
Q ss_pred hhhhhcCCCCCCceeEEec---CchHHHHHcCCccccc---cCCcccC-ccceeEEEECCCCcEEEEEEcC
Q psy13814 4 IKNYCLDIKGDFPFAIIGD---ENRDLAVKLDLLDEEN---KNNLETA-ITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLlsD---~~~~i~~~yGv~~~~~---~~~~~~~-~~~R~tFiId~dG~I~~~~~~~ 67 (75)
++++.. +++++|+++++ ...+++++||+..... ..+..+. ...+++||||++|+|++.+..+
T Consensus 96 ~~~~~~--~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~ 164 (200)
T 2b7k_A 96 LKEYLS--DFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRN 164 (200)
T ss_dssp HHHHHT--TSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTT
T ss_pred HHHHHH--HcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCC
Confidence 444544 56778988874 4678999999962110 0011111 2457999999999999987543
No 88
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.65 E-value=1.9e-05 Score=49.51 Aligned_cols=61 Identities=15% Similarity=0.071 Sum_probs=36.1
Q ss_pred hhhhhcCCCCCCceeEEe--cCchHHHH-HcCCcccccc-CC-ccc-CccceeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYCLDIKGDFPFAIIG--DENRDLAV-KLDLLDEENK-NN-LET-AITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~~~~k~~l~fpLls--D~~~~i~~-~yGv~~~~~~-~~-~~~-~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++++.. +++++||+++ |.+++.+. .|+.+..... .+ .+. .-..+++||||++|+|++.+..
T Consensus 104 ~~~~~~--~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g 170 (185)
T 2gs3_A 104 IKEFAA--GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP 170 (185)
T ss_dssp HHHHHH--HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT
T ss_pred HHHHHH--HcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC
Confidence 455544 6788999997 56665543 4543322110 00 000 0124699999999999998754
No 89
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.64 E-value=4.5e-05 Score=47.55 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=37.5
Q ss_pred hhhhhhcCCCCCCceeEEe--cCchHHHH-HcCCcccccc--CCccc-CccceeEEEECCCCcEEEEEEc
Q psy13814 3 DIKNYCLDIKGDFPFAIIG--DENRDLAV-KLDLLDEENK--NNLET-AITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 3 ~~~~~~~~~k~~l~fpLls--D~~~~i~~-~yGv~~~~~~--~~~~~-~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++++.. +++++||+++ |.++..+. .|+.+..... ...+. .-..+++||||++|+|++.+..
T Consensus 101 ~~~~~~~--~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g 168 (183)
T 2obi_A 101 EIKEFAA--GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP 168 (183)
T ss_dssp HHHHHHH--TTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT
T ss_pred HHHHHHH--HcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC
Confidence 3555555 6789999998 77776553 4533322110 00000 0124799999999999998754
No 90
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.61 E-value=7.6e-05 Score=46.41 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=28.7
Q ss_pred CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 23 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 23 ~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
...+++++||+....... + ....+++|||||+|+|+..+.-
T Consensus 105 ~~~~~~~~~g~~~~~~~~--~-~~~~~~~~lID~~G~i~~~~~g 145 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAGN--D-FIHPNVVVVLSPELQIKDYIYG 145 (170)
T ss_dssp HHHHHHHHTTCCCEEETT--E-EECCCEEEEECTTSBEEEEEES
T ss_pred HHHHHHHHCCeEEecCCC--c-cccCceEEEECCCCeEEEEEeC
Confidence 567899999975332110 1 1356789999999999988744
No 91
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.50 E-value=0.00013 Score=43.51 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=32.6
Q ss_pred CCCc-eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 13 GDFP-FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 13 ~~l~-fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
.+++ +++++|.+.++++.||+. ..+++||||++|+|++..
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~ 125 (152)
T 2lja_A 85 DQLKGIQLHMGTDRTFMDAYLIN------------GIPRFILLDRDGKIISAN 125 (152)
T ss_dssp HTCCSEEEECSSCTHHHHHTTCC------------SSCCEEEECTTSCEEESS
T ss_pred cCCCCceeecCcchhHHHHcCcC------------CCCEEEEECCCCeEEEcc
Confidence 4454 588899999999999984 346899999999998864
No 92
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.47 E-value=7.1e-05 Score=45.37 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=32.5
Q ss_pred CCCCceeEEe--cCchHHHH-HcCCccccccCCccc-CccceeEEEECCCCcEEEEEEc
Q psy13814 12 KGDFPFAIIG--DENRDLAV-KLDLLDEENKNNLET-AITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 12 k~~l~fpLls--D~~~~i~~-~yGv~~~~~~~~~~~-~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+++++||+++ |.++.++. .|+.+........+. ....+++||||++|+|++.+..
T Consensus 93 ~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 151 (169)
T 2v1m_A 93 KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP 151 (169)
T ss_dssp HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT
T ss_pred hcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC
Confidence 4788899997 77776553 342221110000000 0124689999999999998754
No 93
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.51 E-value=2.4e-05 Score=46.19 Aligned_cols=41 Identities=12% Similarity=0.071 Sum_probs=31.8
Q ss_pred eeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcCCC
Q psy13814 17 FAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 17 fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
+|+..|.+.+++++||+. ..+++||||++|+|++.......
T Consensus 90 ~~~~~~~~~~~~~~~~v~------------~~P~~~lid~~G~i~~~~~~~~~ 130 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGIT------------GIPALVIVKKDGTLISMNGRGEV 130 (143)
Confidence 456677788999999973 45789999999999987644443
No 94
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.38 E-value=7.9e-05 Score=48.37 Aligned_cols=19 Identities=16% Similarity=0.210 Sum_probs=16.5
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.++|||||++|+|++.+..
T Consensus 159 ~~ttflID~~G~i~~~~~g 177 (207)
T 2r37_A 159 NFEKFLVGPDGIPIMRWHH 177 (207)
T ss_dssp TTCEEEECTTSCEEEEECT
T ss_pred cceEEEECCCCcEEEEECC
Confidence 3799999999999998764
No 95
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.34 E-value=9.3e-05 Score=48.46 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=16.4
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.+++||||++|+|+..+..
T Consensus 177 npttfLID~~G~vv~~~~g 195 (215)
T 2i3y_A 177 NFEKFLVGPDGIPVMRWSH 195 (215)
T ss_dssp TTCEEEECTTSCEEEEECT
T ss_pred CceEEEECCCCeEEEEeCC
Confidence 3799999999999998753
No 96
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.34 E-value=7.4e-05 Score=46.99 Aligned_cols=59 Identities=15% Similarity=0.162 Sum_probs=33.0
Q ss_pred hhhhh-cCCCCCCceeEEe--cCchHHHH-HcCCccccccCCcccCcc-c---eeEEEECCCCcEEEEEEc
Q psy13814 4 IKNYC-LDIKGDFPFAIIG--DENRDLAV-KLDLLDEENKNNLETAIT-V---RAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 4 ~~~~~-~~~k~~l~fpLls--D~~~~i~~-~yGv~~~~~~~~~~~~~~-~---R~tFiId~dG~I~~~~~~ 66 (75)
++++. . +++++||+++ |.++.+++ .|+.+..... + -...+ . .++||||++|+|++.+..
T Consensus 103 ~~~~~~~--~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~-~-v~~~P~i~~~~~~~lid~~G~i~~~~~g 169 (190)
T 2vup_A 103 IKEFVCT--KFKAEFPIMAKINVNGENAHPLYEYMKKTKP-G-ILKTKAIKWNFTSFLIDRDGVPVERFSP 169 (190)
T ss_dssp HHHHHHH--HHCCCSCBBCCCBSSSTTBCHHHHHHHHHSC-C-GGGCCSCCSTTCEEEECTTSCEEEEECT
T ss_pred HHHHHHH--hcCCCeEEEeecccCcccccHHHHHHHhhcC-C-cCCCccccccceEEEECCCCcEEEEECC
Confidence 44444 4 4678899997 66666443 2322211100 0 00011 1 289999999999988653
No 97
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.23 E-value=0.00022 Score=44.75 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=30.0
Q ss_pred CCCceeEEe--cCchHHHH-HcCCccccccCCcccCc-cce---eEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFAIIG--DENRDLAV-KLDLLDEENKNNLETAI-TVR---AVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fpLls--D~~~~i~~-~yGv~~~~~~~~~~~~~-~~R---~tFiId~dG~I~~~~~~ 66 (75)
++++||+++ |.++..+. .|+.+...... .+++ ..+ ++||||++|+|++.+..
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~--~~~~~~iP~~~~~~liD~~G~i~~~~~g 167 (187)
T 3dwv_A 109 FKAEFPIMAKINVNGENAHPLYEYMKKTKPG--ILATKAIKWNFTSFLIDRDGVPVERFSP 167 (187)
T ss_dssp CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCC--SBSSSSCCSTTCEEEECTTSCEEEEECT
T ss_pred cCCCCceeeccccCCcchhHHHHHHHhhcCC--ccCCCccccceeEEEECCCCCEEEEECC
Confidence 488999997 66655442 23111110000 0011 345 89999999999998753
No 98
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=96.98 E-value=0.00011 Score=45.79 Aligned_cols=17 Identities=24% Similarity=0.245 Sum_probs=15.0
Q ss_pred eEEEECCCCcEEEEEEc
Q psy13814 50 AVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~ 66 (75)
++||||++|+|++.+..
T Consensus 149 ~~~lid~~G~i~~~~~g 165 (181)
T 2p31_A 149 WKYLVAPDGKVVGAWDP 165 (181)
T ss_dssp CEEEECTTSCEEEEECT
T ss_pred eEEEEcCCCCEEEEeCC
Confidence 89999999999998653
No 99
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=96.91 E-value=0.00046 Score=40.92 Aligned_cols=37 Identities=5% Similarity=0.054 Sum_probs=29.2
Q ss_pred ceeEEe-cCchHHHHHcCCccccccCCcccCccceeEEEEC-CCCcEEEEE
Q psy13814 16 PFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLSI 64 (75)
Q Consensus 16 ~fpLls-D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId-~dG~I~~~~ 64 (75)
.||++. |.+.+++++||+. ..+++|||| ++|+|++..
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~------------~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 88 ALPFEDRKGMEFLTTGFDVK------------SIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp ECCTTCHHHHHHHHHHTTCC------------SSSEEEEEETTTCCEEESC
T ss_pred ccccCchHHHHHHHHHcCCC------------CCCEEEEEECCCCcEEecc
Confidence 466555 6678999999973 357999999 999998764
No 100
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.90 E-value=0.00046 Score=41.70 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=29.5
Q ss_pred CCCceeEE--ecCchHHHH-HcCCccccccCCcccCccce---eEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFAII--GDENRDLAV-KLDLLDEENKNNLETAITVR---AVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fpLl--sD~~~~i~~-~yGv~~~~~~~~~~~~~~~R---~tFiId~dG~I~~~~~~ 66 (75)
++++||++ .|.++.++. .|+.+..... + -+....+ ++||||++|+|++.+..
T Consensus 95 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~-~-~~~~~~p~~~~~~lid~~G~i~~~~~g 152 (170)
T 2p5q_A 95 FKSEFPIFDKIDVNGENASPLYRFLKLGKW-G-IFGDDIQWNFAKFLVNKDGQVVDRYYP 152 (170)
T ss_dssp TCCCSCBBCCCBSSSTTBCHHHHHHHTHHH-H-TTCSCCCSTTCEEEECTTSCEEEEECT
T ss_pred cCCCceeEeeeccCCCchHHHHHHHHhcCC-C-ccCCcccccccEEEECCCCCEEEeeCC
Confidence 57788888 577665542 2321110000 0 0001234 89999999999998754
No 101
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=96.80 E-value=0.0031 Score=40.54 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=16.6
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.++|||||++|+|++.+.-
T Consensus 173 ~p~tflID~~G~i~~~~~g 191 (208)
T 2f8a_A 173 NFEKFLVGPDGVPLRRYSR 191 (208)
T ss_dssp TTCEEEECTTSCEEEEECT
T ss_pred CceEEEEcCCCcEEEEeCC
Confidence 4789999999999998754
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=96.78 E-value=0.00057 Score=40.65 Aligned_cols=37 Identities=3% Similarity=0.100 Sum_probs=29.2
Q ss_pred ceeEEe-cCchHHHHHcCCccccccCCcccCccceeEEEEC-CCCcEEEEE
Q psy13814 16 PFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLSI 64 (75)
Q Consensus 16 ~fpLls-D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId-~dG~I~~~~ 64 (75)
.||++. |.+.+++++||+. ..+++|||| ++|+|++..
T Consensus 88 ~~~~~~~d~~~~~~~~~~v~------------~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 88 AVPFAQSEAVQKLSKHFNVE------------SIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp ECCGGGHHHHHHHHHHTTCC------------SSSEEEEEETTTCCEEESC
T ss_pred eeccchhhHHHHHHHHhCCC------------CCCEEEEEECCCCeEEEec
Confidence 456555 6678999999973 357999999 999998764
No 103
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=96.61 E-value=0.00026 Score=43.99 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=15.4
Q ss_pred eEEEECCCCcEEEEEEcC
Q psy13814 50 AVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~ 67 (75)
++||||++|+|+..+...
T Consensus 138 ~~~lid~~G~i~~~~~g~ 155 (180)
T 3kij_A 138 WKYLVNPEGQVVKFWRPE 155 (180)
T ss_dssp CEEEECTTSCEEEEECTT
T ss_pred eEEEECCCCCEEEEECCC
Confidence 499999999999987644
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=96.46 E-value=0.0012 Score=38.85 Aligned_cols=37 Identities=5% Similarity=0.061 Sum_probs=28.3
Q ss_pred ceeEEe-cCchHHHHHcCCccccccCCcccCccceeEEEEC-CCCcEEEEE
Q psy13814 16 PFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIG-PDRKLKLSI 64 (75)
Q Consensus 16 ~fpLls-D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId-~dG~I~~~~ 64 (75)
.||++. |.+.++++.||+. ..+++|||| ++|+|++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~------------~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 88 ALPFDQRSTVSELGKTFGVE------------SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp ECCTTCHHHHHHHHHHHTCC------------SSSEEEEEETTTCCEEESC
T ss_pred EeeccchhHHHHHHHHcCCC------------CCCEEEEEECCCCeEEecc
Confidence 455544 5678899999973 457999999 899998754
No 105
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.40 E-value=0.023 Score=35.07 Aligned_cols=19 Identities=16% Similarity=0.230 Sum_probs=16.2
Q ss_pred cceeEEEECCCCcEEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~ 65 (75)
..+++|||||+|+|+..+.
T Consensus 133 H~~~~~liD~~G~i~~~~~ 151 (170)
T 4hde_A 133 HGTSFYLIDQNGKVMKKYS 151 (170)
T ss_dssp CCCEEEEECTTSCEEEEEE
T ss_pred eeeEEEEEcCCCeEEEEEC
Confidence 3578999999999998875
No 106
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=96.29 E-value=0.0018 Score=39.82 Aligned_cols=37 Identities=8% Similarity=0.085 Sum_probs=27.0
Q ss_pred ceeEEecCc-hHHHHHcCCccccccCCcccCccceeEEEECCC-CcEEEEE
Q psy13814 16 PFAIIGDEN-RDLAVKLDLLDEENKNNLETAITVRAVYIIGPD-RKLKLSI 64 (75)
Q Consensus 16 ~fpLlsD~~-~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~d-G~I~~~~ 64 (75)
.||+..+.. .+++++||+. ..+++||||++ |+|+...
T Consensus 108 ~~~~~~~~~~~~l~~~~~v~------------~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 108 SIPFANRNIVEALTKKYSVE------------SIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp ECCTTCHHHHHHHHHHTTCC------------SSSEEEEEETTTCCEEESC
T ss_pred ccccCchhHHHHHHHHcCCC------------CCCEEEEEeCCCCEEEecc
Confidence 344444333 7899999973 45899999998 9998754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.23 E-value=0.071 Score=30.57 Aligned_cols=42 Identities=21% Similarity=0.175 Sum_probs=32.1
Q ss_pred CCCceeEE---ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFAII---GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fpLl---sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|-.+ .|.+.+++++||+. ..++++++|++|++...+.-
T Consensus 57 ~~v~~~~v~~~~d~~~~~~~~~~v~------------~~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 57 GKFNIYYARLEEEKNIDLAYKYDAN------------IVPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp SSCEEEEEETTSSHHHHHHHHTTCC------------SSSEEEEECTTCCEEEEEES
T ss_pred CCeEEEEEeCCCCchHHHHHHcCCc------------ceeEEEEECCCCCEEEEecC
Confidence 45666555 47788999999984 45799999999999876543
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.35 E-value=0.039 Score=33.31 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=25.6
Q ss_pred cCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 22 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 22 D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
|.+.++++.||+. ..++++|+|++|++....
T Consensus 103 ~~~~~l~~~~~v~------------~~Pt~~~~d~~G~~~~~~ 133 (154)
T 2ju5_A 103 QKNQELKAQYKVT------------GFPELVFIDAEGKQLARM 133 (154)
T ss_dssp HHHHHHHHHTTCC------------SSSEEEEECTTCCEEEEE
T ss_pred hhHHHHHHHcCCC------------CCCEEEEEcCCCCEEEEe
Confidence 4567999999984 357999999999998876
No 109
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=94.28 E-value=0.11 Score=29.82 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=26.0
Q ss_pred CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 23 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 23 ~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.+..++++||+. ..++++++|++|++...+.-
T Consensus 74 ~~~~~~~~~~v~------------~~Pt~~~~d~~G~~~~~~~G 105 (130)
T 2kuc_A 74 EGVELRKKYGVH------------AYPTLLFINSSGEVVYRLVG 105 (130)
T ss_dssp THHHHHHHTTCC------------SSCEEEEECTTSCEEEEEES
T ss_pred chHHHHHHcCCC------------CCCEEEEECCCCcEEEEecC
Confidence 577999999984 35789999999999876553
No 110
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=93.34 E-value=0.13 Score=29.73 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=28.4
Q ss_pred cCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 22 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 22 D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
|.+.++++.||+... ...++++++|++|++.+...-
T Consensus 75 ~~~~~l~~~~~v~~~---------~~~Pt~~~~d~~G~~~~~~~g 110 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQ---------DGIPAVVVVNSDGKVRYTTKG 110 (133)
T ss_dssp TSSHHHHHHTTCGGG---------GCSSEEEEECTTSCEEEECCS
T ss_pred cchHHHHHHhCCccC---------CccceEEEECCCCCEEEEecC
Confidence 788999999998321 246899999999999877543
No 111
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=90.43 E-value=0.13 Score=30.06 Aligned_cols=28 Identities=11% Similarity=0.219 Sum_probs=23.3
Q ss_pred cCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 22 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 22 D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
|.+.++++.||+. ..++++++|++|++.
T Consensus 78 ~~~~~l~~~~~v~------------~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 78 AQDVALLKHLNVL------------GLPTILFFDGQGQEH 105 (134)
T ss_dssp HHHHHHHHHTTCC------------SSSEEEEECTTSCBC
T ss_pred chHHHHHHHcCCC------------CCCEEEEECCCCCEe
Confidence 5578899999984 457999999999985
No 112
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=88.93 E-value=0.91 Score=26.26 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=28.0
Q ss_pred CCCceeE-EecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 13 GDFPFAI-IGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 13 ~~l~fpL-lsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
.++.|-. =.|.+.++++.||+. ..++++++|++|++.
T Consensus 69 ~~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 69 GQIVIYKVDTEKEQELAGAFGIR------------SIPSILFIPMEGKPE 106 (136)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSCEEEEECSSSCCE
T ss_pred CCEEEEEEeCCCCHHHHHHcCCC------------CCCEEEEECCCCcEE
Confidence 3455533 357788999999984 457899999999986
No 113
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=88.36 E-value=1.9 Score=23.23 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=28.5
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 48 ~~v~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 88 (105)
T 1nsw_A 48 DKVTVAKLNVDENPETTSQFGIM------------SIPTLILF-KGGRPVKQLI 88 (105)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CCcEEEEEECcCCHHHHHHcCCc------------cccEEEEE-eCCeEEEEEe
Confidence 34555433 47788999999984 34678888 8999877654
No 114
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=87.42 E-value=2.3 Score=23.15 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=28.9
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 56 ~~v~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 96 (115)
T 1thx_A 56 DRLKVVKLEIDPNPTTVKKYKVE------------GVPALRLV-KGEQILDSTE 96 (115)
T ss_dssp TTCEEEEEESTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CcEEEEEEEcCCCHHHHHHcCCC------------ceeEEEEE-cCCEEEEEec
Confidence 34665444 47788999999984 34678888 8999887654
No 115
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=86.95 E-value=1.2 Score=25.66 Aligned_cols=37 Identities=11% Similarity=0.280 Sum_probs=28.7
Q ss_pred CCCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 13 GDFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 13 ~~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
.++.| .+-.|.+.++++.||+. ..++++++|++|++.
T Consensus 82 ~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~~~~g~~~ 119 (141)
T 3hxs_A 82 GKIYIYKVNVDKEPELARDFGIQ------------SIPTIWFVPMKGEPQ 119 (141)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSSEEEEECSSSCCE
T ss_pred CceEEEEEECCCCHHHHHHcCCC------------CcCEEEEEeCCCCEE
Confidence 34554 45567889999999984 457899999999976
No 116
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=86.30 E-value=1.1 Score=24.93 Aligned_cols=40 Identities=20% Similarity=0.304 Sum_probs=29.2
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|--+ .|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 49 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 89 (112)
T 2voc_A 49 KLKIVKIDVDENQETAGKYGVM------------SIPTLLVL-KDGEVVETSVG 89 (112)
T ss_dssp TCEEEEEETTTCCSHHHHTTCC------------SBSEEEEE-ETTEEEEEEES
T ss_pred CcEEEEEECCCCHHHHHHcCCC------------cccEEEEE-eCCEEEEEEeC
Confidence 4555433 47788999999984 35788888 89998876653
No 117
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=85.38 E-value=2.6 Score=22.74 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=27.6
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 91 (108)
T 2trx_A 52 KLTVAKLNIDQNPGTAPKYGIR------------GIPTLLLF-KNGEVAATKV 91 (108)
T ss_dssp TEEEEEEETTTCTTHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CcEEEEEECCCCHHHHHHcCCc------------ccCEEEEE-eCCEEEEEEe
Confidence 4555443 46788999999984 34677777 8999877654
No 118
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=85.15 E-value=1.4 Score=28.03 Aligned_cols=40 Identities=5% Similarity=0.090 Sum_probs=33.2
Q ss_pred CCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 13 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 13 ~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
..+.++.+.|.+.++++.||+- ..++.++++++|++....
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~------------~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVT------------DFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCC------------CSSEEEEEETTSCEEECC
T ss_pred CceEEEEEeCchHHHHHHcCCC------------CCCeEEEEeCCCCeEeec
Confidence 5577899999999999999984 347889999999987654
No 119
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=85.05 E-value=2.6 Score=22.56 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=27.8
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 91 (107)
T 2i4a_A 52 KVTVAKVNIDDNPETPNAYQVR------------SIPTLMLV-RDGKVIDKKV 91 (107)
T ss_dssp SEEEEEEETTTCCHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred cEEEEEEECCCCHHHHHhcCCC------------ccCEEEEE-eCCEEEEEec
Confidence 4555433 46788999999984 34677788 8999887654
No 120
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=85.02 E-value=3 Score=22.26 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=28.9
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|--+ .|.+.++++.||+. ..++++++ ++|++...+..
T Consensus 49 ~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~g~~~~~~~g 90 (109)
T 2yzu_A 49 GKLLVAKLDVDENPKTAMRYRVM------------SIPTVILF-KDGQPVEVLVG 90 (109)
T ss_dssp TTBEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred CceEEEEEECCCCHhHHHhCCCC------------cCCEEEEE-eCCcEeeeEeC
Confidence 34665444 47788999999984 34677777 89998776543
No 121
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=84.92 E-value=1.9 Score=27.10 Aligned_cols=39 Identities=15% Similarity=0.077 Sum_probs=27.8
Q ss_pred eEEecCchHHHHHc--------CCccccccCCcccCccceeEEEECCCCcEEEEEEcCC
Q psy13814 18 AIIGDENRDLAVKL--------DLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 18 pLlsD~~~~i~~~y--------Gv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~~ 68 (75)
.+=.|....+++.| |+. ..+.+++++|+|++.+...|-+
T Consensus 79 kVD~de~~~l~~~y~~~~q~~~gv~------------g~Pt~v~l~~dG~~v~~~ty~p 125 (173)
T 3ira_A 79 KVDREERPDIDNIYMTVCQIILGRG------------GWPLNIIMTPGKKPFFAGTYIP 125 (173)
T ss_dssp EEETTTCHHHHHHHHHHHHHHHSCC------------CSSEEEEECTTSCEEEEESSCC
T ss_pred eeCCcccCcHHHHHHHHHHHHcCCC------------CCcceeeECCCCCceeeeeeCC
Confidence 34345567888887 542 4688999999999998765443
No 122
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=82.65 E-value=2 Score=23.55 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=25.9
Q ss_pred CceeEE-ec-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPFAII-GD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~fpLl-sD-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.|--+ .| .+.+++++||+.. +| ||+++++|++...+.
T Consensus 56 v~~~~vd~~~~~~~~~~~~~v~~----------~P---t~~~~~~G~~~~~~~ 95 (111)
T 2pu9_C 56 VIFLKLDCNQENKTLAKELGIRV----------VP---TFKILKENSVVGEVT 95 (111)
T ss_dssp SEEEEEECSSTTHHHHHHHCCSB----------SS---EEEEESSSSEEEEEE
T ss_pred eEEEEEecCcchHHHHHHcCCCe----------ee---EEEEEeCCcEEEEEc
Confidence 444333 33 6789999999841 23 488889999877654
No 123
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=80.81 E-value=0.66 Score=27.86 Aligned_cols=26 Identities=12% Similarity=-0.050 Sum_probs=20.1
Q ss_pred HHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 28 AVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 28 ~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.||+. ..+++++||++|++.....
T Consensus 123 ~~~~~v~------------~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 123 RVKFGAN------------AQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp HHHHSCC------------CSSEEEEECTTSCBSSCCB
T ss_pred HHHcCCC------------CcceEEEECCCCCEEeecc
Confidence 5788873 4689999999999876543
No 124
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=79.34 E-value=4.1 Score=21.77 Aligned_cols=41 Identities=29% Similarity=0.367 Sum_probs=29.4
Q ss_pred CCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|- +=.|.+.++++.||+. ..++++++ ++|++...+.-
T Consensus 52 ~~~~~~~v~~~~~~~~~~~~~i~------------~~Pt~~~~-~~g~~~~~~~g 93 (109)
T 3tco_A 52 GKAVFGRLNVDENQKIADKYSVL------------NIPTTLIF-VNGQLVDSLVG 93 (109)
T ss_dssp TTSEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred CCceEEEEccccCHHHHHhcCcc------------cCCEEEEE-cCCcEEEeeec
Confidence 346553 4467888999999984 34677788 89998876543
No 125
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=78.26 E-value=6 Score=21.16 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=26.3
Q ss_pred CCceeE-EecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFAI-IGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fpL-lsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|-- =.|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 51 ~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 91 (107)
T 1dby_A 51 KLKCVKLNTDESPNVASEYGIR------------SIPTIMVF-KGGKKCETIIG 91 (107)
T ss_dssp TCEEEEEETTTCHHHHHHHTCC------------SSCEEEEE-SSSSEEEEEES
T ss_pred ceEEEEEECCCCHHHHHHCCCC------------cCCEEEEE-eCCEEEEEEeC
Confidence 455433 347788999999984 22444444 89998776543
No 126
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=78.06 E-value=4.4 Score=22.59 Aligned_cols=40 Identities=23% Similarity=0.356 Sum_probs=27.7
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 62 ~~v~~~~vd~d~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 102 (119)
T 1w4v_A 62 GKVVMAKVDIDDHTDLAIEYEVS------------AVPTVLAM-KNGDVVDKFV 102 (119)
T ss_dssp TSSEEEEEETTTTHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CCeEEEEEeCCCCHHHHHHcCCC------------cccEEEEE-eCCcEEEEEc
Confidence 34555433 56788999999984 23566777 8999877654
No 127
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=77.50 E-value=6 Score=20.74 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=27.4
Q ss_pred CceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 15 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 15 l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
+.|-.+ .|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 48 ~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~g~~~~~~~g 87 (104)
T 2e0q_A 48 VGFGKLNSDENPDIAARYGVM------------SLPTVIFF-KDGEPVDEIIG 87 (104)
T ss_dssp SEEEEEETTTCHHHHHHTTCC------------SSCEEEEE-ETTEEEEEEES
T ss_pred ceEEEEECCCCHHHHHhCCcc------------ccCEEEEE-ECCeEhhhccC
Confidence 555433 47788999999984 24567777 89998776543
No 128
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=76.69 E-value=3.2 Score=23.60 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=18.5
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
.+..|+.||+|.+.....+|...|
T Consensus 133 g~~~~~~DPdG~~iel~~~~~~~g 156 (156)
T 3kol_A 133 GRGVYFYDPDGFMIEIRCDPEAEG 156 (156)
T ss_dssp CEEEEEECTTSCEEEEEECCC---
T ss_pred ccEEEEECCCCCEEEEEecCCCCC
Confidence 468999999999999988886543
No 129
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=75.97 E-value=2.8 Score=24.07 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=26.7
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 72 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 111 (128)
T 2o8v_B 72 KLTVAKLNIDQNPGTAPKYGIR------------GIPTLLLF-KNGEVAATKV 111 (128)
T ss_dssp TEEEEEEETTTCCTTSGGGTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHHcCCC------------ccCEEEEE-eCCEEEEEEc
Confidence 4554333 46677888888873 34678888 8999877654
No 130
>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}
Probab=74.80 E-value=3.7 Score=23.21 Aligned_cols=27 Identities=15% Similarity=0.110 Sum_probs=17.3
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.|..++.||+|............+|++
T Consensus 109 ~~~~~~~DPdG~~iel~~~~~~~~~~~ 135 (141)
T 2qnt_A 109 QRVFRFYDPDGHAIEVGESLSQSGENL 135 (141)
T ss_dssp CEEEEEECTTCCEEEEEECC-------
T ss_pred CEEEEEECCCCCEEEEEecchHHHHHH
Confidence 488999999999888877766555543
No 131
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=74.76 E-value=8 Score=20.86 Aligned_cols=40 Identities=20% Similarity=0.227 Sum_probs=26.3
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.+++++||+.. + + ||++.++|++...+.
T Consensus 54 ~~~~~~~v~~~~~~~~~~~~~v~~----------~--P-t~~~~~~G~~~~~~~ 94 (112)
T 1t00_A 54 DKIEIVKLNIDENPGTAAKYGVMS----------I--P-TLNVYQGGEVAKTIV 94 (112)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCCS----------S--S-EEEEEETTEEEEEEE
T ss_pred CCeEEEEEEcCCCHHHHHhCCCCc----------c--c-EEEEEeCCEEEEEEe
Confidence 34555333 477889999999841 2 3 455558999877654
No 132
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=73.92 E-value=4.1 Score=22.06 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=26.2
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.||+.. +| ||++.++|++...+.
T Consensus 56 ~~~~~~vd~~~~~~~~~~~~v~~----------~P---t~~~~~~G~~~~~~~ 95 (112)
T 1ep7_A 56 KVIFLKVDVDAVAAVAEAAGITA----------MP---TFHVYKDGVKADDLV 95 (112)
T ss_dssp TSEEEEEETTTTHHHHHHHTCCB----------SS---EEEEEETTEEEEEEE
T ss_pred CeEEEEEECCchHHHHHHcCCCc----------cc---EEEEEECCeEEEEEc
Confidence 4555333 467889999999841 23 466668999877654
No 133
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=73.85 E-value=3.3 Score=23.59 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=27.2
Q ss_pred CCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.| .+=.|.+.+++++||+. ..++++++ ++|++.....-
T Consensus 67 ~~~~~~vd~d~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 107 (123)
T 1oaz_A 67 KLTVAKLNIDQNPGTAPKYGIR------------GIPTLLLF-KNGEVAATKVG 107 (123)
T ss_dssp -CEEEEEETTSCTTTGGGGTCC------------BSSEEEEE-ESSSEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHcCCC------------ccCEEEEE-ECCEEEEEEeC
Confidence 3444 33357788899999974 34678888 89998766543
No 134
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=73.57 E-value=8.2 Score=20.42 Aligned_cols=41 Identities=20% Similarity=0.266 Sum_probs=27.4
Q ss_pred CCCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.| .+=.|.+.+++++||+. ..++++++ ++|++.....-
T Consensus 50 ~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~g 91 (106)
T 3die_A 50 GKADILKLDVDENPSTAAKYEVM------------SIPTLIVF-KDGQPVDKVVG 91 (106)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SBSEEEEE-ETTEEEEEEES
T ss_pred CCcEEEEEECCcCHHHHHhCCCc------------ccCEEEEE-eCCeEEEEEeC
Confidence 34655 34457889999999984 23566666 48988776543
No 135
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=73.43 E-value=6.6 Score=21.55 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=27.8
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|--+ .|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 50 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~v~~~~G 90 (110)
T 2l6c_A 50 QVAISSVDSEARPELMKELGFE------------RVPTLVFI-RDGKVAKVFSG 90 (110)
T ss_dssp TSCEEEEEGGGCHHHHHHTTCC------------SSCEEEEE-ESSSEEEEEES
T ss_pred CcEEEEEcCcCCHHHHHHcCCc------------ccCEEEEE-ECCEEEEEEcC
Confidence 3554333 46788999999984 34678888 89998776543
No 136
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=73.33 E-value=5.1 Score=22.77 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|- +=.|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 77 ~v~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 116 (139)
T 3d22_A 77 SLMFLVIDVDELSDFSASWEIK------------ATPTFFFL-RDGQQVDKLV 116 (139)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC------------EESEEEEE-ETTEEEEEEE
T ss_pred CCEEEEEeCcccHHHHHHcCCC------------cccEEEEE-cCCeEEEEEe
Confidence 35543 3357788999999984 23444445 8999887654
No 137
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=73.30 E-value=4.2 Score=29.59 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=32.9
Q ss_pred CCCceeEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 13 GDFPFAIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 13 ~~l~fpLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
.++.++.+.|.+..+++.||+- ..++.++++++|++...-
T Consensus 183 ~~v~v~~v~~~~~~l~~kfgV~------------~~Pslvl~~~nGk~~~~~ 222 (519)
T 3t58_A 183 HAVAVRRVLNTESDLVNKFGVT------------DFPSCYLLLRNGSVSRVP 222 (519)
T ss_dssp TTEEEEEEETTCHHHHHHHTCC------------CSSEEEEEETTSCEEECC
T ss_pred CCeeEEEecCchHHHHHHcCCC------------CCCeEEEEeCCCceeecc
Confidence 4577899999999999999984 236889999999886653
No 138
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=72.85 E-value=2.7 Score=24.26 Aligned_cols=33 Identities=9% Similarity=-0.019 Sum_probs=23.7
Q ss_pred cCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 22 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 22 D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
|.+.+++++||+. ..+ ||++..+|++...+.-.
T Consensus 79 d~~~~l~~~~~v~------------~~P-t~~~~~~G~~v~~~~G~ 111 (135)
T 3emx_A 79 SAARLEMNKAGVE------------GTP-TLVFYKEGRIVDKLVGA 111 (135)
T ss_dssp HHHHHHHHHHTCC------------SSS-EEEEEETTEEEEEEESC
T ss_pred hhhHHHHHHcCCc------------eeC-eEEEEcCCEEEEEEeCC
Confidence 6788999999984 233 56665699988766543
No 139
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=72.79 E-value=2.2 Score=25.53 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=22.5
Q ss_pred EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 19 IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 19 LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+=.|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 75 Vd~d~~~~la~~~~V~------------~iPT~~~f-k~G~~v~~~~ 108 (142)
T 2es7_A 75 ADLEQSEAIGDRFNVR------------RFPATLVF-TDGKLRGALS 108 (142)
T ss_dssp ECHHHHHHHHHTTTCC------------SSSEEEEE-SCC----CEE
T ss_pred EECCCCHHHHHhcCCC------------cCCeEEEE-eCCEEEEEEe
Confidence 3356778899999984 45788888 8998876544
No 140
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=72.35 E-value=5.5 Score=23.38 Aligned_cols=39 Identities=8% Similarity=0.168 Sum_probs=27.9
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.||+. ..+++++++ +|++...+.
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~-~G~~~~~~~ 102 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEIS------------SVPTFLFFK-NSQKIDRLD 102 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC------------SSSEEEEEE-TTEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHHcCCC------------CCCEEEEEE-CCEEEEEEe
Confidence 4554333 56788999999984 357888898 898876543
No 141
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=71.48 E-value=5.3 Score=22.07 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=25.4
Q ss_pred CceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.|--+ .|.+.+++++||+.. +| ||++.++|++...+.
T Consensus 66 ~~~~~vd~~~~~~~~~~~~v~~----------~P---t~~~~~~G~~~~~~~ 104 (122)
T 2vlu_A 66 AVFLKVDVDELKPIAEQFSVEA----------MP---TFLFMKEGDVKDRVV 104 (122)
T ss_dssp SEEEEEETTTCHHHHHHTTCCS----------SS---EEEEEETTEEEEEEE
T ss_pred cEEEEEECCCCHHHHHHcCCCc----------cc---EEEEEeCCEEEEEEe
Confidence 554333 477889999999841 23 466668999876554
No 142
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=70.68 E-value=5.7 Score=22.41 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=27.2
Q ss_pred CCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.| .+=.|.+.+++++||+. ..++++++ ++|++.....
T Consensus 74 ~v~~~~vd~d~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 113 (128)
T 3ul3_B 74 RIYLLKVDLDKNESLARKFSVK------------SLPTIILL-KNKTMLARKD 113 (128)
T ss_dssp GEEEEEEEGGGCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEES
T ss_pred CeEEEEEECCCCHHHHHHcCCC------------CcCEEEEE-ECCEEEEEec
Confidence 3443 34457788999999984 35778888 6898776543
No 143
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=70.63 E-value=5.4 Score=22.32 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=24.3
Q ss_pred EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 19 IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 19 LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+=.|.+.+++++||+.. +| ||++-++|++...+.
T Consensus 57 vd~d~~~~l~~~~~V~~----------~P---T~~~~~~G~~v~~~~ 90 (105)
T 3zzx_A 57 VDVDECEDIAQDNQIAC----------MP---TFLFMKNGQKLDSLS 90 (105)
T ss_dssp EETTTCHHHHHHTTCCB----------SS---EEEEEETTEEEEEEE
T ss_pred EecccCHHHHHHcCCCe----------ec---EEEEEECCEEEEEEe
Confidence 33578899999999841 23 566668999876654
No 144
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=70.38 E-value=4.9 Score=22.35 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=25.5
Q ss_pred CceeEE-ec-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPFAII-GD-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~fpLl-sD-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.|--+ .| .+.+++++||+.. +| ||++.++|++...+.
T Consensus 69 ~~~~~vd~~~~~~~~~~~~~v~~----------~P---t~~~~~~G~~~~~~~ 108 (124)
T 1faa_A 69 VIFLKLDCNQENKTLAKELGIRV----------VP---TFKILKENSVVGEVT 108 (124)
T ss_dssp SEEEEEECSSTTHHHHHHHCCSS----------SS---EEEEEETTEEEEEEE
T ss_pred CEEEEEecCcchHHHHHHcCCCe----------ee---EEEEEeCCcEEEEEc
Confidence 444333 23 5789999999841 23 477779999877654
No 145
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=70.14 E-value=9.6 Score=20.81 Aligned_cols=38 Identities=21% Similarity=0.224 Sum_probs=26.8
Q ss_pred Cce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.| .+=.|.+.+++++||+. ..+++++++ +|++.....
T Consensus 56 ~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~-~G~~~~~~~ 94 (109)
T 3f3q_A 56 ADFYKLDVDELGDVAQKNEVS------------AMPTLLLFK-NGKEVAKVV 94 (109)
T ss_dssp SEEEEEETTTCHHHHHHTTCC------------SSSEEEEEE-TTEEEEEEE
T ss_pred CEEEEEECCCCHHHHHHcCCC------------ccCEEEEEE-CCEEEEEEe
Confidence 444 34467889999999984 235677776 898877654
No 146
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=69.66 E-value=10 Score=21.03 Aligned_cols=38 Identities=11% Similarity=0.118 Sum_probs=25.8
Q ss_pred Cce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.| .+=.|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 63 v~~~~vd~d~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 101 (116)
T 3qfa_C 63 VIFLEVDVDDCQDVASECEVK------------SMPTFQFF-KKGQKVGEFS 101 (116)
T ss_dssp SEEEEEETTTTHHHHHHTTCC------------SSSEEEEE-SSSSEEEEEE
T ss_pred CEEEEEECCCCHHHHHHcCCc------------cccEEEEE-eCCeEEEEEc
Confidence 544 34457889999999984 23455555 7898876654
No 147
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=69.66 E-value=6.5 Score=21.61 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=17.7
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..++.||+|.......++.
T Consensus 112 ~~~~~~~DPdG~~iel~~~~~ 132 (133)
T 3ey7_A 112 ITSFYFRDPDGNLIEVSTYSN 132 (133)
T ss_dssp EEEEEEECTTCCEEEEEESCC
T ss_pred eEEEEEECCCCCEEEEEecCC
Confidence 489999999999988877664
No 148
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=69.50 E-value=7.3 Score=22.01 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=25.5
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|- +=.|.+.+++++||+.. + + ||++.++|++...+.
T Consensus 69 ~v~~~~vd~d~~~~l~~~~~v~~----------~--P-t~~~~~~G~~~~~~~ 108 (124)
T 1xfl_A 69 NVLFLKVDTDELKSVASDWAIQA----------M--P-TFMFLKEGKILDKVV 108 (124)
T ss_dssp SEEEEEEETTTSHHHHHHTTCCS----------S--S-EEEEEETTEEEEEEE
T ss_pred CcEEEEEECccCHHHHHHcCCCc----------c--C-EEEEEECCEEEEEEe
Confidence 34443 33467889999999841 2 3 455558999887654
No 149
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=69.28 E-value=6 Score=22.72 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=22.6
Q ss_pred ecCchHHHHHcCCccccccCCcccCccceeEEEE-CCCCc--EEEEEE
Q psy13814 21 GDENRDLAVKLDLLDEENKNNLETAITVRAVYII-GPDRK--LKLSIV 65 (75)
Q Consensus 21 sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiI-d~dG~--I~~~~~ 65 (75)
.|.+.+++++||+. ..++++++ +++|+ +...+.
T Consensus 78 ~~~~~~l~~~~~v~------------~~Pt~~~~~~~~g~g~~~~~~~ 113 (133)
T 3cxg_A 78 VDIHPKLNDQHNIK------------ALPTFEFYFNLNNEWVLVHTVE 113 (133)
T ss_dssp TTTCHHHHHHTTCC------------SSSEEEEEEEETTEEEEEEEEE
T ss_pred ccchHHHHHhcCCC------------CCCEEEEEEecCCCeEEEEEEc
Confidence 46788999999984 34677777 55665 665543
No 150
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=69.02 E-value=6.5 Score=21.91 Aligned_cols=25 Identities=20% Similarity=0.146 Sum_probs=17.8
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
.|..++.||+|............|+
T Consensus 101 ~~~~~~~DPdG~~iel~~~~~~~~~ 125 (126)
T 1ecs_A 101 GTMAALVDPDGTLLRLIQNELLAGI 125 (126)
T ss_dssp SEEEEEECTTSCEEEEEECCC----
T ss_pred cEEEEEECCCCCEEEEecchhhccc
Confidence 4889999999999888776665553
No 151
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=68.64 E-value=11 Score=20.09 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=27.5
Q ss_pred CCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|- +=.|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 53 ~~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~g~~~~~~~g 94 (111)
T 3gnj_A 53 ESFGFYYVDVEEEKTLFQRFSLK------------GVPQILYF-KDGEYKGKMAG 94 (111)
T ss_dssp TTSEEEEEETTTCHHHHHHTTCC------------SSCEEEEE-ETTEEEEEEES
T ss_pred CceEEEEEECCcChhHHHhcCCC------------cCCEEEEE-ECCEEEEEEec
Confidence 345553 3357788999999984 34567777 68887665543
No 152
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=68.21 E-value=6.9 Score=22.49 Aligned_cols=21 Identities=10% Similarity=-0.053 Sum_probs=15.8
Q ss_pred ceeEEEECCCCcEEEEE-EcCC
Q psy13814 48 VRAVYIIGPDRKLKLSI-VYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~-~~~~ 68 (75)
.|+.|+-||||.+..+. ..|.
T Consensus 115 ~~~~~f~DPDGn~iEi~~~~p~ 136 (149)
T 4gym_A 115 MYGRSFHDLDGHLWEVMWMSAE 136 (149)
T ss_dssp EEEEEEECTTCCEEEEEEECTT
T ss_pred EEEEEEEcCCCCEEEEEEEChh
Confidence 58999999999976554 4443
No 153
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=67.96 E-value=7.3 Score=20.63 Aligned_cols=39 Identities=10% Similarity=0.166 Sum_probs=25.4
Q ss_pred CCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.| .+=.|.+.++++.||+.. + + ||++.++|++...+.
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~~----------~--P-t~~~~~~G~~~~~~~ 91 (106)
T 1xwb_A 52 NVVVLKVDVDECEDIAMEYNISS----------M--P-TFVFLKNGVKVEEFA 91 (106)
T ss_dssp TEEEEEEETTTCHHHHHHTTCCS----------S--S-EEEEEETTEEEEEEE
T ss_pred CeEEEEEeccchHHHHHHcCCCc----------c--c-EEEEEcCCcEEEEEc
Confidence 4444 333567889999999841 2 3 456668898876554
No 154
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=66.74 E-value=12 Score=19.66 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=26.4
Q ss_pred CCCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.| .+-.|.+.++++.||+. ..++ +++.++|++.....-
T Consensus 49 ~~~~~~~v~~~~~~~~~~~~~v~------------~~Pt-~~~~~~g~~~~~~~G 90 (105)
T 1fb6_A 49 GKIAVYKLNTDEAPGIATQYNIR------------SIPT-VLFFKNGERKESIIG 90 (105)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSSE-EEEEETTEEEEEEEE
T ss_pred CceEEEEEcCcchHHHHHhCCCC------------cccE-EEEEeCCeEEEEEec
Confidence 34554 34457788999999984 1234 455579998776543
No 155
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=66.58 E-value=15 Score=21.08 Aligned_cols=40 Identities=10% Similarity=0.289 Sum_probs=27.0
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.++++.||+. ..++++++ .+|++...+.
T Consensus 86 ~~~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 126 (148)
T 3p2a_A 86 GKVRFVKVNTEAEPALSTRFRIR------------SIPTIMLY-RNGKMIDMLN 126 (148)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEES
T ss_pred CceEEEEEECcCCHHHHHHCCCC------------ccCEEEEE-ECCeEEEEEe
Confidence 45665433 57888999999984 23455566 6898877543
No 156
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.60 E-value=5.2 Score=22.37 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=25.6
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL 60 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I 60 (75)
.+.|- +=.|.+.++++.||+. ..+++++++++|.+
T Consensus 67 ~~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~~~~~~ 102 (130)
T 2dml_A 67 VVKVGAVNADKHQSLGGQYGVQ------------GFPTIKIFGANKNK 102 (130)
T ss_dssp TSEEEEEETTTCHHHHHHHTCC------------SSSEEEEESSCTTS
T ss_pred ceEEEEEeCCCCHHHHHHcCCC------------ccCEEEEEeCCCCe
Confidence 35553 3356788999999984 45789999998873
No 157
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=65.34 E-value=18 Score=21.19 Aligned_cols=36 Identities=6% Similarity=-0.097 Sum_probs=24.7
Q ss_pred Ccee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEE
Q psy13814 15 FPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 15 l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~ 63 (75)
+.|- +=.|.+.++++.|++. ..++++ ++++|++...
T Consensus 56 ~~~~~vd~d~~~~l~~~~~v~------------~~Pt~~-~~~~G~~v~~ 92 (149)
T 3gix_A 56 AAIYLVDVDQTAVYTQYFDIS------------YIPSTV-FFFNGQHMKV 92 (149)
T ss_dssp EEEEEEETTTCCHHHHHTTCC------------SSSEEE-EEETTEEEEE
T ss_pred eEEEEEECCcCHHHHHHcCCC------------ccCeEE-EEECCeEEEe
Confidence 4443 3348899999999984 345555 7788988744
No 158
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=63.83 E-value=18 Score=20.51 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=27.0
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|- +=.|.+.++++.||+. ..++++++ ++|++...+.-
T Consensus 82 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 122 (140)
T 1v98_A 82 RLKVVKVNVDEHPGLAARYGVR------------SVPTLVLF-RRGAPVATWVG 122 (140)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred ceEEEEEECCCCHHHHHHCCCC------------ccCEEEEE-eCCcEEEEEeC
Confidence 45553 3346788999999984 23466666 79998776543
No 159
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=63.78 E-value=12 Score=20.76 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=24.8
Q ss_pred CceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.|--+ .|.+.+++++||+. ..++ |++.++|++...+.
T Consensus 62 v~~~~vd~~~~~~l~~~~~v~------------~~Pt-~~~~~~G~~~~~~~ 100 (114)
T 2oe3_A 62 VRFVKCDVDESPDIAKECEVT------------AMPT-FVLGKDGQLIGKII 100 (114)
T ss_dssp SEEEEEETTTCHHHHHHTTCC------------SBSE-EEEEETTEEEEEEE
T ss_pred CEEEEEECCCCHHHHHHCCCC------------cccE-EEEEeCCeEEEEEe
Confidence 554333 46788999999974 2233 45558999876554
No 160
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=63.67 E-value=18 Score=20.61 Aligned_cols=41 Identities=15% Similarity=-0.062 Sum_probs=26.9
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|-.+ .|.+.++++.||+. ..++.+++ ++|++...+.-
T Consensus 55 ~~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 96 (140)
T 3hz4_A 55 SSAVFGRINIATNPWTAEKYGVQ------------GTPTFKFF-CHGRPVWEQVG 96 (140)
T ss_dssp TTSEEEEEETTTCHHHHHHHTCC------------EESEEEEE-ETTEEEEEEES
T ss_pred CceEEEEEECCcCHhHHHHCCCC------------cCCEEEEE-eCCcEEEEEcC
Confidence 34665443 47888999999984 23444444 88988766543
No 161
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=63.55 E-value=13 Score=21.91 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=27.7
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|--+ .|.+.+++++||+. ..++++++ ++|++...+.-
T Consensus 96 ~v~~~~vd~~~~~~l~~~~~i~------------~~Pt~~~~-~~G~~~~~~~G 136 (155)
T 2ppt_A 96 QVRLAKIDTQAHPAVAGRHRIQ------------GIPAFILF-HKGRELARAAG 136 (155)
T ss_dssp TCEEEEEETTTSTHHHHHTTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred CEEEEEEeCCccHHHHHHcCCC------------cCCEEEEE-eCCeEEEEecC
Confidence 4655433 57788999999984 34567777 78998776543
No 162
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=63.29 E-value=16 Score=19.82 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=26.1
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
.++.|-.+ .|.+.+++++||+. ..++++++ ++|++.....
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~i~------------~~Pt~~~~-~~g~~~~~~~ 101 (121)
T 2i1u_A 61 TDLTVAKLDVDTNPETARNFQVV------------SIPTLILF-KDGQPVKRIV 101 (121)
T ss_dssp TTCEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHhcCCC------------cCCEEEEE-ECCEEEEEec
Confidence 35665433 57788999999984 23445555 6898876554
No 163
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=62.70 E-value=11 Score=20.31 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=18.5
Q ss_pred CCce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.| .+=.|.+.+++++||+. ..++++++ .+|++.....-
T Consensus 49 ~~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~g 89 (105)
T 4euy_A 49 YVEKIEILLQDMQEIAGRYAVF------------TGPTVLLF-YNGKEILRESR 89 (105)
T ss_dssp TEEEEEEEECCC---------C------------CCCEEEEE-ETTEEEEEEES
T ss_pred CceEEEEECCCCHHHHHhcCCC------------CCCEEEEE-eCCeEEEEEeC
Confidence 3443 34467888999999984 34567777 58988765543
No 164
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=62.45 E-value=10 Score=20.61 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=25.2
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.+++++||+.. +| ||++.++|++...+.
T Consensus 57 ~v~~~~vd~~~~~~~~~~~~v~~----------~P---t~~~~~~G~~~~~~~ 96 (112)
T 1syr_A 57 KMVFIKVDVDEVSEVTEKENITS----------MP---TFKVYKNGSSVDTLL 96 (112)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCS----------SS---EEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCHHHHHHcCCCc----------cc---EEEEEECCcEEEEEe
Confidence 3554333 466788999999841 23 466667998876544
No 165
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=62.06 E-value=13 Score=19.86 Aligned_cols=39 Identities=5% Similarity=-0.036 Sum_probs=25.0
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.||+. ..++++++ ++|++...+.
T Consensus 52 ~~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 91 (107)
T 1gh2_A 52 QAVFLEVDVHQCQGTAATNNIS------------ATPTFQFF-RNKVRIDQYQ 91 (107)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred CcEEEEEECccCHHHHHhcCCC------------cccEEEEE-ECCeEEEEEe
Confidence 3444333 56788999999984 23455555 7898776543
No 166
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.92 E-value=10 Score=21.05 Aligned_cols=38 Identities=13% Similarity=0.166 Sum_probs=25.7
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
++.|-.+ .|.+.++++.||+. ..++++++++ |++...+
T Consensus 61 ~~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~~-g~~~~~~ 99 (133)
T 1x5d_A 61 KVKLAAVDATVNQVLASRYGIR------------GFPTIKIFQK-GESPVDY 99 (133)
T ss_dssp SEEEEEEETTTCCHHHHHHTCC------------SSSEEEEEET-TEEEEEE
T ss_pred cEEEEEEECCCCHHHHHhCCCC------------eeCeEEEEeC-CCceEEe
Confidence 4544333 46778999999984 3578888887 7755443
No 167
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=61.85 E-value=14 Score=19.42 Aligned_cols=38 Identities=11% Similarity=0.113 Sum_probs=26.0
Q ss_pred Cce-eEEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPF-AIIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~f-pLlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.| .+=.|.+.++++.||+. ..++++++ ++|++...+.
T Consensus 52 ~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~g~~~~~~~ 90 (105)
T 3m9j_A 52 VIFLEVDVDDCQDVASESEVK------------SMPTFQFF-KKGQKVGEFS 90 (105)
T ss_dssp SEEEEEETTTCHHHHHHTTCC------------BSSEEEEE-ETTEEEEEEE
T ss_pred eEEEEEEhhhhHHHHHHcCCC------------cCcEEEEE-ECCeEEEEEe
Confidence 443 33357788999999984 34667777 6788766554
No 168
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=61.76 E-value=9.5 Score=21.24 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=17.6
Q ss_pred cceeEEEECCCCcEEEEEEcCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~ 68 (75)
..|+.|+-||+|.......+..
T Consensus 109 ~~~~~~~~DPdGn~iel~~~~~ 130 (135)
T 3rri_A 109 EHETFFLIDPSNNLLEFKYYFD 130 (135)
T ss_dssp CEEEEEEECTTCCEEEEEEESS
T ss_pred ceEEEEEECCCCCEEEEEEECC
Confidence 3578999999999888776653
No 169
>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0
Probab=61.53 E-value=14 Score=20.73 Aligned_cols=23 Identities=17% Similarity=-0.032 Sum_probs=18.0
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|..++.||||.+......+..
T Consensus 105 g~~~~~~~DPdG~~iel~~~~~~ 127 (134)
T 3fcd_A 105 GQREFQVRMPDGDWLNFTAPLAE 127 (134)
T ss_dssp SEEEEEEECTTSCEEEEEEECCT
T ss_pred CcEEEEEECCCCCEEEEEEcccc
Confidence 34889999999998877766544
No 170
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=61.41 E-value=14 Score=19.89 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=24.9
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|- +=.|.+.++++.||+. ..++ |++-++|++.....
T Consensus 59 ~~~~~~v~~~~~~~~~~~~~v~------------~~Pt-~~~~~~g~~~~~~~ 98 (118)
T 2vm1_A 59 GAIFLKVDVDELKDVAEAYNVE------------AMPT-FLFIKDGEKVDSVV 98 (118)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC------------SBSE-EEEEETTEEEEEEE
T ss_pred CcEEEEEEcccCHHHHHHcCCC------------cCcE-EEEEeCCeEEEEec
Confidence 45543 3357788999999984 1234 44448899876554
No 171
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=61.37 E-value=13 Score=20.23 Aligned_cols=39 Identities=18% Similarity=0.127 Sum_probs=25.1
Q ss_pred CCceeE-EecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAI-IGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpL-lsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-- =.|.+.+++++||+. ..+ ||++.++|++...+.
T Consensus 63 ~~~~~~vd~~~~~~~~~~~~v~------------~~P-t~~~~~~G~~~~~~~ 102 (117)
T 2xc2_A 63 DAIFVKVDVDKLEETARKYNIS------------AMP-TFIAIKNGEKVGDVV 102 (117)
T ss_dssp SSEEEEEETTTSHHHHHHTTCC------------SSS-EEEEEETTEEEEEEE
T ss_pred CcEEEEEECCccHHHHHHcCCC------------ccc-eEEEEeCCcEEEEEe
Confidence 454433 346778999999984 123 355558999876554
No 172
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=60.02 E-value=12 Score=20.31 Aligned_cols=20 Identities=15% Similarity=0.282 Sum_probs=16.3
Q ss_pred ccceeEEEECCCCcEEEEEE
Q psy13814 46 ITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 46 ~~~R~tFiId~dG~I~~~~~ 65 (75)
....-.|.||++|+|..+.+
T Consensus 25 G~V~v~~~i~~~G~v~~~~v 44 (90)
T 1u07_A 25 GQVKVKFDVTPDGRVDNVQI 44 (90)
T ss_dssp EEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEEEECCCCCEEEEEE
Confidence 35678999999999987654
No 173
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=64.38 E-value=1.9 Score=24.39 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=18.7
Q ss_pred CchHHHHHcCCccccccCCcccCccceeEEEECC-CCcE
Q psy13814 23 ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP-DRKL 60 (75)
Q Consensus 23 ~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~-dG~I 60 (75)
.+.++++.||+. ..++++++|+ +|++
T Consensus 66 ~~~~~~~~~~v~------------~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 66 EGQELARRYRVP------------GTPTFVFLVPKAGAW 92 (130)
Confidence 456677777763 4578999996 5887
No 174
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=59.48 E-value=14 Score=19.91 Aligned_cols=39 Identities=21% Similarity=0.331 Sum_probs=25.8
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.||+. ..++++++ ++|++...+.
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 93 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEIS------------AVPYFIII-HKGTILKELS 93 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEC
T ss_pred CEEEEEEecccCHHHHHHcCCC------------cccEEEEE-ECCEEEEEec
Confidence 3555444 46788999999984 23455555 7898876554
No 175
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=59.31 E-value=6.3 Score=21.57 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=13.9
Q ss_pred ceeEEEECCCCcEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~ 64 (75)
.=+++++|++|+|.++-
T Consensus 15 ~~gviv~D~~g~I~~~N 31 (121)
T 4hi4_A 15 SANVMIADNDLNIIYMN 31 (121)
T ss_dssp SSEEEEEETTCBEEEEC
T ss_pred CccEEEEcCCCeEEEec
Confidence 35789999999998763
No 176
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=58.69 E-value=7 Score=18.95 Aligned_cols=14 Identities=14% Similarity=0.240 Sum_probs=11.7
Q ss_pred eEEEECCCCcEEEE
Q psy13814 50 AVYIIGPDRKLKLS 63 (75)
Q Consensus 50 ~tFiId~dG~I~~~ 63 (75)
+.+++|++|+|.+.
T Consensus 4 ~i~~~d~~g~i~~~ 17 (96)
T 3a0s_A 4 AIITLSKDGRITEW 17 (96)
T ss_dssp EEEEEETTSBEEEE
T ss_pred eEEEEcCCCCEeeh
Confidence 57899999998865
No 177
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=58.44 E-value=18 Score=19.19 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=24.9
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|- +=.|.+.+++++||+. ..++++++ ++|++...+.
T Consensus 56 ~~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~g~~~~~~~ 95 (111)
T 3uvt_A 56 GVKIAEVDCTAERNICSKYSVR------------GYPTLLLF-RGGKKVSEHS 95 (111)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEEEEEEC
T ss_pred ceEEEEEeccccHhHHHhcCCC------------cccEEEEE-eCCcEEEecc
Confidence 45543 3346788999999984 23445555 7888766543
No 178
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.36 E-value=9.1 Score=20.12 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=13.1
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.-+.+++|++|+|.++
T Consensus 17 ~~~i~~~D~~g~I~~~ 32 (115)
T 3b33_A 17 VTATLILDDGLAIRYA 32 (115)
T ss_dssp SSEEEEECTTCBEEEE
T ss_pred CceEEEECCCCcEEEE
Confidence 3578999999999865
No 179
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=58.34 E-value=17 Score=22.35 Aligned_cols=38 Identities=11% Similarity=0.178 Sum_probs=26.3
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEE
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~ 63 (75)
..+.|-.+ .|.+.++++.||+. ..++++++ ++|++...
T Consensus 145 ~~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~ 183 (210)
T 3apq_A 145 GLLRIGAVNCGDDRMLCRMKGVN------------SYPSLFIF-RSGMAAVK 183 (210)
T ss_dssp TTBEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-CTTSCCEE
T ss_pred CceEEEEEECCccHHHHHHcCCC------------cCCeEEEE-ECCCceeE
Confidence 34665444 47788999999984 23567777 88987544
No 180
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=57.59 E-value=13 Score=21.33 Aligned_cols=21 Identities=19% Similarity=0.208 Sum_probs=17.6
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..|+.||+|.+.....+|.
T Consensus 108 ~~~~~~~DPdG~~iel~~~~~ 128 (150)
T 3bqx_A 108 GLRGYVADPDGHIWEIAFNPV 128 (150)
T ss_dssp SEEEEEECTTCCEEEEEECTT
T ss_pred CEEEEEECCCCCEEEEEeCCC
Confidence 489999999999988877654
No 181
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=57.14 E-value=8.5 Score=21.46 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=27.4
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECC---CCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP---DRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~---dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.||+. ..+++++++. +|++...+.
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~------------~~Pt~~~~~~~~~~G~~~~~~~ 97 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVS------------SIPALFFVKKEGNEIKTLDQFV 97 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------------SSSEEEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECCCCHHHHHhcCCC------------CCCEEEEEeCCCCcceEEEeec
Confidence 4555433 46788999999984 3467788865 488776654
No 182
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=57.11 E-value=17 Score=20.58 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=25.2
Q ss_pred CCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|- +=.|.+.+++++||+. ..++ |++.++|++...+.
T Consensus 68 ~v~~~~vd~d~~~~l~~~~~v~------------~~Pt-~~i~~~G~~~~~~~ 107 (125)
T 1r26_A 68 TVKFAKVDADNNSEIVSKCRVL------------QLPT-FIIARSGKMLGHVI 107 (125)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------------SSSE-EEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCHHHHHHcCCC------------cccE-EEEEeCCeEEEEEe
Confidence 35543 3356788999999984 2233 55558999876554
No 183
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=57.10 E-value=13 Score=23.73 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=27.7
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.|--+ .|.+.++++.||+. ..++++++ ++|++...+.-
T Consensus 58 ~~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~g 98 (287)
T 3qou_A 58 QFILAKLDCDAEQMIAAQFGLR------------AIPTVYLF-QNGQPVDGFQG 98 (287)
T ss_dssp SSEEEEEETTTCHHHHHTTTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred CeEEEEEeCccCHHHHHHcCCC------------CCCeEEEE-ECCEEEEEeeC
Confidence 4555443 47788999999984 23567777 78988776553
No 184
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=56.34 E-value=16 Score=20.42 Aligned_cols=20 Identities=5% Similarity=-0.105 Sum_probs=16.4
Q ss_pred eeEEEECCCCcEEEEEEcCC
Q psy13814 49 RAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~~ 68 (75)
|..++.||||.+......+.
T Consensus 110 ~~~~~~DPdG~~iel~~~~~ 129 (136)
T 2rk0_A 110 WILAFRDADNIALEAMLGRE 129 (136)
T ss_dssp EEEEEECTTCCEEEEEEECT
T ss_pred eEEEEECCCCCEEEEEEcCC
Confidence 88999999999887776543
No 185
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=56.29 E-value=12 Score=20.06 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=24.9
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.+++++||+. ..++.+++ ++|++...+.
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 96 (113)
T 1ti3_A 57 NVTFLKVDVDELKAVAEEWNVE------------AMPTFIFL-KDGKLVDKTV 96 (113)
T ss_dssp SEEEEEEETTTCHHHHHHHHCS------------STTEEEEE-ETTEEEEEEE
T ss_pred CcEEEEEEccccHHHHHhCCCC------------cccEEEEE-eCCEEEEEEe
Confidence 3544333 46788999999974 22344444 7899876654
No 186
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=56.29 E-value=13 Score=21.17 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=16.1
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..|+.||||.......+..
T Consensus 125 ~~~~~~~DPdG~~iEl~~~~~ 145 (152)
T 3huh_A 125 IMSIYIRDPDGNLIEISQYVE 145 (152)
T ss_dssp EEEEEEECTTCCEEEEEEC--
T ss_pred EEEEEEECCCCCEEEEEeccc
Confidence 488999999999887776654
No 187
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=56.23 E-value=22 Score=24.01 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=20.6
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|++|+||.+....+||.+
T Consensus 295 ~~~VDf~~~~dg~~~vlEvNt~P 317 (357)
T 4fu0_A 295 FSRVDMFYTPSGEIVFNEVNTIP 317 (357)
T ss_dssp EEEEEEEECTTCCEEEEEEESSC
T ss_pred eEEEEEEEeCCCCEEEEEEeCCC
Confidence 67889999999999999999865
No 188
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.67 E-value=10 Score=21.07 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=24.6
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL 60 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I 60 (75)
++.|--+ .|.+.++++.||+. ..++++++ ++|++
T Consensus 55 ~v~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~~ 89 (126)
T 1x5e_A 55 EVNIAKVDVTEQPGLSGRFIIN------------ALPTIYHC-KDGEF 89 (126)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC------------SSSEEEEE-ETTEE
T ss_pred CeEEEEEECcCCHHHHHHcCCc------------ccCEEEEE-eCCeE
Confidence 4555444 57788999999984 34677888 88985
No 189
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=55.01 E-value=24 Score=19.44 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=24.8
Q ss_pred Ccee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 15 FPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 15 l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
+.|- +=.|.+.++++.||+. ..++++++ ++|++.....
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 105 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIR------------AMPTFVFF-KNGQKIDTVV 105 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCC------------SSSEEEEE-ETTEEEEEEE
T ss_pred EEEEEEECcCCHHHHHHcCCC------------cccEEEEE-ECCeEEeeEc
Confidence 5543 3357788999999984 22345555 6898876654
No 190
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=54.59 E-value=21 Score=18.56 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=24.5
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.++++.||+. ..++ +++..+|++...+.
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~------------~~Pt-~~~~~~g~~~~~~~ 89 (104)
T 2vim_A 50 EVEFAKVDVDQNEEAAAKYSVT------------AMPT-FVFIKDGKEVDRFS 89 (104)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------------SSSE-EEEEETTEEEEEEE
T ss_pred CCEEEEEeccCCHHHHHHcCCc------------cccE-EEEEeCCcEEEEEe
Confidence 4554333 46678899999984 2234 44446898876554
No 191
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=54.33 E-value=15 Score=21.04 Aligned_cols=19 Identities=32% Similarity=0.558 Sum_probs=14.8
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.|..|+.||||.......|
T Consensus 129 ~~~~~~~DPdGn~iEl~~y 147 (147)
T 3zw5_A 129 IMSIYFRDPDRNLIEVSNY 147 (147)
T ss_dssp EEEEEEECTTCCEEEEEEC
T ss_pred eEEEEEECCCCCEEEEecC
Confidence 4688999999998766543
No 192
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=54.12 E-value=12 Score=19.38 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=12.3
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+.|++|++|+|.++
T Consensus 24 ~~i~~~d~~g~i~~~ 38 (118)
T 3olo_A 24 EASFCLGDNWQFLYV 38 (118)
T ss_dssp SEEEEECTTSBEEEE
T ss_pred ceEEEECCCCcEEEE
Confidence 467899999998765
No 193
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=54.05 E-value=17 Score=20.31 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=14.6
Q ss_pred eeEEEECCCCcEEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~ 65 (75)
|..++.||||....++.
T Consensus 114 ~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 88999999999877654
No 194
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=53.84 E-value=16 Score=20.05 Aligned_cols=20 Identities=15% Similarity=0.032 Sum_probs=15.3
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..|+.||+|.....+..+
T Consensus 108 ~~~~~~~DPdG~~iel~~~~ 127 (135)
T 1f9z_A 108 TVIAFVEDPDGYKIELIEEK 127 (135)
T ss_dssp CEEEEEECTTSCEEEEEEC-
T ss_pred eeEEEEECCCCCEEEEEecC
Confidence 46788999999987776554
No 195
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=53.66 E-value=12 Score=20.23 Aligned_cols=16 Identities=6% Similarity=0.032 Sum_probs=13.1
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.=+.+++|++|+|.++
T Consensus 22 ~~~i~~~D~~g~i~~~ 37 (118)
T 3fg8_A 22 GLGFMALDEDLRIIYV 37 (118)
T ss_dssp TCEEEEECTTCBEEEE
T ss_pred CceEEEECCCCeEEEE
Confidence 3468999999999865
No 196
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=51.81 E-value=15 Score=20.62 Aligned_cols=20 Identities=20% Similarity=-0.046 Sum_probs=16.5
Q ss_pred ccceeEEEECCCCcEEEEEE
Q psy13814 46 ITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 46 ~~~R~tFiId~dG~I~~~~~ 65 (75)
....-.|.||++|+|..+.+
T Consensus 40 G~V~v~f~I~~~G~v~~~~v 59 (106)
T 2k9k_A 40 GFVTLSFTIDTTGKAVDINV 59 (106)
T ss_dssp CEEEEEEEEETTTEEEEEEE
T ss_pred eEEEEEEEECCCCcEEEEEE
Confidence 36788999999999987665
No 197
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=51.44 E-value=18 Score=20.38 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=16.4
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..|+.||+|.......+.
T Consensus 114 ~~~~~~~DPdG~~iel~~~~ 133 (141)
T 2rbb_A 114 WYQAVLLDPERNVFRINNVL 133 (141)
T ss_dssp EEEEEEECTTSCEEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEEcc
Confidence 68899999999988776544
No 198
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=51.29 E-value=13 Score=20.91 Aligned_cols=21 Identities=10% Similarity=0.097 Sum_probs=14.7
Q ss_pred ceeEEEECCCCcEEEEEEcCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~ 69 (75)
.| .++.||||.+.....++.+
T Consensus 103 ~~-~~~~DPdGn~iel~~~~~~ 123 (128)
T 3g12_A 103 KK-AIVLDPDGHSIELCELEGH 123 (128)
T ss_dssp EE-EEEECTTCCEEEEEC----
T ss_pred cE-EEEECCCCCEEEEEEeccc
Confidence 45 8999999999888777654
No 199
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=50.99 E-value=19 Score=20.18 Aligned_cols=20 Identities=15% Similarity=0.057 Sum_probs=16.4
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..++.||+|.+.......
T Consensus 110 ~~~~~~~DPdG~~iel~~~~ 129 (138)
T 2a4x_A 110 QRYAIVKDPDGNVVDLFAPL 129 (138)
T ss_dssp EEEEEEECTTCCEEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCC
Confidence 58899999999988776554
No 200
>4exo_A Methyl-accepting chemotaxis protein; signaling protein, chemotaxis receptor, PAS domain, four HEL bundle; HET: MSE; 1.90A {Vibrio parahaemolyticus}
Probab=50.77 E-value=6.8 Score=23.29 Aligned_cols=24 Identities=13% Similarity=0.301 Sum_probs=17.9
Q ss_pred EEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 51 VYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 51 tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.||+|.+|++...-.+|.-.|.|+
T Consensus 60 ~fv~d~~G~~l~hp~~p~l~Gk~~ 83 (146)
T 4exo_A 60 FFAYDSQGINTLHAIKPSLEGKNL 83 (146)
T ss_dssp CEEECTTSBEEEESSCGGGTTCBC
T ss_pred EEEEeCCCcEEEecCChhhcCCCc
Confidence 689999999865545666677764
No 201
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=50.38 E-value=16 Score=20.55 Aligned_cols=21 Identities=14% Similarity=0.115 Sum_probs=16.6
Q ss_pred cceeEEEECCCCcEEEEEEcC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~ 67 (75)
..|..++.||+|........+
T Consensus 103 ~~~~~~~~DPdG~~iel~~~~ 123 (139)
T 1r9c_A 103 EGRSIYFYDDDNHMFELHTGT 123 (139)
T ss_dssp -CCEEEEECTTSCEEEEECCC
T ss_pred CeEEEEEECCCCCEEEEEeCC
Confidence 458899999999988777654
No 202
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=55.40 E-value=3.4 Score=21.84 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=20.3
Q ss_pred ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 21 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 21 sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
.|.+.++++.||+. ..++++++ ++|++...+
T Consensus 59 ~~~~~~~~~~~~v~------------~~Pt~~~~-~~g~~~~~~ 89 (106)
T 2yj7_A 59 VDENPNTAAQYGIR------------SIPTLLLF-KNGQVVDRL 89 (106)
Confidence 45566777777763 34567777 788876544
No 203
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=49.78 E-value=19 Score=21.03 Aligned_cols=21 Identities=19% Similarity=-0.020 Sum_probs=17.4
Q ss_pred cceeEEEECCCCcEEEEEEcC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~ 67 (75)
..|..++.||||........|
T Consensus 113 g~~~~~~~DPdG~~iel~~~~ 133 (160)
T 3r4q_A 113 GSYSVYIRDPAGNSVEVGEGK 133 (160)
T ss_dssp SCEEEEEECTTCCEEEEEEGG
T ss_pred CcEEEEEECCCCCEEEEEeCC
Confidence 368999999999988777655
No 204
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=49.71 E-value=15 Score=19.61 Aligned_cols=15 Identities=13% Similarity=0.111 Sum_probs=12.5
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+.+++|++|+|.++
T Consensus 16 ~~i~~~d~~g~i~~~ 30 (120)
T 2gj3_A 16 IAISITDLKANILYA 30 (120)
T ss_dssp SEEEEECTTCBEEEE
T ss_pred CeEEEECCCCCEEee
Confidence 367899999999865
No 205
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=49.36 E-value=21 Score=19.92 Aligned_cols=21 Identities=10% Similarity=-0.105 Sum_probs=16.7
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..++.||+|..........
T Consensus 104 ~~~~~~~DPdG~~iel~~~~~ 124 (137)
T 3itw_A 104 LRQYLVRDLEGHLWEFTRHLR 124 (137)
T ss_dssp EEEEEEECSSSCEEEEEECC-
T ss_pred cEEEEEECCCCCEEEEEEEcC
Confidence 489999999999888776543
No 206
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=49.18 E-value=12 Score=19.69 Aligned_cols=17 Identities=0% Similarity=0.010 Sum_probs=13.4
Q ss_pred cceeEEEECCCCcEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~ 63 (75)
..=+.+++|++|+|.++
T Consensus 28 ~~~~i~~~d~~g~i~~~ 44 (125)
T 3fc7_A 28 SPDGIVHLTTNGTILSV 44 (125)
T ss_dssp SCCEEEEEETTSBEEEE
T ss_pred CCCeEEEEcCCCeEEEE
Confidence 34578999999998765
No 207
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=48.94 E-value=20 Score=20.75 Aligned_cols=20 Identities=10% Similarity=0.024 Sum_probs=15.9
Q ss_pred eeEEEECCCCcEEEEEEcCC
Q psy13814 49 RAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~~ 68 (75)
|..++.||+|....+.....
T Consensus 106 ~~~~~~DPdG~~iel~~~~~ 125 (148)
T 3rhe_A 106 YTFVGVDPDEHRLRIFCLKR 125 (148)
T ss_dssp EEEEEECTTCCEEEEEEEC-
T ss_pred cEEEEECCCCCEEEEEEcCh
Confidence 88999999999877766544
No 208
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=48.77 E-value=20 Score=19.67 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=16.7
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..++.||+|........+.
T Consensus 104 ~~~~~~~DPdG~~iel~~~~~ 124 (133)
T 2p7o_A 104 GRSIYFYDFDNHLFELHAGTL 124 (133)
T ss_dssp CCEEEEECSSSCEEEEECSSC
T ss_pred eeEEEEECCCCCEEEEEcCCh
Confidence 488999999999887765543
No 209
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=48.69 E-value=12 Score=19.73 Aligned_cols=16 Identities=6% Similarity=0.399 Sum_probs=13.2
Q ss_pred ceeEEEECCC-CcEEEE
Q psy13814 48 VRAVYIIGPD-RKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~d-G~I~~~ 63 (75)
.-+.+++|++ |+|.++
T Consensus 8 ~~~i~~~d~~~g~I~~~ 24 (114)
T 1ll8_A 8 NKAIFTVDAKTTEILVA 24 (114)
T ss_dssp TCEEEEEETTTCBEEEE
T ss_pred CceEEEEECCCCeEEEe
Confidence 3578999999 999865
No 210
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=48.64 E-value=11 Score=23.09 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=26.7
Q ss_pred CCceeEEe-cCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 14 DFPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 14 ~l~fpLls-D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
++.|-.++ |.+.+++++|+-.. ....++++++|++|++...+
T Consensus 85 ~v~~~~v~~d~~~~~~~~~~~~~---------v~~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 85 NIELAIISKGRAEDDLRQRLALE---------RIAIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp TEEEEEECHHHHHHHTTTTTTCS---------SCCSSEEEEECTTCCEEEEE
T ss_pred CcEEEEEECCCCHHHHHHHHHcC---------CCCcCeEEEECCCCCEEEEE
Confidence 34454443 45566777776210 13678999999999987655
No 211
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=48.38 E-value=20 Score=21.21 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=18.1
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
.=.+|-+|.||+|...+.+++-.|
T Consensus 101 g~dv~~fd~dGkI~~~~~~~d~~~ 124 (131)
T 3er7_A 101 GTDIARLNADGKIVYLANVPDDTA 124 (131)
T ss_dssp EEEEEEECTTSCEEEEEEEECCC-
T ss_pred eeEEEEEcCCCcEEEEEEccChHH
Confidence 336777898999999998876543
No 212
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.36 E-value=35 Score=19.16 Aligned_cols=45 Identities=7% Similarity=0.111 Sum_probs=27.8
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|--+ .|.+.++++.|++..... ....++++++ ++|++.....
T Consensus 59 ~v~~~~vd~~~~~~~~~~~~v~~~~~------~~~~Pt~~~~-~~G~~~~~~~ 104 (137)
T 2dj0_A 59 GLNFGKVDVGRYTDVSTRYKVSTSPL------TKQLPTLILF-QGGKEAMRRP 104 (137)
T ss_dssp SCEEEECCTTTCHHHHHHTTCCCCSS------SSCSSEEEEE-SSSSEEEEES
T ss_pred CeEEEEEeCccCHHHHHHccCcccCC------cCCCCEEEEE-ECCEEEEEec
Confidence 4555443 467888999999852110 0134567777 7899876554
No 213
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=47.51 E-value=25 Score=19.19 Aligned_cols=18 Identities=17% Similarity=0.063 Sum_probs=14.8
Q ss_pred ceeEEEECCCCcEEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~ 65 (75)
.|..++.||+|.......
T Consensus 106 ~~~~~~~DPdG~~iel~~ 123 (126)
T 2qqz_A 106 VIRFYVSDPFGNRIEFME 123 (126)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred eeEEEEECCCCCEEEEEe
Confidence 588999999999876654
No 214
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=47.26 E-value=17 Score=19.55 Aligned_cols=15 Identities=7% Similarity=0.235 Sum_probs=11.9
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+.|++|++|+|.++
T Consensus 22 d~i~~~d~~g~i~~v 36 (117)
T 2r78_A 22 DGIFIMDAEGHYLDV 36 (117)
T ss_dssp SEEEEECTTSBEEEE
T ss_pred ceEEEECCCCCEEEe
Confidence 367899999988654
No 215
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=47.02 E-value=24 Score=20.42 Aligned_cols=19 Identities=11% Similarity=0.037 Sum_probs=15.5
Q ss_pred eeEEEECCCCcEEEEEEcC
Q psy13814 49 RAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~ 67 (75)
|..++.||+|.+......+
T Consensus 101 ~~~~~~DPdG~~iel~~~~ 119 (144)
T 3r6a_A 101 RNMTVRHSDGSVIEYVEHS 119 (144)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEEcC
Confidence 7899999999987776544
No 216
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=46.89 E-value=15 Score=22.33 Aligned_cols=47 Identities=6% Similarity=0.091 Sum_probs=29.9
Q ss_pred hhcCCCCC-CceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 7 YCLDIKGD-FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 7 ~~~~~k~~-l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
++.+...+ +.|--+ .|.+.+++.+|||. ..++..++ ++|++.....-
T Consensus 61 la~e~~g~~v~~~KVdvDe~~~lA~~ygV~------------sIPTlilF-k~G~~v~~~~G 109 (140)
T 2qgv_A 61 LLHEFPDYTWQVAIADLEQSEAIGDRFGAF------------RFPATLVF-TGGNYRGVLNG 109 (140)
T ss_dssp HHTTCTTSCCEEEECCHHHHHHHHHHHTCC------------SSSEEEEE-ETTEEEEEEES
T ss_pred HHHHcCCCeEEEEEEECCCCHHHHHHcCCc------------cCCEEEEE-ECCEEEEEEec
Confidence 33333344 655333 57789999999985 34555555 78988776653
No 217
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=46.61 E-value=28 Score=21.00 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=28.5
Q ss_pred CCCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEcC
Q psy13814 13 GDFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 13 ~~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~~ 67 (75)
.++.|--+ .|.+.+++.+|||. ..++..++ ++|++.....-.
T Consensus 66 ~~v~~~KVdvDe~~~la~~ygV~------------siPTlilF-kdG~~v~~~vG~ 108 (137)
T 2qsi_A 66 GRLVAAEVAAEAERGLMARFGVA------------VCPSLAVV-QPERTLGVIAKI 108 (137)
T ss_dssp TTEEEEEECGGGHHHHHHHHTCC------------SSSEEEEE-ECCEEEEEEESC
T ss_pred CCcEEEEEECCCCHHHHHHcCCc------------cCCEEEEE-ECCEEEEEEeCC
Confidence 45554333 57889999999995 34566666 789887766543
No 218
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=46.57 E-value=13 Score=19.74 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=11.5
Q ss_pred eEEEECCCCcEEEE
Q psy13814 50 AVYIIGPDRKLKLS 63 (75)
Q Consensus 50 ~tFiId~dG~I~~~ 63 (75)
+.+++|++|+|.+.
T Consensus 5 ~i~~~d~~g~i~~~ 18 (119)
T 2vv6_A 5 AMIVIDGHGIIQLF 18 (119)
T ss_dssp EEEEEETTSBEEEE
T ss_pred eEEEECCCCeEEEE
Confidence 57899999998764
No 219
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=46.53 E-value=13 Score=21.29 Aligned_cols=16 Identities=6% Similarity=0.245 Sum_probs=13.2
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.=+.+++|++|+|.++
T Consensus 17 ~d~i~~~D~~g~I~~~ 32 (129)
T 3mfx_A 17 TEAMILVNANGFIRSC 32 (129)
T ss_dssp SSEEEEEETTSBEEEE
T ss_pred CceEEEECCCCEEEeE
Confidence 3568999999999875
No 220
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=46.34 E-value=27 Score=17.28 Aligned_cols=25 Identities=20% Similarity=0.326 Sum_probs=17.0
Q ss_pred chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEE
Q psy13814 24 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 24 ~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~ 63 (75)
+.+++++||+. ..+++++ +|++...
T Consensus 39 ~~~~~~~~~v~------------~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 39 EMDQILEAGLT------------ALPGLAV---DGELKIM 63 (77)
T ss_dssp SHHHHHHHTCS------------SSSCEEE---TTEEEEC
T ss_pred CHHHHHHCCCC------------cCCEEEE---CCEEEEc
Confidence 78999999984 2344444 7887543
No 221
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=46.33 E-value=22 Score=19.03 Aligned_cols=16 Identities=13% Similarity=0.156 Sum_probs=13.1
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.|..|+.||+|.+...
T Consensus 109 ~~~~~~~DPdG~~iel 124 (126)
T 2p25_A 109 KKMTFFFDPDGLPLEL 124 (126)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred cEEEEEECCCCCEEEe
Confidence 4788999999987654
No 222
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=46.28 E-value=16 Score=22.75 Aligned_cols=25 Identities=16% Similarity=0.323 Sum_probs=17.7
Q ss_pred eeEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 49 RAVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
-.+||+|.+|+|......+.. |.++
T Consensus 167 g~~~l~d~~G~ii~~~p~~~~-g~~~ 191 (254)
T 3lif_A 167 GSISLLHSDGRLLIQWPSLQT-GRDM 191 (254)
T ss_dssp CEEEEEETTSBEEEEETTCCC-SCBC
T ss_pred cEEEEEeCCCcEEEECCCCcc-CCCc
Confidence 468999999999877544443 5543
No 223
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=46.07 E-value=22 Score=20.48 Aligned_cols=19 Identities=11% Similarity=-0.073 Sum_probs=14.8
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
-|..|+-||||.+......
T Consensus 133 g~~~~f~DPdGn~iel~q~ 151 (155)
T 4g6x_A 133 VVTAILDDTCGNLIQLMQI 151 (155)
T ss_dssp CEEEEEECSSSCEEEEEEC
T ss_pred eEEEEEECCCCCEEEEEEE
Confidence 3778999999998766543
No 224
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=45.99 E-value=19 Score=18.15 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=19.7
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL 60 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I 60 (75)
++.|-.+ .|.+.+++++||+. ..+++++ +|++
T Consensus 33 ~~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~---~G~~ 65 (85)
T 1nho_A 33 KIDVEKIDIMVDREKAIEYGLM------------AVPAIAI---NGVV 65 (85)
T ss_dssp SCCEEEECTTTCGGGGGGTCSS------------CSSEEEE---TTTE
T ss_pred CeEEEEEECCCCHHHHHhCCce------------eeCEEEE---CCEE
Confidence 4554333 35677888888873 2345555 7887
No 225
>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A
Probab=45.74 E-value=26 Score=19.29 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=14.4
Q ss_pred eeEEEECCCCcEEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~ 65 (75)
|..++.||+|.......
T Consensus 104 ~~~~~~DPdG~~iel~~ 120 (124)
T 1xrk_A 104 REFALRDPAGNCVHFVA 120 (124)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred CEEEEECCCCCEEEEEE
Confidence 88999999999876654
No 226
>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A
Probab=44.70 E-value=26 Score=19.22 Aligned_cols=17 Identities=12% Similarity=0.044 Sum_probs=13.9
Q ss_pred eeEEEECCCCcEEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~ 65 (75)
|..++.||+|.......
T Consensus 104 ~~~~~~DPdG~~iel~~ 120 (122)
T 1qto_A 104 REFAVRDPAGNCVHFTA 120 (122)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred cEEEEECCCCCEEEEec
Confidence 88899999999876543
No 227
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=44.50 E-value=16 Score=19.90 Aligned_cols=35 Identities=9% Similarity=0.010 Sum_probs=25.2
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL 60 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I 60 (75)
++.|--+ .|.+.++++.||+. ..+++++++++|.+
T Consensus 53 ~~~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 53 KVRAGKVDCQAYPQTCQKAGIK------------AYPSVKLYQYERAK 88 (122)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC------------SSSEEEEEEEEGGG
T ss_pred CeEEEEEeCcCCHHHHHHcCCC------------ccceEEEEeCCCcc
Confidence 5665444 46788999999984 35788888877764
No 228
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=44.46 E-value=20 Score=18.93 Aligned_cols=14 Identities=7% Similarity=0.143 Sum_probs=11.6
Q ss_pred eEEEECCCCcEEEE
Q psy13814 50 AVYIIGPDRKLKLS 63 (75)
Q Consensus 50 ~tFiId~dG~I~~~ 63 (75)
+.+++|++|+|.++
T Consensus 29 ~i~~~d~~g~i~~~ 42 (126)
T 3bwl_A 29 MIDVLDADGTICEV 42 (126)
T ss_dssp EEEEECTTCBEEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 57899999998764
No 229
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=44.35 E-value=29 Score=19.44 Aligned_cols=20 Identities=20% Similarity=0.159 Sum_probs=16.1
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..++.||+|........+
T Consensus 99 ~~~~~~~DPdG~~iel~~~~ 118 (141)
T 1npb_A 99 GASFYFLDPDGHKLELHVGS 118 (141)
T ss_dssp SEEEEEECTTCCEEEEEECC
T ss_pred eeEEEEECCCCCEEEEEECc
Confidence 48899999999988776543
No 230
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=44.00 E-value=28 Score=20.04 Aligned_cols=19 Identities=11% Similarity=-0.018 Sum_probs=15.5
Q ss_pred eeEEEECCCCcEEEEEEcC
Q psy13814 49 RAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~ 67 (75)
|..++.||+|.+......+
T Consensus 127 ~~~~~~DPdG~~iel~~~~ 145 (148)
T 2r6u_A 127 FAAYFTDSEGNVVGLWETA 145 (148)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEecC
Confidence 8899999999987776543
No 231
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=43.97 E-value=20 Score=21.74 Aligned_cols=29 Identities=14% Similarity=0.063 Sum_probs=20.5
Q ss_pred chHHHHHcCCccccccCCcccCccceeEEEECCC-CcEEEEE
Q psy13814 24 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPD-RKLKLSI 64 (75)
Q Consensus 24 ~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~d-G~I~~~~ 64 (75)
+..+++.|++. ..+..+++|++ |.....+
T Consensus 90 ~~~l~~~y~v~------------~~P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 90 GQRYIQFYKLG------------DFPYVSILDPRTGQKLVEW 119 (153)
T ss_dssp HHHHHHHHTCC------------SSSEEEEECTTTCCCCEEE
T ss_pred HHHHHHHcCCC------------CCCEEEEEeCCCCcEeeec
Confidence 45688889873 34689999998 7554443
No 232
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=43.06 E-value=29 Score=19.59 Aligned_cols=20 Identities=15% Similarity=-0.032 Sum_probs=15.5
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..++.||||.+......+
T Consensus 117 ~~~~~~~DPdG~~iel~~~~ 136 (145)
T 2rk9_A 117 QKQFMVQTPDGYLFRFCQDI 136 (145)
T ss_dssp EEEEEEECTTCCEEEEEEC-
T ss_pred ceEEEEECCCCCEEEEEEcC
Confidence 48889999999987776543
No 233
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=42.49 E-value=28 Score=19.12 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=14.8
Q ss_pred eEEEECCCCcEEEEEEcCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~ 68 (75)
.+|-+|.+|+|...+.|-+
T Consensus 103 ~~~~~~~dGkI~~~~~~~d 121 (131)
T 1oh0_A 103 DVMRFDEHGRIQTMQAYWS 121 (131)
T ss_dssp EEEEECTTSCEEEEEEECC
T ss_pred EEEEECCCCcEEhHHhhcC
Confidence 4566788999999887754
No 234
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=42.05 E-value=31 Score=18.41 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=14.2
Q ss_pred ceeEEEECCCCcEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~ 64 (75)
.|..++.||+|......
T Consensus 100 ~~~~~~~DPdG~~iel~ 116 (119)
T 2pjs_A 100 VQRLFLRDPFGKLINIL 116 (119)
T ss_dssp CEEEEEECTTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEE
Confidence 58899999999987654
No 235
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=42.02 E-value=28 Score=18.70 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.3
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.|..++.||+|.+...
T Consensus 117 ~~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 117 KKMAFFFDPDGLPLEL 132 (134)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred eEEEEEECCCCCEEEE
Confidence 5889999999987654
No 236
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=41.94 E-value=27 Score=18.77 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=13.2
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.|..|+-||+|.....
T Consensus 110 ~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 110 YYESVVLDPEGNRIEI 125 (127)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 5889999999987654
No 237
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=41.79 E-value=19 Score=19.18 Aligned_cols=16 Identities=13% Similarity=0.083 Sum_probs=13.2
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.|..++.||+|.....
T Consensus 96 ~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 96 AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp CEEEEEEETTTEEEEE
T ss_pred cEEEEEECCCCcEEEE
Confidence 5889999999987654
No 238
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=41.47 E-value=26 Score=19.36 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=24.4
Q ss_pred CCceeE-EecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcE
Q psy13814 14 DFPFAI-IGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKL 60 (75)
Q Consensus 14 ~l~fpL-lsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I 60 (75)
++.|-- =+|.+.+++++|++. ..++++++++.+++
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 70 TFVAARIDGEKYPDVIERMRVS------------GFPTMRYYTRIDKQ 105 (127)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC------------SSSEEEEECSSCSS
T ss_pred CeEEEEEEccccHhHHHhcCCc------------cCCEEEEEeCCCCC
Confidence 344433 356788999999984 34688888877664
No 239
>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}
Probab=41.26 E-value=31 Score=19.56 Aligned_cols=18 Identities=17% Similarity=0.021 Sum_probs=15.0
Q ss_pred ceeEEEECCCCcEEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~ 65 (75)
.|..++.||||.......
T Consensus 126 ~~~~~~~DPdG~~iel~~ 143 (148)
T 3bt3_A 126 ARECSITTTDGCILRFFE 143 (148)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEee
Confidence 588999999999877654
No 240
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=41.15 E-value=17 Score=21.74 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=13.0
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+.+++|++|+|.+.
T Consensus 33 ~gi~v~D~~g~I~~~ 47 (152)
T 3mxq_A 33 FALCIVRNDYVIVKV 47 (152)
T ss_dssp CEEEEEETTSBEEEE
T ss_pred CCEEEEcCCCEEEEE
Confidence 478999999999875
No 241
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=41.02 E-value=16 Score=22.97 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=14.1
Q ss_pred ceeEEEECCCCcEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~ 64 (75)
.-+++++|++|+|.++-
T Consensus 32 ~~~vii~D~~g~I~~~N 48 (233)
T 3vol_A 32 SANVMIADNDLNIIYMN 48 (233)
T ss_dssp SSEEEEEETTSBEEEEC
T ss_pred CCcEEEECCCCcEEEec
Confidence 45789999999998763
No 242
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=40.69 E-value=17 Score=21.52 Aligned_cols=18 Identities=6% Similarity=-0.012 Sum_probs=14.8
Q ss_pred eeEEEECCCCcEEEEEEc
Q psy13814 49 RAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~ 66 (75)
=+.+++|++|+|++.-..
T Consensus 30 ~gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 30 LEITFVNKDDIFQYYNDS 47 (151)
T ss_dssp SEEEEEETTSBEEEECCC
T ss_pred CceEEEcCCCeEEEEeCC
Confidence 468999999999987654
No 243
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=40.59 E-value=32 Score=19.49 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=14.4
Q ss_pred cceeEEEECCCCcEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~ 64 (75)
..|..|+.||||.....+
T Consensus 122 ~~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 122 QAVSLYFADPNGHALEFT 139 (141)
T ss_dssp TEEEEEEECTTCCEEEEE
T ss_pred CceEEEEECCCCCEEEEE
Confidence 358999999999876654
No 244
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=40.47 E-value=19 Score=19.52 Aligned_cols=15 Identities=13% Similarity=0.067 Sum_probs=12.2
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+.+++|++|+|.+.
T Consensus 27 d~i~~~d~~g~i~~~ 41 (130)
T 1d06_A 27 DATVVSATDGTIVSF 41 (130)
T ss_dssp SEEEEEETTSBEEEE
T ss_pred CeEEEECCCCeEEEE
Confidence 467899999998754
No 245
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=39.90 E-value=28 Score=19.92 Aligned_cols=17 Identities=24% Similarity=0.208 Sum_probs=14.0
Q ss_pred ceeEEEECCCCcEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~ 64 (75)
.|..|+.||||......
T Consensus 128 ~~~~~~~DPdG~~iel~ 144 (146)
T 3ct8_A 128 HYAVFCEDPNRIKVEIV 144 (146)
T ss_dssp CCEEEEECTTCCEEEEE
T ss_pred eEEEEEECCCCCEEEEE
Confidence 58899999999877654
No 246
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=39.68 E-value=15 Score=20.63 Aligned_cols=15 Identities=20% Similarity=0.264 Sum_probs=12.4
Q ss_pred eEEEECCCCcEEEEE
Q psy13814 50 AVYIIGPDRKLKLSI 64 (75)
Q Consensus 50 ~tFiId~dG~I~~~~ 64 (75)
-..|||++|+|.+-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 377899999999865
No 247
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=39.67 E-value=28 Score=19.32 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=15.2
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.|..++.||+|........
T Consensus 96 ~~~~~~~DPdG~~iel~~~ 114 (135)
T 1nki_A 96 GDSFYFLDPDGHRLEAHVG 114 (135)
T ss_dssp SCEEEEECTTCCEEEEESC
T ss_pred eEEEEEECCCCCEEEEEEC
Confidence 4889999999998776543
No 248
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=39.56 E-value=9.8 Score=21.96 Aligned_cols=24 Identities=17% Similarity=0.203 Sum_probs=18.0
Q ss_pred eEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.++|.|++|++.. ..++..+|.++
T Consensus 52 ~i~v~d~~G~~~a-~~~~~~iG~~~ 75 (131)
T 1p0z_A 52 YITVGDASGQRLY-HVNPDEIGKSM 75 (131)
T ss_dssp EEEEEETTSBEEE-CSSGGGTTSBC
T ss_pred EEEEEcCCCcEEE-ecChhhCCCcc
Confidence 7899999998643 44667788765
No 249
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=39.33 E-value=33 Score=19.09 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=22.0
Q ss_pred CceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCc
Q psy13814 15 FPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRK 59 (75)
Q Consensus 15 l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~ 59 (75)
+.|--+ .|.+.++++.||+. ..++++++ ++|+
T Consensus 70 v~~~~vd~~~~~~~~~~~~v~------------~~Pt~~~~-~~G~ 102 (140)
T 2dj1_A 70 IAVAKIDATSASMLASKFDVS------------GYPTIKIL-KKGQ 102 (140)
T ss_dssp CEEEEECTTTCHHHHHHTTCC------------SSSEEEEE-ETTE
T ss_pred eEEEEEeCcccHHHHHHCCCC------------ccCeEEEE-ECCc
Confidence 554333 45678999999984 34677778 6787
No 250
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=39.05 E-value=30 Score=18.72 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=13.5
Q ss_pred eeEEEECCCCcEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSI 64 (75)
Q Consensus 49 R~tFiId~dG~I~~~~ 64 (75)
|..++.||+|......
T Consensus 116 ~~~~~~DP~G~~~el~ 131 (133)
T 4hc5_A 116 RATWFSDPDGNQFFLV 131 (133)
T ss_dssp EEEEEECTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 8999999999876654
No 251
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=38.75 E-value=25 Score=18.93 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=14.4
Q ss_pred ceeEEEECCCCcEEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~ 65 (75)
.|..++.||+|.....+.
T Consensus 99 ~~~~~~~DPdG~~iel~~ 116 (118)
T 2i7r_A 99 TESLLVQGPAGLVLDFYR 116 (118)
T ss_dssp CEEEEEECGGGCEEEEEE
T ss_pred cEEEEEECCCccEEEEEe
Confidence 488899999998776543
No 252
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=38.68 E-value=41 Score=18.71 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=14.6
Q ss_pred eEEEECCCCcEEEEEEcCCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~~ 69 (75)
+.|+-||||.+........+
T Consensus 117 g~~~~DPdG~~iel~~~~~~ 136 (139)
T 1twu_A 117 GVTIEDPDGWRIVFMNSKGI 136 (139)
T ss_dssp EEEEECTTCCEEEEESSCCC
T ss_pred CeEEECCCCCEEEEEEcCCC
Confidence 35899999998877654433
No 253
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=38.52 E-value=22 Score=17.91 Aligned_cols=15 Identities=7% Similarity=0.080 Sum_probs=12.3
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
-+.+++|++|+|.+.
T Consensus 14 ~~i~~~d~~g~i~~~ 28 (114)
T 3luq_A 14 AALAMFDREMRYLAV 28 (114)
T ss_dssp SEEEEEETTCBEEEE
T ss_pred ceEEEEcCCcEEEEE
Confidence 467899999998865
No 254
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=38.46 E-value=23 Score=17.75 Aligned_cols=16 Identities=6% Similarity=-0.112 Sum_probs=12.9
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.-+.+++|++|+|.+.
T Consensus 17 ~~~i~~~d~~~~i~~~ 32 (124)
T 3lyx_A 17 FDAIVVTDLQGFIIDW 32 (124)
T ss_dssp SSEEEEEETTCBEEEE
T ss_pred CceEEEECCCCcEeeh
Confidence 3478999999998765
No 255
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=38.26 E-value=51 Score=18.18 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=19.3
Q ss_pred cCchHHHHHcCCccccccCCcccCccceeEEEECCCCc
Q psy13814 22 DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRK 59 (75)
Q Consensus 22 D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~ 59 (75)
|.+..+++.||+. ..++++++++.++
T Consensus 79 d~~~~~~~~~~i~------------~~Pt~~~~~~~~~ 104 (123)
T 1wou_A 79 DPNNDFRKNLKVT------------AVPTLLKYGTPQK 104 (123)
T ss_dssp CTTCHHHHHHCCC------------SSSEEEETTSSCE
T ss_pred chhHHHHHHCCCC------------eeCEEEEEcCCce
Confidence 7889999999984 3467777876433
No 256
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=37.68 E-value=22 Score=18.36 Aligned_cols=16 Identities=19% Similarity=0.316 Sum_probs=12.5
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.-+.+++|++|+|.+.
T Consensus 9 ~~~i~~~d~~g~i~~~ 24 (126)
T 3mjq_A 9 EDMILIINREGRLLYA 24 (126)
T ss_dssp SSEEEEEETTSBEEEE
T ss_pred CceEEEEeCCCcEEEE
Confidence 3467899999998764
No 257
>2qhk_A Methyl-accepting chemotaxis protein; structural genomics, PSI-2, MCSG, protein structur initiative; 1.91A {Vibrio parahaemolyticus}
Probab=37.43 E-value=14 Score=22.24 Aligned_cols=24 Identities=13% Similarity=0.301 Sum_probs=15.7
Q ss_pred EEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 51 VYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 51 tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
.||+|.+|++...-.+|.-.|.|+
T Consensus 67 ~fi~d~~G~~i~hp~~~~l~Gk~~ 90 (174)
T 2qhk_A 67 FFAYDSQGINTLHAIKPSLEGKNL 90 (174)
T ss_dssp CEEECTTSBEEEESSCGGGTTCBC
T ss_pred EEEEeCCCCEEEcCCChhhCCCcc
Confidence 589999999765433444456553
No 258
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=36.85 E-value=34 Score=24.06 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=17.5
Q ss_pred ccceeEEEECCCCcEEEEEEc
Q psy13814 46 ITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 46 ~~~R~tFiId~dG~I~~~~~~ 66 (75)
+...+.+||=|||-|.+.+..
T Consensus 496 ~~~~~~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 496 IGKAGASLVRPDGIVAWRTDE 516 (535)
T ss_dssp CTTTCEEEECTTSBEEEEESS
T ss_pred CCCCceEeeCCCceeEEecCC
Confidence 456779999999999988764
No 259
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=35.60 E-value=42 Score=17.81 Aligned_cols=22 Identities=5% Similarity=-0.162 Sum_probs=15.9
Q ss_pred ceeEEEECCCCcEEEEEEcCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~ 69 (75)
.-.+|-++.+|+|...+.|-++
T Consensus 97 ~~~~~~~~~dGkI~~~~~~~d~ 118 (125)
T 1ohp_A 97 PIDHFRFNGAGKVVSMRALFGE 118 (125)
T ss_dssp CEEEEEECTTSCEEEEEEECCG
T ss_pred EEEEEEECCCCcEEEEEEEECh
Confidence 3445667788999999887543
No 260
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=35.57 E-value=40 Score=18.64 Aligned_cols=18 Identities=28% Similarity=0.578 Sum_probs=14.1
Q ss_pred eeEEEECCCCcEEEEEEc
Q psy13814 49 RAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~ 66 (75)
=.+|-+|.||+|..+..|
T Consensus 102 ~~~~~~~~dGkI~~~~~~ 119 (122)
T 3h3h_A 102 LEVFHFGPDRRVVKALAH 119 (122)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEE
Confidence 457888999999887654
No 261
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=35.21 E-value=33 Score=19.00 Aligned_cols=16 Identities=0% Similarity=0.054 Sum_probs=12.4
Q ss_pred eeEEEECCCCcEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSI 64 (75)
Q Consensus 49 R~tFiId~dG~I~~~~ 64 (75)
=..+++|++|+|.++.
T Consensus 10 d~i~v~d~~G~i~yvn 25 (111)
T 2vlg_A 10 DIHAVLASNGRIIYIS 25 (111)
T ss_dssp CEEEEECTTSBEEEEC
T ss_pred CEEEEEcCCCeEEEEC
Confidence 3578999999987653
No 262
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=34.90 E-value=11 Score=22.79 Aligned_cols=17 Identities=12% Similarity=0.333 Sum_probs=14.0
Q ss_pred cceeEEEECCCCcEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~ 63 (75)
..++++++|++|++...
T Consensus 100 ~~PT~~f~~~~G~~v~~ 116 (151)
T 3ph9_A 100 YVPRIMFVDPSLTVRAD 116 (151)
T ss_dssp CSSEEEEECTTSCBCTT
T ss_pred CCCEEEEECCCCCEEEE
Confidence 56889999999987653
No 263
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=34.88 E-value=83 Score=20.39 Aligned_cols=18 Identities=6% Similarity=-0.103 Sum_probs=13.5
Q ss_pred cceeEEEECCCCcEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~ 64 (75)
..=+.++|+|+|.+...+
T Consensus 112 ~yNs~~~i~~~G~i~~~y 129 (283)
T 3hkx_A 112 RGITAELADEHGEVLASY 129 (283)
T ss_dssp CCBEEEEECTTSCEEEEE
T ss_pred EEEEEEEEcCCCcEEEEE
Confidence 345789999999886543
No 264
>2zyz_A Putative uncharacterized protein PAE0789; crenarchaea, heterotetramer, RNA PROC endonuclease, hydrolase, tRNA processing; 1.70A {Pyrobaculum aerophilum}
Probab=34.69 E-value=44 Score=19.73 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=20.3
Q ss_pred eeEE-EECCCCcEEEEEEcCCCCCCCC
Q psy13814 49 RAVY-IIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 49 R~tF-iId~dG~I~~~~~~~~~~GRn~ 74 (75)
+.+| ++|.+|.|.+..+.-....||.
T Consensus 85 ~~VlAiVd~dg~ItYy~v~~~~~~~~~ 111 (116)
T 2zyz_A 85 PVVLALVSNDGTVTYYYVRKIRLPRNI 111 (116)
T ss_dssp CEEEEEECTTSCEEEEEEEECCCCCCT
T ss_pred EEEEEEEcCCCCEEEEEEEEcccCccc
Confidence 3444 3589999999999888888886
No 265
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=34.48 E-value=38 Score=18.96 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=15.8
Q ss_pred cceeEEEECCCCcEEEEEEc
Q psy13814 47 TVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~ 66 (75)
..|..++.||||.+......
T Consensus 100 ~~~~~~~~DPdG~~iel~~~ 119 (145)
T 3uh9_A 100 DQRSLYFTDPDGHKFEFHTG 119 (145)
T ss_dssp GCCEEEEECTTCCEEEEESS
T ss_pred CeeEEEEEcCCCCEEEEEcC
Confidence 45889999999998776543
No 266
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=34.23 E-value=57 Score=19.74 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=24.8
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~ 65 (75)
++.|-.+ .|.+.++++.||+. ..++++++ ++|++...+.
T Consensus 170 ~v~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~ 209 (226)
T 1a8l_A 170 KILGDMVEAIEYPEWADQYNVM------------AVPKIVIQ-VNGEDRVEFE 209 (226)
T ss_dssp CEEEEEEEGGGCHHHHHHTTCC------------SSCEEEEE-ETTEEEEEEE
T ss_pred cEEEEEEEcccCHHHHHhCCCc------------ccCeEEEE-eCCceeEEEc
Confidence 4554333 56678899999984 23454444 6898766554
No 267
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=34.16 E-value=52 Score=19.15 Aligned_cols=29 Identities=7% Similarity=0.032 Sum_probs=20.7
Q ss_pred HHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 26 DLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 26 ~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.||..|||.. ..+..+++ ++|.+.+...+
T Consensus 71 ~IA~~~~V~h-----------~sPq~il~-k~G~~v~~~SH 99 (112)
T 3iv4_A 71 YIAKKTNVKH-----------ESPQAFYF-VNGEMVWNRDH 99 (112)
T ss_dssp HHHHHHTCCC-----------CSSEEEEE-ETTEEEEEEEG
T ss_pred HHHHHhCCcc-----------CCCeEEEE-ECCEEEEEeec
Confidence 3899999963 34667777 78988776543
No 268
>3ub6_A Chemoreceptor TLPB; homodimer, four-helix bundle, PAS domain, membrane protein; 1.38A {Helicobacter pylori} PDB: 3ub7_A 3ub8_A 3ub9_A*
Probab=33.77 E-value=13 Score=23.01 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=17.4
Q ss_pred eEEEECCCCcEEEEEEcCCCCCCCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPASTGRSV 74 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~~~GRn~ 74 (75)
=.||+|.+|++...-..|.-.|.|+
T Consensus 71 Y~fv~d~~g~~l~hP~~p~l~Gk~~ 95 (181)
T 3ub6_A 71 YMVVVDKNGVVLFDPVNPKTVGQSG 95 (181)
T ss_dssp EEEEECTTCBEEECTTSGGGTTSBC
T ss_pred EEEEEeCCCCEEEeCCChhhcCCcc
Confidence 3689999998765444556677764
No 269
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=33.30 E-value=36 Score=18.57 Aligned_cols=16 Identities=13% Similarity=0.179 Sum_probs=12.7
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.|..|+-||||.+...
T Consensus 115 ~~~~~~~dPdG~~iEl 130 (133)
T 3hdp_A 115 RKVAFLFSTDIGLIEL 130 (133)
T ss_dssp EEEEEEEETTTEEEEE
T ss_pred ceEEEEECCCceEEEE
Confidence 4889999999976554
No 270
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=33.26 E-value=60 Score=19.60 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=17.9
Q ss_pred eeEEEECCCCcEEEEEEcCCC
Q psy13814 49 RAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~~~ 69 (75)
.+.||+|.+|+++.+-.|...
T Consensus 3 ~~i~Il~~~Gk~~lsk~y~~~ 23 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQKWYLAT 23 (158)
T ss_dssp EEEEEECSSSCEEEEEESSCC
T ss_pred EEEEEECCCCCEEEEEeCCCC
Confidence 689999999999988887643
No 271
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=33.06 E-value=29 Score=18.87 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=17.9
Q ss_pred hHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEE
Q psy13814 25 RDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 25 ~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~ 63 (75)
..+++.||+. ..++++++ .+|++...
T Consensus 77 ~~~~~~~~i~------------~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 77 QAFRSRYGIP------------TVPGFVHI-TDGQINVR 102 (118)
T ss_dssp HHHHHHHTCC------------SSCEEEEE-ETTEEEEE
T ss_pred HHHHHHcCCC------------CCCeEEEE-ECCEEEEE
Confidence 5788888874 34567777 48887654
No 272
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=32.80 E-value=52 Score=16.68 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=21.6
Q ss_pred CCCceeEEe---c-CchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEE
Q psy13814 13 GDFPFAIIG---D-ENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 13 ~~l~fpLls---D-~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
.+++|..+- | .+.++++.||+. ..+++|+ +|++.++-
T Consensus 29 ~~~~~~~~~v~~~~~~~~~~~~~gv~------------~vPt~~i---~g~~~~~G 69 (80)
T 2k8s_A 29 SKYTVEIVHLGTDKARIAEAEKAGVK------------SVPALVI---DGAAFHIN 69 (80)
T ss_dssp TTEEEEEEETTTCSSTHHHHHHHTCC------------EEEEEEE---TTEEEEEE
T ss_pred cCCeEEEEEecCChhhHHHHHHcCCC------------cCCEEEE---CCEEEEec
Confidence 445554432 2 356888999873 3455554 68766543
No 273
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=32.52 E-value=33 Score=19.97 Aligned_cols=15 Identities=13% Similarity=0.286 Sum_probs=12.9
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
=+++++|++|+|.+.
T Consensus 91 ~gvi~~D~~g~I~~~ 105 (190)
T 2jhe_A 91 EPVLSVDMKSKVDMA 105 (190)
T ss_dssp SCEEEECTTCBEEEE
T ss_pred CcEEEEcCCCCEEEE
Confidence 468999999999875
No 274
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=32.35 E-value=53 Score=23.75 Aligned_cols=38 Identities=8% Similarity=0.170 Sum_probs=27.6
Q ss_pred CCceeEEe---cCchHHHHHcCCccccccCCcccCccceeEEEECC---CCcEEEE
Q psy13814 14 DFPFAIIG---DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP---DRKLKLS 63 (75)
Q Consensus 14 ~l~fpLls---D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~---dG~I~~~ 63 (75)
.+.|--+. |.+.+++++|||. ..++++++++ +|++...
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~------------~~PTl~~f~~g~~~G~~~~~ 108 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIA------------GFPTVRFFQAFTKNGSGATL 108 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCC------------SBSEEEEECTTCCSCCCEEE
T ss_pred cEEEEEEECCccccHHHHHHcCCc------------ccCEEEEEcCcccCCCceeE
Confidence 46665555 5689999999984 4578999987 6764443
No 275
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=32.25 E-value=43 Score=19.06 Aligned_cols=17 Identities=12% Similarity=0.004 Sum_probs=13.9
Q ss_pred eeEEEECCCCcEEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~ 65 (75)
|..++.||+|.+.....
T Consensus 125 ~~~~~~DPdG~~iel~~ 141 (144)
T 2kjz_A 125 YTFTAADPDSHRLRVYA 141 (144)
T ss_dssp EEEEECCTTCCEEEEEE
T ss_pred eEEEEECCCCCEEEEEe
Confidence 78899999999876653
No 276
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=32.21 E-value=39 Score=22.24 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=17.7
Q ss_pred ccceeEEEECCCCcEEEEEEc
Q psy13814 46 ITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 46 ~~~R~tFiId~dG~I~~~~~~ 66 (75)
....-.|.||+||.|..+.+-
T Consensus 164 G~V~V~f~Id~dG~V~~v~V~ 184 (229)
T 2grx_C 164 GQVKVKFDVTPDGRVDNVQIL 184 (229)
T ss_dssp EEECEEEECCTTSCCEEEEEC
T ss_pred EEEEEEEEECCCCCEEEEEEE
Confidence 467889999999999887765
No 277
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=32.12 E-value=97 Score=19.59 Aligned_cols=25 Identities=12% Similarity=-0.012 Sum_probs=21.3
Q ss_pred cceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
..+.=|+++++|.+....+||.+-+
T Consensus 253 ~~~vD~~~~~~g~~~~iEiN~rpg~ 277 (306)
T 1iow_A 253 WGRIDVMLDSDGQFYLLEANTSPGM 277 (306)
T ss_dssp EEEEEEEECTTSCEEEEEEESSCCC
T ss_pred EEEEEEEEcCCCCEEEEEecCCCCC
Confidence 5688899999999999999998544
No 278
>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6
Probab=32.11 E-value=34 Score=19.03 Aligned_cols=19 Identities=26% Similarity=0.111 Sum_probs=15.2
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.|..|+-||+|.+......
T Consensus 131 ~~~~~~~DPdG~~iel~~~ 149 (153)
T 1ss4_A 131 YRLCYIRGVEGILIGLAEE 149 (153)
T ss_dssp EEEEEEECGGGCEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEec
Confidence 5888999999998776543
No 279
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=31.93 E-value=37 Score=23.71 Aligned_cols=20 Identities=10% Similarity=0.351 Sum_probs=15.9
Q ss_pred cceeEEEECCCCcEEEEEEc
Q psy13814 47 TVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~ 66 (75)
-.-=.|++|++|+|..+.+.
T Consensus 285 nVaW~F~lN~~gkI~~v~i~ 304 (323)
T 3mg1_A 285 NIAWRFLLNPEGKIFFVAID 304 (323)
T ss_dssp EEEEEEEECTTSCEEEEEEE
T ss_pred cceeEEEECCCCcEEEEEeh
Confidence 33557999999999988764
No 280
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=31.88 E-value=88 Score=21.37 Aligned_cols=23 Identities=13% Similarity=0.348 Sum_probs=20.4
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|++|++|.+....+||.+
T Consensus 299 ~~rvDf~~~~dg~~~vlEINt~P 321 (372)
T 3tqt_A 299 MARVDFFVTPNNKVLVNEINTIP 321 (372)
T ss_dssp EEEEEEEECTTCCEEEEEEESSC
T ss_pred EEEEEEEEeCCCcEEEEEEECCC
Confidence 67899999999999999999865
No 281
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=31.41 E-value=23 Score=20.99 Aligned_cols=19 Identities=16% Similarity=0.429 Sum_probs=14.7
Q ss_pred cceeEEEECCCCcEEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSIV 65 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~ 65 (75)
..++++++|++|++.....
T Consensus 103 ~~Pt~~~~d~~G~~~~~~~ 121 (164)
T 1sen_A 103 YIPRILFLDPSGKVHPEII 121 (164)
T ss_dssp CSSEEEEECTTSCBCTTCC
T ss_pred cCCeEEEECCCCCEEEEEe
Confidence 4688999999999875443
No 282
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=31.40 E-value=87 Score=21.25 Aligned_cols=25 Identities=12% Similarity=-0.012 Sum_probs=21.2
Q ss_pred cceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
+.+.=|++++||.+..+.+||..-|
T Consensus 269 ~~~ve~~~~~dG~~~~iEiN~R~gG 293 (425)
T 3vot_A 269 PAHTELRLDKDGTPYVIEVGARIGG 293 (425)
T ss_dssp EEEEEEEECTTCCEEEEEEESSCGG
T ss_pred eEEEEEEEEeCCcEEEEEEecCCCC
Confidence 6678899999999999999997643
No 283
>3tjz_C Coatomer subunit zeta-1; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} PDB: 2hf6_A
Probab=31.37 E-value=53 Score=19.95 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.2
Q ss_pred cceeEEEECCCCcEEEEEEcCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~ 68 (75)
...+.||+|.+|+.+.+-.|..
T Consensus 12 mI~~ililn~~Gk~~lsK~Y~~ 33 (153)
T 3tjz_C 12 TVKAILILDNDGDRLFAKYYDD 33 (153)
T ss_dssp CEEEEEEECTTSCEEEEEECSS
T ss_pred HheEEEEECCCCCEEEEEeCCC
Confidence 5689999999999999888864
No 284
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=31.29 E-value=42 Score=19.81 Aligned_cols=19 Identities=26% Similarity=0.286 Sum_probs=16.9
Q ss_pred eeEEEECCCCcEEEEEEcC
Q psy13814 49 RAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~ 67 (75)
.+.||+|.+|+++.+-.|.
T Consensus 3 ~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEETTSCEEEEEECS
T ss_pred EEEEEEcCCCCEEEEEeCC
Confidence 6899999999999888875
No 285
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=31.18 E-value=45 Score=17.30 Aligned_cols=16 Identities=13% Similarity=-0.056 Sum_probs=12.2
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.=..+++|++|+|.++
T Consensus 9 ~~~i~~~d~~g~i~~~ 24 (117)
T 3f1p_A 9 KTFLSEHSMDMKFTYC 24 (117)
T ss_dssp GEEEEEECTTCBEEEE
T ss_pred ccEEEEECCCceEEEE
Confidence 3456788999998765
No 286
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=31.16 E-value=48 Score=19.26 Aligned_cols=19 Identities=21% Similarity=0.053 Sum_probs=14.9
Q ss_pred ceeEEEECCCCcEEEEEEc
Q psy13814 48 VRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~ 66 (75)
.|..++.||+|.....+..
T Consensus 126 ~~~~~~~DPdG~~iel~~~ 144 (164)
T 3m2o_A 126 QRHFITADPNGVLIDIIKP 144 (164)
T ss_dssp CEEEEEECTTCCEEEEEC-
T ss_pred cEEEEEECCCCCEEEEEEE
Confidence 4889999999998776543
No 287
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=30.98 E-value=38 Score=20.94 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=25.9
Q ss_pred CCCcee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEEEEc
Q psy13814 13 GDFPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 13 ~~l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~~~~ 66 (75)
.++.|- +=.|.+..++++||+. ..++++++ ++|++.....-
T Consensus 61 ~~v~~~~vd~d~~~~l~~~~~v~------------~~Pt~~~~-~~G~~~~~~~G 102 (222)
T 3dxb_A 61 GKLTVAKLNIDQNPGTAPKYGIR------------GIPTLLLF-KNGEVAATKVG 102 (222)
T ss_dssp TTCEEEEEETTTCTTTGGGGTCC------------SBSEEEEE-ETTEEEEEEES
T ss_pred CCcEEEEEECCCCHHHHHHcCCC------------cCCEEEEE-ECCeEEEEecc
Confidence 345543 3457788899999874 23445555 58988766543
No 288
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=30.84 E-value=1.2e+02 Score=20.20 Aligned_cols=25 Identities=16% Similarity=0.194 Sum_probs=21.6
Q ss_pred cceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
..|.=|++|++|.+....+||.+-+
T Consensus 289 ~~~vD~~~~~~g~~~viEiN~rpg~ 313 (364)
T 2i87_A 289 LVRADFFVTEDNQIYINETNAMPGF 313 (364)
T ss_dssp EEEEEEEECTTCCEEEEEEESSCCC
T ss_pred EEEEEEEEecCCCEEEEEEeCCCCC
Confidence 6788899999999999999997554
No 289
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=29.80 E-value=43 Score=16.71 Aligned_cols=16 Identities=19% Similarity=0.393 Sum_probs=12.7
Q ss_pred ceeEEEECC---CCcEEEE
Q psy13814 48 VRAVYIIGP---DRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~---dG~I~~~ 63 (75)
.-+.+++|+ +|+|.+.
T Consensus 7 ~~~i~~~d~~~~~g~i~~~ 25 (115)
T 4eet_B 7 EKNFVITDPRLPDNPIIFA 25 (115)
T ss_dssp CCSEEEECTTSTTCCEEEE
T ss_pred CCcEEEEcCCCCCCcEEEE
Confidence 346789999 9998875
No 290
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=29.76 E-value=47 Score=17.39 Aligned_cols=16 Identities=6% Similarity=-0.008 Sum_probs=12.6
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.=..+++|++|+|.++
T Consensus 12 ~d~i~~~d~~g~i~~~ 27 (121)
T 3f1p_B 12 TRFISRHNIEGIFTFV 27 (121)
T ss_dssp CEEEEEECTTSBEEEE
T ss_pred CceEEEECCCceEEEE
Confidence 3467889999998765
No 291
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=29.73 E-value=96 Score=20.14 Aligned_cols=23 Identities=17% Similarity=0.097 Sum_probs=20.3
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|++|++|.+....+||.+
T Consensus 262 ~~~vD~~~~~~g~~~vlEiN~~p 284 (317)
T 4eg0_A 262 WGRADFMLDAAGNAYFLEVNTAP 284 (317)
T ss_dssp EEEEEEEECTTCCEEEEEEESSC
T ss_pred eEEEEEEEeCCCCEEEEEeeCCC
Confidence 67888999999999999999865
No 292
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=29.54 E-value=1.1e+02 Score=20.22 Aligned_cols=24 Identities=13% Similarity=0.141 Sum_probs=20.8
Q ss_pred cceeEEEECCCCcEEEEEEcCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
..|.=|++|++|.+....+|+.+-
T Consensus 288 ~~~vD~~~~~~g~~~viEiN~rpg 311 (343)
T 1e4e_A 288 LARVDMFLQDNGRIVLNEVNTLPG 311 (343)
T ss_dssp EEEEEEEECTTCCEEEEEEESSCC
T ss_pred EEEEEEEEeCCCCEEEEEeeCCCC
Confidence 678889999999999999998653
No 293
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=29.27 E-value=33 Score=20.71 Aligned_cols=20 Identities=10% Similarity=-0.066 Sum_probs=15.8
Q ss_pred cceeEEEECCCCcEEEEEEc
Q psy13814 47 TVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~ 66 (75)
-.|+++|+|.||-+......
T Consensus 25 gv~~~~lvd~dG~vIa~~~~ 44 (136)
T 3t12_B 25 GARYALLIDRKGFVLAHKEA 44 (136)
T ss_dssp CCSEEEEEETTC-CCEEEEC
T ss_pred CCeEEEEEcCCCCEEEEecc
Confidence 46999999999998877754
No 294
>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}
Probab=29.18 E-value=77 Score=20.38 Aligned_cols=25 Identities=16% Similarity=0.046 Sum_probs=19.8
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
-|..++.||+|.+..++......|.
T Consensus 132 g~~~~~~DP~G~~i~l~~~~~~~~~ 156 (282)
T 3oxh_A 132 GRMSFITDPTGAAVGLWQANRHIGA 156 (282)
T ss_dssp EEEEEEECTTCCEEEEEEESSCCSC
T ss_pred eEEEEEECCCCCEEEEEEccccCCc
Confidence 4889999999999888877665443
No 295
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=28.83 E-value=59 Score=18.16 Aligned_cols=18 Identities=6% Similarity=0.183 Sum_probs=13.8
Q ss_pred eEEEECCCCcEEEEEEcC
Q psy13814 50 AVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~ 67 (75)
..+.++++|+|..++.+-
T Consensus 99 d~l~~~~dGrI~~~~~f~ 116 (121)
T 3dxo_A 99 DVVSLNTEGRIDNVVGFL 116 (121)
T ss_dssp EEEEECTTSSEEEEEEEE
T ss_pred EEEEECCCCCEEEEEEec
Confidence 456678899999987653
No 296
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=27.62 E-value=27 Score=21.55 Aligned_cols=12 Identities=25% Similarity=0.465 Sum_probs=10.2
Q ss_pred eEEEECCCCcEE
Q psy13814 50 AVYIIGPDRKLK 61 (75)
Q Consensus 50 ~tFiId~dG~I~ 61 (75)
--|+|++||.|-
T Consensus 65 YhflI~~dG~Iy 76 (167)
T 2f2l_A 65 YNFLIGGDGNVY 76 (167)
T ss_dssp CSEEECTTSCEE
T ss_pred CcEEEcCCCEEE
Confidence 369999999986
No 297
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=27.49 E-value=44 Score=20.44 Aligned_cols=15 Identities=7% Similarity=-0.035 Sum_probs=12.4
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
-.+||+|++|+|...
T Consensus 164 g~~~l~d~~G~ii~~ 178 (260)
T 3by9_A 164 SYFVATDDHQVVFMS 178 (260)
T ss_dssp CEEEEECTTCBEEEE
T ss_pred CcEEEECCCCeEEEc
Confidence 458999999998764
No 298
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=27.46 E-value=1.1e+02 Score=20.81 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=20.4
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|+++++|.+....+||.+
T Consensus 317 ~~~vDf~~~~dg~~~vlEiN~~P 339 (386)
T 3e5n_A 317 MARVDVFLCADGRIVINEVNTLP 339 (386)
T ss_dssp EEEEEEEECTTCCEEEEEEESSC
T ss_pred EEEEEEEEECCCcEEEEEeECCC
Confidence 67889999999999999999865
No 299
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=27.35 E-value=55 Score=16.91 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=12.9
Q ss_pred cceeEEEECCCCcEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~ 63 (75)
+.-..+++|++|+|.++
T Consensus 12 ~~~~i~~~d~~g~i~~~ 28 (121)
T 2kdk_A 12 PTEFITRFAVNGKFVYV 28 (121)
T ss_dssp SSEEEEEECTTSBEEEE
T ss_pred CccEEEEECCCeeEEEE
Confidence 34467888999998765
No 300
>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*
Probab=27.23 E-value=54 Score=19.26 Aligned_cols=20 Identities=15% Similarity=0.034 Sum_probs=15.7
Q ss_pred ceeEEEECCCCcEEEEEEcC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~ 67 (75)
.|..|+-||+|.+.......
T Consensus 159 ~~~~~~~DPdG~~iel~~~~ 178 (184)
T 2za0_A 159 KGLAFIQDPDGYWIEILNPN 178 (184)
T ss_dssp TTCEEEECTTCCEEEEECTT
T ss_pred eeEEEEECCCCCEEEEEecC
Confidence 46789999999988776543
No 301
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=26.91 E-value=67 Score=20.46 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=18.1
Q ss_pred eEEEECCCCcEEEEEEcCCCCCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~~~GR 72 (75)
..|=||++|+|.+.+.....+|.
T Consensus 245 ~~~~~~~~g~~~W~~~~~~~~~~ 267 (276)
T 3no2_A 245 QLVEIDSEGKVVWQLNDKVKFGM 267 (276)
T ss_dssp SEEEECTTSBEEEEECCTTTSCC
T ss_pred eEEEECCCCCEEEEecCcccccc
Confidence 47888999999988877766664
No 302
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=26.88 E-value=29 Score=21.19 Aligned_cols=15 Identities=13% Similarity=0.330 Sum_probs=12.1
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 62 igyhflI~~dG~I~e 76 (163)
T 1sk4_A 62 IGYHFLVGQDGGVYE 76 (163)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456799999999864
No 303
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=26.77 E-value=10 Score=19.59 Aligned_cols=15 Identities=13% Similarity=0.200 Sum_probs=11.9
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
-+.+++|++|+|.+.
T Consensus 26 ~~i~~~d~~g~i~~~ 40 (118)
T 2w0n_A 26 EGVVAVDDRGEVTLI 40 (118)
T ss_dssp CCCEEEBTTTBCCCB
T ss_pred ccEEEECCCCcEeeh
Confidence 457899999998754
No 304
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=26.47 E-value=38 Score=20.06 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=22.2
Q ss_pred chHHHHHcCCccccccCCcccCccceeEEEECCCCcEEEE
Q psy13814 24 NRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKLS 63 (75)
Q Consensus 24 ~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~~ 63 (75)
+..+...++.+.+...+ -..=+.+++|++|+|.+.
T Consensus 8 ~~~l~~~l~~l~~~~ld-----~l~~Gii~lD~~g~I~~~ 42 (125)
T 1nwz_A 8 SEDIENTLAKMDDGQLD-----GLAFGAIQLDGDGNILQY 42 (125)
T ss_dssp CTTHHHHTTTCCHHHHT-----TCSSEEEEEETTCBEEEE
T ss_pred cHhHHHHHHHhHHHHHh-----ccCceEEEECCCCEEEEE
Confidence 34566777766432221 133478999999999864
No 305
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=26.41 E-value=1.3e+02 Score=20.19 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=20.3
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..+.=|+++++|.+....+||..
T Consensus 257 ~~~ve~~~~~dg~~~viEiNpR~ 279 (389)
T 3q2o_A 257 TLAVEMFATADGEIYINELAPRP 279 (389)
T ss_dssp EEEEEEEECTTSCEEEEEEESSC
T ss_pred EEEEEEEEeCCCCEEEEEeeCCC
Confidence 66778999999999999999985
No 306
>2yh9_A Small protein A, BAME protein; lipoprotein, 3D domain SWAP, membrane protein; 1.80A {Escherichia coli}
Probab=26.25 E-value=72 Score=17.31 Aligned_cols=25 Identities=16% Similarity=0.050 Sum_probs=15.8
Q ss_pred ceeEEEECCCCcEEEEEEcCCCCCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPASTGR 72 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~~~GR 72 (75)
..-++.+|.+|++..+..+...-|+
T Consensus 56 ~~l~V~Fd~~g~V~~~~~~~~~~~~ 80 (88)
T 2yh9_A 56 QTLTLTFNSSGVLTNIDNKPALSGN 80 (88)
T ss_dssp CEEEEEECTTSBEEEEEEEC-----
T ss_pred EEEEEEEcCCCeEEEEEcccCCccc
Confidence 3445557999999999988877664
No 307
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=25.91 E-value=51 Score=20.98 Aligned_cols=16 Identities=13% Similarity=0.015 Sum_probs=12.7
Q ss_pred eeEEEECCCCcEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSI 64 (75)
Q Consensus 49 R~tFiId~dG~I~~~~ 64 (75)
=.++||||+|.|....
T Consensus 215 G~S~ii~p~G~v~~~~ 230 (266)
T 2e11_A 215 GDSAVIDFLGQPQVEI 230 (266)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred eeEEEECCCCceeeec
Confidence 3588999999987654
No 308
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=25.40 E-value=1.3e+02 Score=20.58 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=20.8
Q ss_pred ccceeEEEECCCCcEEEEEEcCCC
Q psy13814 46 ITVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 46 ~~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
...|.=|++|++|.+....+||.+
T Consensus 318 G~~~vDf~~~~~g~~~vlEINtrP 341 (383)
T 3k3p_A 318 GLSRCDFFLTEDGKVYLNELNTMP 341 (383)
T ss_dssp EEEEEEEEECTTCCEEEEEEESSC
T ss_pred eEEEEEEEEECCCCEEEEEeeCCC
Confidence 367899999999999999999865
No 309
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=25.33 E-value=39 Score=20.60 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=22.4
Q ss_pred Ccee-EEecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 15 FPFA-IIGDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 15 l~fp-LlsD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
+.|- +=+|.+.+++++||+. ..+++++++ +|.+.
T Consensus 68 ~~~~~vd~~~~~~l~~~~~v~------------~~Pt~~~~~-~g~~~ 102 (241)
T 3idv_A 68 IPVAKIDATSASVLASRFDVS------------GYPTIKILK-KGQAV 102 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCC------------SSSEEEEEE-TTEEE
T ss_pred eEEEEEeccCCHHHHHhcCCC------------cCCEEEEEc-CCCcc
Confidence 5543 3357889999999984 235677775 56544
No 310
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=25.31 E-value=1.5e+02 Score=19.95 Aligned_cols=24 Identities=8% Similarity=0.065 Sum_probs=21.1
Q ss_pred cceeEEEECCCCcEEEEEEcCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAST 70 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~ 70 (75)
..|.=|+++++|.+....+||.+-
T Consensus 299 ~~~vD~~~~~~g~~~vlEiN~rpg 322 (377)
T 1ehi_A 299 EARMDFLLDENNVPYLGEPNTLPG 322 (377)
T ss_dssp EEEEEEEECTTCCEEEEEEESSCC
T ss_pred EEEEEEEEeCCCCEEEEEEeCCCC
Confidence 678889999999999999999754
No 311
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=25.05 E-value=33 Score=20.48 Aligned_cols=15 Identities=27% Similarity=0.333 Sum_probs=11.8
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|..
T Consensus 40 isyHflI~~dG~I~q 54 (146)
T 1lba_A 40 VGYHFIIKRDGTVEA 54 (146)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456799999999753
No 312
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=24.30 E-value=45 Score=18.30 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=11.9
Q ss_pred eeEEEEC-CCCcEEEE
Q psy13814 49 RAVYIIG-PDRKLKLS 63 (75)
Q Consensus 49 R~tFiId-~dG~I~~~ 63 (75)
=+.+++| ++|+|.++
T Consensus 28 ~~i~~~d~~~~~i~~~ 43 (158)
T 3k3c_A 28 AILVGLEGPDHRFVAV 43 (158)
T ss_dssp SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCcEeHHH
Confidence 3678898 99988765
No 313
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=24.01 E-value=45 Score=19.96 Aligned_cols=16 Identities=0% Similarity=-0.145 Sum_probs=13.2
Q ss_pred ceeEEEECCCCcEEEE
Q psy13814 48 VRAVYIIGPDRKLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~ 63 (75)
.=+.+++|++|+|.+.
T Consensus 32 ~~GiivlD~dg~I~~~ 47 (129)
T 1mzu_A 32 PVGAIQVDGSGVIHRY 47 (129)
T ss_dssp SSEEEEEETTCBEEEE
T ss_pred CceEEEECCCCeEEEE
Confidence 3478999999999864
No 314
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=23.85 E-value=67 Score=17.33 Aligned_cols=15 Identities=7% Similarity=0.162 Sum_probs=12.2
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
-+.+++|++|.|.+.
T Consensus 51 ~~i~~~d~~g~i~~~ 65 (167)
T 1v9y_A 51 MGAVLINENDEVMFF 65 (167)
T ss_dssp SEEEEECTTSBEEEE
T ss_pred CCEEEECCCCcEEEE
Confidence 467899999998765
No 315
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=23.81 E-value=1.5e+02 Score=19.83 Aligned_cols=23 Identities=9% Similarity=0.170 Sum_probs=19.9
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|+++++|.+....+|+.+
T Consensus 298 ~~~vD~~~~~~g~~~vlEiN~~P 320 (364)
T 3i12_A 298 MARVDVFLTADNEVVINEINTLP 320 (364)
T ss_dssp EEEEEEEECTTCCEEEEEEESSC
T ss_pred EEEEEEEEecCCCEEEEEeeCCC
Confidence 67888999999999999999654
No 316
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=23.68 E-value=35 Score=20.91 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=12.2
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 65 igyhflI~~dG~I~~ 79 (169)
T 2rkq_A 65 IGYHYLIGGNGKVYE 79 (169)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCCcEEECCCCEEEE
Confidence 456799999999864
No 317
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=23.56 E-value=36 Score=21.13 Aligned_cols=15 Identities=13% Similarity=0.476 Sum_probs=12.1
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 71 igyhflI~~dG~I~e 85 (180)
T 2xz4_A 71 IGYNFLVGGDGQIYV 85 (180)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456799999999864
No 318
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=23.42 E-value=66 Score=16.60 Aligned_cols=15 Identities=20% Similarity=0.450 Sum_probs=12.0
Q ss_pred eeEEEECC---CCcEEEE
Q psy13814 49 RAVYIIGP---DRKLKLS 63 (75)
Q Consensus 49 R~tFiId~---dG~I~~~ 63 (75)
=+.+++|+ +|+|.+.
T Consensus 8 ~~i~~~d~~~~~g~i~~~ 25 (128)
T 3t50_A 8 MPMLITNPHLPDNPIVFA 25 (128)
T ss_dssp SCEEEECTTSTTCCEEEE
T ss_pred ccEEEecCCCCCCcEEEE
Confidence 46799999 8898764
No 319
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=23.41 E-value=70 Score=17.06 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=11.8
Q ss_pred ceeEEEECCCC---cEEEE
Q psy13814 48 VRAVYIIGPDR---KLKLS 63 (75)
Q Consensus 48 ~R~tFiId~dG---~I~~~ 63 (75)
.=+.+++|++| +|.++
T Consensus 9 ~~~i~~~d~~g~~~~i~~~ 27 (132)
T 2pr5_A 9 RVGVVITDPALEDNPIVYV 27 (132)
T ss_dssp CCEEEEECTTSTTCCEEEE
T ss_pred CCcEEEEeCCCCCCcEEEE
Confidence 34678999976 88764
No 320
>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10
Probab=23.24 E-value=1.1e+02 Score=19.97 Aligned_cols=20 Identities=10% Similarity=-0.011 Sum_probs=16.7
Q ss_pred eeEEEECCCCcEEEEEEcCC
Q psy13814 49 RAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 49 R~tFiId~dG~I~~~~~~~~ 68 (75)
|..++.||||.....+....
T Consensus 139 ~~~~f~DPdG~~iel~~~~~ 158 (338)
T 1zsw_A 139 PALQFEDAEGLRLVLLVSNG 158 (338)
T ss_dssp EEEEEECTTCCEEEEEECTT
T ss_pred EEEEEECCCCCEEEEEEcCC
Confidence 88999999999888776653
No 321
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=23.16 E-value=37 Score=20.82 Aligned_cols=11 Identities=9% Similarity=0.326 Sum_probs=9.5
Q ss_pred EEEECCCCcEE
Q psy13814 51 VYIIGPDRKLK 61 (75)
Q Consensus 51 tFiId~dG~I~ 61 (75)
-|+|+.||.|-
T Consensus 73 nFlI~~dG~Vy 83 (150)
T 2xz8_A 73 NFVAAGDENIY 83 (150)
T ss_dssp SEEECTTSCEE
T ss_pred cEEEcCCCeEE
Confidence 59999999874
No 322
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=23.07 E-value=37 Score=21.45 Aligned_cols=14 Identities=14% Similarity=0.240 Sum_probs=11.1
Q ss_pred eeEEEECCCCcEEE
Q psy13814 49 RAVYIIGPDRKLKL 62 (75)
Q Consensus 49 R~tFiId~dG~I~~ 62 (75)
=--|+|++||.|-.
T Consensus 79 GYhflI~~dG~Iye 92 (176)
T 3ep1_A 79 KYNFLIDQDGVIYE 92 (176)
T ss_dssp SCSEEECTTSCEEE
T ss_pred CccEEEcCCCEEEE
Confidence 34699999999863
No 323
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=23.07 E-value=37 Score=20.98 Aligned_cols=15 Identities=13% Similarity=0.335 Sum_probs=12.2
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 68 igyhflI~~dG~I~e 82 (175)
T 2cb3_A 68 IAYNFLVGCDGNIYE 82 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456799999999864
No 324
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=23.04 E-value=1.5e+02 Score=19.55 Aligned_cols=23 Identities=22% Similarity=0.164 Sum_probs=20.1
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|.=|+++++|.+....+|+.+
T Consensus 288 ~~~vD~~~~~~g~~~vlEiN~rP 310 (346)
T 3se7_A 288 LSRVDLFLTEDGKVVLNEVNTFP 310 (346)
T ss_dssp EEEEEEEECTTSCEEEEEEESSC
T ss_pred EEEEEEEEeCCCCEEEEEEeCCC
Confidence 67888999999999999999764
No 325
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=22.81 E-value=77 Score=20.38 Aligned_cols=18 Identities=22% Similarity=0.097 Sum_probs=13.5
Q ss_pred cceeEEEECCCCcEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~ 64 (75)
..-+.++|+|+|.|...+
T Consensus 109 ~yNs~~~i~~~G~i~~~y 126 (291)
T 1f89_A 109 IYNTSIIFNEDGKLIDKH 126 (291)
T ss_dssp EEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEECCCCcEEeEE
Confidence 456789999999875543
No 326
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=22.67 E-value=38 Score=20.96 Aligned_cols=15 Identities=27% Similarity=0.324 Sum_probs=12.1
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 72 igyhflI~~dG~I~e 86 (175)
T 1yck_A 72 VGYNFLIGEDGLVYE 86 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456799999999864
No 327
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=22.55 E-value=1.1e+02 Score=17.97 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=15.7
Q ss_pred cceeEEEECCCCcEEEEEEc
Q psy13814 47 TVRAVYIIGPDRKLKLSIVY 66 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~ 66 (75)
...-.|-|++||.|..+.+-
T Consensus 53 ~~~V~v~l~~dG~v~~v~v~ 72 (129)
T 1lr0_A 53 SVEVLIEMLPDGTITNASVS 72 (129)
T ss_dssp CEEEEEEECTTSBEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEe
Confidence 45667889999999887653
No 328
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=22.41 E-value=79 Score=20.46 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=21.5
Q ss_pred hHHHHHcCCcccccc-CCcccCccceeEEEECCCCcEEEEE
Q psy13814 25 RDLAVKLDLLDEENK-NNLETAITVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 25 ~~i~~~yGv~~~~~~-~~~~~~~~~R~tFiId~dG~I~~~~ 64 (75)
.++|+.+|+.---.. ....-....=+.++|+|+|.|...+
T Consensus 88 ~~la~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y 128 (281)
T 3p8k_A 88 KHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEY 128 (281)
T ss_dssp HHHHHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEE
T ss_pred HHHHhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEE
Confidence 357788886421000 0000012345789999999986543
No 329
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=22.34 E-value=12 Score=20.57 Aligned_cols=10 Identities=30% Similarity=0.544 Sum_probs=8.1
Q ss_pred cceeEEEECC
Q psy13814 47 TVRAVYIIGP 56 (75)
Q Consensus 47 ~~R~tFiId~ 56 (75)
-.|.|||||.
T Consensus 45 ksrgtFvId~ 54 (75)
T 2kxe_A 45 KSRETFIIDD 54 (75)
T ss_dssp HHHTCSEECH
T ss_pred HhcCcEEech
Confidence 4699999984
No 330
>1sxr_A Peptidoglycan recognition protein SA CG11709-PA; pattern recognition receptor, innate immunity pathway, immune system; 1.56A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=22.29 E-value=40 Score=21.11 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=12.0
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 74 IgyhflI~~dG~I~e 88 (183)
T 1sxr_A 74 ISYNFLIGNDGIVYE 88 (183)
T ss_dssp CSSSEEECTTCCEEE
T ss_pred CCceEEECCCCEEEE
Confidence 456799999999863
No 331
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=22.27 E-value=81 Score=20.15 Aligned_cols=18 Identities=22% Similarity=0.377 Sum_probs=13.2
Q ss_pred cceeEEEECCCCcEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~ 64 (75)
..=+.++|+|+|.|...+
T Consensus 93 ~yNs~~~i~~~G~i~~~y 110 (276)
T 2w1v_A 93 LYNTCSVFGPDGSLLVKH 110 (276)
T ss_dssp EEEEEEEECTTSCEEEEE
T ss_pred EEEEEEEECCCCcEEEEE
Confidence 345788999999885443
No 332
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=22.17 E-value=81 Score=20.33 Aligned_cols=17 Identities=6% Similarity=0.071 Sum_probs=12.7
Q ss_pred ceeEEEECCCCcEEEEE
Q psy13814 48 VRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~ 64 (75)
.=+.++|+|+|.|...+
T Consensus 108 yNs~~~i~~~G~i~~~y 124 (303)
T 1uf5_A 108 FNTSILVDKSGKIVGKY 124 (303)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred eeEEEEECCCCCEeeeE
Confidence 45678999999876544
No 333
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=21.96 E-value=40 Score=20.68 Aligned_cols=15 Identities=13% Similarity=0.379 Sum_probs=11.9
Q ss_pred ceeEEEECCCCcEEE
Q psy13814 48 VRAVYIIGPDRKLKL 62 (75)
Q Consensus 48 ~R~tFiId~dG~I~~ 62 (75)
.-.-|+|+.||.|-.
T Consensus 64 igyhflI~~dG~I~e 78 (167)
T 2f2l_X 64 IGYNFLVGGDGRVYE 78 (167)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 456899999999753
No 334
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=21.82 E-value=76 Score=17.63 Aligned_cols=19 Identities=11% Similarity=0.156 Sum_probs=14.0
Q ss_pred ceeE-EEECCCCcEEEEEEc
Q psy13814 48 VRAV-YIIGPDRKLKLSIVY 66 (75)
Q Consensus 48 ~R~t-FiId~dG~I~~~~~~ 66 (75)
.|.. |+.||+|........
T Consensus 108 ~~~~~~~~DPdG~~iel~~~ 127 (144)
T 2c21_A 108 SGFMAFVVDPDGYYIELLNE 127 (144)
T ss_dssp SSSEEEEECTTSCEEEEEEH
T ss_pred cEEEEEEECCCCCEEEEEEc
Confidence 3554 899999998776654
No 335
>3lic_A Sensor protein; PDC fold, ATP-binding, kinase, nucleotide-binding, phosphopr transferase, transmembrane; 2.30A {Shewanella oneidensis}
Probab=21.73 E-value=57 Score=20.16 Aligned_cols=14 Identities=7% Similarity=0.280 Sum_probs=11.6
Q ss_pred eEEEECCCCcEEEE
Q psy13814 50 AVYIIGPDRKLKLS 63 (75)
Q Consensus 50 ~tFiId~dG~I~~~ 63 (75)
.+||+|.+|+|...
T Consensus 182 ~~~l~d~~G~ii~~ 195 (274)
T 3lic_A 182 RLVVLDDQGRLIFH 195 (274)
T ss_dssp GEEEECTTSCEEEC
T ss_pred eEEEECCCCCEEEe
Confidence 58999999998753
No 336
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=21.70 E-value=46 Score=19.82 Aligned_cols=15 Identities=20% Similarity=0.253 Sum_probs=12.0
Q ss_pred eeEEEECCCCcEEEE
Q psy13814 49 RAVYIIGPDRKLKLS 63 (75)
Q Consensus 49 R~tFiId~dG~I~~~ 63 (75)
-.+||+|++|.|...
T Consensus 160 g~~~l~d~~G~ii~~ 174 (240)
T 3c8c_A 160 GYVFIVSEDGTTIAH 174 (240)
T ss_dssp EEEEEEETTSBEEEC
T ss_pred eEEEEEcCCCcEEEe
Confidence 358999999998763
No 337
>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*
Probab=21.63 E-value=1.5e+02 Score=18.69 Aligned_cols=22 Identities=5% Similarity=-0.210 Sum_probs=17.5
Q ss_pred cceeEEEECCCCcEEEEEEcCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~ 68 (75)
..|..++.||+|.....+..+.
T Consensus 99 ~~~~~~~~DPdG~~iel~~~~~ 120 (297)
T 1lgt_A 99 VTGLITFADPFGLPLEIYYGAS 120 (297)
T ss_dssp CSEEEEEECTTSCEEEEEECCC
T ss_pred ceeEEEEECCCCCEEEEEECcc
Confidence 3588899999999887776653
No 338
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=21.51 E-value=94 Score=19.62 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=21.6
Q ss_pred CCceeEE-ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 14 DFPFAII-GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 14 ~l~fpLl-sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
++.|..+ .+.+..++++||+. ..+++|+ +|++.
T Consensus 174 ~v~~~~vd~~~~~~~~~~~~V~------------~vPt~~i---~G~~~ 207 (243)
T 2hls_A 174 VILSEAVEAYENPDIADKYGVM------------SVPSIAI---NGYLV 207 (243)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC------------SSSEEEE---TTEEE
T ss_pred cEEEEEEECccCHHHHHHcCCe------------eeCeEEE---CCEEE
Confidence 4555444 34567899999984 3456666 68765
No 339
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=21.43 E-value=25 Score=19.27 Aligned_cols=29 Identities=17% Similarity=0.189 Sum_probs=19.3
Q ss_pred ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEEE
Q psy13814 21 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLKL 62 (75)
Q Consensus 21 sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~~ 62 (75)
.|.+.+++++||+.. +| ||++.++|++..
T Consensus 75 ~~~~~~~~~~~~v~~----------~P---t~~~~~~g~~~~ 103 (130)
T 1wmj_A 75 VDELKEVAEKYNVEA----------MP---TFLFIKDGAEAD 103 (130)
T ss_dssp TTTSGGGHHHHTCCS----------SC---CCCBCTTTTCCB
T ss_pred ccchHHHHHHcCCCc----------cc---eEEEEeCCeEEE
Confidence 366778999998741 23 455658888754
No 340
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=21.38 E-value=98 Score=17.09 Aligned_cols=19 Identities=11% Similarity=-0.034 Sum_probs=13.8
Q ss_pred eEEEECCCCcEEEEEEcCC
Q psy13814 50 AVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 50 ~tFiId~dG~I~~~~~~~~ 68 (75)
.+|-++.+|+|.....|-.
T Consensus 111 ~~~~~~~dGkI~~~~~y~d 129 (139)
T 2a15_A 111 FTYRVNKAGLITNMRGYWN 129 (139)
T ss_dssp EEEEECTTSCEEEEEEECC
T ss_pred EEEEECCCCeEEEeehhcC
Confidence 4555678999998876654
No 341
>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*
Probab=21.32 E-value=1.1e+02 Score=19.38 Aligned_cols=21 Identities=10% Similarity=-0.156 Sum_probs=16.9
Q ss_pred ceeEEEECCCCcEEEEEEcCC
Q psy13814 48 VRAVYIIGPDRKLKLSIVYPA 68 (75)
Q Consensus 48 ~R~tFiId~dG~I~~~~~~~~ 68 (75)
.|..|+-||+|..........
T Consensus 252 ~~~~~~~DPdG~~iEl~~~~~ 272 (300)
T 2zyq_A 252 MLSFYMKTPGGFDIEFGCEGR 272 (300)
T ss_dssp CEEEEEECTTSSEEEEEECCC
T ss_pred eEEEEEECCCCCEEEEEeCCe
Confidence 577899999999887776543
No 342
>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*
Probab=21.13 E-value=90 Score=19.98 Aligned_cols=23 Identities=17% Similarity=-0.055 Sum_probs=18.5
Q ss_pred cceeEEEECCCCcEEEEEEcCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPAS 69 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~ 69 (75)
..|+.++-||+|.....+..+..
T Consensus 104 ~~~~~~f~DPdG~~iel~~~~~~ 126 (309)
T 3hpy_A 104 TGERVRFELPSGHLIELYAEKTC 126 (309)
T ss_dssp BCCEEEEECTTSCEEEEESCBCB
T ss_pred CeeEEEEECCCCCEEEEEEccce
Confidence 46889999999998888766543
No 343
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=20.85 E-value=40 Score=17.85 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=18.9
Q ss_pred ecCchHHHHHcCCccccccCCcccCccceeEEEECCCCcEE
Q psy13814 21 GDENRDLAVKLDLLDEENKNNLETAITVRAVYIIGPDRKLK 61 (75)
Q Consensus 21 sD~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~dG~I~ 61 (75)
.+.+.+++++||+. ..++++++ ++|++.
T Consensus 67 ~~~~~~~~~~~~v~------------~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 67 ATEESDLAQQYGVR------------GYPTIKFF-RNGDTA 94 (120)
T ss_dssp TTTCCSSHHHHTCC------------SSSEEEEE-ESSCSS
T ss_pred CCCCHHHHHHCCCC------------cccEEEEE-eCCCcC
Confidence 34567889999873 34677777 577643
No 344
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=20.72 E-value=77 Score=18.43 Aligned_cols=17 Identities=12% Similarity=-0.031 Sum_probs=12.3
Q ss_pred EEEECCCCcEEEEEEcC
Q psy13814 51 VYIIGPDRKLKLSIVYP 67 (75)
Q Consensus 51 tFiId~dG~I~~~~~~~ 67 (75)
+|-+|.||+|.....+-
T Consensus 101 v~~~~~dGkI~~~~~~~ 117 (143)
T 3mso_A 101 MIRFDDDGRIVDFEVMV 117 (143)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EEEECCCCcEEEEEEEE
Confidence 45568899998876553
No 345
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=20.57 E-value=1.2e+02 Score=16.96 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=26.7
Q ss_pred hhhhcCCCCCCceeEEe-cCchHHHHHcCCccccccCCcccCccceeEEEECC-CCcE
Q psy13814 5 KNYCLDIKGDFPFAIIG-DENRDLAVKLDLLDEENKNNLETAITVRAVYIIGP-DRKL 60 (75)
Q Consensus 5 ~~~~~~~k~~l~fpLls-D~~~~i~~~yGv~~~~~~~~~~~~~~~R~tFiId~-dG~I 60 (75)
++++.+.+.++.|-.+- |.+..++..||+..+ ..++..+++. +|+.
T Consensus 45 ~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~----------~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 45 KPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTD----------KFPAFAIQEVAKNQK 92 (133)
T ss_dssp HHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSS----------SSSEEEEECTTTCCB
T ss_pred HHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcc----------cCCEEEEEecCcCcc
Confidence 33444444567775543 566778888988532 1356666653 4654
No 346
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=20.55 E-value=71 Score=21.66 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=13.1
Q ss_pred eEEEECCCCcEEEEE
Q psy13814 50 AVYIIGPDRKLKLSI 64 (75)
Q Consensus 50 ~tFiId~dG~I~~~~ 64 (75)
+.+++|.+|+|++.-
T Consensus 251 gIivvD~~g~I~~~N 265 (369)
T 3cax_A 251 DVTFIDKDDRVRFFS 265 (369)
T ss_dssp EEEEECTTSBEEEEC
T ss_pred cEEEECCCCcEEEEc
Confidence 789999999998773
No 347
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=20.36 E-value=1.5e+02 Score=19.62 Aligned_cols=25 Identities=4% Similarity=0.107 Sum_probs=21.0
Q ss_pred cceeEEEECCCCcEEEEEEcCCCCC
Q psy13814 47 TVRAVYIIGPDRKLKLSIVYPASTG 71 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~~~~~~~G 71 (75)
..+.=|+++++|.+....+||..-+
T Consensus 240 ~~~vd~~~~~~g~~~viEiN~R~~~ 264 (380)
T 3ax6_A 240 IFGIEMFLTKQGEILVNEIAPRPHN 264 (380)
T ss_dssp EEEEEEEEETTSCEEEEEEESSCCG
T ss_pred EEEEEEEEeCCCcEEEEEecCCCCC
Confidence 6678899999999999999997543
No 348
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=20.29 E-value=90 Score=20.85 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=13.8
Q ss_pred cceeEEEECCCCcEEEEE
Q psy13814 47 TVRAVYIIGPDRKLKLSI 64 (75)
Q Consensus 47 ~~R~tFiId~dG~I~~~~ 64 (75)
..=+.++|+|+|.|...+
T Consensus 114 ~yNsa~vi~p~G~i~~~Y 131 (334)
T 2dyu_A 114 PYNTAIIIDPQGEIILKY 131 (334)
T ss_dssp CEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEECCCCCEEEEE
Confidence 446789999999886554
No 349
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=20.06 E-value=58 Score=19.58 Aligned_cols=16 Identities=13% Similarity=0.241 Sum_probs=12.4
Q ss_pred eeEEEECCCCcEEEEE
Q psy13814 49 RAVYIIGPDRKLKLSI 64 (75)
Q Consensus 49 R~tFiId~dG~I~~~~ 64 (75)
-..||+|.+|+|....
T Consensus 163 g~~~l~d~~G~ii~~~ 178 (217)
T 4dah_A 163 VYIEVVNQDGKMIFAS 178 (217)
T ss_dssp SCEEEEETTSCEEEEE
T ss_pred cEEEEEcCCCCEEEeC
Confidence 3689999999876553
Done!