RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13815
(388 letters)
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 257 bits (658), Expect = 3e-84
Identities = 84/303 (27%), Positives = 129/303 (42%), Gaps = 62/303 (20%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG-----HFCGGTIIHEQWIVTAAHCL 159
CG + + + I+ G P EFPW + CGG++I+ ++IVTAAHC+
Sbjct: 14 CGYQVEADK---ILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV 70
Query: 160 CNGPSPLSASQINVTLKEHDLSR-------------PSISTVPVLRIMFHPSHSCSSFN- 205
+ + V L E + + + + + HP + S +
Sbjct: 71 AGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDR 130
Query: 206 -NDIALLELTRSIQWSDLIRPACLP-SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQK 263
+DIAL+ L R +++++ IRP CLP Q +TV GWG T G+ S I QK
Sbjct: 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT----ETGQYSTIKQK 186
Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
+A+ VV + C + + G ++ SQ+CAG E KD+C
Sbjct: 187 LAVPVVHAEQCAKTFGAAGVRVR--SSQLCAGGE-KAKDSC------------------- 224
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAEST-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
DSGGPL+ A + GLVS G C PG+YT++ +Y WI
Sbjct: 225 -----------GGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIE 273
Query: 383 DTL 385
+
Sbjct: 274 GNI 276
Score = 88.9 bits (221), Expect = 3e-20
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
+ S I QK+A+ VV + C + + G ++ SQ+CAG E KD+C DSGGPL+
Sbjct: 179 QYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR--SSQLCAGGE-KAKDSCGGDSGGPLLAE 235
Query: 61 GAEST-QVIGLVSTGIG 76
A + GLVS G
Sbjct: 236 RANQQFFLEGLVSFGAT 252
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 256 bits (655), Expect = 3e-84
Identities = 78/275 (28%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG GE PW V L +G CGGT+I+ W+V+AAHC + + L
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNW---RNLIAVLG 57
Query: 177 EHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
EHDLS V +++ ++ + N+DIALL L + + +D + P CLP +
Sbjct: 58 EHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFS 117
Query: 235 YSE----QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+ V+GWG + G + L + + + Q C + G N+ E
Sbjct: 118 ERTLAFVRFSLVSGWGQLLDR---GATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEY 174
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
CAG+ G KD+C + DSGGP +
Sbjct: 175 MFCAGYSDGSKDSC------------------------------KGDSGGPHATHYRGTW 204
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ G+VS G GCA G+YTR+++YI W+ +
Sbjct: 205 YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLM 239
Score = 79.6 bits (197), Expect = 3e-17
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ L + + + Q C + G N+ E CAG+ G KD+C DSGGP
Sbjct: 142 ALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYR 201
Query: 63 ESTQVIGLVSTGIG 76
+ + G+VS G G
Sbjct: 202 GTWYLTGIVSWGQG 215
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 252 bits (646), Expect = 4e-83
Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 43/273 (15%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG A G +PW+V L CG +++ W+V+AAHC+ L S+ L
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCV--YGRNLEPSKWTAILG 58
Query: 177 EHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
H S P + I+ +P ++ +NDIA++ L + ++D I+P LP +
Sbjct: 59 LHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQ 118
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
+ ++ ++AGWG G ++ILQ+ + ++SN+ CQ N+ E+ +
Sbjct: 119 VFPPGRNCSIAGWGTVVYQ---GTTADILQEADVPLLSNERCQQQMPEY----NITENMI 171
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
CAG+E+GG D+C Q DSGGPLM +
Sbjct: 172 CAGYEEGGIDSC------------------------------QGDSGGPLMCQENNRWFL 201
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+ S G CA P PG+Y R++R+ WI L
Sbjct: 202 AGVTSFGYECALPNRPGVYARVSRFTEWIQSFL 234
Score = 77.6 bits (192), Expect = 1e-16
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ILQ+ + ++SN+ CQ N+ E+ +CAG+E+GG D+C DSGGPLM
Sbjct: 141 ADILQEADVPLLSNERCQQQMPEY----NITENMICAGYEEGGIDSCQGDSGGPLMCQEN 196
Query: 63 ESTQVIGLVSTGIG 76
+ G+ S G
Sbjct: 197 NRWFLAGVTSFGYE 210
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 255 bits (653), Expect = 4e-82
Identities = 78/299 (26%), Positives = 120/299 (40%), Gaps = 52/299 (17%)
Query: 105 CGRSLASRRTGKIVGGL-AANPGEFPWIVSLKRHG--------GHFCGGTIIHEQWIVTA 155
CG KI G A GEFPW+V++ + CGG++I ++T
Sbjct: 118 CGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTG 177
Query: 156 AHCLCNGPSPLSASQINVTLKEHDLSRPSIS----TVPVLRIMFHPSHSCSSFNNDIALL 211
AHC+ + S + I + E D + +++ H + + + ND+ALL
Sbjct: 178 AHCVNSYQS--NLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALL 235
Query: 212 ELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSN 271
L R + +D I CLP S + +GWG S+ R SNIL+K+ L V
Sbjct: 236 LLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG-SRHRYSNILKKIQLPTVDR 294
Query: 272 QVCQAWYQS--EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
CQA ++ G K + ++ +CAG E GKD C
Sbjct: 295 DKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTC------------------------- 328
Query: 330 WDPPLQADSGGPLMLLGAEST---QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
D G PL + +G+V+ GIGC +PG+Y + + WI +
Sbjct: 329 -----TGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEM 382
Score = 83.3 bits (206), Expect = 8e-18
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 3 SNILQKVALSVVSNQVCQAWYQS--EGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
SNIL+K+ L V CQA ++ G K + ++ +CAG E GKD C D G PL
Sbjct: 281 SNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGE-QGKDTCTGDGGSPLFCP 339
Query: 61 GAEST---QVIGLVSTGIG 76
+ +G+V+ GIG
Sbjct: 340 DPRNPSRYMQMGIVAWGIG 358
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 249 bits (639), Expect = 4e-82
Identities = 90/271 (33%), Positives = 137/271 (50%), Gaps = 45/271 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKR----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
IVGG A GEFP+ +S + HFCG +I +E + +TA HC G + S +
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHC-VYGDDYENPSGLQ 59
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
+ E D+S S + V +I+ H + + +NDI+LL+L+ S+ ++D + P LP
Sbjct: 60 IVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPE 119
Query: 231 GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+ V V GWG T+E G ++LQKV + +VS++ C+A Y ++ + +S
Sbjct: 120 QG-HTATGDVIVTGWGTTSEG---GNTPDVLQKVTVPLVSDEDCRADYGAD----EILDS 171
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+CAG +GGKD+C Q DSGGPL ST
Sbjct: 172 MICAGVPEGGKDSC------------------------------QGDSGGPLAASDTGST 201
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
+ G+VS G GCARP PG+YT ++ ++ WI
Sbjct: 202 YLAGIVSWGYGCARPGYPGVYTEVSYHVDWI 232
Score = 77.6 bits (192), Expect = 1e-16
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++LQKV + +VS++ C+A Y ++ + +S +CAG +GGKD+C DSGGPL
Sbjct: 143 PDVLQKVTVPLVSDEDCRADYGAD----EILDSMICAGVPEGGKDSCQGDSGGPLAASDT 198
Query: 63 ESTQVIGLVSTGIG 76
ST + G+VS G G
Sbjct: 199 GSTYLAGIVSWGYG 212
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 252 bits (646), Expect = 8e-82
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 104 PCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNG 162
CG+ + + +I+GG A G FPW V H GG ++ ++WI+TAAH L
Sbjct: 76 VCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPK 133
Query: 163 PSP-LSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSHSCS---SFNNDIALLELTRSI 217
S + ++V L ++ + P+ R+ HP + +F DIALLEL S+
Sbjct: 134 EHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSV 193
Query: 218 QWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQA 276
+ P CLP Y V+G+G E + + L+ V L V + Q C+
Sbjct: 194 TLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIA-----HDLRFVRLPVANPQACEN 248
Query: 277 WYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQA 336
W + + + ++ CAGH +DAC Q
Sbjct: 249 WLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------------------QG 278
Query: 337 DSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
DSGG + + + G+VS GIGC+R G YT++ Y+ WI ++
Sbjct: 279 DSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEME 328
Score = 85.2 bits (211), Expect = 1e-18
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ L+ V L V + Q C+ W + + + ++ CAGH +DAC DSGG +
Sbjct: 230 AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDP 289
Query: 63 ESTQ--VIGLVSTGIG 76
+ + G+VS GIG
Sbjct: 290 NTDRWVATGIVSWGIG 305
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 254 bits (651), Expect = 1e-81
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 47/305 (15%)
Query: 89 TLDLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIH 148
+ S P+ CG S A G+I GG A PG+FPW V + GG G +++
Sbjct: 135 WTSSKGEKSLPVCEPVCGLS-ARTTGGQIYGGQKAKPGDFPWQVLI--LGGTTAAGALLY 191
Query: 149 EQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSC-SSFNND 207
+ W++TAAH + AS +++ + P + + H ++ + F+ND
Sbjct: 192 DNWVLTAAHAV--YEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDND 249
Query: 208 IALLELTRSIQWSDLIRPACLPSGSLDY---SEQSVTVAGWGWTNENPSQGRRSNILQKV 264
IAL++L + + I P CLP + ++ T +GWG T G + L V
Sbjct: 250 IALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQR----GFLARNLMYV 305
Query: 265 ALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
+ +V +Q C A Y+ + +V + +CAG E GGKD+C
Sbjct: 306 DIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC------------------- 346
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTG-IGCARPRLPGLYTRLTRYIGW 380
+ DSGG L+ L +E+ + V G+VS G + C G+YT++ YI W
Sbjct: 347 -----------RGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPW 395
Query: 381 ISDTL 385
I + +
Sbjct: 396 IENII 400
Score = 77.5 bits (191), Expect = 7e-16
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQS-EGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
+ L V + +V +Q C A Y+ + +V + +CAG E GGKD+C DSGG L+ L
Sbjct: 299 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLD 358
Query: 62 AESTQ--VIGLVS 72
+E+ + V G+VS
Sbjct: 359 SETERWFVGGIVS 371
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 247 bits (633), Expect = 4e-81
Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 46/277 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I GG A PG+FPW V + GG G ++++ W++TAAH + AS +++ +
Sbjct: 1 IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAV--YEQKHDASALDIRMG 56
Query: 177 EHDLSRPSISTVPVLRIMFHPS-HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
P + + H + F+NDIAL++L + + I P CLP +
Sbjct: 57 TLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAES 116
Query: 236 ---SEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQ 291
++ T +GWG T + L V + +V +Q C A Y+ + +V +
Sbjct: 117 FMRTDDIGTASGWGLTQRGFL----ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANM 172
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
+CAG E GGKD+C + DSGG L+ L +E+ +
Sbjct: 173 LCAGLESGGKDSC------------------------------RGDSGGALVFLDSETER 202
Query: 352 --VIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
V G+VS G + C G+YT++ YI WI + +
Sbjct: 203 WFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239
Score = 76.1 bits (188), Expect = 4e-16
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGK-KINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
+ L V + +V +Q C A Y+ + +V + +CAG E GGKD+C DSGG L+ L
Sbjct: 138 ARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLD 197
Query: 62 AESTQ--VIGLVS 72
+E+ + V G+VS
Sbjct: 198 SETERWFVGGIVS 210
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 252 bits (645), Expect = 6e-81
Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 48/305 (15%)
Query: 91 DLEVGGSSPIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHE 149
+ + G P CG+ + + +I+GG A G FPW V H GG ++ +
Sbjct: 131 NEQKGEKIPRCLPVCGKPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIH--GRGGGALLGD 188
Query: 150 QWIVTAAHCLCNGPSP-LSASQINVTLKEHDLSR-PSISTVPVLRIMFHPSHSCSS---F 204
+WI+TAAH L S + ++V L ++ + P+ R+ HP + F
Sbjct: 189 RWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNF 248
Query: 205 NNDIALLELTRSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQK 263
DIALLEL S+ + P CLP Y V+G+G E + + L+
Sbjct: 249 EGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIA-----HDLRF 303
Query: 264 VALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPS 323
V L V + Q C+ W + + + ++ CAGH +DAC
Sbjct: 304 VRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDAC------------------- 344
Query: 324 HRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWI 381
Q DSGG + + + G+VS GIGC+R G YT++ Y+ WI
Sbjct: 345 -----------QGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRG--YGFYTKVLNYVDWI 391
Query: 382 SDTLD 386
++
Sbjct: 392 KKEME 396
Score = 84.5 bits (209), Expect = 3e-18
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
+ ++ L+ V L V + Q C+ W + + + ++ CAGH +DAC DSGG +
Sbjct: 296 KIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVR 355
Query: 61 GAESTQ--VIGLVSTGIG 76
+ + G+VS GIG
Sbjct: 356 DPNTDRWVATGIVSWGIG 373
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 246 bits (631), Expect = 8e-81
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
+VGG A PG+FPW V L FCGG+I++E+WIVTAAHC+ + +I V
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCV------ETGVKITVVAG 54
Query: 177 EHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
EH++ + V+RI+ H + + +++N+DIALLEL + + + P C+
Sbjct: 55 EHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKE 114
Query: 233 LD---YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
S V+GWG GR + +LQ + + +V C + +
Sbjct: 115 YTNIFLKFGSGYVSGWGRVFHK---GRSALVLQYLRVPLVDRATCLRSTKF-----TITN 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+ CAG +GG+D+C Q DSGGP + +
Sbjct: 167 NMFCAGFHEGGRDSC------------------------------QGDSGGPHVTEVEGT 196
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
+ + G++S G CA G+YT+++RY+ WI +
Sbjct: 197 SFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231
Score = 74.9 bits (185), Expect = 9e-16
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +LQ + + +V C + + + CAG +GG+D+C DSGGP +
Sbjct: 140 ALVLQYLRVPLVDRATCLRSTKF-----TITNNMFCAGFHEGGRDSCQGDSGGPHVTEVE 194
Query: 63 ESTQVIGLVSTGIG 76
++ + G++S G
Sbjct: 195 GTSFLTGIISWGEE 208
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 245 bits (627), Expect = 3e-80
Identities = 89/276 (32%), Positives = 128/276 (46%), Gaps = 46/276 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCL--CNGPSPLSASQINV 173
+VGG A+ GE+PW VSL G H CG ++I W+V+AAHC G +Q
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 174 TLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
L HD S+ P + + RI+ HP + +F+ DIALLEL + ++S ++RP LP
Sbjct: 61 FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPD 120
Query: 231 GSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
S + +++ V GWG T G + ILQK + V++ C+ + +
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYG---GTGALILQKGEIRVINQTTCENLLPQQ-----ITP 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
MC G GG D+C Q DSGGPL + A+
Sbjct: 173 RMMCVGFLSGGVDSC------------------------------QGDSGGPLSSVEADG 202
Query: 350 T-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
G+VS G GCA+ PG+YTRL + WI +
Sbjct: 203 RIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238
Score = 76.5 bits (189), Expect = 3e-16
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ ILQK + V++ C+ + + MC G GG D+C DSGGPL + A
Sbjct: 146 ALILQKGEIRVINQTTCENLLPQQ-----ITPRMMCVGFLSGGVDSCQGDSGGPLSSVEA 200
Query: 63 EST-QVIGLVSTGIG 76
+ G+VS G G
Sbjct: 201 DGRIFQAGVVSWGDG 215
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 245 bits (627), Expect = 3e-80
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 51/276 (18%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
IVGG GE PW L FCGGTI+ E +I+TAAHCL A + V +
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL------YQAKRFKVRV 54
Query: 176 KEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS--- 230
+ + + V ++ H + +++ DIA+L L I + + PACLP
Sbjct: 55 GDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDW 114
Query: 231 -GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
S ++++ V+G+G T+E G +S L+ + + V C+ + +
Sbjct: 115 AESTLMTQKTGIVSGFGRTHEK---GEQSTRLKMLEVPYVDRNSCKLSSSFI-----ITQ 166
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+ CAG++ +DAC Q DSGGP + ++
Sbjct: 167 NMFCAGYDTKQEDAC------------------------------QGDSGGPHVTRFKDT 196
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
V G+VS G GCAR G+YT++T ++ WI ++
Sbjct: 197 YFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232
Score = 75.3 bits (186), Expect = 9e-16
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S L+ + + V C+ + ++ CAG++ +DAC DSGGP +
Sbjct: 140 STRLKMLEVPYVDRNSCKLSSSFI-----ITQNMFCAGYDTKQEDACQGDSGGPHVTRFK 194
Query: 63 ESTQVIGLVSTGIG 76
++ V G+VS G G
Sbjct: 195 DTYFVTGIVSWGEG 208
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 244 bits (625), Expect = 5e-80
Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 43/267 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG GE+PW SL+ G H CG T+I+ W+V+AAHC +P ++ +
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNP---ARWTASFG 57
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
+PS + RI+ H + S + DI+L EL+ + +++ + CLP S ++
Sbjct: 58 VTI--KPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQ 115
Query: 237 E-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
+ V G+G + G N L++ ++++ C + +CAG
Sbjct: 116 PGDVMFVTGFGALKND---GYSQNHLRQAQVTLIDATTCNEPQAYNDA---ITPRMLCAG 169
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIG 354
+G DAC Q DSGGPL+ A + G
Sbjct: 170 SLEGKTDAC------------------------------QGDSGGPLVSSDARDIWYLAG 199
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWI 381
+VS G CA+P PG+YTR+T WI
Sbjct: 200 IVSWGDECAKPNKPGVYTRVTALRDWI 226
Score = 76.1 bits (188), Expect = 4e-16
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N L++ ++++ C + +CAG +G DAC DSGGPL+ A
Sbjct: 135 QNHLRQAQVTLIDATTCNEPQAYNDA---ITPRMLCAGSLEGKTDACQGDSGGPLVSSDA 191
Query: 63 EST-QVIGLVSTGIG 76
+ G+VS G
Sbjct: 192 RDIWYLAGIVSWGDE 206
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 244 bits (624), Expect = 9e-80
Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSP-LSASQINVTL 175
I+GG A G FPW V H GG ++ ++WI+TAAH L S + ++V L
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIH--GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 176 KEHDLSRPS-ISTVPVLRIMFHPSHSCSS---FNNDIALLELTRSIQWSDLIRPACLPSG 231
++ + P+ R+ HP + F DIALLEL S+ + P CLP
Sbjct: 59 GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDN 118
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
Y V+G+G E + + L+ V L V + Q C+ W + + + ++
Sbjct: 119 DTFYDLGLMGYVSGFGVMEEKIA-----HDLRFVRLPVANPQACENWLRGKNRMDVFSQN 173
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
CAGH +DAC Q DSGG + +
Sbjct: 174 MFCAGHPSLKQDAC------------------------------QGDSGGVFAVRDPNTD 203
Query: 351 Q--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
+ G+VS GIGC+R G YT++ Y+ WI ++
Sbjct: 204 RWVATGIVSWGIGCSRG--YGFYTKVLNYVDWIKKEME 239
Score = 83.5 bits (207), Expect = 1e-18
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ L+ V L V + Q C+ W + + + ++ CAGH +DAC DSGG +
Sbjct: 141 AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDP 200
Query: 63 ESTQ--VIGLVSTGIG 76
+ + G+VS GIG
Sbjct: 201 NTDRWVATGIVSWGIG 216
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 243 bits (623), Expect = 1e-79
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 48/276 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRH--GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
IVGG+ A P EFPW VS++R HFCGG+II+++W+V AAHC+ + + +++
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCM----QGEAPALVSLV 56
Query: 175 LKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
+ EHD S T V I + ++ ++ ND+++++ +I + + P C P +
Sbjct: 57 VGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
DY + +GWG N +L+ V L++ +N C A Y S+ + + +
Sbjct: 117 NDYVYRKSQCSGWGTINSGGVCC--PAVLRYVTLNITTNAFCDAVYTSD----TIYDDMI 170
Query: 293 CAGHEQG--GKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
CA G +D+C Q DSGGPL +
Sbjct: 171 CATDNTGMTDRDSC------------------------------QGDSGGPLSVKDGSGI 200
Query: 351 -QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
++G+VS GIGCA PG+Y+R+ + GWI+DT+
Sbjct: 201 FSLVGIVSWGIGCASGY-PGVYSRVGFHAGWITDTI 235
Score = 73.8 bits (182), Expect = 3e-15
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQG--GKDACWADSGGPLMLL 60
+L+ V L++ +N C A Y S+ + + +CA G +D+C DSGGPL +
Sbjct: 140 PAVLRYVTLNITTNAFCDAVYTSD----TIYDDMICATDNTGMTDRDSCQGDSGGPLSVK 195
Query: 61 GAEST-QVIGLVSTGIG 76
++G+VS GIG
Sbjct: 196 DGSGIFSLVGIVSWGIG 212
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 242 bits (621), Expect = 2e-79
Identities = 87/269 (32%), Positives = 125/269 (46%), Gaps = 47/269 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG +A+ G+FP+IVS+ R+GG +CGG++++ ++TAAHC+ + S +
Sbjct: 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSG----YAQSGFQIRAG 56
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
+ I T + + HPS+ S NND+A+L+L+ SI I A L + D
Sbjct: 57 SLSRTSGGI-TSSLSSVRVHPSY--SGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPV 113
Query: 237 E-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG 295
S TVAGWG T+E S L KV + +VS C+A Y + + CAG
Sbjct: 114 AGSSATVAGWGATSEGGSST--PVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAG 167
Query: 296 HEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGL 355
GGKD+C Q DSGGP++ S +IG
Sbjct: 168 VSSGGKDSC------------------------------QGDSGGPIV---DSSNTLIGA 194
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDT 384
VS G GCARP G+Y + +I
Sbjct: 195 VSWGNGCARPNYSGVYASVGALRSFIDTY 223
Score = 74.1 bits (183), Expect = 2e-15
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
L KV + +VS C+A Y + + CAG GGKD+C DSGGP++
Sbjct: 134 PVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAGVSSGGKDSCQGDSGGPIV---D 186
Query: 63 ESTQVIGLVSTGIG 76
S +IG VS G G
Sbjct: 187 SSNTLIGAVSWGNG 200
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 242 bits (620), Expect = 4e-79
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 43/273 (15%)
Query: 116 KIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
+I+GG +P P++ S++ G H CGG +I QW++TAAHC V L
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKG---QSPTVVL 58
Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
H LS+ S T+ + + + + +NDI L++L + + + ++ + S +
Sbjct: 59 GAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTS 118
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
S V GWG T+ + R S+ L++V ++V+S ++C + G + + +C
Sbjct: 119 LRSGTKCKVTGWGATDPD--SLRPSDTLREVTVTVLSRKLCNSQSYYNGDPF-ITKDMVC 175
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
AG +G KD+C + D+GGPL+ G
Sbjct: 176 AGDAKGQKDSC------------------------------KGDAGGPLICKG----VFH 201
Query: 354 GLVSTGIGCARPRLPGLYTRLT-RYIGWISDTL 385
+VS G C PG+YT LT +Y WI L
Sbjct: 202 AIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234
Score = 73.4 bits (181), Expect = 4e-15
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S+ L++V ++V+S ++C + G + + +CAG +G KD+C D+GGPL+ G
Sbjct: 141 SDTLREVTVTVLSRKLCNSQSYYNGDPF-ITKDMVCAGDAKGQKDSCKGDAGGPLICKG- 198
Query: 63 ESTQVIGLVSTGIG 76
+VS G
Sbjct: 199 ---VFHAIVSGGHE 209
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 242 bits (620), Expect = 5e-79
Identities = 83/283 (29%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNGPSP---------- 165
I G A G PWI L G FCGG+++ WIVTAAHCL P
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 166 LSASQINVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
LS S + L +H R + V HP + ++F ND+AL+EL S + +
Sbjct: 61 LSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFV 120
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
P CLP G V V+GWG L ++ + +V + CQ Y K
Sbjct: 121 MPICLPEGPQQEG-AMVIVSGWGKQFLQRF----PETLMEIEIPIVDHSTCQKAYAPLKK 175
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
K+ +CAG ++GGKDAC DSGGP++
Sbjct: 176 KV--TRDMICAGEKEGGKDAC------------------------------AGDSGGPMV 203
Query: 344 LLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
L E Q ++G VS G C + G+Y+ + WI
Sbjct: 204 TLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRV 246
Score = 76.9 bits (190), Expect = 2e-16
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
L ++ + +V + CQ Y KK+ +CAG ++GGKDAC DSGGP++ L
Sbjct: 150 PETLMEIEIPIVDHSTCQKAYAPLKKKV--TRDMICAGEKEGGKDACAGDSGGPMVTLNR 207
Query: 63 ESTQ--VIGLVSTGIG 76
E Q ++G VS G
Sbjct: 208 ERGQWYLVGTVSWGDD 223
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 241 bits (618), Expect = 6e-79
Identities = 87/274 (31%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
IVGG A+ GE+PW V+L H CGG+II QWI+TAAHC SP + V
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESP---KILRV 57
Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
+ S S V I+ H + + DIALL+L ++ ++D RP LPS
Sbjct: 58 YSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSK 117
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
V GWG+ + N LQK + +V+N+ CQ Y+ +
Sbjct: 118 GERNVIYTDCWVTGWGYRKLR---DKIQNTLQKAKIPLVTNEECQKRYRGH----KITHK 170
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+CAG+ +GGKDAC + DSGGPL E
Sbjct: 171 MICAGYREGGKDAC------------------------------KGDSGGPLSCKHNEVW 200
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
++G+ S G GCA+ PG+YT + Y+ WI +
Sbjct: 201 HLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234
Score = 76.9 bits (190), Expect = 2e-16
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N LQK + +V+N+ CQ Y+ + +CAG+ +GGKDAC DSGGPL
Sbjct: 142 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHN 197
Query: 63 ESTQVIGLVSTGIG 76
E ++G+ S G G
Sbjct: 198 EVWHLVGITSWGEG 211
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 241 bits (617), Expect = 7e-79
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 50/269 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
+VGG A GEFP++V L CGG + + ++TAAHC+ + + I T
Sbjct: 1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNN---TSITATGG 53
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
DL S V +++ P + ++ D AL++L + I +P + + Y+
Sbjct: 54 VVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAYN 108
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
+ + TVAGWG E G + L K + VS+ C++ V +CAG+
Sbjct: 109 QGTFTVAGWGANREG---GSQQRYLLKANVPFVSDAACRSSSSFI----LVANEMICAGY 161
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST-QVIGL 355
+ +D C Q DSGGP+ +G+
Sbjct: 162 DTKQEDTC------------------------------QGDSGGPMFRKDNADEWVQVGI 191
Query: 356 VSTGIGCARPRLPGLYTRLTRYIGWISDT 384
VS G GCAR G+YT ++ + I+
Sbjct: 192 VSWGEGCARKGKYGVYTEVSTFASAIASA 220
Score = 73.8 bits (182), Expect = 2e-15
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
L K + VS+ C++ V +CAG++ +D C DSGGP+
Sbjct: 127 QRYLLKANVPFVSDAACRSSSSFI----LVANEMICAGYDTKQEDTCQGDSGGPMFRKDN 182
Query: 63 EST-QVIGLVSTGIG 76
+G+VS G G
Sbjct: 183 ADEWVQVGIVSWGEG 197
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 246 bits (629), Expect = 1e-78
Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 51/295 (17%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPS 164
CGR +IVGG + G +PW VSL+ G H CGG+++ W++TAAHC
Sbjct: 108 CGRR--KLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPE--R 163
Query: 165 PLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS------HSCSSFNNDIALLELTRSIQ 218
S+ V + P + V +++H + +NDIAL+ L+ +
Sbjct: 164 NRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLP 223
Query: 219 WSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW 277
++ I+P CLP+ + + TV GWG T G+++ +LQ+ + ++SN VC
Sbjct: 224 LTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYY---GQQAGVLQEARVPIISNDVCNGA 280
Query: 278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
+ +K CAG+ +GG DAC Q D
Sbjct: 281 DFYGNQ---IKPKMFCAGYPEGGIDAC------------------------------QGD 307
Query: 338 SGGPLMLLGAEST----QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
SGGP + + S ++ G+VS G GCA + PG+YT+++ + WI + H
Sbjct: 308 SGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTH 362
Score = 74.0 bits (182), Expect = 1e-14
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +LQ+ + ++SN VC + +K CAG+ +GG DAC DSGGP + +
Sbjct: 261 AGVLQEARVPIISNDVCNGADFYGNQ---IKPKMFCAGYPEGGIDACQGDSGGPFVCEDS 317
Query: 63 EST----QVIGLVSTGIG 76
S ++ G+VS G G
Sbjct: 318 ISRTPRWRLCGIVSWGTG 335
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 241 bits (617), Expect = 1e-78
Identities = 87/275 (31%), Positives = 136/275 (49%), Gaps = 46/275 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRH---GGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
IVGG ++ GE+PW VSL+ H CGG++I QW++TAAHC P +
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQ---DVWRI 57
Query: 174 TLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
+LS + T + I+ H ++ S N+DIAL++L +++++ +P LPS
Sbjct: 58 YSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSK 117
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+ + V GWG++ E G NILQKV + +V+N+ CQ YQ + +
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEK---GEIQNILQKVNIPLVTNEECQKRYQDY----KITQR 170
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+CAG+++GGKDAC + DSGGPL+
Sbjct: 171 MVCAGYKEGGKDAC------------------------------KGDSGGPLVCKHNGMW 200
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+++G+ S G GCAR PG+YT++ Y+ WI +
Sbjct: 201 RLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235
Score = 75.7 bits (187), Expect = 7e-16
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
NILQKV + +V+N+ CQ YQ + + +CAG+++GGKDAC DSGGPL+
Sbjct: 142 QNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAGYKEGGKDACKGDSGGPLVCKHN 197
Query: 63 ESTQVIGLVSTGIG 76
+++G+ S G G
Sbjct: 198 GMWRLVGITSWGEG 211
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 241 bits (616), Expect = 3e-78
Identities = 88/275 (32%), Positives = 124/275 (45%), Gaps = 40/275 (14%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I GG +A G++PW VS+ G H CGG+++ EQW+++AAHC PS V L
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF---PSEHHKEAYEVKLG 57
Query: 177 EHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
H L S + I+ HPS+ DIALL+L+R I +S IRP LP+
Sbjct: 58 AHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQAS 117
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN---VKES 290
+ TV GWG + S LQ++ + ++S + C + Y + K V+E
Sbjct: 118 FPNGLHCTVTGWGHVAPSVS-LLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQED 176
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+CAG+ +GGKDAC Q DSGGPL
Sbjct: 177 MVCAGYVEGGKDAC------------------------------QGDSGGPLSCPVEGLW 206
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ G+VS G C PG+YT + Y WI +
Sbjct: 207 YLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV 241
Score = 75.8 bits (187), Expect = 8e-16
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKIN---VKESQMCAGHEQGGKDACWADSGGPLML 59
LQ++ + ++S + C + Y + K V+E +CAG+ +GGKDAC DSGGPL
Sbjct: 141 PKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSC 200
Query: 60 LGAESTQVIGLVSTGIG 76
+ G+VS G
Sbjct: 201 PVEGLWYLTGIVSWGDA 217
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 239 bits (613), Expect = 4e-78
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 50/278 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
++GG A+PGEFPW +S +R G H CG +++ ++A+HC+ + + I V
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCV----DGVLPNNIRV 56
Query: 174 TLKEHDLSRPS-ISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLP- 229
S S T V H + +S++NDIA+L L SI I+ A LP
Sbjct: 57 IAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPA 116
Query: 230 SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
+ + DY+ + ++GWG T+ +ILQK ++ V++ C A G N+ +
Sbjct: 117 NNNNDYAGTTCVISGWGRTDGT---NNLPDILQKSSIPVITTAQCTAAMVGVGGA-NIWD 172
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+ +C G AC DSGGPL
Sbjct: 173 NHICVQDPAGNTGAC------------------------------NGDSGGPLNCPDG-G 201
Query: 350 TQVIGLVS----TGIGCARPRLPGLYTRLTRYIGWISD 383
T+V+G+ S +G+G P P +YTR++ Y+GWI D
Sbjct: 202 TRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239
Score = 74.6 bits (184), Expect = 1e-15
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ILQK ++ V++ C A G N+ ++ +C G AC DSGGPL
Sbjct: 142 PDILQKSSIPVITTAQCTAAMVGVGGA-NIWDNHICVQDPAGNTGACNGDSGGPLNCPDG 200
Query: 63 ESTQVIGLVS 72
T+V+G+ S
Sbjct: 201 -GTRVVGVTS 209
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 239 bits (613), Expect = 5e-78
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 51/279 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
++ G G+ PW V L CG +IH W++TAAHC+ + ++ V L
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCM------DESKKLLVRL 54
Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
E+DL R + + + HP++S S+ +NDIALL L + S I P CLP L
Sbjct: 55 GEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGL 114
Query: 234 DYSE-----QSVTVAGWGWTNEN--PSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN 286
E Q V GWG+ + ++ R+ +L + + VV + C +
Sbjct: 115 AERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSN-----M 169
Query: 287 VKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLG 346
V E+ +CAG +DAC + DSGGP++
Sbjct: 170 VSENMLCAGILGDRQDAC------------------------------EGDSGGPMVASF 199
Query: 347 AESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ ++GLVS G GC G+YT+++RY+ WI +
Sbjct: 200 HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238
Score = 73.1 bits (180), Expect = 5e-15
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +L + + VV + C + V E+ +CAG +DAC DSGGP++
Sbjct: 146 TFVLNFIKIPVVPHNECSEVMSN-----MVSENMLCAGILGDRQDACEGDSGGPMVASFH 200
Query: 63 ESTQVIGLVSTGIG 76
+ ++GLVS G G
Sbjct: 201 GTWFLVGLVSWGEG 214
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 238 bits (610), Expect = 6e-78
Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 49/269 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG A G++P+ VSL+ G H CG +I+ ++TAAHC+ + +++ V +
Sbjct: 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNL---NRLKVHVG 57
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
+ LS V + + ++ ND+AL+ LT I+++DL++P L + D
Sbjct: 58 TNYLSESG-DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLE 116
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
T+ GWG T G N LQ++ L V + C+ V +S +C
Sbjct: 117 SNPCTLTGWGSTRLG---GNTPNALQEIELIVHPQKQCERDQW------RVIDSHICTLT 167
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
+ G+ AC DSGGPL+ G IG+V
Sbjct: 168 K-RGEGAC------------------------------HGDSGGPLVANG----AQIGIV 192
Query: 357 STGIGCARPRLPGLYTRLTRYIGWISDTL 385
S G CA P +YTR++ ++ WI+ L
Sbjct: 193 SFGSPCALGE-PDVYTRVSSFVSWINANL 220
Score = 70.3 bits (173), Expect = 3e-14
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N LQ++ L V + C+ V +S +C + G+ AC DSGGPL+ G
Sbjct: 135 PNALQEIELIVHPQKQCERDQW------RVIDSHICTLTK-RGEGACHGDSGGPLVANG- 186
Query: 63 ESTQVIGLVSTGIG 76
IG+VS G
Sbjct: 187 ---AQIGIVSFGSP 197
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 240 bits (615), Expect = 1e-77
Identities = 83/317 (26%), Positives = 128/317 (40%), Gaps = 58/317 (18%)
Query: 92 LEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIHE 149
E S R IV G A G PW V L R CG ++I +
Sbjct: 9 FEKKSLEDKTERELLESYIDGR---IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISD 65
Query: 150 QWIVTAAHCLCNGPSP--LSASQINVTLKEHDLSRPSIST---VPVLRIMFHPSHSCS-S 203
+W++TAAHCL P + + + V + +H +R + + +I HP ++ +
Sbjct: 66 RWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWREN 125
Query: 204 FNNDIALLELTRSIQWSDLIRPACLP----SGSLDYSEQSVTVAGWGWTNENPSQ---GR 256
+ DIAL++L + + +SD I P CLP + SL + V GWG E +
Sbjct: 126 LDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKG 185
Query: 257 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG---HEQGGKDACWVSRQWWTP 313
+ ++LQ V L +V VC+ + I + ++ CAG E DAC
Sbjct: 186 QPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDAC--------- 231
Query: 314 HVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLY 371
+ DSGGP ++ + + +G+VS G GC R G Y
Sbjct: 232 ---------------------EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY 270
Query: 372 TRLTRYIGWISDTLDIH 388
T + R WI +D
Sbjct: 271 THVFRLKKWIQKVIDQF 287
Score = 67.8 bits (166), Expect = 5e-13
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAG---HEQGGKDACWADSGGPLML 59
++LQ V L +V VC+ + I + ++ CAG E DAC DSGGP ++
Sbjct: 187 PSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 241
Query: 60 LGAESTQ--VIGLVSTGIG 76
+ + +G+VS G G
Sbjct: 242 KSPFNNRWYQMGIVSWGEG 260
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 250 bits (640), Expect = 1e-77
Identities = 88/286 (30%), Positives = 126/286 (44%), Gaps = 46/286 (16%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCN 161
++ +IVGG A+ GE+PW V+L H CGG+II QWI+TAAHC
Sbjct: 376 MDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYG 435
Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
SP + V + S S V I+ H + + DIALL+L ++ +
Sbjct: 436 VESP---KILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 492
Query: 220 SDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
+D RP CLPS V GWG+ + N LQK + +V+N+ CQ Y
Sbjct: 493 TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLR---DKIQNTLQKAKIPLVTNEECQKRY 549
Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
+ + +CAG+ +GGKDAC + DS
Sbjct: 550 RGH----KITHKMICAGYREGGKDAC------------------------------KGDS 575
Query: 339 GGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
GGPL E ++G+ S G GCA+ PG+YT + Y+ WI +
Sbjct: 576 GGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 621
Score = 77.6 bits (191), Expect = 1e-15
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N LQK + +V+N+ CQ Y+ + +CAG+ +GGKDAC DSGGPL
Sbjct: 529 QNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDACKGDSGGPLSCKHN 584
Query: 63 ESTQVIGLVSTGIG 76
E ++G+ S G G
Sbjct: 585 EVWHLVGITSWGEG 598
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 238 bits (609), Expect = 1e-77
Identities = 56/271 (20%), Positives = 101/271 (37%), Gaps = 45/271 (16%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG ++ + PW V + FCGG+I+ +++TAA C+ S I++
Sbjct: 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDG----TKPSDISIHYG 56
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSD-LIRPACLPSGSLD- 234
+ T + + ++ + + N+ A++E I+ D + LPS D
Sbjct: 57 SSYRTTK--GTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDP 114
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
+ SV V+GWG TN + S L + +VV + C+ Y+ + + CA
Sbjct: 115 EPDTSVLVSGWGSTNFKSLE--YSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCA 172
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
G E D+G P + G ++G
Sbjct: 173 GGEYDETYIG------------------------------YGDAGDPAVQNG----TLVG 198
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ S P ++ R+ Y+ I D +
Sbjct: 199 VASYISSMP-SEFPSVFLRVGYYVLDIKDII 228
Score = 81.9 bits (203), Expect = 4e-18
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S L + +VV + C+ Y+ + + CAG E + D+G P + G
Sbjct: 136 SGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNG- 194
Query: 63 ESTQVIGLVSTGIG 76
++G+ S
Sbjct: 195 ---TLVGVASYISS 205
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 238 bits (609), Expect = 7e-77
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 49/291 (16%)
Query: 104 PCGRSLASRR--TGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCN 161
CGR R +I+GG ++ PG PW+ ++ G FC G+++H W+V+AAHC +
Sbjct: 21 ACGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSH 79
Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPS-HSCSSFNNDIALLELT---- 214
P ++V L +H +R T + + + + + ++D+ L+ L
Sbjct: 80 SPPR---DSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 136
Query: 215 RSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV 273
R S ++P CLP + +AGWG +EN S+ L++ + +V++
Sbjct: 137 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN--VSGYSSSLREALVPLVADHK 194
Query: 274 CQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPP 333
C + + + +CAG+ DAC
Sbjct: 195 CSSPEVYGAD---ISPNMLCAGYFDCKSDAC----------------------------- 222
Query: 334 LQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
Q DSGGPL + G++S G GC R PG+YTR+ Y+ WI+D
Sbjct: 223 -QGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 272
Score = 70.8 bits (174), Expect = 6e-14
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S+ L++ + +V++ C + + + +CAG+ DAC DSGGPL
Sbjct: 179 SSSLREALVPLVADHKCSSPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPLACEKN 235
Query: 63 ESTQVIGLVSTGIG 76
+ G++S G G
Sbjct: 236 GVAYLYGIISWGDG 249
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 236 bits (605), Expect = 1e-76
Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG--HFCGGTIIHEQWIVTAAHCLCNGPSP--LSASQIN 172
IV G A G PW V L R CG ++I ++W++TAAHCL P + + +
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 173 VTLKEHDLSRPSIST---VPVLRIMFHPSHSCS-SFNNDIALLELTRSIQWSDLIRPACL 228
V + +H +R + + +I HP ++ + + DIAL++L + + +SD I P CL
Sbjct: 61 VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 229 P----SGSLDYSEQSVTVAGWGWTNENPSQ---GRRSNILQKVALSVVSNQVCQAWYQSE 281
P + SL + V GWG E + + ++LQ V L +V VC+ +
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTR-- 178
Query: 282 GKKINVKESQMCAGH---EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
I + ++ CAG+ E DAC + DS
Sbjct: 179 ---IRITDNMFCAGYKPDEGKRGDAC------------------------------EGDS 205
Query: 339 GGPLMLLGAESTQ--VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
GGP ++ + + +G+VS G GC R G YT + R WI +D
Sbjct: 206 GGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF 257
Score = 68.1 bits (167), Expect = 3e-13
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWADSGGPLML 59
++LQ V L +V VC+ + I + ++ CAG+ E DAC DSGGP ++
Sbjct: 157 PSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 211
Query: 60 LGAESTQ--VIGLVSTGIG 76
+ + +G+VS G G
Sbjct: 212 KSPFNNRWYQMGIVSWGEG 230
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 236 bits (604), Expect = 1e-76
Identities = 93/287 (32%), Positives = 141/287 (49%), Gaps = 52/287 (18%)
Query: 105 CGRSLAS--RRTGKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCN 161
CG+ + G++VGG A+P +PW VSL+ R G HFCGGT+I +W++TAAHCL
Sbjct: 4 CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEK 63
Query: 162 GPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW 219
P P S V L H P + + V R+ P+ DIALL+L+
Sbjct: 64 SPRP---SSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVI 114
Query: 220 SDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
+D + PACLPS + ++ + GWG T + +L++ L V+ N+VC +
Sbjct: 115 TDKVIPACLPSPNYVVADRTECFITGWGETQGTFG----AGLLKEAQLPVIENKVCNRYE 170
Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
G+ V+ +++CAGH GG D+C Q D+
Sbjct: 171 FLNGR---VQSTELCAGHLAGGTDSC------------------------------QGDA 197
Query: 339 GGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
GGPL+ + + G+ S G+GCARP PG+Y R++R++ WI +
Sbjct: 198 GGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244
Score = 74.2 bits (183), Expect = 2e-15
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +L++ L V+ N+VC + G+ V+ +++CAGH GG D+C D+GGPL+
Sbjct: 150 AGLLKEAQLPVIENKVCNRYEFLNGR---VQSTELCAGHLAGGTDSCQGDAGGPLVCFEK 206
Query: 63 ESTQVIGLVSTGIG 76
+ + G+ S G+G
Sbjct: 207 DKYILQGVTSWGLG 220
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 239 bits (612), Expect = 7e-76
Identities = 79/310 (25%), Positives = 119/310 (38%), Gaps = 77/310 (24%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLC 160
CG L+ R + G PW+ L CGG +I E++I+TAAHC+
Sbjct: 111 CGNFLSQR----VSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVH 166
Query: 161 NGPSPLSASQINVTLKEHDLSR--------------PSISTVPVLRIMFHPSHSCSSFNN 206
+ L + L EH +S P + V + + + H + +
Sbjct: 167 GLQNDL----YEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMH 222
Query: 207 DIALLELTRSIQWSDLIRPACLPSG----SLDYSEQSVTVAGWGWTNENPSQGRRSNILQ 262
DIALL+L RS+ + I+P CLP + V GWG T G S++L
Sbjct: 223 DIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTT----ENGSSSDVLL 278
Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
+ + + C Y+ V SQ+C G +D+C
Sbjct: 279 QANVPLQPRSACSQAYRR-----AVPLSQLCVGGG-DLQDSC------------------ 314
Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQ------VIGLVSTG-IGCARPRLPGLYTRLT 375
+ DSGGPL + G+VS G + C + LPGLYT +
Sbjct: 315 ------------KGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVG 362
Query: 376 RYIGWISDTL 385
Y+ WI+DT+
Sbjct: 363 EYVQWITDTM 372
Score = 80.7 bits (199), Expect = 6e-17
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 12/80 (15%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
S++L + + + C Y+ V SQ+C G +D+C DSGGPL
Sbjct: 272 SSSDVLLQANVPLQPRSACSQAYRR-----AVPLSQLCVGGG-DLQDSCKGDSGGPLQAP 325
Query: 61 GAESTQ------VIGLVSTG 74
+ G+VS G
Sbjct: 326 AQYLGEYAPKMVEFGIVSQG 345
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 234 bits (598), Expect = 1e-75
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 53/288 (18%)
Query: 105 CGRSLAS---RRTGKIVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLC 160
CG +IV G A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC
Sbjct: 1 CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCG- 59
Query: 161 NGPSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ 218
+ V E D I + + ++ + ++ + NNDI LL+L+ +
Sbjct: 60 ------VTTSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAAS 113
Query: 219 WSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAW 277
+S + CLPS S D++ + GWG T + LQ+ +L ++SN C+ +
Sbjct: 114 FSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTN--ANTPDRLQQASLPLLSNTNCKKY 171
Query: 278 YQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
+ ++ +K++ +CAG G +C D
Sbjct: 172 WGTK-----IKDAMICAG--ASGVSSC------------------------------MGD 194
Query: 338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
SGGPL+ + ++G+VS G PG+Y R+T + W+ TL
Sbjct: 195 SGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242
Score = 71.5 bits (176), Expect = 2e-14
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ+ +L ++SN C+ ++ ++ +K++ +CAG G +C DSGGPL+
Sbjct: 152 PDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSCMGDSGGPLVCKKN 204
Query: 63 ESTQVIGLVSTGIG 76
+ ++G+VS G
Sbjct: 205 GAWTLVGIVSWGSS 218
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 234 bits (599), Expect = 3e-75
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 55/286 (19%)
Query: 117 IVGGLAANPGEFPWIVSL------KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
I+GG A G +PW+VSL H CGG++++ QW++TAAHC +
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKV---TD 57
Query: 171 INVTLKEHDLSRPSISTV-------PVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
+ ++ + V V +I+ H +S SS NDIAL+++T + I
Sbjct: 58 WRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFI 117
Query: 224 RPACLPSGSLDYSE--QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSE 281
P CLP Q+ VAGWG+ EN + S +LQ+ + ++ +C +
Sbjct: 118 GPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRT--SPMLQEARVDLIDLGLCNSTRWYN 175
Query: 282 GKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGP 341
G+ ++ + +CAG+ +G D C Q DSGGP
Sbjct: 176 GR---IRSTNVCAGYPEGKIDTC------------------------------QGDSGGP 202
Query: 342 LMLLGAEST--QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
LM + V+G+ S G+GCAR + PG+YT Y+ WI+ +
Sbjct: 203 LMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248
Score = 73.9 bits (182), Expect = 5e-15
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S +LQ+ + ++ +C + G+ ++ + +CAG+ +G D C DSGGPLM +
Sbjct: 152 SPMLQEARVDLIDLGLCNSTRWYNGR---IRSTNVCAGYPEGKIDTCQGDSGGPLMCKDS 208
Query: 63 EST--QVIGLVSTGIG 76
V+G+ S G+G
Sbjct: 209 AENSYVVVGITSWGVG 224
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 232 bits (595), Expect = 3e-75
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 47/276 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG ++ PG PW+ ++ G FC G+++H W+V+AAHC + P ++V L
Sbjct: 1 IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPR---DSVSVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPS-HSCSSFNNDIALLELT----RSIQWSDLIRPACLP 229
+H +R T + + + + + ++D+ L+ L R S ++P CLP
Sbjct: 57 QHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLP 116
Query: 230 SGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
+ +AGWG +EN S+ L++ + +V++ C + +
Sbjct: 117 EPGSTFPAGHKCQIAGWGHLDEN--VSGYSSSLREALVPLVADHKCSSPEVYGAD---IS 171
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
+ +CAG+ DAC Q DSGGPL
Sbjct: 172 PNMLCAGYFDCKSDAC------------------------------QGDSGGPLACEKNG 201
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
+ G++S G GC R PG+YTR+ Y+ WI+D
Sbjct: 202 VAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 237
Score = 70.0 bits (172), Expect = 6e-14
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S+ L++ + +V++ C + + + +CAG+ DAC DSGGPL
Sbjct: 144 SSSLREALVPLVADHKCSSPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPLACEKN 200
Query: 63 ESTQVIGLVSTGIG 76
+ G++S G G
Sbjct: 201 GVAYLYGIISWGDG 214
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 231 bits (592), Expect = 6e-75
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 47/272 (17%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG P P++ SL+R+G H CGG ++H +W++TAAHCL +Q+ + L
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRM-----AQLRLVLG 55
Query: 177 EHDLSRPSISTVPVLRIMFHPS-HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDY 235
H L P + T + + HP + ND+ALL+L ++ S IRP LPS
Sbjct: 56 LHTLDSPGL-TFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVV 114
Query: 236 SE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
+ ++AGWG T++ GR S +L+++ L V+ ++C G ++ S +C
Sbjct: 115 AAGTRCSMAGWGLTHQG---GRLSRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCL 168
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
+ + C + DSGGPL+ + G
Sbjct: 169 AADSKDQAPC------------------------------KGDSGGPLVCGK--GRVLAG 196
Query: 355 LVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
++S C P + T + Y+ WI
Sbjct: 197 VLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228
Score = 69.9 bits (172), Expect = 6e-14
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S +L+++ L V+ ++C G ++ S +C + + C DSGGPL+
Sbjct: 135 SRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCLAADSKDQAPCKGDSGGPLVCGK- 190
Query: 63 ESTQVIGLVSTGIG 76
+ G++S
Sbjct: 191 -GRVLAGVLSFSSR 203
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 231 bits (591), Expect = 6e-75
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 54/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG P VSL G HFCGG++++E W+V+AAHC S++ V L
Sbjct: 1 IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY--------KSRVEVRLG 51
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
EH++ S + R++ HP++S + +NDI L++L++ + ++P LP+ S
Sbjct: 52 EHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPT-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
+ TV+GWG T + SN LQ + + ++S C Y + + CA
Sbjct: 111 PAGTMCTVSGWGNTMSS---TADSNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
G+ +GGKD+C Q DSGGP++ G ++ G
Sbjct: 163 GYLEGGKDSC------------------------------QGDSGGPVVCNG----ELQG 188
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
+VS G GCA P PG+Y ++ + W++ T+ +
Sbjct: 189 VVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMASY 222
Score = 72.2 bits (178), Expect = 8e-15
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
SN LQ + + ++S C Y + + CAG+ +GGKD+C DSGGP++ G
Sbjct: 131 SNKLQCLNIPILSYSDCNNSYPGM-----ITNAMFCAGYLEGGKDSCQGDSGGPVVCNG- 184
Query: 63 ESTQVIGLVSTGIG 76
++ G+VS G G
Sbjct: 185 ---ELQGVVSWGYG 195
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 231 bits (591), Expect = 6e-75
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 53/273 (19%)
Query: 117 IVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
IVGG GE PW L FCGGTI+ E +I+TAAHCL A + V +
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQ------AKRFKVRV 54
Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
+ + + + V ++ H + +++ DIA+L L I + + PA LP+
Sbjct: 55 GDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTA-- 112
Query: 234 DYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
+ + ++GWG T S + LQ + V+S C+A Y + + +
Sbjct: 113 PPATGTKCLISGWGNTAS--SGADYPDELQCLDAPVLSQAKCEASYPGK-----ITSNMF 165
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
C G +GGKD+C Q DSGGP++ G Q+
Sbjct: 166 CVGFLEGGKDSC------------------------------QGDSGGPVVCNG----QL 191
Query: 353 IGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G GCA+ PG+YT++ Y+ WI +T+
Sbjct: 192 QGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224
Score = 72.2 bits (178), Expect = 8e-15
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ + V+S C+A Y + + + C G +GGKD+C DSGGP++ G
Sbjct: 136 PDELQCLDAPVLSQAKCEASYPGK-----ITSNMFCVGFLEGGKDSCQGDSGGPVVCNG- 189
Query: 63 ESTQVIGLVSTGIG 76
Q+ G+VS G G
Sbjct: 190 ---QLQGVVSWGDG 200
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 230 bits (590), Expect = 7e-75
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 51/270 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+ G G PW V+L CGG +++E+W++TAAHC ++ V L
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHC--------KMNEYTVHLG 52
Query: 177 EHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYS 236
L + + HP +S + ND+ L++L + S +++ LPS +
Sbjct: 53 SDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPS-RCEPP 111
Query: 237 EQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH 296
+ TV+GWG T + L V + ++S Q C Y+ ++ S +CAG
Sbjct: 112 GTTCTVSGWGTTTS--PDVTFPSDLMCVDVKLISPQDCTKVYKDL-----LENSMLCAGI 164
Query: 297 EQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLV 356
K+AC DSGGPL+ G + GLV
Sbjct: 165 PDSKKNAC------------------------------NGDSGGPLVCRG----TLQGLV 190
Query: 357 STG-IGCARPRLPGLYTRLTRYIGWISDTL 385
S G C +P PG+YT++ ++ WI+DT+
Sbjct: 191 SWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220
Score = 70.6 bits (174), Expect = 2e-14
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ L V + ++S Q C Y+ ++ S +CAG K+AC DSGGPL+ G
Sbjct: 131 PSDLMCVDVKLISPQDCTKVYKDL-----LENSMLCAGIPDSKKNACNGDSGGPLVCRG- 184
Query: 63 ESTQVIGLVSTG 74
+ GLVS G
Sbjct: 185 ---TLQGLVSWG 193
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 232 bits (595), Expect = 7e-75
Identities = 74/302 (24%), Positives = 117/302 (38%), Gaps = 53/302 (17%)
Query: 97 SSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG-----GHFCGGTIIHEQW 151
CG+ R KI+GG PW ++ R + CGG+++ W
Sbjct: 5 PPEELKFQCGQKTLRPRF-KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCW 63
Query: 152 IVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSF--NND 207
+++A HC + P V L L+ + + V ++ H +S + +ND
Sbjct: 64 VISATHCFIDYPKK---EDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHND 120
Query: 208 IALLEL----TRSIQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQ 262
IALL++ R Q S I+ CLPS D S + G+G N L+
Sbjct: 121 IALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLY--PEQLK 178
Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
+ ++S++ CQ + + V +CA Q D+C
Sbjct: 179 MTVVKLISHRECQQPHYYGSE---VTTKMLCAADPQWKTDSC------------------ 217
Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWIS 382
Q DSGGPL+ + G+VS G GCA PG+YTR++ ++ WI
Sbjct: 218 ------------QGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIR 265
Query: 383 DT 384
Sbjct: 266 SH 267
Score = 72.3 bits (178), Expect = 1e-14
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
L+ + ++S++ CQ + + V +CA Q D+C DSGGPL+
Sbjct: 174 PEQLKMTVVKLISHRECQQPHYYGSE---VTTKMLCAADPQWKTDSCQGDSGGPLVCSLQ 230
Query: 63 ESTQVIGLVSTGIG 76
+ G+VS G G
Sbjct: 231 GRMTLTGIVSWGRG 244
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 236 bits (603), Expect = 2e-74
Identities = 82/318 (25%), Positives = 125/318 (39%), Gaps = 58/318 (18%)
Query: 91 DLEVGGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHG--GHFCGGTIIH 148
E S R IV G A G PW V L R CG ++I
Sbjct: 143 LFEKKSLEDKTERELLESYIDGR---IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLIS 199
Query: 149 EQWIVTAAHCLCNGPSP--LSASQINVTLKEHDLSRPSISTV---PVLRIMFHPSHSCS- 202
++W++TAAHCL P + + + V + +H +R + + +I HP ++
Sbjct: 200 DRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRE 259
Query: 203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSE----QSVTVAGWGWTNENPSQ---G 255
+ + DIAL++L + + +SD I P CLP S V GWG E +
Sbjct: 260 NLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGK 319
Query: 256 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWVSRQWWT 312
+ ++LQ V L +V VC+ +I + ++ CAG+ E DAC
Sbjct: 320 GQPSVLQVVNLPIVERPVCKDST-----RIRITDNMFCAGYKPDEGKRGDAC-------- 366
Query: 313 PHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST--QVIGLVSTGIGCARPRLPGL 370
+ DSGGP ++ + +G+VS G GC R G
Sbjct: 367 ----------------------EGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 404
Query: 371 YTRLTRYIGWISDTLDIH 388
YT + R WI +D
Sbjct: 405 YTHVFRLKKWIQKVIDQF 422
Score = 66.8 bits (163), Expect = 3e-12
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGH---EQGGKDACWADSGGPLML 59
++LQ V L +V VC+ +I + ++ CAG+ E DAC DSGGP ++
Sbjct: 322 PSVLQVVNLPIVERPVCKDST-----RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVM 376
Query: 60 LGAEST--QVIGLVSTGIG 76
+ +G+VS G G
Sbjct: 377 KSPFNNRWYQMGIVSWGEG 395
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 229 bits (587), Expect = 2e-74
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 53/271 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG P+ VSL G HFCGG++I+ QW+V+AAHC S I V L
Sbjct: 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCY--------KSGIQVRLG 51
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
E +++ + + + + HPS++ ++ NNDI L++L + + + LP+ S
Sbjct: 52 EDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPT-SCA 110
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
+ ++GWG T S ++L+ + ++S+ C++ Y + + + CA
Sbjct: 111 SAGTQCLISGWGNTKS--SGTSYPDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCA 163
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
G+ +GGKD+C Q DSGGP++ G ++ G
Sbjct: 164 GYLEGGKDSC------------------------------QGDSGGPVVCSG----KLQG 189
Query: 355 LVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+VS G GCA+ PG+YT++ Y+ WI T+
Sbjct: 190 IVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220
Score = 71.8 bits (177), Expect = 9e-15
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++L+ + ++S+ C++ Y + + + CAG+ +GGKD+C DSGGP++ G
Sbjct: 132 PDVLKCLKAPILSDSSCKSAYPGQ-----ITSNMFCAGYLEGGKDSCQGDSGGPVVCSG- 185
Query: 63 ESTQVIGLVSTGIG 76
++ G+VS G G
Sbjct: 186 ---KLQGIVSWGSG 196
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 228 bits (584), Expect = 1e-73
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 53/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
+V G+ W+VSL+ H CGG++I E W++TA C L
Sbjct: 1 VVNGIPT-RTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCF----PSRDLKDYEAWLG 55
Query: 177 EHDLSRPSIS----TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
HD+ + V ++++ P +D+ L++L R D + LP+
Sbjct: 56 IHDVHGRGDEKCKQVLNVSQLVYGPE------GSDLVLMKLARPAVLDDFVSTIDLPNYG 109
Query: 233 LDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
E S +V GWG+T +L+ L ++ N+ C ++ + + ES+
Sbjct: 110 STIPEKTSCSVYGWGYTGLINY----DGLLRVAHLYIMGNEKCSQHHRGKV---TLNESE 162
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
+CAG E+ G C + D GGPL+ +
Sbjct: 163 ICAGAEKIGSGPC------------------------------EGDYGGPLVCEQHKMRM 192
Query: 352 VIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
V+G++ G GCA P PG++ R+ Y WI +
Sbjct: 193 VLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKII 226
Score = 77.7 bits (192), Expect = 1e-16
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+L+ L ++ N+ C ++ + + ES++CAG E+ G C D GGPL+
Sbjct: 132 DGLLRVAHLYIMGNEKCSQHHRGKV---TLNESEICAGAEKIGSGPCEGDYGGPLVCEQH 188
Query: 63 ESTQVIGLVSTGIG 76
+ V+G++ G G
Sbjct: 189 KMRMVLGVIVPGRG 202
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 228 bits (584), Expect = 2e-73
Identities = 83/294 (28%), Positives = 118/294 (40%), Gaps = 54/294 (18%)
Query: 105 CG-RSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCL 159
CG + ++VGG A P +PW +SL H CGGT+I ++TAAHC+
Sbjct: 1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 160 CNGPSPLSASQINVTLKEHDLSR---PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRS 216
N V L +++L V V I H + NDIAL++L +
Sbjct: 61 SN------TLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAET 114
Query: 217 IQWSDLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQ 275
++ D I+ ACLPS + V GWG N G + LQ+ VV C
Sbjct: 115 VELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTN---GPIAAELQQGLQPVVDYATCS 171
Query: 276 AWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQ 335
VKE+ +CAG + G AC
Sbjct: 172 QRDWWGTT---VKETMVCAGGD-GVISAC------------------------------N 197
Query: 336 ADSGGPLMLLGAESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
DSGGPL V G+VS +G+ C + P ++TR++ YI WI+ L +
Sbjct: 198 GDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKLQL 251
Score = 70.3 bits (173), Expect = 5e-14
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ+ VV C VKE+ +CAG + G AC DSGGPL
Sbjct: 154 AAELQQGLQPVVDYATCSQRDWWGTT---VKETMVCAGGD-GVISACNGDSGGPLNCQAD 209
Query: 63 ESTQVIGLVSTGIG 76
V G+VS G G
Sbjct: 210 GQWDVRGIVSFGSG 223
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 227 bits (582), Expect = 2e-73
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 61/279 (21%)
Query: 117 IVGGLAANPGEFPWIVSL--KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
I+GG N E ++V+L R FCGGT+I+++W++TAAHC +
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHC--------DRKNFRIK 52
Query: 175 LKEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
L H P+ VP + S + + ++ DI L+ L ++ S I P LPS
Sbjct: 53 LGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPS- 111
Query: 232 SLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
S SV + GWG + ++G ++ V ++++ ++C+A Y
Sbjct: 112 ----SPPSVGSVCRIMGWGRISP--TEGTYPDVPHCVNINLLEYEMCRAPYPEFELPA-- 163
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
+CAG +GGKD C + DSGGPL+ G
Sbjct: 164 TSRTLCAGILEGGKDTC------------------------------KGDSGGPLICNG- 192
Query: 348 ESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
Q G+ S G CA+P P YT++ ++ WI + +
Sbjct: 193 ---QFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENII 228
Score = 76.5 bits (189), Expect = 3e-16
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ V ++++ ++C+A Y +CAG +GGKD C DSGGPL+ G
Sbjct: 136 PDVPHCVNINLLEYEMCRAPYPEFELPA--TSRTLCAGILEGGKDTCKGDSGGPLICNG- 192
Query: 63 ESTQVIGLVSTGIG 76
Q G+ S G
Sbjct: 193 ---QFQGIASWGDD 203
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 227 bits (581), Expect = 2e-73
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 64/277 (23%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
++GG N E ++ + G CGGT+I+++W++TA HC + + L
Sbjct: 1 VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHCD--------RGNMRIYLG 51
Query: 177 EHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
H+L + P + + + + ++ DI L+ L R ++ S I P LPS
Sbjct: 52 MHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPS--- 108
Query: 234 DYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
+ SV + GWG ++ ++++ VCQA Y+ +
Sbjct: 109 --NPPSVGSVCRIMGWGTITS--PNATLPDVPHCANINILDYAVCQAAYK------GLAA 158
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+ +CAG +GGKD C + DSGGPL+ G
Sbjct: 159 TTLCAGILEGGKDTC------------------------------KGDSGGPLICNG--- 185
Query: 350 TQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
Q G++S G CA+PR PG+YT++ Y WI +
Sbjct: 186 -QFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSII 221
Score = 71.4 bits (176), Expect = 2e-14
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ ++++ VCQA Y+ + + +CAG +GGKD C DSGGPL+ G
Sbjct: 133 PDVPHCANINILDYAVCQAAYK------GLAATTLCAGILEGGKDTCKGDSGGPLICNG- 185
Query: 63 ESTQVIGLVSTGI 75
Q G++S G
Sbjct: 186 ---QFQGILSVGG 195
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 227 bits (580), Expect = 3e-73
Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 50/273 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG A P++ S++ +G H CGG ++ EQW+++AAHCL + ++ V L
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCL----EDAADGKVQVLLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
H LS+ PS VLR + HP + ++D+ LL+L+ +RP D
Sbjct: 57 AHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRD 116
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
+ VAGWG N GRR + LQ V L V+ C +G + E MC
Sbjct: 117 VAPGTLCDVAGWGIVNHA---GRRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERLMC 170
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
A +D+C + D+GGPL+ G +
Sbjct: 171 AE--SNRRDSC------------------------------KGDAGGPLVCGG----VLE 194
Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
G+V++G C + PG+YTR+ Y WI L
Sbjct: 195 GVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227
Score = 63.3 bits (155), Expect = 8e-12
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
RR + LQ V L V+ C +G + E MCA +D+C D+GGPL+
Sbjct: 136 RRPDSLQHVLLPVLDRATCNRRTHHDGA---ITERLMCAE--SNRRDSCKGDAGGPLVCG 190
Query: 61 GAESTQVIGLVSTGIG 76
G + G+V++G
Sbjct: 191 G----VLEGVVTSGSR 202
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 226 bits (578), Expect = 8e-73
Identities = 87/277 (31%), Positives = 127/277 (45%), Gaps = 44/277 (15%)
Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
IVGG A ++PW VSL R+ HFCGG++IH QW++TAAHC+ GP + + V
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCV--GPDVKDLATLRV 58
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
L+E L +PV RI+ HP DIALLEL + S + LP S
Sbjct: 59 QLREQHLYYQD-QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117
Query: 234 DYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKIN----VK 288
+ V GWG + + L++V + ++ N +C A Y + ++
Sbjct: 118 TFPPGMPCWVTGWGDVDNDEPLP-PPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIR 176
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
+ +CAG+ +D+C Q DSGGPL+
Sbjct: 177 DDMLCAGN--SQRDSC------------------------------QGDSGGPLVCKVNG 204
Query: 349 STQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ G+VS G GCA+P PG+YTR+T Y+ WI +
Sbjct: 205 TWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241
Score = 67.3 bits (165), Expect = 5e-13
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKIN----VKESQMCAGHEQGGKDACWADSGGPLM 58
L++V + ++ N +C A Y + +++ +CAG+ +D+C DSGGPL+
Sbjct: 142 PFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN--SQRDSCQGDSGGPLV 199
Query: 59 LLGAESTQVIGLVSTGIG 76
+ G+VS G G
Sbjct: 200 CKVNGTWLQAGVVSWGEG 217
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 226 bits (579), Expect = 9e-73
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 57/288 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHG------GHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQ 170
I GGL A+ PW ++ CGG +I WI++AAHC P
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPP---HH 57
Query: 171 INVTLKEHDLSRPSISTV--PVLRIMFHPSHSCSSFNNDIALLEL----TRSIQWSDLIR 224
+ V L P V + + H +++NDIALL+L +R Q S ++R
Sbjct: 58 LTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVR 117
Query: 225 PACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
CLP L + ++G+G S L++ + + + C + +
Sbjct: 118 TVCLPPADLQLPDWTECELSGYGKHEAL--SPFYSERLKEAHVRLYPSSRCTSQHLLNRT 175
Query: 284 KINVKESQMCAGHEQGG------KDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQAD 337
V ++ +CAG + G DAC Q D
Sbjct: 176 ---VTDNMLCAGDTRSGGPQANLHDAC------------------------------QGD 202
Query: 338 SGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
SGGPL+ L ++G++S G+GC + +PG+YT++T Y+ WI D +
Sbjct: 203 SGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNM 250
Score = 66.6 bits (163), Expect = 1e-12
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGG------KDACWADSGGP 56
S L++ + + + C + + V ++ +CAG + G DAC DSGGP
Sbjct: 150 SERLKEAHVRLYPSSRCTSQHLLNRT---VTDNMLCAGDTRSGGPQANLHDACQGDSGGP 206
Query: 57 LMLLGAESTQVIGLVSTGIG 76
L+ L ++G++S G+G
Sbjct: 207 LVCLNDGRMTLVGIISWGLG 226
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 223 bits (572), Expect = 4e-72
Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 55/271 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
+V G + P+ +L G CGG +IH W++TAAHC + V L
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK--------KPNLQVFLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
+H+L + S V+R + HP + +S + DI LL L R + S+LI+P L
Sbjct: 53 KHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCS- 111
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
+ S + GWG T + G + +Q + +VS + C+ Y + + ++ +CA
Sbjct: 112 ANTTSCHILGWGKTAD----GDFPDTIQCAYIHLVSREECEHAYPGQ-----ITQNMLCA 162
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
G E+ GKD+C Q DSGGPL+ + G
Sbjct: 163 GDEKYGKDSC------------------------------QGDSGGPLVCGD----HLRG 188
Query: 355 LVSTG-IGCARPRLPGLYTRLTRYIGWISDT 384
LVS G I C PG+YT + RY WI T
Sbjct: 189 LVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT 219
Score = 68.3 bits (168), Expect = 1e-13
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +Q + +VS + C+ Y + + ++ +CAG E+ GKD+C DSGGPL+
Sbjct: 131 PDTIQCAYIHLVSREECEHAYPGQ-----ITQNMLCAGDEKYGKDSCQGDSGGPLVCGD- 184
Query: 63 ESTQVIGLVSTG 74
+ GLVS G
Sbjct: 185 ---HLRGLVSWG 193
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 227 bits (581), Expect = 5e-72
Identities = 72/319 (22%), Positives = 117/319 (36%), Gaps = 69/319 (21%)
Query: 88 WTLDLEVGGSSPIAGVPCGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTI 146
W + +G P CG +I+GG A+ FPW V + GG +
Sbjct: 54 WV-NEVLGPELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDNP---WAGGAL 109
Query: 147 IHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSIST---VPVLRIMFHPS----- 198
I+E W++TAAH + + + + + ++ + + HP
Sbjct: 110 INEYWVLTAAHVV------EGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLA 163
Query: 199 --HSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQS---VTVAGWGWTNENPS 253
++F+NDIAL+ L ++ + P CLP S DY+ ++GWG T +
Sbjct: 164 VPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR 223
Query: 254 QGRRSNILQKVALSVVSNQVCQAWYQ----SEGKKINVKESQMCAGHEQGGKDACWVSRQ 309
+ L+ L V + C+ ++ + + +CAG E G D+C
Sbjct: 224 ----AVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSC----- 273
Query: 310 WWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ---VIGLVSTGIGCARPR 366
+ DSGG + GLVS G C
Sbjct: 274 -------------------------KGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-- 306
Query: 367 LPGLYTRLTRYIGWISDTL 385
GLYTR+ Y+ WI T+
Sbjct: 307 -YGLYTRVKNYVDWIMKTM 324
Score = 72.5 bits (178), Expect = 2e-14
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQ----SEGKKINVKESQMCAGHEQGGKDACWADSGGP 56
R+ L+ L V + C+ ++ + + +CAG E G D+C DSGG
Sbjct: 222 DRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGE-KGMDSCKGDSGGA 280
Query: 57 LMLLGAESTQ---VIGLVSTGIG 76
+ GLVS G
Sbjct: 281 FAVQDPNDKTKFYAAGLVSWGPQ 303
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 223 bits (571), Expect = 6e-72
Identities = 78/272 (28%), Positives = 110/272 (40%), Gaps = 56/272 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+ G +P PW +L FC G ++H QW+++AAHC + + L
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF--------QNSYTIGLG 52
Query: 177 EHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
H L V + HP ++ ND+ L++L S+ SD IR + S
Sbjct: 53 LHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIAS-QC 111
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
+ S V+GWG + GR +LQ V +SVVS +VC Y S C
Sbjct: 112 PTAGNSCLVSGWGLL----ANGRMPTVLQCVNVSVVSEEVCSKLYDPL-----YHPSMFC 162
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
AG Q KD+C DSGGPL+ G +
Sbjct: 163 AGGGQDQKDSC------------------------------NGDSGGPLICNG----YLQ 188
Query: 354 GLVSTGIG-CARPRLPGLYTRLTRYIGWISDT 384
GLVS G C + +PG+YT L ++ WI T
Sbjct: 189 GLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKT 220
Score = 72.9 bits (180), Expect = 4e-15
Identities = 31/76 (40%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
R +LQ V +SVVS +VC Y S CAG Q KD+C DSGGPL+
Sbjct: 130 RMPTVLQCVNVSVVSEEVCSKLYDPL-----YHPSMFCAGGGQDQKDSCNGDSGGPLICN 184
Query: 61 GAESTQVIGLVSTGIG 76
G + GLVS G
Sbjct: 185 G----YLQGLVSFGKA 196
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 224 bits (572), Expect = 7e-72
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 52/282 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKR-----HGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQI 171
I+GG PW ++ R + CGG++I W+++A HC + P
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKK---EDY 57
Query: 172 NVTLKEHDLSRPSISTV--PVLRIMFHP--SHSCSSFNNDIALLEL----TRSIQWSDLI 223
V L L+ + + V ++ H S + +NDIALL++ R Q S I
Sbjct: 58 IVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTI 117
Query: 224 RPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
+ LPS D S + G+G N L+ + ++S++ CQ +
Sbjct: 118 QTISLPSMYNDPQFGTSCEITGFGKENSTDYLY--PEQLKMTVVKLISHRECQQPHYYGS 175
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
+ V +CA Q D+C Q DSGGPL
Sbjct: 176 E---VTTKMLCAADPQWKTDSC------------------------------QGDSGGPL 202
Query: 343 MLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
+ + G+VS G GCA PG+YTR++ ++ WI
Sbjct: 203 VCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244
Score = 71.5 bits (176), Expect = 2e-14
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
L+ + ++S++ CQ + + V +CA Q D+C DSGGPL+
Sbjct: 151 PEQLKMTVVKLISHRECQQPHYYGSE---VTTKMLCAADPQWKTDSCQGDSGGPLVCSLQ 207
Query: 63 ESTQVIGLVSTGIG 76
+ G+VS G G
Sbjct: 208 GRMTLTGIVSWGRG 221
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 222 bits (569), Expect = 2e-71
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 51/275 (18%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG P P++V L C G +I + W++TAAHC N + V L
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-------KRSQVILG 53
Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
H ++R + + V + +P + ++ D+ LL+LT + + + LP D
Sbjct: 54 AHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDD 113
Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
++ VAGWG T+ + S+ L++V ++++ +VC + + + +C
Sbjct: 114 VKPGTMCQVAGWGRTHNS---ASWSDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVC 169
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
AG +GG+D+C DSG PL+ G
Sbjct: 170 AGSLRGGRDSC------------------------------NGDSGSPLLCEG----VFR 195
Query: 354 GLVSTGI--GCARPRLPGLYTRLT-RYIGWISDTL 385
G+ S G+ C PR PG+Y L+ +++ WI T+
Sbjct: 196 GVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230
Score = 70.7 bits (174), Expect = 3e-14
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
S+ L++V ++++ +VC + + + +CAG +GG+D+C DSG PL+
Sbjct: 133 SWSDTLREVEITIIDRKVCNDRNHYNFNPV-IGMNMVCAGSLRGGRDSCNGDSGSPLLCE 191
Query: 61 GAESTQVIGLVSTGIGSP 78
G G+ S G+ +
Sbjct: 192 G----VFRGVTSFGLENK 205
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 222 bits (568), Expect = 2e-71
Identities = 71/277 (25%), Positives = 108/277 (38%), Gaps = 61/277 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
++GG N E +V+ G FC GT+I+E+W++TAAHC + + L
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCD--------NTNFQMKLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPSH-SCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
H T P+ + + DI L++L + S+ I P LPS
Sbjct: 53 VHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPS--- 109
Query: 234 DYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
S SV + GWG + ++ ++++ + VCQA Y +
Sbjct: 110 --SPPSVGSVCHIMGWGSITP--IKVTYPDVPYCAYINLLDDAVCQAGYPEL----LTEY 161
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+CAG +GGKD C DSGGPL+ G
Sbjct: 162 RTLCAGILEGGKDTC------------------------------GGDSGGPLICNG--- 188
Query: 350 TQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
Q G+VS G C + PG+YT++ Y WI +
Sbjct: 189 -QFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSII 224
Score = 70.3 bits (173), Expect = 3e-14
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ ++++ + VCQA Y + +CAG +GGKD C DSGGPL+ G
Sbjct: 134 PDVPYCAYINLLDDAVCQAGYPEL----LTEYRTLCAGILEGGKDTCGGDSGGPLICNG- 188
Query: 63 ESTQVIGLVSTGI 75
Q G+VS G
Sbjct: 189 ---QFQGIVSFGA 198
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 222 bits (567), Expect = 3e-71
Identities = 77/275 (28%), Positives = 117/275 (42%), Gaps = 56/275 (20%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
+VGG +PG PW VSL+ R G HFCGG+++ EQWI+TA C + P + V L
Sbjct: 1 VVGG---HPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMP--LTGYEVWL 55
Query: 176 KEHDLSR----PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
+ PS+ VPV +++ PS + + LL+L RS+ + + CLP
Sbjct: 56 GTLFQNPQHGEPSLQRVPVAKMVCGPS------GSQLVLLKLERSVTLNQRVALICLPPE 109
Query: 232 SLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+AGWG T + +L L+V+SNQ C ++ V+ES
Sbjct: 110 WYVVPPGTKCEIAGWGETKGTGN----DTVLNVALLNVISNQECNIKHRGR-----VRES 160
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+MC AC + D GGPL S
Sbjct: 161 EMCTEGLLAPVGAC------------------------------EGDYGGPLACFTHNSW 190
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ G++ CAR R P ++TR++ ++ WI +
Sbjct: 191 VLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225
Score = 76.5 bits (189), Expect = 3e-16
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+L L+V+SNQ C ++ V+ES+MC AC D GGPL
Sbjct: 133 DTVLNVALLNVISNQECNIKHRGR-----VRESEMCTEGLLAPVGACEGDYGGPLACFTH 187
Query: 63 ESTQVIGLVSTGIG 76
S + G++
Sbjct: 188 NSWVLEGIIIPNRV 201
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 221 bits (565), Expect = 4e-71
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 57/275 (20%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
I+GG A P P++ L + CGG +I + +++TAAHC S INV
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW--------GSSINV 52
Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
TL H++ P+ +PV R + HP+++ +F+NDI LL+L R + + ++P LPS
Sbjct: 53 TLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSN 112
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+VAGWG T G+ S+ LQ+V ++V ++ C++ +
Sbjct: 113 KAQVKPGQTCSVAGWGQTAPL---GKHSHTLQEVKMTVQEDRKCESDLRHY----YDSTI 165
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
++C G + K + + DSGGPL+
Sbjct: 166 ELCVGDPEIKKTSF------------------------------KGDSGGPLVCNK---- 191
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G P P T+++ ++ WI T+
Sbjct: 192 VAQGIVSYGRNNGMP--PRACTKVSSFVHWIKKTM 224
Score = 69.8 bits (172), Expect = 5e-14
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
+ S+ LQ+V ++V ++ C++ + ++C G + K + DSGGPL+
Sbjct: 135 KHSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSFKGDSGGPLVCN 190
Query: 61 GAESTQVIGLVSTGIGSPT 79
G+VS G +
Sbjct: 191 K----VAQGIVSYGRNNGM 205
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 221 bits (565), Expect = 7e-71
Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 65/279 (23%)
Query: 117 IVGGLAANPGEFPWIVSL--KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVT 174
+VGG N E P++V+L C G +I+ +W++TAAHC I +
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCD--------RRNIRIK 52
Query: 175 LKEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
L H + + VP + + + + DI L+ L R + +S I P LPS
Sbjct: 53 LGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPS- 111
Query: 232 SLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
+ V + GWG + ++ + +V ++ C+ Y
Sbjct: 112 ----RSRGVGSRCRIMGWGKISTTTY----PDVPHCTNIFIVKHKWCEPLYPWV----PA 159
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
+CAG +GG+D C DSGGPL+ G
Sbjct: 160 DSRTLCAGILKGGRDTC------------------------------HGDSGGPLICNG- 188
Query: 348 ESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
++ G+V+ G C + P +YT++ Y WI +
Sbjct: 189 ---EMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSII 224
Score = 71.1 bits (175), Expect = 2e-14
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
++ + +V ++ C+ Y +CAG +GG+D C DSGGPL+ G
Sbjct: 134 PDVPHCTNIFIVKHKWCEPLYPWV----PADSRTLCAGILKGGRDTCHGDSGGPLICNG- 188
Query: 63 ESTQVIGLVSTGI 75
++ G+V+ G
Sbjct: 189 ---EMHGIVAGGS 198
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 221 bits (565), Expect = 7e-71
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 54/280 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
+VGG A +P +SL+ G H CGGT+I + W++TAAHC+
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV------DRELTFR 54
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
V + EH+L++ + V V +I+ HP + DIALL L +S+ + ++ L
Sbjct: 55 VVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 114
Query: 229 PSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
P + S + GWG T N G+ + LQ+ L V +C + V
Sbjct: 115 PRAGTILANNSPCYITGWGLTRTN---GQLAQTLQQAYLPTVDYAICSSSSYWGST---V 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
K S +CAG + G + C Q DSGGPL L
Sbjct: 169 KNSMVCAGGD-GVRSGC------------------------------QGDSGGPLHCLVN 197
Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
V G+ S + +GC R P ++TR++ YI WI++ +
Sbjct: 198 GQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237
Score = 68.4 bits (168), Expect = 2e-13
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ+ L V +C + VK S +CAG + G + C DSGGPL L
Sbjct: 142 AQTLQQAYLPTVDYAICSSSSYWGST---VKNSMVCAGGD-GVRSGCQGDSGGPLHCLVN 197
Query: 63 ESTQVIGLVS 72
V G+ S
Sbjct: 198 GQYAVHGVTS 207
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 220 bits (563), Expect = 8e-71
Identities = 55/272 (20%), Positives = 103/272 (37%), Gaps = 53/272 (19%)
Query: 119 GGLAANPGEFPWIVSLKRHGG---HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
GG + + PW V+++ + G CGG I+ + +++TAAHC+ + I +
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFD----QKPETIVIQY 57
Query: 176 KEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDL-IRPACLPSGSLD 234
+ +L + P + ++ + + NDIA+LEL+R ++ L +PA LP
Sbjct: 58 ESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFR 117
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
V V+G+G + + L+ L+VV C+ Y I + C
Sbjct: 118 PKTGSDVLVSGYGDGQTM---DPKDHDLKSAQLTVVDLDECRTKYGP----IFLSLQVFC 170
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
A + G D+G P + ++
Sbjct: 171 AQ--KVGVSLE------------------------------SGDAGDPTVQQD----TLV 194
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+ + P ++T++ Y+ WI D +
Sbjct: 195 GVAAYFPKRP-EGAPEVFTKVGSYVSWIQDII 225
Score = 69.5 bits (171), Expect = 7e-14
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ L+ L+VV C+ Y I + CA + G D+G P +
Sbjct: 139 DHDLKSAQLTVVDLDECRTKYGP----IFLSLQVFCAQ--KVGVSLESGDAGDPTVQQD- 191
Query: 63 ESTQVIGLVSTGIG 76
++G+ +
Sbjct: 192 ---TLVGVAAYFPK 202
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 220 bits (563), Expect = 1e-70
Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 53/274 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG+ A P +P +L +FCGG++I +WI+TAAHC+ A ++V L
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCM------DGAGFVDVVLG 54
Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
H++ + T+ H +++ +NDIA++ L + + I LPS +
Sbjct: 55 AHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTDV- 113
Query: 235 YSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCA 294
VT GWG +++ S++L++V + ++SN C A Y V + +C
Sbjct: 114 GVGTVVTPTGWGLPSDS--ALGISDVLRQVDVPIMSNADCDAVYGI------VTDGNICI 165
Query: 295 GHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIG 354
GGK C DSGGPL G G
Sbjct: 166 DST-GGKGTC------------------------------NGDSGGPLNYNG----LTYG 190
Query: 355 LVSTGIG-CARPRLPGLYTRLTRYIGWISDTLDI 387
+ S G P +TR+T ++ WI I
Sbjct: 191 ITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQTGI 224
Score = 69.1 bits (170), Expect = 9e-14
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S++L++V + ++SN C A Y V + +C GGK C DSGGPL G
Sbjct: 135 SDVLRQVDVPIMSNADCDAVYGI------VTDGNICIDST-GGKGTCNGDSGGPLNYNG- 186
Query: 63 ESTQVIGLVSTGIG 76
G+ S G
Sbjct: 187 ---LTYGITSFGAA 197
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 220 bits (564), Expect = 1e-70
Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 55/280 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
+VGG A P +PW +SL+ G H CGG++I + W++TAAHC+ SA
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCV------DSARTWR 54
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
V L EH+L+ + V + H + DIALL L + ++ A L
Sbjct: 55 VVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAAL 114
Query: 229 PSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
P + + GWG T+ G S+ L++ L V + C + V
Sbjct: 115 PPSNQILPNNNPCYITGWGKTSTG---GPLSDSLKQAWLPSVDHATCSSSGWWGST---V 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
K + +CAG G C DSGGPL
Sbjct: 169 KTTMVCAG--GGANSGC------------------------------NGDSGGPLNCQVN 196
Query: 348 ESTQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
S V G+ S + GC + P ++TR++ YI W++ +
Sbjct: 197 GSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236
Score = 66.1 bits (162), Expect = 1e-12
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S+ L++ L V + C + VK + +CAG G C DSGGPL
Sbjct: 142 SDSLKQAWLPSVDHATCSSSGWWGST---VKTTMVCAG--GGANSGCNGDSGGPLNCQVN 196
Query: 63 ESTQVIGLVS--TGIG 76
S V G+ S + G
Sbjct: 197 GSYYVHGVTSFVSSSG 212
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 218 bits (558), Expect = 4e-70
Identities = 71/275 (25%), Positives = 117/275 (42%), Gaps = 59/275 (21%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
I+GG + P P++ L+ G CGG ++ E +++TAAHC S INV
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW--------GSNINV 52
Query: 174 TLKEHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
TL H++ R + + R + HP ++ + NDI LL+L+R ++ + + P LP
Sbjct: 53 TLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRA 112
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
++ TVAGWG + ++ L++V L V ++ C + S
Sbjct: 113 QEGLRPGTLCTVAGWGRVSMRRG----TDTLREVQLRVQRDRQCLRIFGS-----YDPRR 163
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
Q+C G + K A + DSGGPL+
Sbjct: 164 QICVGDRRERKAAF------------------------------KGDSGGPLLCNN---- 189
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G P P ++TR++ ++ WI T+
Sbjct: 190 VAHGIVSYGKSSGVP--PEVFTRVSSFLPWIRTTM 222
Score = 71.4 bits (176), Expect = 1e-14
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
R ++ L++V L V ++ C + S Q+C G + K A DSGGPL+
Sbjct: 134 RGTDTLREVQLRVQRDRQCLRIFGS-----YDPRRQICVGDRRERKAAFKGDSGGPLLCN 188
Query: 61 GAESTQVIGLVSTGIGS 77
G+VS G S
Sbjct: 189 N----VAHGIVSYGKSS 201
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 219 bits (560), Expect = 5e-70
Identities = 86/281 (30%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
+VGG A P +PW VSL+ H CGGT++ + W++TAAHC+ S+
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCI------SSSRTYR 54
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACL 228
V L H LS P V V +++ H + S NDIALL+L + +D I+ CL
Sbjct: 55 VVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCL 114
Query: 229 PSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
P+ V GWG N G +ILQ+ L VV C V
Sbjct: 115 PAAGTILPNNYVCYVTGWGRLQTN---GASPDILQQGQLLVVDYATCSKPGWWGST---V 168
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGA 347
K + +CAG + G +C DSGGPL GA
Sbjct: 169 KTNMICAGGD-GIISSC------------------------------NGDSGGPLNCQGA 197
Query: 348 EST-QVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
QV G+VS + +GC P ++TR++ YI WI+ +
Sbjct: 198 NGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238
Score = 68.0 bits (167), Expect = 2e-13
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ILQ+ L VV C VK + +CAG + G +C DSGGPL GA
Sbjct: 142 PDILQQGQLLVVDYATCSKPGWWGST---VKTNMICAGGD-GIISSCNGDSGGPLNCQGA 197
Query: 63 EST-QVIGLVS 72
QV G+VS
Sbjct: 198 NGQWQVHGIVS 208
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 218 bits (558), Expect = 5e-70
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 56/274 (20%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
I+ G + PW +L R +CG ++H QW++TAAHC V L
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCR--------KKVFRVRL 52
Query: 176 KEHDLSRPSIST---VPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
+ LS S ++ + HP +S +ND+ L++L R I+ + +RP + S
Sbjct: 53 GHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSS-H 111
Query: 233 LDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQM 292
+ V+GWG T +LQ + +SV+S + C+ Y + ++
Sbjct: 112 CPSAGTKCLVSGWGTTKSPQVHF--PKVLQCLNISVLSQKRCEDAYPR-----QIDDTMF 164
Query: 293 CAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQV 352
CAG + G+D+C Q DSGGP++ G +
Sbjct: 165 CAGDK-AGRDSC------------------------------QGDSGGPVVCNG----SL 189
Query: 353 IGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
GLVS G CARP PG+YT L ++ WI +T+
Sbjct: 190 QGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223
Score = 66.0 bits (162), Expect = 1e-12
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+LQ + +SV+S + C+ Y + ++ CAG + G+D+C DSGGP++ G
Sbjct: 135 PKVLQCLNISVLSQKRCEDAYPR-----QIDDTMFCAGDK-AGRDSCQGDSGGPVVCNG- 187
Query: 63 ESTQVIGLVSTG 74
+ GLVS G
Sbjct: 188 ---SLQGLVSWG 196
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 218 bits (557), Expect = 8e-70
Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 58/272 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG A P +FP++ S++ G HFCGG +IH ++++TAA C + V L
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCF----QSQNPGVSTVVLG 56
Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
+DL R + M + ND+ LL+L R + + LP +
Sbjct: 57 AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNAT 116
Query: 235 YSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
+ VAGWG GR S + V ++V C + + +C
Sbjct: 117 VEAGTRCQVAGWGSQRSG---GRLSRFPRFVNVTVTPEDQC-------------RPNNVC 160
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
G C D G PL+ G
Sbjct: 161 TGVLTRRGGIC------------------------------NGDGGTPLVCEG----LAH 186
Query: 354 GLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+ S +G P +TR+ + WI L
Sbjct: 187 GVASFSLGPCGRG-PDFFTRVALFRDWIDGVL 217
Score = 62.9 bits (154), Expect = 1e-11
Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 17/76 (22%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
R S + V ++V C + + +C G C D G PL+
Sbjct: 136 RLSRFPRFVNVTVTPEDQC-------------RPNNVCTGVLTRRGGICNGDGGTPLVCE 182
Query: 61 GAESTQVIGLVSTGIG 76
G G+ S +G
Sbjct: 183 G----LAHGVASFSLG 194
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 218 bits (558), Expect = 8e-70
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
+VGG PW V++ H CGG ++ W++TAAHC Q V L
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY--------VDQYEVWLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
++ L + PS V + HP + F++D+ LL L++ +D++
Sbjct: 53 KNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVV 112
Query: 224 RPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGK 283
+P LP+ +GWG P++ ++ + LQ V ++++ N+ C Y
Sbjct: 113 KPIALPT-KEPKPGSKCLASGWGSI--TPTRWQKPDDLQCVFITLLPNENCAKVYLQ--- 166
Query: 284 KINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLM 343
V + +CAG GGKD C + DSGGPL+
Sbjct: 167 --KVTDVMLCAGEMGGGKDTC------------------------------RDDSGGPLI 194
Query: 344 LLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
G + G S G + C +P +P +YT L ++ WI DT+
Sbjct: 195 CDG----ILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233
Score = 71.9 bits (177), Expect = 1e-14
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ V ++++ N+ C Y V + +CAG GGKD C DSGGPL+ G
Sbjct: 144 PDDLQCVFITLLPNENCAKVYLQ-----KVTDVMLCAGEMGGGKDTCRDDSGGPLICDG- 197
Query: 63 ESTQVIGLVSTG 74
+ G S G
Sbjct: 198 ---ILQGTTSYG 206
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 216 bits (553), Expect = 2e-69
Identities = 67/273 (24%), Positives = 111/273 (40%), Gaps = 60/273 (21%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG A P +P++VSL+ GGHFCG T+I ++++AAHC+ + ++ + V L
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV----ANVNVRAVRVVLG 56
Query: 177 EHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLD 234
H+LSR P+ V RI F + + NDI +L+L S + ++ A LP+
Sbjct: 57 AHNLSRREPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRR 115
Query: 235 YSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMC 293
GWG N +++LQ++ ++VV++ + S +C
Sbjct: 116 LGNGVQCLAMGWGLLGRN---RGIASVLQELNVTVVTSL--------------CRRSNVC 158
Query: 294 AGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVI 353
C DSG PL+ G +
Sbjct: 159 TLVRGRQAGVC------------------------------FGDSGSPLVCNG----LIH 184
Query: 354 GLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
G+ S GCA P + + +++ WI +
Sbjct: 185 GIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217
Score = 55.2 bits (134), Expect = 4e-09
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 18/72 (25%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
+++LQ++ ++VV++ + S +C C+ DSG PL+
Sbjct: 135 GIASVLQELNVTVVTSLC--------------RRSNVCTLVRGRQAGVCFGDSGSPLVCN 180
Query: 61 GAESTQVIGLVS 72
G + G+ S
Sbjct: 181 G----LIHGIAS 188
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 216 bits (552), Expect = 3e-69
Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 57/276 (20%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+ G P PW +L + CGG ++ ++W++TAAHC + +V L
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCK--------KQKYSVRLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHP---SHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
+H L + V + + HP + + ++DI L+ L S D ++P L +
Sbjct: 53 DHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLAN- 111
Query: 232 SLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQ 291
Q ++GWG Q N L + + S C+ Y + + E
Sbjct: 112 LCPKVGQKCIISGWGTVTSP--QENFPNTLNCAEVKIYSQNKCERAYPGK-----ITEGM 164
Query: 292 MCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQ 351
+CAG G D C Q DSGGPL+ G
Sbjct: 165 VCAGSS-NGADTC------------------------------QGDSGGPLVCDG----M 189
Query: 352 VIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTLD 386
+ G+ S G C +P PG+YT++ RY WI T+D
Sbjct: 190 LQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTMD 225
Score = 66.4 bits (163), Expect = 7e-13
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N L + + S C+ Y + + E +CAG G D C DSGGPL+ G
Sbjct: 136 PNTLNCAEVKIYSQNKCERAYPGK-----ITEGMVCAGSS-NGADTCQGDSGGPLVCDG- 188
Query: 63 ESTQVIGLVSTGIG 76
+ G+ S G
Sbjct: 189 ---MLQGITSWGSD 199
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 216 bits (553), Expect = 4e-69
Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 76/294 (25%)
Query: 110 ASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSAS 169
A+ V PW V++ R + CGG ++ W++TAAHC
Sbjct: 1 AAP----PVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY--------ND 48
Query: 170 QINVTLKEHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRS 216
+ V L +++ PS V + + HP ++ND+ LL L++
Sbjct: 49 KYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKP 108
Query: 217 IQWSDLIRPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQ 272
+D+++P LP+ E + +GWG T P + + + LQ V L ++ N+
Sbjct: 109 ADITDVVKPITLPT-----EEPKLGSTCLASGWGST--TPIKFKYPDDLQCVNLKLLPNE 161
Query: 273 VCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDP 332
C ++ V ++ +CAG GG C
Sbjct: 162 DCDKAHEM-----KVTDAMLCAGEMDGGSYTC---------------------------- 188
Query: 333 PLQADSGGPLMLLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
+ DSGGPL+ G + G+ S G C P P +YT+L ++ WI +T+
Sbjct: 189 --EHDSGGPLICDG----ILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236
Score = 71.5 bits (176), Expect = 2e-14
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ V L ++ N+ C ++ V ++ +CAG GG C DSGGPL+ G
Sbjct: 147 PDDLQCVNLKLLPNEDCDKAHEM-----KVTDAMLCAGEMDGGSYTCEHDSGGPLICDG- 200
Query: 63 ESTQVIGLVSTGI 75
+ G+ S G
Sbjct: 201 ---ILQGITSWGP 210
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 215 bits (551), Expect = 6e-69
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 58/275 (21%)
Query: 117 IVGGLAANPGEFPWIVSL---KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
I+GG A P P++ L H CGG ++ E +++TAAHCL S INV
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL--------GSSINV 52
Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
TL H++ + +PV R + HP ++ + NDI LL+LTR +D + P LP
Sbjct: 53 TLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRS 112
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+ + +VAGWG N ++ LQ+V L V S + C A +++ + +
Sbjct: 113 LAEVKPGMMCSVAGWGRLGVN---MPSTDKLQEVDLEVQSEEKCIARFKN-----YIPFT 164
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
Q+CAG K++ DSGGPL+ G
Sbjct: 165 QICAGDPSKRKNSF------------------------------SGDSGGPLVCNG---- 190
Query: 351 QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G P +YTR++ ++ WI T+
Sbjct: 191 VAQGIVSYGRNDGTT--PDVYTRISSFLSWIHSTM 223
Score = 74.1 bits (183), Expect = 1e-15
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
++ LQ+V L V S + C A +++ + +Q+CAG K++ DSGGPL+
Sbjct: 135 PSTDKLQEVDLEVQSEEKCIARFKN-----YIPFTQICAGDPSKRKNSFSGDSGGPLVCN 189
Query: 61 GAESTQVIGLVSTGIGSPT 79
G G+VS G T
Sbjct: 190 G----VAQGIVSYGRNDGT 204
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 214 bits (548), Expect = 2e-68
Identities = 65/284 (22%), Positives = 103/284 (36%), Gaps = 66/284 (23%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG PW V++ G CGG ++H QW++TAAHC+ + + L
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM--------SDDYQIWLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
H+LS+ + V P ++D+ LL L + + +D +
Sbjct: 53 RHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAV 112
Query: 224 RPACLPSGSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEG 282
+ LP+ + S +GWG + R S LQ V L + SN+ C Y
Sbjct: 113 KILDLPTQ--EPKLGSTCYTSGWGLI--STFTNRGSGTLQCVELRLQSNEKCARAYPE-- 166
Query: 283 KKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPL 342
+ E +CA H C DSGG L
Sbjct: 167 ---KMTEFVLCATHRDDSGSIC------------------------------LGDSGGAL 193
Query: 343 MLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
+ G G+ S G CA ++T++ + WI +T+
Sbjct: 194 ICDG----VFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233
Score = 71.9 bits (177), Expect = 1e-14
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
R S LQ V L + SN+ C Y + E +CA H C DSGG L+
Sbjct: 142 RGSGTLQCVELRLQSNEKCARAYPE-----KMTEFVLCATHRDDSGSICLGDSGGALICD 196
Query: 61 GAESTQVIGLVSTGIG 76
G G+ S G
Sbjct: 197 G----VFQGITSWGYS 208
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 214 bits (548), Expect = 2e-68
Identities = 74/288 (25%), Positives = 109/288 (37%), Gaps = 73/288 (25%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG PW +L CGG ++H QW++TAAHC+ + + L
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCI--------SDNYQLWLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQW-SDL 222
H+L + V V HP + +++D+ LL LT +D
Sbjct: 53 RHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDA 112
Query: 223 IRPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWY 278
++ LP+ E V +GWG P + LQ V L ++ N C+ +
Sbjct: 113 VKVVELPT-----EEPEVGSTCLASGWGSI--EPENFSFPDDLQCVDLKILPNDECKKAH 165
Query: 279 QSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADS 338
V + +C GH +GGKD C DS
Sbjct: 166 VQ-----KVTDFMLCVGHLEGGKDTC------------------------------VGDS 190
Query: 339 GGPLMLLGAESTQVIGLVSTG-IGCARPRLPGLYTRLTRYIGWISDTL 385
GGPLM G + G+ S G + C P P + R+ Y+ WI DT+
Sbjct: 191 GGPLMCDG----VLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234
Score = 72.6 bits (179), Expect = 6e-15
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ V L ++ N C+ + V + +C GH +GGKD C DSGGPLM G
Sbjct: 145 PDDLQCVDLKILPNDECKKAHVQ-----KVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG- 198
Query: 63 ESTQVIGLVSTG 74
+ G+ S G
Sbjct: 199 ---VLQGVTSWG 207
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 214 bits (546), Expect = 4e-68
Identities = 79/287 (27%), Positives = 111/287 (38%), Gaps = 72/287 (25%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG PW V + G CGG ++H QW++TAAHC+ ++ + L
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCI--------RNKSVILLG 52
Query: 177 EHDLSRPSIS--TVPVLRIMFHPSHSCSSFNN-----------DIALLELTRSIQWSDLI 223
H L P + V HP + S N D+ LL L+ + +D +
Sbjct: 53 RHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAV 112
Query: 224 RPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
+ LP+ E ++ +GWG P + LQ V L V+SN VC +
Sbjct: 113 KVMDLPT-----QEPALGTTCYASGWGSI--EPEEFLTPKKLQCVDLHVISNDVCAQVHP 165
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
V + +CAG GGK C DSG
Sbjct: 166 Q-----KVTKFMLCAGRWTGGKSTC------------------------------SGDSG 190
Query: 340 GPLMLLGAESTQVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
GPL+ G + G+ S G CA P P LYT++ Y WI DT+
Sbjct: 191 GPLVCNG----VLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233
Score = 71.1 bits (175), Expect = 2e-14
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
LQ V L V+SN VC + V + +CAG GGK C DSGGPL+ G
Sbjct: 144 PKKLQCVDLHVISNDVCAQVHPQ-----KVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG- 197
Query: 63 ESTQVIGLVSTGI 75
+ G+ S G
Sbjct: 198 ---VLQGITSWGS 207
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 224 bits (571), Expect = 4e-68
Identities = 85/297 (28%), Positives = 128/297 (43%), Gaps = 54/297 (18%)
Query: 98 SPIAGVPCG-RSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAA 156
S + + CG ++ R +IVGG A G+ PW V++K G CGG I WI+TAA
Sbjct: 302 SLLPKLSCGVKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAA 361
Query: 157 HCLCNGPSPLSASQINVTLKEHDLSRPSIS---TVPVLRIMFHPSHSCSSFNNDIALLEL 213
HCL + + + D P + V RI+FH +++ ++ NDIAL+E+
Sbjct: 362 HCLRASKTH----RYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEM 417
Query: 214 TRSIQWSDL----IRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSV 268
+ D PAC+P + + V+GWG +N LQ + +
Sbjct: 418 KKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNER----VFSLQWGEVKL 473
Query: 269 VSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGV 328
+SN C +Y + ++ CAG G DAC
Sbjct: 474 ISN--CSKFYGNR----FYEKEMECAGTYDGSIDAC------------------------ 503
Query: 329 HWDPPLQADSGGPLMLLGAEST-QVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDT 384
+ DSGGPL+ + A + V G+VS G C +P PG+YT++ Y WIS
Sbjct: 504 ------KGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYH 554
Score = 65.7 bits (160), Expect = 8e-12
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 2 RSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLG 61
R LQ + ++SN C +Y + ++ CAG G DAC DSGGPL+ +
Sbjct: 462 RVFSLQWGEVKLISN--CSKFYGNR----FYEKEMECAGTYDGSIDACKGDSGGPLVCMD 515
Query: 62 AEST-QVIGLVSTGIG 76
A + V G+VS G
Sbjct: 516 ANNVTYVWGVVSWGEN 531
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 212 bits (543), Expect = 8e-68
Identities = 70/276 (25%), Positives = 111/276 (40%), Gaps = 60/276 (21%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
I+GG P P++ L+ FCGG +I +++TAAHC I
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA--------GRSIT 52
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
VTL H+++ + + V++ HP ++ S+ ++DI LL+L + + PS
Sbjct: 53 VTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPS 112
Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
+ VAGWG T S+ LQ+V L ++ Q C +
Sbjct: 113 QFNFVPPGRMCRVAGWGRTGVL---KPGSDTLQEVKLRLMDPQACSHFRDF------DHN 163
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
Q+C G+ + K A + DSGGPL+ G
Sbjct: 164 LQLCVGNPRKTKSAF------------------------------KGDSGGPLLCAG--- 190
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G A+P P ++TR++ Y WI+ L
Sbjct: 191 -VAQGIVSYGRSDAKP--PAVFTRISHYRPWINQIL 223
Score = 69.5 bits (171), Expect = 7e-14
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
S+ LQ+V L ++ Q C + Q+C G+ + K A DSGGPL+
Sbjct: 136 PGSDTLQEVKLRLMDPQACSHFRDF------DHNLQLCVGNPRKTKSAFKGDSGGPLLCA 189
Query: 61 GAESTQVIGLVSTGIGSPT 79
G G+VS G
Sbjct: 190 G----VAQGIVSYGRSDAK 204
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 212 bits (543), Expect = 1e-67
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 60/277 (21%)
Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
I+GG+ + P P++ L ++ CGG +I Q+++TAAHC +I
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK--------GREIT 52
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
V L HD+ + + + V + + H S++ +DI LL+L + ++ + + LPS
Sbjct: 53 VILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPS 112
Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
S ++ AGWG T S L++V L ++ + C + +
Sbjct: 113 PSDFIHPGAMCWAAGWGKTGVR---DPTSYTLREVELRIMDEKACVDYRY------YEYK 163
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
Q+C G + A DSGGPL+ G
Sbjct: 164 FQVCVGSPTTLRAAF------------------------------MGDSGGPLLCAG--- 190
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
G+VS G A+P P ++TR++ Y+ WI+ ++
Sbjct: 191 -VAHGIVSYGHPDAKP--PAIFTRVSTYVPWINAVIN 224
Score = 66.0 bits (162), Expect = 1e-12
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
S L++V L ++ + C + + Q+C G + A DSGGPL+
Sbjct: 136 PTSYTLREVELRIMDEKACVDYRY------YEYKFQVCVGSPTTLRAAFMGDSGGPLLCA 189
Query: 61 GAESTQVIGLVSTGIGSPT 79
G G+VS G
Sbjct: 190 G----VAHGIVSYGHPDAK 204
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 211 bits (541), Expect = 2e-67
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 58/276 (21%)
Query: 117 IVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
I+GG +P P++ + FCGG ++ +++++TAAHC +
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK--------GRSMT 52
Query: 173 VTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPS 230
VTL H++ + +PV + + HP ++ +NDI LL+L R+ + + +RP LP
Sbjct: 53 VTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPR 112
Query: 231 GSLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
+ VAGWG + G L +V L+V +QVC++ +QS +
Sbjct: 113 RNAHVKPGDECYVAGWGKVTPD---GEFPKTLHEVKLTVQKDQVCESQFQSS----YNRA 165
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
+++C G + + + DSGGPL+
Sbjct: 166 NEICVGDSKIKGASF------------------------------EEDSGGPLVCKR--- 192
Query: 350 TQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
G+VS G P ++TR+ ++ WI T+
Sbjct: 193 -AAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKTM 225
Score = 70.6 bits (174), Expect = 3e-14
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 1 RRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLL 60
L +V L+V +QVC++ +QS + +++C G + + DSGGPL+
Sbjct: 136 EFPKTLHEVKLTVQKDQVCESQFQSS----YNRANEICVGDSKIKGASFEEDSGGPLVCK 191
Query: 61 GAESTQVIGLVSTGIGSPT 79
G+VS G +
Sbjct: 192 R----AAAGIVSYGQTDGS 206
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 212 bits (541), Expect = 3e-67
Identities = 76/287 (26%), Positives = 116/287 (40%), Gaps = 74/287 (25%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
IVGG PW V++ + CGG +I W++TAAHC ++ V L
Sbjct: 1 IVGGYKCEKNSQPWQVAV--INEYLCGGVLIDPSWVITAAHCY--------SNNYQVLLG 50
Query: 177 EHDLSR--PSISTVPVLRIMFHPS-----------HSCSSFNNDIALLELTRSIQWSDLI 223
++L + P V + HP +ND+ LL L+ + +
Sbjct: 51 RNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGV 110
Query: 224 RPACLPSGSLDYSEQSV----TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
+ LP+ E V +GWG T NPS+ S+ LQ V + ++SN+ C Y+
Sbjct: 111 KVIDLPT-----KEPKVGSTCLASGWGST--NPSEMVVSHDLQCVNIHLLSNEKCIETYK 163
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
NV + +CAG +GGKD C DSG
Sbjct: 164 D-----NVTDVMLCAGEMEGGKDTC------------------------------AGDSG 188
Query: 340 GPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWISDTL 385
GPL+ G + G+ S G CA+P+ P +Y +L ++ WI +
Sbjct: 189 GPLICDG----VLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231
Score = 72.6 bits (179), Expect = 5e-15
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
S+ LQ V + ++SN+ C Y+ NV + +CAG +GGKD C DSGGPL+ G
Sbjct: 142 SHDLQCVNIHLLSNEKCIETYKD-----NVTDVMLCAGEMEGGKDTCAGDSGGPLICDG- 195
Query: 63 ESTQVIGLVSTGIG 76
+ G+ S G
Sbjct: 196 ---VLQGITSGGAT 206
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 211 bits (540), Expect = 4e-67
Identities = 76/280 (27%), Positives = 115/280 (41%), Gaps = 58/280 (20%)
Query: 120 GLAANPGEFPWIVSLKRHGG----HFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
G A P + W VSL+ H CGG++I W+VTA HC+ ++ V L
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCI------STSRTYQVVL 55
Query: 176 KEHDLSRPSIS----TVPVLRIMFHPS--HSCSSFNNDIALLELTRSIQWSDLIRPACLP 229
E+D S S + + HP +C + NDIAL++L+RS Q D ++ A LP
Sbjct: 56 GEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLP 115
Query: 230 SGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVK 288
++GWG G + LQ+ L V + C W VK
Sbjct: 116 PAGDILPNEAPCYISGWGRLYTG---GPLPDKLQQALLPTVDYEHCSQWDWWGIT---VK 169
Query: 289 ESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAE 348
++ +CAG + C DSGGPL A+
Sbjct: 170 KTMVCAGG--DTRSGC------------------------------NGDSGGPLNCPAAD 197
Query: 349 ST-QVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTL 385
+ QV G+ S + GC + P ++TR++ +I WI +T+
Sbjct: 198 GSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237
Score = 64.6 bits (158), Expect = 4e-12
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ+ L V + C W VK++ +CAG + C DSGGPL A
Sbjct: 142 PDKLQQALLPTVDYEHCSQWDWWGIT---VKKTMVCAGG--DTRSGCNGDSGGPLNCPAA 196
Query: 63 EST-QVIGLVSTGIG 76
+ + QV G+ S
Sbjct: 197 DGSWQVHGVTSFVSA 211
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 208 bits (533), Expect = 3e-66
Identities = 75/280 (26%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 117 IVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQIN 172
I+ G A G FP+ L + +CGG++I +WI+TAAHC+ A +
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCV------HDAVSVV 54
Query: 173 VTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGS 232
V L V RI+ H + ++ ND+AL+++ ++++D I+P LPSG
Sbjct: 55 VYLGSAVQYEGEA-VVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGE 112
Query: 233 L---DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKE 289
+ TV+GWG +N + + ILQ V+ N C Y + E
Sbjct: 113 ELNNKFENIWATVSGWGQSNTD------TVILQYTYNLVIDNDRCAQEYPPGI----IVE 162
Query: 290 SQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAES 349
S +C GK C DSGGP +L
Sbjct: 163 STICGDTS-DGKSPC------------------------------FGDSGGPFVLSD--K 189
Query: 350 TQVIGLVS--TGIGCARPRLPGLYTRLTRYIGWISDTLDI 387
+IG+VS +G GC P ++R+T Y+ WI I
Sbjct: 190 NLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNTGI 228
Score = 67.6 bits (166), Expect = 3e-13
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ ILQ V+ N C Y + ES +C GK C+ DSGGP +L
Sbjct: 135 TVILQYTYNLVIDNDRCAQEYPPGI----IVESTICGDTS-DGKSPCFGDSGGPFVLSD- 188
Query: 63 ESTQVIGLVSTGIG 76
+IG+VS G
Sbjct: 189 -KNLLIGVVSFVSG 201
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 209 bits (535), Expect = 8e-66
Identities = 52/289 (17%), Positives = 83/289 (28%), Gaps = 56/289 (19%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL-KRHGGHFCGGTIIHEQWIVTAAHCLCNGP 163
C A + + PW V L G FCGG II E +++T A C
Sbjct: 41 CVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCS---- 96
Query: 164 SPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLI 223
L I V + S+ + + + + H + + ND++LLEL IQ
Sbjct: 97 --LLHRNITVKTYFNRTSQDPL-MIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAG 153
Query: 224 RPACLPS----GSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
P C P L ++GW N L +++V + C
Sbjct: 154 LPVCTPEKDFAEHLLIPRTRGLLSGWARNG-----TDLGNSLTTRPVTLVEGEECGQVLN 208
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
V C A G
Sbjct: 209 V-----TVTTRTYCER---SSVAAM------------------------------HWMDG 230
Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLDIH 388
+ S + G++ + L T+++RY W ++ H
Sbjct: 231 SVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIMNAH 278
Score = 63.2 bits (154), Expect = 2e-11
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 8/70 (11%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N L +++V + C V C A G +
Sbjct: 187 GNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCER---SSVAAMHWMDGSVVTREHR 238
Query: 63 ESTQVIGLVS 72
S + G++
Sbjct: 239 GSWFLTGVLG 248
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 203 bits (520), Expect = 2e-64
Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 63/276 (22%)
Query: 117 IVGGLAANPGEFPWIVSLK---RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINV 173
IVGG A P P++ SL+ G HFCGGT+IH +++TAAHCL + +NV
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCL----RDIPQRLVNV 56
Query: 174 TLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSG 231
L H++ P+ V ++ + + + NDI L++L+ S + LP
Sbjct: 57 VLGAHNVRTQEPTQQHFSVAQVFLNNYDA-ENKLNDILLIQLSSPANLSASVATVQLPQQ 115
Query: 232 SLDYSEQSV-TVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKES 290
+ GWG + + +LQ++ ++VV+ +
Sbjct: 116 DQPVPHGTQCLAMGWGRVGAH---DPPAQVLQELNVTVVTFF--------------CRPH 158
Query: 291 QMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAEST 350
+C + C DSGGPL+ G
Sbjct: 159 NICTFVPRRKAGIC------------------------------FGDSGGPLICDG---- 184
Query: 351 QVIGLVSTGI-GCARPRLPGLYTRLTRYIGWISDTL 385
+ G+ S I GCA P +TR+ Y+ WI TL
Sbjct: 185 IIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220
Score = 54.9 bits (133), Expect = 6e-09
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +LQ++ ++VV+ + +C + C+ DSGGPL+ G
Sbjct: 140 AQVLQELNVTVVTFFC--------------RPHNICTFVPRRKAGICFGDSGGPLICDG- 184
Query: 63 ESTQVIGLVS 72
+ G+ S
Sbjct: 185 ---IIQGIDS 191
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 206 bits (527), Expect = 3e-64
Identities = 52/297 (17%), Positives = 84/297 (28%), Gaps = 56/297 (18%)
Query: 95 GGSSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKR-HGGHFCGGTIIHEQWIV 153
G C A + + PW V L G FCGG II E +++
Sbjct: 72 GYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVL 131
Query: 154 TAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLEL 213
T A C L I V + S+ + + + + H + + ND++LLEL
Sbjct: 132 TTAKCS------LLHRNITVKTYFNRTSQDPL-MIKITHVHVHMRYDADAGENDLSLLEL 184
Query: 214 TRSIQWSDLIRPACLP----SGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVV 269
IQ P C P + L ++GW N L +++V
Sbjct: 185 EWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNG-----TDLGNSLTTRPVTLV 239
Query: 270 SNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVH 329
+ C V C A
Sbjct: 240 EGEECGQVLNV-----TVTTRTYCER---SSVAAM------------------------- 266
Query: 330 WDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTLD 386
G + S + G++ + L T+++RY W ++
Sbjct: 267 -----HWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRYSLWFKQIMN 317
Score = 62.4 bits (152), Expect = 4e-11
Identities = 10/70 (14%), Positives = 18/70 (25%), Gaps = 8/70 (11%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
N L +++V + C V C A G +
Sbjct: 228 GNSLTTRPVTLVEGEECGQVLNV-----TVTTRTYCER---SSVAAMHWMDGSVVTREHR 279
Query: 63 ESTQVIGLVS 72
S + G++
Sbjct: 280 GSWFLTGVLG 289
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 200 bits (509), Expect = 1e-59
Identities = 60/334 (17%), Positives = 98/334 (29%), Gaps = 90/334 (26%)
Query: 97 SSPIAGVPCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAA 156
S + CG + A++ PW V++K C G +I +QW++TAA
Sbjct: 212 VSKLTDTICGVG--------NMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAA 263
Query: 157 HCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNND 207
HC +G S V + + + + + P + +D
Sbjct: 264 HCFRDGNDH---SLWRVNVGDPKSQ--WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDD 318
Query: 208 IALLELTRSIQWSDLIRPACLPSGSLDYSE------QSVTVAGWGWTNENPSQGRRSNIL 261
IALL+L + ++ S RP CLP + N+ L
Sbjct: 319 IALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPA-HFVAL 377
Query: 262 QKVALSV-----VSNQVCQAWYQSEGKKIN--------VKESQMCAGHEQGGKDACWVSR 308
L++ V C E V + +C+G + + C
Sbjct: 378 NGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQ-EDESPC---- 432
Query: 309 QWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI-----GCA 363
+ +SGG + L +GLVS G+ G A
Sbjct: 433 --------------------------KGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSA 466
Query: 364 R------------PRLPGLYTRLTRYIGWISDTL 385
P + L R W+ L
Sbjct: 467 DKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQHL 500
Score = 54.6 bits (131), Expect = 2e-08
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 14/87 (16%)
Query: 5 ILQKVALSV-----VSNQVCQAWYQSEGKKIN--------VKESQMCAGHEQGGKDACWA 51
L L++ V C E V + +C+G + + C
Sbjct: 376 ALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQ-EDESPCKG 434
Query: 52 DSGGPLMLLGAESTQVIGLVSTGIGSP 78
+SGG + L +GLVS G+ +P
Sbjct: 435 ESGGAVFLERRFRFFQVGLVSWGLYNP 461
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 204 bits (520), Expect = 3e-59
Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 50/286 (17%)
Query: 104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLKRHGG-HFCGGTIIHEQWIVTAAHCLCNG 162
+ + G++VGG A+P +PW VSL+ G HFCGGT+I +W++TAAHCL
Sbjct: 549 GKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKS 608
Query: 163 PSPLSASQINVTLKEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWS 220
P P S V L H P + + V R+ P+ DIALL+L+ +
Sbjct: 609 PRP---SSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVIT 659
Query: 221 DLIRPACLPSGSLDYSE-QSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQ 279
D + PACLPS + ++ + GWG T + +L++ L V+ N+VC +
Sbjct: 660 DKVIPACLPSPNYVVADRTECFITGWGETQGTFG----AGLLKEAQLPVIENKVCNRYEF 715
Query: 280 SEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSG 339
G+ V+ +++CAGH GG D+C Q DSG
Sbjct: 716 LNGR---VQSTELCAGHLAGGTDSC------------------------------QGDSG 742
Query: 340 GPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRLTRYIGWISDTL 385
GPL+ + + G+ S G+GCARP PG+Y R++R++ WI +
Sbjct: 743 GPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 788
Score = 72.0 bits (176), Expect = 9e-14
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +L++ L V+ N+VC + G+ V+ +++CAGH GG D+C DSGGPL+
Sbjct: 694 AGLLKEAQLPVIENKVCNRYEFLNGR---VQSTELCAGHLAGGTDSCQGDSGGPLVCFEK 750
Query: 63 ESTQVIGLVSTGIG 76
+ + G+ S G+G
Sbjct: 751 DKYILQGVTSWGLG 764
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 191 bits (487), Expect = 2e-56
Identities = 50/326 (15%), Positives = 93/326 (28%), Gaps = 92/326 (28%)
Query: 105 CGRSLASRRTGKIVGGLAANPGEFPWIVSL----KRHGGHFCGGTIIHEQWIVTAAHCLC 160
CG R+ + + PW + G C G ++ E +++TAAHC
Sbjct: 211 CGMVWEHRK--------GTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFT 262
Query: 161 NGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNNDIALL 211
I V++ + ++FHP+ ++ D+AL+
Sbjct: 263 VDDKE---HSIKVSVGGEKRDL------EIEVVLFHPNYNINGKKEAGIPEFYDYDVALI 313
Query: 212 ELTRSIQWSDLIRPACLPSGSLDYSEQSV-TVAGWGWTNE---------NPSQGRRSNIL 261
+L +++ IRP CLP + E L
Sbjct: 314 KLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 373
Query: 262 QKVALSVVSNQ---VCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACWVSRQ 309
+ + + + C+ Q V +C G + C
Sbjct: 374 TRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC----- 428
Query: 310 WWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCARP-- 365
+ DSGGPL++ +G++S G+ C
Sbjct: 429 -------------------------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKR 463
Query: 366 ------RLPGLYTRLTRYIGWISDTL 385
+ L + + W+ + L
Sbjct: 464 QKQVPAHARDFHINLFQVLPWLKEKL 489
Score = 59.2 bits (143), Expect = 8e-10
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 3 SNILQKVALSVVSNQ---VCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACW 50
L + + + + C+ Q V +C G + C
Sbjct: 370 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCR 429
Query: 51 ADSGGPLMLLGAESTQVIGLVSTGIG 76
DSGGPL++ +G++S G+
Sbjct: 430 GDSGGPLIVHKRSRFIQVGVISWGVV 455
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 171 bits (435), Expect = 1e-47
Identities = 49/327 (14%), Positives = 92/327 (28%), Gaps = 92/327 (28%)
Query: 104 PCGRSLASRRTGKIVGGLAANPGEFPWIVSLK----RHGGHFCGGTIIHEQWIVTAAHCL 159
CG R+ + PW + G C G ++ E +++TAAHC
Sbjct: 452 LCGMVWEHRKGTD--------YHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCF 503
Query: 160 CNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIMFHPS---------HSCSSFNNDIAL 210
I V++ + ++FHP+ ++ D+AL
Sbjct: 504 TVDDKE---HSIKVSVGGEKRDL------EIEVVLFHPNYNINGKKEAGIPEFYDYDVAL 554
Query: 211 LELTRSIQWSDLIRPACLPSGSLDYSEQSVT------VAGWG----WTNENPSQGRRSNI 260
++L +++ IRP CLP + +
Sbjct: 555 IKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKK 614
Query: 261 LQKVALSVVSN---QVCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACWVSR 308
L + + + + C+ Q V +C G + C
Sbjct: 615 LTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTC---- 670
Query: 309 QWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGI--GCARP- 365
+ DSGGPL++ +G++S G+ C
Sbjct: 671 --------------------------RGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQK 704
Query: 366 -------RLPGLYTRLTRYIGWISDTL 385
+ L + + W+ + L
Sbjct: 705 RQKQVPAHARDFHINLFQVLPWLKEKL 731
Score = 56.2 bits (135), Expect = 1e-08
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 3 SNILQKVALSVVSN---QVCQAWYQSEGKKIN-------VKESQMCAGHEQG--GKDACW 50
L + + + + C+ Q V +C G + C
Sbjct: 612 EKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCR 671
Query: 51 ADSGGPLMLLGAESTQVIGLVSTGIG 76
DSGGPL++ +G++S G+
Sbjct: 672 GDSGGPLIVHKRSRFIQVGVISWGVV 697
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 141 bits (358), Expect = 2e-41
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 117 IVGGLAANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTL 175
IV G A PG +PW VSL+ + G HFCGG++I+E W+VTAAHC + V
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCG-------VTTSDVVVA 53
Query: 176 KEHDLSR--PSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
E D I + + ++ + ++ + NNDI LL+L+ + +S + CLPS S
Sbjct: 54 GEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASD 113
Query: 234 DYSE-QSVTVAGWGWT 248
D++ + GWG T
Sbjct: 114 DFAAGTTCVTTGWGLT 129
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 138 bits (349), Expect = 8e-40
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 41/184 (22%)
Query: 203 SFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQGRRSNILQ 262
+++D+ LL L + +D ++ LP+ + +GWG P + +Q
Sbjct: 5 DYSHDLMLLRLQSPAKITDAVKVLELPT-QEPELGSTCEASGWGSIEPGPDDFEFPDEIQ 63
Query: 263 KVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPHVARGRVYP 322
V L+++ N C + + V ES +CAG+ GGKD C
Sbjct: 64 CVQLTLLQNTFCADAHPDK-----VTESMLCAGYLPGGKDTC------------------ 100
Query: 323 SHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG-CARPRLPGLYTRLTRYIGWI 381
DSGGPL+ G G+ S G C P +YT+L Y+ WI
Sbjct: 101 ------------MGDSGGPLICNG----MWQGITSWGHTPCGSANKPSIYTKLIFYLDWI 144
Query: 382 SDTL 385
DT+
Sbjct: 145 DDTI 148
Score = 70.3 bits (173), Expect = 7e-15
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ +Q V L+++ N C + + V ES +CAG+ GGKD C DSGGPL+ G
Sbjct: 59 PDEIQCVQLTLLQNTFCADAHPDK-----VTESMLCAGYLPGGKDTCMGDSGGPLICNG- 112
Query: 63 ESTQVIGLVSTGIG 76
G+ S G
Sbjct: 113 ---MWQGITSWGHT 123
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 100 bits (251), Expect = 3e-26
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 37/131 (28%)
Query: 255 GRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWVSRQWWTPH 314
+ LQ+ +L ++SN C+ ++ ++ +K++ +CAG G +C
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC---------- 43
Query: 315 VARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIGCARPRLPGLYTRL 374
DSGGPL+ + ++G+VS G PG+Y R+
Sbjct: 44 --------------------MGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARV 83
Query: 375 TRYIGWISDTL 385
T + W+ TL
Sbjct: 84 TALVNWVQQTL 94
Score = 74.5 bits (184), Expect = 7e-17
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 3 SNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGA 62
+ LQ+ +L ++SN C+ ++ ++ +K++ +CAG G +C DSGGPL+
Sbjct: 4 PDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSCMGDSGGPLVCKKN 56
Query: 63 ESTQVIGLVSTGIG 76
+ ++G+VS G
Sbjct: 57 GAWTLVGIVSWGSS 70
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 93.3 bits (233), Expect = 6e-24
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 117 IVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLK 176
I+GG PW V++ + CGG +++ +W++TAAHC V L
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK--------NDNYEVWLG 52
Query: 177 EHDLSR--PSISTVPVLRIMFHPS 198
H+L + V HP
Sbjct: 53 RHNLFENENTAQFFGVTADFPHPG 76
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 68.5 bits (167), Expect = 1e-13
Identities = 34/261 (13%), Positives = 84/261 (32%), Gaps = 65/261 (24%)
Query: 123 ANPGEFPWIVSLK-RHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLS 181
AN P+ GG C GT+I I+T HC+ N S +++ +V +D +
Sbjct: 12 ANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDST 71
Query: 182 RPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVT 241
+ S + + + D A+++ +I + + + + + + ++
Sbjct: 72 AVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSIRQVT-NLTGTTIK 128
Query: 242 VAGWGWTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINVKESQMCAGHEQGGK 301
++G+ + + +++ SV A+Y + +G
Sbjct: 129 ISGYPG---DKMRSTGKVSQWEMSGSVTREDTNLAYYTID----------TFSG------ 169
Query: 302 DACWVSRQWWTPHVARGRVYPSHRSGVHWDPPLQADSGGPLMLLGAESTQVIGLVSTGIG 361
+SG ++ ++ Q++G+ + G
Sbjct: 170 -----------------------------------NSGSAML---DQNQQIVGVHNAGYS 191
Query: 362 CARPRLPGLYTRLT-RYIGWI 381
+ T ++ +I
Sbjct: 192 NGT---INGGPKATAAFVEFI 209
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 42.5 bits (99), Expect = 1e-04
Identities = 20/206 (9%), Positives = 59/206 (28%), Gaps = 25/206 (12%)
Query: 124 NPGEFPW-----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
+ + I G G ++ + ++T H + +
Sbjct: 13 DTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGD--PHALKAFPSAI 70
Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ---WSDLIRPACLPSGSLDY 235
+ +I + D+A+++ + + Q ++++PA + + +
Sbjct: 71 NQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQ 124
Query: 236 SEQSVTVAGWG--------WTNENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKKINV 287
+ Q++TV G+ W ++ + +Q + N + + + I +
Sbjct: 125 TNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFN-EKNEVIGI 183
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTP 313
+ V
Sbjct: 184 HWGGVPNEFNGAVFINENVRNFLKQN 209
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 42.0 bits (98), Expect = 2e-04
Identities = 17/155 (10%), Positives = 49/155 (31%), Gaps = 24/155 (15%)
Query: 124 NPGEFPW-----IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEH 178
+ + I G G ++ + ++T H + +
Sbjct: 13 DTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHG--DPHALKAFPSAI 70
Query: 179 DLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQ---WSDLIRPACLPSGSLDY 235
+ +I + D+A+++ + + Q ++++PA + + +
Sbjct: 71 NQDNYPNGGFTAEQITKYSG------EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQ 124
Query: 236 SEQSVTVAGW--------GWTNENPSQGRRSNILQ 262
Q++TV G+ W ++ + +Q
Sbjct: 125 VNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQ 159
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 41.2 bits (96), Expect = 2e-04
Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Query: 138 GGHFCGGTII---HEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPVLRIM 194
G C I+ ++ + TA HCL +G A +
Sbjct: 19 GDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVT 78
Query: 195 FHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVTVAGWGWTNENPSQ 254
+ F +D A L + + + + + + +G+ P
Sbjct: 79 SAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQP-RGQYYSAYGYPAAAPFN 137
Query: 255 GRR 257
G+
Sbjct: 138 GQE 140
Score = 27.7 bits (61), Expect = 5.6
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 52 DSGGPLMLLGAESTQVIGLVSTGIGSPTSVV 82
SGGP L S G +V+
Sbjct: 168 SSGGPWFLGNGTGGAQNSTNSYGYTFLPNVM 198
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.0 bits (85), Expect = 0.011
Identities = 58/328 (17%), Positives = 105/328 (32%), Gaps = 112/328 (34%)
Query: 15 SNQVCQAWYQSEG---------------KKINVKESQMCA---GHEQGGKDACWA----- 51
+ ++ + + + + + +Q+ A G QG D +
Sbjct: 119 TKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGG--QGNTDDYFEELRDL 176
Query: 52 -DSGGPLM--LLGAESTQVIGLVSTGIGSP---TSVVQLLTRW------TLDLEVGGSSP 99
+ L+ L+ + + L+ T + + T + +L W T D + S P
Sbjct: 177 YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNIL-EWLENPSNTPDKDYLLSIP 235
Query: 100 IAGVP--CGRSLAS-RRTGKIVGGLAANPGEFPWIVSLKRHGGHFCGGTIIHEQWIVTAA 156
I+ P LA T K++G PGE + G T H Q +VTA
Sbjct: 236 IS-CPLIGVIQLAHYVVTAKLLG---FTPGEL---------RSYLKGATG-HSQGLVTAV 281
Query: 157 HCLCNGPSPLSASQINVTLKEHDLSRPSI--STVPVLRIMFH---------------PSH 199
++ + S S S + ++F PS
Sbjct: 282 --------AIAETD----------SWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI 323
Query: 200 SCSSFNND-------IALLELTRSIQWSDLIRPAC--LPSG-----SLDYSEQSVTVAGW 245
S N+ +++ LT+ Q D + LP+G SL +++ V+G
Sbjct: 324 LEDSLENNEGVPSPMLSISNLTQE-QVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSG- 381
Query: 246 GWTNENPSQGRRSNI-LQKVALSVVSNQ 272
P N+ L+K +Q
Sbjct: 382 -----PPQSLYGLNLTLRKAKAPSGLDQ 404
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 36.8 bits (84), Expect = 0.013
Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 37/231 (16%)
Query: 82 VQLLTRWTLDLEVGGSSPIAGVP-CGRS-LASR--RTGKIVGGLAANPGEFPWIVSLKRH 137
L + L+L + I GV G++ +A + K+ + W+ +L
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV---QCKMDFKIFWL-NL--- 189
Query: 138 GGHFCGGTIIHEQW-----IVTAAHCLCNGPS--PLSASQINVTLKEHDLSRPSISTVPV 190
T++ I + S L I L+ S+P + + V
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 191 LRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSLDYSEQSVT-------VA 243
L + + ++FN +L TR Q +D + A SLD+ ++T +
Sbjct: 250 LLNVQNAKA-WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 244 GWGWTNEN--PSQGRRSNILQKVALSVV----SNQVC--QAWYQSEGKKIN 286
+ P + +N LS++ + + W K+
Sbjct: 309 KYLDCRPQDLPREVLTTNPR---RLSIIAESIRDGLATWDNWKHVNCDKLT 356
Score = 32.1 bits (72), Expect = 0.39
Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 26/97 (26%)
Query: 150 QWIVTAAHCL----CNGPSPLSASQINVTLKEH-------------DLSRPSISTVPVL- 191
+++ L +P S I ++++ L+ S++ VL
Sbjct: 309 KYLDCRPQDLPREVLTT-NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 192 ----RIMFHPSHSCSSFNNDIALLELTRSIQWSDLIR 224
R MF S F + + S+ W D+I+
Sbjct: 368 PAEYRKMFD---RLSVFPPSAHIPTILLSLIWFDVIK 401
Score = 31.0 bits (69), Expect = 0.91
Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 49/187 (26%)
Query: 130 WIVSLKRHGG--HFCGGTI-IHEQWIVTAAHCLCNGPSPLSASQI---------NVTLKE 177
W + K+ F + I+ +++++ PS ++ I N +
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 178 HDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQW-----------SDLIRPA 226
+++SR P L++ ALLEL R + + +
Sbjct: 129 YNVSRLQ----PYLKL-------------RQALLEL-RPAKNVLIDGVLGSGKTWVALDV 170
Query: 227 CLPSGSLDYSEQSVTVAGWGWTN--ENPSQGRRSNILQKVALSVVSNQVCQAWYQSEGKK 284
C L Y Q W N S +LQK+ + N S K
Sbjct: 171 C-----LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW-TSRSDHSSNIK 224
Query: 285 INVKESQ 291
+ + Q
Sbjct: 225 LRIHSIQ 231
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase;
2.40A {Sesbania mosaic virus}
Length = 191
Score = 32.4 bits (73), Expect = 0.16
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 131 IVSLKRHGGHFCGGTIIH---EQWIVTAAHCLCNGPSPLSASQ 170
+V++K G E ++TA H CN P ++
Sbjct: 18 LVAIKSGPTTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAK 60
>3tr7_A UDG, uracil-DNA glycosylase; DNA metabolism, hydrolase; 2.20A
{Coxiella burnetii}
Length = 232
Score = 29.1 bits (66), Expect = 2.4
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 15/37 (40%)
Query: 152 IVTAAHCLCNGPSPLSA----------SQINVTLKEH 178
I+ A H PSPLSA S+ N L E
Sbjct: 187 ILKAPH-----PSPLSAARGFLGCRHFSKANQLLHEM 218
>2boo_A UDG, uracil-DNA glycosylase; base excision repair, radiation
resistance, DNA damage, DNA glycosidase, hydrolase;
1.80A {Deinococcus radiodurans}
Length = 247
Score = 28.7 bits (65), Expect = 2.4
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 14/36 (38%)
Query: 152 IVTAAHCLCNGPSPLSA---------SQINVTLKEH 178
++ + H PSPLS S+ N L++
Sbjct: 201 VIESGH-----PSPLSEQYFFGTRPFSKTNEALEKA 231
>1dc1_A Bsobi restriction endonuclease; protein-DNA complex, thermophilic
enzyme, degenerate DNA recognition, hydrolase/DNA
complex; HET: DNA; 1.70A {Geobacillus
stearothermophilus} SCOP: c.52.1.11
Length = 323
Score = 29.0 bits (64), Expect = 2.6
Identities = 29/153 (18%), Positives = 47/153 (30%), Gaps = 30/153 (19%)
Query: 174 TLKEHDLSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSIQWSDLIRPACLPSGSL 233
L + L+R IS + + I + S + W D
Sbjct: 136 ALAQQKLTRAIISALDIANIPYKWLDSRDK-----------KYTNWMD---------KPE 175
Query: 234 DYSEQSVTVAGWGWTNENPSQGRRSNILQKVALSVVSNQV------CQAWYQSEGKKINV 287
D E G WT G+ ++ + +S+V V C+ + K
Sbjct: 176 DDYELETFAKGISWTIN----GKHRTLMYNITVSLVKKNVDICLFNCEPEIYTPQKVHQQ 231
Query: 288 KESQMCAGHEQGGKDACWVSRQWWTPHVARGRV 320
E + G +GG D W T + A R+
Sbjct: 232 PEKYLLLGELKGGIDPAGADEHWKTANTALTRI 264
>3fci_A UDG, uracil-DNA glycosylase; DNA repair, alternative splicing,
disease mutation, DNA damage, glycosidase, HOST- virus
interaction, hydrolase; HET: 3FI; 1.27A {Homo sapiens}
PDB: 1emh_A* 1emj_A* 1q3f_A* 1ssp_E* 1ugh_E 1akz_A*
2oxm_A* 2oyt_A* 3fcf_A* 2hxm_A* 3fck_B* 3fcl_A* 2ssp_E*
1yuo_A 3tkb_A 4skn_E* 1okb_A
Length = 223
Score = 28.7 bits (65), Expect = 2.8
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 15/37 (40%)
Query: 152 IVTAAHCLCNGPSPLSA----------SQINVTLKEH 178
++ AH PSPLS S+ N L++
Sbjct: 182 VLQTAH-----PSPLSVYRGFFGCRHFSKTNELLQKS 213
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 28.4 bits (63), Expect = 3.4
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 10/106 (9%)
Query: 131 IVSLKRHGGHFCGGTIIHEQWIVTAAHCLCNGPSPLSASQINVTLKEHDLSRPSISTVPV 190
+ ++ G G +I + IVT H + + N+ + P
Sbjct: 39 VGTVFVKGSTLATGVLIGKNTIVTNYHVAREA----AKNPSNIIFTPAQNRDAEKNEFPT 94
Query: 191 LRIMFHP---SHSCSSFNNDIALLEL---TRSIQWSDLIRPACLPS 230
F S D+A+++L + DLI+PA +P
Sbjct: 95 PYGKFEAEEIKESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPD 140
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 28.5 bits (62), Expect = 3.5
Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 12/99 (12%)
Query: 131 IVSLKRHGGHFCGGTII------HEQWIVTAAHCLCNGPSPLSASQINVTLKEHD----- 179
+ + + G C G+++ + + +TA HC S ++ + +
Sbjct: 25 VGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84
Query: 180 -LSRPSISTVPVLRIMFHPSHSCSSFNNDIALLELTRSI 217
+ + + + + + +D LLEL +
Sbjct: 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA 123
>4eug_A UDG, UNG, protein (glycosylase); hydrolase; 1.40A {Escherichia
coli} SCOP: c.18.1.1 PDB: 5eug_A 1eug_A 2uug_A 3eug_A
2eug_A 1uug_A 1lqj_A 1lqm_A 1lqg_A 1flz_A 1eui_A 2jhq_A
Length = 229
Score = 28.3 bits (64), Expect = 3.6
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 15/37 (40%)
Query: 152 IVTAAHCLCNGPSPLSA----------SQINVTLKEH 178
++ A PSPLSA N L++H
Sbjct: 182 VLKAPQ-----PSPLSAHRGFFGCNHFVLANQWLEQH 213
>3a7n_A UDG, uracil-DNA glycosylase; UNG-UGI interactions, UNG-DNA complex,
citrate AS protein LI ligand binding, inhibitor design;
HET: FLC; 1.95A {Mycobacterium tuberculosis H37RV} PDB:
2zhx_A*
Length = 238
Score = 28.3 bits (64), Expect = 3.7
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 15/37 (40%)
Query: 152 IVTAAHCLCNGPSPLSA----------SQINVTLKEH 178
+ + H PSPLSA S+ N L
Sbjct: 197 AIESPH-----PSPLSASRGFFGSRPFSRANELLVGM 228
>3cxm_A Uracil-DNA glycosylase; base excision repair, BER, DNA damage
repair, MS SGPP, hydrolase, 5-bromouracil; 1.50A
{Leishmania naiffi}
Length = 268
Score = 28.4 bits (64), Expect = 3.7
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 15/37 (40%)
Query: 152 IVTAAHCLCNGPSPLSA----------SQINVTLKEH 178
++ H PSPLSA S N L+
Sbjct: 221 VLENVH-----PSPLSANRGWFGCRCFSACNEALQRM 252
>1udg_A Uracil-DNA glycosylase; hydrolase; 1.75A {Herpes simplex virus}
SCOP: c.18.1.1 PDB: 1lau_E 1udh_A 1udi_E 2c53_A* 2c56_A*
Length = 244
Score = 28.0 bits (63), Expect = 4.8
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 14/39 (35%)
Query: 152 IVTAAHCLCNGPSPLSA---------SQINVTLKEHDLS 181
++ +H PSPLS N L+ +S
Sbjct: 205 VLKFSH-----PSPLSKVPFGTCQHFLVANRYLETRSIS 238
>1hpg_A Glutamic acid specific protease; serine protease,
hydrolase-hydrolase inhibitor complex; 1.50A
{Streptomyces griseus} SCOP: b.47.1.1
Length = 187
Score = 27.2 bits (60), Expect = 7.1
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 13/56 (23%)
Query: 25 SEGKKINVKESQMCAGHEQGGKDACWADSGGPLMLLGAESTQVIGLVSTGIGSPTS 80
+G N+ + C+ GG DSGG + +G+ S G +
Sbjct: 124 GDGPVYNMVRTTACS---AGG------DSGGAHF----AGSVALGIHSGSSGCSGT 166
>1xp8_A RECA protein, recombinase A; recombination, radioresistance,
DNA-repair, ATPase, DNA-BIND protein, DNA binding
protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP:
c.37.1.11 d.48.1.1
Length = 366
Score = 27.3 bits (61), Expect = 8.8
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 16/53 (30%)
Query: 55 GPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGR 107
G +M LGAES + +VSTG S+ +LDL +G + G+P GR
Sbjct: 39 GSIMKLGAESKLDVQVVSTG-----SL-------SLDLALG----VGGIPRGR 75
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants,
DNA-repair, ATP-binding, DNA DA recombination, DNA
repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium
smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A*
1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A
2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A*
2zrp_A* 2zre_A* ...
Length = 349
Score = 27.3 bits (61), Expect = 9.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 16/53 (30%)
Query: 55 GPLMLLGAESTQVIGLVSTGIGSPTSVVQLLTRWTLDLEVGGSSPIAGVPCGR 107
G +M LG E Q I ++ TG S+ +LD+ +G I G+P GR
Sbjct: 26 GSVMRLGEEVRQPISVIPTG-----SI-------SLDVALG----IGGLPRGR 62
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.133 0.428
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,826,180
Number of extensions: 331432
Number of successful extensions: 1481
Number of sequences better than 10.0: 1
Number of HSP's gapped: 815
Number of HSP's successfully gapped: 304
Length of query: 388
Length of database: 6,701,793
Length adjustment: 95
Effective length of query: 293
Effective length of database: 4,049,298
Effective search space: 1186444314
Effective search space used: 1186444314
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.0 bits)