Your job contains 1 sequence.
>psy13817
KFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLR
PEISYIMSLLSLLKQTRVNRLIVPLTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDK
EKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13817
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031684 - symbol:CG8680 species:7227 "Drosophila m... 246 6.3e-21 1
MGI|MGI:107932 - symbol:Ndufs6 "NADH dehydrogenase (ubiqu... 225 1.1e-18 1
UNIPROTKB|O75380 - symbol:NDUFS6 "NADH dehydrogenase [ubi... 221 2.8e-18 1
UNIPROTKB|E1BQN0 - symbol:NDUFS6 "Uncharacterized protein... 219 4.6e-18 1
UNIPROTKB|F1S031 - symbol:NDUFS6 "Uncharacterized protein... 213 2.0e-17 1
UNIPROTKB|P23934 - symbol:NDUFS6 "NADH dehydrogenase [ubi... 210 4.1e-17 1
UNIPROTKB|A8YXY4 - symbol:NDUFS6 "NADH dehydrogenase [ubi... 210 4.1e-17 1
RGD|3156 - symbol:Ndufs6 "NADH dehydrogenase (ubiquinone)... 206 1.1e-16 1
ZFIN|ZDB-GENE-040912-86 - symbol:ndufs6 "NADH dehydrogena... 205 1.4e-16 1
WB|WBGene00009051 - symbol:nduf-6 species:6239 "Caenorhab... 185 1.8e-14 1
ASPGD|ASPL0000013439 - symbol:AN8049 species:162425 "Emer... 116 3.7e-06 1
DICTYBASE|DDB_G0267552 - symbol:DDB_G0267552 "putative NA... 96 5.0e-05 1
CGD|CAL0000301 - symbol:orf19.3611 species:5476 "Candida ... 98 0.00068 1
UNIPROTKB|Q59Y38 - symbol:CaO19.11094 "Potential mitochon... 98 0.00068 1
>FB|FBgn0031684 [details] [associations]
symbol:CG8680 species:7227 "Drosophila melanogaster"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=ISS] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISS] EMBL:AE014134 GO:GO:0008137 eggNOG:NOG81252
KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 GeneTree:ENSGT00390000015775
EMBL:BT011535 RefSeq:NP_608909.1 UniGene:Dm.6946 SMR:Q9VMU0
IntAct:Q9VMU0 MINT:MINT-782875 STRING:Q9VMU0
EnsemblMetazoa:FBtr0079025 GeneID:33744 KEGG:dme:Dmel_CG8680
UCSC:CG8680-RA FlyBase:FBgn0031684 InParanoid:Q9VMU0 OMA:KRYVNEN
OrthoDB:EOG422829 GenomeRNAi:33744 NextBio:785042 Uniprot:Q9VMU0
Length = 126
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 98 DIE--THTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPT 155
DIE THTGQ F+K+DYR RFV+ +++VN + I LI EVPPK C ERVV+CDGG GP
Sbjct: 35 DIEKVTHTGQVFDKEDYRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPL 94
Query: 156 GHPKVYINL 164
GHPKVYINL
Sbjct: 95 GHPKVYINL 103
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 38/58 (65%), Positives = 46/58 (79%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 59
F+K+DYR RFV+ +++VN + I LI EVPPK C ERVV+CDGG GP GHPKVYINL
Sbjct: 46 FDKEDYRNARFVNAKRYVNENWGIKLIEEVPPKECTERVVFCDGGDGPLGHPKVYINL 103
>MGI|MGI:107932 [details] [associations]
symbol:Ndufs6 "NADH dehydrogenase (ubiquinone) Fe-S protein
6" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISO]
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0006936 "muscle
contraction" evidence=IMP] [GO:0010259 "multicellular organismal
aging" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0022904
"respiratory electron transport chain" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0061458
"reproductive system development" evidence=IMP] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0070584 "mitochondrion
morphogenesis" evidence=IMP] [GO:0072358 "cardiovascular system
development" evidence=IMP] MGI:MGI:107932 GO:GO:0005739
GO:GO:0022900 GO:GO:0005747 eggNOG:NOG81252 HOGENOM:HOG000161276
KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 CTD:4726
GeneTree:ENSGT00390000015775 HOVERGEN:HBG006549 OMA:THTGQAW
OrthoDB:EOG4THVVK EMBL:BC086933 EMBL:L38438 IPI:IPI00128345
RefSeq:NP_035018.1 UniGene:Mm.29897 ProteinModelPortal:P52503
SMR:P52503 IntAct:P52503 STRING:P52503 PhosphoSite:P52503
PaxDb:P52503 PRIDE:P52503 Ensembl:ENSMUST00000022097 GeneID:407785
KEGG:mmu:407785 UCSC:uc007rdh.2 InParanoid:P52503 NextBio:407179
Bgee:P52503 CleanEx:MM_NDUFS6 Genevestigator:P52503
GermOnline:ENSMUSG00000021606 Uniprot:P52503
Length = 116
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 81 LIVP-LTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPK 139
L +P R V+P + THTGQ +++ DYR VRFVD++K VN FAIDLIA+ P
Sbjct: 11 LTLPRAARGFGVQVSPSGEKITHTGQVYDEKDYRRVRFVDRQKEVNENFAIDLIAQQPVN 70
Query: 140 PCKERVVWCDGGSGPTGHPKVYINL 164
+ R++ CDGG G GHPKVYINL
Sbjct: 71 EVEHRIIACDGGGGALGHPKVYINL 95
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLRP 61
+++ DYR VRFVD++K VN FAIDLIA+ P + R++ CDGG G GHPKVYINL
Sbjct: 38 YDEKDYRRVRFVDRQKEVNENFAIDLIAQQPVNEVEHRIIACDGGGGALGHPKVYINLDK 97
Query: 62 E 62
E
Sbjct: 98 E 98
>UNIPROTKB|O75380 [details] [associations]
symbol:NDUFS6 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 6, mitochondrial" species:9606 "Homo sapiens" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=NAS] [GO:0009055 "electron carrier activity" evidence=NAS]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=NAS] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IDA;NAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0022904 "respiratory electron transport chain"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 DrugBank:DB00157 GO:GO:0044281
GO:GO:0009055 Orphanet:2609 GO:GO:0005747 GO:GO:0008137
GO:GO:0006120 eggNOG:NOG81252 HOGENOM:HOG000161276 KO:K03939
Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 CTD:4726 HOVERGEN:HBG006549
OMA:THTGQAW OrthoDB:EOG4THVVK EMBL:AF044959 EMBL:BC038664
EMBL:BC046155 IPI:IPI00025344 PIR:JE0194 RefSeq:NP_004544.1
UniGene:Hs.408257 ProteinModelPortal:O75380 SMR:O75380
IntAct:O75380 MINT:MINT-1427509 STRING:O75380 PhosphoSite:O75380
UCD-2DPAGE:O75380 PaxDb:O75380 PeptideAtlas:O75380 PRIDE:O75380
DNASU:4726 Ensembl:ENST00000274137 GeneID:4726 KEGG:hsa:4726
UCSC:uc003jcy.3 GeneCards:GC05P001801 HGNC:HGNC:7713 MIM:603848
neXtProt:NX_O75380 PharmGKB:PA31523 InParanoid:O75380
PhylomeDB:O75380 ChiTaRS:NDUFS6 GenomeRNAi:4726 NextBio:18226
ArrayExpress:O75380 Bgee:O75380 CleanEx:HS_NDUFS6
Genevestigator:O75380 GermOnline:ENSG00000145494 Uniprot:O75380
Length = 124
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 47/99 (47%), Positives = 59/99 (59%)
Query: 67 MSLLSLLKQTRVNRLIVPL-TRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHVN 125
M+ LL + +PL R V+P + THTGQ ++ DYR +RFV ++K VN
Sbjct: 5 MTFCRLLNRCGEAARSLPLGARCFGVRVSPTGEKVTHTGQVYDDKDYRRIRFVGRQKEVN 64
Query: 126 TQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 164
FAIDLIAE P + RV+ CDGG G GHPKVYINL
Sbjct: 65 ENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKVYINL 103
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 35/61 (57%), Positives = 42/61 (68%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLRP 61
++ DYR +RFV ++K VN FAIDLIAE P + RV+ CDGG G GHPKVYINL
Sbjct: 46 YDDKDYRRIRFVGRQKEVNENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKVYINLDK 105
Query: 62 E 62
E
Sbjct: 106 E 106
>UNIPROTKB|E1BQN0 [details] [associations]
symbol:NDUFS6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005747 "mitochondrial respiratory chain
complex I" evidence=IEA] GO:GO:0005747 KO:K03939 Gene3D:2.60.260.40
InterPro:IPR019401 Pfam:PF10276 InterPro:IPR016668
PIRSF:PIRSF016564 CTD:4726 GeneTree:ENSGT00390000015775 OMA:KRYVNEN
EMBL:AADN02008187 IPI:IPI00588769 RefSeq:XP_419061.1
UniGene:Gga.8284 ProteinModelPortal:E1BQN0 PRIDE:E1BQN0
Ensembl:ENSGALT00000021552 GeneID:420976 KEGG:gga:420976
NextBio:20823814 Uniprot:E1BQN0
Length = 128
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 46/95 (48%), Positives = 58/95 (61%)
Query: 70 LSLLKQTRVNRLIVPLTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHVNTQFA 129
L+LL+Q L R A ++ THTGQ +++ DYR VRFV ++K VN FA
Sbjct: 18 LALLRQAAAGSL-----RFYGVRAAATGELVTHTGQVYDEKDYRRVRFVGRQKEVNKNFA 72
Query: 130 IDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 164
IDLIAE P + R++ CDGG G GHPKVYINL
Sbjct: 73 IDLIAEQPVSEVESRIISCDGGGGALGHPKVYINL 107
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 59
+++ DYR VRFV ++K VN FAIDLIAE P + R++ CDGG G GHPKVYINL
Sbjct: 50 YDEKDYRRVRFVGRQKEVNKNFAIDLIAEQPVSEVESRIISCDGGGGALGHPKVYINL 107
>UNIPROTKB|F1S031 [details] [associations]
symbol:NDUFS6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IEA] GO:GO:0005747 KO:K03939 Gene3D:2.60.260.40
InterPro:IPR019401 Pfam:PF10276 InterPro:IPR016668
PIRSF:PIRSF016564 GeneTree:ENSGT00390000015775 OMA:THTGQAW
EMBL:CU640453 RefSeq:XP_003134215.1 UniGene:Ssc.55130
Ensembl:ENSSSCT00000018632 GeneID:100520115 KEGG:ssc:100520115
Uniprot:F1S031
Length = 123
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 45/99 (45%), Positives = 60/99 (60%)
Query: 67 MSLLSLLKQTRVN-RLIVPLTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHVN 125
++ L LL ++ R ++ +R +P + THTGQ ++ DYR VRF D++K VN
Sbjct: 4 VTFLRLLGRSGAGARNLLGGSRCFGVRTSPTGEKVTHTGQAYDDGDYRRVRFSDRQKEVN 63
Query: 126 TQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 164
FAIDLIAE P RV+ CDGG G GHP+VYINL
Sbjct: 64 ENFAIDLIAEQPVSEVGSRVISCDGGGGALGHPRVYINL 102
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 35/61 (57%), Positives = 41/61 (67%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLRP 61
++ DYR VRF D++K VN FAIDLIAE P RV+ CDGG G GHP+VYINL
Sbjct: 45 YDDGDYRRVRFSDRQKEVNENFAIDLIAEQPVSEVGSRVISCDGGGGALGHPRVYINLDK 104
Query: 62 E 62
E
Sbjct: 105 E 105
>UNIPROTKB|P23934 [details] [associations]
symbol:NDUFS6 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 6, mitochondrial" species:9913 "Bos taurus" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] GO:GO:0005743 GO:GO:0022900 GO:GO:0070469
TCDB:3.D.1.6.1 eggNOG:NOG81252 HOGENOM:HOG000161276 KO:K03939
Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 EMBL:X63221 IPI:IPI00712479
PIR:S28238 RefSeq:NP_787004.1 UniGene:Bt.56
ProteinModelPortal:P23934 IntAct:P23934 STRING:P23934 PRIDE:P23934
Ensembl:ENSBTAT00000013078 GeneID:327691 KEGG:bta:327691 CTD:4726
GeneTree:ENSGT00390000015775 HOVERGEN:HBG006549 OMA:THTGQAW
OrthoDB:EOG4THVVK NextBio:20810156 ArrayExpress:P23934
Uniprot:P23934
Length = 124
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 94 APFNDIETHTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSG 153
+P + THTGQ ++ DYR VRFV ++K VN FAIDLIAE P RV+ CDGG G
Sbjct: 33 SPTGEKVTHTGQVYDDGDYRKVRFVGRQKEVNENFAIDLIAEQPVSQVGSRVISCDGGGG 92
Query: 154 PTGHPKVYINL 164
GHP+VYINL
Sbjct: 93 ALGHPRVYINL 103
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 35/61 (57%), Positives = 41/61 (67%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLRP 61
++ DYR VRFV ++K VN FAIDLIAE P RV+ CDGG G GHP+VYINL
Sbjct: 46 YDDGDYRKVRFVGRQKEVNENFAIDLIAEQPVSQVGSRVISCDGGGGALGHPRVYINLDK 105
Query: 62 E 62
E
Sbjct: 106 E 106
>UNIPROTKB|A8YXY4 [details] [associations]
symbol:NDUFS6 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 6, mitochondrial" species:9913 "Bos taurus" [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA]
GO:GO:0005747 HOGENOM:HOG000161276 Gene3D:2.60.260.40
InterPro:IPR019401 Pfam:PF10276 UniGene:Bt.56
GeneTree:ENSGT00390000015775 HOVERGEN:HBG006549 EMBL:DAAA02051422
EMBL:BC103241 IPI:IPI00883392 STRING:A8YXY4
Ensembl:ENSBTAT00000056162 InParanoid:A8YXY4 Uniprot:A8YXY4
Length = 152
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 94 APFNDIETHTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSG 153
+P + THTGQ ++ DYR VRFV ++K VN FAIDLIAE P RV+ CDGG G
Sbjct: 33 SPTGEKVTHTGQVYDDGDYRKVRFVGRQKEVNENFAIDLIAEQPVSQVGSRVISCDGGGG 92
Query: 154 PTGHPKVYINL 164
GHP+VYINL
Sbjct: 93 ALGHPRVYINL 103
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 34/58 (58%), Positives = 40/58 (68%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 59
++ DYR VRFV ++K VN FAIDLIAE P RV+ CDGG G GHP+VYINL
Sbjct: 46 YDDGDYRKVRFVGRQKEVNENFAIDLIAEQPVSQVGSRVISCDGGGGALGHPRVYINL 103
>RGD|3156 [details] [associations]
symbol:Ndufs6 "NADH dehydrogenase (ubiquinone) Fe-S protein 6"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005747 "mitochondrial respiratory
chain complex I" evidence=ISO] [GO:0006631 "fatty acid metabolic
process" evidence=ISO] [GO:0006936 "muscle contraction" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0010259
"multicellular organismal aging" evidence=ISO] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0022904 "respiratory electron
transport chain" evidence=ISO] [GO:0035264 "multicellular organism
growth" evidence=ISO] [GO:0061458 "reproductive system development"
evidence=ISO] [GO:0070469 "respiratory chain" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=ISO] [GO:0072358
"cardiovascular system development" evidence=ISO] RGD:3156
GO:GO:0005743 GO:GO:0022900 GO:GO:0070469 eggNOG:NOG81252
HOGENOM:HOG000161276 KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401
Pfam:PF10276 InterPro:IPR016668 PIRSF:PIRSF016564 CTD:4726
HOVERGEN:HBG006549 OrthoDB:EOG4THVVK EMBL:L38437 IPI:IPI00207072
PIR:JC4129 RefSeq:NP_062096.1 UniGene:Rn.154403
ProteinModelPortal:P52504 STRING:P52504 PRIDE:P52504 GeneID:29478
KEGG:rno:29478 UCSC:RGD:3156 InParanoid:P52504 NextBio:609320
Genevestigator:P52504 GermOnline:ENSRNOG00000018068 Uniprot:P52504
Length = 116
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 101 THTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKV 160
THTGQ + DYR +RFVD++K VN FAIDLIA+ P R++ CDGG G GHPKV
Sbjct: 32 THTGQVSDGKDYRGIRFVDRQKEVNENFAIDLIAQQPVNEVDRRIIACDGGGGALGHPKV 91
Query: 161 YINL 164
YINL
Sbjct: 92 YINL 95
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/57 (59%), Positives = 40/57 (70%)
Query: 6 DYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINLRPE 62
DYR +RFVD++K VN FAIDLIA+ P R++ CDGG G GHPKVYINL E
Sbjct: 42 DYRGIRFVDRQKEVNENFAIDLIAQQPVNEVDRRIIACDGGGGALGHPKVYINLDKE 98
>ZFIN|ZDB-GENE-040912-86 [details] [associations]
symbol:ndufs6 "NADH dehydrogenase (ubiquinone) Fe-S
protein 6" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] ZFIN:ZDB-GENE-040912-86 KO:K03939
Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 CTD:4726 HOVERGEN:HBG006549
EMBL:BC081528 IPI:IPI00500650 RefSeq:NP_001004651.1
UniGene:Dr.84954 ProteinModelPortal:Q66I52 STRING:Q66I52
PRIDE:Q66I52 GeneID:447913 KEGG:dre:447913 InParanoid:Q66I52
NextBio:20832432 ArrayExpress:Q66I52 Bgee:Q66I52 Uniprot:Q66I52
Length = 129
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 47/100 (47%), Positives = 61/100 (61%)
Query: 69 LLSLLKQTRV--N--RLIVPLTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHV 124
+LS K T+V N RL + + V+ +I THTGQ ++++D R RFV + K V
Sbjct: 8 ILSFGKNTKVLLNCLRLSAVPVQQYSVPVSNHGEIITHTGQVYDENDVRRARFVGRHKEV 67
Query: 125 NTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 164
N FAI+L+AE P + RVV CDGG G GHPKVYINL
Sbjct: 68 NENFAINLVAEEPVTHVESRVVSCDGGGGALGHPKVYINL 107
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 59
++++D R RFV + K VN FAI+L+AE P + RVV CDGG G GHPKVYINL
Sbjct: 50 YDENDVRRARFVGRHKEVNENFAINLVAEEPVTHVESRVVSCDGGGGALGHPKVYINL 107
>WB|WBGene00009051 [details] [associations]
symbol:nduf-6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006120 "mitochondrial electron
transport, NADH to ubiquinone" evidence=IMP] [GO:0042493 "response
to drug" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005743 GO:GO:0042493 GO:GO:0010171
GO:GO:0070469 GO:GO:0006120 eggNOG:NOG81252 HOGENOM:HOG000161276
KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
InterPro:IPR016668 PIRSF:PIRSF016564 GeneTree:ENSGT00390000015775
OMA:THTGQAW EMBL:Z71262 PIR:T21255 RefSeq:NP_492007.1
ProteinModelPortal:Q19724 SMR:Q19724 IntAct:Q19724 STRING:Q19724
PaxDb:Q19724 EnsemblMetazoa:F22D6.4.1 EnsemblMetazoa:F22D6.4.2
GeneID:184827 KEGG:cel:CELE_F22D6.4 CTD:184827 WormBase:F22D6.4
InParanoid:Q19724 NextBio:926108 Uniprot:Q19724
Length = 140
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 84 PLTRTLAKDVAPFNDIETHTGQKFEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKE 143
P + K+ A F+ + THTGQ +++ DYR RF +K VN A+ LI + PP+ C +
Sbjct: 27 PTPNQITKNNAQFDKV-THTGQAWDQSDYRLQRFDISKKSVNPNVAMHLIDQRPPEDCGD 85
Query: 144 -RVVWCDGGSGPTGHPKVYINL 164
RVV+CDGG GHPKVYINL
Sbjct: 86 KRVVFCDGGHPALGHPKVYINL 107
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 2 FEKDDYRPVRFVDKEKHVNTQFAIDLIAEVPPKPCKE-RVVWCDGGSGPTGHPKVYINL- 59
+++ DYR RF +K VN A+ LI + PP+ C + RVV+CDGG GHPKVYINL
Sbjct: 49 WDQSDYRLQRFDISKKSVNPNVAMHLIDQRPPEDCGDKRVVFCDGGHPALGHPKVYINLD 108
Query: 60 RPEI 63
+P +
Sbjct: 109 KPGV 112
>ASPGD|ASPL0000013439 [details] [associations]
symbol:AN8049 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001302 EMBL:AACD01000139 RefSeq:XP_681318.1
ProteinModelPortal:Q5AUI1 STRING:Q5AUI1
EnsemblFungi:CADANIAT00004072 GeneID:2868971 KEGG:ani:AN8049.2
eggNOG:NOG81252 HOGENOM:HOG000161276 KO:K03939 OMA:YPLEPTG
OrthoDB:EOG4XH38X Gene3D:2.60.260.40 InterPro:IPR019401
Pfam:PF10276 Uniprot:Q5AUI1
Length = 213
Score = 116 (45.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 24 AIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL-RPEI 63
AI+LI + P + K+++V CDGG GP GHP+++IN +PEI
Sbjct: 119 AIELIHKQPVRWVKDKIVSCDGGGGPLGHPRIFINTDKPEI 159
Score = 108 (43.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 129 AIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYIN 163
AI+LI + P + K+++V CDGG GP GHP+++IN
Sbjct: 119 AIELIHKQPVRWVKDKIVSCDGGGGPLGHPRIFIN 153
>DICTYBASE|DDB_G0267552 [details] [associations]
symbol:DDB_G0267552 "putative NADH dehydrogenase
(ubiquinone)" species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0267552
EMBL:AAFI02000003 eggNOG:NOG81252 KO:K03939 Gene3D:2.60.260.40
InterPro:IPR019401 Pfam:PF10276 RefSeq:XP_647123.1
ProteinModelPortal:Q55GR1 STRING:Q55GR1 PRIDE:Q55GR1
EnsemblProtists:DDB0233209 GeneID:8615927 KEGG:ddi:DDB_G0267552
InParanoid:Q55GR1 OMA:HPMVYIN Uniprot:Q55GR1
Length = 99
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 24 AIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 59
A ++I +V P + V CDGG+GP GHP VYINL
Sbjct: 40 AEEMINKVRPVEIEGSSVGCDGGNGPLGHPMVYINL 75
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 129 AIDLIAEVPPKPCKERVVWCDGGSGPTGHPKVYINL 164
A ++I +V P + V CDGG+GP GHP VYINL
Sbjct: 40 AEEMINKVRPVEIEGSSVGCDGGNGPLGHPMVYINL 75
>CGD|CAL0000301 [details] [associations]
symbol:orf19.3611 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
CGD:CAL0000301 EMBL:AACQ01000103 EMBL:AACQ01000102 eggNOG:NOG81252
KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401 Pfam:PF10276
RefSeq:XP_714455.1 RefSeq:XP_714504.1 ProteinModelPortal:Q59Y38
STRING:Q59Y38 GeneID:3643849 GeneID:3643908 KEGG:cal:CaO19.11094
KEGG:cal:CaO19.3611 Uniprot:Q59Y38
Length = 157
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 27/58 (46%), Positives = 31/58 (53%)
Query: 9 PVRFVDK--EKHVNTQFAIDLIAEVPPKPCKER---VVWCDGGSGPT--GHPKVYINL 59
P RFV K E+ AIDLIA+ P K + CDG G T GHPKV+INL
Sbjct: 71 PYRFVQKDLEEQPRPYAAIDLIAKEPIKYLSHEQGNIAVCDGNRGSTLQGHPKVFINL 128
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 27/58 (46%), Positives = 31/58 (53%)
Query: 114 PVRFVDK--EKHVNTQFAIDLIAEVPPKPCKER---VVWCDGGSGPT--GHPKVYINL 164
P RFV K E+ AIDLIA+ P K + CDG G T GHPKV+INL
Sbjct: 71 PYRFVQKDLEEQPRPYAAIDLIAKEPIKYLSHEQGNIAVCDGNRGSTLQGHPKVFINL 128
>UNIPROTKB|Q59Y38 [details] [associations]
symbol:CaO19.11094 "Potential mitochondrial Complex I,
NDUFS6_13 kd subunit" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0000301 EMBL:AACQ01000103 EMBL:AACQ01000102
eggNOG:NOG81252 KO:K03939 Gene3D:2.60.260.40 InterPro:IPR019401
Pfam:PF10276 RefSeq:XP_714455.1 RefSeq:XP_714504.1
ProteinModelPortal:Q59Y38 STRING:Q59Y38 GeneID:3643849
GeneID:3643908 KEGG:cal:CaO19.11094 KEGG:cal:CaO19.3611
Uniprot:Q59Y38
Length = 157
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 27/58 (46%), Positives = 31/58 (53%)
Query: 9 PVRFVDK--EKHVNTQFAIDLIAEVPPKPCKER---VVWCDGGSGPT--GHPKVYINL 59
P RFV K E+ AIDLIA+ P K + CDG G T GHPKV+INL
Sbjct: 71 PYRFVQKDLEEQPRPYAAIDLIAKEPIKYLSHEQGNIAVCDGNRGSTLQGHPKVFINL 128
Score = 98 (39.6 bits), Expect = 0.00068, P = 0.00068
Identities = 27/58 (46%), Positives = 31/58 (53%)
Query: 114 PVRFVDK--EKHVNTQFAIDLIAEVPPKPCKER---VVWCDGGSGPT--GHPKVYINL 164
P RFV K E+ AIDLIA+ P K + CDG G T GHPKV+INL
Sbjct: 71 PYRFVQKDLEEQPRPYAAIDLIAKEPIKYLSHEQGNIAVCDGNRGSTLQGHPKVFINL 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.140 0.440 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 164 0.00088 107 3 11 22 0.39 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 566 (60 KB)
Total size of DFA: 143 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.61u 0.07s 15.68t Elapsed: 00:00:07
Total cpu time: 15.62u 0.07s 15.69t Elapsed: 00:00:07
Start: Thu Aug 15 12:26:53 2013 End: Thu Aug 15 12:27:00 2013