Query psy1382
Match_columns 254
No_of_seqs 119 out of 1080
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 21:17:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1382.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1382hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tx2_A Probable 6-phosphogluco 100.0 1E-60 3.4E-65 425.6 18.6 204 3-220 38-250 (251)
2 3oc6_A 6-phosphogluconolactona 100.0 1.3E-60 4.5E-65 424.1 17.9 202 3-220 38-248 (248)
3 3ico_A 6PGL, 6-phosphogluconol 100.0 1.9E-60 6.4E-65 427.6 19.0 205 3-221 54-267 (268)
4 3eb9_A 6-phosphogluconolactona 100.0 5.3E-59 1.8E-63 417.7 18.4 210 2-221 34-264 (266)
5 3hn6_A Glucosamine-6-phosphate 100.0 2.4E-56 8.2E-61 404.8 22.2 198 4-223 54-271 (289)
6 1y89_A DEVB protein; structura 100.0 2.7E-55 9.2E-60 387.1 19.4 203 3-221 28-238 (238)
7 3css_A 6-phosphogluconolactona 100.0 7E-56 2.4E-60 397.3 15.6 210 2-221 35-266 (267)
8 3lwd_A 6-phosphogluconolactona 100.0 2.7E-55 9.1E-60 385.3 17.7 189 2-211 31-225 (226)
9 1vl1_A 6PGL, 6-phosphogluconol 100.0 4.7E-54 1.6E-58 378.6 18.6 188 3-214 44-232 (232)
10 3nwp_A 6-phosphogluconolactona 100.0 1.7E-53 5.7E-58 375.4 14.8 189 3-210 36-231 (233)
11 3lhi_A Putative 6-phosphogluco 100.0 2.4E-53 8.3E-58 374.0 14.8 188 3-210 33-230 (232)
12 3e15_A Glucose-6-phosphate 1-d 100.0 5.7E-52 2E-56 379.1 16.0 198 2-217 58-296 (312)
13 1ne7_A Glucosamine-6-phosphate 100.0 1.3E-47 4.4E-52 347.0 21.1 197 4-222 33-249 (289)
14 2bkx_A Glucosamine-6-phosphate 100.0 1.8E-47 6E-52 336.1 20.7 198 3-221 27-242 (242)
15 1fs5_A Glucosamine-6-phosphate 100.0 4.7E-46 1.6E-50 332.0 20.5 198 3-222 32-249 (266)
16 2ri0_A Glucosamine-6-phosphate 100.0 5E-45 1.7E-49 319.3 20.4 191 4-220 29-234 (234)
17 2r5f_A Transcriptional regulat 99.9 3.8E-22 1.3E-26 178.0 10.3 179 4-220 57-262 (264)
18 2okg_A Central glycolytic gene 99.9 2E-22 6.8E-27 179.0 4.3 178 4-220 56-251 (255)
19 2gnp_A Transcriptional regulat 99.8 1.1E-20 3.7E-25 168.8 8.6 182 4-220 57-259 (266)
20 2o0m_A Transcriptional regulat 99.8 3.7E-20 1.3E-24 170.6 3.3 179 5-221 143-340 (345)
21 2w48_A Sorbitol operon regulat 99.8 3.2E-19 1.1E-23 162.2 8.6 181 4-220 109-313 (315)
22 3nze_A Putative transcriptiona 99.5 1.4E-13 4.7E-18 122.9 11.5 179 4-221 56-262 (267)
23 3efb_A Probable SOR-operon reg 99.2 3.8E-11 1.3E-15 106.8 8.9 182 4-220 60-264 (266)
24 3kv1_A Transcriptional repress 99.1 4.7E-11 1.6E-15 106.4 5.0 182 4-220 55-259 (267)
25 1t35_A Hypothetical protein YV 47.4 27 0.00094 28.6 5.2 76 4-88 98-176 (191)
26 3sbx_A Putative uncharacterize 28.5 25 0.00087 29.0 2.0 39 4-43 109-150 (189)
27 3bl5_A Queuosine biosynthesis 28.3 24 0.00084 28.4 1.9 38 1-42 1-38 (219)
28 3qua_A Putative uncharacterize 27.2 27 0.00093 29.0 2.0 76 4-88 118-196 (199)
29 1ydh_A AT5G11950; structural g 26.3 31 0.0011 29.0 2.2 39 4-43 106-147 (216)
30 1wy5_A TILS, hypothetical UPF0 20.8 60 0.002 28.3 3.0 40 3-43 24-65 (317)
No 1
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=100.00 E-value=1e-60 Score=425.61 Aligned_cols=204 Identities=29% Similarity=0.456 Sum_probs=188.4
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcC--CCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC--
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPK--VRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS-- 78 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~--~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~-- 78 (254)
+++++|+|||||||+.+|+. |++ .++||+||++||+|||+||++|++||+++++++||++++ |+++|||++++.
T Consensus 38 ~~~~~l~LsgGstP~~~y~~-L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~v~-i~~~~i~~~~~~~~ 115 (251)
T 3tx2_A 38 RGKAMIVLTGGGTGIALLKH-LRDVASGLDWTNVHVFWGDDRYVPKTDPERNAWQAWEALLEHVN-FPLRNMHAMPNSES 115 (251)
T ss_dssp HSCEEEEECCSHHHHHHHHH-HHHHHTTSCGGGEEEEESEEESSCTTCTTCHHHHHHHHTGGGSC-CCGGGBCCCCCTTS
T ss_pred CCCEEEEECCCchHHHHHHH-HHhhccCCCCceeEEEeeeeccCCCCChHHHHHHHHHHhhccCC-CCHHHEEECCCccc
Confidence 57899999999999999999 887 789999999999999999999999999999999999999 999999999875
Q ss_pred ---CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEeecCCCCCCCC
Q psy1382 79 ---LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAPIKDSPKPPP 155 (254)
Q Consensus 79 ---~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~~~~~~~~P~ 155 (254)
.+++++|++|+++|++.++. + ...|+||++|||||+||||||||||++.+.++..+++.+.++|++|+
T Consensus 116 ~~~~~~~~~a~~Ye~~i~~~~~~--------~-~~~~~~Dl~lLG~G~DGH~as~fPg~~~~~~~~~~vv~~~~~~~~P~ 186 (251)
T 3tx2_A 116 EYGTDLDAAALAYEQLLAANAEP--------G-QDCPAFDVHLLGMGGEGHINSLFPHTDAVKETQRLVVAVPDSPKPPP 186 (251)
T ss_dssp SCTTCHHHHHHHHHHHHHHTSCT--------T-CSSCCCSEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSS
T ss_pred ccCCCHHHHHHHHHHHHHhhhcc--------c-cCCCCCCEEEECCCCCCceEEcCCcChhhccCcceEEEecCCCCCCC
Confidence 48999999999999986531 0 02468999999999999999999999988777777777888899999
Q ss_pred ceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 156 ERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 156 ~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ++++||+|++||++|
T Consensus 187 ~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h---~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 187 QRITLTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGI---ERTVWLLDEAAASQL 250 (251)
T ss_dssp CEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCS---SEEEEEEETTTTTTC
T ss_pred cEEEECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCCCChHHhccC---CCEEEEEeHHHHhhc
Confidence 99999999999999999999999999999999998 568999999999 899999999999987
No 2
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.3e-60 Score=424.13 Aligned_cols=202 Identities=29% Similarity=0.454 Sum_probs=186.8
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcC--CCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC--
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPK--VRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS-- 78 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~--~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~-- 78 (254)
+++++|+|||||||+.+|+. |++ .++||+||++||+|||+||++|++||+++++++||++++ |+++|||++++.
T Consensus 38 ~~~~~l~LsgGstP~~~y~~-L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~v~-i~~~~i~~~~~~~~ 115 (248)
T 3oc6_A 38 RGQATIVLTGGGTGIGLLKR-VRERSGEIDWSKVHIYWGDERFVPQDDDERNDKQAREALLDHIG-IPPVNVHAMAASDG 115 (248)
T ss_dssp HSCEEEEECCSHHHHHHHHH-HHHTGGGSCGGGEEEEESEEECSCTTCTTCHHHHHHHHTGGGSC-CCGGGBCCCCCTTS
T ss_pred CCCEEEEECCCccHHHHHHH-HHhhccCCCcceEEEEEeeeccCCCCChHHHHHHHHHHhhccCC-CChhhEEecCCccc
Confidence 57899999999999999999 887 589999999999999999999999999999999999999 999999999875
Q ss_pred ---CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEeecCCCCCCCC
Q psy1382 79 ---LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAPIKDSPKPPP 155 (254)
Q Consensus 79 ---~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~~~~~~~~P~ 155 (254)
.+++++|++|+++|++.++ + ..|+||++|||||+||||||||||++.+.++..+++.+.++|++|+
T Consensus 116 ~~~~~~~~~a~~Ye~~i~~~~~---------~--~~~~~Dl~lLG~G~dGH~aslfPg~~~~~~~~~~vv~~~~~~~~P~ 184 (248)
T 3oc6_A 116 EFGDDLEAAAAGYAQLLSANFD---------S--SVPGFDVHLLGMGGEGHVNSLFPDTDAVRETERLVVGVSDSPKPPP 184 (248)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHT---------S--SSCSEEEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSS
T ss_pred ccCCCHHHHHHHHHHHHHHhcc---------c--CCCCCCEEEECCCCCCCEEEcCCCChhhccCcceEEEecCCCCCCC
Confidence 4899999999999997431 0 2358999999999999999999999988877777777888899999
Q ss_pred ceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 156 ERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 156 ~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ++++||+|++||++|
T Consensus 185 ~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h---~~~~~~~D~~Aa~~L 248 (248)
T 3oc6_A 185 RRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGR---ERTVWLVDEAAAAKL 248 (248)
T ss_dssp CEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCS---SEEEEEEETTTTTTC
T ss_pred cEEEcCHHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCCCChHHhccC---CCEEEEEchHHhhCC
Confidence 99999999999999999999999999999999998 668999999999 899999999999876
No 3
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-60 Score=427.64 Aligned_cols=205 Identities=33% Similarity=0.531 Sum_probs=189.6
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcC--CCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC--
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPK--VRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS-- 78 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~--~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~-- 78 (254)
++.++|+|||||||+.+|+. |++ .++||+||++||+|||+||++|++||+++++++||++++ |+++|||++++.
T Consensus 54 ~~~~~l~LsgGstP~~~y~~-L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~Ll~~v~-i~~~~i~~~~~~~~ 131 (268)
T 3ico_A 54 RGQALIVLTGGGNGIALLRY-LSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVD-IPSNQVHPMAASDG 131 (268)
T ss_dssp HSCEEEEECCSHHHHHHHHH-HHHHGGGSCGGGEEEEESEEECSCTTCTTCHHHHHHHHTGGGSC-CCGGGBCCCCCTTS
T ss_pred cCceEEEEecCCchhHHHHH-HHHHhhhhhheeeEEeecccccCCCCcchhHHHHHHHHHHhccC-CcccccccccccCC
Confidence 57899999999999999999 887 689999999999999999999999999999999999999 999999999875
Q ss_pred ---CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEeecCCCCCCCC
Q psy1382 79 ---LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAPIKDSPKPPP 155 (254)
Q Consensus 79 ---~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~~~~~~~~P~ 155 (254)
.+++++|++|++.|++.++. + ...|+||++|||||+||||||||||++.+.+++++++.+.++|++|+
T Consensus 132 ~~~~~~~~~a~~Ye~~i~~~~~~--------~-~~~p~~Dl~lLGmG~DGH~as~fPg~~~~~~t~~~vv~~~~~~~~P~ 202 (268)
T 3ico_A 132 DFGGDLDAAALAYEQVLAASAAP--------G-DPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPP 202 (268)
T ss_dssp TTTTCHHHHHHHHHHHHHHHSST--------T-CSSCCCSEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEESCCSSSSS
T ss_pred CcccchhHHHHHHHHHHhhccCC--------C-CCCCCcceEEeccCCcccccccCCCChhhhhhceEEEEecCCCCCCC
Confidence 58999999999999987521 0 13468999999999999999999999988887777777888889999
Q ss_pred ceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCCC
Q psy1382 156 ERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLIP 221 (254)
Q Consensus 156 ~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~ 221 (254)
+|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ++++||+|++||++|+
T Consensus 203 ~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h---~~~~~~lD~~Aa~~L~ 267 (268)
T 3ico_A 203 RRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGR---QNTLWLLDRDAAAKLP 267 (268)
T ss_dssp CEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCS---SEEEEEEEHHHHTTCC
T ss_pred ceEEEechhhhccceEEEEecCCCchHHHHHHhcCCCCccccccccccc---cceEEEecchhhhhCC
Confidence 99999999999999999999999999999999998 678999999999 9999999999999985
No 4
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=100.00 E-value=5.3e-59 Score=417.67 Aligned_cols=210 Identities=30% Similarity=0.393 Sum_probs=181.4
Q ss_pred CCCCeEEEEcCCchHHHHHHhhCc---CCCCCC-CCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCC
Q psy1382 2 NLPGVLSCQSCGSLIKALAEDILP---KVRTDF-SKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNT 77 (254)
Q Consensus 2 ~~~~~~iaLsgGstp~~ly~~~L~---~~~idw-s~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~ 77 (254)
+++.++|+|||||||+.+|+. |+ +..+|| +||++||+|||+||++|++||+++++++||+ + |+++|||++++
T Consensus 34 ~~~~~~l~LsgGstP~~ly~~-L~~~~~~~idw~~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~--~-i~~~~i~~~~~ 109 (266)
T 3eb9_A 34 QQWPLSIALAGGSTPKMTYAR-LHDEHLNLLREKRALRFFMGDERMVPADSTDSNYNMAREVLLH--D-IPDDLVFPFDT 109 (266)
T ss_dssp GGCSEEEEECCSHHHHHHHHH-HHHHHHHHHTTSCCEEEEESEEESSCTTSTTCHHHHHHHHTGG--G-SCGGGEECCCC
T ss_pred hCCCEEEEEcCCCCHHHHHHH-HHHHhhcCCChHHcEEEEeeeeeccCCCChHHHHHHHHHHhhc--C-CCHHHEEeCCC
Confidence 467999999999999999999 87 347999 9999999999999999999999999999999 6 88999999998
Q ss_pred C-CCH---------HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccC--ceeEe
Q psy1382 78 S-LPV---------EEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKER--SLWVA 145 (254)
Q Consensus 78 ~-~d~---------~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~--~~~v~ 145 (254)
. .++ +++|++|+++|++.++.... .......|+||++|||||+||||||||||++.+.+. +++|.
T Consensus 110 ~~~~~~~~~~~~~~~~~a~~Ye~~i~~~~~~~~~---~g~~~~~p~~Dl~lLGmG~DGH~as~fPg~~~l~~~~~~~~v~ 186 (266)
T 3eb9_A 110 SAVTPSAEATSADAMRVAEAYGKQLASLLPLKSV---GEAGPKVPVFDVVLLGLGSDGHTASIFPGSQAEKETDGKVVVS 186 (266)
T ss_dssp TTCCTTSCCCHHHHHHHHHHHHHHHHHHSCEEET---TTTSCEEECCSEEEECCCTTSCBTTBCTTCSGGGCCSSSCSEE
T ss_pred ccCChhhccccCcHHHHHHHHHHHHHHhcccccc---ccccccCCCCCEEEEccCCCCCeeecCCCCcccccCCCccEEE
Confidence 7 577 99999999999987520000 000001357999999999999999999999987776 67776
Q ss_pred ecCCCC--CCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCccccccc-ccCCCeEEEEEehhhhCCC
Q psy1382 146 PIKDSP--KPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINA-TEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 146 ~~~~~~--~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~-~~~~~~v~~~lD~~Aa~~l 220 (254)
..+++| ++|++|||||+++|++||+|+|+++|++|+++|++++++ ++.+|+|+||. | ++++||+|++||++|
T Consensus 187 ~~~~~~~~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~pAs~l~~~h---~~~~~~~D~~Aa~~L 263 (266)
T 3eb9_A 187 VGFPSETMKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCE---GNVSFLLDKEIAENL 263 (266)
T ss_dssp EECCCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSCSSCCGGGGGGGCS---SEEEEEEEHHHHC--
T ss_pred ecCCCcccCCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCccchhHHhcCCC---CCEEEEEcHHHhccc
Confidence 544377 899999999999999999999999999999999999998 66899999999 8 999999999999998
Q ss_pred C
Q psy1382 221 P 221 (254)
Q Consensus 221 ~ 221 (254)
+
T Consensus 264 ~ 264 (266)
T 3eb9_A 264 A 264 (266)
T ss_dssp -
T ss_pred c
Confidence 5
No 5
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=100.00 E-value=2.4e-56 Score=404.84 Aligned_cols=198 Identities=19% Similarity=0.235 Sum_probs=180.7
Q ss_pred CCeEEEEcCCchHHHHHHhhCcC----CCCCCCCeEEEEcceec-cCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPK----VRTDFSKWKIFFCDERM-VPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS 78 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~----~~idws~v~vf~~DEr~-Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~ 78 (254)
+.++|+|||||||+.+|+. |++ .++||++|++|++|||+ ||++|++||+++++++||++++ |+++|||.+++.
T Consensus 54 ~~~~l~LsgGsTP~~~y~~-L~~~~~~~~idw~~v~~f~~DEr~gvp~~~~~Sn~~~~~~~Ll~~v~-i~~~~i~~~~~~ 131 (289)
T 3hn6_A 54 NPFILGLPTGSSPIGMYKN-LIELNKNKKISFQNVITFNMDEYIGIEENHPESYHSFMWNNFFSHID-IKKENINILNGN 131 (289)
T ss_dssp BCEEEEECCSSTTHHHHHH-HHHHHHTTSCCCTTEEEEESEEESSCCTTSTTSHHHHHHHHTGGGSC-CCGGGEECCCTT
T ss_pred CcEEEEECCCccHHHHHHH-HHHhHhhcCCCchheEEEeCcceecCCCCcHHHHHHHHHHHhhccCC-CCHHHeecCCCC
Confidence 4699999999999999999 876 48999999999999999 9999999999999999999999 999999999985
Q ss_pred -CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEee----------c
Q psy1382 79 -LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAP----------I 147 (254)
Q Consensus 79 -~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~----------~ 147 (254)
.+++++|++|++.|++.+ +||++|||||+||||||||||+++ .+.+++|.. .
T Consensus 132 ~~d~~~~a~~Ye~~i~~~~----------------~~Dl~lLGmG~DGH~asnfPg~~l-~~~t~~v~l~~~t~~~n~~~ 194 (289)
T 3hn6_A 132 ASNLKKECEEYEKKIKSFG----------------GIMLFVGGIGPDGHIAFNEPGSSL-TSRTRIKTLTQDTIIANSRF 194 (289)
T ss_dssp CSSHHHHHHHHHHHHHHTT----------------SCSEEEEECCTTSCBTTBCTTCCT-TCCSEEEECCHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHhhcC----------------CCCEEEEccCCCCceeecCCCCcc-cccceEEeccHHHHHHhhhh
Confidence 699999999999999764 799999999999999999999974 444555431 1
Q ss_pred C--CCCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCCCCC
Q psy1382 148 K--DSPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLIPRN 223 (254)
Q Consensus 148 ~--~~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~~~ 223 (254)
+ +.+++|++|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ++++||+|++||+.|+.+
T Consensus 195 f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~~~~Pas~l~~h---~~~~~~lD~~Aa~~L~~~ 271 (289)
T 3hn6_A 195 FEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLH---KNAIIVSDKNATYELKVG 271 (289)
T ss_dssp TTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGC---SSEEEEEESGGGTTSBHH
T ss_pred ccCCCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCCcccChHHHccC---CCEEEEEcHHHHccccHh
Confidence 2 467899999999999999999999999999999999999998 678999999999 999999999999999653
No 6
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=100.00 E-value=2.7e-55 Score=387.07 Aligned_cols=203 Identities=29% Similarity=0.426 Sum_probs=182.4
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcCCC----CCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPKVR----TDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS 78 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~~~----idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~ 78 (254)
++.++|+|||||||+.+|+. |++.. ++|++|++|++|||+||.+|++||+++++++||++++ ++++|+|++++.
T Consensus 28 ~~~~~l~lsgGstp~~~~~~-L~~~~~~~~~~w~~v~~f~~DEr~vp~~~~~Sn~~~~~~~l~~~~~-~~~~~i~~~~~~ 105 (238)
T 1y89_A 28 GQPVHISLSGGSTPKMLFKL-LASQPYANDIQWKNLHFWWGDERCVAPDDAESNYGEANALLFSKIN-MPAQNIHRILGE 105 (238)
T ss_dssp SSCEEEEECCSHHHHHHHHH-HTSTTHHHHSCGGGEEEEESEEESSCTTSTTCHHHHHHHHTGGGSC-CCGGGBCCCCTT
T ss_pred CCCEEEEECCCccHHHHHHH-HHhhhhccCCChhHeEEEeceecCCCCCCHHHHHHHHHHHhhccCC-CCHHHEEeCCCC
Confidence 56899999999999999999 87754 9999999999999999999999999999999999999 999999999987
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEeecCCCCCCCCceE
Q psy1382 79 LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAPIKDSPKPPPERV 158 (254)
Q Consensus 79 ~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~~~~~~~~P~~ri 158 (254)
.+++++|++|++.|++.++. .+ ..|+||++|||||+||||||||||+ +.++++++..+++++++|++||
T Consensus 106 ~~~~~~~~~y~~~l~~~~~~-------~~--~~~~~Dl~lLGiG~dGH~aslfP~~--l~~~~~~v~~~~~~~~~p~~rI 174 (238)
T 1y89_A 106 NEPQAEAERFAQAMAHVIPT-------EN--GTPVFDWILLGVGADGHTASLFPGQ--TDYADANLSVVASHPESGQLRV 174 (238)
T ss_dssp SCHHHHHHHHHHHHHHHSCE-------ET--TEECCSEEEECCCTTSCBTTBCTTT--CCTTCCSSEEEEECTTTCCEEE
T ss_pred CCHHHHHHHHHHHHHHhhcc-------cC--CCCCCCEEEECCCCCCceeecCCCC--CCCCCcEEEeccCCCCCCCCeE
Confidence 89999999999999987410 00 2347999999999999999999999 5666667666656677899999
Q ss_pred EeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC---CCCCccccccc-ccCCCeEEEEEehhhhCCCC
Q psy1382 159 TITFPVIHKARNIILYLIGAGKADIIKRILVD---CERLPGFYINA-TEPNCNVEWYLDAEAGKLIP 221 (254)
Q Consensus 159 Tlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~---~~~~Pas~l~~-~~~~~~v~~~lD~~Aa~~l~ 221 (254)
|||+++|++||+|+|+++|++|++++++++++ +.++|+|+||. | ++++||+|++||++|.
T Consensus 175 Tltl~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pas~l~~~~---~~~~~~~D~~Aa~~l~ 238 (238)
T 1y89_A 175 SKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTS---GVTEWYLDSDAAAKIA 238 (238)
T ss_dssp EECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSS---SEEEEEEEHHHHTTTC
T ss_pred ECCHHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCccCCHHHHhcCC---CCEEEEEChHHHhhcC
Confidence 99999999999999999999999999999997 46899999999 6 9999999999999873
No 7
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=100.00 E-value=7e-56 Score=397.32 Aligned_cols=210 Identities=26% Similarity=0.375 Sum_probs=183.4
Q ss_pred CCCCeEEEEcCCchHHHHHHhhCcCC---CCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC
Q psy1382 2 NLPGVLSCQSCGSLIKALAEDILPKV---RTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS 78 (254)
Q Consensus 2 ~~~~~~iaLsgGstp~~ly~~~L~~~---~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~ 78 (254)
+++.++|+|||||||+.+|+. |++. .++|++|++||+|||+||++|++||+++++++||++++ ++|+|++++.
T Consensus 35 ~~~~~~l~LsgGstp~~ly~~-L~~~~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~~~---~~~i~~~~~~ 110 (267)
T 3css_A 35 KSVPVVLALSGGSTPKRLYEE-LHEKDLALLQQHAVQFILGDERLLSEDDEQSNFSMATKALLRDVP---SSDVISIDRR 110 (267)
T ss_dssp TTSCEEEEECCSSTTHHHHHH-HHHHSHHHHHTTCEEEEESEEESSCTTSTTSHHHHHHHHTGGGSC---GGGBCCCCCH
T ss_pred hCCCEEEEEeCCCCHHHHHHH-HHHhcccCCChhHeEEEeeeeeccCCCCHHHHHHHHHHHHhccCC---HHHEEeCCCc
Confidence 367899999999999999999 7763 69999999999999999999999999999999999985 6799999876
Q ss_pred C------------CHH-HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEe
Q psy1382 79 L------------PVE-EAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVA 145 (254)
Q Consensus 79 ~------------d~~-~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~ 145 (254)
. +++ ++|++|++.|++.++.. .........|+||++|||||+||||||||||++.+.+++++|.
T Consensus 111 ~~~~~~~~~~~~~~~e~~~a~~Ye~~l~~~~~~~---~~~~~~~~~p~~Dl~lLGiG~dGH~aslfP~~~~L~~~~~~v~ 187 (267)
T 3css_A 111 AALATSKDEKGGLDGAWAVAQDYEVKLLNCLPCK---QINGTAKSVPVVDIVLLGFGSDGHTASIFPDSVAATDEEHVVS 187 (267)
T ss_dssp HHHTTTTCTTTTHHHHHHHHHHHHHHHHHHSCEE---ECTTSSCEEECCSEEEEECCTTSCBTTBCTTSGGGGCCSCSEE
T ss_pred hhccccccccccCChhHHHHHHHHHHHHHhcCcc---ccccccCCCCCCCEEEECCCCCccceeCCCCCcccCCCCcEEE
Confidence 4 788 99999999999864100 0000000245799999999999999999999998888888877
Q ss_pred -ec-CCCCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccc-c-ccCCCeEEEEEehhhhCC
Q psy1382 146 -PI-KDSPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYIN-A-TEPNCNVEWYLDAEAGKL 219 (254)
Q Consensus 146 -~~-~~~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~-~-~~~~~~v~~~lD~~Aa~~ 219 (254)
.+ .++|++|++|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+|| . | ++++||+|++||+.
T Consensus 188 ~~~~~~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g~~~~~~Pas~l~~~~h---~~~~~~~D~~Aa~~ 264 (267)
T 3css_A 188 VSFPSPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCR---GSVTLLLDPGAGEG 264 (267)
T ss_dssp EECCCTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSCCSSCCGGGGGGGCS---SEEEEEECTTTTTT
T ss_pred eecccCCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcCCCCCcCCHHHhccCCC---CCEEEEECHHHHhh
Confidence 77 5778999999999999999999999999999999999999998 5689999999 7 7 99999999999998
Q ss_pred CC
Q psy1382 220 IP 221 (254)
Q Consensus 220 l~ 221 (254)
|.
T Consensus 265 l~ 266 (267)
T 3css_A 265 VC 266 (267)
T ss_dssp TC
T ss_pred cc
Confidence 74
No 8
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=100.00 E-value=2.7e-55 Score=385.29 Aligned_cols=189 Identities=24% Similarity=0.337 Sum_probs=170.8
Q ss_pred CCCCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC-CC
Q psy1382 2 NLPGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS-LP 80 (254)
Q Consensus 2 ~~~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~-~d 80 (254)
++++++|+|||||||+.+|+. |++..+||+||++||+|||+||++|++||+++++++||++ . ++++|+|++++. .+
T Consensus 31 ~~~~~~l~LsgGstp~~~y~~-L~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~-~-~~~~~~~~~~~~~~~ 107 (226)
T 3lwd_A 31 KRERALLVVSGGSTPKPFFTS-LAAKALPWARVDVTLADERWVTADDADSNARLVRETLLVG-P-AAEACFHPLTTDDDT 107 (226)
T ss_dssp TSSCEEEEECCSSTTHHHHHH-HHTSCSCGGGEEEEESEEESSCTTSTTCHHHHHHHHTSSG-G-GGGSEEECSCCSSSS
T ss_pred hCCCEEEEEcCCCCHHHHHHH-HHhcCCCchhEEEEEeeecccCCCChHHHHHHHHHHhcCC-C-CcHHhEecCCCCcCC
Confidence 478999999999999999999 8888999999999999999999999999999999999999 6 899999999875 69
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCcc---CceeEeecCCCCCCCCce
Q psy1382 81 VEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKE---RSLWVAPIKDSPKPPPER 157 (254)
Q Consensus 81 ~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~---~~~~v~~~~~~~~~P~~r 157 (254)
++++|++|++.|++.+ |+||++|||||+||||||||||++.+++ ...++..+ +.+++|++|
T Consensus 108 ~~~~~~~ye~~i~~~~---------------~~~Dl~lLG~G~dGH~as~fPg~~~L~~~~~~~~~~~~~-~~~~~P~~r 171 (226)
T 3lwd_A 108 PEAGVETVAERLESLP---------------WPASAVILGMGGDGHTASLFPDSEQLATALETTSAAVVV-HAPSVPQAR 171 (226)
T ss_dssp HHHHHHHHHHHHHTSC---------------SSBSEEEECCCTTSCBTTBCTTCTTHHHHHHCCSSEEEE-CCTTSSSCE
T ss_pred HHHHHHHHHHHHHhcC---------------CCCCEEEECcCCCCCeeecCCCChhhhhhhccCCeEEec-CCCCCCCcE
Confidence 9999999999999653 3899999999999999999999987754 33444433 467899999
Q ss_pred EEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEE
Q psy1382 158 VTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWY 211 (254)
Q Consensus 158 iTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~ 211 (254)
||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ..+++|-
T Consensus 172 iTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h--~~~v~w~ 225 (226)
T 3lwd_A 172 ITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQ--PIATYWA 225 (226)
T ss_dssp EEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTS--CCEEEEE
T ss_pred EEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCcCChHHHhcC--CCeEEeC
Confidence 999999999999999999999999999999998 578999999998 5677773
No 9
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=100.00 E-value=4.7e-54 Score=378.64 Aligned_cols=188 Identities=27% Similarity=0.507 Sum_probs=174.4
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCCHH
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLPVE 82 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d~~ 82 (254)
++.++|+|||||||..+|+. |++..+||++|++||+|||+||++|++||+++++++||++++ ++++|+|++++..+++
T Consensus 44 ~~~~~l~LsgGsTp~~ly~~-L~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~~~~~l~~~v~-i~~~~i~~~~~~~~~e 121 (232)
T 1vl1_A 44 KDKIFVVLAGGRTPLPVYEK-LAEQKFPWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAK-IPSGNVHYVDTSLPIE 121 (232)
T ss_dssp CSCEEEEECCSTTHHHHHHH-HTTSCCCGGGEEEEESEEESSCTTSTTCHHHHHHHHTTTTSC-CCGGGEECCCTTSCHH
T ss_pred CCCeEEEEcCCccHHHHHHH-HHHcCCChhHEEEEeCeEeecCCCChHHHHHHHHHHHhccCC-CCHHHEecCCCCCCHH
Confidence 57899999999999999999 888789999999999999999999999999999999999999 9999999999888999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCC-CCCCCccCceeEeecCCCCCCCCceEEeC
Q psy1382 83 EAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFP-DHPLLKERSLWVAPIKDSPKPPPERVTIT 161 (254)
Q Consensus 83 ~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfP-g~~~l~~~~~~v~~~~~~~~~P~~riTlt 161 (254)
++|++|++.|++.. |+||++|||||+||||||||| |++.+.+++++|. +++++|++|||||
T Consensus 122 ~~~~~y~~~i~~~~---------------~~~Dl~lLGiG~dGH~aslfP~g~~~l~~~~~~v~---~~~~~p~~rITlt 183 (232)
T 1vl1_A 122 KACEKYEREIRSAT---------------DQFDLAILGMGPDGHVASIFDLETGNKDNLVTFTD---PSGDPKVPRVTLT 183 (232)
T ss_dssp HHHHHHHHHHHHHC---------------SSCSEEEECCCTTSCBTTBCSHHHHTCSSSEEECS---SBTTTTBCEEEEC
T ss_pred HHHHHHHHHHHhcC---------------CCCCEEEEecCCCCchhhccCCCCcccccCCcEEe---cCCCCCCCEEECC
Confidence 99999999999622 379999999999999999999 9887666666554 5678999999999
Q ss_pred HHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEeh
Q psy1382 162 FPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDA 214 (254)
Q Consensus 162 ~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~ 214 (254)
+++|++||+|+|+++|++|+++++++++++ .+|||+||.| ++++||+|+
T Consensus 184 l~~I~~A~~iilla~G~~Ka~av~~~l~g~-~~Pas~l~~h---~~~~~~~D~ 232 (232)
T 1vl1_A 184 FRALNTSLYVLFLIRGKEKINRLTEILKDT-PLPAYFVRGK---EKTVWFVGK 232 (232)
T ss_dssp HHHHTTCSEEEEEEESHHHHHHHHHHHTTC-CCGGGGCCCS---SEEEEEEEC
T ss_pred HHHHHhCCEEEEEEcCHHHHHHHHHHHhCC-CCChHHhCcC---CCEEEEeCC
Confidence 999999999999999999999999999983 5999999998 999999995
No 10
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=100.00 E-value=1.7e-53 Score=375.38 Aligned_cols=189 Identities=25% Similarity=0.328 Sum_probs=165.1
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC-CCH
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS-LPV 81 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~-~d~ 81 (254)
++.++|+|||||||+.+|+. |++..+||+||++||+|||+||++|++||+++++++||++++ + ++++|++++. .++
T Consensus 36 ~~~~~l~lsgGstp~~~y~~-L~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~~~-~-~~~~~~~~~~~~~~ 112 (233)
T 3nwp_A 36 RGKASLVVSGGSTPLKLFQL-LSMKSIDWSDVYITLADERWVEADADASNERLVREHLLQNRA-S-NAKFRGLKNMFSTA 112 (233)
T ss_dssp HSCEEEEECCSSTTHHHHHH-HHHCCSCGGGEEEEESEEESSCTTSTTCHHHHHHHHTSSGGG-G-GSEECCSCCSSSSH
T ss_pred CCCEEEEEcCCCCHHHHHHH-HHhcCCChhHeEEEeCeecccCCCChHHHHHHHHHHhhccCC-c-cceEEcCCCCCCCH
Confidence 57899999999999999999 888899999999999999999999999999999999999997 4 6788887654 699
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccC---ceeEeecCCCCCCCCceE
Q psy1382 82 EEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKER---SLWVAPIKDSPKPPPERV 158 (254)
Q Consensus 82 ~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~---~~~v~~~~~~~~~P~~ri 158 (254)
+++|++|++.|++.+ ++||++|||||+||||||||||++.+.+. ..+++.+ +.+++|++||
T Consensus 113 ~~~~~~ye~~i~~~~---------------~~~Dl~lLG~G~dGHias~fPg~~~L~~~~~~~~~~~~~-~~~~~P~~ri 176 (233)
T 3nwp_A 113 EAGADMAAESLSNFP---------------RPFDVVVLGMGNDGHTCSWFPCSAELENALTTQALCVAT-NPTTAPHGRI 176 (233)
T ss_dssp HHHHHHHHHHTTTSC---------------SSBSEEEECCCTTSCBTTBCTTCTTHHHHHHCCSSEEEE-CCSSSSSCEE
T ss_pred HHHHHHHHHHHHhcC---------------CCCCEEEEccCCCCCeeecCCCCchhhhhcccCceEEEC-CCCCCCCceE
Confidence 999999999998542 28999999999999999999999865431 2244433 3578899999
Q ss_pred EeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccc-cCCCeEEE
Q psy1382 159 TITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINAT-EPNCNVEW 210 (254)
Q Consensus 159 Tlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~-~~~~~v~~ 210 (254)
|||+++|++||+|+|+++|++|+++|++++++ +.++|+|+|+.| ..+.+|+|
T Consensus 177 Tlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~v~w 231 (233)
T 3nwp_A 177 TLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRKTPVDVFW 231 (233)
T ss_dssp EECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSSSCEEEEE
T ss_pred ECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCCccHHHHHhCCCCCcEEEe
Confidence 99999999999999999999999999999998 678999999988 22235666
No 11
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=100.00 E-value=2.4e-53 Score=373.96 Aligned_cols=188 Identities=23% Similarity=0.377 Sum_probs=164.2
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCC-CCCH
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNT-SLPV 81 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~-~~d~ 81 (254)
++.++|+|||||||+.+|+. |++..+||+||++|++|||+||++|++||+++++++||++++ + +++++++.+ ..++
T Consensus 33 ~~~~~l~lsgGstp~~~y~~-L~~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~~~-~-~~~~~p~~~~~~~~ 109 (232)
T 3lhi_A 33 KGGAVLAVSGGRSPIAFFNA-LSQKDLDWKNVGITLADERIVPTNHADSNTGLVREYLLKNKA-A-AAVWIPMVEDGKTE 109 (232)
T ss_dssp HSCEEEEECCSSTTHHHHHH-HHTSCCCGGGEEEEESEEESSCTTSTTCHHHHHHHHTSSGGG-G-GSEECCSSCTTCCG
T ss_pred CCCEEEEEeCCCCHHHHHHH-HHhcCCCchheEEEEeeeccCCCCChHHHHHHHHHHhccCCC-c-cceEecCCCCCCCh
Confidence 57899999999999999999 888899999999999999999999999999999999999987 4 567777754 4688
Q ss_pred H--HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccC-----ceeEeecCCCCCCC
Q psy1382 82 E--EAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKER-----SLWVAPIKDSPKPP 154 (254)
Q Consensus 82 ~--~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~-----~~~v~~~~~~~~~P 154 (254)
+ ++|++|++.|++.+ +||++|||||+||||||||||++.+.+. ..++... +.+++|
T Consensus 110 ~~~~~~~~ye~~i~~~~----------------~~Dl~lLG~G~dGH~as~fPg~~~l~~~~~~~~~~~~~~~-~~~~~P 172 (232)
T 3lhi_A 110 TELHPDAVVDYALKHYK----------------QPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGVALVHT-TPVTAP 172 (232)
T ss_dssp GGCCHHHHHHHHHHHCC----------------CCSEEEECCCTTSCBTTBCTTCTTHHHHHCCTTCCCEEEE-CCSSSS
T ss_pred hhHHHHHHHHHHHhhCC----------------CCCEEEEccCCCCCeeecCCCChhhhhhhccccCcEEEeC-CCCCCC
Confidence 8 99999999998653 8999999999999999999999987542 2234332 467889
Q ss_pred CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC-CCCCcccccccc-cCCCeEEE
Q psy1382 155 PERVTITFPVIHKARNIILYLIGAGKADIIKRILVD-CERLPGFYINAT-EPNCNVEW 210 (254)
Q Consensus 155 ~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~-~~~~Pas~l~~~-~~~~~v~~ 210 (254)
++|||||+++|++||+|+|+++|++|+++|++++++ +.++|+|+||.| ....+|+|
T Consensus 173 ~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~Pas~l~~h~~~~~~v~w 230 (232)
T 3lhi_A 173 HERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVLNHQGVNCHVFY 230 (232)
T ss_dssp SCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTSCCTTSTHHHHHTSTTCCEEEEE
T ss_pred CceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhCCCccCcHHHHHhCCCCCcEEEe
Confidence 999999999999999999999999999999999999 779999999998 22235555
No 12
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=100.00 E-value=5.7e-52 Score=379.08 Aligned_cols=198 Identities=24% Similarity=0.343 Sum_probs=171.6
Q ss_pred CCCCeEEEEcCCchHHHHHHhhCcC---CCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCC-CcEEcCCC
Q psy1382 2 NLPGVLSCQSCGSLIKALAEDILPK---VRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTE-ESFVPVNT 77 (254)
Q Consensus 2 ~~~~~~iaLsgGstp~~ly~~~L~~---~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~-~~v~~~~~ 77 (254)
+++.++|+|||||||+.+|+. |+. ..+||++|++||+|||+||++|++||+++++ .||++++ |++ +|+|.+++
T Consensus 58 ~~~~~~l~LsgGsTP~~ly~~-L~~~~~~~idw~~V~~f~~DEr~vp~d~~~Sn~~~~~-~l~~~v~-i~~~~~i~~~~g 134 (312)
T 3e15_A 58 EGGHVVIGLSGGKTPIDVYKN-IALVKDIKIDTSKLIFFIIDERYKRDDHKFSNYNNIK-FLFESLK-INEKEQLYRPDT 134 (312)
T ss_dssp TTCCCEEEECCSHHHHHHHHH-HTTCCSSCCCGGGCEEEESEEECCTTCCTTCHHHHHH-HHHHHTT-CCHHHHEECCCT
T ss_pred hCCCEEEEEeCCCCHHHHHHH-HHHhhccCCCccceEEEEeeeecCCCCChHHHHHHHH-HHHhcCC-CCccccEEcCCC
Confidence 457899999999999999999 765 3799999999999999999999999999996 8999999 987 79999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCC------------CccCce---
Q psy1382 78 SLPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPL------------LKERSL--- 142 (254)
Q Consensus 78 ~~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~------------l~~~~~--- 142 (254)
..+++++|++|++.|++.+. ..|+|||+|||||+||||||||||+++ +.++++
T Consensus 135 ~~d~~~~a~~Ye~~I~~~~~------------~~g~~DL~LLGiG~DGHiaslfPg~~~~~~~~~~~~t~~l~e~t~~~~ 202 (312)
T 3e15_A 135 SKNIVECVRDYNEKIKNMVK------------KYTKVDIAILGMGSDFHIASLFPNIFFNIYMNNYQNSYIYDESSIKVA 202 (312)
T ss_dssp TSCHHHHHHHHHHHHHHHHH------------HHCSCCEEEECCCTTSCBTTBCSSHHHHHHHHHTGGGSSSCGGGCCCC
T ss_pred CcCHHHHHHHHHHHHHHHHh------------hcCCCcEEEEccCCCCceeecCCCCcccccccccccceeecHHHHHHh
Confidence 88999999999999974321 124899999999999999999999863 222322
Q ss_pred ----------------eEeecCCCCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHh-C--CC---CCcccccc
Q psy1382 143 ----------------WVAPIKDSPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILV-D--CE---RLPGFYIN 200 (254)
Q Consensus 143 ----------------~v~~~~~~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~-~--~~---~~Pas~l~ 200 (254)
++....+++++|++|||||+++|++||+|+|+++|++|+++|+++|+ + +. .+|||+||
T Consensus 203 ~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq 282 (312)
T 3e15_A 203 NSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLI 282 (312)
T ss_dssp C---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHH
T ss_pred hcccccccccccccccceeeccCCCCCCCeEEEecHHHHhcCCeEEEEEcChHHHHHHHHHHHhCCCCCCcCccchHHHh
Confidence 12222356778899999999999999999999999999999999999 7 55 89999999
Q ss_pred cccCCCeEEEEEehhhh
Q psy1382 201 ATEPNCNVEWYLDAEAG 217 (254)
Q Consensus 201 ~~~~~~~v~~~lD~~Aa 217 (254)
.| +++++++|+.+.
T Consensus 283 ~H---p~~~vv~~~~~~ 296 (312)
T 3e15_A 283 DS---MNTTVVTCGYTN 296 (312)
T ss_dssp HT---SCEEEEEESCTT
T ss_pred hC---CCEEEEEcCCcc
Confidence 99 999999998763
No 13
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=100.00 E-value=1.3e-47 Score=346.98 Aligned_cols=197 Identities=19% Similarity=0.225 Sum_probs=176.1
Q ss_pred CCeEEEEcCCchHHHHHHhhCcC----CCCCCCCeEEEEcceec-cCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPK----VRTDFSKWKIFFCDERM-VPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS 78 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~----~~idws~v~vf~~DEr~-Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~ 78 (254)
+.++|+||||+||..+|+. |.+ ..++|++|++|++|||+ ||++|++||+++++++|+++++ ++++++|.+++.
T Consensus 33 ~~~~lglsgGsTp~~~~~~-L~~~~~~~~i~~~~v~v~~lDEr~gv~~~~~~Sn~~~~~~~l~~~~~-~~~~~i~~p~~~ 110 (289)
T 1ne7_A 33 KYFTLGLPTGSTPLGCYKK-LIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHID-IHPENTHILDGN 110 (289)
T ss_dssp BCEEEEECCSHHHHHHHHH-HHHHHHTTSCCCTTEEEEESEEETTSCTTSTTSHHHHHHHHTGGGSC-CCGGGEECCCTT
T ss_pred CCEEEEEcCCccHHHHHHH-HHhhhhccCCCchheEEEeCceeecCCCCcHHHHHHHHHHHhhccCC-CCHHHEecCCCC
Confidence 4589999999999999999 774 37999999999999999 9999999999999999999999 999999999864
Q ss_pred -CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEe----------ec
Q psy1382 79 -LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVA----------PI 147 (254)
Q Consensus 79 -~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~----------~~ 147 (254)
.+++++|++|++.|++.+ +||++|||||+|||+||||||+++. +.+.++. .+
T Consensus 111 ~~~~e~~~~~ye~~i~~~~----------------~~Dl~lLGiG~dGH~aslfPg~~l~-~~~~~~~L~~~~~~~~~~~ 173 (289)
T 1ne7_A 111 AVDLQAECDAFEEKIKAAG----------------GIELFVGGIGPDGHIAFNEPGSSLV-SRTRVKTLAMDTILANARF 173 (289)
T ss_dssp CSSHHHHHHHHHHHHHHTT----------------SCSEEEECCCTTCCSTTCCTTCCTT-CCSEEEECCHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHhcC----------------CCCEEEEccCCCCcceecCCCCCCc-cccceEEcchhhhhhhhcc
Confidence 589999999999999753 7999999999999999999998763 3333332 12
Q ss_pred C--CCCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCCCC
Q psy1382 148 K--DSPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLIPR 222 (254)
Q Consensus 148 ~--~~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~~ 222 (254)
+ +.+.+|++|||||+++|++|++|+++++|++|++++++++.+ +.++|+|+||.| ++++||+|++||+.|..
T Consensus 174 f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~~~~Pas~l~~h---~~~~li~D~~aA~~L~~ 249 (289)
T 1ne7_A 174 FDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQH---PRTVFVCDEDATLELKV 249 (289)
T ss_dssp TTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGC---SSEEEEEEGGGGTTSBH
T ss_pred ccCCCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCCccCchHHHccC---CCEEEEEcHHHHhhccc
Confidence 2 346789999999999999999999999999999999999998 568999999998 89999999999999953
No 14
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=100.00 E-value=1.8e-47 Score=336.14 Aligned_cols=198 Identities=21% Similarity=0.258 Sum_probs=175.1
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcC----CCCCCCCeEEEEcceec-cCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCC
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPK----VRTDFSKWKIFFCDERM-VPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNT 77 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~----~~idws~v~vf~~DEr~-Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~ 77 (254)
++.++|+||||+||..+|+. |.+ ..++|++|+||++|||+ ||.+|++||+++++++|+++++ ++..++|.+++
T Consensus 27 ~~~~~i~lsgG~T~~~~~~~-L~~~~~~~~~~~~~v~v~~lder~gv~~~~~~sn~~~~~~~l~~~~~-~~~~~i~~p~~ 104 (242)
T 2bkx_A 27 KPDAVLGLATGGTPEGTYRQ-LIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHID-SKPSRHFIPNG 104 (242)
T ss_dssp CTTCEEEECCSSTTHHHHHH-HHHHHHHSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTGGGSC-CCGGGEECCCT
T ss_pred CCCeEEEECCCCCHHHHHHH-HHHHhhccCCChhheEEEeCccccCCCCCchHHHHHHHHHHHhccCC-CCHHHEEcCCC
Confidence 46789999999999999999 874 37999999999999999 9999999999999999999999 99999999986
Q ss_pred -CCCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCc--------eeE-eec
Q psy1382 78 -SLPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERS--------LWV-API 147 (254)
Q Consensus 78 -~~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~--------~~v-~~~ 147 (254)
..+++++|++|++.|+... +||++|||||+|||+||||||+++.+++. .++ ..+
T Consensus 105 ~~~~~~~~~~~y~~~i~~~~----------------~~Dl~llGiG~dgh~a~l~p~~~~~~~~~~~~L~~~~~~~~~~~ 168 (242)
T 2bkx_A 105 NADDLEAECRRYEQLVDSLG----------------DTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARY 168 (242)
T ss_dssp TCSCHHHHHHHHHHHHHHTT----------------SCSEEEECCCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHhcC----------------CCCEEEECcCCCCcceeCCCCCccccCceEEeCCHHHHHHHhhh
Confidence 4789999999999999643 79999999999999999999987654321 111 112
Q ss_pred CC-CCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCCC
Q psy1382 148 KD-SPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLIP 221 (254)
Q Consensus 148 ~~-~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~ 221 (254)
++ .+++|.+|||||++.|++|++++++++|++|+++++++|.+ +.++|+|+|+.| ++++||+|++||+.|+
T Consensus 169 ~~~~~~~p~~~itltl~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~---~~~~~~~D~~Aa~~l~ 242 (242)
T 2bkx_A 169 FPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLH---SDVTVLIDREAASLRP 242 (242)
T ss_dssp SSSGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGC---SSEEEEEETTTTTTCC
T ss_pred cCCCCCCCCccEEcCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCcccHHHhccC---CCEEEEEchHHhccCC
Confidence 33 35678899999999999999999999999999999999998 568999999998 9999999999999873
No 15
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=100.00 E-value=4.7e-46 Score=332.02 Aligned_cols=198 Identities=17% Similarity=0.220 Sum_probs=175.6
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcC----CCCCCCCeEEEEcceec-cCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCC
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPK----VRTDFSKWKIFFCDERM-VPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNT 77 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~----~~idws~v~vf~~DEr~-Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~ 77 (254)
++.++|+||||+||..+|+. |.+ ..++|++|+||++|||+ ||.+|++||+++++++|+++++ ++..++|.+++
T Consensus 32 ~~~~~i~lsgGsTp~~~~~~-L~~~~~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~~~~l~~~~~-~~~~~i~~p~~ 109 (266)
T 1fs5_A 32 DRPFVLGLPTGGTPMTTYKA-LVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVD-IPAENINLLNG 109 (266)
T ss_dssp SSCEEEEECCSSTTHHHHHH-HHHHHHTTSCCCTTEEEEESEEESSCCTTSTTSHHHHHHHHTGGGSC-CCGGGEECCCT
T ss_pred cCceEEEEcCCCCHHHHHHH-HHHHhhcCCCChHHeEEEeCeeccCCCCCCHHHHHHHHHHHhhccCC-CCHHHEEeCCC
Confidence 45899999999999999999 775 36999999999999999 9999999999999999999999 99999999986
Q ss_pred C-CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEe----------e
Q psy1382 78 S-LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVA----------P 146 (254)
Q Consensus 78 ~-~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~----------~ 146 (254)
. .+++++|++|++.|+... +||++|||||+|||+||||||+++.. .+.++. .
T Consensus 110 ~~~~~e~~~~~y~~~l~~~~----------------~~Dl~llGiG~dGh~asl~pg~~~~~-~~~~~~l~~~~~~~~~~ 172 (266)
T 1fs5_A 110 NAPDIDAECRQYEEKIRSYG----------------KIHLFMGGVGNDGHIAFNEPASSLAS-RTRIKTLTHDTRVANSR 172 (266)
T ss_dssp TCSSHHHHHHHHHHHHHHHC----------------CCSEEEECCCTTCCSTTCCSSCCTTC-CSEEEECCHHHHHHHGG
T ss_pred CCCCHHHHHHHHHHHHHhcC----------------CCCEEEEccCCCCCeeecCCCCCCCc-cccEEEechhhhhhhhc
Confidence 5 589999999999999764 79999999999999999999987643 333332 1
Q ss_pred cC--CCCCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCCCC
Q psy1382 147 IK--DSPKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLIPR 222 (254)
Q Consensus 147 ~~--~~~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~~ 222 (254)
++ +.+.+|+.+||||++.|++|++++++++|++|++++++++.+ +.++|+|+||.| ++++||+|++||+.|+.
T Consensus 173 ~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~---~~~~li~D~~aA~~L~~ 249 (266)
T 1fs5_A 173 FFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLH---PKAIMVCDEPSTMELKV 249 (266)
T ss_dssp GTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGC---SSEEEEECSGGGTTSBH
T ss_pred cccCCcCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCCCcCChHHHccC---CCEEEEEeHHHhhhccc
Confidence 12 335567888999999999999999999999999999999998 568999999998 89999999999999953
No 16
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=100.00 E-value=5e-45 Score=319.31 Aligned_cols=191 Identities=20% Similarity=0.274 Sum_probs=166.7
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceec-cCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCC-CCCH
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERM-VPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNT-SLPV 81 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~-Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~-~~d~ 81 (254)
+. +|+||||+||..+|+. |.+..++|++|+||++|||+ ||.+|++||+++++++|+++++ ++.. |.+.+ ..++
T Consensus 29 ~~-~i~ls~G~T~~~~~~~-L~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~~~~l~~~~~-~~~~--~~~~~~~~~~ 103 (234)
T 2ri0_A 29 AK-TLGLATGSTPLELYKE-IRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKP-FKKS--YLPNGLAADL 103 (234)
T ss_dssp CC-EEEECCSSTTHHHHHH-HHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTTTTSC-CSEE--ECCCTTCSCH
T ss_pred CC-EEEEcCCCCHHHHHHH-HHhcCCChhheEEEeCeeecCCCCCChHHHHHHHHHHHhccCC-CcHh--hcCCCCCCCH
Confidence 45 9999999999999999 88767999999999999998 9999999999999999999998 7666 44433 3588
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCccCceeEee----------cCCC-
Q psy1382 82 EEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKERSLWVAP----------IKDS- 150 (254)
Q Consensus 82 ~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~~~~~v~~----------~~~~- 150 (254)
+++++.|++.|++ . +||++|||||+|||+||||||+++.. .+.++.. +++.
T Consensus 104 ~~~~~~y~~~i~~-~----------------~~Dl~llGiG~dgh~a~l~p~~~~~~-~~~~~~l~~~~~~~~~~~fd~~ 165 (234)
T 2ri0_A 104 AKETEYYDQILAQ-Y----------------PIDLQILGIGRNAHIGFNEPGTAFSS-QTHLVDLTPSTIAANSRFFEKA 165 (234)
T ss_dssp HHHHHHHHHHHHH-S----------------CCSEEEECCCTTSCBTTBCTTCCTTC-CSEEEECCHHHHHHHHTTCSCG
T ss_pred HHHHHHHHHHHHh-C----------------CCCEEEEccCCCCCchhcCCCCCCCC-CceEEECCHHHHHHhhhhcCCc
Confidence 9999999999997 3 79999999999999999999997543 3333321 1233
Q ss_pred CCCCCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC--CCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 151 PKPPPERVTITFPVIHKARNIILYLIGAGKADIIKRILVD--CERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 151 ~~~P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~--~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+.+|.+|||||++.|+++++++++++|++|+++++++|.+ +.++|+|+|+.| ++++||+|++||+.|
T Consensus 166 ~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~---~~~~~~~D~~Aa~~l 234 (234)
T 2ri0_A 166 EDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTH---PKVILIVDEKAGAGI 234 (234)
T ss_dssp GGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGC---SSEEEEEETTTTTTC
T ss_pred cCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCccchHHHhhC---CCEEEEEchHHhccC
Confidence 3478899999999999999999999999999999999998 568999999998 899999999999865
No 17
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.87 E-value=3.8e-22 Score=177.99 Aligned_cols=179 Identities=10% Similarity=-0.012 Sum_probs=128.1
Q ss_pred CCeEEEEc-CCchHHHHHHhhCcCCCCCCC-CeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCC---
Q psy1382 4 PGVLSCQS-CGSLIKALAEDILPKVRTDFS-KWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTS--- 78 (254)
Q Consensus 4 ~~~~iaLs-gGstp~~ly~~~L~~~~idws-~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~--- 78 (254)
+..+|+|+ +|+||..+|+. |..... |+ +++|+++|| -++ +|++|+.++|.+.|+++++ +...++|.+...
T Consensus 57 ~~~viGla~~G~T~~~~~~~-l~~~~~-~~~~v~~v~L~g-gl~-~~~~~~~~~~~~~la~~~~-~~~~~l~~P~~~~~~ 131 (264)
T 2r5f_A 57 AQDHIGISSWSSTIRAMVSH-MHPQPG-KQSAQEVVQLLG-GVG-NKGAFEATLLTQRLATLLN-CPAFLLPSQSIEQSV 131 (264)
T ss_dssp TTCEEEECTTCHHHHHHHHT-CCC--C-CCCCSEEEECEE-CCC---CHHHHHHHHHHHHHHHT-SCEECCCCC------
T ss_pred CCCEEEECcchHHHHHHHHh-hccccC-CCCCcEEEECCC-CCC-CccccCHHHHHHHHHHHhC-CeeEEeeCCcccCCH
Confidence 46789999 99999999999 886543 67 999999999 457 8999999999999999998 777777766542
Q ss_pred --CCHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCC---cceeecCCCCCCCcc--------Cce---
Q psy1382 79 --LPVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPD---GHTCSLFPDHPLLKE--------RSL--- 142 (254)
Q Consensus 79 --~d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~D---GHiAslfPg~~~l~~--------~~~--- 142 (254)
.+...+++.|++.|+... +.|++|+|||.+ ||+ ++ ||+ +.++ .+.
T Consensus 132 ~~~~~~~~~~~~~~~l~~~~----------------~~Di~l~GIG~~~~~~~i-~~-~g~-~~~~~~~~~L~~~~avgd 192 (264)
T 2r5f_A 132 ESKQRIVEMEEVKEVLHRFD----------------SITLAIVGIGELEPSQLL-RN-SGN-YYTEDMLRVLAERGAVGD 192 (264)
T ss_dssp ----CCHHHHHHHHHHHHTT----------------TCCEEEECCEECC----------------------CTTTTCCEE
T ss_pred HHHHHHHcChHHHHHHHHHh----------------cCCEEEEecCCCCCCccH-hh-cCC-CCCHHHHHHHHHCCcEEE
Confidence 244578999999998654 789999999987 999 77 884 3322 111
Q ss_pred eEeecCC-C-CCCC----CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhh
Q psy1382 143 WVAPIKD-S-PKPP----PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEA 216 (254)
Q Consensus 143 ~v~~~~~-~-~~~P----~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~A 216 (254)
.+..+++ . ..+| .+.|||++..|+++++++++|.|++|+++++.+|.+ . -..++++|++|
T Consensus 193 ~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g--~------------~~~~LItDe~a 258 (264)
T 2r5f_A 193 ICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLG--G------------YLDVLITDVGT 258 (264)
T ss_dssp ETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHT--T------------CCSEEEEEHHH
T ss_pred eEhhhhccCCCCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhc--C------------CCCEEEECHHH
Confidence 1123343 2 3456 789999999999999999999999999999999998 1 12378999999
Q ss_pred hCCC
Q psy1382 217 GKLI 220 (254)
Q Consensus 217 a~~l 220 (254)
|+.|
T Consensus 259 A~~L 262 (264)
T 2r5f_A 259 ARGL 262 (264)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9765
No 18
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.85 E-value=2e-22 Score=178.99 Aligned_cols=178 Identities=12% Similarity=0.025 Sum_probs=140.5
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCC----
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSL---- 79 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~---- 79 (254)
+..+|+|++|+||..+|+. |.. .++|++++||++|+- ++. |++|+.++|.+.|+++++ ++..++|.++...
T Consensus 56 ~~~viGla~G~T~~~~~~~-l~~-~~~~~~v~~v~L~gg-l~~-~~~~~~~~~~~~la~~~~-~~~~~l~~P~~~~~~~~ 130 (255)
T 2okg_A 56 GKNIVAVTGGTTIEAVAEM-MTP-DSKNRELLFVPARGG-LGE-DVKNQANTICAHMAEKAS-GTYRLLFVPGQLSQGAY 130 (255)
T ss_dssp SEEEEEECCSHHHHHHHHH-CCC-CTTCCEEEEEESEEE-CC----CCHHHHHHHHHHHHHT-CEECCCCCCCSCCHHHH
T ss_pred CCCEEEECCcHHHHHHHHh-hcc-ccCCCCCEEEECCCC-CCC-CcccCHHHHHHHHHHHHC-CeeEEEeccccCCHHHH
Confidence 5678999999999999999 865 368999999999974 566 899999999999999999 8888888877653
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCcc--------Cce---eEeecC
Q psy1382 80 PVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKE--------RSL---WVAPIK 148 (254)
Q Consensus 80 d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~--------~~~---~v~~~~ 148 (254)
+...+++.|++.|+... +.|++++|||.+||++ .||. .++ .+. .+..++
T Consensus 131 ~~l~~~~~~~~~l~~~~----------------~~Di~l~GIG~~~~i~--~~g~--~~~~~~~~L~~~~avg~~~~rff 190 (255)
T 2okg_A 131 SSIIEEPSVKEVLNTIK----------------SASMLVHGIGEAKTMA--QRRN--TPLEDLKKIDDNDAVTEAFGYYF 190 (255)
T ss_dssp HHHHTSHHHHHHHHHHH----------------TCSEEEECCEEHHHHH--HHTT--CCHHHHHHHHHTTEEEEETTEEE
T ss_pred HHHHcChHHHHHHHHHh----------------cCCEEEEecCCchhhh--hcCC--CCHHHHHHHHHCCeEEEeehhhh
Confidence 22256889999998654 6899999999999997 7872 221 111 112333
Q ss_pred C-C-CCCC-CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 149 D-S-PKPP-PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 149 ~-~-~~~P-~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+ . ..+| .+.|||++..|+++++++++|.|++|+++++.+|.+ . ...++++|++||+.|
T Consensus 191 d~~G~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g--~------------~~~~LItDe~aA~~L 251 (255)
T 2okg_A 191 NADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKK--P------------RNTVLVTDEGAAKKL 251 (255)
T ss_dssp ETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTS--C------------CCEEEEEEHHHHHHH
T ss_pred ccCCCCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHHhC--C------------CCCEEEECHHHHHHH
Confidence 3 2 2355 789999999999999999999999999999999998 1 134889999999775
No 19
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=99.82 E-value=1.1e-20 Score=168.76 Aligned_cols=182 Identities=11% Similarity=0.009 Sum_probs=144.0
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCC----
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSL---- 79 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~---- 79 (254)
+..+|+|++|+||..+|+. |.. .+|++++|+++|+ -++.+|++|+.++|.+.|+++++ +...++|.+....
T Consensus 57 ~~~viGla~G~T~~~~~~~-l~~--~~~~~v~~v~L~g-gl~~~~~~~~~~~~~~~la~~~~-~~~~~l~~P~~~~~~~~ 131 (266)
T 2gnp_A 57 DNMKIGFSWGKSLSNLVDL-IHS--KSVRNVHFYPLAG-GPSHIHAKYHVNTLIYEMSRKFH-GECTFMNATIVQENKLL 131 (266)
T ss_dssp TTCEEEECCSHHHHHHHHH-CCC--CCCSSCEEEESBC-CCTTSCGGGSHHHHHHHHHHHHT-CEECCCCSCSBCSSHHH
T ss_pred CCCEEEECChHHHHHHHHh-ccc--cCCCCCEEEECCC-CCCCCccccCHHHHHHHHHHHhC-CeeEEEeCCcccCCHHH
Confidence 5678999999999999999 876 5899999999997 46888999999999999999998 7788887776543
Q ss_pred -CHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecC-CCCCC------CccCce---eEeecC
Q psy1382 80 -PVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLF-PDHPL------LKERSL---WVAPIK 148 (254)
Q Consensus 80 -d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslf-Pg~~~------l~~~~~---~v~~~~ 148 (254)
+...+++.|++.|+... +.|++|+|||.+||-++++ ||..- +.+.+. .+..++
T Consensus 132 ~~~~~~~~~~~~~l~~~~----------------~~Di~l~GIG~~~~~~~~~~~g~~s~~~~~~L~~~~avgd~~~rff 195 (266)
T 2gnp_A 132 ADGILQSRYFENLKNSWK----------------DLDIAVVGIGDFSNKGKHQWLDMLTEDDFKELTKVKTVGEICCRFF 195 (266)
T ss_dssp HHHHHTSTTTHHHHHHTT----------------SCSEEEECCEECSHHHHHTTTTTSCHHHHHHHHHTTCCEEETTEEE
T ss_pred HHHHHcCHHHHHHHHHHH----------------hCCEEEEecCCCCCCCcchhcCCCCHHHHHHHHHCCeEEEEEchhh
Confidence 45567888999998654 7899999999999855553 44110 111111 122344
Q ss_pred C-C-CCCC----CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 149 D-S-PKPP----PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 149 ~-~-~~~P----~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+ . ..+| .+.|||++..|+++++++++|.|++|+++++.+|.+ . ...++++|++||+.|
T Consensus 196 d~~G~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g--~------------~~~~LItDe~aA~~L 259 (266)
T 2gnp_A 196 DSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRA--N------------LVNHLITDKNTILKV 259 (266)
T ss_dssp CTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHT--T------------CCSEEEEEHHHHHHH
T ss_pred ccCCCCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhc--C------------CCCEEEECHHHHHHH
Confidence 3 2 3567 899999999999999999999999999999999998 1 123789999999876
No 20
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=99.78 E-value=3.7e-20 Score=170.63 Aligned_cols=179 Identities=9% Similarity=0.004 Sum_probs=141.3
Q ss_pred CeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCC----
Q psy1382 5 GVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLP---- 80 (254)
Q Consensus 5 ~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d---- 80 (254)
..+|+|++|+||..+|+. |....++|+++++|.+|+ -++. |++||..++.+.|+++++ +...++|.+....+
T Consensus 143 ~~~igl~~GsT~~~~~~~-L~~~~~~~~~v~vv~l~g-gl~~-~~~~~~~~i~~~la~~~~-~~~~~l~~P~~~~~~~~~ 218 (345)
T 2o0m_A 143 ENTIAVMGGTTMAMVAEN-MGSLETEKRHNLFVPARG-GIGE-AVSVQANSISAVMANKTG-GNYRALYVPEQLSRETYN 218 (345)
T ss_dssp EEEEEECCSHHHHHHHHT-CCCCCCSSEEEEEEESBS-CCCC-CGGGSHHHHHHHHHHHHT-CEECCCCCCSSCCHHHHH
T ss_pred CCEEEECCcHHHHHHHHH-hhhccCCCCCcEEEEcCC-cCCC-CcccCHHHHHHHHHHHhC-CceEEEeccccCCHHHHH
Confidence 578999999999999999 876446889999999998 4566 899999999999999988 76777766655431
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCcc--------Cc---eeEeecCC
Q psy1382 81 VEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKE--------RS---LWVAPIKD 149 (254)
Q Consensus 81 ~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~--------~~---~~v~~~~~ 149 (254)
...++..|++.|+... ++|++++|||.+||++ .||. .++ .+ ..+..+++
T Consensus 219 ~l~~~~~~~~~l~~~~----------------~~DiailGIG~~~~i~--~~g~--~~~~~~~~L~~~~avg~~~~~ffd 278 (345)
T 2o0m_A 219 SLLQEPSIQEVLTLIS----------------HANCVVHSIGRALHMA--ARRK--MSDDEMVMLKQKNAVAESFGYFFD 278 (345)
T ss_dssp HHHTCHHHHHHHHHHH----------------TCSEEEECCEEHHHHH--HHTT--CCHHHHHHHHHTTCCEEETTEEEC
T ss_pred HHHhChHHHHHHHHHH----------------cCCEEEEccCCchhhh--hcCC--CCHHHHHHHHHCCeEEEeeccccc
Confidence 2245789999998754 7899999999999987 7772 221 11 11223443
Q ss_pred C--CCCC-CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhC-CCCCcccccccccCCCeEEEEEehhhhCCCC
Q psy1382 150 S--PKPP-PERVTITFPVIHKARNIILYLIGAGKADIIKRILVD-CERLPGFYINATEPNCNVEWYLDAEAGKLIP 221 (254)
Q Consensus 150 ~--~~~P-~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~-~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l~ 221 (254)
. ..+| .+.|||++..|+++++++++|.|++|+++++.++.+ . ..+++++|++||+.|.
T Consensus 279 ~~g~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~--------------~~~~LitDe~aA~~ll 340 (345)
T 2o0m_A 279 EEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAP--------------KQTWLITDEAAANEIL 340 (345)
T ss_dssp TTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSC--------------TTCEEEEEHHHHHHHT
T ss_pred cCCCCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCC--------------CCeEEEECHHHHHHHH
Confidence 2 2345 679999999999999999999999999999999987 2 2368999999998764
No 21
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=99.77 E-value=3.2e-19 Score=162.19 Aligned_cols=181 Identities=14% Similarity=0.057 Sum_probs=138.4
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccC-CCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCC---
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVP-YDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSL--- 79 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp-~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~--- 79 (254)
+..+|+|++|+|+..+|+. |.... +|++++|+.+|. -++ .+|++||..++.+.|+++++ +...++|.+....
T Consensus 109 ~~~~igl~~GsT~~~~~~~-L~~~~-~~~~~~vv~l~g-gl~~~~~~~~~~~~i~~~la~~~~-~~~~~l~~P~~~~~~~ 184 (315)
T 2w48_A 109 PGDIIGFSWGRAVRSLVEN-LPQRS-QSRQVICVPIIG-GPSGKLESRYHVNTLTYGAAARLK-AESHLADFPALLDNPL 184 (315)
T ss_dssp TTCEEEECCSHHHHHHHTT-SCCCS-SCCCCEEEESBC-BCTTSSCGGGCHHHHHHHHHHHTT-CEECCCCSBSBCSSHH
T ss_pred CCCEEEECChHHHHHHHHh-hcccc-CCCCcEEEEcCC-CCCCCCccccCHHHHHHHHHHHHC-CceeEeeCCcccCCHH
Confidence 5668999999999999999 86532 788999999995 356 78999999999999999988 6666666554432
Q ss_pred --CHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCC-CCCCCc--------cCce---eEe
Q psy1382 80 --PVEEAAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFP-DHPLLK--------ERSL---WVA 145 (254)
Q Consensus 80 --d~~~~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfP-g~~~l~--------~~~~---~v~ 145 (254)
+...++..|++.|+... ++|++++||| ||++++-| ++++.+ +.+. .+.
T Consensus 185 ~~~~l~~~~~~~~~l~~~~----------------~~DiailGIG--g~~~~~g~~~~~~~~~~~~~~L~~~~avg~~~~ 246 (315)
T 2w48_A 185 IRNGIMQSQHFKTISSYWD----------------SLDVALVGIG--SPAIRDGANWHAFYGSEESDDLNARHVAGDICS 246 (315)
T ss_dssp HHHHHHHSHHHHHHHHHHT----------------TCSEEEECCB--CTTCCSSSCHHHHHCTHHHHHHHHTTEEEEETT
T ss_pred HHHHHHhChHHHHHHHHHh----------------cCCEEEEccC--cchhhcCccccccCCHHHHHHHHHCCcEEEEEC
Confidence 22356789999998764 7899999999 99999854 001221 1111 112
Q ss_pred ecCC-C-CCCC----CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhhhCC
Q psy1382 146 PIKD-S-PKPP----PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEAGKL 219 (254)
Q Consensus 146 ~~~~-~-~~~P----~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~ 219 (254)
.+++ . ..+| .+.|||++..|+++++++++|.|++|+++++.+|.+ . ...++++|++||+.
T Consensus 247 rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g--~------------~~~~LitDe~aA~~ 312 (315)
T 2w48_A 247 RFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHG--R------------YINCLVTNRETAEL 312 (315)
T ss_dssp EEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHT--T------------SCSEEEEEHHHHHH
T ss_pred ceECCCCCEeCCccccceecCCHHHHhCCCCEEEEecChHhHHHHHHHHhC--C------------CCCEEEECHHHHHH
Confidence 3333 2 3456 789999999999999999999999999999999998 1 12378999999976
Q ss_pred C
Q psy1382 220 I 220 (254)
Q Consensus 220 l 220 (254)
|
T Consensus 313 l 313 (315)
T 2w48_A 313 L 313 (315)
T ss_dssp H
T ss_pred H
Confidence 5
No 22
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=99.49 E-value=1.4e-13 Score=122.85 Aligned_cols=179 Identities=10% Similarity=0.069 Sum_probs=125.7
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCch-hHHHHHHHHhccCCCCCCCCcEEcCCCCCCHH
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPE-STFGVYKKLLLGKFPGLTEESFVPVNTSLPVE 82 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~-Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d~~ 82 (254)
+.-+|++++|+|+..+++. |.. .+++++.|+.+++ -++.+++. ++...+...|.++++ .....+|.+....+.+
T Consensus 56 ~~~viGv~wG~T~~~v~~~-l~~--~~~~~~~vV~l~G-g~~~~~~~~~~~n~i~~~lA~~~~-~~~~~l~~P~~~~s~~ 130 (267)
T 3nze_A 56 SNAIIGVAWGATLSAVSRH-LTR--KMTHDSIVVQLNG-AGNMQTTGITYASDIMRRFGSAYG-ARVEQFPVPAFFDHAS 130 (267)
T ss_dssp SSCEEEECCSHHHHHHHHT-CCC--CCCSSCEEEECSC-CCCTTSCSHHHHHHHHHHHHHHHT-CEEECCCSCSSCSSHH
T ss_pred CCCEEEECCCHHHHHHHHh-cCc--cCCCCCEEEECCC-CCCCCccccccHHHHHHHHHHHhC-CeEEEeeCCEEcCCHH
Confidence 4578999999999999999 764 4688999999999 44555665 555678888888888 5444555544433333
Q ss_pred H-----HHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCC-----cc--------Cc---
Q psy1382 83 E-----AAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLL-----KE--------RS--- 141 (254)
Q Consensus 83 ~-----~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l-----~~--------~~--- 141 (254)
. ....|++.|+... +.|++|+|||..+| +|++... ++ ..
T Consensus 131 ~~~~l~~~~~i~~~l~~~~----------------~~Diai~GIG~~~~----~~~s~~~~~g~~s~~~~~~L~~~gaVG 190 (267)
T 3nze_A 131 TKTAMWNERSVQRILDLQA----------------RMSIAIFGVGSVDS----DYPSHVYAGGYLDEHDLTMLAADDVVG 190 (267)
T ss_dssp HHHHHTTCHHHHHHHHHHH----------------TCSEEEECCEECC---------CCCTTSCCCHHHHHHHHHTTEEE
T ss_pred HHHHHHhChHHHHHHHHHh----------------cCCEEEEecCCCCC----CCCChHHHcCCCCHHHHHHHHHCCcEE
Confidence 1 2367777777543 78999999999997 3443332 11 11
Q ss_pred eeEeecCCCC-CC-----CCceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehh
Q psy1382 142 LWVAPIKDSP-KP-----PPERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAE 215 (254)
Q Consensus 142 ~~v~~~~~~~-~~-----P~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~ 215 (254)
..+..+++.. .. +.+.|+|++..|+++++++++|.|++|+++++.+|.+ . --.+++.|++
T Consensus 191 di~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g---------~-----~~~~LITDe~ 256 (267)
T 3nze_A 191 DVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAA---------G-----LATDLILDEA 256 (267)
T ss_dssp EETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHT---------T-----CCSEEEEEHH
T ss_pred EEecccccCCCCCCCcchhcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhc---------C-----CCCEEEeCHH
Confidence 0112333322 22 2678999999999999999999999999999999997 1 1236799999
Q ss_pred hhCCCC
Q psy1382 216 AGKLIP 221 (254)
Q Consensus 216 Aa~~l~ 221 (254)
+|..|.
T Consensus 257 tA~~lL 262 (267)
T 3nze_A 257 SARRLV 262 (267)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998763
No 23
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=99.19 E-value=3.8e-11 Score=106.84 Aligned_cols=182 Identities=13% Similarity=0.013 Sum_probs=122.2
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCC-CCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCCHH
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDF-SKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLPVE 82 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idw-s~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d~~ 82 (254)
+.-+|++++|+|+..+++. |... +. .++.|+.+.--....+++.++...+...|-++++ .....+|.+....+++
T Consensus 60 ~~~vIGv~wG~Tl~~v~~~-l~~~--~~~~~~~~V~l~Gg~~~~~~~~~~~n~i~~~lA~~~~-~~~~~l~aP~~~~~~~ 135 (266)
T 3efb_A 60 PGDIVGFSWGRAVSALVEN-LPQA--GQSRQLICVPIIGGPSGKLESRYHVNTLTYSAAAKLK-GESHLADFPALLDNPL 135 (266)
T ss_dssp TTCEEEECCSHHHHHHHHT-CCCC--SSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTT-CEECCCCSBSBCSSHH
T ss_pred CCCEEEEcccHHHHHHHHh-cCcc--CCCCCeEEEEcCCCCCCCCccccCHHHHHHHHHHHhC-CeEEEEeCCeecCCHH
Confidence 4568999999999999999 7643 32 3688899888654456777777778888888887 5455555554444443
Q ss_pred H-----HHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCCCCcc--------Cc---eeEee
Q psy1382 83 E-----AAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHPLLKE--------RS---LWVAP 146 (254)
Q Consensus 83 ~-----~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~~l~~--------~~---~~v~~ 146 (254)
. ....|++.++... ..|++++|||....-.+++-. .++++ .. ..+..
T Consensus 136 ~~~~l~~~~~i~~vl~~~~----------------~aDiai~GIG~~~~~~~~~~~-g~~s~~~~~~L~~~gaVGdi~~~ 198 (266)
T 3efb_A 136 IRNGIMQSQHFKTISAYWD----------------NLDIALVGIGSPAIRDGANWH-AFYGGEESDDLNARQVAGDICSR 198 (266)
T ss_dssp HHHHHHTSHHHHHHHHHHH----------------TCSEEEECCBCCC----------CSCHHHHHHHHHTTCCEEETTE
T ss_pred HHHHHHhChHHHHHHHHHh----------------cCCEEEEecCCCCCCchhHHh-cCCCHHHHHHHHHCCcEEEEecc
Confidence 1 2366777776442 689999999997432222110 11221 11 11223
Q ss_pred cCCCC-C-CC----CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 147 IKDSP-K-PP----PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 147 ~~~~~-~-~P----~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+++.. . ++ .+.|+|++..|+++++++++|.|++|+++++.+|.+ . --.+++.|+++|..|
T Consensus 199 ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g---------~-----~~~~LITDe~tA~~l 264 (266)
T 3efb_A 199 FFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRG---------K-----YINCLVTNSSTAELL 264 (266)
T ss_dssp EECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHT---------T-----SCSEEEEEHHHHHHH
T ss_pred cccCCCCCCCcchhcceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhc---------C-----CCCEEEeCHHHHHHH
Confidence 34432 2 22 379999999999999999999999999999999997 1 123678999988754
No 24
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=99.10 E-value=4.7e-11 Score=106.37 Aligned_cols=182 Identities=9% Similarity=-0.034 Sum_probs=121.8
Q ss_pred CCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCCHHH
Q psy1382 4 PGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLPVEE 83 (254)
Q Consensus 4 ~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d~~~ 83 (254)
+.-+|++++|+|+..+++. |.. .++.++.|+.+.- -++.++++++...+...|-++++ .....+|.+....+++.
T Consensus 55 ~~~vIGv~wG~Tl~~v~~~-l~~--~~~~~~~~V~l~G-G~~~~~~~~~~~~i~~~lA~~~~-~~~~~l~~P~~~~~~~~ 129 (267)
T 3kv1_A 55 EGMAVAVGQGQNVAAVADH-AGI--VTQRNARFVSAIG-GTHRSGDIINADHICRRLAKKYG-GSSETLYAPAYVNDPSL 129 (267)
T ss_dssp TTCEEEECCSHHHHHHHHC-CCC--CCCCCCEEEESBC-BCC----CCCHHHHHHHHHHHHT-CEEECCCSBSBCSSHHH
T ss_pred CCCEEEECchHHHHHHHHh-ccc--cCCCCCEEEeCCC-CCCCCccccCHHHHHHHHHHHhC-CeEEEEecCcccCCHHH
Confidence 4568999999999999999 764 4668899999887 34556667777788888888887 43333443333334331
Q ss_pred -----HHHHHHHHHHhcCCCCCCCCCCCCCCCCCceeEEEecccCCcceeecCCCCC-------CC-cc-Cc-eeE-e-e
Q psy1382 84 -----AAKDYEQTIRSHFPYEFKDPLPPGQAHWPRFDSLLLGLGPDGHTCSLFPDHP-------LL-KE-RS-LWV-A-P 146 (254)
Q Consensus 84 -----~a~~Ye~~I~~~~~~~~~~~~~~~~~~~p~fDl~lLGiG~DGHiAslfPg~~-------~l-~~-~~-~~v-~-~ 146 (254)
....|++.++... ..|++++|||..+.-.+++-..- .+ .+ .. ..+ . .
T Consensus 130 ~~~l~~~~~i~~vl~~~~----------------~aDiai~GIG~~~~~s~l~~~g~~~~~~~~~L~~~~gaVGdi~g~r 193 (267)
T 3kv1_A 130 RSAFMEHATIKETLSQAR----------------KAEFALVGIGDMDENSHMVKLGFFTPKEFVEARLNDGIVGDIGGFD 193 (267)
T ss_dssp HHHHHTSHHHHHHHHHHH----------------TCSEEEEEEEEHHHHTHHHHTTSSCHHHHHHHHHTTCEEEEETTTE
T ss_pred HHHHHhChHHHHHHHHHH----------------hCCEEEEeCCCCCCccHHHHhCCCCHHHHHHHHHhcCCEEEEcchH
Confidence 2356777776542 68999999999874222221110 11 11 11 111 2 2
Q ss_pred cCCCC-C-CC----CceEEeCHHHHHhcCcEEEEEcCccHHHHHHHHHhCCCCCcccccccccCCCeEEEEEehhhhCCC
Q psy1382 147 IKDSP-K-PP----PERVTITFPVIHKARNIILYLIGAGKADIIKRILVDCERLPGFYINATEPNCNVEWYLDAEAGKLI 220 (254)
Q Consensus 147 ~~~~~-~-~P----~~riTlt~~~i~~Ak~vill~~G~~Ka~al~~~l~~~~~~Pas~l~~~~~~~~v~~~lD~~Aa~~l 220 (254)
+++.. . ++ .+.|+|++..|+++++++++|.|++|+++++.+|.+ . --.+++.|+++|..|
T Consensus 194 ffD~~G~~v~~~~~~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~---------~-----~~~~LITDe~tA~~l 259 (267)
T 3kv1_A 194 FFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRT---------G-----VIDVLATSVSCAMAL 259 (267)
T ss_dssp EEETTSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHT---------S-----CCSEEEEEHHHHHHH
T ss_pred hhcCCCCEeccccccceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhc---------C-----CCCEEEeCHHHHHHH
Confidence 44432 2 22 368999999999999999999999999999999997 1 123679999999876
No 25
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=47.41 E-value=27 Score=28.61 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=43.3
Q ss_pred CCeEEEEcCCc-hHHHHHHhhCc--CCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCC
Q psy1382 4 PGVLSCQSCGS-LIKALAEDILP--KVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLP 80 (254)
Q Consensus 4 ~~~~iaLsgGs-tp~~ly~~~L~--~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d 80 (254)
....|+|+||. |-..+++. +. +.......|.++..+.+| +.-..+++ ++.+.-- |.++....+.-..+
T Consensus 98 sda~IvlPGG~GTl~El~e~-lt~~q~g~~~kPvvll~~~g~~------~~l~~~l~-~~~~~Gf-i~~~~~~~~~~~~~ 168 (191)
T 1t35_A 98 ADGFISMPGGFGTYEELFEV-LCWAQIGIHQKPIGLYNVNGYF------EPMMKMVK-YSIQEGF-SNESHLKLIHSSSR 168 (191)
T ss_dssp CSEEEECSCCHHHHHHHHHH-HHTTSCSSCCCCEEEECGGGTT------HHHHHHHH-HHHHTTS-SCTTHHHHEEEESS
T ss_pred CCEEEEeCCCccHHHHHHHH-HHHHHhCCCCCCEEEecCCccc------chHHHHHH-HHHHCCC-CCHHHcCeEEEeCC
Confidence 35789999996 77788887 43 333334678888888887 33344443 3333211 44444333333346
Q ss_pred HHHHHHHH
Q psy1382 81 VEEAAKDY 88 (254)
Q Consensus 81 ~~~~a~~Y 88 (254)
+++..+..
T Consensus 169 ~~e~~~~l 176 (191)
T 1t35_A 169 PDELIEQM 176 (191)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 26
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=28.45 E-value=25 Score=29.00 Aligned_cols=39 Identities=5% Similarity=-0.071 Sum_probs=28.0
Q ss_pred CCeEEEEcCCc-hHHHHHHhhCc--CCCCCCCCeEEEEcceec
Q psy1382 4 PGVLSCQSCGS-LIKALAEDILP--KVRTDFSKWKIFFCDERM 43 (254)
Q Consensus 4 ~~~~iaLsgGs-tp~~ly~~~L~--~~~idws~v~vf~~DEr~ 43 (254)
....|+|+||. |-..+++. +. +....-+.|.+++.+.||
T Consensus 109 sda~IalPGG~GTLdElfe~-lt~~qlg~~~kPvvlln~~gfw 150 (189)
T 3sbx_A 109 ANAFITLPGGVGTLDELLDV-WTEGYLGMHDKSIVVLDPWGHF 150 (189)
T ss_dssp CSEEEECSCCHHHHHHHHHH-HHHHHTTSCCCCEEEECTTCTT
T ss_pred CCEEEEeCCCcchHHHHHHH-HHHHHhcccCCCEEEecCCccc
Confidence 36789999995 88888877 43 333334578888888887
No 27
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=28.29 E-value=24 Score=28.43 Aligned_cols=38 Identities=11% Similarity=-0.163 Sum_probs=24.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHhhCcCCCCCCCCeEEEEccee
Q psy1382 1 MNLPGVLSCQSCGSLIKALAEDILPKVRTDFSKWKIFFCDER 42 (254)
Q Consensus 1 ~~~~~~~iaLsgGstp~~ly~~~L~~~~idws~v~vf~~DEr 42 (254)
|+++++.+++|||-.-..+... +.+.. .++..+.+|..
T Consensus 1 m~~~~v~v~lSGG~DS~~ll~l-l~~~~---~~v~~~~~~~~ 38 (219)
T 3bl5_A 1 MKKEKAIVVFSGGQDSTTCLLW-ALKEF---EEVETVTFHYN 38 (219)
T ss_dssp --CCEEEEECCSSHHHHHHHHH-HHHHC---SEEEEEEEESS
T ss_pred CCCCCEEEEccCcHHHHHHHHH-HHHcC---CceEEEEEeCC
Confidence 7888999999999654444444 44322 46778888754
No 28
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=27.21 E-value=27 Score=29.04 Aligned_cols=76 Identities=8% Similarity=-0.027 Sum_probs=43.1
Q ss_pred CCeEEEEcCCc-hHHHHHHhhCc--CCCCCCCCeEEEEcceeccCCCCchhHHHHHHHHhccCCCCCCCCcEEcCCCCCC
Q psy1382 4 PGVLSCQSCGS-LIKALAEDILP--KVRTDFSKWKIFFCDERMVPYDHPESTFGVYKKLLLGKFPGLTEESFVPVNTSLP 80 (254)
Q Consensus 4 ~~~~iaLsgGs-tp~~ly~~~L~--~~~idws~v~vf~~DEr~Vp~d~~~Sn~~~~~~~ll~~~~~i~~~~v~~~~~~~d 80 (254)
..+.|+|+||. |-..+++. +. +....-+.|.++..+.+| +.-..+++ ++.+.-- |.++....+.-..|
T Consensus 118 sda~IalPGG~GTldEl~e~-lt~~qlg~~~kPvvlln~~gfw------~~l~~~l~-~~~~~Gf-i~~~~~~~i~~~d~ 188 (199)
T 3qua_A 118 SDAFIALPGGIGTLEEFFEA-WTAGYLGMHDKPLILLDPFGHY------DGLLTWLR-GLVPTGY-VSQRAMDSLVVVDN 188 (199)
T ss_dssp CSEEEECSCCHHHHHHHHHH-HHHHHTTSCCCCEEEECTTSTT------HHHHHHHH-HTTTTTS-SCHHHHHTSEEESS
T ss_pred cCccEEeCCCccHHHHHHHH-HHHHHhccCCCCEEEEcCCccc------hHHHHHHH-HHHHCCC-CCHHHCCeEEEeCC
Confidence 36789999995 77788876 44 333334567788887777 44444554 3433221 33333333333346
Q ss_pred HHHHHHHH
Q psy1382 81 VEEAAKDY 88 (254)
Q Consensus 81 ~~~~a~~Y 88 (254)
+++..+..
T Consensus 189 ~~e~~~~l 196 (199)
T 3qua_A 189 VEAALEAC 196 (199)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76655443
No 29
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.30 E-value=31 Score=28.97 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=27.8
Q ss_pred CCeEEEEcCCc-hHHHHHHhhCc--CCCCCCCCeEEEEcceec
Q psy1382 4 PGVLSCQSCGS-LIKALAEDILP--KVRTDFSKWKIFFCDERM 43 (254)
Q Consensus 4 ~~~~iaLsgGs-tp~~ly~~~L~--~~~idws~v~vf~~DEr~ 43 (254)
....|+|+||. |-..+++. |. +..+....|.++..+.||
T Consensus 106 sda~I~lpGG~GTLdElfE~-lt~~qlg~~~kPvvll~~~gfw 147 (216)
T 1ydh_A 106 AEAFIALPGGYGTMEELLEM-ITWSQLGIHKKTVGLLNVDGYY 147 (216)
T ss_dssp CSEEEECSCSHHHHHHHHHH-HHHHHHTSCCCEEEEECGGGTT
T ss_pred CCEEEEeCCCccHHHHHHHH-HHHHHhcccCCCEEEecCCccc
Confidence 35789999996 77778876 43 223455668788888887
No 30
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=20.78 E-value=60 Score=28.30 Aligned_cols=40 Identities=18% Similarity=0.072 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCchHHHHHHhhCcCC--CCCCCCeEEEEcceec
Q psy1382 3 LPGVLSCQSCGSLIKALAEDILPKV--RTDFSKWKIFFCDERM 43 (254)
Q Consensus 3 ~~~~~iaLsgGstp~~ly~~~L~~~--~idws~v~vf~~DEr~ 43 (254)
++++.||+|||..-..+... +.+. ...++++..+.+|.-.
T Consensus 24 ~~~vlva~SGG~DS~~Ll~l-l~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 24 ERRVLIAFSGGVDSVVLTDV-LLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CCEEEEECCSSHHHHHHHHH-HHHSTTTTTCSEEEEEEEECCS
T ss_pred CCEEEEEecchHHHHHHHHH-HHHHHHHcCCCEEEEEEEECCC
Confidence 45789999999766666555 5443 3456558888998654
Done!