RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13820
(487 letters)
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 172 bits (435), Expect = 1e-51
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 169 EDFREVTIYFSDIVGFTTIS----AYSTPFEVVDLLNDLYTCFDATINA---YNVYKVET 221
+ + V + F+ I F E + LLN++ FD ++ V K++T
Sbjct: 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61
Query: 222 IGDAYMVVGGL-----------PVRIPDHADQIATMALDLLHHSGRFKIRHLPYTPLRLR 270
IG YM GL P R H + A L+ +LR
Sbjct: 62 IGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFN--DFKLR 119
Query: 271 IGLHTGPCCAGVVGLTMPRYCLFGDTVNTASRLESTGAPWRIHLSADTKAKLDQVGDYQL 330
+G++ GP AGV+G P+Y ++G+TVN ASR++STG +I ++ +T L +G Y
Sbjct: 120 VGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLG-YTC 178
Query: 331 EYRGETELKGKGKMPTYWL 349
RG +KGKG + TY++
Sbjct: 179 TCRGIINVKGKGDLKTYFV 197
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
{Trypanosome (Trypanosoma brucei), different isoform
[TaxId: 5691]}
Length = 235
Score = 150 bits (378), Expect = 7e-43
Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 32/217 (14%)
Query: 168 PEDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYM 227
E VT+ F+DI T + A + P + D + + + I Y Y+V+T+GD++M
Sbjct: 7 KEPTDPVTLIFTDIESSTALWA-AHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFM 65
Query: 228 VVGGLPVRIPDHADQIATMALDLLHHSGRF---------------------------KIR 260
+ P A ++ L + ++
Sbjct: 66 IASKSPFAAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVY 125
Query: 261 HLPYTPLRLRIGLHTGPCCAGVVGLTMPRYCLFGDTVNTASRLESTGAPWRIHLSADTKA 320
+ LR+R+G+HTG C +T Y +G T N A+R ES ++ ++
Sbjct: 126 SRLWNGLRVRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVANGGQVLMTHAAYM 184
Query: 321 KL--DQVGDYQLEYRGETELKGKG-KMPTYWLLGKKG 354
L + + G+ L+G + Y L
Sbjct: 185 SLSAEDRKQIDVTALGDVALRGVSDPVKMYQLNTVPS 221
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
familiaris) [TaxId: 9615]}
Length = 190
Score = 135 bits (341), Expect = 4e-38
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 169 EDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYMV 228
+ V+I F+DI GFT++++ T E+V LN+L+ FD + +++ +GD Y
Sbjct: 10 QKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYC 69
Query: 229 VGGLPVRIPDHADQIATMALDLLHHSGRFKIRHLPYTPLRLRIGLHTGPCCAGVVGLTMP 288
V GLP DHA M +D++ + +R+G+H+G GV+GL
Sbjct: 70 VSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNV--NMRVGIHSGRVHCGVLGLRKW 127
Query: 289 RYCLFGDTVNTASRLESTGAPWRIHLSADTKAKLDQVGDYQLEYRGETELKGK-GKMPTY 347
++ ++ + V A+ +E+ G RIH++ T + L+ + + GE K + T+
Sbjct: 128 QFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEVEPGCGGERNAYLKEHSIETF 187
Query: 348 WLL 350
+L
Sbjct: 188 LIL 190
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
[TaxId: 118562]}
Length = 197
Score = 133 bits (334), Expect = 5e-37
Identities = 53/194 (27%), Positives = 77/194 (39%), Gaps = 16/194 (8%)
Query: 168 PEDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYM 227
PE R +TI FSDIVGFT +S V +LLN+ + + +GDA M
Sbjct: 3 PEP-RLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIM 61
Query: 228 VVGGLPVRIPDHADQIATMALDL----------LHHSGRFKIRHLPYTPLRLRIGLHTGP 277
+ G P + +A R + P+R R G+H G
Sbjct: 62 ALYGAPEEMSPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGM 121
Query: 278 CCAGVVG-LTMPRYCLFGDTVNTASRLESTGAPWRIHLSADTKAKLDQVGDYQLEYRGET 336
G+ G + G +VN A+RL+ AP I +SA V D ++ R
Sbjct: 122 AVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMVSAMVA---QYVPDEEIIKREFL 178
Query: 337 ELKGKGK-MPTYWL 349
ELKG + + T +
Sbjct: 179 ELKGIDEPVMTCVI 192
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET
{Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 32.1 bits (72), Expect = 0.14
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTLNQGRGRGHLLLLSLRYKN 43
M +CW +MRP F+E+ + H + ++ Y N
Sbjct: 267 MLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 309
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 287
Score = 31.6 bits (71), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTLNQ 27
MR CW P RP F E++ F+T+ Q
Sbjct: 249 MRACWQWNPSDRPSFAEIHQAFETMFQ 275
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 31.0 bits (69), Expect = 0.27
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTL 25
+ C + D +PD++ + LF+ L
Sbjct: 252 LNFCRSLRFDDKPDYSYLRQLFRNL 276
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 293
Score = 30.9 bits (69), Expect = 0.27
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTL 25
M D PD++ + LF +
Sbjct: 252 MHYARNLAFDATPDYDYLQGLFSKV 276
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 31.0 bits (69), Expect = 0.28
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTLNQGRG 30
MR+CW R + L+Q G
Sbjct: 271 MRECWYANGAARLTALRIKKTLSQLSQQEG 300
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 30.5 bits (68), Expect = 0.37
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 1 MRQCWAEPPDMRPDFNEV-----NDLFKTLNQG 28
M CW + RP F V N + +N+G
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 275
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 29.3 bits (65), Expect = 0.94
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M CW + RPDF V
Sbjct: 245 MSDCWIYKWEDRPDFLTV 262
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 29.3 bits (65), Expect = 0.95
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFK 23
M QCWA P+ RP F + D
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFLL 270
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 301
Score = 29.0 bits (64), Expect = 1.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTL 25
MR CW++ P RP F ++ + + +
Sbjct: 275 MRLCWSKLPADRPSFCSIHRILQRM 299
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 28.9 bits (64), Expect = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
MR CW E P+ RP F+ +
Sbjct: 243 MRLCWKERPEDRPTFDYL 260
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 317
Score = 29.0 bits (64), Expect = 1.3
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 13/68 (19%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTLNQGRGRGHLLLLSLRYKNPHLGLRLKSLLYIDSPR 60
M +CW D RP F E+ F + R +L ++ +++ SP
Sbjct: 246 MVKCWMIDADSRPKFRELIIEFSKM-------------ARDPQRYLVIQGDERMHLPSPT 292
Query: 61 KVNFVDTM 68
NF +
Sbjct: 293 DSNFYRAL 300
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 262
Score = 28.4 bits (63), Expect = 1.5
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTL 25
M+ CW MRP F ++ + + +
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQLEHI 257
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 28.5 bits (63), Expect = 1.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M CW E D RP F +
Sbjct: 234 MYSCWHEKADERPTFKIL 251
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 309
Score = 28.6 bits (63), Expect = 1.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTLNQGR 29
MRQCW E P RP F ++ + + R
Sbjct: 259 MRQCWREKPYERPSFAQILVSLNRMLEER 287
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 276
Score = 28.4 bits (63), Expect = 1.7
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M +C + D RP F ++
Sbjct: 246 MAECLKKKRDERPLFPQI 263
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 263
Score = 28.5 bits (63), Expect = 1.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M CW E P+ RP F+ +
Sbjct: 235 MNHCWKERPEDRPAFSRL 252
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 283
Score = 28.3 bits (62), Expect = 2.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M QCW + RP F ++
Sbjct: 246 MMQCWQQERARRPKFADI 263
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 181
Score = 27.9 bits (62), Expect = 2.1
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 61 KVNFVDTMFQMLEKYSNNLEDLIRERTEQLDIEKKKTEQLLNRMLPRKVNFVDTMFQMLE 120
KV V +E +LEDL ++ D + K + + + +L+
Sbjct: 10 KVRNVKDKVMCIEHEIKSLEDL----QDEYDFKCKTLQNREHETNGVAKSDQKQEQLLLK 65
Query: 121 KYSNNLEDLIRERTEQLDIEKKKTEQLLNRMLPSSVAE 158
K L++ +E ++ TE N ++ + E
Sbjct: 66 KMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVE 103
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 299
Score = 28.2 bits (62), Expect = 2.1
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M CW + + RP F ++
Sbjct: 266 MLDCWQKDRNHRPKFGQI 283
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 308
Score = 28.3 bits (62), Expect = 2.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
MR CW P MRP F E+
Sbjct: 268 MRMCWQYNPKMRPSFLEI 285
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 28.1 bits (62), Expect = 2.1
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFK 23
M QCW + P+ RP F + +
Sbjct: 247 MCQCWRKEPEERPTFEYLQAFLE 269
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 28.2 bits (62), Expect = 2.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1 MRQCWAEPPDMRPDFNEVNDLFKTL 25
M +CWA P RP F E+ T+
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQLSTI 266
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 27.9 bits (61), Expect = 2.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
MR CW P RP F ++
Sbjct: 270 MRDCWHAVPSQRPTFKQL 287
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 325
Score = 27.8 bits (61), Expect = 2.8
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M+ CWA RP F +
Sbjct: 300 MQSCWAFDSRKRPSFPNL 317
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor
receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 27.9 bits (61), Expect = 3.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M CW P RP F+E+
Sbjct: 270 MLDCWHGEPSQRPTFSEL 287
>d2p7ja2 d.110.6.2 (A:9-180) GGDEF family protein VP0354 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 172
Score = 27.5 bits (60), Expect = 3.0
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 124 NNLEDLIRERTEQLDIEKKKTEQLLNRM-----LPSSVAEKLKLGMPVDPEDFREVTIYF 178
NN+E+ +E QL ++ + +++ L + + +
Sbjct: 1 NNVENTAKEALHQLAYTGREYNNIQDQIETISDLLGHSQSLYDYLREPSKANLTILENMW 60
Query: 179 SDI 181
S +
Sbjct: 61 SSV 63
Score = 26.3 bits (57), Expect = 6.5
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 77 NNLEDLIRERTEQLDIEKKKTEQLLNRML 105
NN+E+ +E QL ++ + +++
Sbjct: 1 NNVENTAKEALHQLAYTGREYNNIQDQIE 29
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 311
Score = 27.5 bits (60), Expect = 4.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 1 MRQCWAEPPDMRPDFNEV 18
M+ CW P RP F ++
Sbjct: 281 MKTCWDADPLKRPTFKQI 298
>d1fftc_ f.25.1.1 (C:) Cytochrome O ubiquinol oxidase, subunit III
{Escherichia coli [TaxId: 562]}
Length = 185
Score = 27.0 bits (59), Expect = 4.3
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 251 LHHSGRFKIRHLPYTPLRLRIGLHTGPCCAGVVGLT--MPRYCLFGDTVNTASRLESTGA 308
L +G R + +G H +G++ + M + G T +R+
Sbjct: 105 LIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSL 164
Query: 309 PW 310
W
Sbjct: 165 FW 166
>d1d8ja_ a.4.5.18 (A:) The central core domain of TFIIE beta {Human
(Homo sapiens) [TaxId: 9606]}
Length = 81
Score = 24.8 bits (54), Expect = 9.3
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 105 LPRKVNFVDTMFQMLEKYSNNLEDLIRERTEQLDIEKKKTEQLLNRMLPS 154
L + VN++ T Q + + L++++ + T+ LDI K+ + L+ L +
Sbjct: 13 LAKIVNYMKTRHQRGDTHPLTLDEIL-DETQHLDIGLKQKQWLMTEALVN 61
>d2qwva1 c.116.1.7 (A:5-205) Uncharacterized protein VCA1059 {Vibrio
cholerae [TaxId: 666]}
Length = 201
Score = 25.9 bits (57), Expect = 9.4
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 368 SHGLDEN----LILYGRTGPSTTIDLSPTEARSNH 398
+ E+ L+L S TI + E
Sbjct: 42 AQSHREDVVIHLVLESTRDYSRTITVEANEISDVG 76
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal
domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Length = 275
Score = 26.0 bits (57), Expect = 9.8
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 19/131 (14%)
Query: 39 LRYKNPHLGLRLK-----SLLYIDS-PRKVNFVDTMFQMLEKYSNNLEDLIRERTEQL-- 90
+ +N +K S+ + S + VN+ D + + E Y E E+ +
Sbjct: 17 IMVENDGFIATIKPHYGGSIFELSSKRKAVNYNDVLPRRWEHYHEVPEATKPEKESEEGI 76
Query: 91 ----DIEKKKTEQLLNRMLP---RKVNFVDTMFQM---LEKYSNN-LEDLIRERTEQLDI 139
++ K+ E++ + + D + L+ Y +L + +
Sbjct: 77 ASIHELGKQIPEEIRRELAYDWQLRAILQDHFIKPEETLDNYRLVKYHELGDFVNQPYEY 136
Query: 140 EKKKTEQLLNR 150
E + L R
Sbjct: 137 EMIENGVKLWR 147
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.399
Gapped
Lambda K H
0.267 0.0650 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,803,344
Number of extensions: 85335
Number of successful extensions: 310
Number of sequences better than 10.0: 1
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 44
Length of query: 487
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 398
Effective length of database: 1,185,626
Effective search space: 471879148
Effective search space used: 471879148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.1 bits)