RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13821
(349 letters)
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 113 bits (284), Expect = 3e-29
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
L+ RH N+ F+G+ P A+V ++C SL L E K + + + RG
Sbjct: 74 LRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 116 MRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE--LLWTA 173
M YLH+ +H +L S N + +KI D+ L + ++ Q +LW A
Sbjct: 133 MDYLHA-KSIIHRDLKSNNIFLHEDNTVKIGDFGL-ATEKSRWSGSHQFEQLSGSILWMA 190
Query: 174 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPFIGFLW 220
PE++R + S DVY+FGI++ E++ L + N+N +
Sbjct: 191 PEVIRMQDS-NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236
Score = 88.9 bits (221), Expect = 2e-20
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 43/159 (27%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT 258
EV VL+ RH N+ F+G+ P A+V ++C SL L E K + + +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 259 DLVRGMRYLHSVP--HR--------LHE------------------------------LL 278
RGM YLH+ HR LHE +L
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
W APE++R + S DVY+FGI++ E++ P+
Sbjct: 188 WMAPEVIRMQDS-NPYSFQSDVYAFGIVLYELMTGQLPY 225
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 111 bits (280), Expect = 1e-28
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 23 KARYNGDLV---QMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGP-A 78
K +++GD V +K V + V L + RH N+ F+G++ A
Sbjct: 54 KGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKT---RHVNILLFMGYMTKD--NLA 107
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVP--HRLHGNLTSRNCV 136
+V ++C SL L E K + + +GM YLH+ HR ++ S N
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR---DMKSNNIF 164
Query: 137 IDARWVLKITDYALNSFYDAQNIPPRQKTAR-ELLWTAPELLRDEAHRLRGSQPGDVYSF 195
+ +KI D+ L + + + + +LW APE++R + + S DVYS+
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN-PFSFQSDVYSY 223
Query: 196 GIIIQEVVLQGLRHENLNPFIGFLW 220
GI++ E++ L + ++N ++
Sbjct: 224 GIVLYELMTGELPYSHINNRDQIIF 248
Score = 86.2 bits (214), Expect = 2e-19
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 45/160 (28%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGP-ALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLL 257
EV VL+ RH N+ F+G++ A+V ++C SL L E K + +
Sbjct: 81 NEVAVLRKTRHVNILLFMGYMTKD--NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIA 138
Query: 258 TDLVRGMRYLHSVP--HR--------LHE------------------------------L 277
+GM YLH+ HR LHE +
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 278 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
LW APE++R + + S DVYS+GI++ E++ P+
Sbjct: 199 LWMAPEVIRMQDNN-PFSFQSDVYSYGIVLYELMTGELPY 237
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 111 bits (279), Expect = 2e-28
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 23 KARYNGDLV---QMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPAL 79
+A ++G V + H + + V + + LRH N+ F+G + P ++
Sbjct: 55 RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIM---KRLRHPNIVLFMGAVTQPPNLSI 111
Query: 80 VWEFCCRGSLEDVLVQDEIK--LDWTFRLSLLTDLVRGMRYLHSV-PHRLHGNLTSRNCV 136
V E+ RGSL +L + + LD RLS+ D+ +GM YLH+ P +H NL S N +
Sbjct: 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL 171
Query: 137 IDARWVLKITDYALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFG 196
+D ++ +K+ D+ L S A + A W APE+LRDE ++ DVYSFG
Sbjct: 172 VDKKYTVKVCDFGL-SRLKASTFLSSKSAAGTPEWMAPEVLRDEPS----NEKSDVYSFG 226
Query: 197 IIIQEVVLQGLRHENLNPF 215
+I+ E+ NLNP
Sbjct: 227 VILWELATLQQPWGNLNPA 245
Score = 88.5 bits (220), Expect = 3e-20
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 47/161 (29%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIK--LDWTFRLSL 256
+EV +++ LRH N+ F+G + P ++V E+ RGSL +L + + LD RLS+
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 257 LTDLVRGMRYLHS----VPHR--------LHE---------------------------- 276
D+ +GM YLH+ + HR + +
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGT 202
Query: 277 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
W APE+LRDE ++ DVYSFG+I+ E+ +P+
Sbjct: 203 PEWMAPEVLRDEPS----NEKSDVYSFGVILWELATLQQPW 239
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 110 bits (276), Expect = 3e-28
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGP--ALV 80
K R+ G+ + +K + + + + +L+ H N+ P +G P P L+
Sbjct: 28 KGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87
Query: 81 WEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDLVRGMRYLHS----VPHRLHGNLTSRNC 135
+ GSL +VL + +D + + D+ RGM +LH+ +P L SR+
Sbjct: 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRH---ALNSRSV 144
Query: 136 VIDARWVLKITDYALNSFYDAQNIPPRQKTARE--LLWTAPELLRDEAHRLRGSQPGDVY 193
+ID +I+ + Q R W APE L+ + + D++
Sbjct: 145 MIDEDMTARISMADVKFS--------FQSPGRMYAPAWVAPEALQKKPEDTN-RRSADMW 195
Query: 194 SFGIIIQEVV 203
SF +++ E+V
Sbjct: 196 SFAVLLWELV 205
Score = 93.8 bits (234), Expect = 2e-22
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 40/157 (25%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGP--ALVWEFCCRGSLEDVLVQDE-IKLDWTFRLS 255
+E L+ H N+ P +G P P L+ + GSL +VL + +D + +
Sbjct: 56 EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVK 115
Query: 256 LLTDLVRGMRYLHS----VPHR----LHELL---------------------------WT 280
D+ RGM +LH+ +P ++ W
Sbjct: 116 FALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWV 175
Query: 281 APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
APE L+ + + D++SF +++ E+V R PF
Sbjct: 176 APEALQKKPEDTN-RRSADMWSFAVLLWELVTREVPF 211
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 110 bits (277), Expect = 4e-28
Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
++ L H N+ FIG L+ + E+ G+L ++ + + W+ R+S D+ G
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 116 MRYLHSVP--HRLHGNLTSRNCVIDARWVLKITDYAL--------NSFYDAQNIPPRQKT 165
M YLHS+ HR +L S NC++ + + D+ L +++ +
Sbjct: 121 MAYLHSMNIIHR---DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 166 ARELL-----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPF 215
R + W APE++ ++ + DV+SFGI++ E++ + + P
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSY----DEKVDVFSFGIVLCEIIGRVNADPDYLPR 228
Score = 74.3 bits (183), Expect = 3e-15
Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 49/167 (29%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT 258
+EV V++ L H N+ FIG L+ + E+ G+L ++ + + W+ R+S
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 259 DLVRGMRYLHSVP--HR---------------------------LHELLWTAPELLRDEA 289
D+ GM YLHS+ HR + L+
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 290 HRLRGSQPG-------------------DVYSFGIIIQEVVVRGEPF 317
+ R + G DV+SFGI++ E++ R
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 107 bits (269), Expect = 5e-27
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 22/195 (11%)
Query: 23 KARYNGDLV---QMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPAL 79
R++G+ V + + + ++ + V Q RHEN+ F+G P A+
Sbjct: 51 HGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQT---RHENVVLFMGACMSPPHLAI 106
Query: 80 VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVP--HRLHGNLTSRNCVI 137
+ C +L V+ +I LD + ++V+GM YLH+ H+ +L S+N
Sbjct: 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK---DLKSKNVFY 163
Query: 138 DARWVLKITDYALNSFYDAQNIPPRQKTARE----LLWTAPELLRDEAHRLRGSQPG--- 190
D + ITD+ L S R+ R L APE++R + +
Sbjct: 164 D-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK 222
Query: 191 --DVYSFGIIIQEVV 203
DV++ G I E+
Sbjct: 223 HSDVFALGTIWYELH 237
Score = 89.0 bits (221), Expect = 3e-20
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 48/166 (28%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT 258
+EV + RHEN+ F+G P A++ C +L V+ +I LD +
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137
Query: 259 DLVRGMRYLHSVP--HR-------LHE--------------------------------- 276
++V+GM YLH+ H+ ++
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 277 LLWTAPELLRDEAHRLRGSQPG-----DVYSFGIIIQEVVVRGEPF 317
L APE++R + + DV++ G I E+ R PF
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 105 bits (265), Expect = 2e-26
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALVWE 82
KA++ V +K + + + L + H N+ G +P LV E
Sbjct: 26 KAKWRAKDVAIK-QIESESERKAFIVELRQL---SRVNHPNIVKLYGACLNP--VCLVME 79
Query: 83 FCCRGSLEDVLVQDE--IKLDWTFRLSLLTDLVRGMRYLHSVPHR--LHGNLTSRNCVID 138
+ GSL +VL E +S +G+ YLHS+ + +H +L N ++
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV 139
Query: 139 ARW-VLKITDYALNSFYDAQNIPPRQKTARE-LLWTAPELLRDEAHRLRGSQPGDVYSFG 196
A VLKI D+ A +I + W APE+ + S+ DV+S+G
Sbjct: 140 AGGTVLKICDFGT-----ACDIQTHMTNNKGSAAWMAPEVFEGSNY----SEKCDVFSWG 190
Query: 197 IIIQEVV 203
II+ EV+
Sbjct: 191 IILWEVI 197
Score = 93.2 bits (232), Expect = 7e-22
Identities = 41/168 (24%), Positives = 60/168 (35%), Gaps = 48/168 (28%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDE--IKLDWTFRLS 255
I E+ L + H N+ G +P LV E+ GSL +VL E +S
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 256 LLTDLVRGMRYLHSVP-----HR--------LHE-------------------------- 276
+G+ YLHS+ HR L
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGS 166
Query: 277 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFCMLSLTP 324
W APE+ + S+ DV+S+GII+ EV+ R +PF +
Sbjct: 167 AAWMAPEVFEGSNY----SEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 105 bits (264), Expect = 2e-26
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
+ L H N+ G + +P P +V EF G L L+ + W+ +L L+ D+ G
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 116 MRYLHSV-PHRLHGNLTSRNCVIDARW-----VLKITDYALNSFYDAQNIPPRQKTARE- 168
+ Y+ + P +H +L S N + + K+ D+ L +Q
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLLGN 189
Query: 169 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE + E ++ D YSF +I+ ++
Sbjct: 190 FQWMAPETIGAE--EESYTEKADTYSFAMILYTIL 222
Score = 93.9 bits (234), Expect = 3e-22
Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 47/161 (29%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT 258
+EV ++ L H N+ G + +P P +V EF G L L+ + W+ +L L+
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLML 129
Query: 259 DLVRGMRYLHS----VPHR--------LHE------------------------------ 276
D+ G+ Y+ + + HR L
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN 189
Query: 277 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
W APE + E ++ D YSF +I+ ++ PF
Sbjct: 190 FQWMAPETIGAE--EESYTEKADTYSFAMILYTILTGEGPF 228
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 104 bits (261), Expect = 1e-25
Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA---- 78
+ ++ G+ V +K + + Q LRHEN+ FI G
Sbjct: 60 RGKWRGEEVAVKIFSSREERSWFREAEI---YQTVMLRHENILGFIAADNKDNGTWTQLW 116
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSV-------PHRLHGNLT 131
LV ++ GSL D L + + + L G+ +LH P H +L
Sbjct: 117 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 132 SRNCVIDARWVLKITDYAL----NSFYDAQNIPPRQK--TARELLWTAPELLRDEA--HR 183
S+N ++ I D L +S D +I P + T R + APE+L D
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR---YMAPEVLDDSINMKH 231
Query: 184 LRGSQPGDVYSFGIIIQEVV 203
+ D+Y+ G++ E+
Sbjct: 232 FESFKRADIYAMGLVFWEIA 251
Score = 67.9 bits (166), Expect = 6e-13
Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 59/175 (33%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPA----LVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
E+ LRHEN+ FI G LV ++ GSL D L + + +
Sbjct: 85 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMI 142
Query: 255 SLLTDLVRGMRYLHS----------VPHR--------LHELL------------------ 278
L G+ +LH + HR + +
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202
Query: 279 --------------WTAPELLRDEA--HRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+ APE+L D + D+Y+ G++ E+ R
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 102 bits (257), Expect = 2e-25
Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 27/200 (13%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA---- 78
+ ++ G+ V +K + + Q LRHEN+ FI G
Sbjct: 21 RGKWRGEEVAVKIFSSREERSWFREAEI---YQTVMLRHENILGFIAADNKDNGTWTQLW 77
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGN-------LT 131
LV ++ GSL D L + + + L G+ +LH G L
Sbjct: 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 132 SRNCVIDARWVLKITDYAL----NSFYDAQNIPPRQK--TARELLWTAPELLRDEA--HR 183
S+N ++ I D L +S D +I P + T R + APE+L D
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR---YMAPEVLDDSINMKH 192
Query: 184 LRGSQPGDVYSFGIIIQEVV 203
+ D+Y+ G++ E+
Sbjct: 193 FESFKRADIYAMGLVFWEIA 212
Score = 68.9 bits (169), Expect = 2e-13
Identities = 33/175 (18%), Positives = 52/175 (29%), Gaps = 59/175 (33%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPA----LVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
E+ LRHEN+ FI G LV ++ GSL D L + + +
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMI 103
Query: 255 SLLTDLVRGMRYLHS----------VPHR------------------------LHE---- 276
L G+ +LH + HR H+
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 163
Query: 277 ------------LLWTAPELLRDEA--HRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+ APE+L D + D+Y+ G++ E+ R
Sbjct: 164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 101 bits (253), Expect = 4e-25
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPA 78
+A + GD V +K + E S++++++ Q L+H N+ G
Sbjct: 25 RAFWIGDEVAVKA--ARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS--VPHRLHGNLTSRNCV 136
LV EF G L VL ++ ++ + RGM YLH + +H +L S N +
Sbjct: 83 LVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140
Query: 137 ID--------ARWVLKITDYALNSFYDAQNIPPRQKTARE--LLWTAPELLRDEAHRLRG 186
I + +LKITD+ L A+ K + W APE++R
Sbjct: 141 ILQKVENGDLSNKILKITDFGL-----AREWHRTTKMSAAGAYAWMAPEVIRASMF---- 191
Query: 187 SQPGDVYSFGIIIQEVV 203
S+ DV+S+G+++ E++
Sbjct: 192 SKGSDVWSYGVLLWELL 208
Score = 80.0 bits (198), Expect = 2e-17
Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 54/167 (32%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLL 257
QE + L+H N+ G LV EF G L VL ++ ++
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWA 111
Query: 258 TDLVRGMRYLHS-----VPHR--------LHELL-------------------------- 278
+ RGM YLH + HR + + +
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 279 --------WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
W APE++R S+ DV+S+G+++ E++ PF
Sbjct: 172 MSAAGAYAWMAPEVIRASMF----SKGSDVWSYGVLLWELLTGEVPF 214
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 101 bits (253), Expect = 8e-25
Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 27/200 (13%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIG----FLWDPTGPA 78
+ + G+ V +K + + LRHEN+ FI T
Sbjct: 26 RGSWQGENVAVKIFSSRDEKSWFRETEL---YNTVMLRHENILGFIASDMTSRHSSTQLW 82
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSV-------PHRLHGNLT 131
L+ + GSL D L LD L ++ + G+ +LH P H +L
Sbjct: 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 132 SRNCVIDARWVLKITDYALNSFYDAQNIPPRQK------TARELLWTAPELLRDE--AHR 183
S+N ++ I D L + T R + APE+L +
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR---YMAPEVLDETIQVDC 197
Query: 184 LRGSQPGDVYSFGIIIQEVV 203
+ D+++FG+++ EV
Sbjct: 198 FDSYKRVDIWAFGLVLWEVA 217
Score = 67.4 bits (165), Expect = 7e-13
Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 59/175 (33%)
Query: 200 QEV-VLQGLRHENLNPFIG----FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
E+ LRHEN+ FI T L+ + GSL D L LD L
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCL 108
Query: 255 SLLTDLVRGMRYLHS----------VPHR------------------------LHE---- 276
++ + G+ +LH + HR +H
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
Query: 277 ------------LLWTAPELLRDE--AHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+ APE+L + + D+++FG+++ EV R
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 100 bits (252), Expect = 2e-24
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 27/200 (13%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGP----A 78
++ G+ V +K + + Q +RHEN+ FI TG
Sbjct: 55 MGKWRGEKVAVKVFFTTEEASWFRETEI---YQTVLMRHENILGFIAADIKGTGSWTQLY 111
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSV-------PHRLHGNLT 131
L+ ++ GSL D L LD L L V G+ +LH+ P H +L
Sbjct: 112 LITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 132 SRNCVIDARWVLKITDYAL----NSFYDAQNIPPRQK--TARELLWTAPELLRDEAHRLR 185
S+N ++ I D L S + +IPP + T R + PE+L + +R
Sbjct: 170 SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR---YMPPEVLDESLNRNH 226
Query: 186 G--SQPGDVYSFGIIIQEVV 203
D+YSFG+I+ EV
Sbjct: 227 FQSYIMADMYSFGLILWEVA 246
Score = 68.2 bits (167), Expect = 4e-13
Identities = 37/170 (21%), Positives = 53/170 (31%), Gaps = 58/170 (34%)
Query: 204 LQGLRHENLNPFIGFLWDPTGP----ALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTD 259
+RHEN+ FI TG L+ ++ GSL D L LD L L
Sbjct: 85 TVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYS 142
Query: 260 LVRGMRYLHS----------VPHR------------------------LHE--------- 276
V G+ +LH+ + HR
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 277 -------LLWTAPELLRDEAHRLRG--SQPGDVYSFGIIIQEVVVRGEPF 317
+ PE+L + +R D+YSFG+I+ EV R
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 95.9 bits (239), Expect = 9e-23
Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 32/225 (14%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA---- 78
KA+ + V +K P+ V L G++HEN+ FIG T
Sbjct: 42 KAQLLNEYVAVKIFPIQDKQSWQNEYEV---YSLPGMKHENILQFIGAEKRGTSVDVDLW 98
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS---------VPHRLHGN 129
L+ F +GSL D L + + W + + RG+ YLH P H +
Sbjct: 99 LITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRD 156
Query: 130 LTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK----TARELLWTAPELLRDEAH-RL 184
+ S+N ++ I D+ L ++A T R + APE+L + +
Sbjct: 157 IKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR---YMAPEVLEGAINFQR 213
Query: 185 RGSQPGDVYSFGIIIQEVV-----LQGLRHENLNPFIGFLW-DPT 223
D+Y+ G+++ E+ G E + PF + P+
Sbjct: 214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258
Score = 67.8 bits (166), Expect = 6e-13
Identities = 34/174 (19%), Positives = 55/174 (31%), Gaps = 58/174 (33%)
Query: 200 QEV-VLQGLRHENLNPFIGFLWDPTGPA----LVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
EV L G++HEN+ FIG T L+ F +GSL D L + + W
Sbjct: 67 YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELC 124
Query: 255 SLLTDLVRGMRYLHSVPHRLHELL------------------------------------ 278
+ + RG+ YLH L +
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 279 --------------WTAPELLRDEAH-RLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+ APE+L + + D+Y+ G+++ E+ R
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 91.1 bits (226), Expect = 7e-21
Identities = 54/276 (19%), Positives = 90/276 (32%), Gaps = 46/276 (16%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA---- 78
K + V +K + K++ ++ + H+N+ FI T
Sbjct: 31 KGSLDERPVAVKVFSFANRQNFINEKNI---YRVPLMEHDNIARFIVGDERVTADGRMEY 87
Query: 79 -LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS--------VPHRLHGN 129
LV E+ GSL L DW L + RG+ YLH+ P H +
Sbjct: 88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 130 LTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK----------TARELLWTAPELLRD 179
L SRN ++ I+D+ L+ + + T R + APE+L
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR---YMAPEVLEG 202
Query: 180 E---AHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGS 236
+ D+Y+ G+I E+ +R +L P A E +
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIF---MRCTDLFPGESV--PEYQMAFQTEVGNHPT 257
Query: 237 LED----VLVQD---EIKLDWTFRLSLLTDLVRGMR 265
ED V + + W + L +
Sbjct: 258 FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293
Score = 56.8 bits (137), Expect = 3e-09
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 204 LQGLRHENLNPFIGFLWDPTGPA-----LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT 258
+ + H+N+ FI T LV E+ GSL L DW L
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAH 118
Query: 259 DLVRGMRYLHS 269
+ RG+ YLH+
Sbjct: 119 SVTRGLAYLHT 129
Score = 32.5 bits (74), Expect = 0.20
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 279 WTAPELLRDE---AHRLRGSQPGDVYSFGIIIQEVVVR 313
+ APE+L + D+Y+ G+I E+ +R
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 69.2 bits (170), Expect = 2e-13
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 24/155 (15%)
Query: 59 LRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGM 116
H N+ IG P +V E G L + +L L ++ D GM
Sbjct: 169 YSHPNIVRLIGVCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 117 RYLHSVP--HRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL---- 170
YL S HR +L +RNC++ + VLKI+D+ + ++ A L
Sbjct: 227 EYLESKCCIHR---DLAARNCLVTEKNVLKISDFGM-----SREEADGVYAASGGLRQVP 278
Query: 171 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
WTAPE L R S DV+SFGI++ E
Sbjct: 279 VKWTAPEALNYG----RYSSESDVWSFGILLWETF 309
Score = 48.0 bits (115), Expect = 2e-06
Identities = 37/155 (23%), Positives = 49/155 (31%), Gaps = 48/155 (30%)
Query: 203 VLQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDL 260
+L+ H N+ IG P +V E G L + +L L ++ D
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDA 222
Query: 261 VRGMRYLHSVP--HR--------LHELL------------------------------WT 280
GM YL S HR + E WT
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 281 APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
APE L R S DV+SFGI++ E G
Sbjct: 283 APEALNYG----RYSSESDVWSFGILLWETFSLGA 313
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 65.0 bits (159), Expect = 4e-12
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 59 LRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMR 117
L H N+ IG + P G + + C G L + + +S + RGM
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 118 YLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL---WTAP 174
YL +H +L +RNC++D + +K+ D+ L + Q+ L WTA
Sbjct: 139 YLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 175 ELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
E L+ R + DV+SFG+++ E++
Sbjct: 198 ESLQTY----RFTTKSDVWSFGVLLWELL 222
Score = 41.5 bits (98), Expect = 2e-04
Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 47/156 (30%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 261
+++GL H N+ IG + P G + + C G L + + +S +
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134
Query: 262 RGMRYLHSVP--HR-------------------------LHE------------LL---W 279
RGM YL HR + + L W
Sbjct: 135 RGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 280 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
TA E L+ R + DV+SFG+++ E++ RG
Sbjct: 195 TALESLQTY----RFTTKSDVWSFGVLLWELLTRGA 226
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 65.2 bits (159), Expect = 5e-12
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
++ H N+ +G G L V + G L + + + + + +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL---W 171
GM++L S +H +L +RNC++D ++ +K+ D+ L + L W
Sbjct: 204 GMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 172 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
A E L+ + ++ DV+SFG+++ E++
Sbjct: 263 MALESLQT---QKFTTK-SDVWSFGVLLWELM 290
Score = 41.7 bits (98), Expect = 2e-04
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 47/156 (30%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 261
+++ H N+ +G G L V + G L + + + + +
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 202
Query: 262 RGMRYLHSVP--HR-------------------------LHE------------LL---W 279
+GM++L S HR +++ L W
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 280 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
A E L+ + ++ DV+SFG+++ E++ RG
Sbjct: 263 MALESLQT---QKFTTK-SDVWSFGVLLWELMTRGA 294
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 64.6 bits (158), Expect = 6e-12
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
++ H N+ +G G L V + G L + + + + + +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL---W 171
GM+YL S +H +L +RNC++D ++ +K+ D+ L + L W
Sbjct: 140 GMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 172 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
A E L+ + + + DV+SFG+++ E++
Sbjct: 199 MALESLQTQ----KFTTKSDVWSFGVLLWELM 226
Score = 42.3 bits (100), Expect = 1e-04
Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 47/156 (30%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPAL-VWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 261
+++ H N+ +G G L V + G L + + + + +
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 138
Query: 262 RGMRYLHSVP--HR-------------------------LHE------------LL---W 279
+GM+YL S HR +++ L W
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 280 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
A E L+ + + + DV+SFG+++ E++ RG
Sbjct: 199 MALESLQTQ----KFTTKSDVWSFGVLLWELMTRGA 230
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 62.3 bits (152), Expect = 3e-11
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
L+ L HEN+ + G + G L+ EF GSL++ L +++ K++ +L +
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQ 163
+GM YL S +H +L +RN ++++ +KI D+ L +Y ++ P
Sbjct: 137 KGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF- 194
Query: 164 KTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPFIGFLWDPT 223
W APE L + DV+SFG+ + E++ + + PT
Sbjct: 195 -------WYAPECLMQS----KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT 243
Query: 224 GPALVWE 230
+
Sbjct: 244 HGQMTVT 250
Score = 41.5 bits (98), Expect = 2e-04
Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 47/159 (29%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDL 260
+L+ L HEN+ + G + G L+ EF GSL++ L +++ K++ +L +
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 261 VRGMRYLHSVP--HR---------------------LHELL------------------W 279
+GM YL S HR L + + W
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFW 195
Query: 280 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFC 318
APE L + DV+SFG+ + E++ +
Sbjct: 196 YAPECLMQS----KFYIASDVWSFGVTLHELLTYCDSDS 230
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 61.8 bits (151), Expect = 4e-11
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
L H L G + LV EF G L D L L + D+ GM Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 119 L--HSVPHRLHGNLTSRNCVIDARWVLKITDYAL-----NSFYDAQN---IPPRQKTARE 168
L V HR +L +RNC++ V+K++D+ + + Y + P +
Sbjct: 120 LEEACVIHR---DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK------ 170
Query: 169 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLR 208
W +PE+ R S DV+SFG+++ EV +G
Sbjct: 171 --WASPEVFSFS----RYSSKSDVWSFGVLMWEVFSEGKI 204
Score = 40.3 bits (95), Expect = 5e-04
Identities = 35/152 (23%), Positives = 48/152 (31%), Gaps = 43/152 (28%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 262
V+ L H L G + LV EF G L D L L + D+
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 263 GMRYL--HSVPHR---------------------LHELL----------------WTAPE 283
GM YL V HR + + W +PE
Sbjct: 116 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 284 LLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
+ R S DV+SFG+++ EV G+
Sbjct: 176 VFSFS----RYSSKSDVWSFGVLMWEVFSEGK 203
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 62.3 bits (152), Expect = 4e-11
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
+ + ++ +G T L+ + G L D + + + + + L+ + +GM Y
Sbjct: 74 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 119 LHSVPHRL-HGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN--IPPRQKTARE 168
L RL H +L +RN ++ +KITD+ L Y A+ +P +
Sbjct: 133 LED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK------ 184
Query: 169 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W A E + + DV+S+G+ + E++
Sbjct: 185 --WMALESILHR----IYTHQSDVWSYGVTVWELM 213
Score = 41.8 bits (99), Expect = 2e-04
Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 49/163 (30%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
I+ E V+ + + ++ +G T L+ + G L D + + + + + L+
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 257 LTDLVRGMRYLHS---VPHR---------------------LHELL-------------- 278
+ +GM YL V HR L +LL
Sbjct: 123 CVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 279 ---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
W A E + + DV+S+G+ + E++ G P+
Sbjct: 182 PIKWMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPY 220
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 61.1 bits (149), Expect = 7e-11
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 29/157 (18%)
Query: 59 LRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGM 116
L HE L G P ++ E+ G L + L + + L + D+ M
Sbjct: 76 LSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 133
Query: 117 RYL--HSVPHRLHGNLTSRNCVIDARWVLKITDYAL-----NSFYDAQN---IPPRQKTA 166
YL HR +L +RNC+++ + V+K++D+ L + Y + P R
Sbjct: 134 EYLESKQFLHR---DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR---- 186
Query: 167 RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W+ PE+L + S D+++FG+++ E+
Sbjct: 187 ----WSPPEVLMYS----KFSSKSDIWAFGVLMWEIY 215
Score = 39.9 bits (94), Expect = 8e-04
Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 48/159 (30%)
Query: 199 IQEV-VLQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
I+E V+ L HE L G P ++ E+ G L + L + + L
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLREMRHRFQTQQLLE 124
Query: 256 LLTDLVRGMRYL--HSVPHR---------------------LHELL-------------- 278
+ D+ M YL HR L +
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184
Query: 279 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W+ PE+L + S D+++FG+++ E+ G+
Sbjct: 185 VRWSPPEVLMYS----KFSSKSDIWAFGVLMWEIYSLGK 219
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 62.1 bits (151), Expect = 8e-11
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDLVR 114
++ ++H NL +G ++ EF G+L D L + ++ L + T +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWTAP 174
M YL + +H NL +RNC++ ++K+ D+ L+ + WTAP
Sbjct: 330 AMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 175 ELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
E L + S DV++FG+++ E+ G
Sbjct: 389 ESLAYN----KFSIKSDVWAFGVLLWEIATYG 416
Score = 39.8 bits (93), Expect = 0.001
Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 44/153 (28%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDLV 261
V++ ++H NL +G ++ EF G+L D L + ++ L + T +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 262 RGMRYLHS--VPHR------------------------LHE-------------LLWTAP 282
M YL HR L + WTAP
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
Query: 283 ELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
E L + S DV++FG+++ E+ G
Sbjct: 389 ESLAYN----KFSIKSDVWAFGVLLWEIATYGM 417
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 60.3 bits (147), Expect = 1e-10
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 29/157 (18%)
Query: 59 LRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGM 116
L H L F G P +V E+ G L + L L+ + L + D+ GM
Sbjct: 60 LSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 117 RYL--HSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN--IPPRQKTA 166
+L H HR +L +RNC++D +K++D+ + + + + P +
Sbjct: 118 AFLESHQFIHR---DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK---- 170
Query: 167 RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W+APE+ + S DV++FGI++ EV
Sbjct: 171 ----WSAPEVFHYF----KYSSKSDVWAFGILMWEVF 199
Score = 39.9 bits (94), Expect = 6e-04
Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 49/162 (30%)
Query: 199 IQEV-VLQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
QE + L H L F G P +V E+ G L + L L+ + L
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLRSHGKGLEPSQLLE 108
Query: 256 LLTDLVRGMRYL--HSVPHR---------------------LHELL-------------- 278
+ D+ GM +L H HR + +
Sbjct: 109 MCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168
Query: 279 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
W+APE+ + S DV++FGI++ EV G+ P+
Sbjct: 169 VKWSAPEVFHYF----KYSSKSDVWAFGILMWEVFSLGKMPY 206
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 60.4 bits (147), Expect = 1e-10
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
L+ L+H+N+ + G + L+ E+ GSL D L + + ++D L + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQ 163
+GM YL + +H +L +RN +++ +KI D+ L F+ + P
Sbjct: 125 KGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF- 182
Query: 164 KTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE L + + S DV+SFG+++ E+
Sbjct: 183 -------WYAPESLTES----KFSVASDVWSFGVVLYELF 211
Score = 41.1 bits (97), Expect = 3e-04
Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 51/189 (26%)
Query: 184 LRGSQPGDVYSFGIIIQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDV 240
L+ S + F +E+ +L+ L+H+N+ + G + L+ E+ GSL D
Sbjct: 47 LQHSTEEHLRDF---EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103
Query: 241 LVQDEIKLDWTFRLSLLTDLVRGMRYLHSVP--HR---------------------LHEL 277
L + + ++D L + + +GM YL + HR L ++
Sbjct: 104 LQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
Query: 278 L------------------WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFCM 319
L W APE L + + S DV+SFG+++ E+ E
Sbjct: 164 LPQDKEFFKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 320 LSLTPEGKL 328
+
Sbjct: 220 PPAEFMRMI 228
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 60.8 bits (148), Expect = 1e-10
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
L+ L + + + G + P + LV E+ G L D L + +LD + L + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK--TARE--- 168
+GM YL S +H +L +RN ++++ +KI D+ L A+ +P + RE
Sbjct: 138 KGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGL-----AKLLPLDKDYYVVREPGQ 191
Query: 169 --LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+ W APE L D S+ DV+SFG+++ E+
Sbjct: 192 SPIFWYAPESLSDN----IFSRQSDVWSFGVVLYELF 224
Score = 40.8 bits (96), Expect = 4e-04
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 50/162 (30%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
+E+ +L+ L + + + G + P + LV E+ G L D L + +LD + L
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 256 LLTDLVRGMRYLHS---VPHR---------------------LHELL------------- 278
+ + +GM YL S V HR L +LL
Sbjct: 132 YSSQICKGMEYLGSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 279 -----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L D S+ DV+SFG+++ E+ +
Sbjct: 191 QSPIFWYAPESLSDN----IFSRQSDVWSFGVVLYELFTYCD 228
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 61.4 bits (149), Expect = 1e-10
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDLV 113
++ LRHE L +P +V E+ +GSL D L + K L + + +
Sbjct: 316 MKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 114 RGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL- 170
GM Y+ HR +L + N ++ V K+ D+ L A+ I + TAR+
Sbjct: 374 SGMAYVERMNYVHR---DLRAANILVGENLVCKVADFGL-----ARLIEDNEYTARQGAK 425
Query: 171 ----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
WTAPE R + DV+SFGI++ E+ +G
Sbjct: 426 FPIKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKG 461
Score = 39.9 bits (93), Expect = 0.001
Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 47/154 (30%)
Query: 203 VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDL 260
V++ LRHE L +P +V E+ +GSL D L + K L + + +
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 372
Query: 261 VRGMRYLHS--VPHR-------------------------LHE------------LLWTA 281
GM Y+ HR + + + WTA
Sbjct: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA 432
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
PE R + DV+SFGI++ E+ +G
Sbjct: 433 PEAALYG----RFTIKSDVWSFGILLTELTTKGR 462
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 60.7 bits (148), Expect = 1e-10
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 49/172 (28%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL---VQDEIKLDWTFRLSLLTDL 112
L RH +L IGF + L++++ G+L+ L + + W RL +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 113 VRGMRYLH--SVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL 170
RG+ YLH ++ HR ++ S N ++D +V KITD+ + ++
Sbjct: 149 ARGLHYLHTRAIIHR---DVKSINILLDENFVPKITDFGI---------------SK--- 187
Query: 171 WTAPELLRDEAH---RLRGSQPG----------------DVYSFGIIIQEVV 203
EL D+ H ++G+ G DVYSFG+++ EV+
Sbjct: 188 -KGTEL--DQTHLSTVVKGT-LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Score = 54.1 bits (131), Expect = 2e-08
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 46/154 (29%)
Query: 201 EV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL---VQDEIKLDWTFRLSL 256
E+ L RH +L IGF + L++++ G+L+ L + + W RL +
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 257 LTDLVRGMRYLH--SVPHR--------LHE----------LLWTAPELLRDEAH---RLR 293
RG+ YLH ++ HR L E + EL D+ H ++
Sbjct: 145 CIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL--DQTHLSTVVK 202
Query: 294 GSQPG----------------DVYSFGIIIQEVV 311
G+ G DVYSFG+++ EV+
Sbjct: 203 GT-LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 60.5 bits (147), Expect = 1e-10
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
L+ L+H+N+ + G + L+ E+ GSL D L + + ++D L + +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQ 163
+GM YL + +H +L +RN +++ +KI D+ L +Y + P
Sbjct: 156 KGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF- 213
Query: 164 KTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE L + + S DV+SFG+++ E+
Sbjct: 214 -------WYAPESLTES----KFSVASDVWSFGVVLYELF 242
Score = 40.8 bits (96), Expect = 3e-04
Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 51/189 (26%)
Query: 184 LRGSQPGDVYSFGIIIQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDV 240
L+ S + F +E+ +L+ L+H+N+ + G + L+ E+ GSL D
Sbjct: 78 LQHSTEEHLRDF---EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134
Query: 241 LVQDEIKLDWTFRLSLLTDLVRGMRYLHSVP--HR---------------------LHEL 277
L + + ++D L + + +GM YL + HR L ++
Sbjct: 135 LQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194
Query: 278 L------------------WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFCM 319
L W APE L + + S DV+SFG+++ E+ E
Sbjct: 195 LPQDKEYYKVKEPGESPIFWYAPESLTES----KFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 320 LSLTPEGKL 328
+
Sbjct: 251 PPAEFMRMI 259
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 60.9 bits (148), Expect = 2e-10
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDLV 113
++ LRHE L +P +V E+ +GSL D L + K L + + +
Sbjct: 233 MKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 290
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL--- 170
GM Y+ + + +H +L + N ++ V K+ D+ L A+ I + TAR+
Sbjct: 291 SGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGL-----ARLIEDNEYTARQGAKFP 344
Query: 171 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
WTAPE R + DV+SFGI++ E+ +G
Sbjct: 345 IKWTAPEAALYG----RFTIKSDVWSFGILLTELTTKG 378
Score = 39.0 bits (91), Expect = 0.002
Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 47/154 (30%)
Query: 203 VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDL 260
V++ LRHE L +P +V E+ +GSL D L + K L + + +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 289
Query: 261 VRGMRYLHS--VPHR-------------------------LHE------------LLWTA 281
GM Y+ HR + + + WTA
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA 349
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
PE R + DV+SFGI++ E+ +G
Sbjct: 350 PEAALYG----RFTIKSDVWSFGILLTELTTKGR 379
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 60.5 bits (147), Expect = 2e-10
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
H N+ G + +V E+ GSL+ L + + + + +L + GM+Y
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 119 LHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAREL--LWTAPEL 176
L + +H +L +RN +I++ V K++D+ L + ++ WT+PE
Sbjct: 163 LSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 177 LRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLR 208
+ A+R + + DV+S+GI++ EV+ G R
Sbjct: 222 I---AYR-KFTSASDVWSYGIVLWEVMSYGER 249
Score = 40.0 bits (94), Expect = 7e-04
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 46/157 (29%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 262
++ H N+ G + +V E+ GSL+ L + + + + +L +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 263 GMRYL--HSVPHR-------------------------LHE--------------LLWTA 281
GM+YL HR L + + WT+
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
PE + A+R + + DV+S+GI++ EV+ GE P+
Sbjct: 219 PEAI---AYR-KFTSASDVWSYGIVLWEVMSYGERPY 251
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 60.1 bits (146), Expect = 2e-10
Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 23/185 (12%)
Query: 27 NGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDP-TGPALVW 81
V + +L + L+GL+H N+ F G +
Sbjct: 50 TTVEVAWCELQDR----KLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105
Query: 82 ---EFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS-VPHRLHGNLTSRNCVI 137
E G+L+ L + + S +++G+++LH+ P +H +L N I
Sbjct: 106 LVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
Query: 138 DAR-WVLKITDYALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFG 196
+KI D L + A T + APE+ ++ + DVY+FG
Sbjct: 165 TGPTGSVKIGDLGLATLKRASFAKAVIGT---PEFMAPEMYEEKY-----DESVDVYAFG 216
Query: 197 IIIQE 201
+ + E
Sbjct: 217 MCMLE 221
Score = 43.1 bits (102), Expect = 6e-05
Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 51/163 (31%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDP-TGPALVW---EFCCRGSLEDVLVQDEIKLDWTF 252
+E +L+GL+H N+ F G + E G+L+ L + +
Sbjct: 72 FKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKV 130
Query: 253 RLSLLTDLVRGMRYLHS----VPHR--------------------------LHELL---- 278
S +++G+++LH+ + HR
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 190
Query: 279 -----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEP 316
+ APE+ ++ + DVY+FG+ + E+ E
Sbjct: 191 IGTPEFMAPEMYEEKY-----DESVDVYAFGMCMLEMAT-SEY 227
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 60.7 bits (147), Expect = 2e-10
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
+ L + + IG LV E G L LV ++ + LL + G
Sbjct: 390 MHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 116 MRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQKT 165
M+YL + +H NL +RN ++ R KI+D+ L +S+Y A++ P +
Sbjct: 449 MKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK--- 504
Query: 166 ARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLR 208
W APE + R + S DV+S+G+ + E + G +
Sbjct: 505 -----WYAPECI---NFR-KFSSRSDVWSYGVTMWEALSYGQK 538
Score = 39.9 bits (93), Expect = 0.001
Identities = 32/154 (20%), Positives = 51/154 (33%), Gaps = 46/154 (29%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 262
++ L + + IG LV E G L LV ++ + LL +
Sbjct: 389 IMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 447
Query: 263 GMRYL--HSVPHR---------------------LHELL------------------WTA 281
GM+YL + HR L + L W A
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
PE + R + S DV+S+G+ + E + G+
Sbjct: 508 PECI---NFR-KFSSRSDVWSYGVTMWEALSYGQ 537
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 59.6 bits (145), Expect = 2e-10
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDLVRGMR 117
++H NL +G ++ EF G+L D L + + + L + T + M
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 118 YL--HSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWTAPE 175
YL + HR +L +RNC++ ++K+ D+ L+ + WTAPE
Sbjct: 126 YLEKKNFIHR---DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 176 LLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
L + S DV++FG+++ E+
Sbjct: 183 SLAYN----KFSIKSDVWAFGVLLWEIA 206
Score = 38.0 bits (89), Expect = 0.002
Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 44/153 (28%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDLV 261
V++ ++H NL +G ++ EF G+L D L + + + L + T +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 121
Query: 262 RGMRYL--HSVPHR---------------------LHELL----------------WTAP 282
M YL + HR L L+ WTAP
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 283 ELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
E L + S DV++FG+++ E+ G
Sbjct: 182 ESLAYN----KFSIKSDVWAFGVLLWEIATYGM 210
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 59.7 bits (145), Expect = 3e-10
Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
+ + ++ +G T L+ + G L D + + + + + L+ + +GM Y
Sbjct: 74 VDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 119 LHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN--IPPRQKTAREL 169
L +H +L +RN ++ +KITD+ L Y A+ +P +
Sbjct: 133 LEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK------- 184
Query: 170 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W A E + + DV+S+G+ + E++
Sbjct: 185 -WMALESILHR----IYTHQSDVWSYGVTVWELM 213
Score = 39.6 bits (93), Expect = 0.001
Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 46/159 (28%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
I+ E V+ + + ++ +G T L+ + G L D + + + + + L+
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 257 LTDLVRGMRYLHSVP--HR---------------------LHELL--------------- 278
+ +GM YL HR L +LL
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 279 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W A E + + DV+S+G+ + E++ G
Sbjct: 183 IKWMALESILHR----IYTHQSDVWSYGVTVWELMTFGS 217
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 59.6 bits (145), Expect = 3e-10
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
+ H N+ G + ++ E+ G+L+ L + + + + +L + G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 116 MRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL--------NSFYDAQ--NIPPRQKT 165
M+YL ++ + +H +L +RN ++++ V K++D+ L + Y IP R
Sbjct: 160 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR--- 215
Query: 166 ARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLR 208
WTAPE + ++R + + DV+SFGI++ EV+ G R
Sbjct: 216 -----WTAPEAI---SYR-KFTSASDVWSFGIVMWEVMTYGER 249
Score = 40.4 bits (95), Expect = 5e-04
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 46/157 (29%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 262
++ H N+ G + ++ E+ G+L+ L + + + + +L +
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 158
Query: 263 GMRYLHSVP--HR-------------------------LHE--------------LLWTA 281
GM+YL ++ HR L + + WTA
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
PE + ++R + + DV+SFGI++ EV+ GE P+
Sbjct: 219 PEAI---SYR-KFTSASDVWSFGIVMWEVMTYGERPY 251
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 59.1 bits (144), Expect = 3e-10
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 59 LRHENLNPFIGFLWDPTGPA-LVWEFCCRGSLEDVL-VQDEIKLDWTFRLSLLTDLVRGM 116
LRH NL +G + + G +V E+ +GSL D L + L L D+ M
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 117 RYL--HSVPHRLHGNLTSRNCVIDARWVLKITDYAL--NSFYDAQN--IPPRQKTARELL 170
YL ++ HR +L +RN ++ V K++D+ L + +P +
Sbjct: 131 EYLEGNNFVHR---DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-------- 179
Query: 171 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
WTAPE LR++ + S DV+SFGI++ E+
Sbjct: 180 WTAPEALREK----KFSTKSDVWSFGILLWEIY 208
Score = 40.7 bits (96), Expect = 3e-04
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 41/150 (27%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPA-LVWEFCCRGSLEDVL-VQDEIKLDWTFRLSLLTDL 260
V+ LRH NL +G + + G +V E+ +GSL D L + L L D+
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 261 VRGMRYL--HSVPHR--------LHELL-------------------------WTAPELL 285
M YL ++ HR + E WTAPE L
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEAL 186
Query: 286 RDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
R++ + S DV+SFGI++ E+ G
Sbjct: 187 REK----KFSTKSDVWSFGILLWEIYSFGR 212
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 58.8 bits (143), Expect = 4e-10
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
++ H ++ IG +P ++ E C G L L + LD + L
Sbjct: 70 MRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN--IPPRQKTA 166
+ YL S +H ++ +RN ++ + +K+ D+ L +++Y A +P +
Sbjct: 128 ALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK---- 182
Query: 167 RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE + R + DV+ FG+ + E++
Sbjct: 183 ----WMAPESINFR----RFTSASDVWMFGVCMWEIL 211
Score = 39.5 bits (93), Expect = 8e-04
Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 48/161 (29%)
Query: 199 IQEV-VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
+QE ++ H ++ IG +P ++ E C G L L + LD +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILY 121
Query: 257 LTDLVRGMRYLHSVP--HR-------------------------LHE------------L 277
L + YL S HR + + +
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 278 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
W APE + R + DV+ FG+ + E+++ G PF
Sbjct: 182 KWMAPESINFR----RFTSASDVWMFGVCMWEILMHGVKPF 218
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 59.3 bits (144), Expect = 6e-10
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDLV 113
++ L+H+ L +P ++ EF +GSL D L DE K + +
Sbjct: 237 MKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 294
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE----- 168
GM ++ + +H +L + N ++ A V KI D+ L A+ I + TARE
Sbjct: 295 EGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGL-----ARVIEDNEYTAREGAKFP 348
Query: 169 LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+ WTAPE + + DV+SFGI++ E+V
Sbjct: 349 IKWTAPEAINFG----SFTIKSDVWSFGILLMEIV 379
Score = 38.1 bits (89), Expect = 0.003
Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 47/154 (30%)
Query: 203 VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDL 260
V++ L+H+ L +P ++ EF +GSL D L DE K + +
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI 293
Query: 261 VRGMRYLHS--VPHR--------LHELL-----------------------------WTA 281
GM ++ HR + L WTA
Sbjct: 294 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA 353
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
PE + + DV+SFGI++ E+V G
Sbjct: 354 PEAINFG----SFTIKSDVWSFGILLMEIVTYGR 383
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 58.4 bits (142), Expect = 6e-10
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 56 LQGLRHENLNPFIGF-LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
+ L + + IG + LV E G L LV ++ + LL +
Sbjct: 64 MHQLDNPYIVRLIGVCQAEA--LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQK 164
GM+YL + +H +L +RN ++ R KI+D+ L +S+Y A++ P +
Sbjct: 122 GMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-- 178
Query: 165 TARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE + R + S DV+S+G+ + E +
Sbjct: 179 ------WYAPECI---NFR-KFSSRSDVWSYGVTMWEAL 207
Score = 38.4 bits (90), Expect = 0.002
Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 52/173 (30%)
Query: 186 GSQPGDVYSFGIIIQEV-VLQGLRHENLNPFIGF-LWDPTGPALVWEFCCRGSLEDVLVQ 243
G++ D ++E ++ L + + IG + LV E G L LV
Sbjct: 48 GTEKADTEEM---MREAQIMHQLDNPYIVRLIGVCQAEA--LMLVMEMAGGGPLHKFLVG 102
Query: 244 DEIKLDWTFRLSLLTDLVRGMRYL--HSVPHR---------------------LHELL-- 278
++ + LL + GM+YL + HR L + L
Sbjct: 103 KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162
Query: 279 ----------------WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE + R + S DV+S+G+ + E + G+
Sbjct: 163 DDSYYTARSAGKWPLKWYAPECI---NFR-KFSSRSDVWSYGVTMWEALSYGQ 211
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 58.1 bits (141), Expect = 8e-10
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
H N+ G + +V E+ GSL+ L + + + +L + GMRY
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 119 LHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAREL--LWTAPEL 176
L + +H +L +RN ++D+ V K++D+ L+ + T ++ WTAPE
Sbjct: 167 LSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 177 LRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLR 208
+ A R S DV+SFG+++ EV+ G R
Sbjct: 226 I---AFR-TFSSASDVWSFGVVMWEVLAYGER 253
Score = 38.8 bits (91), Expect = 0.002
Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 46/157 (29%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 262
++ H N+ G + +V E+ GSL+ L + + + +L +
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 263 GMRYL--HSVPHR-------------------------LHE--------------LLWTA 281
GMRYL HR L + + WTA
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
PE + A R S DV+SFG+++ EV+ GE P+
Sbjct: 223 PEAI---AFR-TFSSASDVWSFGVVMWEVLAYGERPY 255
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 58.1 bits (141), Expect = 8e-10
Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
L H ++ +G + LV ++ GSL D + Q L L+ + +GM Y
Sbjct: 72 LDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 119 LHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN---IPPRQKTAREL 169
L +H NL +RN ++ + +++ D+ + + + P +
Sbjct: 131 LEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK------- 182
Query: 170 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W A E + + + DV+S+G+ + E++
Sbjct: 183 -WMALESIHFG----KYTHQSDVWSYGVTVWELM 211
Score = 38.8 bits (91), Expect = 0.002
Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 46/160 (28%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
+ + + L H ++ +G + LV ++ GSL D + Q L L+
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 120
Query: 257 LTDLVRGMRYL--HSVPHR---------------------LHELL--------------- 278
+ +GM YL H + HR + +LL
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 279 --WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEP 316
W A E + + + DV+S+G+ + E++ G
Sbjct: 181 IKWMALESIHFG----KYTHQSDVWSYGVTVWELMTFGAE 216
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 58.5 bits (142), Expect = 9e-10
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 59 LRHENLNPFIGFLWDPTGPA-LVWEFCCRGSLEDVLVQDEIK-LDWTFRLSLLTDLVRGM 116
LRH NL +G + + G +V E+ +GSL D L L L D+ M
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 117 RYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALN-SFYDAQN---IPPRQKTARELL 170
YL HR +L +RN ++ V K++D+ L Q+ +P +
Sbjct: 303 EYLEGNNFVHR---DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-------- 351
Query: 171 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
WTAPE LR++ + S DV+SFGI++ E+
Sbjct: 352 WTAPEALREK----KFSTKSDVWSFGILLWEIY 380
Score = 40.8 bits (96), Expect = 5e-04
Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 42/155 (27%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPA-LVWEFCCRGSLEDVLVQDEIK-LDWTFRLS 255
+ E V+ LRH NL +G + + G +V E+ +GSL D L L L
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 256 LLTDLVRGMRYLHS--VPHR--------LHELL-------------------------WT 280
D+ M YL HR + E WT
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 353
Query: 281 APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
APE LR++ + S DV+SFGI++ E+ G
Sbjct: 354 APEALREK----KFSTKSDVWSFGILLWEIYSFGR 384
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 58.7 bits (142), Expect = 1e-09
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
++ H ++ IG +P ++ E C G L L + LD + L
Sbjct: 445 MRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN--IPPRQKTA 166
+ YL S +H ++ +RN ++ + +K+ D+ L +++Y A +P +
Sbjct: 503 ALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK---- 557
Query: 167 RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE + R + DV+ FG+ + E++
Sbjct: 558 ----WMAPESINFR----RFTSASDVWMFGVCMWEIL 586
Score = 39.8 bits (93), Expect = 0.001
Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 47/156 (30%)
Query: 203 VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 261
++ H ++ IG +P ++ E C G L L + LD + L
Sbjct: 444 TMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 262 RGMRYLHSVP--HR-------------------------LHE------------LLWTAP 282
+ YL S HR + + + W AP
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 283 ELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
E + R + DV+ FG+ + E+++ G PF
Sbjct: 562 ESINFR----RFTSASDVWMFGVCMWEILMHGVKPF 593
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 57.2 bits (139), Expect = 1e-09
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 59 LRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDLVRGM 116
L+H+ L +P ++ E+ GSL D L IKL L + + GM
Sbjct: 65 LQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 117 RYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE--LL---W 171
++ + +H +L + N ++ KI D+ L A+ I + TARE W
Sbjct: 123 AFIEER-NYIHRDLRAANILVSDTLSCKIADFGL-----ARLIEDNEYTAREGAKFPIKW 176
Query: 172 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
TAPE + + DV+SFGI++ E+V
Sbjct: 177 TAPEAINYG----TFTIKSDVWSFGILLTEIV 204
Score = 37.2 bits (87), Expect = 0.005
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 47/154 (30%)
Query: 203 VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDE-IKLDWTFRLSLLTDL 260
+++ L+H+ L +P ++ E+ GSL D L IKL L + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 261 VRGMRYL--HSVPHR-------------------------LHELL------------WTA 281
GM ++ + HR + + WTA
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 178
Query: 282 PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
PE + + DV+SFGI++ E+V G
Sbjct: 179 PEAINYG----TFTIKSDVWSFGILLTEIVTHGR 208
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 57.2 bits (139), Expect = 1e-09
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 56 LQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVR 114
++ L H ++ IG +P ++ E G L L +++ L + + +
Sbjct: 67 MKNLDHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 124
Query: 115 GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN--IPPRQKTA 166
M YL S+ + +H ++ RN ++ + +K+ D+ L +Y A +P +
Sbjct: 125 AMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK---- 179
Query: 167 RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W +PE + R + DV+ F + + E++
Sbjct: 180 ----WMSPESINFR----RFTTASDVWMFAVCMWEIL 208
Score = 37.2 bits (87), Expect = 0.006
Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 48/161 (29%)
Query: 199 IQEV-VLQGLRHENLNPFIG-FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
+ E +++ L H ++ IG +P ++ E G L L +++ L +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 257 LTDLVRGMRYLHSVP--HR--------LHELL---------------------------- 278
+ + M YL S+ HR +
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 279 -WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PF 317
W +PE + R + DV+ F + + E++ G+ PF
Sbjct: 179 KWMSPESINFR----RFTTASDVWMFAVCMWEILSFGKQPF 215
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 57.3 bits (139), Expect = 2e-09
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
L+ L HE++ + G D + LV E+ GSL D L + I L L +
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQIC 144
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQ 163
GM YLH+ H +H +L +RN ++D ++KI D+ L + +Y + P
Sbjct: 145 EGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF- 202
Query: 164 KTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE L++ + DV+SFG+ + E++
Sbjct: 203 -------WYAPECLKE----YKFYYASDVWSFGVTLYELL 231
Score = 38.9 bits (91), Expect = 0.002
Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 49/159 (30%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDL 260
+L+ L HE++ + G D + LV E+ GSL D L + I L L +
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQI 143
Query: 261 VRGMRYLHSVP--HR---------------------LHELL------------------W 279
GM YLH+ HR L + + W
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 203
Query: 280 TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFC 318
APE L++ + DV+SFG+ + E++ +
Sbjct: 204 YAPECLKE----YKFYYASDVWSFGVTLYELLTHCDSSQ 238
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 56.9 bits (138), Expect = 2e-09
Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 30/158 (18%)
Query: 59 LRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGM 116
L H NL G + P +V E GSL D L + + + GM
Sbjct: 78 LDHRNLIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 117 RYLHSVPHRL-HGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQKT 165
YL S R H +L +RN ++ R ++KI D+ L + Y Q +P
Sbjct: 135 GYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--- 189
Query: 166 ARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE L+ R S D + FG+ + E+
Sbjct: 190 -----WCAPESLK---TR-TFSHASDTWMFGVTLWEMF 218
Score = 37.2 bits (87), Expect = 0.005
Identities = 36/161 (22%), Positives = 49/161 (30%), Gaps = 51/161 (31%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
I+EV + L H NL G + P +V E GSL D L + +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVV---LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 256 LLTDLVRGMRYL--HSVPHR---------------------LHELL-------------- 278
+ GM YL HR L L
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 279 ----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L+ R S D + FG+ + E+ G+
Sbjct: 186 VPFAWCAPESLK---TR-TFSHASDTWMFGVTLWEMFTYGQ 222
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 57.0 bits (138), Expect = 2e-09
Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 33/168 (19%)
Query: 56 LQGLRHENLNPFIG--FLWDPTGPA----LVWEFCCRGSLEDVL-----VQDEIKLDWTF 104
++ H ++ +G G ++ F G L L ++ L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 105 RLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN 158
+ + D+ GM YL S + +H +L +RNC++ + + D+ L +Y
Sbjct: 139 LVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY---- 193
Query: 159 IPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
++ L W A E L D + DV++FG+ + E++
Sbjct: 194 ----RQGCASKLPVKWLALESLADN----LYTVHSDVWAFGVTMWEIM 233
Score = 33.8 bits (78), Expect = 0.057
Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 55/164 (33%)
Query: 203 VLQGLRHENLNPFIG--FLWDPTGPA----LVWEFCCRGSLEDVL-----VQDEIKLDWT 251
++ H ++ +G G ++ F G L L ++ L
Sbjct: 78 CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 252 FRLSLLTDLVRGMRYLHSVP--HR-------------------------LHE-------- 276
+ + D+ GM YL S HR ++
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 277 --LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
L W A E L D + DV++FG+ + E++ RG+
Sbjct: 198 ASKLPVKWLALESLADN----LYTVHSDVWAFGVTMWEIMTRGQ 237
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 56.5 bits (137), Expect = 3e-09
Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 27/161 (16%)
Query: 56 LQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV 113
+ L H++L G D LV EF GSL+ L +++ ++ ++L + L
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDEN--ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLA 123
Query: 114 RGMRYLHSVPHRLHGNLTSRNCVIDARW--------VLKITDYALN-SFYDAQN--IPPR 162
M +L +HGN+ ++N ++ +K++D ++ +
Sbjct: 124 AAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 163 QKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W PE + + + D +SFG + E+
Sbjct: 183 --------WVPPECI---ENPKNLNLATDKWSFGTTLWEIC 212
Score = 37.3 bits (87), Expect = 0.004
Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 49/157 (31%)
Query: 203 VLQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDL 260
++ L H++L G D LV EF GSL+ L +++ ++ ++L + L
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDEN--ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 261 VRGMRYL--HSVPHR----------------LHELL------------------------ 278
M +L +++ H
Sbjct: 123 AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W PE + + + D +SFG + E+ G+
Sbjct: 183 WVPPECI---ENPKNLNLATDKWSFGTTLWEICSGGD 216
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 56.0 bits (136), Expect = 5e-09
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL--VQDEIKLDWTFRLSLLTDLVRGM 116
+HENL +GF D LV+ + GSL D L + L W R + G+
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 117 RYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT---- 172
+LH H +H ++ S N ++D + KI+D+ L A+ +T + +
Sbjct: 147 NFLHE-NHHIHRDIKSANILLDEAFTAKISDFGL-----ARASEKFAQTV---MTSRIVG 197
Query: 173 -----APELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
APE LR S D+YSFG+++ E++
Sbjct: 198 TTAYMAPEALR--GEITPKS---DIYSFGVVLLEII 228
Score = 51.8 bits (125), Expect = 1e-07
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 199 IQEVVLQG-LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL--VQDEIKLDWTFRLS 255
QE+ + +HENL +GF D LV+ + GSL D L + L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 256 LLTDLVRGMRYLH--SVPHR 273
+ G+ +LH HR
Sbjct: 138 IAQGAANGINFLHENHHIHR 157
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 55.8 bits (135), Expect = 5e-09
Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 32/167 (19%)
Query: 56 LQGLRHENLNPFIG--FLWDPTGPALVW---EFCCRGSLEDVL-----VQDEIKLDWTFR 105
++ H N+ +G G F G L L +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 106 LSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQNI 159
L + D+ GM YL + + LH +L +RNC++ + + D+ L +Y
Sbjct: 150 LKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY----- 203
Query: 160 PPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
++ + W A E L D + DV++FG+ + E+
Sbjct: 204 ---RQGRIAKMPVKWIAIESLADR----VYTSKSDVWAFGVTMWEIA 243
Score = 33.8 bits (78), Expect = 0.066
Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 56/164 (34%)
Query: 203 VLQGLRHENLNPFIG--FLWDPTGPALVW---EFCCRGSLEDVL-----VQDEIKLDWTF 252
++ H N+ +G G F G L L +
Sbjct: 89 CMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQT 148
Query: 253 RLSLLTDLVRGMRYLHS---VPHR-------------------------LHE-------- 276
L + D+ GM YL + + HR ++
Sbjct: 149 LLKFMVDIALGMEYLSNRNFL-HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 277 --LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
+ W A E L D + DV++FG+ + E+ RG
Sbjct: 208 IAKMPVKWIAIESLADR----VYTSKSDVWAFGVTMWEIATRGM 247
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 55.7 bits (135), Expect = 6e-09
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 38/169 (22%)
Query: 60 RHENLNPFIGFLWDPTGPALV-WEFCCRGSLEDVL------VQDEIKLDWTFRLSLLT-- 110
H N+ +G P GP +V EFC G+L L LT
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 111 DLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQ 157
L+ +GM +L S +H +L +RN ++ + V+KI D+ L + Y
Sbjct: 149 HLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY--- 204
Query: 158 NIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+ L W APE + D + + DV+SFG+++ E+
Sbjct: 205 -----VRKGDARLPLKWMAPETIFDRVY----TIQSDVWSFGVLLWEIF 244
Score = 30.3 bits (69), Expect = 0.75
Identities = 35/164 (21%), Positives = 53/164 (32%), Gaps = 60/164 (36%)
Query: 208 RHENLNPFIGFLWDPTGPALV-WEFCCRGSLEDVL------VQDEIKLDWTFRLSLLT-- 258
H N+ +G P GP +V EFC G+L L LT
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 259 DLV-------RGMRYLHS--VPHR-------------------------LHE-------- 276
L+ +GM +L S HR +++
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 277 --LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
L W APE + D + + DV+SFG+++ E+ G
Sbjct: 209 DARLPLKWMAPETIFDRVY----TIQSDVWSFGVLLWEIFSLGA 248
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 54.9 bits (133), Expect = 1e-08
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL---VQDEIKLDWTFRLSLLTDLVRG 115
H NL GF PT LV+ + GS+ L + + LDW R + RG
Sbjct: 84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 143
Query: 116 MRYLH--SVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQN--IPPRQK-TARELL 170
+ YLH P +H ++ + N ++D + + D+ L D ++ + + T +
Sbjct: 144 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT---IG 200
Query: 171 WTAPELLRDEAHRLRG--SQPGDVYSFGIIIQEVV 203
APE L G S+ DV+ +G+++ E++
Sbjct: 201 HIAPEYL------STGKSSEKTDVFGYGVMLLELI 229
Score = 47.6 bits (114), Expect = 3e-06
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 42/153 (27%)
Query: 201 EV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL---VQDEIKLDWTFRLSL 256
EV ++ H NL GF PT LV+ + GS+ L + + LDW R +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 257 LTDLVRGMRYLH--SVPHRLHE-------LL---WT--------APELLRDEAH---RLR 293
RG+ YLH P +H LL + A + + H +R
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 294 G---------------SQPGDVYSFGIIIQEVV 311
G S+ DV+ +G+++ E++
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 229
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 54.6 bits (132), Expect = 1e-08
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 59 LRHENLNPFIGF-LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMR 117
L + + IG + LV E G L L Q+ + + L+ + GM+
Sbjct: 75 LDNPYIVRMIGICEAES--WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMK 131
Query: 118 YLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL-------NSFYDAQN---IPPRQKTAR 167
YL + +H +L +RN ++ + KI+D+ L ++Y AQ P +
Sbjct: 132 YLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----- 185
Query: 168 ELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
W APE + + + S DV+SFG+++ E
Sbjct: 186 ---WYAPECI---NYY-KFSSKSDVWSFGVLMWEAF 214
Score = 33.8 bits (78), Expect = 0.072
Identities = 35/161 (21%), Positives = 56/161 (34%), Gaps = 52/161 (32%)
Query: 199 IQEV-VLQGLRHENLNPFIGF-LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
+ E V+Q L + + IG + LV E G L L Q+ + + L
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAES--WMLVMEMAELGPLNKYLQQNR-HVKDKNIIEL 122
Query: 257 LTDLVRGMRYL---HSVPHR---------------------LHELL-------------- 278
+ + GM+YL + V HR L + L
Sbjct: 123 VHQVSMGMKYLEESNFV-HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 279 ----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE + + + S DV+SFG+++ E G+
Sbjct: 182 WPVKWYAPECI---NYY-KFSSKSDVWSFGVLMWEAFSYGQ 218
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 54.7 bits (131), Expect = 3e-08
Identities = 69/406 (16%), Positives = 126/406 (31%), Gaps = 143/406 (35%)
Query: 29 DLVQMKPVPL-HGN---TIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTG-------P 77
D +P+ L HG+ + + + S QLQ F L +PT P
Sbjct: 2 DAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQ-------EQFNKILPEPTEGFAADDEP 54
Query: 78 ALVWEFCCR--GSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYL-----HSVPHRLHGNL 130
E + G + ++ ++ LT+ YL H++ +L
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFEN--CYLEGNDIHALAAKLLQE- 111
Query: 131 TSRNCVIDARWVLKITDYALNSFYDAQNI--PPRQKTARELLWTAPELLRDEAHRLR--- 185
+ ++ + ++K ++ A+ + P K + L+ A + + +L
Sbjct: 112 -NDTTLVKTKELIK-------NYITARIMAKRPFDKKSNSALFRA---VGEGNAQLVAIF 160
Query: 186 GSQPGDVYSFGIIIQEVVLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGS--LEDVLVQ 243
G Q G + + LR L+ T LV + + L + L++
Sbjct: 161 GGQ-------GNT--DDYFEELRD---------LYQ-TYHVLVGDLIKFSAETLSE-LIR 200
Query: 244 DEIKLDWTFRLSLLTDLVRGMR---------YLHSVP------------H--RLHELLWT 280
+ + F L +++ + YL S+P H +LL
Sbjct: 201 TTLDAEKVFTQGL--NILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGF 258
Query: 281 APELLRDEAHRLRG--------------SQPGDVYSF--------------GI------- 305
P LR L+G ++ SF G+
Sbjct: 259 TPGELRS---YLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYP 315
Query: 306 -------IIQEVVVRGE--PFCMLS---LTPEG--KLVRHTPQAVP 337
I+++ + E P MLS LT E V T +P
Sbjct: 316 NTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLP 361
Score = 40.4 bits (94), Expect = 0.001
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 33/135 (24%)
Query: 112 LVRGMRYL------HS-----VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQ--- 157
L R+L HS ++ +L N +A+ ++I Y D +
Sbjct: 414 LKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAK-DIQIPVYDTFDGSDLRVLS 472
Query: 158 -NIPPR---QKTARELLWTAPELLRDEA-HRLR-GSQPGDVYSFGIIIQE--------VV 203
+I R + W + +A H L G PG G++ V+
Sbjct: 473 GSISERIVDCIIRLPVKW--ETTTQFKATHILDFG--PGGASGLGVLTHRNKDGTGVRVI 528
Query: 204 LQGLRHENLNPFIGF 218
+ G N + GF
Sbjct: 529 VAGTLDINPDDDYGF 543
Score = 36.6 bits (84), Expect = 0.013
Identities = 41/231 (17%), Positives = 68/231 (29%), Gaps = 110/231 (47%)
Query: 153 FYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVY---SFGIIIQEVVLQGLRH 209
Y K A+++ W + A D + ++G I ++V+
Sbjct: 1635 LYK------TSKAAQDV-W-------NRA---------DNHFKDTYGFSILDIVIN---- 1667
Query: 210 ENLNP------FIGFLWDPTG-------PALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
NP F G G A+++E G L+ + EI +
Sbjct: 1668 ---NPVNLTIHFGG----EKGKRIRENYSAMIFETIVDGKLKTEKIFKEI----NEHSTS 1716
Query: 257 LTDLVRGMRYLHSVPHRLHELL----WTAP----------ELLRDE---------A-HRL 292
T + LL +T P E L+ + A H L
Sbjct: 1717 YT-------FRSE-----KGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSL 1764
Query: 293 RG-----SQPGDVYSF----------GIIIQEVVVRGE----PFCMLSLTP 324
G + DV S G+ +Q V R E + M+++ P
Sbjct: 1765 -GEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINP 1814
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 53.4 bits (129), Expect = 3e-08
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 37/167 (22%)
Query: 60 RHENLNPFIGFLWDPTGPALV-WEFCCRGSLEDVL------VQDEIKLDWTFRLSLLTDL 112
+HEN+ +G GP LV E+CC G L + L ++ + + DL
Sbjct: 108 QHENIVNLLGACTH-GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 113 V-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQNI 159
+ +GM +L S + +H ++ +RN ++ V KI D+ L +S Y
Sbjct: 167 LHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY----- 220
Query: 160 PPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
L W APE + D + + DV+S+GI++ E+
Sbjct: 221 ---IVKGNARLPVKWMAPESIFDCVY----TVQSDVWSYGILLWEIF 260
Score = 27.6 bits (62), Expect = 7.1
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE + D + + DV+S+GI++ E+ G
Sbjct: 232 WMAPESIFDCVY----TVQSDVWSYGILLWEIFSLGL 264
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 53.3 bits (128), Expect = 4e-08
Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
Query: 82 EFCCRGSLEDVLVQ--DEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDA 139
+ C + +L+D + + + L + + + +LHS +H +L N
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTM 199
Query: 140 RWVLKITDY----ALNSFYDAQNIPPRQKTAREL-------LWTAPELLRDEAHRLRGSQ 188
V+K+ D+ A++ + Q + L+ +PE + + S
Sbjct: 200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY----SH 255
Query: 189 PGDVYSFGIIIQE 201
D++S G+I+ E
Sbjct: 256 KVDIFSLGLILFE 268
Score = 29.1 bits (65), Expect = 2.3
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 278 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 309
L+ +PE + + S D++S G+I+ E
Sbjct: 241 LYMSPEQIHGNNY----SHKVDIFSLGLILFE 268
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 52.6 bits (127), Expect = 5e-08
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 60 RHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL----------VQDEIKLDWTFRLS 107
H N+ +G + PT ++ E+CC G L + L ++
Sbjct: 85 NHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 108 LLTDLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIP 160
L DL+ +GM +L S + +H +L +RN ++ + KI D+ L D +N
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLA--RDIKNDS 199
Query: 161 PRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
L W APE + + + + DV+S+GI + E+
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVY----TFESDVWSYGIFLWELF 241
Score = 28.8 bits (65), Expect = 2.6
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE + + + + DV+S+GI + E+ G
Sbjct: 213 WMAPESIFNCVY----TFESDVWSYGIFLWELFSLGS 245
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 52.7 bits (127), Expect = 5e-08
Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT--DLV--- 113
++ +G + ++ E RG L+ L + L+ + ++
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 114 ----RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQNIPPRQ 163
GM YL++ +H +L +RNC++ + +KI D+ + +Y +
Sbjct: 145 GEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--------R 195
Query: 164 KTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
K + LL W +PE L+D + DV+SFG+++ E+
Sbjct: 196 KGGKGLLPVRWMSPESLKDG----VFTTYSDVWSFGVVLWEIA 234
Score = 32.3 bits (74), Expect = 0.22
Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 54/169 (31%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLT--DL 260
V++ ++ +G + ++ E RG L+ L + L+ + +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 261 V-------RGMRYLHSVP--HR-------------------------LHE---------- 276
+ GM YL++ HR ++E
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 277 LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PFCMLS 321
LL W +PE L+D + DV+SFG+++ E+ E P+ LS
Sbjct: 201 LLPVRWMSPESLKDG----VFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 51.9 bits (125), Expect = 9e-08
Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 34/193 (17%)
Query: 27 NGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLN--PFIGFLWDPTGPALV 80
+ +K V L ++++D L L+ + + +V
Sbjct: 51 KKQIYAIKYVNLEE----ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106
Query: 81 WEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHR-LHGNLTSRNCVIDA 139
E C L L + + +D R S +++ + +H H +H +L N +I
Sbjct: 107 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLIVD 162
Query: 140 RWVLKITDYALNSFYDAQNIPPRQKTARE------LLWTAPELLRDEAHRLRGSQPG--- 190
+LK+ D+ + A + P + + + + PE ++D + +
Sbjct: 163 G-MLKLIDFGI-----ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216
Query: 191 ----DVYSFGIII 199
DV+S G I+
Sbjct: 217 SPKSDVWSLGCIL 229
Score = 40.4 bits (95), Expect = 5e-04
Identities = 23/169 (13%), Positives = 48/169 (28%), Gaps = 51/169 (30%)
Query: 198 IIQEV-VLQGLRHENLN--PFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
E+ L L+ + + +V E C L L + + +D R
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERK 130
Query: 255 SLLTDLVRGMRYLHS--VPHR--------LHE---------------------------- 276
S +++ + +H + H + +
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG 190
Query: 277 -LLWTAPELLRDEAHRLRGSQPG-------DVYSFGIIIQEVVVRGEPF 317
+ + PE ++D + + DV+S G I+ + PF
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 52.0 bits (125), Expect = 1e-07
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 41/170 (24%)
Query: 60 RHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL------VQDEIKLDWTFRLSLLT- 110
+H+N+ +G P ++ E+ +G+L + L + L+
Sbjct: 133 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 111 -DLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDA 156
DLV RGM YL S +H +L +RN ++ V+KI D+ L +Y
Sbjct: 191 KDLVSCAYQVARGMEYLAS-KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-- 247
Query: 157 QNIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+KT L W APE L D + + DV+SFG+++ E+
Sbjct: 248 ------KKTTNGRLPVKWMAPEALFDRIY----THQSDVWSFGVLLWEIF 287
Score = 28.5 bits (64), Expect = 3.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L D + + DV+SFG+++ E+ G
Sbjct: 259 WMAPEALFDRIY----THQSDVWSFGVLLWEIFTLGG 291
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 51.5 bits (124), Expect = 1e-07
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 36/171 (21%)
Query: 60 RHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL-------------VQDEIKLDWTF 104
HEN+ +G L P L++E+CC G L + L +++ +L+
Sbjct: 107 SHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 105 RLSLLT--DLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYD 155
L++LT DL+ +GM +L +H +L +RN ++ V+KI D+ L D
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLA--RD 221
Query: 156 AQNIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+ L W APE L + + + DV+S+GI++ E+
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIY----TIKSDVWSYGILLWEIF 268
Score = 28.0 bits (63), Expect = 4.6
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L + + + DV+S+GI++ E+ G
Sbjct: 240 WMAPESLFEGIY----TIKSDVWSYGILLWEIFSLGV 272
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 50.9 bits (122), Expect = 2e-07
Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 44/201 (21%)
Query: 25 RYNGDLVQMKPVPLHGNTIELKS--KSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPA 78
+ GDL +K S + VD ++ L+ L H+N+ + T
Sbjct: 31 KKTGDLFAIK-------VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83
Query: 79 --LVWEFCCRGSLEDVLVQDEIKLDWTFR--LSLLTDLVRGMRYLHS--VPHR-LH-GNL 130
L+ EFC GSL VL + L +L D+V GM +L + HR + GN+
Sbjct: 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNI 143
Query: 131 TSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT--------APELLRDEAH 182
R D + V K+TD+ + E + P++
Sbjct: 144 M-RVIGEDGQSVYKLTDFGAARELEDD----------EQFVSLYGTEEYLHPDMYERAVL 192
Query: 183 RLRGSQP----GDVYSFGIII 199
R + D++S G+
Sbjct: 193 RKDHQKKYGATVDLWSIGVTF 213
Score = 43.6 bits (103), Expect = 5e-05
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFR- 253
++E VL+ L H+N+ + T L+ EFC GSL VL +
Sbjct: 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE 113
Query: 254 -LSLLTDLVRGMRYLHS--VPHR 273
L +L D+V GM +L + HR
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHR 136
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 51.1 bits (123), Expect = 2e-07
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 37/168 (22%)
Query: 60 RHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL------VQDEIKLDWTFRLSLLT--D 111
+H+N+ +G ++ E+ +G+L + L + +T D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 112 LV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQN 158
LV RGM YL S +H +L +RN ++ V+KI D+ L +Y
Sbjct: 159 LVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY---- 213
Query: 159 IPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+KT L W APE L D + + DV+SFG+++ E+
Sbjct: 214 ----KKTTNGRLPVKWMAPEALFDRVY----THQSDVWSFGVLMWEIF 253
Score = 28.4 bits (64), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L D + + DV+SFG+++ E+ G
Sbjct: 225 WMAPEALFDRVY----THQSDVWSFGVLMWEIFTLGG 257
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 50.7 bits (122), Expect = 2e-07
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 43/175 (24%)
Query: 45 LKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKL 100
LK + + + L H+++ F GF D +V E C R SL ++ + +
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK--- 110
Query: 101 DWTFRLS------LLTDLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNS 152
L+ L +V G +YLH V HR +L N ++ +KI D+ L +
Sbjct: 111 ----ALTEPEARYYLRQIVLGCQYLHRNRVIHR---DLKLGNLFLNEDLEVKIGDFGLAT 163
Query: 153 FYDAQNIPPRQKTARELLWT--------APELLRDEAHRLRGSQPGDVYSFGIII 199
+ E APE+L + H S DV+S G I+
Sbjct: 164 KVEYDG---------ERKKVLCGTPNYIAPEVLSKKGH----SFEVDVWSIGCIM 205
Score = 39.1 bits (92), Expect = 0.001
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 56/165 (33%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS- 255
+ E+ + + L H+++ F GF D +V E C R SL ++ + + L+
Sbjct: 62 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-------ALTE 114
Query: 256 -----LLTDLVRGMRYLHS--VPHR----------------------------LHELLWT 280
L +V G +YLH V HR E
Sbjct: 115 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174
Query: 281 --------APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
APE+L + H S DV+S G I+ ++V PF
Sbjct: 175 LCGTPNYIAPEVLSKKGH----SFEVDVWSIGCIMYTLLVGKPPF 215
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 50.8 bits (122), Expect = 2e-07
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 27/161 (16%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV----- 113
H+N+ IG ++ E G L+ L + + L++ DL+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM-LDLLHVARD 148
Query: 114 --RGMRYLHSVPHRLHGNLTSRNCVIDARW---VLKITDYALNSFYDAQNIPPRQ---KT 165
G +YL H +H ++ +RNC++ V KI D+ + A++I K
Sbjct: 149 IACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFGM-----ARDIYRASYYRKG 202
Query: 166 ARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+L W PE + + D +SFG+++ E+
Sbjct: 203 GCAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIF 239
Score = 30.4 bits (69), Expect = 0.85
Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 55/163 (33%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLV- 261
++ H+N+ IG ++ E G L+ L + + L++ DL+
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM-LDLLH 144
Query: 262 ------RGMRYLHS--------------VPHRLHELL----------------------- 278
G +YL + +
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 279 ------WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W PE + + D +SFG+++ E+ G
Sbjct: 205 AMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGY 243
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 50.7 bits (121), Expect = 3e-07
Identities = 23/164 (14%), Positives = 46/164 (28%), Gaps = 29/164 (17%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQ----DEIKLDWTFRLSLLTD 111
L+ F G LV E G+L + + E + +S
Sbjct: 121 LKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 112 LVRGMRYLHSVPHRLHGNLTSRNCVI-----------DARWVLKITDYALNSFYDAQNIP 160
++ + +H +HG++ N ++ D L + D S D + P
Sbjct: 181 MLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ-SI-DMKLFP 237
Query: 161 PRQKTARELLWT-----APELLRDEAHRLRGSQPGDVYSFGIII 199
E+L ++ + D + +
Sbjct: 238 KGTIFTA--KCETSGFQCVEMLSNKPW----NYQIDYFGVAATV 275
Score = 37.6 bits (87), Expect = 0.004
Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 7/86 (8%)
Query: 195 FGIIIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQ----DEIKLD 249
F I Q + L+ F G LV E G+L + + E +
Sbjct: 111 FYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 250 WTFRLSLLTDLVRGMRYLHS--VPHR 273
+S ++ + +H + H
Sbjct: 171 QGLVISFAMRMLYMIEQVHDCEIIHG 196
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 50.5 bits (121), Expect = 4e-07
Identities = 40/206 (19%), Positives = 76/206 (36%), Gaps = 24/206 (11%)
Query: 19 VVDRKARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA 78
+V + ++ V +K + + V L + H N+ + D
Sbjct: 40 IV-YRGMFDNRDVAVKRILP--ECFSFADREVQLLRES--DEHPNVIRYFCTEKDRQFQY 94
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS--VPHRLHGNLTSRNCV 136
+ E C +L++ + Q + ++LL G+ +LHS + HR +L N +
Sbjct: 95 IAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHR---DLKPHNIL 150
Query: 137 I-----DARWVLKITDYALNSFYDA--QNIPPRQKTARELLWTAPELLRDEAHRLRGSQP 189
I + I+D+ L + R W APE+L ++ +
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE-NPTYT 209
Query: 190 GDVYSFGIIIQEVVLQGLRHENLNPF 215
D++S G + V+ +G H PF
Sbjct: 210 VDIFSAGCVFYYVISEG-SH----PF 230
Score = 40.5 bits (95), Expect = 6e-04
Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 50/169 (29%)
Query: 197 IIIQEV-VLQGL-RHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRL 254
+EV +L+ H N+ + D + E C +L++ + Q + +
Sbjct: 63 FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPI 121
Query: 255 SLLTDLVRGMRYLHS--VPHR--------------------------------------- 273
+LL G+ +LHS + HR
Sbjct: 122 TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181
Query: 274 -LHELL----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+ W APE+L ++ + D++S G + V+ G
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKE-NPTYTVDIFSAGCVFYYVISEGSHP 229
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 50.0 bits (120), Expect = 4e-07
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 34/146 (23%)
Query: 79 LVWEFCCRGSLEDVL------VQDEIKLDWTFRLSLLT--DLV-------RGMRYLHSVP 123
L E+ G+L D L D S L+ L+ RGM YL
Sbjct: 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK- 161
Query: 124 HRLHGNLTSRNCVIDARWVLKITDYAL---NSFYDAQN---IPPRQKTARELLWTAPELL 177
+H +L +RN ++ +V KI D+ L Y + +P R W A E L
Sbjct: 162 QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--------WMAIESL 213
Query: 178 RDEAHRLRGSQPGDVYSFGIIIQEVV 203
+ + DV+S+G+++ E+V
Sbjct: 214 NYSVY----TTNSDVWSYGVLLWEIV 235
Score = 28.8 bits (65), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W A E L + + DV+S+G+++ E+V G
Sbjct: 207 WMAIESLNYSVY----TTNSDVWSYGVLLWEIVSLGG 239
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 50.3 bits (120), Expect = 4e-07
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 106 LSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDAQNI 159
+ + +GM +L S +H +L +RN ++ + V+KI D+ L + Y
Sbjct: 196 ICYSFQVAKGMEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY----- 249
Query: 160 PPRQKTAREL--LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
+K L W APE + D + DV+SFG+++ E+ G
Sbjct: 250 --VRKGDARLPLKWMAPETIFDR----VYTIQSDVWSFGVLLWEIFSLG 292
Score = 31.1 bits (70), Expect = 0.48
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE + D + DV+SFG+++ E+ G
Sbjct: 261 WMAPETIFDR----VYTIQSDVWSFGVLLWEIFSLGA 293
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 50.0 bits (120), Expect = 4e-07
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 43/175 (24%)
Query: 45 LKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKL 100
LK + + + L H+++ F GF D +V E C R SL ++ + +
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK--- 136
Query: 101 DWTFRLS------LLTDLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNS 152
L+ L +V G +YLH V HR +L N ++ +KI D+ L +
Sbjct: 137 ----ALTEPEARYYLRQIVLGCQYLHRNRVIHR---DLKLGNLFLNEDLEVKIGDFGLAT 189
Query: 153 FYDAQNIPPRQKTARELLWT--------APELLRDEAHRLRGSQPGDVYSFGIII 199
+ E APE+L + H S DV+S G I+
Sbjct: 190 KVEYDG---------ERKKVLCGTPNYIAPEVLSKKGH----SFEVDVWSIGCIM 231
Score = 39.6 bits (93), Expect = 0.001
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 56/165 (33%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS- 255
+ E+ + + L H+++ F GF D +V E C R SL ++ + + L+
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-------ALTE 140
Query: 256 -----LLTDLVRGMRYLHS--VPHR----------------------------LHELLWT 280
L +V G +YLH V HR E
Sbjct: 141 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200
Query: 281 --------APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
APE+L + H S DV+S G I+ ++V PF
Sbjct: 201 LCGTPNYIAPEVLSKKGH----SFEVDVWSIGCIMYTLLVGKPPF 241
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 49.7 bits (119), Expect = 6e-07
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 25/160 (15%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL----VQDEIKLDWTFR--LSLLTDL 112
H+N+ IG ++ E G L+ L + L + D+
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 113 VRGMRYLHSVPHRLHGNLTSRNCVIDARW---VLKITDYALNSFYDAQNIPPRQ---KTA 166
G +YL H +H ++ +RNC++ V KI D+ + A++I K
Sbjct: 191 ACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFGM-----ARDIYRAGYYRKGG 244
Query: 167 RELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+L W PE + + D +SFG+++ E+
Sbjct: 245 CAMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIF 280
Score = 29.3 bits (66), Expect = 1.9
Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 55/163 (33%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL----VQDEIKLDWTFR--LSL 256
++ H+N+ IG ++ E G L+ L + L +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 257 LTDLVRGMRYL---HSVPHR----------------------------LHE--------- 276
D+ G +YL H + HR ++
Sbjct: 187 ARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 277 -LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
+L W PE + + D +SFG+++ E+ G
Sbjct: 246 AMLPVKWMPPEAFMEG----IFTSKTDTWSFGVLLWEIFSLGY 284
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 49.5 bits (118), Expect = 8e-07
Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 44/201 (21%)
Query: 25 RYNGDLVQMKPVPLHGNTIELKS--KSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPA 78
+ GDL +K S + VD ++ L+ L H+N+ + T
Sbjct: 31 KKTGDLFAIK-------VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83
Query: 79 --LVWEFCCRGSLEDVLVQDEIKLDWTFR--LSLLTDLVRGMRYLHS--VPHR-LH-GNL 130
L+ EFC GSL VL + L +L D+V GM +L + HR + GN+
Sbjct: 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNI 143
Query: 131 TSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT--------APELLRDEAH 182
R D + V K+TD+ + E + P++
Sbjct: 144 M-RVIGEDGQSVYKLTDFGAARELEDD----------EQFVSLYGTEEYLHPDMYERAVL 192
Query: 183 RLRGSQP----GDVYSFGIII 199
R + D++S G+
Sbjct: 193 RKDHQKKYGATVDLWSIGVTF 213
Score = 41.8 bits (98), Expect = 2e-04
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPA--LVWEFCCRGSLEDVLVQDEIKLDWTFR- 253
++E VL+ L H+N+ + T L+ EFC GSL VL +
Sbjct: 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE 113
Query: 254 -LSLLTDLVRGMRYLHS--VPHR 273
L +L D+V GM +L + HR
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHR 136
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 48.9 bits (117), Expect = 8e-07
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 38/189 (20%)
Query: 43 IELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPA-------------LVWEFCC 85
I + + +L L L H+ + + + + E+C
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 86 RGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVL 143
G+L D++ + + L ++ + Y+HS + HR +L N ID +
Sbjct: 99 NGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHR---DLKPMNIFIDESRNV 155
Query: 144 KITDYAL-----NSFYDAQNIPPRQKTARELL--------WTAPELLRDEAHRLRGSQPG 190
KI D+ L S + + + L + A E+L H ++
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY---NEKI 212
Query: 191 DVYSFGIII 199
D+YS GII
Sbjct: 213 DMYSLGIIF 221
Score = 37.3 bits (87), Expect = 0.006
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 16/92 (17%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPA-------------LVWEFCCRGSLEDVLVQ 243
I+ EV +L L H+ + + + + E+C G+L D++
Sbjct: 49 ILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS 108
Query: 244 DEIKLDWTFRLSLLTDLVRGMRYLHS--VPHR 273
+ + L ++ + Y+HS + HR
Sbjct: 109 ENLNQQRDEYWRLFRQILEALSYIHSQGIIHR 140
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 48.9 bits (117), Expect = 1e-06
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 41/170 (24%)
Query: 60 RHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL-------VQDEIKLDWTFRLSL-L 109
+H+N+ +G P ++ E+ +G+L + L ++ ++ +
Sbjct: 145 KHKNIINLLGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 110 TDLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYDA 156
DLV RGM YL S +H +L +RN ++ V+KI D+ L +Y
Sbjct: 203 KDLVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY-- 259
Query: 157 QNIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+KT L W APE L D + + DV+SFG+++ E+
Sbjct: 260 ------KKTTNGRLPVKWMAPEALFDRVY----THQSDVWSFGVLMWEIF 299
Score = 28.1 bits (63), Expect = 4.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W APE L D + + DV+SFG+++ E+ G
Sbjct: 271 WMAPEALFDRVY----THQSDVWSFGVLMWEIFTLGG 303
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 48.5 bits (116), Expect = 1e-06
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 22/135 (16%)
Query: 82 EFCCRGSLEDVLVQDEIK--LDWTFRLSLLTDLVRGMRYLHS--VPHRLHGNLTSRNCVI 137
+ C + +L+D + + + L + + + +LHS + HR +L N
Sbjct: 95 QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHR---DLKPSNIFF 151
Query: 138 DARWVLKITDY----ALNSFYDAQNIPPRQKTAREL-------LWTAPELLRDEAHRLRG 186
V+K+ D+ A++ + Q + L+ +PE + ++
Sbjct: 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY---- 207
Query: 187 SQPGDVYSFGIIIQE 201
S D++S G+I+ E
Sbjct: 208 SHKVDIFSLGLILFE 222
Score = 33.9 bits (78), Expect = 0.064
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 17/93 (18%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPA------------LVWEFCCRGSLEDVLVQD 244
+++EV L L H + + + + + C + +L+D +
Sbjct: 50 VMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR 109
Query: 245 EIK--LDWTFRLSLLTDLVRGMRYLHS--VPHR 273
+ + L + + + +LHS + HR
Sbjct: 110 CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHR 142
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 48.8 bits (117), Expect = 1e-06
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 49/182 (26%)
Query: 56 LQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL---------------VQDEI 98
L+ + H ++ G P L+ E+ GSL L ++
Sbjct: 80 LKQVNHPHVIKLYGACSQDGP--LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 99 KLDWTFRLSL-LTDLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL 150
LD +L + DL+ +GM+YL + +H +L +RN ++ +KI+D+ L
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 151 ------NSFYDAQNIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
Y K ++ + W A E L D + + DV+SFG+++ E
Sbjct: 197 SRDVYEEDSY--------VKRSQGRIPVKWMAIESLFDHIY----TTQSDVWSFGVLLWE 244
Query: 202 VV 203
+V
Sbjct: 245 IV 246
Score = 28.4 bits (64), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE 315
W A E L D + + DV+SFG+++ E+V G
Sbjct: 218 WMAIESLFDHIY----TTQSDVWSFGVLLWEIVTLGG 250
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 48.4 bits (116), Expect = 1e-06
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 41/171 (23%)
Query: 59 LRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL-------- 108
L+H N+ +G P ++++ +C G L + LV D
Sbjct: 69 LQHPNVVCLLGVVTKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 109 LTDLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYD 155
D V GM YL S H +H +L +RN ++ + +KI+D L +Y
Sbjct: 127 PPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 156 AQN---IPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+P R W APE + + S D++S+G+++ EV
Sbjct: 186 LLGNSLLPIR--------WMAPEAIMYG----KFSIDSDIWSYGVVLWEVF 224
Score = 28.3 bits (64), Expect = 3.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PFCMLS 321
W APE + + S D++S+G+++ EV G P+C S
Sbjct: 196 WMAPEAIMYG----KFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 235
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 48.3 bits (116), Expect = 1e-06
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 26/151 (17%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRY 118
L+H ++ + D LV E C G + L + ++ GM Y
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 119 LHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT---- 172
LHS + HR +LT N ++ +KI D+ L + + E +T
Sbjct: 128 LHSHGILHR---DLTLSNLLLTRNMNIKIADFGLATQLKMPH---------EKHYTLCGT 175
Query: 173 ----APELLRDEAHRLRGSQPGDVYSFGIII 199
+PE+ AH DV+S G +
Sbjct: 176 PNYISPEIATRSAH----GLESDVWSLGCMF 202
Score = 38.7 bits (91), Expect = 0.001
Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 43/159 (27%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL 256
+ EV + L+H ++ + D LV E C G + L
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF 117
Query: 257 LTDLVRGMRYLHS--VPHR----------------------------LHELLWT------ 280
+ ++ GM YLHS + HR HE +T
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN 177
Query: 281 --APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
+PE+ AH DV+S G + +++ PF
Sbjct: 178 YISPEIATRSAH----GLESDVWSLGCMFYTLLIGRPPF 212
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 48.4 bits (116), Expect = 1e-06
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 41/171 (23%)
Query: 59 LRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSL-------- 108
L+HE++ F G DP +V+E+ G L L
Sbjct: 74 LQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 109 LTDLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL------NSFYD 155
L+ ++ GM YL S H +H +L +RNC++ A ++KI D+ + +Y
Sbjct: 132 LSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 156 AQN---IPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
+P R W PE + + + DV+SFG+I+ E+
Sbjct: 191 VGGHTMLPIR--------WMPPESIMYR----KFTTESDVWSFGVILWEIF 229
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 48.4 bits (116), Expect = 1e-06
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 30/165 (18%)
Query: 59 LRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL-----VQDEIKLDWTFRLSLLT--D 111
L+H+++ F G + +V+E+ G L L + L
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 112 LV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQ- 163
L+ GM YL + H +H +L +RNC++ V+KI D+ + +++I
Sbjct: 160 LLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGM-----SRDIYSTDY 213
Query: 164 --KTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVV 203
R +L W PE + + + DV+SFG+++ E+
Sbjct: 214 YRVGGRTMLPIRWMPPESILYR----KFTTESDVWSFGVVLWEIF 254
Score = 27.3 bits (61), Expect = 8.3
Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 61/175 (34%)
Query: 203 VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVL-----VQDEIKLDWTFRLSLL 257
+L L+H+++ F G + +V+E+ G L L + L
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 258 T--DLV-------RGMRYLHS---VPHR-------------------------LHE---- 276
L+ GM YL V HR ++
Sbjct: 156 GLGQLLAVASQVAAGMVYLAGLHFV-HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 277 ------LL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PFCMLS 321
+L W PE + + + DV+SFG+++ E+ G+ P+ LS
Sbjct: 215 RVGGRTMLPIRWMPPESILYR----KFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 47.7 bits (114), Expect = 2e-06
Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 31/166 (18%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA----LVWEFCCRGSLEDVLVQ----------DEIKLD 101
+ H N+ + + G L+ F RG+L + + + D+I
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI--- 136
Query: 102 WTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPP 161
L LL + RG+ +H+ H +L N ++ + D +
Sbjct: 137 ----LWLLLGICRGLEAIHA-KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 162 RQKTARELLWT--------APELLRDEAHRLRGSQPGDVYSFGIII 199
RQ + APEL ++H + + DV+S G ++
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVID-ERTDVWSLGCVL 236
Score = 45.0 bits (107), Expect = 1e-05
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 24/93 (25%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPA----LVWEFCCRGSLEDVLVQ--------- 243
+E + + H N+ + + G L+ F RG+L + + +
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 244 -DEIKLDWTFRLSLLTDLVRGMRYLHSVP--HR 273
D+I L LL + RG+ +H+ HR
Sbjct: 133 EDQI-------LWLLLGICRGLEAIHAKGYAHR 158
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 47.3 bits (113), Expect = 3e-06
Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 36/212 (16%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPA 78
+ + +G ++ K + + L+ L+ L+H N+ + + D T
Sbjct: 26 RRKSDGKILVWKELDYGS----MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81
Query: 79 L--VWEFCCRGSLEDVLV---QDEIKLDWTFRLSLLTDLVRGMRYLHSVPHR----LHGN 129
L V E+C G L V+ ++ LD F L ++T L ++ H LH +
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 130 LTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT----APELLRDEAHRLR 185
L N +D + +K+ D+ L A+ + A+ + T +PE + ++
Sbjct: 142 LKPANVFLDGKQNVKLGDFGL-----ARILNHDTSFAKTFVGTPYYMSPEQMNRMSY--- 193
Query: 186 GSQPGDVYSFGIIIQEVVLQGLRHENLNPFIG 217
++ D++S G ++ E L L PF
Sbjct: 194 -NEKSDIWSLGCLLYE--LCALMP----PFTA 218
Score = 34.5 bits (80), Expect = 0.038
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPAL--VWEFCCRGSLEDVLV---QDEIKLDWT 251
++ EV +L+ L+H N+ + + D T L V E+C G L V+ ++ LD
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 252 FRLSLLTDLVRGMRYLHSVPHRLHELL 278
F L ++T L ++ H H +L
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVL 138
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 46.5 bits (111), Expect = 4e-06
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 29/189 (15%)
Query: 23 KARYN--GDLVQMKPVPL-HGNTIELKSKSVDHLLQLQGLRHENLNPFIG-FLWDPTGPA 78
KA+ G L K + +E ++ L H + +G + D
Sbjct: 37 KAKNKETGALAAAKVIETKSEEELEDYIVEIEIL---ATCDHPYIVKLLGAYYHDGK--- 90
Query: 79 LVW---EFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNC 135
+W EFC G+++ ++++ + L + ++ + +LHS +H +L + N
Sbjct: 91 -LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNV 148
Query: 136 VIDARWVLKITDYALNSFYDAQNIPPRQK------TARELLWTAPELLRDEAHRLRG-SQ 188
++ +++ D+ A+N+ QK T W APE++ E +
Sbjct: 149 LMTLEGDIRLADFG----VSAKNLKTLQKRDSFIGTP---YWMAPEVVMCETMKDTPYDY 201
Query: 189 PGDVYSFGI 197
D++S GI
Sbjct: 202 KADIWSLGI 210
Score = 43.5 bits (103), Expect = 5e-05
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 198 IIQEV-VLQGLRHENLNPFIG-FLWDPTGPALVW---EFCCRGSLEDVLVQDEIKLDWTF 252
I E+ +L H + +G + D +W EFC G+++ ++++ + L
Sbjct: 63 YIVEIEILATCDHPYIVKLLGAYYHDGK----LWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 253 RLSLLTDLVRGMRYLHS--VPHR 273
+ ++ + +LHS + HR
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHR 141
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 45.8 bits (109), Expect = 8e-06
Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 36/193 (18%)
Query: 23 KARYN--GDLVQMKPVPL-HGNTIELKSKSVDHLLQLQGLRHENLNPFIG------FLWD 73
AR G V +K + L EL V + + +H N+ LW
Sbjct: 63 LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM---RDYQHFNVVEMYKSYLVGEELW- 118
Query: 74 PTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSR 133
++ EF G+L D++ +++L+ ++ +++ + YLH+ +H ++ S
Sbjct: 119 -----VLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHA-QGVIHRDIKSD 170
Query: 134 NCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL-----WTAPELLRDEAHRLRGSQ 188
+ ++ +K++D+ + AQ K R+ L W APE++ +
Sbjct: 171 SILLTLDGRVKLSDFG----FCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATE--- 221
Query: 189 PGDVYSFGIIIQE 201
D++S GI++ E
Sbjct: 222 -VDIWSLGIMVIE 233
Score = 38.9 bits (91), Expect = 0.002
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 197 IIIQEV-VLQGLRHENLNPFIG------FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLD 249
++ EV +++ +H N+ LW ++ EF G+L D++ +++L+
Sbjct: 88 LLFNEVVIMRDYQHFNVVEMYKSYLVGEELW------VLMEFLQGGALTDIV--SQVRLN 139
Query: 250 WTFRLSLLTDLVRGMRYLHS--VPHR 273
++ +++ + YLH+ V HR
Sbjct: 140 EEQIATVCEAVLQALAYLHAQGVIHR 165
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 46.1 bits (109), Expect = 8e-06
Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 58/207 (28%)
Query: 23 KARY--NGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIGF------ 70
ARY G+ V ++ + L ++ V L + H N+ P+
Sbjct: 45 LARYKPTGEYVTVRRINLE----ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100
Query: 71 LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LLTDLVRGMRYLHSVPH 124
LW +V F GS +D+ I + ++ +L +++ + Y+H +
Sbjct: 101 LW------VVTSFMAYGSAKDL-----ICTHFMDGMNELAIAYILQGVLKALDYIHHM-G 148
Query: 125 RLHGNLTSRNCVIDARWVLKITDYALN-SFYDAQNIPPRQKTARELL--------WTAPE 175
+H ++ + + +I + ++ N S RQ+ + W +PE
Sbjct: 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ---RQRVVHDFPKYSVKVLPWLSPE 205
Query: 176 LLRDEAHRLRGSQPG-----DVYSFGI 197
+L+ G D+YS GI
Sbjct: 206 VLQQNLQ-------GYDAKSDIYSVGI 225
Score = 41.4 bits (97), Expect = 3e-04
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 26/91 (28%)
Query: 198 IIQEV-VLQGLRHENLNPFIGF------LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDW 250
+ E+ V + H N+ P+ LW +V F GS +D+ I +
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELW------VVTSFMAYGSAKDL-----ICTHF 121
Query: 251 TFRLS------LLTDLVRGMRYLHS--VPHR 273
++ +L +++ + Y+H HR
Sbjct: 122 MDGMNELAIAYILQGVLKALDYIHHMGYVHR 152
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 45.7 bits (109), Expect = 9e-06
Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 28/171 (16%)
Query: 39 HGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLV-QDE 97
H N + + + L+ + EFC +G+LE + +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLF------IQMEFCDKGTLEQWIEKRRG 116
Query: 98 IKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDY----ALNSF 153
KLD L L + +G+ Y+HS ++ +L N + +KI D+ +L +
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHS-KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 154 YDAQNI---PPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
+ +PE + + + + D+Y+ G+I+ E
Sbjct: 176 GKRTRSKGTL---------RYMSPEQISSQDY----GKEVDLYALGLILAE 213
Score = 36.9 bits (86), Expect = 0.006
Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 59/175 (33%)
Query: 198 IIQEV-VLQGLRHEN----LNPFIGFLWDPTGPA------------LVWEFCCRGSLEDV 240
+EV L L H N + GF +DP + + EFC +G+LE
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 241 LV-QDEIKLDWTFRLSLLTDLVRGMRYLHS--VPHR--------LHE------------- 276
+ + KLD L L + +G+ Y+HS + +R L +
Sbjct: 111 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 277 --------------LLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
L + +PE + + + + D+Y+ G+I+ E++ +
Sbjct: 171 SLKNDGKRTRSKGTLRYMSPEQISSQDY----GKEVDLYALGLILAELLHVCDTA 221
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 45.8 bits (109), Expect = 1e-05
Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 56 LQGLRHENLNPFIG------FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLL 109
+Q ++ + G LW +V E+C GS+ D++ L ++L
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLW------IVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 110 TDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK----- 164
++G+ YLH + ++H ++ + N +++ K+ D+ Q K
Sbjct: 132 QSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFG----VAGQLTDTMAKRNTVI 186
Query: 165 -TARELLWTAPELLRDEAHRLRGSQPGDVYSFGI 197
T W APE++++ + D++S GI
Sbjct: 187 GTP---FWMAPEVIQEIGYNCV----ADIWSLGI 213
Score = 43.5 bits (103), Expect = 6e-05
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 198 IIQEV-VLQGLRHENLNPFIG------FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDW 250
II+E+ ++Q ++ + G LW +V E+C GS+ D++ L
Sbjct: 71 IIKEISIMQQCDSPHVVKYYGSYFKNTDLW------IVMEYCGAGSVSDIIRLRNKTLTE 124
Query: 251 TFRLSLLTDLVRGMRYLHS--VPHR 273
++L ++G+ YLH HR
Sbjct: 125 DEIATILQSTLKGLEYLHFMRKIHR 149
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 44.6 bits (106), Expect = 2e-05
Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 33/190 (17%)
Query: 27 NGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWE 82
N + +K +P S+ L + + L+H+N+ ++G + + E
Sbjct: 46 NQVRIAIKEIPER------DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99
Query: 83 FCCRGSLEDVLVQDEIKLDWTFRL--SLLTDLVRGMRYLHS--VPHR-LHGNLTSRNCVI 137
GSL +L L + ++ G++YLH + HR + G+ N +I
Sbjct: 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGD----NVLI 155
Query: 138 DARW-VLKITDYALNSFYDAQNIPPRQKTAREL----LWTAPELLRDEAHRLRG-SQPGD 191
+ VLKI+D F ++ + + APE++ RG + D
Sbjct: 156 NTYSGVLKISD-----FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGP---RGYGKAAD 207
Query: 192 VYSFGIIIQE 201
++S G I E
Sbjct: 208 IWSLGCTIIE 217
Score = 40.7 bits (96), Expect = 4e-04
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRL-- 254
+ +E+ + + L+H+N+ ++G + + E GSL +L L +
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 255 SLLTDLVRGMRYLHS--VPHR 273
++ G++YLH + HR
Sbjct: 126 FYTKQILEGLKYLHDNQIVHR 146
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 45.2 bits (107), Expect = 2e-05
Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 29/205 (14%)
Query: 19 VVDRKARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA 78
V + + G V +K + + + ++ + L + H N+ +
Sbjct: 30 TVVFQGSFQGRPVAVKRMLI--DFCDIALMEIKLLTES--DDHPNVIRYYCSETTDRFLY 85
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LLTDLVRGMRYLHS--VPHR----- 125
+ E C +L+D++ + + LL + G+ +LHS + HR
Sbjct: 86 IALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQ 144
Query: 126 -----LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAREL---LWTAPELL 177
T+ + I+D+ L D+ R W APELL
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204
Query: 178 RDEAHRLRGSQPG---DVYSFGIII 199
+ + + D++S G +
Sbjct: 205 EESNNLQTKRRLTRSIDIFSMGCVF 229
Score = 31.3 bits (71), Expect = 0.48
Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 195 FGIIIQEV-VLQGL-RHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTF 252
I + E+ +L H N+ + + E C +L+D++ + +
Sbjct: 52 CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLK 110
Query: 253 RLS------LLTDLVRGMRYLHS--VPHR 273
LL + G+ +LHS + HR
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHR 139
Score = 30.5 bits (69), Expect = 0.80
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 279 WTAPELLRDEAHRLRGSQPG---DVYSFGIIIQEVVVRGE-PF 317
W APELL + + + D++S G + ++ +G+ PF
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 44.6 bits (106), Expect = 2e-05
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 23 KARY--NGDLVQMKPVPL-HGNTIELKSKSVDHLLQLQGLRHENLNPFIG------FLWD 73
A G V ++ + L EL + + + ++ N+ ++ LW
Sbjct: 38 TAMDVATGQEVAIRQMNLQQQPKKELIINEILVM---RENKNPNIVNYLDSYLVGDELW- 93
Query: 74 PTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSR 133
+V E+ GSL DV+ + + ++ + ++ + +LHS +H ++ S
Sbjct: 94 -----VVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHSN-QVIHRDIKSD 145
Query: 134 NCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELL-----WTAPELLRDEAHRLRGSQ 188
N ++ +K+TD+ + AQ P + K R + W APE++ +A+ +
Sbjct: 146 NILLGMDGSVKLTDFG----FCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPK--- 196
Query: 189 PGDVYSFGIIIQEVV 203
D++S GI+ E++
Sbjct: 197 -VDIWSLGIMAIEMI 210
Score = 38.8 bits (91), Expect = 0.002
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 197 IIIQEV-VLQGLRHENLNPFIG------FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLD 249
+II E+ V++ ++ N+ ++ LW +V E+ GSL DV+ + +
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELW------VVMEYLAGGSLTDVVTETCMDEG 116
Query: 250 WTFRLSLLTDLVRGMRYLHS--VPHR 273
++ + ++ + +LHS V HR
Sbjct: 117 QI--AAVCRECLQALEFLHSNQVIHR 140
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 44.6 bits (106), Expect = 2e-05
Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 49/182 (26%)
Query: 56 LQGLRHENLNPFIG--FLWDPTGPALVWEFCCRGSLEDVL--------------VQDEIK 99
+ + N+ +G + P L++E+ G L + L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 100 LDWTFRLSLLT--DLV-------RGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYAL 150
+ L+ + + GM YL +H +L +RNC++ V+KI D+ L
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 151 ------NSFYDAQNIPPRQKTARELL---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
+Y + + + W PE + R + DV+++G+++ E
Sbjct: 221 SRNIYSADYY--------KADGNDAIPIRWMPPESIFYN----RYTTESDVWAYGVVLWE 268
Query: 202 VV 203
+
Sbjct: 269 IF 270
Score = 27.3 bits (61), Expect = 8.2
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 279 WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGE-PFCMLS 321
W PE + R + DV+++G+++ E+ G P+ ++
Sbjct: 242 WMPPESIFYN----RYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 45.1 bits (106), Expect = 2e-05
Identities = 45/181 (24%), Positives = 63/181 (34%), Gaps = 42/181 (23%)
Query: 44 ELKSKSVDHLLQ----LQGLRHEN---LNPFI---GFLWDPTGPALVWEFCCRGSLEDVL 93
EL K+ + ++ L H N L P L E+C G L L
Sbjct: 50 ELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109
Query: 94 VQDE--IKLDWTFRLSLLTDLVRGMRYLHS--VPHRLHGNLTSRNCVIDA---RWVLKIT 146
Q E L +LL+D+ +RYLH + HR +L N V+ R + KI
Sbjct: 110 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR---DLKPENIVLQPGPQRLIHKII 166
Query: 147 DYALNSFYDAQNIPPRQKTARELLWT--------APELLRDEAHRLRGSQPGDVYSFGII 198
D D EL APELL + + + D +SFG +
Sbjct: 167 DLGYAKELDQG----------ELCTEFVGTLQYLAPELLEQKKY----TVTVDYWSFGTL 212
Query: 199 I 199
Sbjct: 213 A 213
Score = 40.1 bits (93), Expect = 0.001
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 198 IIQEV-VLQGLRHEN---LNPFI---GFLWDPTGPALVWEFCCRGSLEDVLVQDE--IKL 248
E+ +++ L H N L P L E+C G L L Q E L
Sbjct: 59 WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL 118
Query: 249 DWTFRLSLLTDLVRGMRYLHS--VPHR 273
+LL+D+ +RYLH + HR
Sbjct: 119 KEGPIRTLLSDISSALRYLHENRIIHR 145
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.8 bits (105), Expect = 4e-05
Identities = 57/376 (15%), Positives = 102/376 (27%), Gaps = 114/376 (30%)
Query: 45 LKSKSVDHLLQ----LQGLRH------------------ENLNPFIGFLW--------DP 74
L + +DH++ + G E L FL P
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 75 TGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPH-RLHG----- 128
+ ++ R L + Q K + + RL L + + L + + G
Sbjct: 106 SMMTRMYIE-QRDRLYND-NQVFAKYNVS-RLQPYLKLRQALLELRPAKNVLIDGVLGSG 162
Query: 129 -----NLTSRNCVIDAR------WVLKITDY--------ALNSFYDAQNIPPRQKTAREL 169
+ + + W L + + L I P + +
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFW-LNLKNCNSPETVLEMLQKLL--YQIDPNWTSRSDH 219
Query: 170 LWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPFIGFLWDPTGPALVW 229
+ LR Y +++ L + + + W
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLV-------LLN---------VQNAK----AW 259
Query: 230 E---FCCR-------GSLEDVL---VQDEIKLDWTFRLSLLTDLVRGM--RYLHSVPHRL 274
C+ + D L I LD ++L D V+ + +YL P L
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLD-HHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 275 -HELLWTAP-------ELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEP------FCML 320
E+L T P E +RD + + II+ + EP F L
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 321 SLTPEGKLVRHTPQAV 336
S+ P + P +
Sbjct: 379 SVFPPSAHI---PTIL 391
Score = 39.1 bits (90), Expect = 0.002
Identities = 41/283 (14%), Positives = 76/283 (26%), Gaps = 111/283 (39%)
Query: 32 QMKPVPLHGNTIELKSKSVDHLLQLQG-------LRHENLNPFIGFLWDPTGPALVWE-- 82
+ L ++I+ + + LL+ + L + + + W
Sbjct: 219 HSSNIKLRIHSIQAELR---RLLKSKPYENCLLVLLN---------VQNAK----AWNAF 262
Query: 83 -FCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLH-SVPHRLHGNLTSRNCVIDAR 140
C+ +L+ T R +TD + H S+ H LT
Sbjct: 263 NLSCK-----ILL--------TTRFKQVTDFLSAATTTHISLDHHSMT-LT--------- 299
Query: 141 WVLKITDYALNSFYDAQNIPPRQKTARELLWTAP-------ELLRDEAHRLRGSQPGDVY 193
D + + P Q RE+L T P E +RD + +
Sbjct: 300 -----PDEVKSLLLKYLDCRP-QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 194 SFGIIIQEVVLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFR 253
II+ + L P E+ R +
Sbjct: 354 KLTTIIESSL------NVLEPA--------------EY--RKMFDR-------------- 377
Query: 254 LSLLTDLVRGMRYLHSVPHRLHELLWTA-----PELLRDEAHR 291
LS+ +P L L+W ++ ++ H+
Sbjct: 378 LSVFPPSAH-------IPTILLSLIWFDVIKSDVMVVVNKLHK 413
Score = 32.5 bits (73), Expect = 0.22
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 35/136 (25%)
Query: 225 PALVWEFCCRG---SLEDVLVQDEIK--------------LDWTFRLSLLTDLVRGMRYL 267
A V F C+ + +L ++EI L WT ++V+ +++
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ-EEMVQ--KFV 83
Query: 268 HSVPHRLHELLWTA-------PELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF--- 317
V ++ L + P ++ R D F + V R +P+
Sbjct: 84 EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF---AKYNVSRLQPYLKL 140
Query: 318 --CMLSLTPEGKLVRH 331
+L L P ++
Sbjct: 141 RQALLELRPAKNVLID 156
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 42.6 bits (101), Expect = 9e-05
Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 41/211 (19%)
Query: 11 DSSQYDVNVVDRKARYNGDLVQMKPVPLHGNTIELKSKSVDHLLQ--------LQGLRHE 62
D++ Y + V+ +K +P P ++ L+ L H
Sbjct: 37 DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96
Query: 63 NLNPFIGFLWDPTGPAL--VWEFCCRGSLEDVLVQDEIKLDWT---FRLSLLTDLVRGMR 117
N+ + L DP L V+E +G + +V + D F+ DL++G+
Sbjct: 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ-----DLIKGIE 151
Query: 118 YLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT--- 172
YLH + HR ++ N ++ +KI D+ +++ + + LL
Sbjct: 152 YLHYQKIIHR---DIKPSNLLVGEDGHIKIADFGVSNEFKGSD---------ALLSNTVG 199
Query: 173 -----APELLRDEAHRLRGSQPGDVYSFGII 198
APE L + G DV++ G+
Sbjct: 200 TPAFMAPESLSETRKIFSGK-ALDVWAMGVT 229
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 41.8 bits (99), Expect = 2e-04
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 23 KAR--YNGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPA-- 78
KAR G V +K V + ++ + LQ L+HEN+ I P
Sbjct: 35 KARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94
Query: 79 ------LVWEFCC---RGSLEDVLVQ---DEIKLDWTFRLSLLTDLVRGMRYLHSVPHR- 125
LV++FC G L +VLV+ EIK ++ L+ G+ Y+H ++
Sbjct: 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNGLYYIHR--NKI 145
Query: 126 LHGNLTSRNCVIDARWVLKITDYAL-NSFYDAQNIPPRQKTAREL-LW-TAPELL 177
LH ++ + N +I VLK+ D+ L +F A+N P + T R + LW PELL
Sbjct: 146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL 200
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 40.6 bits (96), Expect = 4e-04
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED---VLVQDEIKLDWTFRLSLL 109
L+ L+H+N+ L LV+EFC + + L + +K S L
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-------SFL 107
Query: 110 TDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
L++G+ + HS LH +L +N +I+ LK+ ++ L + IP R +A
Sbjct: 108 FQLLKGLGFCHS--RNVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEV 162
Query: 169 L-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
+ LW P++L S D++S G I E+ G
Sbjct: 163 VTLWYRPPDVLFGAKLY---STSIDMWSAGCIFAELANAG 199
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 40.4 bits (95), Expect = 5e-04
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 23 KARY--NGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIG-FLWDPTGPA- 78
K R+ G L +K + + G+ E + ++ L + H N+ + G F+
Sbjct: 42 KGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNIATYYGAFIKKNPPGMD 99
Query: 79 ----LVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LLTDLVRGMRYLHSVPHRLHG 128
LV EFC GS+ D+ IK L + +++RG+ +LH +H
Sbjct: 100 DQLWLVMEFCGAGSVTDL-----IKNTKGNTLKEEWIAYICREILRGLSHLHQ-HKVIHR 153
Query: 129 NLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK------TARELLWTAPELLRDEAH 182
++ +N ++ +K+ D+ ++ AQ + T W APE++ + +
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVS----AQLDRTVGRRNTFIGTP---YWMAPEVIACDEN 206
Query: 183 RLRG-SQPGDVYSFGI 197
D++S GI
Sbjct: 207 PDATYDFKSDLWSLGI 222
Score = 33.1 bits (76), Expect = 0.11
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 21/93 (22%)
Query: 197 IIIQE--VVLQGLRHENLNPFIG-FLWDPTGPA-----LVWEFCCRGSLEDVLVQDEIKL 248
I QE ++ + H N+ + G F+ LV EFC GS+ D+ IK
Sbjct: 66 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL-----IKN 120
Query: 249 DWTFRLS------LLTDLVRGMRYLHS--VPHR 273
L + +++RG+ +LH V HR
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLHQHKVIHR 153
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 40.4 bits (95), Expect = 5e-04
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIG-FLWDPT 75
K N +V +K + L E ++ + Q L + + G +L D
Sbjct: 40 KGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK 94
Query: 76 GPALVW---EFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTS 132
+W E+ GS D+L + ++L ++++G+ YLHS ++H ++ +
Sbjct: 95 ----LWIIMEYLGGGSALDLLEPGPLDETQI--ATILREILKGLDYLHSE-KKIHRDIKA 147
Query: 133 RNCVIDARWVLKITDYALNSFYDAQNIPPRQK------TARELLWTAPELLRDEAHRLRG 186
N ++ +K+ D+ + Q + K T W APE+++ A+ +
Sbjct: 148 ANVLLSEHGEVKLADFGVA----GQLTDTQIKRNTFVGTP---FWMAPEVIKQSAYDSK- 199
Query: 187 SQPGDVYSFGI 197
D++S GI
Sbjct: 200 ---ADIWSLGI 207
Score = 38.8 bits (91), Expect = 0.002
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 198 IIQEV-VLQGLRHENLNPFIG-FLWDPTGPALVW---EFCCRGSLEDVLVQDEIKLDWTF 252
I QE+ VL + + G +L D +W E+ GS D+L +
Sbjct: 67 IQQEITVLSQCDSPYVTKYYGSYLKDTK----LWIIMEYLGGGSALDLLEPGPLDETQI- 121
Query: 253 RLSLLTDLVRGMRYLHS--VPHR 273
++L ++++G+ YLHS HR
Sbjct: 122 -ATILREILKGLDYLHSEKKIHR 143
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 40.4 bits (95), Expect = 5e-04
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 40/199 (20%)
Query: 23 KARY--NGDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIG-F----- 70
A + V +K + L E S+D LL+ + H N+ + F
Sbjct: 33 AAYCAPKKEKVAIKRINL-----EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87
Query: 71 LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRL-------SLLTDLVRGMRYLHSVP 123
LW LV + GS+ D++ K + + ++L +++ G+ YLH
Sbjct: 88 LW------LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN- 140
Query: 124 HRLHGNLTSRNCVIDARWVLKITDY----ALNSFYDAQNIPPRQKTARELLWTAPELLRD 179
++H ++ + N ++ ++I D+ L + D R+ W APE++
Sbjct: 141 GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM-- 198
Query: 180 EAHRLRG-SQPGDVYSFGI 197
++RG D++SFGI
Sbjct: 199 --EQVRGYDFKADIWSFGI 215
Score = 36.9 bits (86), Expect = 0.006
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 22/92 (23%)
Query: 198 IIQEV-VLQGLRHENLNPFIG-F-----LWDPTGPALVWEFCCRGSLEDVLVQDEIKLDW 250
+++E+ + H N+ + F LW LV + GS+ D++ K +
Sbjct: 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDELW------LVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 251 TFRL-------SLLTDLVRGMRYLHS--VPHR 273
+ ++L +++ G+ YLH HR
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 40.2 bits (95), Expect = 6e-04
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED---VLVQDEIKLDWTFRLSLL 109
L+ L H N+ I + LV+EF + L++ L +IK L
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIK-------IYL 125
Query: 110 TDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
L+RG+ + H HR LH +L +N +I++ LK+ D+ L + IP R T
Sbjct: 126 YQLLRGVAHCHQ--HRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEV 180
Query: 169 L-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ LW AP++L S D++S G I E++
Sbjct: 181 VTLWYRAPDVLMGSKKY---STSVDIWSIGCIFAEMIT 215
Score = 27.1 bits (61), Expect = 7.8
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 199 IQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED---VLVQDEIKLDWT 251
I+E+ +L+ L H N+ I + LV+EF + L++ L +IK
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIK---- 122
Query: 252 FRLSLLTDLVRGMRYLHS--VPHR 273
L L+RG+ + H + HR
Sbjct: 123 ---IYLYQLLRGVAHCHQHRILHR 143
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 39.8 bits (94), Expect = 7e-04
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED---VLVQDEIKLDWTFRLSLL 109
L+ L+H N+ + LV+E + L+ L K S L
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-------SFL 106
Query: 110 TDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
L+ G+ Y H R LH +L +N +I+ LKI D+ L + IP R+ T
Sbjct: 107 LQLLNGIAYCHD--RRVLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEI 161
Query: 169 L-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ LW AP++L S D++S G I E+V
Sbjct: 162 VTLWYRAPDVLMGSKKY---STTIDIWSVGCIFAEMVN 196
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 39.6 bits (92), Expect = 0.001
Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 7/113 (6%)
Query: 87 GSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKIT 146
S D + L L+R L S +HG+ T N I L +
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGHFTPDNLFIMPDGRLMLG 236
Query: 147 DYALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIII 199
D + R + + AP A + + + G+ I
Sbjct: 237 D-----VSALWKVGTRGPASSVPVTYAPREFL-NASTATFTHALNAWQLGLSI 283
Score = 28.5 bits (63), Expect = 3.1
Identities = 25/202 (12%), Positives = 45/202 (22%), Gaps = 48/202 (23%)
Query: 175 ELLRDEAH---RLRGSQPGDVYS-FGIIIQEVVLQGLRHENLNPFIGFLWDPTGPALVWE 230
E L + RL G P + +++ + D +
Sbjct: 107 ERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLL 166
Query: 231 F-CCRGSLEDV------LVQDEIKLDWTFRLSLLTDLVRGMRYLHS--VPHR-------- 273
LE + + L L+R L S + H
Sbjct: 167 MPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLF 226
Query: 274 -----------------LHELLWT--------APELLRDEAHRLRGSQPGDVYSFGIIIQ 308
+ E L A + + + G+ I
Sbjct: 227 IMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLN--ASTATFTHALNAWQLGLSIY 284
Query: 309 EVVVRGEPFCMLSLTPEGKLVR 330
V PF +++ +G R
Sbjct: 285 RVWCLFLPFGLVTPGIKGSWKR 306
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 39.1 bits (92), Expect = 0.001
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED---VLVQDEIKLDWTFRLSLL 109
L+ L+H N+ + LV+E+ + L+D ++ +K L
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK-------LFL 106
Query: 110 TDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
L+RG+ Y H + LH +L +N +I+ R LK+ D+ L +IP +
Sbjct: 107 FQLLRGLAYCHR--QKVLHRDLKPQNLLINERGELKLADFGLARAK---SIPTKTYDNEV 161
Query: 169 L-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ LW P++L S D++ G I E+
Sbjct: 162 VTLWYRPPDILLGSTDY---STQIDMWGVGCIFYEMAT 196
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 39.0 bits (92), Expect = 0.001
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLEDV----LVQDEIKLDWTFRLSL 108
L+ L H N+ + + LV+EF + ++ + IK S
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-------SY 108
Query: 109 LTDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAR 167
L L++G+ + HS HR LH +L +N +I+ +K+ D+ L + +P R T
Sbjct: 109 LFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHE 163
Query: 168 EL-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ LW APE+L + S D++S G I E+V
Sbjct: 164 VVTLWYRAPEILLGAKYY---STAVDIWSLGCIFAEMVT 199
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 38.7 bits (90), Expect = 0.002
Identities = 33/193 (17%), Positives = 74/193 (38%), Gaps = 29/193 (15%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQ----LQGLRHENLNPFIG-FLWDPT 75
K + G ++ K + L +++ L + F G F D
Sbjct: 51 KVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECNSPYIVGFYGAFYSDGE 105
Query: 76 GPALVW---EFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTS 132
+ E GSL+ VL + ++ + +++G+ YL +H ++
Sbjct: 106 ----ISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 133 RNCVIDARWVLKITDYALNSFYDAQNIPPRQKT-ARELLWTAPELLRDEAHRLRGSQPGD 191
N ++++R +K+ D+ ++ Q I + + +PE L+ + S D
Sbjct: 161 SNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY----SVQSD 212
Query: 192 VYSFGIIIQEVVL 204
++S G+ + E+ +
Sbjct: 213 IWSMGLSLVEMAV 225
Score = 33.3 bits (76), Expect = 0.10
Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 52/161 (32%)
Query: 198 IIQEV-VLQGLRHENLNPFIG-FLWDPTGPALVW---EFCCRGSLEDVLVQDEIKLDWTF 252
II+E+ VL + F G F D + E GSL+ VL + ++
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGE----ISICMEHMDGGSLDQVL-KKAGRIPEQI 132
Query: 253 RLSLLTDLVRGMRYLHSVPHRLH-------------------------ELL--------- 278
+ +++G+ YL +H +L+
Sbjct: 133 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192
Query: 279 ---WTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEP 316
+ +PE L+ + S D++S G+ + E+ V G
Sbjct: 193 TRSYMSPERLQGTHY----SVQSDIWSMGLSLVEMAV-GRY 228
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 38.7 bits (91), Expect = 0.002
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCC---RGSLED---VLVQDEIKLDWTFRLSLL 109
LQ L H N+ + + +LV++F ++D VL IK + +
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIK-------AYM 118
Query: 110 TDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
++G+ YLH H LH +L N ++D VLK+ D+ L + P R T +
Sbjct: 119 LMTLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYTHQV 173
Query: 169 L-LW-TAPELL 177
+ W APELL
Sbjct: 174 VTRWYRAPELL 184
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 38.9 bits (90), Expect = 0.002
Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 15/120 (12%)
Query: 87 GSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRL-HGNLTSRNCVIDARWVLKI 145
L + L RL L ++R + LH + L H L + V+D R + +
Sbjct: 196 EVLLSHSSTHK-SLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPVDIVLDQRGGVFL 252
Query: 146 TDYALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPG------DVYSFGIII 199
T F + + PE + P D ++ G+ I
Sbjct: 253 TG-----FEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307
Score = 27.7 bits (61), Expect = 7.0
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 279 WTAPELLR-DEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
TA +L + H + D ++ G+ I + P
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 38.1 bits (88), Expect = 0.003
Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 87 GSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKIT 146
L + L RL L ++R + LH +H L + V+D R + +T
Sbjct: 191 EVLLSHSSTHK-SLVHHARLQLTLQVIRLLASLHHY-GLVHTYLRPVDIVLDQRGGVFLT 248
Query: 147 DYALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRGSQPG-------DVYSFGIII 199
F R ++ + PEL A D ++ G++I
Sbjct: 249 G-----FEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 37.8 bits (88), Expect = 0.003
Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 25/199 (12%)
Query: 23 KARYNGDLVQMKPVPLHGNTIELKSKS-VDHLLQLQGLRHENLNPFIGFLWDPTGPA--- 78
+ +G +K + + V + +L G H N+ F +
Sbjct: 48 QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSG--HPNIVQFCSAASIGKEESDTG 105
Query: 79 ----LVWEFCCRGSLEDVLVQDEIKLDWTFR--LSLLTDLVRGMRYLHS-VPHRLHGNLT 131
L+ C+G L + L + E + + L + R ++++H P +H +L
Sbjct: 106 QAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLK 165
Query: 132 SRNCVIDARWVLKITDY---ALNSFYDAQNIPPRQKTARELLWT--------APELLRDE 180
N ++ + +K+ D+ S Y + +++ E T PE++ D
Sbjct: 166 VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DL 224
Query: 181 AHRLRGSQPGDVYSFGIII 199
+ D+++ G I+
Sbjct: 225 YSNFPIGEKQDIWALGCIL 243
Score = 32.0 bits (73), Expect = 0.28
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 15/91 (16%)
Query: 198 IIQEV-VLQGLR-HENLNPFIGFLWDPTGPA-------LVWEFCCRGSLEDVLVQDEIKL 248
IIQEV ++ L H N+ F + L+ C+G L + L + E +
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 249 DWTFR--LSLLTDLVRGMRYLHS----VPHR 273
+ L + R ++++H + HR
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHR 162
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 37.3 bits (87), Expect = 0.005
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 23/193 (11%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALV 80
K + G ++ +K + + E K +D + ++ + F G L+ +
Sbjct: 40 KMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99
Query: 81 WEFCCRGSLEDVLVQDEIKLDWTFRLSLL----TDLVRGMRYLHSVPHRLHGNLTSRNCV 136
E S + LD +L V+ + +L +H ++ N +
Sbjct: 100 MELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNIL 158
Query: 137 IDARWVLKITD-----YALNSFYDAQNI--PPRQKTARELLWTAPELLRDEAHRLRGSQP 189
+D +K+ D ++S ++ P + APE + A R
Sbjct: 159 LDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP---------YMAPERIDPSASRQGYDVR 209
Query: 190 GDVYSFGIIIQEV 202
DV+S GI + E+
Sbjct: 210 SDVWSLGITLYEL 222
Score = 30.4 bits (69), Expect = 0.92
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 198 IIQE--VVLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
++ + VV++ + F G L+ + E S + LD
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEE 125
Query: 256 LL----TDLVRGMRYLHS---VPHR 273
+L V+ + +L + HR
Sbjct: 126 ILGKITLATVKALNHLKENLKIIHR 150
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 37.2 bits (87), Expect = 0.005
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 28/140 (20%)
Query: 53 LLQLQGLRHEN----LNPFIGFLWDPTGPA-LVWEFC---CRGSLEDV----LVQDEIKL 100
L +L+ H N ++ D LV+E R L+ L + IK
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK- 123
Query: 101 DWTFRLSLLTDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNI 159
L+ +RG+ +LH+ + +H +L N ++ + +K+ D+ L Y
Sbjct: 124 ------DLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARIYS---- 171
Query: 160 PPRQKTAREL-LW-TAPELL 177
T + LW APE+L
Sbjct: 172 YQMALTPVVVTLWYRAPEVL 191
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 37.2 bits (87), Expect = 0.006
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC-----------CRGSLEDVLVQDEIKLDWTF 104
++ L+HEN+ + LV+EF G+ L + +K
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK----- 111
Query: 105 RLSLLTDLVRGMRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQ 163
L++G+ + H ++ LH +L +N +I+ R LK+ D+ L + IP
Sbjct: 112 --YFQWQLLQGLAFCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNT 164
Query: 164 KTAREL-LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
++ + LW AP++L S D++S G I+ E++
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTY---STSIDIWSCGCILAEMIT 204
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 36.9 bits (86), Expect = 0.006
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 37/145 (25%)
Query: 82 EFCCRGSLEDVLVQDEIKLDWTFR----LSLLTDLVRGMRYLHS--VPHR---------- 125
E+C GSL D + + ++ F+ LL + RG+RY+HS + H
Sbjct: 91 EYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149
Query: 126 ------LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIP---PRQKTARELLWTAPEL 176
+ + + KI D + + + R + A E+
Sbjct: 150 RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR--------FLANEV 201
Query: 177 LRDEAHRLRGSQPGDVYSFGIIIQE 201
L++ L + D+++ + +
Sbjct: 202 LQENYTHLPKA---DIFALALTVVC 223
Score = 32.3 bits (74), Expect = 0.19
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 21/90 (23%)
Query: 198 IIQEV--VLQGLRHENLNPFIG------FLWDPTGPALVWEFCCRGSLEDVLVQDEIKLD 249
++EV +H ++ + + + E+C GSL D + + ++
Sbjct: 57 ALREVYAHAVLGQHSHVVRYFSAWAEDDHML------IQNEYCNGGSLADAI-SENYRIM 109
Query: 250 WTFR----LSLLTDLVRGMRYLHS--VPHR 273
F+ LL + RG+RY+HS + H
Sbjct: 110 SYFKEAELKDLLLQVGRGLRYIHSMSLVHM 139
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 36.8 bits (86), Expect = 0.007
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 36/145 (24%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLTD- 111
L+ +HEN+ I +++ P F +V ++Q+ + L +L+D
Sbjct: 63 LKHFKHENI---IT-IFNIQRPDSFENF------NEVYIIQELMQTDLHRVISTQMLSDD 112
Query: 112 --------LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPP 161
+R ++ LH V HR +L N +I++ LK+ D+ L D
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVIHR---DLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 162 RQKTARELLWT---------APELL 177
+ T ++ APE++
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVM 194
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 36.6 bits (85), Expect = 0.008
Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 18/180 (10%)
Query: 27 NGDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALVWEFCCR 86
G +K + L+ V+ L+ GL + P G + + + E
Sbjct: 82 TGFQCAVK-------KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134
Query: 87 GSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCVIDAR-WVLKI 145
GSL L++ L L L + G+ YLH+ LHG++ + N ++ + +
Sbjct: 135 GSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAAL 192
Query: 146 TDYALNSFYDAQNIPPRQKTARELL----WTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
D+ + T + APE++ + D++S ++
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC----DAKVDIWSSCCMMLH 248
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 36.4 bits (85), Expect = 0.009
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LL 109
+ L HEN+ F G + L E+C G L D + D +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFF 111
Query: 110 TDLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAR 167
L+ G+ YLH + HR ++ N ++D R LKI+D+ L + + R
Sbjct: 112 HQLMAGVVYLHGIGITHR---DIKPENLLLDERDNLKISDFGLATVF-------RYNNRE 161
Query: 168 ELLWT--------APELLRDEAHRLRGSQPGDVYSFGII 198
LL APELL+ ++P DV+S GI+
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFH---AEPVDVWSCGIV 197
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 36.2 bits (84), Expect = 0.012
Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 36/158 (22%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGS-LEDVLVQ----DEIKLDWTFRLSLLT 110
L + H N+ + + LV E G L + + DE + FR
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR----- 137
Query: 111 DLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARE 168
LV + YL + HR ++ N VI + +K+ D+ ++ +
Sbjct: 138 QLVSAVGYLRLKDIIHR---DIKDENIVIAEDFTIKLIDFGSAAYL----------ERGK 184
Query: 169 LLWT--------APELLRDEAHRLRGSQPGDVYSFGII 198
L +T APE+L + RG + +++S G+
Sbjct: 185 LFYTFCGTIEYCAPEVLMGNPY--RGPE-LEMWSLGVT 219
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 35.8 bits (83), Expect = 0.015
Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 34/197 (17%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIG-FLWDPTGPAL 79
K R+ G ++ +K + GN E K +D + L+ + G F+ +
Sbjct: 43 KMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD---- 98
Query: 80 VW---EFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLTSRNCV 136
V+ E E + + + + + +V+ + YL +H ++ N +
Sbjct: 99 VFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL 157
Query: 137 IDARWVLKITDY----------ALNSFYDAQNIPPRQKTARELLWTAPELLRDEAHRLRG 186
+D R +K+ D+ A + + APE +
Sbjct: 158 LDERGQIKLCDFGISGRLVDDKAKDRSAGCAA------------YMAPERIDPPDPTKPD 205
Query: 187 -SQPGDVYSFGIIIQEV 202
DV+S GI + E+
Sbjct: 206 YDIRADVWSLGISLVEL 222
Score = 27.3 bits (61), Expect = 6.9
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 51/164 (31%)
Query: 198 IIQE--VVLQGLRHENLNPFIG-FLWDPTGPALVW---EFCCRGSLEDVLVQDEIKLDWT 251
I+ + VVL+ + G F+ + V+ E E + + + +
Sbjct: 70 ILMDLDVVLKSHDCPYIVQCFGTFITNTD----VFIAMELMG-TCAEKLKKRMQGPIPER 124
Query: 252 FRLSLLTDLVRGMRYLHSVPHRLH-------------------------ELL-------- 278
+ +V+ + YL +H L+
Sbjct: 125 ILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184
Query: 279 -----WTAPELLRDEAHRLRG-SQPGDVYSFGIIIQEVVVRGEP 316
+ APE + DV+S GI + E+ G+
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT-GQF 227
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 35.4 bits (82), Expect = 0.020
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LL 109
+ L HEN+ F G + L E+C G L D + D +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-------GMPEPDAQRFF 111
Query: 110 TDLVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAR 167
L+ G+ YLH + HR ++ N ++D R LKI+D+ L + + R
Sbjct: 112 HQLMAGVVYLHGIGITHR---DIKPENLLLDERDNLKISDFGLATVF-------RYNNRE 161
Query: 168 ELLWT--------APELLRDEAHRLRGSQPGDVYSFGII 198
LL APELL+ ++P DV+S GI+
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFH---AEPVDVWSCGIV 197
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 35.3 bits (82), Expect = 0.021
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 9/125 (7%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRG 115
L+ LRHENL + LV+EF ++ D L LD+ L ++ G
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIING 136
Query: 116 MRYLHSVPHR-LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAREL-LW-T 172
+ + HS H +H ++ N ++ V+K+ D+ P W
Sbjct: 137 IGFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFARTL---AAPGEVYDDEVATRWYR 191
Query: 173 APELL 177
APELL
Sbjct: 192 APELL 196
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 35.0 bits (81), Expect = 0.028
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 39/136 (28%)
Query: 79 LVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LLTDLVRGMRYLHS--VPHRLHGNL 130
L+ E+ G + D LV R+ +V ++Y H + HR +L
Sbjct: 91 LIMEYASGGEVFDYLVAHG-------RMKEKEARSKFRQIVSAVQYCHQKRIVHR---DL 140
Query: 131 TSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTARELLWT--------APELLRDEAH 182
+ N ++DA +KI D+ ++ + T L APEL + + +
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEF----------TVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 183 RLRGSQPGDVYSFGII 198
G + DV+S G+I
Sbjct: 191 --DGPEV-DVWSLGVI 203
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 34.9 bits (81), Expect = 0.032
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 38/173 (21%)
Query: 56 LQGLRHENLNPFIGFL--WDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLT 110
++ L H+N+ + P+G L + L V +VQ+ E L L
Sbjct: 62 IRRLDHDNI---VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL 118
Query: 111 D---------LVRGMRYLHS--VPHR-LH-GNL--TSRNCVIDARWVLKITDYALNSFYD 155
+ L+RG++Y+HS V HR L NL + + VLKI D+ L D
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL------VLKIGDFGLARIMD 172
Query: 156 AQNIPPRQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ E L T +P LL + ++ D+++ G I E++
Sbjct: 173 PHYSHKGHLS--EGLVTKWYRSPRLLLSPNNY---TKAIDMWAAGCIFAEMLT 220
Score = 30.3 bits (69), Expect = 0.95
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 19/86 (22%)
Query: 204 LQGLRHENLNPFIGFL--WDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLT 258
++ L H+N+ + P+G L + L V +VQ+ E L L
Sbjct: 62 IRRLDHDNI---VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL 118
Query: 259 D---------LVRGMRYLHS--VPHR 273
+ L+RG++Y+HS V HR
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHR 144
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 34.5 bits (80), Expect = 0.042
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 25/135 (18%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFC---CRGSLED--VLVQDEIKLDWTFRLSLLT 110
L+ L+H N+ + L++E+ + ++ + IK S L
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIK-------SFLY 139
Query: 111 DLVRGMRYLHSVPHR-LHGNLTSRNCVIDARW-----VLKITDYALNSFYDAQNIPPRQK 164
L+ G+ + HS R LH +L +N ++ VLKI D+ L + IP RQ
Sbjct: 140 QLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF---GIPIRQF 194
Query: 165 TAREL-LW-TAPELL 177
T + LW PE+L
Sbjct: 195 THEIITLWYRPPEIL 209
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 34.2 bits (79), Expect = 0.052
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 43/176 (24%)
Query: 45 LKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKL 100
K+ + L L H N+ PT +LV E G L D +V+
Sbjct: 87 KKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG--- 143
Query: 101 DWTFRLS------LLTDLVRGMRYLHS--VPHRLHGNLTSRNCVI-----DARWVLKITD 147
S + ++ + YLH + HR +L N + DA LKI D
Sbjct: 144 ----YYSERDAADAVKQILEAVAYLHENGIVHR---DLKPENLLYATPAPDAP--LKIAD 194
Query: 148 YALNSFYDAQNIPPRQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGIII 199
+ L+ + Q + + T APE+LR A+ D++S GII
Sbjct: 195 FGLSKIVEH------QVLMKTVCGTPGYCAPEILRGCAY----GPEVDMWSVGIIT 240
Score = 28.4 bits (64), Expect = 3.6
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
Query: 197 IIIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
I+ E+ VL L H N+ PT +LV E G L D +V+ S
Sbjct: 94 IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYS 146
Query: 256 ------LLTDLVRGMRYLHS--VPHR 273
+ ++ + YLH + HR
Sbjct: 147 ERDAADAVKQILEAVAYLHENGIVHR 172
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 33.4 bits (77), Expect = 0.096
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALV 80
K R+ G ++ +K + N+ E K +D + ++ + F G L+ +
Sbjct: 25 KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84
Query: 81 WEFCCRGSLEDVLVQDEIKLDWTFRLSLLT----DLVRGMRYLHSVPHRLHGNLTSRNCV 136
E SL+ + I T +L +V+ + +LHS +H ++ N +
Sbjct: 85 MELMD-TSLDKFY-KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142
Query: 137 IDARWVLKITD-----YALNSFYDAQNI----PPRQKTARELLWTAPELLRDEAHRLRGS 187
I+A +K+ D Y ++ A++I P + APE + E ++ S
Sbjct: 143 INALGQVKMCDFGISGYLVDDV--AKDIDAGCKP---------YMAPERINPELNQKGYS 191
Query: 188 QPGDVYSFGIIIQEV 202
D++S GI + E+
Sbjct: 192 VKSDIWSLGITMIEL 206
Score = 28.0 bits (63), Expect = 5.0
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 198 IIQE--VVLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS 255
++ + + ++ + F G L+ + E SL+ + I T
Sbjct: 52 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFY-KQVIDKGQTIPED 109
Query: 256 LLT----DLVRGMRYLHSVPHRLH 275
+L +V+ + +LHS +H
Sbjct: 110 ILGKIAVSIVKALEHLHSKLSVIH 133
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 33.0 bits (76), Expect = 0.13
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 36/164 (21%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLTD- 111
L RHEN+ IG + D + + +DV +VQD E L + L++
Sbjct: 79 LLRFRHENI---IG-INDIIRAPTIEQM------KDVYIVQDLMETDLYKLLKTQHLSND 128
Query: 112 --------LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPP 161
++RG++Y+HS V HR +L N +++ LKI D+ L D +
Sbjct: 129 HICYFLYQILRGLKYIHSANVLHR---DLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 162 RQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGIIIQE 201
T E + T APE++ + ++ D++S G I+ E
Sbjct: 186 GFLT--EYVATRWYRAPEIMLNSKG---YTKSIDIWSVGCILAE 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 32.8 bits (75), Expect = 0.14
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 38/148 (25%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPA--LVWEFC--------------CRGSLEDVLVQDEIK 99
L+ L+H N+ L++++ L + +K
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 100 LDWTFRLSLLTDLVRGMRYLHSVPHR-LHGNLTSRNCVIDA----RWVLKITDYALNSFY 154
SLL ++ G+ YLH+ + LH +L N ++ R +KI D +
Sbjct: 132 -------SLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 155 DAQNIPPRQKTAREL----LW-TAPELL 177
N P + + W APELL
Sbjct: 183 ---NSPLKPLADLDPVVVTFWYRAPELL 207
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 32.3 bits (74), Expect = 0.19
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLTD- 111
L+ ++HEN+ IG L D PA E DV LV L+ + LTD
Sbjct: 82 LKHMKHENV---IG-LLDVFTPARSLE-----EFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 112 --------LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
++RG++Y+HS + HR +L N ++ LKI D+ L
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHR---DLKPSNLAVNEDCELKILDFGL 178
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 32.5 bits (74), Expect = 0.23
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLTD- 111
++ + H+N I L + P E +DV LV + + L ++ L +
Sbjct: 115 MKCVNHKN----IISLLNVFTPQKTLE-----EFQDVYLVMELMDANLCQVIQMELDHER 165
Query: 112 -------LVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQK 164
++ G+++LHS +H +L N V+ + LKI D+ L +
Sbjct: 166 MSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV 224
Query: 165 TARELLW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
R + APE++ + + D++S G I+ E+V
Sbjct: 225 VTR---YYRAPEVILGMGY----KENVDIWSVGCIMGEMVR 258
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 32.0 bits (73), Expect = 0.29
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAREL 169
++ G+++LHS + HR +L N V+ + LKI D+ L + R
Sbjct: 136 MLCGIKHLHSAGIIHR---DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR-- 190
Query: 170 LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ APE++ + + D++S G I+ E++
Sbjct: 191 -YYRAPEVILGMGY----KENVDIWSVGCIMGEMIK 221
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 31.5 bits (72), Expect = 0.39
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVID-ARWVLKITDYALNSFYDAQNIPPRQKTAR- 167
+++ + Y HS + HR ++ N +ID L++ D+ L FY P ++ R
Sbjct: 139 ILKALDYCHSMGIMHR---DVKPHNVMIDHEHRKLRLIDWGLAEFYH----PGQEYNVRV 191
Query: 168 ELLW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQG 206
+ PELL D D++S G ++ ++ +
Sbjct: 192 ASRYFKGPELLVDYQMY---DYSLDMWSLGCMLASMIFRK 228
Score = 27.2 bits (61), Expect = 8.9
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 281 APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPF 317
PELL D D++S G ++ ++ R EPF
Sbjct: 198 GPELLVDYQMY---DYSLDMWSLGCMLASMIFRKEPF 231
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 31.2 bits (71), Expect = 0.44
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 23 KARYN--GDLVQMKPVPLHGNTIELKSKSVDHLLQLQGLRHENLNPFIGFLWDPTGPALV 80
K R+ G ++ +K + N+ E K +D + ++ + F G L+ +
Sbjct: 69 KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128
Query: 81 WEFCCRGSLEDVLVQDEIKLDWTFRLSLLT----DLVRGMRYLHSVPHRLHGNLTSRNCV 136
E SL+ + I T +L +V+ + +LHS +H ++ N +
Sbjct: 129 MELMD-TSLDKFY-KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 186
Query: 137 IDARWVLKITD-----YALNSFYDAQNI--PPRQKTARELLWTAPELLRDEAHRLRGSQP 189
I+A +K+ D Y ++S + P + APE + E ++ S
Sbjct: 187 INALGQVKMCDFGISGYLVDSVAKTIDAGCKP---------YMAPERINPELNQKGYSVK 237
Query: 190 GDVYSFGIIIQEV 202
D++S GI + E+
Sbjct: 238 SDIWSLGITMIEL 250
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 30.7 bits (70), Expect = 0.62
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 47/182 (25%)
Query: 41 NTIELKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQD 96
NT +L ++ L + + L+H N+ + + + LV++ G L + +V
Sbjct: 63 NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 122
Query: 97 EIKLDWTFRLS------LLTDLVRGMRYLHS--VPHR-------LHGNLTSRNCVIDARW 141
E S + ++ + Y HS + HR L L S+ A
Sbjct: 123 E-------FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLL---LASKA--KGAA- 169
Query: 142 VLKITDYALNSFYDAQNIPPRQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGI 197
+K+ D+ L + + T +PE+L+ + + S+P D+++ G+
Sbjct: 170 -VKLADFGLAIEVND------SEAWHGFAGTPGYLSPEVLKKDPY----SKPVDIWACGV 218
Query: 198 II 199
I+
Sbjct: 219 IL 220
Score = 29.2 bits (66), Expect = 2.1
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS- 255
+ +E + + L+H N+ + + + LV++ G L + +V E S
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-------FYSE 127
Query: 256 -----LLTDLVRGMRYLHS--VPHR 273
+ ++ + Y HS + HR
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHR 152
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 30.7 bits (70), Expect = 0.65
Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 42/163 (25%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS------LL 109
+ L+H N+ + + L+++ G L + +V E S +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE-------YYSEADASHCI 116
Query: 110 TDLVRGMRYLHS--VPHR-------LHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIP 160
++ + + H V HR L L S+ A +K+ D+ L A +
Sbjct: 117 QQILEAVLHCHQMGVVHRNLKPENLL---LASKLK--GAA--VKLADFGL-----AIEVE 164
Query: 161 PRQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGIII 199
Q+ T +PE+LR + + +P D+++ G+I+
Sbjct: 165 GEQQAWFGFAGTPGYLSPEVLRKDPY----GKPVDLWACGVIL 203
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 30.8 bits (70), Expect = 0.65
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 56 LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDV-LVQD--EIKLDWTFRLSLLTD- 111
L+ +RHEN+ IG L D P + D LV L + L +
Sbjct: 78 LKHMRHENV---IG-LLDVFTPDETLD-----DFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 112 --------LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
+++G+RY+H+ + HR +L N ++ LKI D+ L
Sbjct: 129 RIQFLVYQMLKGLRYIHAAGIIHR---DLKPGNLAVNEDCELKILDFGL 174
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 30.3 bits (69), Expect = 0.78
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
+++G++Y+HS V HR +L N ++ LKI D+ L
Sbjct: 135 MLKGLKYIHSAGVVHR---DLKPGNLAVNEDCELKILDFGL 172
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 30.6 bits (69), Expect = 0.95
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 281 APELLRDEAHRLRGSQPGDVYSFGIIIQEVVVRGEPFCMLSLTPEGKLVRHTPQAVPVFQ 340
APE++R + D+Y+ G + + + G+ V P+ PV +
Sbjct: 245 APEIVRTGP-----TVATDIYTVGRTLAALTLDLPTR-------NGRYVDGLPEDDPVLK 292
Query: 341 R 341
Sbjct: 293 T 293
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 30.4 bits (69), Expect = 0.98
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
++ G+ LH V HR +L N ++ + I D+ L
Sbjct: 143 ILLGLHVLHEAGVVHR---DLHPGNILLADNNDITICDFNL 180
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 29.8 bits (68), Expect = 1.1
Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 47/178 (26%)
Query: 45 LKSKSVDHLLQ----LQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKL 100
L ++ L + + L+H N+ + + + LV++ G L + +V E
Sbjct: 44 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--- 100
Query: 101 DWTFRLS------LLTDLVRGMRYLHS--VPHR-------LHGNLTSRNCVIDARWVLKI 145
S + ++ + Y HS + HR L L S+ A +K+
Sbjct: 101 ----FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLL---LASKAK--GAA--VKL 149
Query: 146 TDYALNSFYDAQNIPPRQKTARELLWT----APELLRDEAHRLRGSQPGDVYSFGIII 199
D+ L + + T +PE+L+ + + S+P D+++ G+I+
Sbjct: 150 ADFGLAIEVND------SEAWHGFAGTPGYLSPEVLKKDPY----SKPVDIWACGVIL 197
Score = 29.1 bits (66), Expect = 2.3
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS- 255
+ +E + + L+H N+ + + + LV++ G L + +V E S
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-------FYSE 104
Query: 256 -----LLTDLVRGMRYLHS--VPHR 273
+ ++ + Y HS + HR
Sbjct: 105 ADASHCIQQILESIAYCHSNGIVHR 129
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 30.1 bits (68), Expect = 1.2
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
L+ G ++H + HR +L NC+++ +K+ D+ L
Sbjct: 138 LLLGENFIHESGIIHR---DLKPANCLLNQDCSVKVCDFGL 175
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 29.8 bits (67), Expect = 1.3
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL 150
L+ G++Y+HS + HR +L NC+++ +K+ D+ L
Sbjct: 165 LLVGVKYVHSAGILHR---DLKPANCLVNQDCSVKVCDFGL 202
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 29.3 bits (66), Expect = 1.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 112 LVRGMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTAR---- 167
+V + YLHS + ++ +L N ++D +KITD+ L + I
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFCGT 312
Query: 168 -ELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
E L APE+L D + + D + G+++ E
Sbjct: 313 PEYL--APEVLEDNDY----GRAVDWWGLGVVMYE 341
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 29.3 bits (66), Expect = 2.1
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 25/88 (28%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYAL-----------NSFYDAQN 158
L++ ++YLHS + HR ++ N +++A +K+ D+ L N+ + N
Sbjct: 118 LIKVIKYLHSGGLLHR---DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 159 IPPRQKTARELLWT---------APELL 177
+ + T APE+L
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEIL 202
>4ayb_E DNA-directed RNA polymerase; transferase, multi-subunit,
transcription; 3.20A {Sulfolobus shibatae} PDB: 2y0s_E
4b1o_E 4b1p_T 2waq_E 2wb1_E 2pmz_E 3hkz_E
Length = 180
Score = 27.9 bits (62), Expect = 4.0
Identities = 16/133 (12%), Positives = 36/133 (27%), Gaps = 10/133 (7%)
Query: 104 FRLSLLTDLVR------GMRYLHSVPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQ 157
++L +VR G + L + + D VL I + +
Sbjct: 2 YKLIKARSIVRIPPNEFGKPLNEIALNELRQQYQEK-ILKDLGLVLAILNV---KTSEEG 57
Query: 158 NIPPRQKTARELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVLQGLRHENLNPFIG 217
+ + + + V ++G+ + + GL H +
Sbjct: 58 MLVFGDGATYHEVEFDMITYVPVVQEVVEGEVLQVDNYGVFVNLGPMDGLVHISQITDDT 117
Query: 218 FLWDPTGPALVWE 230
+D + E
Sbjct: 118 LKYDNVRGIIFGE 130
>2ooc_A Histidine phosphotransferase; NP_419930.1, hypothetical protein,
structural genomics, JOIN for structural genomics, JCSG;
HET: MSE PG4; 1.52A {Caulobacter crescentus} SCOP:
a.24.10.6
Length = 113
Score = 26.9 bits (59), Expect = 4.4
Identities = 4/23 (17%), Positives = 9/23 (39%)
Query: 273 RLHELLWTAPELLRDEAHRLRGS 295
+L +D H ++G+
Sbjct: 40 LWAPMLDPTHPGWKDAVHTVKGA 62
>3iqt_A Signal transduction histidine-protein kinase BARA; histidine
phosphotransfer domain, HTP, structural genomics,
protein structure initiative; HET: MSE BTB; 1.40A
{Escherichia coli}
Length = 123
Score = 27.1 bits (60), Expect = 4.6
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 248 LDWTFRLSLL---TDLVRGM--RYLHSVPHRLHEL--LWTA--PELLRDEAHRLRGS 295
LDW L TDL R M L +P +++ PE L D H+L GS
Sbjct: 15 LDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGS 71
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription
factor, RNA polymerase recycling, activator,
ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Length = 968
Score = 28.1 bits (62), Expect = 5.1
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 266 YLHSVPHRLHELLWTAPELL-RDEAHRLRGSQPGD--VYSFGIIIQEVVVRGEPFCMLSL 322
+ RL L +LL DEAH L S+ Y I+++ +L+
Sbjct: 258 FARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQA---IEQLAEHVPGVLLLTA 314
Query: 323 TPE 325
TPE
Sbjct: 315 TPE 317
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein
biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus}
PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A*
Length = 878
Score = 28.3 bits (64), Expect = 5.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 141 WVLKITDYA 149
W L+IT YA
Sbjct: 192 WYLRITAYA 200
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics,
joint center for structural genomics, JCSG; HET: MSE
UNL; 2.32A {Haemophilus somnus 129PT}
Length = 312
Score = 27.8 bits (61), Expect = 6.0
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 72 WDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLSLLTDLVRGMRYLHSVPHRLHGNLT 131
W + E L+ + I + + ++ D + + P LHGNL
Sbjct: 159 WQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKH---NPKPSILHGNLW 215
Query: 132 SRNCVIDA 139
NC+
Sbjct: 216 IENCIQVD 223
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 27.8 bits (62), Expect = 6.2
Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDAR-WVLKITDYALNSFYDAQNIPPRQKTARE 168
L R + ++HS + HR ++ +N +++++ LK+ D+ A+ + P + +
Sbjct: 150 LFRAVGFIHSLGICHR---DIKPQNLLVNSKDNTLKLCDFGS-----AKKLIPSEPSVAY 201
Query: 169 L--LW-TAPELLRDEAHRLRGSQPGDVYSFGIIIQEVVL 204
+ + APEL+ + D++S G + E++L
Sbjct: 202 ICSRFYRAPELMLGATEY---TPSIDLWSIGCVFGELIL 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 27.3 bits (61), Expect = 7.4
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 23/102 (22%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDAR-WVLKITDYALNSFYDAQNIPPRQKTARE 168
L+R + Y+HS + HR ++ +N ++D VLK+ D+ A+ + +
Sbjct: 150 LLRSLAYIHSIGICHR---DIKPQNLLLDPPSGVLKLIDFGS-----AKILIAGEPNVSY 201
Query: 169 L--LW-TAPELLRDEAHRLRGSQ---PGDVYSFGIIIQEVVL 204
+ + APEL+ + D++S G ++ E++
Sbjct: 202 ICSRYYRAPELI------FGATNYTTNIDIWSTGCVMAELMQ 237
>3myf_A Sensor protein; HPT, histidine kinase, PSI, MCSG, structural
genomics, midwe for structural genomics, protein
structure initiative, TRAN; HET: MSE; 1.80A {Shewanella
SP}
Length = 119
Score = 26.2 bits (58), Expect = 7.4
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 248 LDWTFRLSLL---TDLVRGM--RYLHSVPHRLHEL--LWTA--PELLRDEAHRLRGS 295
L+W L+ ++L M L S+P + ++ + H+L G+
Sbjct: 6 LNWDLCLTQANHKSNLALEMLKMLLDSLPETVEKIQTALGQNDQATMLSTIHKLHGA 62
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding,
protein biosynthesis I aminoacyl-tRNA synthetase,
ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A
4ari_A* 4as1_A*
Length = 880
Score = 27.5 bits (62), Expect = 7.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 141 WVLKITDYA 149
W +KIT YA
Sbjct: 211 WFIKITAYA 219
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase;
1.90A {Thermus thermophilus}
Length = 311
Score = 27.1 bits (61), Expect = 8.3
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 275 HELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQE--VVVRGEPF 317
E + P+ ++ ++ G ++ V +RG P
Sbjct: 259 FEAVLVVPQEGAAAVEARAKAKGLPLFRAGRVVAGEGVYLRGAPL 303
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 27.4 bits (61), Expect = 8.5
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 112 LVRGMRYLHS--VPHRLHGNLTSRNCVIDARWVLKITDYALNSFYDAQNIPPRQKTA--- 166
+ G+ LH + +R +L N ++D ++I+D L A ++P Q
Sbjct: 295 ICCGLEDLHRERIVYR---DLKPENILLDDHGHIRISDLGL-----AVHVPEGQTIKGRV 346
Query: 167 --RELLWTAPELLRDEAHRLRGSQPGDVYSFGIIIQE 201
+ APE++++E + + D ++ G ++ E
Sbjct: 347 GTVGYM--APEVVKNERY----TFSPDWWALGCLLYE 377
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 27.2 bits (61), Expect = 8.9
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 16/85 (18%)
Query: 198 IIQEV-VLQGLRHENLNPFIGFLWDPTGPALVWEFCCRGSLEDVLVQDEIKLDWTFRLS- 255
I++EV +L+ L H N+ L D + +V E G L D +++ + R S
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-------RFSE 120
Query: 256 -----LLTDLVRGMRYLHS--VPHR 273
++ + G+ Y+H + HR
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHR 145
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.141 0.451
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,613,599
Number of extensions: 341363
Number of successful extensions: 1199
Number of sequences better than 10.0: 1
Number of HSP's gapped: 863
Number of HSP's successfully gapped: 355
Length of query: 349
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 255
Effective length of database: 4,077,219
Effective search space: 1039690845
Effective search space used: 1039690845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.2 bits)