RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13822
(123 letters)
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
{Trypanosome (Trypanosoma brucei), different isoform
[TaxId: 5691]}
Length = 235
Score = 93.1 bits (230), Expect = 4e-25
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 28/146 (19%)
Query: 5 PEDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYM 64
E VT+ F+DI T + A + P + D + + + I Y Y+V+T+GD++M
Sbjct: 7 KEPTDPVTLIFTDIESSTALWA-AHPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFM 65
Query: 65 VVGGLPVRIPDHADQIATMALDLLHHSGRF---------------------------KIR 97
+ P A ++ L + ++
Sbjct: 66 IASKSPFAAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVY 125
Query: 98 HLPYTPLRLRIGLHTGRPVSKHLRKK 123
+ LR+R+G+HTG +H
Sbjct: 126 SRLWNGLRVRVGIHTGLCDIRHDEVT 151
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 81.1 bits (199), Expect = 7e-21
Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 20/128 (15%)
Query: 6 EDFREVTIYFSDIVGFTTIS----AYSTPFEVVDLLNDLYTCFDATINA---YNVYKVET 58
+ + V + F+ I F E + LLN++ FD ++ V K++T
Sbjct: 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61
Query: 59 IGDAYMVVGGL-----------PVRIPDHADQIATMALDLLHHSGRFKIRHLPYTPLRLR 107
IG YM GL P R H + A L+ +LR
Sbjct: 62 IGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFN--DFKLR 119
Query: 108 IGLHTGRP 115
+G++ G
Sbjct: 120 VGINHGPV 127
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
[TaxId: 118562]}
Length = 197
Score = 74.2 bits (181), Expect = 3e-18
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Query: 5 PEDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYM 64
PE R +TI FSDIVGFT +S V +LLN+ + + +GDA M
Sbjct: 3 PEP-RLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIM 61
Query: 65 VVGGLPVRIPDHADQIATMALDL----------LHHSGRFKIRHLPYTPLRLRIGLHTGR 114
+ G P + +A R + P+R R G+H G
Sbjct: 62 ALYGAPEEMSPSEQVRRAIATARQMLVALEKLNQGWQERGLVGRNEVPPVRFRCGIHQGM 121
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
familiaris) [TaxId: 9615]}
Length = 190
Score = 67.3 bits (163), Expect = 1e-15
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 6 EDFREVTIYFSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNVYKVETIGDAYMV 65
+ V+I F+DI GFT++++ T E+V LN+L+ FD + +++ +GD Y
Sbjct: 10 QKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYC 69
Query: 66 VGGLPVRIPDHADQIATMALDLLHHSGRFKIRHLPYTPLRLRIGLHTGRP 115
V GLP DHA M +D++ + +R+G+H+GR
Sbjct: 70 VSGLPEARADHAHCCVEMGMDMIEAISLVREMTGVNV--NMRVGIHSGRV 117
>d1p42a1 d.14.1.7 (A:2-127) UDP-3-O-[3-hydroxymyristoyl]
N-acetylglucosamine deacetylase LpxC {Aquifex aeolicus
[TaxId: 63363]}
Length = 120
Score = 24.1 bits (52), Expect = 4.4
Identities = 4/10 (40%), Positives = 6/10 (60%)
Query: 108 IGLHTGRPVS 117
+G+HTG
Sbjct: 15 VGIHTGEYSK 24
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus
kandleri [TaxId: 2320]}
Length = 151
Score = 24.0 bits (52), Expect = 5.3
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 73 IPDHADQIATMALDLLHHSGR--FKIRHLPYTPLRLRIG 109
+P A+ +A A +L SG+ HL L +
Sbjct: 32 VPTMAEYVANAAKSVLDASGKKTLMEEHLKALADVLMVE 70
>d2guma1 e.76.1.1 (A:111-725) Glycoprotein B {Human herpesvirus 1
[TaxId: 10298]}
Length = 615
Score = 24.0 bits (52), Expect = 6.4
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 13 IYFSDIVGFTTISAYSTPFEVVDLLNDLYTCF-DATINAYNVYKVETIGDAY 63
+S +G A EV+D +N C A N+ D +
Sbjct: 67 HRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNLETTAFHRDDH 118
>d2dfaa1 c.6.2.5 (A:1-250) Hypothetical protein TTHB195 {Thermus
thermophilus [TaxId: 274]}
Length = 250
Score = 23.8 bits (51), Expect = 6.5
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 15 FSDIVGFTTISAYSTPFEVVDLLNDLYTCFDATINAYNV 53
F D+VGF +P EV + A + A +
Sbjct: 65 FPDLVGFGRREMALSPEEVYADVLYQIGALSAFLKAEGL 103
>d1vk9a_ c.97.1.3 (A:) Hypothetical protein TM1506 {Thermotoga
maritima [TaxId: 2336]}
Length = 147
Score = 23.2 bits (50), Expect = 9.4
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 37 LNDLYTCFDATINAYNVYKVETIGDAYMVVGGLPVRIPDHADQIATMALDLLHHSG 92
+ +L+ FD + + K+ A ++ P I HA I+ AL L++ G
Sbjct: 50 VVELFKRFDNLEGSLVIDKMVGKAAASFLLKMKPDHI--HAKVISKPALKLMNEYG 103
>d2pk7a1 b.171.1.1 (A:3-61) Uncharacterized protein PFL1779
{Pseudomonas fluorescens [TaxId: 294]}
Length = 59
Score = 22.3 bits (48), Expect = 9.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 62 AYMVVGGLPVRIPDHADQIAT 82
AY + G+PV + A + T
Sbjct: 33 AYPIRDGIPVMLESEARTLTT 53
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.143 0.434
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 506,676
Number of extensions: 22093
Number of successful extensions: 82
Number of sequences better than 10.0: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 18
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (21.9 bits)