BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13826
(173 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|47205479|emb|CAG13667.1| unnamed protein product [Tetraodon nigroviridis]
Length = 702
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/116 (75%), Positives = 101/116 (87%), Gaps = 2/116 (1%)
Query: 56 VSTSQPITRKNL--LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMP 113
+S S P TR++L +V + ++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM
Sbjct: 397 MSLSSPHTRRSLGSRGPVVRAIMTAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMA 456
Query: 114 DCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DCPHTIGVEFGTRI+EVHG+K+KLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 457 DCPHTIGVEFGTRIMEVHGQKVKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 512
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 36/40 (90%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ + ++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 415 VRAIMTAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 454
>gi|324505695|gb|ADY42443.1| Ras-related protein Rab-14 [Ascaris suum]
Length = 213
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 91/96 (94%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MSSTGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 96
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MSSTGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|312085696|ref|XP_003144782.1| RAB14 protein [Loa loa]
gi|307760054|gb|EFO19288.1| Ras-like protein Rab-14 [Loa loa]
Length = 213
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MSSNGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 95
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MSSNGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|170581209|ref|XP_001895584.1| Ras-related protein Rab-14 [Brugia malayi]
gi|158597400|gb|EDP35557.1| Ras-related protein Rab-14, putative [Brugia malayi]
Length = 213
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MSSNGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 95
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MSSNGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|391339468|ref|XP_003744071.1| PREDICTED: ras-related protein Rab-14-like [Metaseiulus
occidentalis]
Length = 214
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 90/96 (93%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MTESGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMSDCPHTIGVEFGTRIIEVAGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV DV+
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDVTR 96
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M+ SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MTESGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|301299077|gb|ADK66883.1| Rab14 [Aiptasia pulchella]
Length = 217
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 91/96 (94%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MAATGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 96
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 36/37 (97%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MAATGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|156390648|ref|XP_001635382.1| predicted protein [Nematostella vectensis]
gi|156222475|gb|EDO43319.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 91/96 (94%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MAATGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 96
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 36/37 (97%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MAATGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|339238789|ref|XP_003380949.1| GTP-binding protein yptV4 [Trichinella spiralis]
gi|316976091|gb|EFV59434.1| GTP-binding protein yptV4 [Trichinella spiralis]
Length = 180
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 91/93 (97%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++GQY+YS+IFKYIIIGDMGVGKSCLLHQFTE+KFMPDCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGQYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKFMPDCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 35/35 (100%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++GQY+YS+IFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGQYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|357612414|gb|EHJ67983.1| Rab-protein 14 [Danaus plexippus]
Length = 213
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SSG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SSGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SSG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SSGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|320168221|gb|EFW45120.1| RAB14 protein [Capsaspora owczarzaki ATCC 30864]
Length = 212
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/90 (91%), Positives = 88/90 (97%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KF+PDCPHTIGVEFGTRIIEV+G+KIKLQIW
Sbjct: 4 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFLPDCPHTIGVEFGTRIIEVNGQKIKLQIW 63
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGALMV DV+
Sbjct: 64 DTAGQERFRAVTRSYYRGAAGALMVYDVTR 93
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 4 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFL 35
>gi|195998762|ref|XP_002109249.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190587373|gb|EDV27415.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 217
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MATAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMSDCPHTIGVEFGTRIIEVAGQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALM D++
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMAYDITR 96
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 36/38 (94%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
M+++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 MATAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 38
>gi|237820631|ref|NP_001153783.1| Rab-protein 14 [Tribolium castaneum]
Length = 215
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|89258425|gb|ABD65436.1| Rab14 [Suberites domuncula]
Length = 189
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EV G+KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|383863388|ref|XP_003707163.1| PREDICTED: ras-related protein Rab-14-like [Megachile rotundata]
Length = 218
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|193211445|ref|NP_001123226.1| Rab-protein 14 [Nasonia vitripennis]
Length = 218
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|322793255|gb|EFZ16912.1| hypothetical protein SINV_14392 [Solenopsis invicta]
Length = 265
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
Query: 60 QPITRKNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTI 119
QP + V KMS+ G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTI
Sbjct: 33 QPFHCTQRRFTNVCKMST-GPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTI 91
Query: 120 GVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
GVEFGTRIIEV G+KIKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 92 GVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 141
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 49 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 83
>gi|340378920|ref|XP_003387975.1| PREDICTED: ras-related protein Rab-14-like [Amphimedon
queenslandica]
Length = 220
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EV G+KIK
Sbjct: 2 ASGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ASGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|66557450|ref|XP_397056.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Apis mellifera]
gi|340722550|ref|XP_003399667.1| PREDICTED: ras-related protein Rab-14-like [Bombus terrestris]
gi|350418542|ref|XP_003491891.1| PREDICTED: ras-related protein Rab-14-like [Bombus impatiens]
gi|380012102|ref|XP_003690127.1| PREDICTED: ras-related protein Rab-14-like [Apis florea]
Length = 218
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|389614625|dbj|BAM20348.1| ras-related protein Rab-14, partial [Papilio polytes]
Length = 162
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TSGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TSGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|390333617|ref|XP_001198666.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
gi|390369429|ref|XP_001198716.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
Length = 215
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|348536088|ref|XP_003455529.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EVHG+K+K
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|410922212|ref|XP_003974577.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EVHG+K+K
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|73535767|pdb|1Z0F|A Chain A, Gdp-Bound Rab14 Gtpase
Length = 179
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 89/95 (93%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
S++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KI
Sbjct: 5 SATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 64
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 65 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 99
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 5 SATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 40
>gi|332029969|gb|EGI69794.1| Ras-related protein Rab-14 [Acromyrmex echinatior]
Length = 218
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 STGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|405963182|gb|EKC28779.1| Ras-related protein Rab-14 [Crassostrea gigas]
Length = 214
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|291239338|ref|XP_002739577.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|443730966|gb|ELU16260.1| hypothetical protein CAPTEDRAFT_153157 [Capitella teleta]
Length = 217
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|321452621|gb|EFX63965.1| hypothetical protein DAPPUDRAFT_231914 [Daphnia pulex]
Length = 215
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALLVYDITR 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|260786308|ref|XP_002588200.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
gi|229273359|gb|EEN44211.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
Length = 215
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|198425794|ref|XP_002126763.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 214
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|241828734|ref|XP_002414734.1| RAS-related protein, putative [Ixodes scapularis]
gi|215508946|gb|EEC18399.1| RAS-related protein, putative [Ixodes scapularis]
Length = 218
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 3 ASGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIK 62
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 63 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+SG Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 3 ASGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|346469761|gb|AEO34725.1| hypothetical protein [Amblyomma maculatum]
Length = 215
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|427787413|gb|JAA59158.1| Putative ras-related protein rab-14 [Rhipicephalus pulchellus]
Length = 215
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|399163157|gb|AFP33154.1| rab-14, partial [Caenorhabditis elegans]
Length = 209
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 1 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 60
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 1 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 35
>gi|17568765|ref|NP_510572.1| Protein RAB-14 [Caenorhabditis elegans]
gi|3878422|emb|CAB01884.1| Protein RAB-14 [Caenorhabditis elegans]
Length = 210
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|449269091|gb|EMC79900.1| Ras-related protein Rab-14, partial [Columba livia]
Length = 212
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|440911197|gb|ELR60903.1| Ras-related protein Rab-14, partial [Bos grunniens mutus]
Length = 218
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 89/98 (90%)
Query: 73 SKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHG 132
S ++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G
Sbjct: 1 SATMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSG 60
Query: 133 EKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+KIKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 61 QKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 98
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 5 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 40
>gi|308488029|ref|XP_003106209.1| CRE-RAB-14 protein [Caenorhabditis remanei]
gi|308254199|gb|EFO98151.1| CRE-RAB-14 protein [Caenorhabditis remanei]
gi|341884677|gb|EGT40612.1| CBN-RAB-14 protein [Caenorhabditis brenneri]
Length = 210
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDMTR 95
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|268581947|ref|XP_002645957.1| C. briggsae CBR-RAB-14 protein [Caenorhabditis briggsae]
Length = 210
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDMTR 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|387017952|gb|AFJ51094.1| ras-related protein Rab-14-like [Crotalus adamanteus]
Length = 215
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|213512047|ref|NP_001133753.1| ras-related protein Rab-14 [Salmo salar]
gi|209155216|gb|ACI33840.1| Ras-related protein Rab-14 [Salmo salar]
Length = 215
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|348532847|ref|XP_003453917.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|410904150|ref|XP_003965555.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|18390323|ref|NP_080973.1| ras-related protein Rab-14 [Mus musculus]
gi|19923483|ref|NP_057406.2| ras-related protein Rab-14 [Homo sapiens]
gi|55926076|ref|NP_001007505.1| rab14, member ras oncogene family [Xenopus (Silurana) tropicalis]
gi|61098298|ref|NP_001012814.1| ras-related protein Rab-14 [Gallus gallus]
gi|147900213|ref|NP_001087980.1| RAB14, member RAS oncogene family [Xenopus laevis]
gi|195539521|ref|NP_001124226.1| ras-related protein Rab-14 [Bos taurus]
gi|302563523|ref|NP_001181724.1| ras-related protein Rab-14 [Macaca mulatta]
gi|327532767|ref|NP_001126022.1| ras-related protein Rab-14 [Pongo abelii]
gi|73971644|ref|XP_532048.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Canis lupus
familiaris]
gi|109110403|ref|XP_001093688.1| PREDICTED: ras-related protein Rab-14-like isoform 1 [Macaca
mulatta]
gi|149641912|ref|XP_001512641.1| PREDICTED: ras-related protein Rab-14-like [Ornithorhynchus
anatinus]
gi|149738078|ref|XP_001504767.1| PREDICTED: ras-related protein Rab-14-like [Equus caballus]
gi|291408446|ref|XP_002720547.1| PREDICTED: GTPase Rab14 [Oryctolagus cuniculus]
gi|296190707|ref|XP_002743309.1| PREDICTED: ras-related protein Rab-14 [Callithrix jacchus]
gi|297270257|ref|XP_002800040.1| PREDICTED: ras-related protein Rab-14-like isoform 3 [Macaca
mulatta]
gi|301760428|ref|XP_002916000.1| PREDICTED: ras-related protein Rab-14-like [Ailuropoda melanoleuca]
gi|326930488|ref|XP_003211378.1| PREDICTED: ras-related protein Rab-14-like [Meleagris gallopavo]
gi|327290961|ref|XP_003230190.1| PREDICTED: ras-related protein Rab-14-like [Anolis carolinensis]
gi|332229896|ref|XP_003264122.1| PREDICTED: ras-related protein Rab-14 [Nomascus leucogenys]
gi|332832748|ref|XP_001149341.2| PREDICTED: ras-related protein Rab-14 [Pan troglodytes]
gi|334311476|ref|XP_001369724.2| PREDICTED: ras-related protein Rab-14-like [Monodelphis domestica]
gi|344271990|ref|XP_003407819.1| PREDICTED: ras-related protein Rab-14-like [Loxodonta africana]
gi|348586253|ref|XP_003478883.1| PREDICTED: ras-related protein Rab-14-like [Cavia porcellus]
gi|354491502|ref|XP_003507894.1| PREDICTED: ras-related protein Rab-14-like [Cricetulus griseus]
gi|395505605|ref|XP_003757130.1| PREDICTED: ras-related protein Rab-14 [Sarcophilus harrisii]
gi|397526487|ref|XP_003833155.1| PREDICTED: ras-related protein Rab-14 [Pan paniscus]
gi|402896514|ref|XP_003911342.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|402896516|ref|XP_003911343.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|403266081|ref|XP_003925225.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|403266083|ref|XP_003925226.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|410978973|ref|XP_003995861.1| PREDICTED: ras-related protein Rab-14 [Felis catus]
gi|426219615|ref|XP_004004014.1| PREDICTED: ras-related protein Rab-14 [Ovis aries]
gi|426362889|ref|XP_004048583.1| PREDICTED: ras-related protein Rab-14 isoform 1 [Gorilla gorilla
gorilla]
gi|426362891|ref|XP_004048584.1| PREDICTED: ras-related protein Rab-14 isoform 2 [Gorilla gorilla
gorilla]
gi|432885910|ref|XP_004074817.1| PREDICTED: ras-related protein Rab-14-like [Oryzias latipes]
gi|46577103|sp|Q91V41.3|RAB14_MOUSE RecName: Full=Ras-related protein Rab-14
gi|75054939|sp|Q5R8Z8.3|RAB14_PONAB RecName: Full=Ras-related protein Rab-14
gi|75571353|sp|Q5ZKU5.3|RAB14_CHICK RecName: Full=Ras-related protein Rab-14
gi|85700392|sp|P61106.4|RAB14_HUMAN RecName: Full=Ras-related protein Rab-14
gi|11274539|pir||T47160 hypothetical protein DKFZp762K0911.1 - human
gi|6563200|gb|AAF17194.1|AF112206_1 ras-related protein rab-14 [Homo sapiens]
gi|7328166|emb|CAB82414.1| hypothetical protein [Homo sapiens]
gi|10435483|dbj|BAB14598.1| unnamed protein product [Homo sapiens]
gi|12832884|dbj|BAB22298.1| unnamed protein product [Mus musculus]
gi|13543869|gb|AAH06081.1| RAB14, member RAS oncogene family [Homo sapiens]
gi|14290609|gb|AAH09085.1| RAB14, member RAS oncogene family [Mus musculus]
gi|19263820|gb|AAH25139.1| RAB14, member RAS oncogene family [Mus musculus]
gi|34785287|gb|AAH56648.1| RAB14, member RAS oncogene family [Mus musculus]
gi|45444739|gb|AAS64573.1| F protein-binding protein 1 [Homo sapiens]
gi|48146905|emb|CAG33675.1| RAB14 [Homo sapiens]
gi|51261919|gb|AAH79941.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|52138917|gb|AAH82642.1| LOC494665 protein [Xenopus laevis]
gi|53130638|emb|CAG31648.1| hypothetical protein RCJMB04_9b24 [Gallus gallus]
gi|55730075|emb|CAH91762.1| hypothetical protein [Pongo abelii]
gi|63087687|emb|CAI92125.1| RAB14 protein [Mus musculus]
gi|74144398|dbj|BAE36051.1| unnamed protein product [Mus musculus]
gi|74151588|dbj|BAE41143.1| unnamed protein product [Mus musculus]
gi|74214376|dbj|BAE40426.1| unnamed protein product [Mus musculus]
gi|74223093|dbj|BAE40686.1| unnamed protein product [Mus musculus]
gi|74227269|dbj|BAE38391.1| unnamed protein product [Mus musculus]
gi|74228978|dbj|BAE21957.1| unnamed protein product [Mus musculus]
gi|89269928|emb|CAJ81706.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|112292987|dbj|BAF02871.1| Rab14 [Mus musculus]
gi|117645408|emb|CAL38170.1| hypothetical protein [synthetic construct]
gi|117645524|emb|CAL38228.1| hypothetical protein [synthetic construct]
gi|119607893|gb|EAW87487.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607894|gb|EAW87488.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148676698|gb|EDL08645.1| RAB14, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149038930|gb|EDL93150.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|158455025|gb|AAI03316.2| RAB14 protein [Bos taurus]
gi|165971228|gb|AAI58586.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|193786920|dbj|BAG52243.1| unnamed protein product [Homo sapiens]
gi|261860956|dbj|BAI47000.1| RAB14, member RAS oncogene family [synthetic construct]
gi|296484316|tpg|DAA26431.1| TPA: RAB14, member RAS oncogene family [Bos taurus]
gi|344243592|gb|EGV99695.1| Ras-related protein Rab-14 [Cricetulus griseus]
gi|351698913|gb|EHB01832.1| Ras-related protein Rab-14 [Heterocephalus glaber]
gi|355567473|gb|EHH23814.1| Ras-related protein Rab-14 [Macaca mulatta]
gi|355753061|gb|EHH57107.1| Ras-related protein Rab-14 [Macaca fascicularis]
gi|380784807|gb|AFE64279.1| ras-related protein Rab-14 [Macaca mulatta]
gi|383409425|gb|AFH27926.1| ras-related protein Rab-14 [Macaca mulatta]
gi|384940268|gb|AFI33739.1| ras-related protein Rab-14 [Macaca mulatta]
gi|410217966|gb|JAA06202.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410258386|gb|JAA17160.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410308836|gb|JAA33018.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410348640|gb|JAA40924.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|417397261|gb|JAA45664.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431900765|gb|ELK08206.1| Ras-related protein Rab-14 [Pteropus alecto]
Length = 215
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|241896951|ref|NP_001155935.1| Rab-protein 14 isoform b [Acyrthosiphon pisum]
gi|239793451|dbj|BAH72840.1| ACYPI000787 [Acyrthosiphon pisum]
Length = 233
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/101 (85%), Positives = 90/101 (89%), Gaps = 3/101 (2%)
Query: 70 ALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIE 129
A SKMSSS YSYIFKYII+GDMGVGKSCLLHQFTEQKF DCPHTIGVEFGTRIIE
Sbjct: 19 ASESKMSSS---QYSYIFKYIIVGDMGVGKSCLLHQFTEQKFTADCPHTIGVEFGTRIIE 75
Query: 130 VHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
V G+KIKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 76 VSGKKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 116
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 34/44 (77%), Gaps = 6/44 (13%)
Query: 3 TMSSSGQYS------YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
TMSS S YSYIFKYII+GDMGVGKSCLLHQFTEQK+
Sbjct: 14 TMSSKASESKMSSSQYSYIFKYIIVGDMGVGKSCLLHQFTEQKF 57
>gi|41393147|ref|NP_958903.1| ras-related protein Rab-14 [Danio rerio]
gi|292614309|ref|XP_002662217.1| PREDICTED: ras-related protein Rab-14-like [Danio rerio]
gi|28279556|gb|AAH45374.1| RAB14, member RAS oncogene family [Danio rerio]
gi|157423545|gb|AAI53494.1| RAB14, member RAS oncogene family [Danio rerio]
gi|182890232|gb|AAI65420.1| Rab14 protein [Danio rerio]
Length = 215
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K+K
Sbjct: 2 TTAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TTAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|355714845|gb|AES05136.1| RAB14, member RAS oncoprotein family [Mustela putorius furo]
Length = 148
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 3 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 62
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 63 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 96
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 3 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 37
>gi|47223593|emb|CAF99202.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|63087695|emb|CAI92129.1| RAB14 protein [Mus musculus]
Length = 215
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|148676697|gb|EDL08644.1| RAB14, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 218
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/97 (84%), Positives = 89/97 (91%)
Query: 73 SKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHG 132
S ++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G
Sbjct: 65 SATMATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSG 124
Query: 133 EKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+KIKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 125 QKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 161
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 69 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 103
>gi|395824398|ref|XP_003785452.1| PREDICTED: ras-related protein Rab-14 [Otolemur garnettii]
Length = 206
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|16758368|ref|NP_446041.1| ras-related protein Rab-14 [Rattus norvegicus]
gi|72535182|ref|NP_001026953.1| ras-related protein Rab-14 [Sus scrofa]
gi|46577632|sp|P61107.3|RAB14_RAT RecName: Full=Ras-related protein Rab-14
gi|75060237|sp|Q52NJ6.3|RAB14_PIG RecName: Full=Ras-related protein Rab-14
gi|6002803|gb|AAF00150.1|AF152463_1 RAB14 protein [Homo sapiens]
gi|20379074|gb|AAM21097.1|AF498949_1 small GTP binding protein RAB14 [Homo sapiens]
gi|206535|gb|AAA41994.1| RAB14 [Rattus norvegicus]
gi|6625806|gb|AAF19400.1| GTPase Rab14 [Homo sapiens]
gi|62868634|gb|AAY17505.1| Ras-related protein Rab-14 [Sus scrofa]
gi|159906373|gb|ABX10875.1| RAB14 [Capra hircus]
Length = 215
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 86/90 (95%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIW
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|443717670|gb|ELU08633.1| hypothetical protein CAPTEDRAFT_142121 [Capitella teleta]
Length = 95
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|41053455|ref|NP_956977.1| ras-related protein Rab-14 [Danio rerio]
gi|34849498|gb|AAH58341.1| RAB14, member RAS oncogene family, like [Danio rerio]
Length = 215
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|170037321|ref|XP_001846507.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
gi|167880416|gb|EDS43799.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
Length = 215
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|157135158|ref|XP_001656549.1| ras-related protein Rab, putative [Aedes aegypti]
gi|108870279|gb|EAT34504.1| AAEL013252-PC [Aedes aegypti]
Length = 215
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|158296675|ref|XP_555021.3| AGAP008419-PA [Anopheles gambiae str. PEST]
gi|157014825|gb|EAL39571.3| AGAP008419-PA [Anopheles gambiae str. PEST]
Length = 215
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/93 (87%), Positives = 87/93 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|350534852|ref|NP_001232642.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128799|gb|ACH45297.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 215
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQF E+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFAEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQF E+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFAEKKFM 37
>gi|157135160|ref|XP_001656550.1| ras-related protein Rab, putative [Aedes aegypti]
Length = 157
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|403183345|gb|EAT34505.2| AAEL013252-PB [Aedes aegypti]
Length = 239
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 26 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 85
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 86 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 26 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 60
>gi|157135156|ref|XP_001656548.1| ras-related protein Rab, putative [Aedes aegypti]
gi|108870278|gb|EAT34503.1| AAEL013252-PA [Aedes aegypti]
Length = 160
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|242007549|ref|XP_002424602.1| predicted protein [Pediculus humanus corporis]
gi|212508045|gb|EEB11864.1| predicted protein [Pediculus humanus corporis]
Length = 215
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 88/93 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SSG Y+YSYIFKYI+IGDMGVGKSCLLHQFTE+KFM DC HT+GVEFGTR+IEV G+KIK
Sbjct: 2 SSGPYNYSYIFKYILIGDMGVGKSCLLHQFTEKKFMSDCHHTLGVEFGTRVIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SSG Y+YSYIFKYI+IGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SSGPYNYSYIFKYILIGDMGVGKSCLLHQFTEKKF 36
>gi|378792667|pdb|4DRZ|A Chain A, Crystal Structure Of Human Rab14
Length = 196
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 21 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 80
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQ RFRAVTRSYYRGAAGALMV D++
Sbjct: 81 LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITR 114
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 21 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 55
>gi|449678450|ref|XP_002162946.2| PREDICTED: ras-related protein Rab-14-like [Hydra magnipapillata]
Length = 216
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 87/93 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+ G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EV +KIK
Sbjct: 2 AGGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVASQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 94
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 AGGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|225709986|gb|ACO10839.1| Ras-related protein Rab-14 [Caligus rogercresseyi]
Length = 217
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 88/93 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS Y+YS+IFKYIIIGDMGVGKSCLLHQFTE+KF+ DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SSAPYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKFLSDCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGA++V DV+
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGAILVYDVT 94
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
SS Y+YS+IFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SSAPYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKFL 37
>gi|225713938|gb|ACO12815.1| Ras-related protein Rab-14 [Lepeophtheirus salmonis]
Length = 219
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/93 (86%), Positives = 88/93 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS Y+YS+IFKYIIIGDMGVGKSCLLHQFTE+KF+ DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SSAPYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKFLSDCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGA++V DV+
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGAILVYDVT 94
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
SS Y+YS+IFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SSAPYNYSFIFKYIIIGDMGVGKSCLLHQFTEKKFL 37
>gi|63087691|emb|CAI92127.1| RAB14 protein [Mus musculus]
Length = 215
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQ RFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|289740227|gb|ADD18861.1| Rab protein 14 [Glossina morsitans morsitans]
Length = 215
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS Y+Y+YIFKYIIIGDMGVGKSC+LHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 SSAPYNYNYIFKYIIIGDMGVGKSCILHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
SS Y+Y+YIFKYIIIGDMGVGKSC+LHQFTE+K+
Sbjct: 2 SSAPYNYNYIFKYIIIGDMGVGKSCILHQFTEKKFM 37
>gi|195436943|ref|XP_002066405.1| GK18273 [Drosophila willistoni]
gi|194162490|gb|EDW77391.1| GK18273 [Drosophila willistoni]
Length = 243
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 89
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 90 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 123
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 65
>gi|241896945|ref|NP_001155932.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
gi|241896947|ref|NP_001155933.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
gi|241896949|ref|NP_001155934.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
Length = 210
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 87/96 (90%), Gaps = 3/96 (3%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSSS YSYIFKYII+GDMGVGKSCLLHQFTEQKF DCPHTIGVEFGTRIIEV G+K
Sbjct: 1 MSSS---QYSYIFKYIIVGDMGVGKSCLLHQFTEQKFTADCPHTIGVEFGTRIIEVSGKK 57
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 58 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 93
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%), Gaps = 3/37 (8%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSSS YSYIFKYII+GDMGVGKSCLLHQFTEQK+
Sbjct: 1 MSSS---QYSYIFKYIIVGDMGVGKSCLLHQFTEQKF 34
>gi|194758573|ref|XP_001961536.1| GF14883 [Drosophila ananassae]
gi|190615233|gb|EDV30757.1| GF14883 [Drosophila ananassae]
Length = 239
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 85
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 86 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 61
>gi|28574177|ref|NP_788056.1| Rab14, isoform B [Drosophila melanogaster]
gi|195338419|ref|XP_002035822.1| GM15560 [Drosophila sechellia]
gi|28380366|gb|AAO41193.1| Rab14, isoform B [Drosophila melanogaster]
gi|194129702|gb|EDW51745.1| GM15560 [Drosophila sechellia]
Length = 239
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 85
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 86 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKF 60
>gi|195164876|ref|XP_002023272.1| GL21269 [Drosophila persimilis]
gi|198473182|ref|XP_001356197.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
gi|194105357|gb|EDW27400.1| GL21269 [Drosophila persimilis]
gi|198139340|gb|EAL33257.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
Length = 239
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 85
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 86 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 61
>gi|17137218|ref|NP_477171.1| Rab14, isoform A [Drosophila melanogaster]
gi|2313041|dbj|BAA21709.1| rab14 [Drosophila melanogaster]
gi|7298153|gb|AAF53390.1| Rab14, isoform A [Drosophila melanogaster]
gi|297591874|gb|ADI46814.1| MIP20481p [Drosophila melanogaster]
Length = 215
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|195397826|ref|XP_002057529.1| GJ18183 [Drosophila virilis]
gi|194141183|gb|EDW57602.1| GJ18183 [Drosophila virilis]
Length = 236
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 23 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 82
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 83 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 116
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 23 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 58
>gi|195474015|ref|XP_002089287.1| GE19031 [Drosophila yakuba]
gi|194175388|gb|EDW88999.1| GE19031 [Drosophila yakuba]
Length = 239
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 85
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 86 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 26 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKF 60
>gi|195033809|ref|XP_001988767.1| GH11344 [Drosophila grimshawi]
gi|193904767|gb|EDW03634.1| GH11344 [Drosophila grimshawi]
Length = 243
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/93 (83%), Positives = 87/93 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 89
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 90 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 122
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKF 64
>gi|195115754|ref|XP_002002421.1| GI12880 [Drosophila mojavensis]
gi|193912996|gb|EDW11863.1| GI12880 [Drosophila mojavensis]
Length = 243
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/93 (83%), Positives = 87/93 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 89
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 90 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 122
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 30 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 65
>gi|28574179|ref|NP_788057.1| Rab14, isoform C [Drosophila melanogaster]
gi|28380367|gb|AAO41194.1| Rab14, isoform C [Drosophila melanogaster]
gi|157816819|gb|ABV82401.1| RH10422p [Drosophila melanogaster]
Length = 233
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 87/94 (92%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 20 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 79
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 80 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 113
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 20 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKF 54
>gi|17862462|gb|AAL39708.1| LD29476p [Drosophila melanogaster]
Length = 215
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 87/93 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+KFM +CPHTIGVEFGTRIIEV +KIK
Sbjct: 2 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSY+RGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYHRGAAGALMVYDIT 94
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+Y+YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|256071246|ref|XP_002571952.1| rab-2414 [Schistosoma mansoni]
gi|238657101|emb|CAZ28182.1| rab-2,4,14, putative [Schistosoma mansoni]
Length = 225
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 89/96 (92%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS G Y+YSYIFKYII+GDMGVGKSCL+HQFTE+KF+PDCPHTIGVEF T+IIEV+ +K
Sbjct: 1 MSIGGGYNYSYIFKYIIVGDMGVGKSCLMHQFTEKKFIPDCPHTIGVEFSTKIIEVNDQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K+QIWDTAGQERFRAVTRSYYRGA+GAL+V D++
Sbjct: 61 VKIQIWDTAGQERFRAVTRSYYRGASGALLVYDITR 96
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MS G Y+YSYIFKYII+GDMGVGKSCL+HQFTE+K+
Sbjct: 1 MSIGGGYNYSYIFKYIIVGDMGVGKSCLMHQFTEKKF 37
>gi|29841087|gb|AAP06100.1| SJCHGC09497 protein [Schistosoma japonicum]
Length = 224
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 88/96 (91%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS G Y+YSYIFKYII+GDMGVGKSCL+HQFTE+KF+PDCPHTIGVEF T+I+EV+ +K
Sbjct: 1 MSIGGGYNYSYIFKYIIVGDMGVGKSCLMHQFTEKKFIPDCPHTIGVEFATKIVEVNDQK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K+QIWDTAGQERFRAVTRSYYRGAAG L+V D++
Sbjct: 61 VKIQIWDTAGQERFRAVTRSYYRGAAGVLLVYDITR 96
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MS G Y+YSYIFKYII+GDMGVGKSCL+HQFTE+K+
Sbjct: 1 MSIGGGYNYSYIFKYIIVGDMGVGKSCLMHQFTEKKF 37
>gi|313219845|emb|CBY30761.1| unnamed protein product [Oikopleura dioica]
Length = 2811
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 76/93 (81%), Positives = 86/93 (92%), Gaps = 1/93 (1%)
Query: 78 SGQ-YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SGQ Y+Y YI KYIIIGD GVGKSCLLHQFTE+KFM DCPHTIGVE+GTRIIEV G++IK
Sbjct: 2 SGQPYNYDYILKYIIIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRG++GA+MV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGSSGAIMVYDIT 94
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/35 (80%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
Query: 7 SGQ-YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SGQ Y+Y YI KYIIIGD GVGKSCLLHQFTE+K+
Sbjct: 2 SGQPYNYDYILKYIIIGDQGVGKSCLLHQFTEKKF 36
>gi|326434122|gb|EGD79692.1| small GTP binding protein RAB14 [Salpingoeca sp. ATCC 50818]
Length = 211
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 86/94 (91%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+S ++YSYIFKYIIIGDMGVGKSCLLHQF E+KF+ DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ASKNFNYSYIFKYIIIGDMGVGKSCLLHQFIEKKFLTDCPHTIGVEFGTRIIEVCGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAG L+V DV+
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGVLLVYDVAR 95
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
+S ++YSYIFKYIIIGDMGVGKSCLLHQF E+K+
Sbjct: 2 ASKNFNYSYIFKYIIIGDMGVGKSCLLHQFIEKKFL 37
>gi|195579198|ref|XP_002079449.1| GD23961 [Drosophila simulans]
gi|194191458|gb|EDX05034.1| GD23961 [Drosophila simulans]
Length = 239
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 84/90 (93%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y+Y+YIFKYIIIGDMGVGKSCL HQFTE+KFM +CPHTIGVEFGTRIIEV +KIKLQIW
Sbjct: 30 YNYNYIFKYIIIGDMGVGKSCLRHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIW 89
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 90 DTAGQERFRAVTRSYYRGAAGALMVYDITR 119
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+YIFKYIIIGDMGVGKSCL HQFTE+K+
Sbjct: 30 YNYNYIFKYIIIGDMGVGKSCLRHQFTEKKF 60
>gi|440799928|gb|ELR20971.1| Rab4, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 84/92 (91%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y YIFKYIIIGDMGVGKSCLLHQFTE+KF+PD PHTIGVEFGTRIIEV G+KIKLQ
Sbjct: 2 ASFPYEYIFKYIIIGDMGVGKSCLLHQFTEKKFIPDSPHTIGVEFGTRIIEVMGKKIKLQ 61
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 62 IWDTAGQERFRAVTRSYYRGAAGALLVYDITR 93
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ASFPYEYIFKYIIIGDMGVGKSCLLHQFTEKKF 34
>gi|290977760|ref|XP_002671605.1| rab family small GTPase [Naegleria gruberi]
gi|284085175|gb|EFC38861.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/88 (87%), Positives = 82/88 (93%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDMGVGKSCLLHQFTEQKF DCPHTIGVEFGTR+IEV G+ IKLQIWD
Sbjct: 3 SHEYIFKYIIIGDMGVGKSCLLHQFTEQKFQSDCPHTIGVEFGTRVIEVEGKSIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 63 TAGQERFRAVTRSYYRGAAGALMVYDIT 90
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 29/30 (96%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDMGVGKSCLLHQFTEQK+
Sbjct: 3 SHEYIFKYIIIGDMGVGKSCLLHQFTEQKF 32
>gi|414969|gb|AAA80151.1| Rab4 [Dictyostelium discoideum]
Length = 205
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>gi|281209756|gb|EFA83924.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 207
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDNPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>gi|66813122|ref|XP_640740.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|110282987|sp|P36410.2|RAB14_DICDI RecName: Full=Ras-related protein Rab-14; AltName: Full=Rab4-like
GTPase
gi|60468753|gb|EAL66754.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>gi|330802011|ref|XP_003289015.1| hypothetical protein DICPUDRAFT_92215 [Dictyostelium purpureum]
gi|325080945|gb|EGC34480.1| hypothetical protein DICPUDRAFT_92215 [Dictyostelium purpureum]
Length = 212
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>gi|328872116|gb|EGG20483.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 206
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDNPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>gi|313216504|emb|CBY37802.1| unnamed protein product [Oikopleura dioica]
gi|313232450|emb|CBY24118.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/93 (81%), Positives = 86/93 (92%), Gaps = 1/93 (1%)
Query: 78 SGQ-YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SGQ Y+Y YI KYIIIGD GVGKSCLLHQFTE+KFM DCPHTIGVE+GTRIIEV G++IK
Sbjct: 2 SGQPYNYDYILKYIIIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFRAVTRSYYRG++GA+MV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGSSGAIMVYDIT 94
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 7 SGQ-YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
SGQ Y+Y YI KYIIIGD GVGKSCLLHQFTE+K+
Sbjct: 2 SGQPYNYDYILKYIIIGDQGVGKSCLLHQFTEKKFM 37
>gi|432951355|ref|XP_004084790.1| PREDICTED: ras-related protein Rab-14-like, partial [Oryzias
latipes]
Length = 200
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 76/79 (96%)
Query: 91 IIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRA 150
+ GDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRI+EVHG+K+KLQIWDTAGQERFRA
Sbjct: 1 LAGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWDTAGQERFRA 60
Query: 151 VTRSYYRGAAGALMVIDVS 169
VTRSYYRGAAGALMV D++
Sbjct: 61 VTRSYYRGAAGALMVYDIT 79
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 20 IIGDMGVGKSCLLHQFTEQKYF 41
+ GDMGVGKSCLLHQFTE+K+
Sbjct: 1 LAGDMGVGKSCLLHQFTEKKFM 22
>gi|428175915|gb|EKX44802.1| hypothetical protein GUITHDRAFT_94864 [Guillardia theta CCMP2712]
Length = 210
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ YIFKYIIIGDMGVGKSCLL QFTE++F D PHTIG+EFGTR+ EV+G+ IKLQIWDT
Sbjct: 4 FEYIFKYIIIGDMGVGKSCLLQQFTEKRFPEDQPHTIGIEFGTRVCEVNGKVIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQERFRAVTRSYYRGAAGA+MV D++
Sbjct: 64 AGQERFRAVTRSYYRGAAGAIMVYDIT 90
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ YIFKYIIIGDMGVGKSCLL QFTE+++
Sbjct: 4 FEYIFKYIIIGDMGVGKSCLLQQFTEKRF 32
>gi|442758569|gb|JAA71443.1| Putative gtpase rab14 small g protein superfamily [Ixodes ricinus]
Length = 307
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/78 (89%), Positives = 74/78 (94%)
Query: 93 GDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVT 152
GDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIWDTAGQERFRAVT
Sbjct: 18 GDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIKLQIWDTAGQERFRAVT 77
Query: 153 RSYYRGAAGALMVIDVSH 170
RSYYRGAAGALMV D++
Sbjct: 78 RSYYRGAAGALMVYDITR 95
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 22 GDMGVGKSCLLHQFTEQKY 40
GDMGVGKSCLLHQFTE+K+
Sbjct: 18 GDMGVGKSCLLHQFTEKKF 36
>gi|307173866|gb|EFN64623.1| Ras-related protein Rab-14 [Camponotus floridanus]
gi|307200826|gb|EFN80879.1| Ras-related protein Rab-14 [Harpegnathos saltator]
Length = 199
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/75 (90%), Positives = 72/75 (96%)
Query: 95 MGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRS 154
MGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIWDTAGQERFRAVTRS
Sbjct: 1 MGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRS 60
Query: 155 YYRGAAGALMVIDVS 169
YYRGAAGALMV D++
Sbjct: 61 YYRGAAGALMVYDIT 75
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 24 MGVGKSCLLHQFTEQKYF 41
MGVGKSCLLHQFTE+K+
Sbjct: 1 MGVGKSCLLHQFTEKKFM 18
>gi|407866814|gb|EKG08400.1| hypothetical protein TCSYLVIO_000448 [Trypanosoma cruzi]
Length = 211
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ+F D PHTIGVEFGT ++++GE +KLQIWD
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V DVS
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDVS 89
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ++ L T
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHT 38
>gi|407404146|gb|EKF29737.1| hypothetical protein MOQ_006467 [Trypanosoma cruzi marinkellei]
Length = 211
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ+F D PHTIGVEFGT ++++GE +KLQIWD
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V DVS
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDVS 89
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ++
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRF 31
>gi|71661548|ref|XP_817794.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883006|gb|EAN95943.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ+F D PHTIGVEFGT ++++GE +KLQIWD
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V DVS
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDVS 89
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ++ L T
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHT 38
>gi|71661053|ref|XP_817553.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882752|gb|EAN95702.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ+F D PHTIGVEFGT ++++GE +KLQIWD
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V DVS
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDVS 89
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
S+ YIFKYIIIGDMGVGKSCL+ +FTEQ++ L T
Sbjct: 2 SHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHT 38
>gi|157423419|gb|AAI53495.1| Rab14 protein [Danio rerio]
Length = 157
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 72/76 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+K+K
Sbjct: 2 TTAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVK 61
Query: 137 LQIWDTAGQERFRAVT 152
LQIWDTAGQERFRAVT
Sbjct: 62 LQIWDTAGQERFRAVT 77
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TTAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|401407536|ref|XP_003883217.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117633|emb|CBZ53185.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 214
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 79/95 (83%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
SS + Y Y+FK+IIIGD G GKSCLLHQF E KF C HTIGVEFG+++I + G++I
Sbjct: 4 SSKDKDHYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGCSHTIGVEFGSKMINIAGKRI 63
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAGQER+R+VTRSYYRGAAGAL+V D+S+
Sbjct: 64 KLQIWDTAGQERYRSVTRSYYRGAAGALLVYDISN 98
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SS + Y Y+FK+IIIGD G GKSCLLHQF E K+ G T
Sbjct: 4 SSKDKDHYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGCSHT 46
>gi|146077413|ref|XP_001463263.1| putative ras-related protein rab-14 [Leishmania infantum JPCM5]
gi|398010606|ref|XP_003858500.1| ras-related protein rab-14, putative [Leishmania donovani]
gi|134067347|emb|CAM65619.1| putative ras-related protein rab-14 [Leishmania infantum JPCM5]
gi|322496708|emb|CBZ31777.1| ras-related protein rab-14, putative [Leishmania donovani]
Length = 225
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDM VGKSCL+H FTEQ++ D PHTIGV+FGT +++++GE +KLQ+WD
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V D+S
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDIS 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDM VGKSCL+H FTEQ+Y
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRY 31
>gi|237831345|ref|XP_002364970.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962634|gb|EEA97829.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487179|gb|EEE25425.1| RAB-2,4,14, putative [Toxoplasma gondii GT1]
gi|221506865|gb|EEE32482.1| GTP-binding protein rab2, putative [Toxoplasma gondii VEG]
Length = 214
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 78/95 (82%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
SS Y Y+FK+IIIGD G GKSCLLHQF E KF C HTIGVEFG+++I + G++I
Sbjct: 4 SSKDLDHYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGCSHTIGVEFGSKLINIAGKRI 63
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAGQER+R+VTRSYYRGAAGAL+V D+S+
Sbjct: 64 KLQIWDTAGQERYRSVTRSYYRGAAGALLVYDISN 98
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLG 43
SS Y Y+FK+IIIGD G GKSCLLHQF E K+ G
Sbjct: 4 SSKDLDHYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKG 42
>gi|157864504|ref|XP_001680962.1| putative ras-related protein rab-14 [Leishmania major strain
Friedlin]
gi|68124255|emb|CAJ07017.1| putative ras-related protein rab-14 [Leishmania major strain
Friedlin]
Length = 225
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDM VGKSCL+H FTEQ++ D PHTIGV+FGT +++++GE +KLQ+WD
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V D+S
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDIS 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDM VGKSCL+H FTEQ+Y
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRY 31
>gi|401415413|ref|XP_003872202.1| putative ras-related protein rab-14 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488425|emb|CBZ23671.1| putative ras-related protein rab-14 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 225
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 78/88 (88%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDM VGKSCL+H FTEQ++ D PHTIGV+FGT +++++GE +KLQ+WD
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V D+S
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDIS 89
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDM VGKSCL+H FTEQ+Y
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRY 31
>gi|294944575|ref|XP_002784324.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
gi|239897358|gb|EER16120.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
Length = 192
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F PD TIGVEFG R++ V G++IKLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLTIGVEFGARLVNVDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGA GAL+V D+S
Sbjct: 62 TAGQESFRSITRSYYRGATGALLVYDISR 90
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SYSY+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLT 38
>gi|89258415|gb|ABD65431.1| Rab4 [Suberites domuncula]
Length = 210
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG+ GVGKSCLLHQF EQKF D HTIGVEFG++++ + + +KLQ+WD
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEQKFKQDSNHTIGVEFGSKVVNISSKSVKLQVWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIS 91
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK+++IG+ GVGKSCLLHQF EQK+
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEQKF 33
>gi|270007332|gb|EFA03780.1| hypothetical protein TcasGA2_TC013891 [Tribolium castaneum]
Length = 183
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRS 154
LQIWDTAGQE + TR+
Sbjct: 62 LQIWDTAGQESWLTDTRN 79
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
S+G Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 SAGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>gi|156086828|ref|XP_001610821.1| Rab2 [Babesia bovis T2Bo]
gi|32492052|gb|AAP85298.1| Rab2 [Babesia bovis]
gi|154798074|gb|EDO07253.1| Rab2 [Babesia bovis]
Length = 217
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR+I V G+ IKLQIWD
Sbjct: 3 SYKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRLINVKGDTIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY Y+FKYIIIGD GVGKSCLL +FT++++ LT
Sbjct: 3 SYKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLT 39
>gi|294866679|ref|XP_002764808.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
gi|239864555|gb|EEQ97525.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
Length = 212
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F PD TIGVEFG R++ V G++IKLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLTIGVEFGARLVNVDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGA GAL+V D+S
Sbjct: 62 TAGQESFRSITRSYYRGATGALLVYDISR 90
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SYSY+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLT 38
>gi|154332368|ref|XP_001562558.1| putative ras-related protein rab-14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059448|emb|CAM41674.1| putative ras-related protein rab-14 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 225
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 77/88 (87%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S+ YIFKYIIIGDM VGKSCL+H FTEQ++ D HTIGV+FGT +I+++GE +KLQ+WD
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLLHTIGVDFGTTVIDINGELVKLQMWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTR YYRGAAGAL+V D+S
Sbjct: 62 TAGQERFRSVTRGYYRGAAGALLVYDIS 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ YIFKYIIIGDM VGKSCL+H FTEQ+Y
Sbjct: 2 SHKYIFKYIIIGDMSVGKSCLMHLFTEQRY 31
>gi|84998352|ref|XP_953897.1| Rab GTPAse [Theileria annulata]
gi|65304895|emb|CAI73220.1| Rab GTPAse, putative [Theileria annulata]
Length = 210
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR I V GE+IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKYIIIGD GVGKSCLL +FT++++
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRF 32
>gi|209876790|ref|XP_002139837.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555443|gb|EEA05488.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 216
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 77/96 (80%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS + Y Y+FK+IIIGD G GKSCLLHQF E KF HTIGVEFG++II G++
Sbjct: 1 MSRQEKEQYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGSSHTIGVEFGSKIITTGGKR 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+KLQIWDTAGQER+R+VTRSYYRGAAGAL+V D+++
Sbjct: 61 VKLQIWDTAGQERYRSVTRSYYRGAAGALIVYDITN 96
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLG 43
MS + Y Y+FK+IIIGD G GKSCLLHQF E K+ G
Sbjct: 1 MSRQEKEQYDYLFKFIIIGDAGAGKSCLLHQFIENKFKKG 40
>gi|428673102|gb|EKX74015.1| Ras-related protein rab2 small GTP-binding protein [Babesia equi]
Length = 215
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR I V GE+IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVDGEQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKYIIIGD GVGKSCLL +FT++++
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRF 32
>gi|126654505|ref|XP_001388423.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117363|gb|EAZ51463.1| hypothetical protein cgd8_1040 [Cryptosporidium parvum Iowa II]
Length = 216
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 77/96 (80%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS + Y Y+FK+I+IGD G GKSCLLHQF E KF HTIGVEFG++II G++
Sbjct: 1 MSRQEKEQYDYLFKFIVIGDAGAGKSCLLHQFIENKFKKGSSHTIGVEFGSKIITAGGKR 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQER+R+VTRSYYRGAAGAL+V D+++
Sbjct: 61 IKLQIWDTAGQERYRSVTRSYYRGAAGALIVYDITN 96
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLG 43
MS + Y Y+FK+I+IGD G GKSCLLHQF E K+ G
Sbjct: 1 MSRQEKEQYDYLFKFIVIGDAGAGKSCLLHQFIENKFKKG 40
>gi|71033513|ref|XP_766398.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353355|gb|EAN34115.1| GTP-binding protein rab2, putative [Theileria parva]
Length = 215
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR I V GE+IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKYIIIGD GVGKSCLL +FT++++
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRF 32
>gi|449665721|ref|XP_002158483.2| PREDICTED: ras-related protein Rab-4B-like [Hydra magnipapillata]
Length = 209
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FKY+IIG GVGKSC+LHQF E KF D HTIGVEFG++I+ + G+ +KLQIWD
Sbjct: 4 TYDYLFKYLIIGSAGVGKSCILHQFMENKFKQDAHHTIGVEFGSKIVNIGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FKY+IIG GVGKSC+LHQF E K+
Sbjct: 4 TYDYLFKYLIIGSAGVGKSCILHQFMENKF 33
>gi|73535722|pdb|1YU9|A Chain A, Gppnhp-Bound Rab4a
Length = 175
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 77/91 (84%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G +Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQ
Sbjct: 4 GSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 63
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 IWDTAGQERFRSVTRSYYRGAAGALLVYDIT 94
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
G +Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 GSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 36
>gi|324522578|gb|ADY48083.1| Ras-related protein Rab-4B, partial [Ascaris suum]
Length = 214
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 79/93 (84%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+ SY+Y+ K++IIG+ G GKSC++HQF E+KF + HTIGVEFG+R++ + G+K+KL
Sbjct: 2 AADTSYNYLLKFLIIGNAGTGKSCIMHQFIERKFKANSAHTIGVEFGSRMVALGGKKVKL 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVTRSYYRGAAGAL+V D+++
Sbjct: 62 QIWDTAGQERFRAVTRSYYRGAAGALLVYDITN 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ SY+Y+ K++IIG+ G GKSC++HQF E+K+
Sbjct: 2 AADTSYNYLLKFLIIGNAGTGKSCIMHQFIERKF 35
>gi|89628413|gb|ABD77504.1| Rab GTPAse, partial [Theileria lestoquardi]
Length = 98
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR I V GE+IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKYIIIGD GVGKSCLL +FT++++
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRF 32
>gi|332252118|ref|XP_003275201.1| PREDICTED: ras-related protein Rab-4A isoform 2 [Nomascus
leucogenys]
Length = 218
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|402858726|ref|XP_003893843.1| PREDICTED: ras-related protein Rab-4A [Papio anubis]
Length = 218
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|119590301|gb|EAW69895.1| RAB4A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 150
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|403221236|dbj|BAM39369.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL +FT+++F PD TIGVEFGTR I V GE+IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISR 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL +FT++++ LT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLT 39
>gi|340371749|ref|XP_003384407.1| PREDICTED: ras-related protein Rab-4B-like [Amphimedon
queenslandica]
Length = 213
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG+ GVGKSCLLHQF E KF D HTIGVEFG++++ + + +KLQ+WD
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEHKFKQDSNHTIGVEFGSKVVSLANKSVKLQVWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIS 91
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK+++IG+ GVGKSCLLHQF E K+
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEHKF 33
>gi|417397071|gb|JAA45569.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 205
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 77/91 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR+VTRSYYRGAAGAL+V D++ +
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITXAR 99
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|355714956|gb|AES05175.1| RAB4A, member RAS oncoprotein family [Mustela putorius furo]
Length = 224
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 72 VSKMSSSG-QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV 130
KMS + +Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V
Sbjct: 5 APKMSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINV 64
Query: 131 HGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
G+ +KLQIWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 65 GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 103
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 16 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 45
>gi|432890268|ref|XP_004075447.1| PREDICTED: ras-related protein Rab-4B-like [Oryzias latipes]
Length = 213
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R+I V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVINVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|50741401|ref|XP_419573.1| PREDICTED: ras-related protein Rab-4A [Gallus gallus]
Length = 218
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|66361567|pdb|2BMD|A Chain A, High Resolution Structure Of Gdp-Bound Human Rab4a
gi|66361568|pdb|2BME|A Chain A, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361569|pdb|2BME|B Chain B, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361570|pdb|2BME|C Chain C, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361571|pdb|2BME|D Chain D, High Resolution Structure Of Gppnhp-Bound Human Rab4a
Length = 186
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 6 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 66 TAGQERFRSVTRSYYRGAAGALLVYDIT 93
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 6 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 35
>gi|296477861|tpg|DAA19976.1| TPA: RAB4B, member RAS oncogene family [Bos taurus]
Length = 156
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|62859319|ref|NP_001016987.1| RAB4B member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271275|emb|CAJ83371.1| RAB4B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|195539619|gb|AAI68000.1| hypothetical protein LOC549741 [Xenopus (Silurana) tropicalis]
Length = 213
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIA 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|118783599|ref|XP_313105.2| AGAP004204-PA [Anopheles gambiae str. PEST]
gi|116128945|gb|EAA08616.2| AGAP004204-PA [Anopheles gambiae str. PEST]
Length = 224
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/88 (71%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ IKLQIWD
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKF 33
>gi|171184402|ref|NP_033029.2| ras-related protein Rab-4A [Mus musculus]
gi|74183520|dbj|BAE36619.1| unnamed protein product [Mus musculus]
gi|74202133|dbj|BAE23048.1| unnamed protein product [Mus musculus]
gi|112292951|dbj|BAF02853.1| Rab4A [Mus musculus]
gi|148679808|gb|EDL11755.1| RAB4A, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|395836166|ref|XP_003791035.1| PREDICTED: ras-related protein Rab-4A [Otolemur garnettii]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|395751217|ref|XP_002829293.2| PREDICTED: ras-related protein Rab-4B-like, partial [Pongo abelii]
Length = 101
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|19923260|ref|NP_004569.2| ras-related protein Rab-4A isoform 1 [Homo sapiens]
gi|383873316|ref|NP_001244480.1| ras-related protein Rab-4A [Macaca mulatta]
gi|296230239|ref|XP_002760619.1| PREDICTED: ras-related protein Rab-4A [Callithrix jacchus]
gi|297661712|ref|XP_002809375.1| PREDICTED: ras-related protein Rab-4A [Pongo abelii]
gi|332252116|ref|XP_003275200.1| PREDICTED: ras-related protein Rab-4A isoform 1 [Nomascus
leucogenys]
gi|397508091|ref|XP_003824504.1| PREDICTED: ras-related protein Rab-4A [Pan paniscus]
gi|402858724|ref|XP_003893842.1| PREDICTED: ras-related protein Rab-4A [Papio anubis]
gi|403300136|ref|XP_003940812.1| PREDICTED: ras-related protein Rab-4A [Saimiri boliviensis
boliviensis]
gi|20379044|gb|AAM21082.1|AF498934_1 small GTP binding protein RAB4A [Homo sapiens]
gi|12803249|gb|AAH02438.1| RAB4A, member RAS oncogene family [Homo sapiens]
gi|13279194|gb|AAH04309.1| RAB4A, member RAS oncogene family [Homo sapiens]
gi|50981015|gb|AAT91347.1| HRES-1 antisense Rab [Homo sapiens]
gi|117644706|emb|CAL37818.1| hypothetical protein [synthetic construct]
gi|117645990|emb|CAL38462.1| hypothetical protein [synthetic construct]
gi|119590296|gb|EAW69890.1| RAB4A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119590300|gb|EAW69894.1| RAB4A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984433|gb|ABM83562.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|123998397|gb|ABM86800.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|189054036|dbj|BAG36543.1| unnamed protein product [Homo sapiens]
gi|208965410|dbj|BAG72719.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|380815226|gb|AFE79487.1| ras-related protein Rab-4A [Macaca mulatta]
gi|383420427|gb|AFH33427.1| ras-related protein Rab-4A [Macaca mulatta]
gi|384948556|gb|AFI37883.1| ras-related protein Rab-4A [Macaca mulatta]
gi|410227434|gb|JAA10936.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410261354|gb|JAA18643.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410292912|gb|JAA25056.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410338349|gb|JAA38121.1| RAB4A, member RAS oncogene family [Pan troglodytes]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|344247266|gb|EGW03370.1| Ras-related protein Rab-4A [Cricetulus griseus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|225717876|gb|ACO14784.1| Ras-related protein Rab-4B [Caligus clemensi]
Length = 220
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG G GKSCLLHQF E +++ +C HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 5 SYDYLFKFLVIGSAGTGKSCLLHQFIEGRYLDECRHTIGVEFGSRVLPVGGKTVKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 65 TAGQERFRSVTRSYYRGAAGALLVYDIA 92
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
SY Y+FK+++IG G GKSCLLHQF E +Y
Sbjct: 5 SYDYLFKFLVIGSAGTGKSCLLHQFIEGRYL 35
>gi|194206066|ref|XP_001498005.2| PREDICTED: ras-related protein Rab-4A-like [Equus caballus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|311271203|ref|XP_001925518.2| PREDICTED: ras-related protein Rab-4A-like [Sus scrofa]
gi|410975123|ref|XP_003993984.1| PREDICTED: ras-related protein Rab-4A isoform 1 [Felis catus]
gi|410975125|ref|XP_003993985.1| PREDICTED: ras-related protein Rab-4A isoform 2 [Felis catus]
gi|417397315|gb|JAA45691.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|149043179|gb|EDL96711.1| RAB4A, member RAS oncogene family [Rattus norvegicus]
Length = 158
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|77404180|ref|NP_037151.2| ras-related protein Rab-4A [Rattus norvegicus]
gi|38303943|gb|AAH62016.1| RAB4A, member RAS oncogene family [Rattus norvegicus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|84579867|ref|NP_001033774.1| ras-related protein Rab-4A [Bos taurus]
gi|240849289|ref|NP_001155335.1| ras-related protein Rab-4A [Ovis aries]
gi|83759139|gb|AAI10199.1| RAB4A, member RAS oncogene family [Bos taurus]
gi|238566742|gb|ACR46626.1| RAB4A [Ovis aries]
gi|296472279|tpg|DAA14394.1| TPA: ras-related protein Rab-4A [Bos taurus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|318270757|ref|NP_001188141.1| ras-related protein Rab-4B [Ictalurus punctatus]
gi|308323203|gb|ADO28738.1| ras-related protein rab-4b [Ictalurus punctatus]
Length = 213
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|410909864|ref|XP_003968410.1| PREDICTED: ras-related protein Rab-4B-like [Takifugu rubripes]
Length = 213
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|348526698|ref|XP_003450856.1| PREDICTED: ras-related protein Rab-4B-like [Oreochromis niloticus]
Length = 213
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|348575568|ref|XP_003473560.1| PREDICTED: ras-related protein Rab-4A-like [Cavia porcellus]
Length = 218
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|126329307|ref|XP_001364508.1| PREDICTED: ras-related protein Rab-4B-like [Monodelphis domestica]
Length = 213
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|346470403|gb|AEO35046.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG G GKSCLLHQF E KF + HTIGVEFG++++ V G +KLQIWD
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK+++IG G GKSCLLHQF E K+
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|57524538|ref|NP_001004002.1| ras-related protein Rab-4B [Danio rerio]
gi|62901076|sp|Q68EK7.1|RAB4B_DANRE RecName: Full=Ras-related protein Rab-4B
gi|51330885|gb|AAH80219.1| Zgc:101015 [Danio rerio]
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|148679807|gb|EDL11754.1| RAB4A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 188
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 47 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 106
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 107 TAGQERFRSVTRSYYRGAAGALLVYDIT 134
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 47 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 76
>gi|187951075|gb|AAI38509.1| RAB4A, member RAS oncogene family [Mus musculus]
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|148224903|ref|NP_001080671.1| RAB4A, member RAS oncogene family [Xenopus laevis]
gi|27924185|gb|AAH44974.1| Rab4a-prov protein [Xenopus laevis]
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKFKQDSNHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIA 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKF 33
>gi|29337213|sp|P20338.2|RAB4A_HUMAN RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|160222046|sp|P05714.2|RAB4A_RAT RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|119590297|gb|EAW69891.1| RAB4A, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 176
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|427787247|gb|JAA59075.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 212
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG G GKSCLLHQF E KF + HTIGVEFG++++ V G +KLQIWD
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK+++IG G GKSCLLHQF E K+
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|90103015|sp|Q2TBH7.2|RAB4A_BOVIN RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|550068|gb|AAA60244.1| GTP-binding protein [Homo sapiens]
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|289741387|gb|ADD19441.1| GTPase Rab4 [Glossina morsitans morsitans]
Length = 214
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIENKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIENKF 33
>gi|62897579|dbj|BAD96729.1| RAB4A, member RAS oncogene family variant [Homo sapiens]
Length = 218
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKGDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|344298301|ref|XP_003420832.1| PREDICTED: ras-related protein Rab-4B-like [Loxodonta africana]
Length = 218
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 9 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 38
>gi|170049667|ref|XP_001857982.1| ras-related protein [Culex quinquefasciatus]
gi|167871403|gb|EDS34786.1| ras-related protein [Culex quinquefasciatus]
Length = 227
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 71/86 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ IKLQIWD
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVID 167
TAGQERFR+VTRSYYRGAAGAL+V D
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYD 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKF 33
>gi|148692254|gb|EDL24201.1| RAB4B, member RAS oncogene family [Mus musculus]
Length = 214
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 5 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 65 TAGQERFRSVTRSYYRGAAGALLVYDIT 92
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 5 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 34
>gi|291412180|ref|XP_002722362.1| PREDICTED: ras-related GTP-binding protein 4b [Oryctolagus
cuniculus]
Length = 213
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|201066145|gb|ACH92482.1| FI09101p [Drosophila melanogaster]
Length = 257
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 48 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 107
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 108 TAGQERFRSVTRSYYRGAAGALLVYDAT 135
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 4/39 (10%)
Query: 2 KTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
KTMS + Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 43 KTMSET----YDYLFKFLIIGSAGSGKSCLLHHFIESKF 77
>gi|159024328|gb|ABW87378.1| small GTP-binding protein Rab4 [Aiptasia pulchella]
Length = 217
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG G GKSC+LHQF E KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIINVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIS 91
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG G GKSC+LHQF E K+
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIEGKF 33
>gi|15986733|gb|AAL11725.1|AF408432_1 GTP-binding protein RAB4 [Mus musculus]
Length = 213
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|73535777|pdb|1Z0K|A Chain A, Structure Of Gtp-Bound Rab4q67l Gtpase In Complex With The
Central Rab Binding Domain Of Rabenosyn-5
gi|73535779|pdb|1Z0K|C Chain C, Structure Of Gtp-Bound Rab4q67l Gtpase In Complex With The
Central Rab Binding Domain Of Rabenosyn-5
Length = 172
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 76/91 (83%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G +Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQ
Sbjct: 1 GSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 60
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAG ERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 IWDTAGLERFRSVTRSYYRGAAGALLVYDIT 91
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
G +Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 1 GSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|410330929|gb|JAA34411.1| RAB4B, member RAS oncogene family [Pan troglodytes]
Length = 221
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 12 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDIT 99
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 12 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 41
>gi|54792729|ref|NP_001003275.1| ras-related protein Rab-4B [Canis lupus familiaris]
gi|82659107|ref|NP_057238.3| ras-related protein Rab-4B [Homo sapiens]
gi|190360735|ref|NP_001121979.1| ras-related protein Rab-4B [Bos taurus]
gi|194215473|ref|XP_001499461.2| PREDICTED: ras-related protein Rab-4B-like [Equus caballus]
gi|301776645|ref|XP_002923738.1| PREDICTED: ras-related protein Rab-4B-like [Ailuropoda melanoleuca]
gi|311257582|ref|XP_003127192.1| PREDICTED: ras-related protein Rab-4B-like isoform 2 [Sus scrofa]
gi|348552490|ref|XP_003462060.1| PREDICTED: ras-related protein Rab-4B-like [Cavia porcellus]
gi|350585214|ref|XP_003481903.1| PREDICTED: ras-related protein Rab-4B-like [Sus scrofa]
gi|395859643|ref|XP_003802143.1| PREDICTED: ras-related protein Rab-4B [Otolemur garnettii]
gi|397482620|ref|XP_003812518.1| PREDICTED: ras-related protein Rab-4B [Pan paniscus]
gi|402905614|ref|XP_003915611.1| PREDICTED: ras-related protein Rab-4B [Papio anubis]
gi|403305336|ref|XP_003943223.1| PREDICTED: ras-related protein Rab-4B [Saimiri boliviensis
boliviensis]
gi|410983000|ref|XP_003997832.1| PREDICTED: ras-related protein Rab-4B [Felis catus]
gi|426242915|ref|XP_004015314.1| PREDICTED: ras-related protein Rab-4B [Ovis aries]
gi|46577634|sp|P61017.1|RAB4B_CANFA RecName: Full=Ras-related protein Rab-4B
gi|46577635|sp|P61018.1|RAB4B_HUMAN RecName: Full=Ras-related protein Rab-4B
gi|5640004|gb|AAD45923.1|AF165522_1 ras-related GTP-binding protein 4b [Homo sapiens]
gi|20379046|gb|AAM21083.1|AF498935_1 small GTP binding protein RAB4B [Homo sapiens]
gi|919|emb|CAA39800.1| rab4b [Canis lupus familiaris]
gi|28422140|gb|AAH46927.1| RAB4B, member RAS oncogene family [Homo sapiens]
gi|119577405|gb|EAW57001.1| hCG2044074, isoform CRA_b [Homo sapiens]
gi|119577410|gb|EAW57006.1| hCG1995540, isoform CRA_c [Homo sapiens]
gi|158455121|gb|AAI22835.2| RAB4B protein [Bos taurus]
gi|190690531|gb|ACE87040.1| RAB4B, member RAS oncogene family protein [synthetic construct]
gi|190691899|gb|ACE87724.1| RAB4B, member RAS oncogene family protein [synthetic construct]
gi|312151204|gb|ADQ32114.1| RAB4B, member RAS oncogene family [synthetic construct]
gi|380785613|gb|AFE64682.1| ras-related protein Rab-4B [Macaca mulatta]
gi|383419263|gb|AFH32845.1| ras-related protein Rab-4B [Macaca mulatta]
gi|384947736|gb|AFI37473.1| ras-related protein Rab-4B [Macaca mulatta]
gi|410217904|gb|JAA06171.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|410248748|gb|JAA12341.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|410288734|gb|JAA22967.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|417397229|gb|JAA45648.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 213
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|8394136|ref|NP_059051.1| ras-related protein Rab-4B [Rattus norvegicus]
gi|21313012|ref|NP_083667.1| ras-related protein Rab-4B [Mus musculus]
gi|1710026|sp|P51146.1|RAB4B_RAT RecName: Full=Ras-related protein Rab-4B
gi|46577105|sp|Q91ZR1.2|RAB4B_MOUSE RecName: Full=Ras-related protein Rab-4B
gi|929830|emb|CAA55339.1| ras-homologous GTPase rab4b [Rattus norvegicus]
gi|12837780|dbj|BAB23948.1| unnamed protein product [Mus musculus]
gi|13938060|gb|AAH07147.1| RAB4B, member RAS oncogene family [Mus musculus]
gi|66794563|gb|AAH96654.1| RAB4B, member RAS oncogene family [Mus musculus]
gi|74215321|dbj|BAE41875.1| unnamed protein product [Mus musculus]
gi|112292953|dbj|BAF02854.1| Rab4B [Mus musculus]
gi|149056539|gb|EDM07970.1| RAB4B, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|351715409|gb|EHB18328.1| Ras-related protein Rab-4B, partial [Heterocephalus glaber]
Length = 232
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G S ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQ
Sbjct: 14 GHISSDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 73
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 74 IWDTAGQERFRSVTRSYYRGAAGALLVYDIT 104
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
G S ++FK+++IG G GKSCLLHQF E K+
Sbjct: 14 GHISSDFLFKFLVIGSAGTGKSCLLHQFIENKF 46
>gi|17647849|ref|NP_523777.1| Rab4, isoform B [Drosophila melanogaster]
gi|24654467|ref|NP_725696.1| Rab4, isoform A [Drosophila melanogaster]
gi|194755864|ref|XP_001960199.1| GF11646 [Drosophila ananassae]
gi|194880774|ref|XP_001974537.1| GG21802 [Drosophila erecta]
gi|195150545|ref|XP_002016211.1| GL11470 [Drosophila persimilis]
gi|195335295|ref|XP_002034310.1| GM21805 [Drosophila sechellia]
gi|195487842|ref|XP_002092063.1| GE11879 [Drosophila yakuba]
gi|195584276|ref|XP_002081940.1| GD11294 [Drosophila simulans]
gi|198457357|ref|XP_001360633.2| GA18527 [Drosophila pseudoobscura pseudoobscura]
gi|6561901|dbj|BAA88243.1| Rab4 protein [Drosophila melanogaster]
gi|7302753|gb|AAF57831.1| Rab4, isoform A [Drosophila melanogaster]
gi|21627057|gb|AAM68480.1| Rab4, isoform B [Drosophila melanogaster]
gi|190621497|gb|EDV37021.1| GF11646 [Drosophila ananassae]
gi|190657724|gb|EDV54937.1| GG21802 [Drosophila erecta]
gi|194110058|gb|EDW32101.1| GL11470 [Drosophila persimilis]
gi|194126280|gb|EDW48323.1| GM21805 [Drosophila sechellia]
gi|194178164|gb|EDW91775.1| GE11879 [Drosophila yakuba]
gi|194193949|gb|EDX07525.1| GD11294 [Drosophila simulans]
gi|198135948|gb|EAL25208.2| GA18527 [Drosophila pseudoobscura pseudoobscura]
Length = 213
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDAT 91
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKF 33
>gi|157126156|ref|XP_001660824.1| ras-related protein, putative [Aedes aegypti]
gi|108873366|gb|EAT37591.1| AAEL010430-PA [Aedes aegypti]
Length = 222
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 71/87 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ IKLQIWDT
Sbjct: 5 YDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 5 YDYLFKFLIIGRAGSGKSCLLHHFIENKF 33
>gi|164612813|gb|ABY63655.1| Rab GTPase 2a [Euplotes octocarinatus]
Length = 222
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG R +E++GE IKLQIWD
Sbjct: 3 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRTQHDLTIGVEFGARAVEINGETIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE F+++TRSYYRGAAGAL+V D++
Sbjct: 63 TAGQESFKSITRSYYRGAAGALLVYDITR 91
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SYSY+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 3 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRTQHDLT 39
>gi|195425455|ref|XP_002061020.1| GK10719 [Drosophila willistoni]
gi|194157105|gb|EDW72006.1| GK10719 [Drosophila willistoni]
Length = 213
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKF 33
>gi|195023648|ref|XP_001985725.1| GH20926 [Drosophila grimshawi]
gi|193901725|gb|EDW00592.1| GH20926 [Drosophila grimshawi]
Length = 213
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKF 33
>gi|443731104|gb|ELU16342.1| hypothetical protein CAPTEDRAFT_192455 [Capitella teleta]
Length = 211
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK+++IG G GKSC+LHQF E KF D HTIGVEFG++++ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLVIGSAGTGKSCILHQFIESKFKQDSNHTIGVEFGSKVVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK+++IG G GKSC+LHQF E K+
Sbjct: 4 TYDYLFKFLVIGSAGTGKSCILHQFIESKF 33
>gi|195380842|ref|XP_002049170.1| GJ21435 [Drosophila virilis]
gi|194143967|gb|EDW60363.1| GJ21435 [Drosophila virilis]
Length = 213
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D +
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTT 91
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKF 33
>gi|340381310|ref|XP_003389164.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Amphimedon
queenslandica]
Length = 217
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|441656173|ref|XP_004091101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-4B
[Nomascus leucogenys]
Length = 181
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|345798851|ref|XP_536353.3| PREDICTED: ras-related protein Rab-4A [Canis lupus familiaris]
Length = 218
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 77/93 (82%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S + Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +K
Sbjct: 4 SVSESDYYFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVK 63
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S + Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 SVSESDYYFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|3024519|sp|P56371.1|RAB4A_MOUSE RecName: Full=Ras-related protein Rab-4A
gi|2706878|dbj|BAA24034.1| rab 4 [Mus musculus]
Length = 213
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIG+EFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|195124760|ref|XP_002006855.1| GI18364 [Drosophila mojavensis]
gi|193911923|gb|EDW10790.1| GI18364 [Drosophila mojavensis]
Length = 213
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/86 (70%), Positives = 71/86 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GKSCLLH F E KF D HTIGVEFG+RI+ V G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVID 167
TAGQERFR+VTRSYYRGAAGAL+V D
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYD 89
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK++IIG G GKSCLLH F E K+
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKF 33
>gi|354468869|ref|XP_003496873.1| PREDICTED: ras-related protein Rab-4A-like [Cricetulus griseus]
Length = 218
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 76/93 (81%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +K
Sbjct: 4 SSDSQPLDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVK 63
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SS ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 SSDSQPLDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|147899878|ref|NP_001087008.1| RAB4B member RAS oncogene family [Xenopus laevis]
gi|50416282|gb|AAH77886.1| Rab14-prov protein [Xenopus laevis]
Length = 213
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+RI+ V + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKFKQDSNHTIGVEFGSRIVNVASKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIA 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKF 33
>gi|387018008|gb|AFJ51122.1| ras-related protein rab-4b [Crotalus adamanteus]
Length = 213
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG++++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGAGKSCLLHQFIESKFKQDSNHTIGVEFGSKVVTVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGAGKSCLLHQFIESKF 33
>gi|426388805|ref|XP_004060823.1| PREDICTED: ras-related protein Rab-4B [Gorilla gorilla gorilla]
Length = 185
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|301772340|ref|XP_002921593.1| PREDICTED: ras-related protein Rab-4A-like [Ailuropoda melanoleuca]
Length = 304
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 80/96 (83%), Gaps = 4/96 (4%)
Query: 74 KMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE 133
K+S++G ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+
Sbjct: 91 KLSTTG----DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK 146
Query: 134 KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+KLQIWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 147 YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIT 182
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 97 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 124
>gi|290980783|ref|XP_002673111.1| rab family small GTPase [Naegleria gruberi]
gi|284086692|gb|EFC40367.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+++KLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|332855845|ref|XP_003316422.1| PREDICTED: ras-related protein Rab-4B [Pan troglodytes]
Length = 219
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|327276363|ref|XP_003222939.1| PREDICTED: ras-related protein Rab-4B-like [Anolis carolinensis]
Length = 406
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG++++ V G+ +KLQIWD
Sbjct: 197 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSKVVNVGGKTVKLQIWD 256
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 257 TAGQERFRSVTRSYYRGAAGALLVYDIT 284
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ S+ +Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 187 LPPTESAMSETYDFLFKFLVIGSAGTGKSCLLHQFIENKF 226
>gi|312382073|gb|EFR27648.1| hypothetical protein AND_05520 [Anopheles darlingi]
Length = 182
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|354486278|ref|XP_003505308.1| PREDICTED: ras-related protein Rab-4B-like [Cricetulus griseus]
Length = 228
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 73/87 (83%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDT
Sbjct: 20 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVTVGGKTVKLQIWDT 79
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 80 AGQERFRSVTRSYYRGAAGALLVYDIT 106
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 20 YDFLFKFLVIGSAGTGKSCLLHQFIENKF 48
>gi|92098401|gb|AAI14772.1| RAB4A, member RAS oncogene family [Bos taurus]
Length = 218
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAG L+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGELLVYDIT 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|395529334|ref|XP_003766771.1| PREDICTED: ras-related protein Rab-4B [Sarcophilus harrisii]
Length = 229
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 20 SPDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 79
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 80 TAGQERFRSVTRSYYRGAAGALLVYDIT 107
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S ++FK+++IG G GKSCLLHQF E K+
Sbjct: 20 SPDFLFKFLVIGSAGTGKSCLLHQFIENKF 49
>gi|225709940|gb|ACO10816.1| Ras-related protein Rab-2 [Caligus rogercresseyi]
Length = 212
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|325181703|emb|CCA16157.1| Rab2 family GTPase putative [Albugo laibachii Nc14]
Length = 586
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/93 (65%), Positives = 77/93 (82%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+ SY+++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IK
Sbjct: 373 STSIMSYAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIESKQIK 432
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
LQIWDTAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 433 LQIWDTAGQESFRSITRSYYRGAAGALLVYDIT 465
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S+ SY+++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 373 STSIMSYAFLFKYIIIGDTGVGKSCLLLQFTDKRF 407
>gi|326436079|gb|EGD81649.1| whole genome shotgun sequence assembly [Salpingoeca sp. ATCC 50818]
Length = 209
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ GKSC+LHQF E KF D HTIGVEFG+++I G+ +KLQ+WD
Sbjct: 4 SYDFLFKFLVIGNANTGKSCILHQFIENKFKSDSTHTIGVEFGSKVINCGGKSVKLQVWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAGAL+V D+S+
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISN 92
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ GKSC+LHQF E K+
Sbjct: 4 SYDFLFKFLVIGNANTGKSCILHQFIENKF 33
>gi|74096301|ref|NP_001027632.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
gi|28556900|dbj|BAC57527.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
Length = 176
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G +IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGRQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|156389663|ref|XP_001635110.1| predicted protein [Nematostella vectensis]
gi|156222200|gb|EDO43047.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSC+LHQF E KF D HTIGVEFG++I+ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIS 91
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSC+LHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCILHQFIEGKF 33
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225714638|gb|ACO13165.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
gi|290562553|gb|ADD38672.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225713134|gb|ACO12413.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIEGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|339522177|gb|AEJ84253.1| Ras-related protein Rab-4A [Capra hircus]
Length = 213
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+V RSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVRRSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|308321550|gb|ADO27926.1| ras-related protein rab-4b [Ictalurus furcatus]
Length = 213
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 72/87 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGITVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDV 168
TAGQERFR+VTRSYYRGAAGAL+V D+
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDI 90
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|115653131|ref|XP_791693.2| PREDICTED: ras-related protein Rab-4B-like [Strongylocentrotus
purpuratus]
Length = 210
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG G GKSC+LHQF E KF D HTIGVEFG++II G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKFKQDSNHTIGVEFGSKIINAGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG G GKSC+LHQF E K+
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKF 33
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|334322160|ref|XP_001379061.2| PREDICTED: ras-related protein Rab-4A-like [Monodelphis domestica]
Length = 233
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 26 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 85
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 86 GQERFRSVTRSYYRGAAGALLVYDIT 111
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 26 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 53
>gi|307110175|gb|EFN58411.1| GTP-binding protein YPTC4 [Chlorella variabilis]
Length = 217
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|327262200|ref|XP_003215913.1| PREDICTED: ras-related protein Rab-4A-like [Anolis carolinensis]
Length = 271
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 64 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 123
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 124 GQERFRSVTRSYYRGAAGALLVYDIT 149
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 64 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 91
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|74211389|dbj|BAE26447.1| unnamed protein product [Mus musculus]
Length = 218
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQ RFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQGRFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>gi|326915557|ref|XP_003204082.1| PREDICTED: ras-related protein Rab-4A-like, partial [Meleagris
gallopavo]
Length = 207
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 74/85 (87%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTAG
Sbjct: 1 FLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG 60
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 QERFRSVTRSYYRGAAGALLVYDIT 85
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 24/27 (88%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 1 FLFKFLVIGNAGTGKSCLLHQFIEKKF 27
>gi|45708726|gb|AAH33081.1| RAB4B protein [Homo sapiens]
gi|119577407|gb|EAW57003.1| hCG2044074, isoform CRA_d [Homo sapiens]
gi|119577409|gb|EAW57005.1| hCG1995540, isoform CRA_b [Homo sapiens]
Length = 121
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 74/90 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITRA 93
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|449278080|gb|EMC86047.1| Ras-related protein Rab-4A, partial [Columba livia]
Length = 212
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 5 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 64
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 65 GQERFRSVTRSYYRGAAGALLVYDIT 90
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 5 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 32
>gi|355746311|gb|EHH50936.1| hypothetical protein EGM_01844, partial [Macaca fascicularis]
Length = 209
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 28
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225711860|gb|ACO11776.1| Ras-related protein Rab-4B [Lepeophtheirus salmonis]
Length = 217
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 74/87 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+++IG G GKSCLLHQF E +++ D HTIGVEFG+R++ V G+ +KLQIWDT
Sbjct: 5 YDYLFKFLVIGSAGTGKSCLLHQFIEGRYLDDSRHTIGVEFGSRVLPVGGKTVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDIA 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y Y+FK+++IG G GKSCLLHQF E +Y
Sbjct: 5 YDYLFKFLVIGSAGTGKSCLLHQFIEGRYL 34
>gi|47200511|emb|CAG13665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 253
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 68/71 (95%)
Query: 94 DMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTR 153
+M VG+ C++HQFTE+KFM DCPHTIGVEFGTRI+EVHG+K+KLQIWDTAGQERFRAVTR
Sbjct: 1 EMVVGEWCVVHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWDTAGQERFRAVTR 60
Query: 154 SYYRGAAGALM 164
SYYRGAAGALM
Sbjct: 61 SYYRGAAGALM 71
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|190702475|gb|ACE75361.1| ras-related protein Rab-2 [Glyptapanteles indiensis]
Length = 214
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|355559189|gb|EHH15969.1| hypothetical protein EGK_02156, partial [Macaca mulatta]
Length = 209
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 28
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|156371397|ref|XP_001628750.1| predicted protein [Nematostella vectensis]
gi|156215735|gb|EDO36687.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|431920194|gb|ELK18233.1| Ras-related protein Rab-4B [Pteropus alecto]
Length = 219
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 73/91 (80%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQ
Sbjct: 7 GSICSDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 66
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 67 IWDTAGQERFRSVTRSYYRGAAGALLVYDIT 97
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
G ++FK+++IG G GKSCLLHQF E K+
Sbjct: 7 GSICSDFLFKFLVIGSAGTGKSCLLHQFIENKF 39
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|156555012|ref|XP_001603108.1| PREDICTED: ras-related protein Rab-2-like [Nasonia vitripennis]
Length = 214
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|122921420|pdb|2O52|A Chain A, Crystal Structure Of Human Rab4b In Complex With Gdp
gi|122921421|pdb|2O52|B Chain B, Crystal Structure Of Human Rab4b In Complex With Gdp
Length = 200
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTA
Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDIT 108
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKF 50
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 6 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 66 TAGQESFRSITRSYYRGAAGALLVYDITR 94
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 6 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 35
>gi|47225037|emb|CAF97452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 233
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 72/85 (84%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTAG
Sbjct: 3 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 62
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRGAAGAL+V D++
Sbjct: 63 QERFRSVTRSYYRGAAGALLVYDIT 87
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 3 FLFKFLVIGSAGTGKSCLLHQFIENKF 29
>gi|147900614|ref|NP_001090137.1| RAB2A, member RAS oncogene family [Xenopus laevis]
gi|83318436|gb|AAI08552.1| MGC131016 protein [Xenopus laevis]
Length = 228
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|149061036|gb|EDM11646.1| RAB2, member RAS oncogene family [Rattus norvegicus]
Length = 162
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|281337299|gb|EFB12883.1| hypothetical protein PANDA_010496 [Ailuropoda melanoleuca]
Length = 219
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 28
>gi|344286688|ref|XP_003415089.1| PREDICTED: ras-related protein Rab-4A-like [Loxodonta africana]
Length = 249
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 42 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 101
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 102 GQERFRSVTRSYYRGAAGALLVYDIT 127
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 42 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 69
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|297297438|ref|XP_001096730.2| PREDICTED: ras-related protein Rab-2B-like [Macaca mulatta]
Length = 190
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|291225089|ref|XP_002732535.1| PREDICTED: ras-related protein Rab-4B-like [Saccoglossus
kowalevskii]
Length = 210
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG G GKSC+LHQF E KF + HTIGVEFG++++ V G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKFKQESNHTIGVEFGSKVVNVGGKSVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG G GKSC+LHQF E K+
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKF 33
>gi|281340730|gb|EFB16314.1| hypothetical protein PANDA_012940 [Ailuropoda melanoleuca]
Length = 208
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 1 DFLFKFLVIGSAGTGKSCLLHQFIENKF 28
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|34194035|gb|AAH56535.1| Rab4a protein, partial [Danio rerio]
Length = 217
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E++F D HTIGVEFG++II V + +KLQIWD
Sbjct: 8 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 67
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 68 TAGQERFRSVTRSYYRGAAGALLVYDIT 95
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 8 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 37
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|395531649|ref|XP_003767887.1| PREDICTED: ras-related protein Rab-4A [Sarcophilus harrisii]
Length = 249
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+ ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 40 NQDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 99
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 100 TAGQERFRSVTRSYYRGAAGALLVYDIT 127
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 40 NQDFLFKFLVIGNAGTGKSCLLHQFIEKKF 69
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|355714890|gb|AES05151.1| RAB2B, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 7 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 67 TAGQESFRSITRSYYRGAAGALLVYDITR 95
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 7 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 36
>gi|90075602|dbj|BAE87481.1| unnamed protein product [Macaca fascicularis]
Length = 161
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|226823210|ref|NP_001119853.1| ras-related protein Rab-4A [Danio rerio]
gi|62901087|sp|Q6PHI9.2|RAB4A_DANRE RecName: Full=Ras-related protein Rab-4A
gi|190338615|gb|AAI63901.1| RAB4a, member RAS oncogene family [Danio rerio]
gi|190338617|gb|AAI63906.1| RAB4a, member RAS oncogene family [Danio rerio]
Length = 213
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E++F D HTIGVEFG++II V + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 33
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|33150586|gb|AAP97171.1|AF087861_1 rab4b [Homo sapiens]
Length = 213
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 72/85 (84%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTAG
Sbjct: 7 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 66
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRGAAGAL+V D++
Sbjct: 67 QERFRSVTRSYYRGAAGALLVYDIT 91
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 7 FLFKFLVIGSAGTGKSCLLHQFIENKF 33
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 1 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 60
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 61 TAGQESFRSITRSYYRGAAGALLVYDIT 88
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 1 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>gi|54696256|gb|AAV38500.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368765|gb|AAX43233.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|66501172|ref|XP_392651.2| PREDICTED: ras-related protein Rab-2-like [Apis mellifera]
gi|340709425|ref|XP_003393310.1| PREDICTED: ras-related protein Rab-2-like [Bombus terrestris]
gi|350407122|ref|XP_003487992.1| PREDICTED: ras-related protein Rab-2-like [Bombus impatiens]
gi|380017536|ref|XP_003692709.1| PREDICTED: ras-related protein Rab-2-like isoform 1 [Apis florea]
Length = 214
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|402875596|ref|XP_003901586.1| PREDICTED: ras-related protein Rab-2B [Papio anubis]
gi|355693102|gb|EHH27705.1| hypothetical protein EGK_17973 [Macaca mulatta]
gi|355778380|gb|EHH63416.1| hypothetical protein EGM_16382 [Macaca fascicularis]
gi|380817346|gb|AFE80547.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|383422287|gb|AFH34357.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|384949918|gb|AFI38564.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
Length = 216
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|21361884|ref|NP_116235.2| ras-related protein Rab-2B isoform 1 [Homo sapiens]
gi|296214433|ref|XP_002753820.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Callithrix
jacchus]
gi|332223471|ref|XP_003260896.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Nomascus
leucogenys]
gi|332841820|ref|XP_003314293.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Pan troglodytes]
gi|397466079|ref|XP_003804800.1| PREDICTED: ras-related protein Rab-2B [Pan paniscus]
gi|426376304|ref|XP_004054944.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Gorilla gorilla
gorilla]
gi|28436385|sp|Q8WUD1.1|RAB2B_HUMAN RecName: Full=Ras-related protein Rab-2B
gi|18088786|gb|AAH20839.1| RAB2B, member RAS oncogene family [Homo sapiens]
gi|119586786|gb|EAW66382.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119586787|gb|EAW66383.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123993135|gb|ABM84169.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|124000125|gb|ABM87571.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|189067491|dbj|BAG37750.1| unnamed protein product [Homo sapiens]
gi|410220922|gb|JAA07680.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220924|gb|JAA07681.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220926|gb|JAA07682.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220928|gb|JAA07683.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220930|gb|JAA07684.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410268158|gb|JAA22045.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410328337|gb|JAA33115.1| RAB2B, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|196012040|ref|XP_002115883.1| hypothetical protein TRIADDRAFT_59761 [Trichoplax adhaerens]
gi|190581659|gb|EDV21735.1| hypothetical protein TRIADDRAFT_59761 [Trichoplax adhaerens]
Length = 214
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++ K++IIG G GKSCLLHQF E KF D HTIGVEFG+++I + +KLQIWD
Sbjct: 5 SYDFLLKFLIIGSAGTGKSCLLHQFIENKFKQDSSHTIGVEFGSKVINCSNKTVKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VT+SYYRGAAGAL+V D+S+
Sbjct: 65 TAGQERFRSVTKSYYRGAAGALLVYDISN 93
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++ K++IIG G GKSCLLHQF E K+
Sbjct: 5 SYDFLLKFLIIGSAGTGKSCLLHQFIENKF 34
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|300122550|emb|CBK23119.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + +IKLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIGENQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|291413362|ref|XP_002722943.1| PREDICTED: RAB4A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 235
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTA
Sbjct: 28 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 87
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 88 GQERFRSVTRSYYRGAAGALLVYDIT 113
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 28 DFLFKFLVIGNAGTGKSCLLHQFIEKKF 55
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|410912076|ref|XP_003969516.1| PREDICTED: ras-related protein Rab-4A-like [Takifugu rubripes]
Length = 213
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ G GKSCLLHQF E++F + HTIGVEFG++II V + +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIINVVSKMVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 33
>gi|395861634|ref|XP_003803086.1| PREDICTED: ras-related protein Rab-2B [Otolemur garnettii]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|116734835|ref|NP_001068822.1| ras-related protein Rab-2A [Bos taurus]
gi|109939903|gb|AAI18272.1| RAB2A, member RAS oncogene family [Bos taurus]
gi|296480621|tpg|DAA22736.1| TPA: RAB2A, member RAS oncogene family [Bos taurus]
Length = 189
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|57010|emb|CAA30006.1| unnamed protein product [Rattus sp.]
Length = 213
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG +II V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGQKIINVGGKYVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VT SYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTTSYYRGAAGALLVYDIT 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 33
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|348534150|ref|XP_003454566.1| PREDICTED: ras-related protein Rab-4A-like [Oreochromis niloticus]
gi|432852543|ref|XP_004067300.1| PREDICTED: ras-related protein Rab-4A-like [Oryzias latipes]
Length = 213
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ G GKSCLLHQF E++F + HTIGVEFG++II V + +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIISVVNKMVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 33
>gi|395745671|ref|XP_003778310.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2B [Pongo
abelii]
Length = 222
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|449272944|gb|EMC82600.1| Ras-related protein Rab-4B, partial [Columba livia]
Length = 137
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 72/86 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG++++ V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSKVVNVGGKTVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 1 DFLFKFLVIGSAGTGKSCLLHQFIENKF 28
>gi|403264896|ref|XP_003924702.1| PREDICTED: ras-related protein Rab-2B [Saimiri boliviensis
boliviensis]
Length = 186
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225706796|gb|ACO09244.1| Ras-related protein Rab-4A [Osmerus mordax]
Length = 213
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E++F D HTIGVEFG++II V + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 33
>gi|311261052|ref|XP_003128612.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Sus scrofa]
Length = 216
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|10441901|gb|AAG17228.1|AF217985_1 unknown [Homo sapiens]
gi|119577404|gb|EAW57000.1| hCG2044074, isoform CRA_a [Homo sapiens]
gi|119577408|gb|EAW57004.1| hCG1995540, isoform CRA_a [Homo sapiens]
Length = 248
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 72/86 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTA
Sbjct: 41 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 100
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 101 GQERFRSVTRSYYRGAAGALLVYDIT 126
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 41 DFLFKFLVIGSAGTGKSCLLHQFIENKF 68
>gi|241643394|ref|XP_002411061.1| RAS-related protein, putative [Ixodes scapularis]
gi|215503692|gb|EEC13186.1| RAS-related protein, putative [Ixodes scapularis]
Length = 217
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 71/86 (82%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
Y+FK+++IG G GKSCLLHQF E KF + HTIGVEFG++++ V G +KLQIWDTA
Sbjct: 11 DYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWDTA 70
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 71 GQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+FK+++IG G GKSCLLHQF E K+
Sbjct: 11 DYLFKFLVIGSAGTGKSCLLHQFIENKF 38
>gi|12837642|dbj|BAB23894.1| unnamed protein product [Mus musculus]
Length = 216
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|256074811|ref|XP_002573716.1| rab-2414 [Schistosoma mansoni]
gi|360043855|emb|CCD81401.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 196
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD VGKSCLL QFT+Q+F P TIGVEFG R++ + ++IKLQ+WD
Sbjct: 2 SYAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGDKQIKLQVWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V DV+
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDVTR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD VGKSCLL QFT+Q++
Sbjct: 2 SYAYLFKYIIIGDTAVGKSCLLLQFTDQRF 31
>gi|294463840|gb|ADE77443.1| unknown [Picea sitchensis]
Length = 234
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 75/91 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIRNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQE FR++TRSYYRGAAGAL+V D++ +
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRCQ 92
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|444732045|gb|ELW72369.1| Ras-related protein Rab-4B [Tupaia chinensis]
Length = 351
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 72/85 (84%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDTAG
Sbjct: 145 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 204
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRGAAGAL+V D++
Sbjct: 205 QERFRSVTRSYYRGAAGALLVYDIT 229
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSCLLHQF E K+
Sbjct: 145 FLFKFLVIGSAGTGKSCLLHQFIENKF 171
>gi|167519727|ref|XP_001744203.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777289|gb|EDQ90906.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK+++IG+ GKSCLLHQF E KF + HTIGVEFG++++ G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNASTGKSCLLHQFIESKFKSESSHTIGVEFGSKVVNCGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAGAL+V D+++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIAN 92
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK+++IG+ GKSCLLHQF E K+
Sbjct: 4 SYDFLFKFLVIGNASTGKSCLLHQFIESKF 33
>gi|126643983|ref|XP_001388160.1| Rab2 GTPase [Cryptosporidium parvum Iowa II]
gi|126117237|gb|EAZ51337.1| Rab2 GTPase, putative [Cryptosporidium parvum Iowa II]
Length = 185
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD VGKSCLL QFT+++F D TIGVEFG RII + +KIKLQIWDT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDRRFRVDHDLTIGVEFGARIINLDAKKIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 65 AGQESFRSITRSYYRGAAGALLVYDITR 92
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD VGKSCLL QFT++++ + LT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDRRFRVDHDLT 40
>gi|642121|gb|AAA61831.1| small GTP-binding protein [Oryza sativa Indica Group]
Length = 223
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|74143960|dbj|BAE41281.1| unnamed protein product [Mus musculus]
Length = 193
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|83415090|ref|NP_001032734.1| ras-related protein Rab-2B [Rattus norvegicus]
gi|77567746|gb|AAI07444.1| RAB2B, member RAS oncogene family [Rattus norvegicus]
gi|149033676|gb|EDL88474.1| rCG61209, isoform CRA_a [Rattus norvegicus]
gi|149033677|gb|EDL88475.1| rCG61209, isoform CRA_a [Rattus norvegicus]
Length = 215
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|30525051|ref|NP_766189.1| ras-related protein Rab-2B [Mus musculus]
gi|28380119|sp|P59279.1|RAB2B_MOUSE RecName: Full=Ras-related protein Rab-2B
gi|26332531|dbj|BAC29983.1| unnamed protein product [Mus musculus]
gi|26336258|dbj|BAC31814.1| unnamed protein product [Mus musculus]
gi|28278529|gb|AAH46334.1| RAB2B, member RAS oncogene family [Mus musculus]
gi|74180601|dbj|BAE35753.1| unnamed protein product [Mus musculus]
gi|74227753|dbj|BAE35713.1| unnamed protein product [Mus musculus]
gi|112292941|dbj|BAF02848.1| Rab2B [Mus musculus]
gi|148710302|gb|EDL42248.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148710303|gb|EDL42249.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|300798691|ref|NP_001179594.1| ras-related protein Rab-2B [Bos taurus]
gi|426232812|ref|XP_004010414.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Ovis aries]
gi|296483460|tpg|DAA25575.1| TPA: RAB2B protein-like [Bos taurus]
gi|440902097|gb|ELR52940.1| Ras-related protein Rab-2B [Bos grunniens mutus]
Length = 216
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P T+GVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|291399649|ref|XP_002716214.1| PREDICTED: RAB2A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+ D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLAYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|395546064|ref|XP_003774914.1| PREDICTED: ras-related protein Rab-2A-like [Sarcophilus harrisii]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVSIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|162460944|ref|NP_001106078.1| ras-related protein Rab-2-A [Zea mays]
gi|1346956|sp|P49103.1|RAB2A_MAIZE RecName: Full=Ras-related protein Rab-2-A
gi|722326|gb|AAA63901.1| GTP binding protein [Zea mays]
gi|414586805|tpg|DAA37376.1| TPA: ras protein Rab-2-A [Zea mays]
Length = 209
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ V G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDDKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|38524287|emb|CAD57744.1| RAB-like small G-protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ V G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + ++IKLQIWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
YSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRF 32
>gi|357149828|ref|XP_003575246.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|193875868|gb|ACF24570.1| Ras-related small GTPase Rab2 [Gymnochlora stellata]
Length = 213
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKQLIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|4837727|gb|AAD30658.1|AF083256_1 small GTP binding protein Rab2 [Sporobolus stapfianus]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|359497365|ref|XP_002269525.2| PREDICTED: ras-related protein Rab-2-B-like, partial [Vitis
vinifera]
gi|296085758|emb|CBI29569.3| unnamed protein product [Vitis vinifera]
Length = 102
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG RII + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARIITIDSKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY+Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ + S+PI K +
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARIITIDSKPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTI 119
W ++GQ S+ I + G G + L++ T F + H +
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAG---ALLVYDITRYHFYLNLSHAM 101
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDY-VCLRLVSTSQPITRKNL 67
+ Y Y+FK ++IGD GVGKS LL +FT ++ L + T R + S +
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVSTGAKNSRV 64
Query: 68 LWALVSKMSSSGQYS--YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGT 125
W + + +++IGD GVGKS LL +FT +F + TIGVEF T
Sbjct: 65 EWPIKLHPHHPPHLLCGVTSELAFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT 124
Query: 126 RIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
R IEV G+ IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 125 RSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 168
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGV+FG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVKFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|219363283|ref|NP_001136891.1| uncharacterized protein LOC100217047 [Zea mays]
gi|194697490|gb|ACF82829.1| unknown [Zea mays]
gi|413937511|gb|AFW72062.1| hypothetical protein ZEAMMB73_237423 [Zea mays]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIENKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKY IIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKY IIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYTIIGDTGVGKSCLLLQFTDKRF 31
>gi|115446975|ref|NP_001047267.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|46806275|dbj|BAD17483.1| putative GTP-binding protein yptm3 [Oryza sativa Japonica Group]
gi|113536798|dbj|BAF09181.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|125540069|gb|EAY86464.1| hypothetical protein OsI_07846 [Oryza sativa Indica Group]
gi|125582673|gb|EAZ23604.1| hypothetical protein OsJ_07304 [Oryza sativa Japonica Group]
gi|215686464|dbj|BAG87725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712319|dbj|BAG94446.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|307207076|gb|EFN84885.1| Ras-related protein Rab-2A [Harpegnathos saltator]
Length = 214
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|256074809|ref|XP_002573715.1| rab-2414 [Schistosoma mansoni]
gi|360043854|emb|CCD81400.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 216
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD VGKSCLL QFT+Q+F P TIGVEFG R++ + ++IKLQ+WD
Sbjct: 2 SYAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGDKQIKLQVWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V DV+
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDVTR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD VGKSCLL QFT+Q++
Sbjct: 2 SYAYLFKYIIIGDTAVGKSCLLLQFTDQRF 31
>gi|115458896|ref|NP_001053048.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|38344743|emb|CAE03047.2| OSJNBa0089K21.1 [Oryza sativa Japonica Group]
gi|113564619|dbj|BAF14962.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|116310017|emb|CAH67042.1| OSIGBa0124N08.4 [Oryza sativa Indica Group]
gi|125548663|gb|EAY94485.1| hypothetical protein OsI_16256 [Oryza sativa Indica Group]
gi|215765437|dbj|BAG87134.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629030|gb|EEE61162.1| hypothetical protein OsJ_15130 [Oryza sativa Japonica Group]
Length = 211
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I V +KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|326527045|dbj|BAK04464.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I V + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|321468798|gb|EFX79781.1| hypothetical protein DAPPUDRAFT_304304 [Daphnia pulex]
Length = 216
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
++ ++FK+++IG G GKSCLLH F E+KF D HTIGVEFG++I+ + G+++KLQIWD
Sbjct: 4 NFEFLFKFLVIGSAGTGKSCLLHHFIEKKFKQDSSHTIGVEFGSKIVTIGGKQVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERF++VT+SYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFKSVTKSYYRGAAGALLVYDIS 91
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ ++FK+++IG G GKSCLLH F E+K+
Sbjct: 4 NFEFLFKFLVIGSAGTGKSCLLHHFIEKKF 33
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|162461422|ref|NP_001105743.1| ras-like [Zea mays]
gi|2764802|emb|CAA54822.1| yptm3 [Zea mays]
gi|413922837|gb|AFW62769.1| ras protein Rab-2-A [Zea mays]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|242073412|ref|XP_002446642.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
gi|241937825|gb|EES10970.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|195605404|gb|ACG24532.1| ras-related protein Rab-2-A [Zea mays]
gi|223973609|gb|ACN30992.1| unknown [Zea mays]
Length = 209
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|89027976|gb|ABD59354.1| small GTP binding protein Rab2A [Saccharum officinarum]
gi|89027978|gb|ABD59355.1| small GTP binding protein Rab2A [Saccharum officinarum]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|82595062|ref|XP_725689.1| Rab2 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23480789|gb|EAA17254.1| putative Rab2 GTPase [Plasmodium yoelii yoelii]
Length = 213
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|163838698|ref|NP_001106234.1| ras-related protein Rab-2-B [Zea mays]
gi|1346957|sp|P49104.1|RAB2B_MAIZE RecName: Full=Ras-related protein Rab-2-B
gi|722328|gb|AAA63902.1| GTP binding protein [Zea mays]
gi|195647894|gb|ACG43415.1| ras-related protein Rab-2-A [Zea mays]
gi|224031795|gb|ACN34973.1| unknown [Zea mays]
gi|413918614|gb|AFW58546.1| ras protein Rab-2-B [Zea mays]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|118490878|ref|XP_001238748.1| rab2 gtpase, putative [Eimeria tenella strain Houghton]
gi|109238531|emb|CAK51495.1| rab2 gtpase, putative [Eimeria tenella]
Length = 91
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R++ + G +IKLQIWDT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRVDHDLTIGVEFGARLVSIDGRQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDISR 91
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ + LT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRVDHDLT 39
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|68068036|ref|XP_675931.1| Rab2 GTPase [Plasmodium berghei strain ANKA]
gi|70938894|ref|XP_740062.1| Rab2 GTPase [Plasmodium chabaudi chabaudi]
gi|56495388|emb|CAH95114.1| Rab2 GTPase, putative [Plasmodium berghei]
gi|56517511|emb|CAH84846.1| Rab2 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 213
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|47028315|gb|AAT09090.1| RAB2 [Bigelowiella natans]
Length = 215
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 3 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKQLIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVYDIT 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 3 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 32
>gi|73536134|pdb|2A5J|A Chain A, Crystal Structure Of Human Rab2b
Length = 191
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
SY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWDTA
Sbjct: 19 SYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTA 78
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVSH 170
GQE FR++TRSYYRGAAGAL+V D++
Sbjct: 79 GQESFRSITRSYYRGAAGALLVYDITR 105
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 26/28 (92%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 19 SYLFKYIIIGDTGVGKSCLLLQFTDKRF 46
>gi|242062134|ref|XP_002452356.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
gi|241932187|gb|EES05332.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|452820726|gb|EME27765.1| Rab family, other [Galdieria sulphuraria]
Length = 208
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FK+IIIGD GVGKSCLL QFT+++F P TIGVEFG +I+++ G+ IKLQIWD
Sbjct: 2 SYAYLFKFIIIGDSGVGKSCLLLQFTDKRFQPIHDLTIGVEFGAKIVQMDGKTIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FK+IIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKFIIIGDSGVGKSCLLLQFTDKRF 31
>gi|326528385|dbj|BAJ93381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|413922836|gb|AFW62768.1| hypothetical protein ZEAMMB73_212646, partial [Zea mays]
Length = 194
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|57547575|gb|AAW52512.1| small GTP-binding protein [Triticum aestivum]
Length = 210
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|112983258|ref|NP_001037612.1| GTP-binding protein RAB2 [Bombyx mori]
gi|99082890|gb|ABF66620.1| GTP-binding protein RAB2 [Bombyx mori]
Length = 214
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
T GQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TGGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|168022844|ref|XP_001763949.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162684954|gb|EDQ71353.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIENKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|156103415|ref|XP_001617400.1| small GTPase Rab2 [Plasmodium vivax Sal-1]
gi|148806274|gb|EDL47673.1| small GTPase Rab2, putative [Plasmodium vivax]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|320168147|gb|EFW45046.1| small GTP-binding protein Rab4 [Capsaspora owczarzaki ATCC 30864]
Length = 221
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 75/88 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+++IG+ GVGKSC+LH F E KF + HTIGVEFG++I ++ G+ +KLQIWDT
Sbjct: 5 YDYLFKFLVIGNAGVGKSCVLHSFLEGKFKQESSHTIGVEFGSKIAKLGGKTVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR+VTRSYYRGAAGAL+V D+++
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDITN 92
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK+++IG+ GVGKSC+LH F E K+
Sbjct: 5 YDYLFKFLVIGNAGVGKSCVLHSFLEGKF 33
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|124806378|ref|XP_001350706.1| Rab2, GTPase [Plasmodium falciparum 3D7]
gi|23496833|gb|AAN36386.1| Rab2, GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|332024209|gb|EGI64416.1| Ras-related protein Rab-2 [Acromyrmex echinatior]
Length = 194
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|221061627|ref|XP_002262383.1| rab2 gtpase [Plasmodium knowlesi strain H]
gi|193811533|emb|CAQ42261.1| rab2 gtpase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + +KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI+IGD GVGKSCLL QFT+ +F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI+IGD GVGKSCLL QFT+ ++
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDNRF 31
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|157874060|ref|XP_001685525.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
gi|68128597|emb|CAJ08729.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
Length = 211
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 73/87 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVSH 170
GQE FR++TRSYYRGA+GAL+V DV+
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTR 91
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|357164075|ref|XP_003579941.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|237830259|ref|XP_002364427.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962091|gb|EEA97286.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487500|gb|EEE25732.1| RAB-2,4,14, putative [Toxoplasma gondii GT1]
gi|221507298|gb|EEE32902.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii VEG]
Length = 214
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R++ + G ++KLQIWDT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLVSIAGRQVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLT 39
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|193624758|ref|XP_001951908.1| PREDICTED: ras-related protein Rab-2A-like [Acyrthosiphon pisum]
Length = 211
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVTIETKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|449532881|ref|XP_004173406.1| PREDICTED: ras-related protein Rab-2-B-like, partial [Cucumis
sativus]
Length = 89
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|89257641|gb|ABD65128.1| GTP-binding protein RAB2A, putative [Brassica oleracea]
Length = 192
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + +KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPLKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|401411449|ref|XP_003885172.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
gi|325119591|emb|CBZ55144.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
Length = 214
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R+I + G ++KLQIWDT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLISIAGRQVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLT 39
>gi|260831472|ref|XP_002610683.1| hypothetical protein BRAFLDRAFT_202673 [Branchiostoma floridae]
gi|229296050|gb|EEN66693.1| hypothetical protein BRAFLDRAFT_202673 [Branchiostoma floridae]
Length = 207
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG G GKSC+LHQF E KF D HTIGVEFG++++ V G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGAAGTGKSCILHQFIESKFKQDSSHTIGVEFGSKVVNVGGKSVKLQIWDTA 60
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDIT 86
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG G GKSC+LHQF E K+
Sbjct: 1 DFLFKFLVIGAAGTGKSCILHQFIESKF 28
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|13397937|emb|CAC34627.1| putative Rab2 GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD GVGKSCLL QFT+++F D TIGVEFG R++ + ++IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLVNLDNKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD GVGKSCLL QFT++++ LT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLT 39
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI+IGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI+IGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKRF 31
>gi|54311137|gb|AAH33312.1| RAB2B, member RAS oncogene family [Mus musculus]
Length = 216
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAA AL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAAALLVYDITR 90
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|320165325|gb|EFW42224.1| RAB2A [Capsaspora owczarzaki ATCC 30864]
Length = 219
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + +++KLQIWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKQLKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDIT 90
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
YSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRF 32
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 73/86 (84%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQE FR++TRSYYRGA+GAL+V DV+
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVT 90
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 72/87 (82%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGRSVKLQIWDTA 64
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVSH 170
GQE FR++TRSYYRGA+GAL+V DV+
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTR 91
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|198422724|ref|XP_002122160.1| PREDICTED: similar to Ras-related protein Rab-4B [Ciona
intestinalis]
Length = 217
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK+++IG GVGKSC+LHQ KF D HTIGVEFG+RI V G+ IKLQIWDT
Sbjct: 5 YDFLFKFLVIGSAGVGKSCVLHQLLNNKFNDDSTHTIGVEFGSRICNVGGKSIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR+VTRSYYRGAAGA++ D++
Sbjct: 65 AGQERFRSVTRSYYRGAAGAILCYDITR 92
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y ++FK+++IG GVGKSC+LHQ K+
Sbjct: 5 YDFLFKFLVIGSAGVGKSCVLHQLLNNKF 33
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|363808076|ref|NP_001241959.1| uncharacterized protein LOC100797461 [Glycine max]
gi|255639407|gb|ACU19999.1| unknown [Glycine max]
Length = 211
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDSRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVC-----LRLVS-TSQPITR 64
SY Y+FKYIIIGD GVGKSCLL QFT++++ Q D R+VS S+PI
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMVSIDSRPI-- 55
Query: 65 KNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
K +W ++GQ S+ I + G G
Sbjct: 56 KLQIW------DTAGQESFRSITRSYYRGAAGA 82
>gi|146096690|ref|XP_001467894.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|398020934|ref|XP_003863630.1| ras-related protein rab-2a, putative [Leishmania donovani]
gi|134072260|emb|CAM70965.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|322501863|emb|CBZ36946.1| ras-related protein rab-2a, putative [Leishmania donovani]
Length = 211
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 73/87 (83%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVSH 170
GQE FR++TRSYYRGA+GAL+V DV+
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTR 91
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + +KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|224102877|ref|XP_002312839.1| predicted protein [Populus trichocarpa]
gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa]
gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta CCMP2712]
Length = 207
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY+Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ R+ ++PI K +
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITIDNKPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
W ++GQ S+ I + G G
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAGA 82
>gi|340059728|emb|CCC54123.1| putative ras-related protein rab-2a [Trypanosoma vivax Y486]
Length = 211
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 72/88 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 YNYVFKYIIIGDSGVGKSCLLLQFTDRRFEPLHDLTIGVEFGARVVPIENKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL---L 68
Y+Y+FKYIIIGD GVGKSCLL QFT++++ LT + + + PI KN+ +
Sbjct: 4 YNYVFKYIIIGDSGVGKSCLLLQFTDRRFEPLHDLT---IGVEFGARVVPIENKNVKLQI 60
Query: 69 WALVSKMSSSGQYSYSYIFK 88
W ++GQ S+ I +
Sbjct: 61 W------DTAGQESFRSITR 74
>gi|219123942|ref|XP_002182274.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406235|gb|EEC46175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 210
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE-KIKLQIW 140
SYSY+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I V + ++KLQIW
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISVADDTQVKLQIW 61
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 DTAGQESFRSITRSYYRGAAGALLVYDIT 90
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 15/92 (16%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVC-----LRLVSTSQPITRK 65
SYSY+FKYIIIGD GVGKSCLL QFT++++ Q D R++S + K
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMISVADDTQVK 57
Query: 66 NLLWALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
+W ++GQ S+ I + G G
Sbjct: 58 LQIW------DTAGQESFRSITRSYYRGAAGA 83
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ + S+PI K +
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
W ++GQ S+ I + G G
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAGA 82
>gi|209881440|ref|XP_002142158.1| Rab2 GTPase protein [Cryptosporidium muris RN66]
gi|209557764|gb|EEA07809.1| Rab2 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 214
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 71/87 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYIIIGD VGKSCLL QFT+ +F D TIGVEFG R++ + ++IKLQIWDT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLTIGVEFGARVVNIDSKQIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYYRGAAGAL+V D+S
Sbjct: 65 AGQESFRSITRSYYRGAAGALLVYDIS 91
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FKYIIIGD VGKSCLL QFT+ ++ + LT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLT 40
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ + S+PI K +
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
W ++GQ S+ I + G G
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAGA 82
>gi|225710156|gb|ACO10924.1| Ras-related protein Rab-4B [Caligus rogercresseyi]
Length = 219
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 73/87 (83%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+++IG G GKSCLL QF E +++ C HTIGVEFG++++ V G+ +KLQIWDT
Sbjct: 6 YDYLFKFLVIGSAGTGKSCLLLQFIEGRYLDKCRHTIGVEFGSKVLPVGGKTVKLQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 66 AGQERFRSVTRSYYRGAAGALLVYDIA 92
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y Y+FK+++IG G GKSCLL QF E +Y
Sbjct: 6 YDYLFKFLVIGSAGTGKSCLLLQFIEGRYL 35
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YS++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRG+AGAL+V D++
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITR 89
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
YS++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>gi|328874448|gb|EGG22813.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 210
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YS++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 61
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRG+AGAL+V D++
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITR 89
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
YS++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>gi|224047814|ref|XP_002191089.1| PREDICTED: ras-related protein Rab-4A [Taeniopygia guttata]
Length = 246
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 71/82 (86%)
Query: 88 KYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQER 147
K+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWDTAGQER
Sbjct: 43 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 102
Query: 148 FRAVTRSYYRGAAGALMVIDVS 169
FR+VTRSYYRGAAGAL+V D++
Sbjct: 103 FRSVTRSYYRGAAGALLVYDIT 124
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 17 KYIIIGDMGVGKSCLLHQFTEQKY 40
K+++IG+ G GKSCLLHQF E+K+
Sbjct: 43 KFLVIGNAGTGKSCLLHQFIEKKF 66
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ L S+PI K +
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
W ++GQ S+ I + G G
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAGA 82
>gi|330791931|ref|XP_003284044.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
gi|330827546|ref|XP_003291835.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325077958|gb|EGC31637.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325085973|gb|EGC39370.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
Length = 208
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 71/85 (83%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
Y+FK++I+GD VGKSCLLH+FT+ +F HTIGV+F +RII++ G +KLQIWDTAG
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRFKSQSSHTIGVDFASRIIDIQGRAVKLQIWDTAG 65
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRG++G ++V DVS
Sbjct: 66 QERFRSVTRSYYRGSSGVVLVYDVS 90
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 24/27 (88%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+FK++I+GD VGKSCLLH+FT+ ++
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRF 32
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYI+IGD GVGKSCLL QFT+++F+ T+GVEFG+R+I ++ +KIKLQIWD
Sbjct: 2 AYAYLFKYIVIGDSGVGKSCLLLQFTDKRFLSSHNLTVGVEFGSRMITINDKKIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++ RSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSIARSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y+Y+FKYI+IGD GVGKSCLL QFT++++ LT
Sbjct: 2 AYAYLFKYIVIGDSGVGKSCLLLQFTDKRFLSSHNLT 38
>gi|330841005|ref|XP_003292496.1| Rab GTPase [Dictyostelium purpureum]
gi|325077244|gb|EGC30969.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + ++IKLQIWDT
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKQIKLQIWDT 61
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRG+AGAL+V D++
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITR 89
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>gi|145348347|ref|XP_001418612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578842|gb|ABO96905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 212
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI+IGD GVGKSCLL QFT++ F P TIGVEFG+R++ V +++KLQIWD
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKTFQPVHDLTIGVEFGSRMVSVASKQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAA AL+V DV+
Sbjct: 62 TAGQESFRSITRSYYRGAAAALLVYDVTR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI+IGD GVGKSCLL QFT++ +
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKTF 31
>gi|149212752|gb|ABR22619.1| GTP-binding protein [Lolium temulentum]
Length = 210
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + I+LQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIELQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|308805729|ref|XP_003080176.1| YptC4 (ISS) [Ostreococcus tauri]
gi|116058636|emb|CAL54343.1| YptC4 (ISS) [Ostreococcus tauri]
Length = 215
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+ KYIIIGD GVGKSCLL QFT+Q+F TIGVEFG+R++ G+++KLQIWD
Sbjct: 2 SYAYLLKYIIIGDTGVGKSCLLLQFTDQRFQLVHDLTIGVEFGSRMVTAGGKQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V DV+
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDVTR 90
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY+Y+ KYIIIGD GVGKSCLL QFT+Q++ L LT
Sbjct: 2 SYAYLLKYIIIGDTGVGKSCLLLQFTDQRFQLVHDLT 38
>gi|47217171|emb|CAG11007.1| unnamed protein product [Tetraodon nigroviridis]
Length = 209
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 73/86 (84%)
Query: 84 SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTA 143
++FK+++IG+ G GKSCLLHQF E++F + HTIGVEFG++II V + +KLQIWDTA
Sbjct: 2 DFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIISVVSKMVKLQIWDTA 61
Query: 144 GQERFRAVTRSYYRGAAGALMVIDVS 169
GQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 62 GQERFRSVTRSYYRGAAGALLVYDIT 87
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 24/28 (85%)
Query: 13 SYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 2 DFLFKFLVIGNAGTGKSCLLHQFIEKRF 29
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG R +++ + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQNKNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE F+++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFKSITRSYYRGAAGALLVYDITR 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
SY+Y+FKYIIIGD GVGKSCLL QFT++++ LT + + + + I KN+
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLT---IGVEFGARTVQIQNKNIKLQ 58
Query: 68 LWALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
+W ++GQ S+ I + G G
Sbjct: 59 IW------DTAGQESFKSITRSYYRGAAGA 82
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG R++ + +IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|217075558|gb|ACJ86139.1| unknown [Medicago truncatula]
gi|388494336|gb|AFK35234.1| unknown [Medicago truncatula]
Length = 175
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY--FLGLQLTQDYVCLRLVSTSQPITRKNLL 68
SY Y+FKYIIIGD GVGKSCLL QFT++++ L + ++ L S+PI K +
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPI--KLQI 59
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
W ++GQ S+ I + G G
Sbjct: 60 W------DTAGQESFRSITRSYYRGAAGA 82
>gi|357154071|ref|XP_003576660.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 209
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI++GD GVGKSCL+ QFT+++F P TIGVEFG+R++ + KIKL IWD
Sbjct: 2 SYAYLFKYIVVGDTGVGKSCLMLQFTDKRFQPVHDLTIGVEFGSRMVTIDNRKIKLHIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAA AL+V D++
Sbjct: 62 TAGQEAFRSITRSYYRGAAAALLVYDIT 89
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI++GD GVGKSCL+ QFT++++
Sbjct: 2 SYAYLFKYIVVGDTGVGKSCLMLQFTDKRF 31
>gi|1619857|gb|AAB16974.1| rab14-like, partial [Caenorhabditis elegans]
Length = 69
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 64/68 (94%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAG 144
LQIWDTAG
Sbjct: 62 LQIWDTAG 69
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 TAAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF 36
>gi|195618502|gb|ACG31081.1| ras-related protein Rab-2-A [Zea mays]
Length = 210
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYR AAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRVAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|281205133|gb|EFA79326.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 253
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDT
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKPIKLQIWDT 61
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRG+AGAL+V D++
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITR 89
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG R++ + ++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V DV+
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDVT 89
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|449491237|ref|XP_004158837.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI+IGD GVGKSCLL QFT+ +F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAA AL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAARALLVYDIT 89
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI+IGD GVGKSCLL QFT+ ++
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDNRF 31
>gi|255071631|ref|XP_002499490.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
gi|226514752|gb|ACO60748.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
Length = 220
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG+R++ ++ +IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRMVSINDRQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|393218620|gb|EJD04108.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 248
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH FT+ F P HTIGVEF +R I V +KIKLQ+WD
Sbjct: 17 TYDFLLKFIIIGEAGTGKSCLLHHFTQNCFKPHSQHTIGVEFSSRTINVGDKKIKLQLWD 76
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 77 TAGQERFRSVTRSYYRGAAGAILVYDIT 104
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQ 38
+Y ++ K+IIIG+ G GKSCLLH FT+
Sbjct: 17 TYDFLLKFIIIGEAGTGKSCLLHHFTQN 44
>gi|303272713|ref|XP_003055718.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463692|gb|EEH60970.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD GVGKSCLL QFT+++F TIGVEFG+R++ + ++IKLQIWD
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRLVAIGEKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|6624302|dbj|BAA88497.1| small GTP-binding protein [Carica papaya]
Length = 211
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G IKLQI D
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPIKLQIRD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|145534915|ref|XP_001453196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833742|emb|CAI39341.1| rab_B28 [Paramecium tetraurelia]
gi|124420907|emb|CAK85799.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FK+I+IGD GVGKSCLL QF +++F TIGVEFG R+IE+ G+ IKLQIWD
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGARMIEIDGQNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYR AAGA++V D++
Sbjct: 62 TAGQESFRSITRSYYRSAAGAIIVYDIT 89
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FK+I+IGD GVGKSCLL QF ++++
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRF 31
>gi|13785146|emb|CAA72626.2| rab4A-like protein [Trichinella pseudospiralis]
Length = 213
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+YSY+FKY+IIG+ G GKSC+LHQF E KF D HTIG+EFG++++++ IKLQ+WD
Sbjct: 4 TYSYLFKYLIIGNSGTGKSCVLHQFLENKFKQDTAHTIGIEFGSKVVKIQDRSIKLQVWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR++T++YY GAA AL+V D++
Sbjct: 64 TAGQERFRSLTKNYYNGAACALLVYDIT 91
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+YSY+FKY+IIG+ G GKSC+LHQF E K+
Sbjct: 4 TYSYLFKYLIIGNSGTGKSCVLHQFLENKF 33
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD VGKSCLL QFT+ +F TIGVEFG R++ + G +IKLQIWD
Sbjct: 3 SYSYLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDLTIGVEFGARMVTIDGHQIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVYDITR 91
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD VGKSCLL QFT+ ++
Sbjct: 3 SYSYLFKYIIIGDSAVGKSCLLLQFTDHRF 32
>gi|167378077|ref|XP_001734659.1| GTP-binding protein YPTC4 [Entamoeba dispar SAW760]
gi|165903728|gb|EDR29171.1| GTP-binding protein YPTC4, putative [Entamoeba dispar SAW760]
Length = 213
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Query: 57 STSQPITRKNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCP 116
+T+ P L + S + QY Y +FKY+I+G++ VGKSCLL QF +++F P
Sbjct: 9 NTNTPTENTKTLPVVDSNKPADSQYQY--VFKYVIVGEVAVGKSCLLLQFQDKRFQPIHD 66
Query: 117 HTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TIGVEFGT+ I + G+ +KLQIWDTAG E+FR++TRSYYRGA GAL+V D+S
Sbjct: 67 LTIGVEFGTKTIPIQGQSVKLQIWDTAGSEKFRSITRSYYRGATGALLVYDISR 120
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKY+I+G++ VGKSCLL QF ++++
Sbjct: 33 YQYVFKYVIVGEVAVGKSCLLLQFQDKRF 61
>gi|124784242|gb|ABN14969.1| RAB4B protein [Taenia asiatica]
Length = 201
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+ K++IIGD GK+C+L +F E F D HTIGVEFGT++I++ GE +KLQIWD
Sbjct: 4 SYDYLLKFLIIGDASTGKTCILRRFIEDTFKEDMLHTIGVEFGTKVIQIGGESLKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERF+ VTRSYYRGAAGAL+V D+S
Sbjct: 64 TAGQERFQCVTRSYYRGAAGALVVYDIS 91
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+ K++IIGD GK+C+L +F E +
Sbjct: 4 SYDYLLKFLIIGDASTGKTCILRRFIEDTF 33
>gi|330841763|ref|XP_003292861.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
gi|325076873|gb|EGC30626.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
Length = 206
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 71/85 (83%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
Y+FK++I+GD VGKSCLLH+FT+ +F HTIGV+F ++II++ G +KLQIWDTAG
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRFKSQSSHTIGVDFASKIIDIQGRAVKLQIWDTAG 65
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VTRSYYRG++G ++V DVS
Sbjct: 66 QERFRSVTRSYYRGSSGVVLVYDVS 90
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 24/27 (88%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+FK++I+GD VGKSCLLH+FT+ ++
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRF 32
>gi|440798712|gb|ELR19779.1| Rasrelated protein Rab-2B, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 74/89 (83%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD VGKSC+L QFT+++F TIGVEFG R++++ GE +KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTSVGKSCILLQFTDKRFQSVHDITIGVEFGARVVKIGGEDVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD VGKSC+L QFT++++
Sbjct: 2 SYAYLFKYIIIGDTSVGKSCILLQFTDKRF 31
>gi|145511982|ref|XP_001441913.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834003|emb|CAI43252.1| rab_A28 [Paramecium tetraurelia]
gi|124409174|emb|CAK74516.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FK+I+IGD GVGKSCLL QF +++F TIGVEFG R+IE G+ IKLQIWD
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGARMIEFEGQNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYR AAGA++V D++
Sbjct: 62 TAGQESFRSITRSYYRSAAGAIIVYDIT 89
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FK+I+IGD GVGKSCLL QF ++++
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRF 31
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 72/88 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FKYII+GD VGKSCLL QFT+++F P TIGVEFG+R + + ++KLQIWDT
Sbjct: 19 YKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDLTIGVEFGSRTLTIEDNQVKLQIWDT 78
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE+FR++TRSYYRGAAGAL+V D++
Sbjct: 79 AGQEKFRSITRSYYRGAAGALLVYDITR 106
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKYII+GD VGKSCLL QFT++++
Sbjct: 19 YKYLFKYIIVGDTAVGKSCLLLQFTDKRF 47
>gi|167534607|ref|XP_001748979.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772659|gb|EDQ86309.1| predicted protein [Monosiga brevicollis MX1]
Length = 221
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 10/101 (9%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDC--PHTIGVEFGTRIIEVH---- 131
+G Y+Y+YIFKYIIIGDMGVGKSCLLHQFTEQK PH+ + ++ +
Sbjct: 2 AGAYNYTYIFKYIIIGDMGVGKSCLLHQFTEQKCTRRSLSPHSWLIALTPLVLSLEPASS 61
Query: 132 ----GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDV 168
G+KIKLQIWDTAGQERFRAVTRSYYRGAAGAL+V D+
Sbjct: 62 RHVCGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDI 102
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQK 39
+G Y+Y+YIFKYIIIGDMGVGKSCLLHQFTEQK
Sbjct: 2 AGAYNYTYIFKYIIIGDMGVGKSCLLHQFTEQK 34
>gi|388501410|gb|AFK38771.1| unknown [Medicago truncatula]
Length = 211
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S +Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SCAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR +TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRPITRSYYRGAAGALLVYDITR 90
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S +Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SCAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>gi|357625222|gb|EHJ75731.1| ras-related GTP-binding protein 4b [Danaus plexippus]
Length = 214
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK++IIG G GKS LL+ F KF D HTIGVEFG++II + G+ KLQIWD
Sbjct: 4 SYEYLFKFLIIGSAGTGKSSLLNNFLGNKFKEDRCHTIGVEFGSKIINIGGKSTKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V DV+
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDVT 91
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK++IIG G GKS LL+ F K+
Sbjct: 4 SYEYLFKFLIIGSAGTGKSSLLNNFLGNKF 33
>gi|339235967|ref|XP_003379538.1| GTP-binding protein yptV4 [Trichinella spiralis]
gi|316977780|gb|EFV60837.1| GTP-binding protein yptV4 [Trichinella spiralis]
Length = 375
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FK++IIG+ G GKSC+LHQF E KF D HTIG+EFG++++++ IKLQ+WD
Sbjct: 4 TYNYLFKFLIIGNSGTGKSCVLHQFLENKFKQDTAHTIGIEFGSKVVKIQDRSIKLQVWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR++T++YY GAA AL+V D++
Sbjct: 64 TAGQERFRSLTKNYYNGAACALLVYDIT 91
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FK++IIG+ G GKSC+LHQF E K+
Sbjct: 4 TYNYLFKFLIIGNSGTGKSCVLHQFLENKF 33
>gi|63087689|emb|CAI92126.1| RAB14 protein variant [Mus musculus]
gi|444724049|gb|ELW64671.1| Ras-related protein Rab-14 [Tupaia chinensis]
Length = 197
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 69/94 (73%), Gaps = 18/94 (19%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIII M DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIII------------------VMADCPHTIGVEFGTRIIEVSGQKIK 43
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 44 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 77
>gi|440801985|gb|ELR22925.1| RAB4, putative [Acanthamoeba castellanii str. Neff]
Length = 204
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 69/87 (79%), Gaps = 5/87 (5%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FK+IIIGD GKSCLLH+F + KFM D HTIGVEFG++II + G IKLQIWDT
Sbjct: 5 YNYLFKFIIIGDAATGKSCLLHRFIDNKFMRDSTHTIGVEFGSKIINIQGNNIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQ VTRSYYRGAAGAL+V D++
Sbjct: 65 AGQ-----VTRSYYRGAAGALLVYDIT 86
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+IIIGD GKSCLLH+F + K+
Sbjct: 5 YNYLFKFIIIGDAATGKSCLLHRFIDNKF 33
>gi|340502213|gb|EGR28924.1| hypothetical protein IMG5_166730 [Ichthyophthirius multifiliis]
Length = 218
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSC+L QF E+KF TIGVEFG R++ + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCVLSQFIEKKFKEKHDVTIGVEFGARMLSIDNKNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYR AAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRSAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSC+L QF E+K+
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCVLSQFIEKKF 31
>gi|63087697|emb|CAI92130.1| RAB14 protein variant [Mus musculus]
Length = 197
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 69/94 (73%), Gaps = 18/94 (19%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIII M DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIII------------------VMADCPHTIGVEFGTRIIEVSGQKIK 43
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 44 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 77
>gi|407850451|gb|EKG04844.1| hypothetical protein TCSYLVIO_004099 [Trypanosoma cruzi]
Length = 207
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|387202244|gb|AFJ68941.1| gtp-binding protein gb2, partial [Nannochloropsis gaditana CCMP526]
Length = 206
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FK I+IGD GVGKSCLL QFT+++F+ TIGVEFG R++ + G+ IKLQIWD
Sbjct: 2 SYAYLFKSIVIGDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLVHIDGKAIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FK I+IGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKSIVIGDSGVGKSCLLLQFTDRRF 31
>gi|297835774|ref|XP_002885769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331609|gb|EFH62028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGK+CLL QFT+++F P TIG FG R++ V G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKTCLLLQFTDKRFQPVHDLTIGAGFGDRMVTVDGRSIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRS+YRGAAGAL+V D+S
Sbjct: 62 TAGQETFRSITRSFYRGAAGALLVYDIS 89
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGK+CLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKTCLLLQFTDKRF 31
>gi|253743849|gb|EET00140.1| Rab2a [Giardia intestinalis ATCC 50581]
Length = 214
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI++GD VGKSCLL QFTEQ+F T+GVE+GTR IEV G+KIK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
T GQE FR++TRSYYRG+ AL+V D++
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITR 93
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI++GD VGKSCLL QFTEQ++
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRF 34
>gi|357460067|ref|XP_003600315.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
gi|355489363|gb|AES70566.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
Length = 171
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S SY FKYIIIGD GVGKSCLL QFT+ +F TIGVEFG R I ++ +KLQIWD
Sbjct: 2 SRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR++TRSYYR AAGAL+V D++
Sbjct: 62 TAGQERFRSITRSYYRKAAGALLVYDITR 90
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S SY FKYIIIGD GVGKSCLL QFT+ ++
Sbjct: 2 SRSYAFKYIIIGDTGVGKSCLLLQFTDNRF 31
>gi|308161368|gb|EFO63819.1| Rab2a [Giardia lamblia P15]
Length = 214
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI++GD VGKSCLL QFTEQ+F T+GVE+GTR IEV G+KIK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
T GQE FR++TRSYYRG+ AL+V D++
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITR 93
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI++GD VGKSCLL QFTEQ++
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRF 34
>gi|357514605|ref|XP_003627591.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
gi|355521613|gb|AET02067.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
Length = 189
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S SY FKYIIIGD GVGKSCLL QFT+ +F TIGVEFG R I ++ +KLQIWD
Sbjct: 2 SRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR++TRSYYR AAGAL+V D++
Sbjct: 62 TAGQERFRSITRSYYRKAAGALLVYDITR 90
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S SY FKYIIIGD GVGKSCLL QFT+ ++
Sbjct: 2 SRSYAFKYIIIGDTGVGKSCLLLQFTDNRF 31
>gi|71415329|ref|XP_809735.1| ras-related protein rab-2a [Trypanosoma cruzi strain CL Brener]
gi|70874162|gb|EAN87884.1| ras-related protein rab-2a, putative [Trypanosoma cruzi]
Length = 207
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|159114144|ref|XP_001707297.1| Rab2a [Giardia lamblia ATCC 50803]
gi|10047433|gb|AAG12240.1|AF183937_1 guanine nucleotide-binding protein Rab2 [Giardia intestinalis]
gi|157435401|gb|EDO79623.1| Rab2a [Giardia lamblia ATCC 50803]
Length = 214
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYI++GD VGKSCLL QFTEQ+F T+GVE+GTR IEV G+KIK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
T GQE FR++TRSYYRG+ AL+V D++
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITR 93
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYI++GD VGKSCLL QFTEQ++
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRF 34
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 71/90 (78%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD VGK+ LL +FT +F PD TIGVEF TR +E++G++IK QIW
Sbjct: 10 YDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQER+RA+T +YYRGA GAL+V D+S+
Sbjct: 70 DTAGQERYRAITAAYYRGAVGALVVYDISN 99
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M + Y Y Y+FK ++IGD VGK+ LL +FT ++
Sbjct: 1 MADTADDYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEF 40
>gi|67482983|ref|XP_656786.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474007|gb|EAL51401.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790082|dbj|BAD82837.1| small GTPase EhRab2C [Entamoeba histolytica]
Length = 231
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+ + Y Y+FKY+I+G++ VGKSCLL QF +++F P TIGVEFGT+ I + G+ +
Sbjct: 44 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSV 103
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAG E+FR++TRSYYRGA+GAL+V D+S
Sbjct: 104 KLQIWDTAGSEKFRSITRSYYRGASGALLVYDISR 138
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ + Y Y+FKY+I+G++ VGKSCLL QF ++++
Sbjct: 44 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRF 79
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYII+GD VGKSCLL QFT+++F TIGVEFG+R ++++ + IKLQIWD
Sbjct: 5 SYSYVFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKAIKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRG+ GAL+V DV+
Sbjct: 65 TAGQESFRSITRSYYRGSIGALLVYDVT 92
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYII+GD VGKSCLL QFT++++
Sbjct: 5 SYSYVFKYIIVGDSAVGKSCLLLQFTDKRF 34
>gi|407411083|gb|EKF33291.1| hypothetical protein MOQ_002844 [Trypanosoma cruzi marinkellei]
Length = 207
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|407041380|gb|EKE40700.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449705006|gb|EMD45146.1| GTP-binding protein YPTC4, putative [Entamoeba histolytica KU27]
Length = 212
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+ + Y Y+FKY+I+G++ VGKSCLL QF +++F P TIGVEFGT+ I + G+ +
Sbjct: 25 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSV 84
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAG E+FR++TRSYYRGA+GAL+V D+S
Sbjct: 85 KLQIWDTAGSEKFRSITRSYYRGASGALLVYDISR 119
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ + Y Y+FKY+I+G++ VGKSCLL QF ++++
Sbjct: 25 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRF 60
>gi|114052070|ref|NP_001040209.1| ras-related GTP-binding protein 4b [Bombyx mori]
gi|87248395|gb|ABD36250.1| ras-related GTP-binding protein 4b [Bombyx mori]
Length = 214
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+++IG G GKS LL+ F KF D HTIGVEFG++I+ + G+ KLQIWD
Sbjct: 4 SYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK+++IG G GKS LL+ F K+
Sbjct: 4 SYEYLFKFLVIGSAGTGKSSLLNNFIGNKF 33
>gi|167394434|ref|XP_001740967.1| GTP-binding protein YPTC4 [Entamoeba dispar SAW760]
gi|165894682|gb|EDR22590.1| GTP-binding protein YPTC4, putative [Entamoeba dispar SAW760]
Length = 212
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+ + Y Y+FKY+I+G++ VGKSCLL QF +++F P TIGVEFGT+ I + G+ +
Sbjct: 25 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSV 84
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQIWDTAG E+FR++TRSYYRGA+GAL+V D+S
Sbjct: 85 KLQIWDTAGSEKFRSITRSYYRGASGALLVYDISR 119
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ + Y Y+FKY+I+G++ VGKSCLL QF ++++
Sbjct: 25 NKPAESQYQYVFKYVIVGEVAVGKSCLLLQFQDKRF 60
>gi|38224671|gb|AAR14147.1| Rab2B [Trypanosoma brucei]
Length = 212
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|342186535|emb|CCC96022.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 211
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVPIKQKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL---L 68
+ Y+FKYIIIGD GVGKSCLL QFT++++ LT + + + PI +KN+ +
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLT---IGVEFGARVVPIKQKNVKLQI 60
Query: 69 WALVSKMSSSGQYSYSYIFK 88
W ++GQ S+ I +
Sbjct: 61 W------DTAGQESFRSITR 74
>gi|74026032|ref|XP_829582.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834968|gb|EAN80470.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 212
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|261335598|emb|CBH18592.1| ras-related protein rab-2a, putative [Trypanosoma brucei gambiense
DAL972]
Length = 212
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTR 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|409051612|gb|EKM61088.1| hypothetical protein PHACADRAFT_82471 [Phanerochaete carnosa
HHB-10118-sp]
Length = 239
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLHQFT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 15 TYDFLMKYIIIGEAGTGKSCLLHQFTHNSFKEHSQHTIGVEFSSRTVKLGEKRIKLQLWD 74
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 75 TAGQERFRSVTRSYYRGAAGAILVYDIT 102
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLHQFT +
Sbjct: 15 TYDFLMKYIIIGEAGTGKSCLLHQFTHNSF 44
>gi|403362162|gb|EJY80798.1| Rab GTPase 2d [Oxytricha trifallax]
Length = 230
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+YSY+FK+I++GD VGKSCLL QFT+++F TIGVEFG+R ++V+ + +KLQIWD
Sbjct: 6 TYSYVFKFIVVGDSSVGKSCLLLQFTDKRFKATHDLTIGVEFGSRTVQVNNQNVKLQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRG+ GAL+V D++
Sbjct: 66 TAGQESFRSITRSYYRGSIGALLVYDIT 93
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
+YSY+FK+I++GD VGKSCLL QFT++++ LT + + S + + +N+
Sbjct: 6 TYSYVFKFIVVGDSSVGKSCLLLQFTDKRFKATHDLT---IGVEFGSRTVQVNNQNVKLQ 62
Query: 68 LWALVSKMSSSGQYSYSYIFKYIIIGDMGV 97
+W ++GQ S+ I + G +G
Sbjct: 63 IW------DTAGQESFRSITRSYYRGSIGA 86
>gi|67466375|ref|XP_649335.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465749|gb|EAL43948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790080|dbj|BAD82836.1| small GTPase EhRab2B [Entamoeba histolytica]
gi|449708159|gb|EMD47674.1| small GTPase EhRab2B, putative [Entamoeba histolytica KU27]
Length = 213
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 17/124 (13%)
Query: 47 TQDYVCLRLVSTSQPITRKNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQF 106
T++ L +V +++P+ + Y Y+FKY+I+G++ VGKSCLL QF
Sbjct: 14 TENITTLPIVDSNKPVDSQ-----------------YQYVFKYVIVGEVAVGKSCLLLQF 56
Query: 107 TEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVI 166
+++F P TIGVEFGT+ I + G+ +KLQIWDTAG E+FR++TRSYYRGA GAL+V
Sbjct: 57 QDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDTAGSEKFRSITRSYYRGATGALLVY 116
Query: 167 DVSH 170
D+S
Sbjct: 117 DISR 120
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FKY+I+G++ VGKSCLL QF ++++
Sbjct: 33 YQYVFKYVIVGEVAVGKSCLLLQFQDKRF 61
>gi|256081157|ref|XP_002576839.1| rab-2414 [Schistosoma mansoni]
gi|353232500|emb|CCD79855.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 223
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GK+C+L ++TE KF+P+ PHTIG EFG++II V G +K+QIWD
Sbjct: 6 NYKYLFKFLIIGASGSGKTCILRRYTEGKFIPNMPHTIGAEFGSKIINVDGTTVKIQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+V RSYY A GAL+V D++
Sbjct: 66 TAGQERFRSVARSYYHDAVGALLVYDIT 93
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y Y+FK++IIG G GK+C+L ++TE K+ + T
Sbjct: 6 NYKYLFKFLIIGASGSGKTCILRRYTEGKFIPNMPHT 42
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y Y+FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKST 45
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNI 40
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+K+K QIW
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIW 68
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALIVYDIS 97
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y Y+FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKST 46
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNI 40
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNM 40
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNI 40
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 69/88 (78%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F PD TIGVEF TR +EV G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIS 93
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGKS LL +FT ++
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEF 35
>gi|392571435|gb|EIW64607.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 242
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GK+CLLHQFT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKTCLLHQFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDIT 103
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GK+CLLHQFT +
Sbjct: 16 TYDFLMKYIIIGEAGTGKTCLLHQFTHNSF 45
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+K+K QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y Y+FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKST 45
>gi|170083919|ref|XP_001873183.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650735|gb|EDR14975.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAGA++V D+++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDITN 104
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLH FT +
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSF 45
>gi|307777816|dbj|BAJ21304.1| Rab-family small GTPase Rab2E [Tetrahymena thermophila]
Length = 234
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 70/87 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+IIIG+ VGKSC+L QFTE +F + TIGVEFG++ IEV G IK+QIWDT
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRFKREHDATIGVEFGSKNIEVDGYTIKIQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYYRG+ GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGSVGALLVYDVT 90
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK+IIIG+ VGKSC+L QFTE ++
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRF 32
>gi|145496190|ref|XP_001434086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831499|emb|CAI39317.1| rab_C12 [Paramecium tetraurelia]
gi|124401209|emb|CAK66689.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 72/88 (81%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FK+I+IGD GVGKSCLL QF +++F TIGVEFG ++IE+ G IKLQIWD
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGAKLIELDGLNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYR AAGA++V D++
Sbjct: 62 TAGQESFRSITRSYYRSAAGAIVVYDIT 89
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FK+I+IGD GVGKSCLL QF ++++
Sbjct: 2 SYSYLFKFILIGDTGVGKSCLLLQFIDKRF 31
>gi|71653649|ref|XP_815459.1| ras-related protein rab-2a [Trypanosoma cruzi strain CL Brener]
gi|70880514|gb|EAN93608.1| ras-related protein rab-2a, putative [Trypanosoma cruzi]
Length = 92
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 71/87 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYYRGA GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVT 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRF 32
>gi|409083547|gb|EKM83904.1| hypothetical protein AGABI1DRAFT_66969 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 243
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDIT 103
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLH FT +
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSF 45
>gi|440290344|gb|ELP83770.1| GTP-binding protein YPTC4, putative [Entamoeba invadens IP1]
Length = 211
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%), Gaps = 3/120 (2%)
Query: 51 VCLRLVSTSQPITRKNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQK 110
C + S P ++ + +K S + Y+FK++++G++ VGKSCLL QF +++
Sbjct: 2 ACCGNDTKSAPTNGPKVIPVVDTKAPES---QFQYVFKFVVVGEVAVGKSCLLLQFQDKR 58
Query: 111 FMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
F P TIGVEFGT+ + + G+ +KLQIWDTAG E+FR++TRSYYRGAAGAL+V D+S
Sbjct: 59 FQPIHDLTIGVEFGTKTVPIQGQSVKLQIWDTAGSEKFRSITRSYYRGAAGALLVYDISR 118
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 28/36 (77%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ + + + Y+FK++++G++ VGKSCLL QF ++++
Sbjct: 24 TKAPESQFQYVFKFVVVGEVAVGKSCLLLQFQDKRF 59
>gi|426201412|gb|EKV51335.1| hypothetical protein AGABI2DRAFT_197272 [Agaricus bisporus var.
bisporus H97]
Length = 243
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDIT 103
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLH FT +
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSF 45
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNL 40
>gi|375153504|gb|AFA36651.1| small GTPase Rab4b [Helicoverpa armigera]
Length = 214
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK++++G G GKS LL+ F KF D HTIGVEFG++I+ + G+ KLQ+WD
Sbjct: 4 SYEYLFKFLVVGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQMWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FK++++G G GKS LL+ F K+
Sbjct: 4 SYEYLFKFLVVGSAGTGKSSLLNNFIGNKF 33
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT F + TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT + +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNM 40
>gi|146182702|ref|XP_001025075.2| Ras family protein [Tetrahymena thermophila]
gi|146143741|gb|EAS04830.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777762|dbj|BAJ21277.1| Rab-family small GTPase Rab2A [Tetrahymena thermophila]
Length = 211
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSC+L QF +++F TIGVEFG R+I + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYR AAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRSAAGALLVYDIT 89
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSC+L QF ++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCILSQFIDKRF 31
>gi|242021638|ref|XP_002431251.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516505|gb|EEB18513.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 211
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 70/85 (82%)
Query: 85 YIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAG 144
Y+FK+++IG G GKSCLL+QF +F D +TIGVEFG++I+ V G+ +KLQIWDTAG
Sbjct: 5 YLFKFLVIGSAGCGKSCLLYQFIRNQFKEDSSYTIGVEFGSKIVNVGGKSVKLQIWDTAG 64
Query: 145 QERFRAVTRSYYRGAAGALMVIDVS 169
QERFR+VT+ YYRGAAGAL+V D++
Sbjct: 65 QERFRSVTKGYYRGAAGALLVYDIT 89
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 14 YIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+FK+++IG G GKSCLL+QF ++
Sbjct: 5 YLFKFLVIGSAGCGKSCLLYQFIRNQF 31
>gi|63087693|emb|CAI92128.1| RAB14 protein variant [Mus musculus]
Length = 197
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 68/94 (72%), Gaps = 18/94 (19%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIII M DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIII------------------VMADCPHTIGVEFGTRIIEVSGQKIK 43
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQ RFRAVTRSYYRGAAGALMV D++
Sbjct: 44 LQIWDTAGQGRFRAVTRSYYRGAAGALMVYDITR 77
>gi|343428423|emb|CBQ71953.1| probable GTP-binding protein rab-4b [Sporisorium reilianum SRZ2]
Length = 246
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH F +F HTIGVEF +R+I++ + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDIT 99
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH F ++
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQF 41
>gi|71006432|ref|XP_757882.1| hypothetical protein UM01735.1 [Ustilago maydis 521]
gi|46097318|gb|EAK82551.1| hypothetical protein UM01735.1 [Ustilago maydis 521]
Length = 246
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH F +F HTIGVEF +R+I++ + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKEQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDIT 99
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH F ++
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQF 41
>gi|443899364|dbj|GAC76695.1| GTPase Rab4 [Pseudozyma antarctica T-34]
Length = 246
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH F +F HTIGVEF +R+I++ + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDIT 99
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH F ++
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQF 41
>gi|395334378|gb|EJF66754.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 242
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GK+CLLHQFT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKFIIIGEAGTGKTCLLHQFTHNSFKEHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDIT 103
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GK+CLLHQFT +
Sbjct: 16 TYDFLMKFIIIGEAGTGKTCLLHQFTHNSF 45
>gi|449551110|gb|EMD42074.1| hypothetical protein CERSUDRAFT_110626 [Ceriporiopsis subvermispora
B]
Length = 240
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYI+IG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 15 TYDFLMKYIVIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 74
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 75 TAGQERFRSVTRSYYRGAAGAILVYDIT 102
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYI+IG+ G GKSCLLH FT +
Sbjct: 15 TYDFLMKYIVIGEAGTGKSCLLHHFTHNSF 44
>gi|389742344|gb|EIM83531.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 246
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKFIIIGEAGTGKSCLLHHFTHNTFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAGA++V D+++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDITN 104
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH FT +
Sbjct: 16 TYDFLMKFIIIGEAGTGKSCLLHHFTHNTF 45
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IE+ G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y Y+FK ++IGD GVGKS LL +FT ++
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEF 38
>gi|426236109|ref|XP_004012017.1| PREDICTED: ras-related protein Rab-2A [Ovis aries]
Length = 219
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 73/87 (83%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+S++ KYI++ + GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWDT
Sbjct: 10 FSFLLKYIVLIEKGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 69
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 70 AGQESFRSITRSYYRGAAGALLVYDIT 96
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+S++ KYI++ + GVGKSCLL QFT++++
Sbjct: 10 FSFLLKYIVLIEKGVGKSCLLLQFTDKRF 38
>gi|145528187|ref|XP_001449893.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833699|emb|CAI39327.1| rab_B60 [Paramecium tetraurelia]
gi|124417482|emb|CAK82496.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+IIIGD VGKSC+L+QF EQKF T+GVEFG +++++ G++IKLQIWD
Sbjct: 2 SYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMTVGVEFGAKVLDLDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE F+++TR YYR AAGA++V DV+
Sbjct: 62 TAGQETFKSITRQYYRSAAGAILVYDVTR 90
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY Y+FK+IIIGD VGKSC+L+QF EQK+ + ++T
Sbjct: 2 SYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMT 38
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 68/91 (74%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT+ F D TIGVEF TR IEV G+ IK Q
Sbjct: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVT 101
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
G Y Y+FK ++IGD GVGKS LL +FT+ + L + T
Sbjct: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKST 50
>gi|302681681|ref|XP_003030522.1| hypothetical protein SCHCODRAFT_16443 [Schizophyllum commune H4-8]
gi|300104213|gb|EFI95619.1| hypothetical protein SCHCODRAFT_16443 [Schizophyllum commune H4-8]
Length = 246
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLHQFT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHQFTHNSFKEHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAA A++V D+++
Sbjct: 76 TAGQERFRSVTRSYYRGAACAILVYDITN 104
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLHQFT +
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHQFTHNSF 45
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHL 40
>gi|399217489|emb|CCF74376.1| unnamed protein product [Babesia microti strain RI]
Length = 386
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 7/94 (7%)
Query: 82 SYSYIFKYIIIGD-------MGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
+Y Y+ K+IIIGD +GVGKSCLL QFT+++F + TIGVEFG RII + G
Sbjct: 163 AYKYLLKFIIIGDTGNETIDLGVGKSCLLLQFTDKRFRANHDLTIGVEFGARIISIQGTP 222
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDV 168
IKLQIWDTAGQE FR++TRSYYRGAAGAL+V D+
Sbjct: 223 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDI 256
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 7/44 (15%)
Query: 11 SYSYIFKYIIIGD-------MGVGKSCLLHQFTEQKYFLGLQLT 47
+Y Y+ K+IIIGD +GVGKSCLL QFT++++ LT
Sbjct: 163 AYKYLLKFIIIGDTGNETIDLGVGKSCLLLQFTDKRFRANHDLT 206
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 67/89 (75%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL-- 67
Y Y Y+FK ++IGD GVGKS LL +FT + L + T + + + + + K +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKST---IGVEFATRTIEVENKKIKA 64
Query: 68 -LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
+W ++GQ Y I G +G + +++ ++Q +C H
Sbjct: 65 QIW------DTAGQERYRAITSAYYRGAVG---ALIVYDISKQSSYENCNH 106
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ SY Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR ++V G+
Sbjct: 1 MAGEAAVSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 95
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
M+ SY Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 1 MAGEAAVSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 44
>gi|328869838|gb|EGG18213.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 200
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YS++FKYI++GD VGKS LL QF +++F P+ TIGVEFG+R I + ++KLQIWDT
Sbjct: 23 YSHLFKYIMVGDSAVGKSNLLLQFVDKRFSPNSDFTIGVEFGSRSINIDNNQVKLQIWDT 82
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE+FR++TR+YYRGA GAL+V D++
Sbjct: 83 AGQEKFRSITRAYYRGAVGALIVYDITR 110
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T S YS++FKYI++GD VGKS LL QF ++++
Sbjct: 14 TFSDRKANPYSHLFKYIMVGDSAVGKSNLLLQFVDKRF 51
>gi|145493804|ref|XP_001432897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833755|emb|CAI39347.1| rab_B12 [Paramecium tetraurelia]
gi|124400012|emb|CAK65500.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y+Y+FKYI++GD VGKSCLL QFTE KF T+GVEFG + I+++ ++IKLQIWD
Sbjct: 4 DYNYMFKYIVVGDTNVGKSCLLLQFTENKFCDHTESTVGVEFGYKTIKINDQQIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQ+ F+++TRSYYRGA G L+V D S
Sbjct: 64 TAGQDSFKSITRSYYRGAIGGLLVFDFSR 92
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FKYI++GD VGKSCLL QFTE K+
Sbjct: 4 DYNYMFKYIVVGDTNVGKSCLLLQFTENKF 33
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNI 40
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNI 40
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNI 40
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR IEV G+KIK QIW
Sbjct: 8 YDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYR A GAL+V D++
Sbjct: 68 DTAGQERYRAITTAYYRAAVGALIVYDIT 96
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 8 YDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTT 45
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F D TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D+S +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTE 101
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y Y++K ++IGD GVGKS LL +FT ++ L + T
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRST 47
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNI 40
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y Y+FK ++IGD GVGKS LL +FT ++
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEF 38
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 9 YDYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIW 68
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIS 97
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 9 YDYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 41
>gi|157873719|ref|XP_001685364.1| putative ras-related rab-4 [Leishmania major strain Friedlin]
gi|68128436|emb|CAJ08532.1| putative ras-related rab-4 [Leishmania major strain Friedlin]
Length = 203
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I+IGD GVGKSCLLH+F E F + TIG+E+G +II+V G K+KLQIWDT
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIEDTFSEEQTQTIGIEYGAKIIDVGGAKVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQER+++VTRSYYRGA G L+V DV++
Sbjct: 65 AGQERYKSVTRSYYRGATGCLIVYDVNN 92
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y + K I+IGD GVGKSCLLH+F E +
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIEDTF 33
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 67/89 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK +++GD GVGKS LL +FT F D TIGVEF TR I+V G+ IK QIWDT
Sbjct: 16 YDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDT 75
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSHV 171
AGQER+RA+T +YYRGAAGAL+V DV+
Sbjct: 76 AGQERYRAITSAYYRGAAGALLVYDVTRA 104
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FK +++GD GVGKS LL +FT + L + T
Sbjct: 16 YDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKST 51
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL-- 67
Y Y Y+FK ++IGD GVGKS LL +FT ++ + + T + + + + + K +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKST---IGVEFATRTIEVENKKIKA 64
Query: 68 -LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
+W ++GQ Y I G +G + +++ ++ +C H
Sbjct: 65 QIW------DTAGQERYRAITSAYYRGAVG---ALIVYDISKSSSYENCNH 106
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ G+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR +EV G
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRM 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ G+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|388852994|emb|CCF53442.1| probable GTP-binding protein [Ustilago hordei]
Length = 246
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH F +F HTIGVEF +R+I++ + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAA AL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAAALLVYDIT 99
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH F ++
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQF 41
>gi|5738168|gb|AAD50281.1|AF169951_1 putative intermediate compartment protein [Tetrahymena thermophila]
Length = 211
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSC+L QF +++F TIGVEFG R+I + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE F+++TRSYY+ AAGAL+V D++
Sbjct: 62 TAGQESFKSITRSYYKSAAGALLVYDIT 89
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSC+L QF ++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCILSQFIDKRF 31
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
Query: 75 MSSSGQ---YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
MS+S + Y Y Y+FK +++G+ VGKS LL +FT +F + TIGVEF TR IEV
Sbjct: 1 MSNSAEDYSYDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVD 60
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
G++IK QIWDTAGQER+RAVT +YYRGA GAL+V D+S+
Sbjct: 61 GKRIKAQIWDTAGQERYRAVTAAYYRGAVGALLVYDISN 99
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 4 MSSSGQ---YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
MS+S + Y Y Y+FK +++G+ VGKS LL +FT ++ + + T
Sbjct: 1 MSNSAEDYSYDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTT 47
>gi|146096271|ref|XP_001467752.1| putative ras-related rab-4 [Leishmania infantum JPCM5]
gi|398020614|ref|XP_003863470.1| ras-related rab-4, putative [Leishmania donovani]
gi|134072118|emb|CAM70817.1| putative ras-related rab-4 [Leishmania infantum JPCM5]
gi|322501703|emb|CBZ36784.1| ras-related rab-4, putative [Leishmania donovani]
Length = 203
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I+IGD GVGKSCLLH+F E F + TIG+E+G +II++ G KIKLQIWDT
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIEDTFSEEQTQTIGIEYGAKIIDLGGAKIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQER+++VTRSYYRGA G L+V DV++
Sbjct: 65 AGQERYKSVTRSYYRGATGCLIVYDVNN 92
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y + K I+IGD GVGKSCLLH+F E +
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIEDTF 33
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 67/89 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK +++GD GVGKS LL +FT F D TIGVEF TR I+V G+ IK QIWDT
Sbjct: 16 YDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDT 75
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSHV 171
AGQER+RA+T +YYRGAAGAL+V DV+
Sbjct: 76 AGQERYRAITSAYYRGAAGALLVYDVTRA 104
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FK +++GD GVGKS LL +FT + L + T
Sbjct: 16 YDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKST 51
>gi|358338265|dbj|GAA56598.1| probable Ras-related protein Rab-4A [Clonorchis sinensis]
Length = 223
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 72/88 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+SY+FK++IIG G GK+C+L ++TE+KF+ + PHTIG EFG++II V G +K+QIWDT
Sbjct: 7 FSYLFKFLIIGTAGAGKTCILRRYTERKFIGNMPHTIGAEFGSKIISVDGTAVKIQIWDT 66
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR++ RSYY A GAL+V D+++
Sbjct: 67 AGQERFRSMARSYYHDAVGALLVYDITN 94
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+SY+FK++IIG G GK+C+L ++TE+K+
Sbjct: 7 FSYLFKFLIIGTAGAGKTCILRRYTERKF 35
>gi|401426815|ref|XP_003877891.1| putative ras-related rab-4 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494138|emb|CBZ29435.1| putative ras-related rab-4 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 203
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 69/88 (78%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I+IGD GVGKSCLLH+F E F + TIG+E+G +II++ G K+KLQIWDT
Sbjct: 5 YQQLLKLIVIGDSGVGKSCLLHRFIEDTFSDEQTQTIGIEYGAKIIDLGGAKVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQER+++VTRSYYRGA G L+V DV++
Sbjct: 65 AGQERYKSVTRSYYRGATGCLIVYDVNN 92
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y + K I+IGD GVGKSCLLH+F E +
Sbjct: 5 YQQLLKLIVIGDSGVGKSCLLHRFIEDTF 33
>gi|29336944|sp|Q9GP33.1|RAB4A_ECHMU RecName: Full=Probable Ras-related protein Rab-4A
gi|11602725|emb|CAC18549.1| putative ras-related protein RAB4A [Echinococcus multilocularis]
Length = 223
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 70/88 (79%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FK++IIG+ G GK+C+L ++TE+KF P+ HTIG EFG+R+I V G +K+QIWDT
Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR++ RSYY A G L+V D+++
Sbjct: 66 AGQERFRSMARSYYHDAVGTLLVYDITN 93
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+ Y+FK++IIG+ G GK+C+L ++TE+K+F Q T
Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHT 41
>gi|390604393|gb|EIN13784.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 244
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH FT F HTIGVEF +R +++ ++IKLQ+WD
Sbjct: 16 TYDFLMKFIIIGEAGSGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTLKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDIT 103
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH FT +
Sbjct: 16 TYDFLMKFIIIGEAGSGKSCLLHHFTHNSF 45
>gi|56753091|gb|AAW24755.1| SJCHGC06903 protein [Schistosoma japonicum]
Length = 223
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK++IIG G GK+C+L ++TE KF+ + PHTIG EFG++II V G +K+QIWD
Sbjct: 6 NYKYLFKFLIIGAAGSGKTCILRRYTEGKFIHNMPHTIGAEFGSKIINVDGTTVKIQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR++ RSYY A GAL+V DV++
Sbjct: 66 TAGQERFRSMARSYYHDAVGALLVYDVTN 94
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y Y+FK++IIG G GK+C+L ++TE K+ + T
Sbjct: 6 NYKYLFKFLIIGAAGSGKTCILRRYTEGKFIHNMPHT 42
>gi|145477051|ref|XP_001424548.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833831|emb|CAI39371.1| rab_A12 [Paramecium tetraurelia]
gi|124391613|emb|CAK57150.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y+Y+FK+I++GD VGKSCLL QFTE KF T+GVEFG + I+++ + IKLQIWD
Sbjct: 4 DYNYMFKFIVVGDTNVGKSCLLLQFTENKFCDHTESTVGVEFGYKTIKLNDQSIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQ+ F+++TRSYYRGA G L+V D S
Sbjct: 64 TAGQDSFKSITRSYYRGAIGGLLVFDFSR 92
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+I++GD VGKSCLL QFTE K+
Sbjct: 4 DYNYMFKFIVVGDTNVGKSCLLLQFTENKF 33
>gi|327269715|ref|XP_003219638.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 316
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 72/85 (84%)
Query: 86 IFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQ 145
++KY+++G +GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWDTAGQ
Sbjct: 110 LWKYVLMGVLGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 169
Query: 146 ERFRAVTRSYYRGAAGALMVIDVSH 170
E FR++TRSYYRGAAGAL+V D++
Sbjct: 170 ESFRSITRSYYRGAAGALLVYDITR 194
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 24/26 (92%)
Query: 15 IFKYIIIGDMGVGKSCLLHQFTEQKY 40
++KY+++G +GVGKSCLL QFT++++
Sbjct: 110 LWKYVLMGVLGVGKSCLLLQFTDKRF 135
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FKYI++GD VGKS LL QF +++F P+ TIGVEFG+R I ++ ++IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE+FR++TR+YYRGA A++V D++
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITR 108
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T + SY ++FKYI++GD VGKS LL QF ++++
Sbjct: 12 TFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRF 49
>gi|392597431|gb|EIW86753.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 243
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ KYIIIG+ G GKSCLLH F F HTIGVEF +R I++ ++IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGSGKSCLLHHFIHNAFKDHSQHTIGVEFSSRTIKLGEKRIKLQLWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAG ++V D+++
Sbjct: 76 TAGQERFRSVTRSYYRGAAGVILVYDITN 104
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLH F +
Sbjct: 16 TYDFLMKYIIIGEAGSGKSCLLHHFIHNAF 45
>gi|58268126|ref|XP_571219.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112017|ref|XP_775544.1| hypothetical protein CNBE2580 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258203|gb|EAL20897.1| hypothetical protein CNBE2580 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227453|gb|AAW43912.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 240
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 71/88 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK+I+IG+ G GKSCLL+Q ++F + HTIGVEF ++ + + + IKLQ+WD
Sbjct: 11 AYDYLFKFIVIGEAGTGKSCLLYQCIHEQFKENSSHTIGVEFSSKTLRIGDKNIKLQLWD 70
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 71 TAGQERFRSVTRSYYRGAAGAILVYDIT 98
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 27/141 (19%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
+Y Y+FK+I+IG+ G GKSCLL+Q +++ + + + + S + I KN+
Sbjct: 11 AYDYLFKFIVIGEAGTGKSCLLYQCIHEQF---KENSSHTIGVEFSSKTLRIGDKNIKLQ 67
Query: 68 LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQ-------KFMPDC----- 115
LW ++GQ + + + G G + L++ T + +++ DC
Sbjct: 68 LW------DTAGQERFRSVTRSYYRGAAG---AILVYDITSRQSFVNLSRWLTDCRALAS 118
Query: 116 PHTIGVEFGTRIIEVHGEKIK 136
PH + V G ++ + +++
Sbjct: 119 PHLVVVLVGNKLDKEEDREVE 139
>gi|146181225|ref|XP_001022351.2| Ras family protein [Tetrahymena thermophila]
gi|146144246|gb|EAS02106.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777818|dbj|BAJ21305.1| Rab-family small GTPase Rab2F [Tetrahymena thermophila]
Length = 235
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 70/87 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+I+IGD GVGKSC+L +F + +F D TIGVEFG++II+V IK+QIWDT
Sbjct: 4 YDYLFKFIMIGDTGVGKSCMLLRFVDDRFREDYDATIGVEFGSKIIDVANLAIKIQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYY+GA GA++V D++
Sbjct: 64 AGQESFRSITRSYYKGAIGAVVVFDIT 90
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK+I+IGD GVGKSC+L +F + ++
Sbjct: 4 YDYLFKFIMIGDTGVGKSCMLLRFVDDRF 32
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 71/89 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SYSY+FKYIIIGD VGKS +L QF E KF + TIGVEFG++II+V G+ +KLQ+WD
Sbjct: 2 SYSYLFKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE F+++TRSYYRG+ A +V DV++
Sbjct: 62 TAGQESFKSITRSYYRGSICAFLVYDVTN 90
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SYSY+FKYIIIGD VGKS +L QF E K+
Sbjct: 2 SYSYLFKYIIIGDSSVGKSAILLQFMEGKF 31
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+SS + Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + V G+ I
Sbjct: 3 TSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVI 62
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+SS + Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 3 TSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D+S +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKAE 101
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D+S +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTE 101
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V G+ IK QIWD
Sbjct: 6 SYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIS 93
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY ++FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 6 SYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKST 42
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 74/101 (73%)
Query: 72 VSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
+S+ + Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+
Sbjct: 1 MSENTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
G+++K QIWDTAGQER+RA+T +YYRGA GAL+V D+S +
Sbjct: 61 GKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTE 101
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|393240634|gb|EJD48159.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 240
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+I+IG+ G GKSCLLH F F HTIGVEF +R I++ ++IKLQ+WD
Sbjct: 14 AYDFLLKFIVIGEAGTGKSCLLHYFLHSSFKGPSQHTIGVEFSSRTIKLGEKRIKLQLWD 73
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAAGAL+V D+++
Sbjct: 74 TAGQERFRSVTRSYYRGAAGALLVYDITN 102
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+I+IG+ G GKSCLLH F +
Sbjct: 14 AYDFLLKFIVIGEAGTGKSCLLHYFLHSSF 43
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 42
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 68/93 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT+ F D TIGVEF TR I+V + IK Q
Sbjct: 11 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IWDTAGQER+RA+T +YYRGA GAL+V DV+ V
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKV 103
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
G Y Y+FK ++IGD GVGKS LL +FT+ + L + T
Sbjct: 11 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKST 50
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 67/89 (75%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 5 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 64
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAG ER+RA+T +YYRGA GAL+V D+S
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALIVYDIS 93
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y Y+FK ++IGD GVGKS LL +FT ++
Sbjct: 5 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEF 35
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|224587158|gb|ACN58615.1| Ras-related protein Rab-14 [Salmo salar]
Length = 182
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 57/61 (93%)
Query: 110 KFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
KFM DCPHTIGVEFGTRIIEV G+KIKLQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 1 KFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDIT 60
Query: 170 H 170
Sbjct: 61 R 61
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M S Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 66/89 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK +++GD GVGKS LL +FT F D TIGVEF TR I+V G+ IK QIWD
Sbjct: 16 DYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQER+RAVT +YYRGA GAL+V DV+
Sbjct: 76 TAGQERYRAVTSAYYRGAVGALLVYDVTK 104
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK +++GD GVGKS LL +FT + L
Sbjct: 16 DYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSL 47
>gi|145519353|ref|XP_001445543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833776|emb|CAI39354.1| rab_A60 [Paramecium tetraurelia]
gi|124412998|emb|CAK78146.1| unnamed protein product [Paramecium tetraurelia]
Length = 203
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+IIIGD VGKSC+L+QF EQKF T+GVEFG +I+ + ++IKLQIWD
Sbjct: 2 SYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMTVGVEFGAKILNLENKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE F+++TR YYR AAG ++V D++
Sbjct: 62 TAGQETFKSITRQYYRSAAGGILVYDITR 90
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY Y+FK+IIIGD VGKSC+L+QF EQK+ + ++T
Sbjct: 2 SYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMT 38
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ G+ Y Y+FK ++IGD GVGKS L +FT +F + TIGVEF TR +EV G
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRM 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ G+ Y Y+FK ++IGD GVGKS L +FT ++ L
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCL 39
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK ++IGD GVGKS +L +FT +F D TIGVEF TR +EV + IK QIWD
Sbjct: 7 SYDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIS 94
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
SY Y+FK ++IGD GVGKS +L +FT ++ + + T
Sbjct: 7 SYDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKST 43
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G ++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D+S +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTE 101
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|307777766|dbj|BAJ21279.1| Rab-family small GTPase Rab2C [Tetrahymena thermophila]
Length = 223
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+I+IGD GVGKSCL+ QFTE + TIGVEFG +I+++ G+ IKLQIWD
Sbjct: 3 SYYYLFKFIVIGDSGVGKSCLVLQFTENYIRKNHDVTIGVEFGVKIVQIDGKNIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TR+YYR A GA++V D+S
Sbjct: 63 TAGQENFRSLTRAYYRTAIGAIVVYDISR 91
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQ 38
SY Y+FK+I+IGD GVGKSCL+ QFTE
Sbjct: 3 SYYYLFKFIVIGDSGVGKSCLVLQFTEN 30
>gi|15235980|ref|NP_193449.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
gi|75318151|sp|O23561.1|RAB1A_ARATH RecName: Full=Ras-related protein RABB1a; Short=AtRABB1a; AltName:
Full=Ras-related protein Rab2B; Short=AtRab2B
gi|2245075|emb|CAB10497.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268467|emb|CAB80987.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|67633750|gb|AAY78799.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332658456|gb|AEE83856.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
Length = 205
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y FKYIIIGD GVGKSCLL +FT+++F TIGVEFG + I + + IKLQIWD
Sbjct: 2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR+VTRSYYRG AG L+V D++
Sbjct: 62 TAGQESFRSVTRSYYRGRAGTLLVYDITR 90
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y FKYIIIGD GVGKSCLL +FT++++
Sbjct: 2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRF 31
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 69/92 (75%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S + Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK
Sbjct: 2 SSEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S + Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SSEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G +K Q
Sbjct: 8 GEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 67
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 68 IWDTAGQERYRAITSAYYRGALGALLVYDVT 98
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M + G+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MSSRRRVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 42
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 71/97 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+S+ +Y Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++I
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 67
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 68 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 104
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T +S+ +Y Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 6 TTASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 43
>gi|357514597|ref|XP_003627587.1| Ras-related protein Rab-2-A [Medicago truncatula]
gi|355521609|gb|AET02063.1| Ras-related protein Rab-2-A [Medicago truncatula]
Length = 198
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S SY FKYIIIGD+GVGKSCLL QFT+ +F TIGVEFG R I ++ +KLQIWD
Sbjct: 2 SRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERF ++T+SYYR AA AL+V D++
Sbjct: 62 TAGQERFSSITKSYYRKAADALLVYDITR 90
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S SY FKYIIIGD+GVGKSCLL QFT+ ++
Sbjct: 2 SRSYAFKYIIIGDIGVGKSCLLLQFTDNRF 31
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V +KIK QIW
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIW 68
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALIVYDIS 97
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL-- 67
Y Y Y+FK ++IGD GVGKS LL +FT ++ L + T + + + + + K +
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKST---IGVEFATRTIKVEDKKIKA 65
Query: 68 -LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTR 126
+W ++GQ Y I G +G + +++ ++ +C H + T
Sbjct: 66 QIW------DTAGQERYRAITSAYYRGAVG---ALIVYDISKSGTYENCNHWL-----TE 111
Query: 127 IIEVHGEKIKLQ-IWDTAGQERFRAVTRSYYRGAA 160
+ E + + + I + + E RAV RG A
Sbjct: 112 LKENADDNVAIGLIGNKSDLEHLRAVPTEEARGFA 146
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 95
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD+GVGKS LL +FT +F + TIGVEF TR +E+ G ++K QIW
Sbjct: 10 YDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDV 168
DTAGQER+RA+T +YYRGA GAL+V D+
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDI 97
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD+GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNL 42
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 72/87 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FK+II+GD VGKSCLL QFT+ +F + TIGVEFG+R ++++ ++IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE F+++TRSYYRG+ G ++V DV+
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVT 90
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+II+GD VGKSCLL QFT+ ++
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRF 32
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 72/87 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FK+II+GD VGKSCLL QFT+ +F + TIGVEFG+R ++++ ++IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE F+++TRSYYRG+ G ++V DV+
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVT 90
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+II+GD VGKSCLL QFT+ ++
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRF 32
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 67/93 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT+ F D TIGVEF TR +V G+ IK Q
Sbjct: 12 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQ 71
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 72 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKA 104
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
G Y Y+FK ++IGD GVGKS LL +FT+ + L
Sbjct: 12 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSL 46
>gi|124087881|ref|XP_001346913.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia strain
d4-2]
gi|145474789|ref|XP_001423417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057302|emb|CAH03286.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia]
gi|74834222|emb|CAI44486.1| rab_C66 [Paramecium tetraurelia]
gi|124390477|emb|CAK56019.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FK+II+GD VGKSCLL QFT+ +F + TIGVEFG+R ++++ ++IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINEKQIKLQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE F+++TRSYYRG+ G ++V DV++
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVTN 91
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+II+GD VGKSCLL QFT+ ++
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRF 32
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M S Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MADNSDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I++ G+ IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 42
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 67/93 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT F D TIGVEF TR I+V G+ +K Q
Sbjct: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKA 103
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
G Y Y+FK ++IGD GVGKS LL +FT + L + T
Sbjct: 11 GGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKST 50
>gi|145479417|ref|XP_001425731.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833719|emb|CAI39333.1| rab_B47 [Paramecium tetraurelia]
gi|124392803|emb|CAK58333.1| unnamed protein product [Paramecium tetraurelia]
Length = 250
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 6/102 (5%)
Query: 75 MSSSGQY------SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRII 128
MSS+G S+ Y+FKYIIIGDM VGKSCLL QF +++F TIGVEFG RII
Sbjct: 1 MSSTGNLNDKFDTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARII 60
Query: 129 EVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+ +KL IWDTAGQE FR++TRSYYR +A A++V D++
Sbjct: 61 RIQNVALKLSIWDTAGQESFRSITRSYYRSSAAAIIVYDITK 102
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 6/43 (13%)
Query: 4 MSSSGQY------SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS+G S+ Y+FKYIIIGDM VGKSCLL QF ++++
Sbjct: 1 MSSTGNLNDKFDTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRF 43
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIS 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGKS LL +FT ++
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEF 35
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F D TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 68/93 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT+ F D TIGVEF TR ++V + IK Q
Sbjct: 11 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IWDTAGQER+RA+T +YYRGA GAL+V DV+ V
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTKV 103
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
G Y Y+FK ++IGD GVGKS LL +FT+ + L + T
Sbjct: 11 GGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKST 50
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 66/90 (73%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +F +F D TIGVEF TR IE G+ IK QIWDT
Sbjct: 6 YHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
AGQER+RA+T +YYRGA GAL+V D+S K
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISQQK 95
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK ++IGD GVGKS LL +F ++
Sbjct: 6 YHYLFKVVLIGDSGVGKSNLLSRFARNEF 34
>gi|145539502|ref|XP_001455441.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833837|emb|CAI39373.1| rab_A09 [Paramecium tetraurelia]
gi|124423249|emb|CAK88044.1| unnamed protein product [Paramecium tetraurelia]
Length = 252
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 6/102 (5%)
Query: 75 MSSSGQY------SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRII 128
MSS+G S+ Y+FKYIIIGDM VGKSCLL QF +++F TIGVEFG RII
Sbjct: 1 MSSTGNLNDKFDTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARII 60
Query: 129 EVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+ +KL IWDTAGQE FR++TRSYYR +A A++V D++
Sbjct: 61 RIQNVALKLSIWDTAGQESFRSITRSYYRSSAAAIIVYDITK 102
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 6/43 (13%)
Query: 4 MSSSGQY------SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS+G S+ Y+FKYIIIGDM VGKSCLL QF ++++
Sbjct: 1 MSSTGNLNDKFDTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRF 43
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 68/88 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 16 SYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 75
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 76 TAGQERYRAITSAYYRGAVGALLVYDIA 103
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
SY Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 16 SYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 47
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 72/100 (72%)
Query: 73 SKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHG 132
S S++ +Y Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G
Sbjct: 5 SVTSANKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEG 64
Query: 133 EKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
++IKLQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 65 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 104
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S++ +Y Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 8 SANKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 43
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTE 101
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|402221534|gb|EJU01603.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 242
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++ K+IIIG+ G GKSCLLH F F HTIGVEF +R I V + +KLQ+WD
Sbjct: 15 AYDFLLKFIIIGEAGTGKSCLLHHFIHNTFKEHSQHTIGVEFSSRTIRVGEKSVKLQLWD 74
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQERFR+VTRSYYRGAA L+V D+++
Sbjct: 75 TAGQERFRSVTRSYYRGAAAVLLVYDITN 103
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ K+IIIG+ G GKSCLLH F +
Sbjct: 15 AYDFLLKFIIIGEAGTGKSCLLHHFIHNTF 44
>gi|47208089|emb|CAF90842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 435
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNLLWA 70
+Y+Y+FKYIIIGD + + +F E+ + CL Q + R A
Sbjct: 2 AYAYLFKYIIIGDTAPLQVSPI-RFNERP-------ERALECLGGCLFRQQVERPAHAQA 53
Query: 71 LVSKMSSSGQYSY-------------SYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
S + + + + + + G GVGKSCLL QFT+++F P
Sbjct: 54 GCSSLPPVPEGRWGGPIGPPPQEDPGAAVPAAPLAGSAGVGKSCLLLQFTDKRFQPVHDL 113
Query: 118 TIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
TIGVEFG R+I + G++IKLQIWDTAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 114 TIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIT 165
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS SY Y+FK +++GD GVGKS LL +FT +F + TIGVEF TR IE+ +
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKI 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 95
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
MS SY Y+FK +++GD GVGKS LL +FT ++ L
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCL 39
>gi|392578447|gb|EIW71575.1| hypothetical protein TREMEDRAFT_27581 [Tremella mesenterica DSM
1558]
Length = 240
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 68/88 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK+I+IG+ G GKSCLL+ + F HTIGVEF +R + + + IKLQ+WD
Sbjct: 12 AYDYLFKFIVIGEAGTGKSCLLYHCIHETFKEHSAHTIGVEFSSRTLRIGDKNIKLQLWD 71
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDIT 99
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
+Y Y+FK+I+IG+ G GKSCLL+ + + + + + + S + I KN+
Sbjct: 12 AYDYLFKFIVIGEAGTGKSCLLYHCIHETF---KEHSAHTIGVEFSSRTLRIGDKNIKLQ 68
Query: 68 LWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQ-------KFMPDC----- 115
LW ++GQ + + + G G + L++ T + +++ DC
Sbjct: 69 LW------DTAGQERFRSVTRSYYRGAAG---ALLVYDITSRQSFANLSRWLTDCRALAS 119
Query: 116 PHTIGVEFGTRIIEVHGEKIK 136
PH + V G ++ + +++
Sbjct: 120 PHLVVVLVGNKLDKEEDREVE 140
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 71/96 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ +G+ Y+FK ++IGD VGKS LL +F +F + TIGVEF T+++E+ G++
Sbjct: 1 MAENGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKE 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IK QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISR 96
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M+ +G+ Y+FK ++IGD VGKS LL +F ++
Sbjct: 1 MAENGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEF 37
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 70/96 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++S SY Y+ K ++IGD GVGKSCLL +F++ F P TIG++F R IE+ G++
Sbjct: 1 MATSKNASYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKR 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IKLQIWDTAGQERFR +T +YYRGA G L+ DV+
Sbjct: 61 IKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTD 96
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M++S SY Y+ K ++IGD GVGKSCLL +F++ +
Sbjct: 1 MATSKNASYDYLIKLLLIGDSGVGKSCLLLRFSDDSF 37
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I+ G+
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 95
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 70/92 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR +E+ G+++K QIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
DTAGQER+RA+T +YYRGA GAL+V D++ +
Sbjct: 70 DTAGQERYRAITSAYYRGALGALIVYDIAKTE 101
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y++K ++IGD GVGKS LL +FT ++ L
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNL 42
>gi|343418356|emb|CCD19762.1| small GTPase, putative [Trypanosoma vivax Y486]
Length = 200
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I++G+ GKS LLH+F E F D TIGVEFG++I+E+ GEK+KLQIWDT
Sbjct: 5 YQQLMKLIVVGESATGKSSLLHRFVEDAFSEDQAQTIGVEFGSKIVELGGEKVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQER+++VTRSYYRGA G L+V D+S
Sbjct: 65 AGQERYKSVTRSYYRGAVGCLIVYDISQ 92
>gi|145491373|ref|XP_001431686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398791|emb|CAK64288.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FK+IIIGD VGKSCLL QF ++KF D TIGVEFG++ + + + IKLQIWD
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE F+++TRSYYRG+ AL+V DV+
Sbjct: 63 TAGQESFKSITRSYYRGSICALIVYDVT 90
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
SY+Y+FK+IIIGD VGKSCLL QF ++K+ L T + + S + I +KN+
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTT---IGVEFGSKTLNIRQKNIKLQ 59
Query: 68 LWALVSKMSSSGQYSYSYI 86
+W ++GQ S+ I
Sbjct: 60 IW------DTAGQESFKSI 72
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|340501053|gb|EGR27873.1| rab2 gtpase, putative [Ichthyophthirius multifiliis]
Length = 486
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 73/88 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FK+I++GD GVGKSC+L +F+E++++ D TIGVEFG++ +E++ + I+ QIWD
Sbjct: 3 SYHYLFKFILVGDTGVGKSCILLKFSEERYVSDHDATIGVEFGSKTLEINKQTIRFQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++T+SYY+G+ G ++V DV+
Sbjct: 63 TAGQESFRSITKSYYKGSIGVILVFDVN 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNLLWA 70
SY Y+FK+I++GD GVGKSC+L +F+E++Y T + + S + I ++ + +
Sbjct: 3 SYHYLFKFILVGDTGVGKSCILLKFSEERYVSDHDAT---IGVEFGSKTLEINKQTIRFQ 59
Query: 71 LVSKMSSSGQYSYSYIFKYIIIGDMGV 97
+ ++GQ S+ I K G +GV
Sbjct: 60 I---WDTAGQESFRSITKSYYKGSIGV 83
>gi|340504779|gb|EGR31194.1| hypothetical protein IMG5_116200 [Ichthyophthirius multifiliis]
Length = 221
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 71/88 (80%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y+Y+FK+I+IG+ VGKSCLL QFTE +F + TIGVEFG++ I V+ IK+QIWDT
Sbjct: 4 YNYLFKFILIGNTCVGKSCLLSQFTEGRFKKEHDATIGVEFGSKNILVNDTVIKIQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE F+++TRSYYRG+ G+L++ D++H
Sbjct: 64 AGQESFKSITRSYYRGSIGSLLIFDITH 91
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y+Y+FK+I+IG+ VGKSCLL QFTE ++
Sbjct: 4 YNYLFKFILIGNTCVGKSCLLSQFTEGRF 32
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 71/97 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+S+ +Y Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++I
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 67
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 68 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 104
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+S+ +Y Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 43
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 68/87 (78%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V+G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|413922835|gb|AFW62767.1| hypothetical protein ZEAMMB73_212646 [Zea mays]
Length = 199
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 11/88 (12%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT IGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFT-----------IGVEFGARMITIDNKPIKLQIWD 50
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 51 TAGQESFRSITRSYYRGAAGALLVYDIT 78
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRL 55
SY+Y+FKYIIIGD GVGKSCLL QFT F +T D ++L
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTIGVEFGARMITIDNKPIKL 46
>gi|253743957|gb|EET00230.1| Rab2b [Giardia intestinalis ATCC 50581]
Length = 227
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 8/101 (7%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS G + YIFKYII+GD VGKSCLL +F EQKF+P T+GVEF + ++V +
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKD 57
Query: 135 -----IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IK+QIWDTAGQE+FR++TRSYYRGAAGAL+V DV++
Sbjct: 58 GSEKTIKVQIWDTAGQEQFRSITRSYYRGAAGALLVYDVTN 98
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS G + YIFKYII+GD VGKSCLL +F EQK+
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKF 34
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+ Y Y+FK +++GD GVGKS LL +FT +F + TIGVEF TR IE+ + IK
Sbjct: 2 SAEADDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQER+RA+T +YYRGA GAL+V DV++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTN 95
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S+ Y Y+FK +++GD GVGKS LL +FT ++ L
Sbjct: 2 SAEADDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCL 38
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+ + +Y Y+FK ++IGD G GKS LL +FT +F D TIGVEF TR I V G+ IK
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+ + +Y Y+FK ++IGD G GKS LL +FT ++ L + T
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRST 42
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I+ G+
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 95
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S + Y Y+FK ++ GD GVGKS LL +FT+ +F PD TIGVEF TR I + G+ IK
Sbjct: 2 SKAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQER+RA+T +YYRGA GA++V D+++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAIGAVLVYDITN 95
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S + Y Y+FK ++ GD GVGKS LL +FT+ ++
Sbjct: 2 SKAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQF 36
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query: 54 RLVSTSQPITRKNLLWALV------SKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFT 107
R V R+ WALV KM+ Y Y+FK ++IGD GVGKS +L +FT
Sbjct: 103 RPVRARPASERRPAGWALVRARSIDQKMAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFT 162
Query: 108 EQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVID 167
+F + TIGVEF TR +++ G+ +K QIWDTAGQER+RA+T +YYRGA GAL+V D
Sbjct: 163 RNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 222
Query: 168 VS 169
++
Sbjct: 223 IT 224
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 138 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 168
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQIWDT 66
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDIA 93
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 70/94 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S + + Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ IE++G++IK
Sbjct: 5 SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|45201075|ref|NP_986645.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|44985858|gb|AAS54469.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|374109896|gb|AEY98801.1| FAGL021Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
SSSG +Y I K +++GD GVGKSCLL +F E KF P TIG++F + ++++G+KI
Sbjct: 9 SSSGAKNYDSIMKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKAVDINGKKI 68
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 69 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 103
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SSSG +Y I K +++GD GVGKSCLL +F E K+
Sbjct: 9 SSSGAKNYDSIMKILLVGDSGVGKSCLLVRFVEDKF 44
>gi|307777764|dbj|BAJ21278.1| Rab-family small GTPase Rab2B [Tetrahymena thermophila]
Length = 218
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+ KYI+IGD GVGKS L+ QFT++ F T+GVEFG ++I+++G+ +KLQIWD
Sbjct: 2 SYAYLLKYIVIGDTGVGKSSLIMQFTQEVFRDKHDITVGVEFGAKVIKINGQSVKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++ RSYYR AGAL+V D++
Sbjct: 62 TAGQEDFRSIVRSYYRSTAGALVVYDITR 90
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+ KYI+IGD GVGKS L+ QFT++ +
Sbjct: 2 SYAYLLKYIVIGDTGVGKSSLIMQFTQEVF 31
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 4 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 64 AGQERYRAITSAYYRGAVGALLVYDIA 90
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 4 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 34
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNL 38
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 71/97 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+++ +Y Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++I
Sbjct: 5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 64
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 101
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M + +++ +Y Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 40
>gi|145522440|ref|XP_001447064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831433|emb|CAI39304.1| rab_A70 [Paramecium tetraurelia]
gi|124414564|emb|CAK79667.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 70/88 (79%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FK+IIIGD VGKSCLL QF ++KF D TIGVEFG++ + + + IKLQIWD
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE F+++TRSYYRG+ AL+V DV+
Sbjct: 63 TAGQESFKSITRSYYRGSICALIVYDVT 90
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL--- 67
SY+Y+FK+IIIGD VGKSCLL QF ++K+ L T + + S + I +KN+
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTT---IGVEFGSKTLNIRQKNIKLQ 59
Query: 68 LWALVSKMSSSGQYSYSYI 86
+W ++GQ S+ I
Sbjct: 60 IW------DTAGQESFKSI 72
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNL 38
>gi|330845862|ref|XP_003294785.1| Rab GTPase [Dictyostelium purpureum]
gi|325074682|gb|EGC28686.1| Rab GTPase [Dictyostelium purpureum]
Length = 181
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
S++ +FKYI++GD VGKS LL QF +++F+P+ TIGVEFG+R + + ++IKLQIWD
Sbjct: 20 SHTQLFKYIMVGDSAVGKSNLLLQFIDKRFVPNSDFTIGVEFGSRSLNIENKQIKLQIWD 79
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE+FR++TR+YYRGAA A++V D++
Sbjct: 80 TAGQEKFRSITRAYYRGAACAMIVYDITR 108
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
T + S++ +FKYI++GD VGKS LL QF ++++ T
Sbjct: 12 TFNDRKTSSHTQLFKYIMVGDSAVGKSNLLLQFIDKRFVPNSDFT 56
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y YIFK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y YIFK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYIFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|308160328|gb|EFO62821.1| Rab2b [Giardia lamblia P15]
Length = 227
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 76/101 (75%), Gaps = 8/101 (7%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS G + YIFKYII+GD VGKSCLL +F EQKF+P T+GVEF + ++V +
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKD 57
Query: 135 -----IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K+QIWDTAGQE+FR++TRSYYRGAAGAL+V DV++
Sbjct: 58 GSEKTVKVQIWDTAGQEQFRSITRSYYRGAAGALLVYDVTN 98
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS G + YIFKYII+GD VGKSCLL +F EQK+
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKF 34
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MGGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 95
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MGGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 95
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|145484322|ref|XP_001428171.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834551|emb|CAI44580.1| rab_A05 [Paramecium tetraurelia]
gi|124395255|emb|CAK60773.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 68/88 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FKYIIIGD GVGKSCLL Q +++F TIGVEFG + IEV +KLQ+WD
Sbjct: 2 SYDFLFKYIIIGDSGVGKSCLLLQLLDKRFRQKHEVTIGVEFGAKPIEVDDLNVKLQVWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE F+++TR+YYR AAGAL+V DV+
Sbjct: 62 TAGQEAFKSITRTYYRSAAGALIVYDVT 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FKYIIIGD GVGKSCLL Q ++++
Sbjct: 2 SYDFLFKYIIIGDSGVGKSCLLLQLLDKRF 31
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
Q ++ Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QI
Sbjct: 4 QSNFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQI 63
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIS 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Q ++ Y+FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 4 QSNFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKST 42
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS Q Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR I+ G+
Sbjct: 1 MSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK Q+WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIA 95
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
MS Q Y Y++K ++IGD GVGKS LL +FT ++ L + T
Sbjct: 1 MSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKST 44
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|412986644|emb|CCO15070.1| predicted protein [Bathycoccus prasinos]
Length = 258
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 24/112 (21%)
Query: 82 SYSYIFKYIIIGDMG------------------------VGKSCLLHQFTEQKFMPDCPH 117
SY+Y+FKYIIIGD G VGKSCLL QFT+++F
Sbjct: 2 SYAYLFKYIIIGDTGKHILLFFTVTYTKSGFLEIIKNARVGKSCLLLQFTDKRFQRVHDL 61
Query: 118 TIGVEFGTRIIEVHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
TIGVEFG+R++ ++ +++KLQIWDTAGQE FR++TRSYYRGAAGAL+V DVS
Sbjct: 62 TIGVEFGSRMVTINNQQVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDVS 113
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 24/54 (44%)
Query: 11 SYSYIFKYIIIGDMG------------------------VGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD G VGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGKHILLFFTVTYTKSGFLEIIKNARVGKSCLLLQFTDKRF 55
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|440803267|gb|ELR24175.1| RabE family small GTPase, partial [Acanthamoeba castellanii str.
Neff]
Length = 155
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 71/96 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+ G+ +Y Y+ K ++IGD GVGKSCLL +F++ F P TIG++F R IE+ G++IK
Sbjct: 8 AGGKQAYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELEGKRIK 67
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
LQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 68 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 103
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ G+ +Y Y+ K ++IGD GVGKSCLL +F++ +
Sbjct: 8 AGGKQAYDYLIKLLLIGDSGVGKSCLLLRFSDDSF 42
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MNHKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MNHKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 15/149 (10%)
Query: 25 GVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNLLWA----LVSKMSSSGQ 80
GVG+ +LH + K + R+ + P ++ A L+ + +
Sbjct: 2 GVGQGGVLHPVRQLK-----------LRARVTPAATPPGPTDIAAAPAPSLLGRAMGTRD 50
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIW
Sbjct: 51 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 110
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 111 DTAGQERYRAITSAYYRGAVGALLVYDIA 139
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 53 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 83
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTD 92
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|154342945|ref|XP_001567418.1| putative ras-related rab-4 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064750|emb|CAM42855.1| putative ras-related rab-4 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 203
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 67/86 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I+IGD GVGKSCLLH+F E F + TIG+E+G +II++ G K+KLQIWDT
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIEDIFSEEQTQTIGIEYGAKIIDLGGVKVKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDV 168
AGQER+++VTRSYYRGA G L+V DV
Sbjct: 65 AGQERYKSVTRSYYRGATGCLIVYDV 90
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTE 37
Y + K I+IGD GVGKSCLLH+F E
Sbjct: 5 YQQLMKLIVIGDSGVGKSCLLHRFIE 30
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V DVS
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDVS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G L++ DV+ K
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDEK 95
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 34
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y ++FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKST 42
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V G+ IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D +
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDTT 92
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL---L 68
Y ++FK ++IGD GVGKS LL +FT ++ L + T + + + S + K + +
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST---IGVEFATRSIQVDGKTIKAQI 62
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
W ++GQ Y I G +G + L++ T+++ +C
Sbjct: 63 W------DTAGQERYRAITSAYYRGAVG---ALLVYDTTKKQTFANCER 102
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|414967|gb|AAA80150.1| Rab2, partial [Dictyostelium discoideum]
Length = 199
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 66/81 (81%)
Query: 90 IIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQERFR 149
IIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDTAGQE FR
Sbjct: 1 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFR 60
Query: 150 AVTRSYYRGAAGALMVIDVSH 170
++TRSYYRG+AGAL+V D++
Sbjct: 61 SITRSYYRGSAGALLVYDITR 81
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 19 IIIGDMGVGKSCLLHQFTEQKY 40
IIIGD GVGKSCLL QFT++++
Sbjct: 1 IIIGDTGVGKSCLLLQFTDKRF 22
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 70/96 (72%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S S Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ I ++G++IK
Sbjct: 5 SEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
QIWDTAGQERFRAVT +YYRGA GAL+V D+S V+
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQ 100
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|342186413|emb|CCC95899.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 199
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I++GD G GKS LLH+F E F+ D TIGVEFG++++E+ G KIKLQIWDT
Sbjct: 5 YQKLMKLIVLGDSGSGKSSLLHRFVEDTFVEDRTQTIGVEFGSKVVELSGRKIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
+GQER+++VTRSYYRGA G L+V D++
Sbjct: 65 SGQERYKSVTRSYYRGAVGCLIVYDITQ 92
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 75 MSSSG-QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE 133
M+S G Q Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR I+ G+
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 134 KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK Q+WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIA 96
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 4 MSSSG-QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
M+S G Q Y Y++K ++IGD GVGKS LL +FT ++ L + T
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKST 45
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|56758006|gb|AAW27143.1| SJCHGC06676 protein [Schistosoma japonicum]
gi|226467426|emb|CAX69589.1| Ras-related protein Rab-4A [Schistosoma japonicum]
Length = 215
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+ K++IIG+ GK+CL+ F E KF D HTIGVEFGT+I+ V + +KLQIWDT
Sbjct: 6 YDYLLKFLIIGNSAAGKTCLMRWFLEGKFKQDSLHTIGVEFGTKILRVDSKSVKLQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERF+ +TRSYYRGAA AL+V D++
Sbjct: 66 AGQERFQCITRSYYRGAACALVVYDITD 93
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+ K++IIG+ GK+CL+ F E K+
Sbjct: 6 YDYLLKFLIIGNSAAGKTCLMRWFLEGKF 34
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V DVS
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDVS 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I+ G+
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 95
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV IK
Sbjct: 2 SKDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 94
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SKDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 38
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y Y+FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V DV+ +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRL 97
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
MS Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G L++ DV+ K
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKK 95
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 34
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V DV+ +
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRL 97
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 69/94 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S S Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ I+++G++IK
Sbjct: 5 SEDDRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
AGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHV 97
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V G+ IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D +
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDTT 92
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL---L 68
Y ++FK ++IGD GVGKS LL +FT ++ L + T + + + S + K + +
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST---IGVEFATRSIQVDGKTIKAQI 62
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
W ++GQ Y I G +G + L++ T+++ +C
Sbjct: 63 W------DTAGQERYRAITSAYYRGAVG---ALLVYDTTKEQTFANCER 102
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|159117831|ref|XP_001709135.1| Rab2b [Giardia lamblia ATCC 50803]
gi|157437250|gb|EDO81461.1| Rab2b [Giardia lamblia ATCC 50803]
Length = 227
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 76/101 (75%), Gaps = 8/101 (7%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSS G + YIFKYII+GD VGKSCLL +F EQKF+P T+GVEF + ++V +
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKD 57
Query: 135 -----IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K+QIWDTAGQE+FR++TRSYYRGAAGAL+V DV++
Sbjct: 58 GSEKTVKVQIWDTAGQEQFRSITRSYYRGAAGALLVYDVTN 98
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSS G + YIFKYII+GD VGKSCLL +F EQK+
Sbjct: 1 MSSGGHH---YIFKYIIVGDSAVGKSCLLLRFVEQKF 34
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 2 ASRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 ASRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|198422153|ref|XP_002119751.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 177
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 74/98 (75%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++SG +Y Y+FK ++IGD GVGK+C+L +F+E F TIG++F R I++ G+K
Sbjct: 1 MAASGGKTYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTIDLDGKK 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
+KLQIWDTAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 61 VKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDK 98
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M++SG +Y Y+FK ++IGD GVGK+C+L +F+E +
Sbjct: 1 MAASGGKTYDYLFKLLLIGDSGVGKTCVLFRFSEDHF 37
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHV 96
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V G+ IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D +
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDTT 92
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL---L 68
Y ++FK ++IGD GVGKS LL +FT ++ L + T + + + S + K + +
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST---IGVEFATRSIQVDGKTIKAQI 62
Query: 69 WALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
W ++GQ Y I G +G + L++ T+++ +C
Sbjct: 63 W------DTAGQERYRAITSAYYRGAVG---ALLVYDTTKEQTFANCER 102
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR I+V G+ +K Q
Sbjct: 11 AEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 102
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 11 AEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCL 45
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 2 STKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITAAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 STKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 72/95 (75%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+++G+ Y +++K +++G+ GVGKS LL +FT +F PD TIGVEF TR I H +
Sbjct: 1 MANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKN 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
I+ QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IRAQIWDTAGQERYRAITNAYYRGALGALVVYDIT 95
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M+++G+ Y +++K +++G+ GVGKS LL +FT ++
Sbjct: 1 MANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEF 37
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I++ + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|281209429|gb|EFA83597.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 193
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y++ KYI++GD VGKS L QF +++F P+ TIGVEFG+RII++ +++K+Q+WD
Sbjct: 20 NYTHFLKYIMVGDSAVGKSNLTLQFVDRRFSPNSEFTIGVEFGSRIIDIDNKQLKIQVWD 79
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE+FR++TR+YYRGA GA++V D++
Sbjct: 80 TAGQEKFRSITRAYYRGAVGAMIVYDITR 108
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K
Sbjct: 2 SREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK +IIGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ +K Q
Sbjct: 11 AEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 102
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK +IIGD GVGKS LL +FT+ ++ L
Sbjct: 11 AEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCL 45
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 71/97 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
S + Q +Y Y+FK ++IGD GVGK+CLL +F E F P TIG++F + +E+ G++I
Sbjct: 12 SIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKRI 71
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQ+WDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 72 KLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKK 108
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
S + Q +Y Y+FK ++IGD GVGK+CLL +F E +
Sbjct: 12 SIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSF 47
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ IK QIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIT 93
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 2 SSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
SS Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 68/93 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ +Y SY+ ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK
Sbjct: 2 ANDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V DVS
Sbjct: 62 SQIWDTAGQERYRAITSAYYRGAVGALLVYDVS 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
++ +Y SY+ ++IGD GVGKS LL +FT ++ L + T
Sbjct: 2 ANDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 43
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 72/100 (72%)
Query: 70 ALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIE 129
+L+ + + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+
Sbjct: 40 SLLGRAMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQ 99
Query: 130 VHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 100 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 139
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 53 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 83
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
AGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHV 97
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK Q
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQ 69
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 70 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 101
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 44
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 15 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 74
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 75 AGQERYRAITSAYYRGAVGALLVYDIA 101
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 15 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 45
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Query: 75 MSSSGQYS--YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHG 132
MS+SG+ S Y I K ++IGD GVGKSCLL +F E KF P TIG++F + ++++G
Sbjct: 1 MSASGENSKQYDSIMKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDING 60
Query: 133 EKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+KIKLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 61 KKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 98
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 4 MSSSGQYS--YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MS+SG+ S Y I K ++IGD GVGKSCLL +F E K+
Sbjct: 1 MSASGENSKQYDSIMKVLLIGDSGVGKSCLLVRFVEDKF 39
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 26 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 85
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 86 AGQERYRAITSAYYRGAVGALLVYDIA 112
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 26 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 56
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I V + +K QIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIS 93
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 42
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK +IIGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ +K Q
Sbjct: 11 AEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQ 70
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 71 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 102
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK +IIGD GVGKS LL +FT+ ++ L
Sbjct: 11 AEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCL 45
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+GQ Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR I G+ IK
Sbjct: 6 TGQEDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKA 65
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 97
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+GQ Y Y++K ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 TGQEDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKST 46
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK Q
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQ 69
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 70 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 101
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 44
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 69/91 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK QI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQI 66
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
WDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|74025730|ref|XP_829431.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|1195465|gb|AAC46990.1| ras-related protein RAB-4 [Trypanosoma brucei rhodesiense]
gi|70834817|gb|EAN80319.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261335424|emb|CBH18418.1| ras-related rab-4, putative [Trypanosoma brucei gambiense DAL972]
Length = 198
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y + K I++GD G GKS LLH+F E F + TIGVEFG++IIE+ G +IKLQIWDT
Sbjct: 5 YQQLMKLIVVGDSGTGKSSLLHRFVEDTFSEERAQTIGVEFGSKIIELSGRRIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQER+++VTRSYYRGA G L+V D++
Sbjct: 65 AGQERYKSVTRSYYRGAVGCLIVYDITE 92
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y + K I++GD G GKS LLH+F E +
Sbjct: 5 YQQLMKLIVVGDSGTGKSSLLHRFVEDTF 33
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + V G+ IK QIWD
Sbjct: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ IK
Sbjct: 2 SSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITAAYYRGAVGALLVYDIA 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
SS Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 SSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 78 SGQY----SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE 133
SG Y Y Y+FK +IIGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+
Sbjct: 7 SGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGK 66
Query: 134 KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 103
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 7 SGQY----SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
SG Y Y Y+FK +IIGD GVGKS LL +FT+ ++ L
Sbjct: 7 SGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCL 46
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK Q
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQ 69
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 70 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 101
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 44
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|403338085|gb|EJY68271.1| hypothetical protein OXYTRI_11214 [Oxytricha trifallax]
Length = 216
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 70/90 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y +FKYIIIGD VGKSC+LHQ+ KF + HTIGVEFG + + V+ + IK+QIWDT
Sbjct: 10 YDLLFKYIIIGDTSVGKSCILHQYLRNKFNSNSKHTIGVEFGMKYLRVNDQIIKIQIWDT 69
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
AGQER+++VTR Y+RG+ G ++V DV++++
Sbjct: 70 AGQERYKSVTRGYFRGSLGVIIVYDVTNLE 99
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y +FKYIIIGD VGKSC+LHQ+ K+
Sbjct: 10 YDLLFKYIIIGDTSVGKSCILHQYLRNKF 38
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+S + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I G+
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+S + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKST 41
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QIW
Sbjct: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|74833863|emb|CAI39385.1| rab_B70 [Paramecium tetraurelia]
Length = 211
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 82 SYSYIFKYIIIGD--MGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
SY+Y+FK+IIIGD +GVGKSCLL QF ++KF D TIGVEFG++ + + + IKLQI
Sbjct: 3 SYAYLFKFIIIGDSKLGVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQI 62
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQE F+++TRSYYRG+ AL+V DV+
Sbjct: 63 WDTAGQESFKSITRSYYRGSICALIVYDVT 92
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 14/81 (17%)
Query: 11 SYSYIFKYIIIGD--MGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL- 67
SY+Y+FK+IIIGD +GVGKSCLL QF ++K+ L T + + S + I +KN+
Sbjct: 3 SYAYLFKFIIIGDSKLGVGKSCLLLQFLDRKFKLDHDTT---IGVEFGSKTLNIRQKNIK 59
Query: 68 --LWALVSKMSSSGQYSYSYI 86
+W ++GQ S+ I
Sbjct: 60 LQIW------DTAGQESFKSI 74
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+S + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I G+
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+S + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 74/101 (73%)
Query: 72 VSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
+S + SS +Y Y+FK ++IGD GVGK+C+L +F+E F TIG++F R IE+
Sbjct: 10 ISAIISSMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD 69
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
G+KIKLQIWDTAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 70 GKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEK 110
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SS +Y Y+FK ++IGD GVGK+C+L +F+E +
Sbjct: 15 SSMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAF 49
>gi|326917676|ref|XP_003205122.1| PREDICTED: ras-related protein Rab-2A-like [Meleagris gallopavo]
Length = 352
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Query: 81 YSYSYIFKYIIIG-DMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
++ +F ++I+G + GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQI
Sbjct: 140 FAPPTLFFFVIVGFETGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQI 199
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 200 WDTAGQESFRSITRSYYRGAAGALLVYDIT 229
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR +++ G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVFDIT 95
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS +L +FT ++FL
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFFL 39
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ IK QIWD
Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQIWD 67
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
TAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITRHV 98
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKSCLL +F + + PD TIGV+F R IE+ G+ IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR +T SYYRGA G ++V DV+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTD 92
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYV 51
Y ++FK ++IGD GVGKSCLL +F + Y T DY+
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLLRFADDTY------TPDYI 38
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
S Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
S Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK I+IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK I+IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCL 39
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I+ G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
AGQER+RA+T +YYRGA GAL+V D+S HV
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKHV 97
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S S Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ ++++G++IK
Sbjct: 5 SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|118379514|ref|XP_001022923.1| Ras-related protein Rab-2A, putative [Tetrahymena thermophila]
gi|89304690|gb|EAS02678.1| Ras-related protein Rab-2A, putative [Tetrahymena thermophila
SB210]
Length = 244
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 10/97 (10%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK+IIIG+ VGKSC+L QFTE +F + TIGVEFG++ IEV G IK+QIWDT
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRFKREHDATIGVEFGSKNIEVDGYTIKIQIWDT 63
Query: 143 AGQERFRAVTRSYYRG----------AAGALMVIDVS 169
AGQE FR++TRSYYRG + GAL+V DV+
Sbjct: 64 AGQESFRSITRSYYRGIKLMKFPQNRSVGALLVYDVT 100
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK+IIIG+ VGKSC+L QFTE ++
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRF 32
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 69/91 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ +K QI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
WDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|297800396|ref|XP_002868082.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
gi|297313918|gb|EFH44341.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y FKYI+IGD GVGKSCLL +FT+++F TIGVEFG++ I + IKLQIWD
Sbjct: 2 SYAYRFKYILIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGSKKITIDNIPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR+VTRSYYRG AG L+V D++
Sbjct: 62 TAGQESFRSVTRSYYRGRAGTLLVYDITR 90
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y FKYI+IGD GVGKSCLL +FT++++
Sbjct: 2 SYAYRFKYILIGDTGVGKSCLLLKFTDKRF 31
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S S Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ ++++G++IK
Sbjct: 5 SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+G Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V+ + IK
Sbjct: 3 TGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+G Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 TGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNL 38
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE++G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITSEK 94
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S S Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ ++++G++IK
Sbjct: 5 SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|403412347|emb|CCL99047.1| predicted protein [Fibroporia radiculosa]
Length = 258
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 17/105 (16%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI-- 139
+Y ++ KYIIIG+ G GKSCLLHQFT F HTIGVEF +R + + ++IKLQ+
Sbjct: 16 AYDFLMKYIIIGEAGTGKSCLLHQFTHNSFKEHSQHTIGVEFSSRTVNLGEKRIKLQVYE 75
Query: 140 ---------------WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQERFR+VTRSYYRGAAGA++V D++
Sbjct: 76 ISSSFICRVPNKSKLWDTAGQERFRSVTRSYYRGAAGAILVYDIT 120
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++ KYIIIG+ G GKSCLLHQFT +
Sbjct: 16 AYDFLMKYIIIGEAGTGKSCLLHQFTHNSF 45
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
AGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHV 122
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 63
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ +E+ G+ IK Q
Sbjct: 6 GHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
G Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 GHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNL 40
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 40
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 69/96 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M +G + Y+FK ++IGD VGKS LL +F +F + TIGVEF T+ +E+ G++
Sbjct: 1 MDENGDGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKE 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISR 96
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M +G + Y+FK ++IGD VGKS LL +F ++
Sbjct: 1 MDENGDGAEEYLFKIVLIGDSAVGKSNLLSRFARNEF 37
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 31 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 90
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 91 AGQERYRAITSAYYRGAVGALLVYDIA 117
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 31 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 61
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
SS+ SY I K +++GD GVGKSCLL +F E KF P TIG++F + ++++G+K+
Sbjct: 10 SSANAKSYDSIMKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKV 69
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
KLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 70 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 104
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SS+ SY I K +++GD GVGKSCLL +F E K+
Sbjct: 10 SSANAKSYDSIMKILLVGDSGVGKSCLLVRFVEDKF 45
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKST 41
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 39 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 98
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 99 AGQERYRAITSAYYRGAVGALLVYDIA 125
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 39 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 69
>gi|427778911|gb|JAA54907.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 257
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPITRKNL-LW 69
Y ++FK +IIGD GVGKS LL +F + F G +T V ++ + R L +W
Sbjct: 4 EYDHLFKLLIIGDSGVGKSSLLLRFADN-TFTGNYITTIGVDFKIRTLEVDGERVKLQIW 62
Query: 70 ALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIE 129
++GQ + GD GVGKS LL +F + F + TIGV+F R +E
Sbjct: 63 ------DTAGQERFR--------GDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLE 108
Query: 130 VHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
V GE++KLQIWDTAGQERFR +T +YYRG G ++V DV++
Sbjct: 109 VDGERVKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTN 149
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 71/95 (74%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR +++ G+
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ +K QI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+S + Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF T+ I G+
Sbjct: 1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHV 98
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+S + Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHL 39
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V + IK QIWD
Sbjct: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNL 40
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + + G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 40
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
++ Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIA 93
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
++ Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKST 42
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
++ Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIS 93
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
++ Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKST 42
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+ + +Y Y+FK ++IGD G GKS LL +FT +F + TIGVEF TR I V G+ +K
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ + +Y Y+FK ++IGD G GKS LL +FT ++ L
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSL 37
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 9 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 9 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 68 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 127
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 128 AGQERYRAITSAYYRGAVGALLVYDIA 154
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 68 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 98
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+ + +Y Y+FK ++IGD G GKS LL +FT +F + TIGVEF TR I V G+ +K
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKA 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ + +Y Y+FK ++IGD G GKS LL +FT ++ L
Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSL 37
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 72/103 (69%)
Query: 70 ALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIE 129
L S S+ +Y I K ++IGD GVGKSCLL +F + KF P TIG++F + +E
Sbjct: 3 GLRSTSGSTNGKNYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVE 62
Query: 130 VHGEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
++G+KIKLQ+WDTAGQERFR +T +YYRGA G ++V DV+ K
Sbjct: 63 INGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEK 105
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T S+ +Y I K ++IGD GVGKSCLL +F + K+
Sbjct: 7 TSGSTNGKNYDSIMKILLIGDSGVGKSCLLVRFVDDKF 44
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+G Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V+ + IK
Sbjct: 3 TGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKA 62
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+G Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 3 TGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNL 38
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 72 VSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
VS S +G+ SY I K ++IGD GVGKSCLL +F E KF P TIG++F + ++++
Sbjct: 7 VSASSGNGK-SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
G+K+KLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 104
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ SS SY I K ++IGD GVGKSCLL +F E K+
Sbjct: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKF 45
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 40
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+ + + Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ I+++G++IK
Sbjct: 5 NEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISR 98
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 71/96 (73%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
SS +Y Y+FK ++IGD GVGK+C+L +F+E F TIG++F R IE+ G+KIK
Sbjct: 2 SSMAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
LQIWDTAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 62 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEK 97
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SS +Y Y+FK ++IGD GVGK+C+L +F+E +
Sbjct: 2 SSMAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAF 36
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
S++G+ +Y I K ++IGD GVGKSCLL +F E KF P TIG++F + +E++G+KI
Sbjct: 7 SATGK-NYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKI 65
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQ+WDTAGQERFR +T +YYRGA G ++V DV+ K
Sbjct: 66 KLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEK 102
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ S++G+ +Y I K ++IGD GVGKSCLL +F E K+
Sbjct: 5 SASATGK-NYDSIMKILLIGDSGVGKSCLLVRFVEDKF 41
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 72 VSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
VS S +G+ SY I K ++IGD GVGKSCLL +F E KF P TIG++F + ++++
Sbjct: 7 VSASSGNGK-SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
G+K+KLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 104
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ SS SY I K ++IGD GVGKSCLL +F E K+
Sbjct: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKF 45
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK Q
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQ 69
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 70 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 101
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 44
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLTQDYVCLRLVSTSQPIT 63
M++ Y Y+FK ++IGD GVGKS +L +FT ++ L + T + T
Sbjct: 1 MANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 64 RKNLLWALVSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPH 117
K +W ++GQ Y I G +G + L++ T+++ + P
Sbjct: 61 VKAQIW------DTAGQERYRAITSAYYRGAVG---ALLVYDITKRQTFENVPR 105
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR ++V G+ IK Q
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQ 69
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 70 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 101
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 10 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 44
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ + Y+FK ++IGD VGKS LL +F +F P+ TIGVEF T+ +E++G+++K QI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQI 67
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
WDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+C+L +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V DV++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDVTNDK 94
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+C+L +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAF 33
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+
Sbjct: 1 MAYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITR 96
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MAYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|343428867|emb|CBQ72412.1| related to YPT31-GTP-binding protein of the rab family [Sporisorium
reilianum SRZ2]
Length = 313
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV-HGEKIKLQIWD 141
+ YI K+I+IGD VGKS LL + T+ +F+ D TIGVEFG+ +I + +GE +K+Q+WD
Sbjct: 30 WDYILKFILIGDSSVGKSSLLVRLTDDRFLADPDPTIGVEFGSHLIRLDNGETVKVQVWD 89
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAG E FR++TRSYYRGAAGAL+V DV+H
Sbjct: 90 TAGSESFRSITRSYYRGAAGALLVYDVTH 118
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
G Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK Q
Sbjct: 1 GSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 60
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IWDTAG ER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IWDTAGLERYRAITSAYYRGAVGALLVYDIA 91
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
G Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 GSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 35
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 66/87 (75%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD GVGKS LL +FT ++ + + T
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKST 41
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|301102718|ref|XP_002900446.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262102187|gb|EEY60239.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 87 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 146
KYIIIGD VGKS LL QFTEQ F P TIGVEFG +++EV G K+KL+IWDTAGQE
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHFQPIHDLTIGVEFGAKLLEVDGRKVKLEIWDTAGQE 65
Query: 147 RFRAVTRSYYRGAAGALMVIDVS 169
F ++TRSYYRGA GAL+V DVS
Sbjct: 66 TFLSITRSYYRGADGALLVYDVS 88
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 19/25 (76%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKY 40
KYIIIGD VGKS LL QFTEQ +
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHF 30
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 70/94 (74%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
S + + Y+FK +++GD VGKS LL +F +F P+ TIGVEF T+ ++++G+++K
Sbjct: 5 SEEEKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVK 64
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
QIWDTAGQERFRAVT +YYRGA GAL+V D+S
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISR 98
>gi|339252040|ref|XP_003371243.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316968547|gb|EFV52812.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 330
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 34 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTTIGVEFATRSIQVDGKTIKAQIWDT 93
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 94 AGQERYRAITSAYYRGAVGALLVYDIA 120
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y+FK ++IGD GVGKS LL +FT ++ L + T
Sbjct: 34 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTT 69
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 62 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 92
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 31
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 68/92 (73%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+ + +Y Y+FK ++IGD G GKS LL +FT +F + TIGVEF TR I V G+ +K
Sbjct: 220 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKA 279
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 280 QIWDTAGQERYRAITSAYYRGAVGALLVYDIA 311
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ + +Y Y+FK ++IGD G GKS LL +FT ++ L
Sbjct: 220 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSL 255
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
+S + Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ +K
Sbjct: 2 TSKEEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALVVYDIA 94
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+S + Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 2 TSKEEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|440302421|gb|ELP94734.1| GTP-binding protein YPTC4, putative [Entamoeba invadens IP1]
Length = 217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 75 MSSSG--QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHG 132
+SSS + + +IFKYIIIG++ VGKSCLL Q+ + +F P TIGVEFGT+ + +
Sbjct: 27 ISSSAIVEPTIDHIFKYIIIGEVSVGKSCLLLQYEDHRFQPIYDLTIGVEFGTKNVRIQD 86
Query: 133 EKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
+KLQ+WDTAG ERFR++TRSYYRGA G +MV DVS
Sbjct: 87 TTVKLQLWDTAGSERFRSITRSYYRGAVGVIMVYDVSR 124
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 2 KTMSSSG--QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T+SSS + + +IFKYIIIG++ VGKSCLL Q+ + ++
Sbjct: 25 NTISSSAIVEPTIDHIFKYIIIGEVSVGKSCLLLQYEDHRF 65
>gi|348671985|gb|EGZ11805.1| hypothetical protein PHYSODRAFT_355097 [Phytophthora sojae]
Length = 207
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 87 FKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDTAGQE 146
KYIIIGD VGKS LL QFTEQ F P TIGVEFG +++EV G K+KL+IWDTAGQE
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHFQPIHDLTIGVEFGAKLLEVDGRKVKLEIWDTAGQE 65
Query: 147 RFRAVTRSYYRGAAGALMVIDVS 169
F ++TRSYYRGA GAL+V DVS
Sbjct: 66 TFLSITRSYYRGADGALLVYDVS 88
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 19/25 (76%)
Query: 16 FKYIIIGDMGVGKSCLLHQFTEQKY 40
KYIIIGD VGKS LL QFTEQ +
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHF 30
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS-HV 171
AGQER+RA+T +YYRGA GAL+V D++ HV
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHV 97
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|71022257|ref|XP_761359.1| hypothetical protein UM05212.1 [Ustilago maydis 521]
gi|46097667|gb|EAK82900.1| hypothetical protein UM05212.1 [Ustilago maydis 521]
Length = 347
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEV-HGEKIKLQIWD 141
+ YI K+I+IGD VGKS LL + T+ +F+ D TIGVEFG+ +I + +GE +K+Q+WD
Sbjct: 30 WDYILKFILIGDSSVGKSSLLVRLTDDRFLTDPDPTIGVEFGSHLIRLDNGETVKVQVWD 89
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAG E FR++TRSYYRGAAGAL+V DV+H
Sbjct: 90 TAGSESFRSITRSYYRGAAGALLVYDVTH 118
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++ G+
Sbjct: 1 MSVRPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKV 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 95
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
MS Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MSVRPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNL 39
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR +++ G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVFDIT 95
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|158343289|gb|ABW35317.1| Rab1B [Gymnochlora stellata]
Length = 206
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKSCLL +F +Q + P+ TIGV+F R I++ G+ IKLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADQTYTPNYISTIGVDFKIRTIDLDGKTIKLQIWDT 69
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSHV 171
AGQERFR +T SYYRGA G ++V DV+ +
Sbjct: 70 AGQERFRTITSSYYRGAHGIIVVYDVTDI 98
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y Y+FK ++IGD GVGKSCLL +F +Q Y
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADQTY 38
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
++ Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I V G+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIA 93
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
++ Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 37
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 66/89 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + +H + +K QIWD
Sbjct: 7 DYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQIWD 66
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 TAGQERYRAITSAYYRGAVGALIVYDVTR 95
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 DYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|340960222|gb|EGS21403.1| hypothetical protein CTHT_0032610 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 174
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MSSS + +Y ++ K ++IGD GVGKSC L +F+E F P TIG++F R IE+ G++
Sbjct: 1 MSSSNR-NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKR 59
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
+KLQIWDTAGQERFR +T +YYRGA G L+V DV+ +
Sbjct: 60 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDER 97
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
MSSS + +Y ++ K ++IGD GVGKSC L +F+E +
Sbjct: 1 MSSSNR-NYDFLIKLLLIGDSGVGKSCCLLRFSEDSF 36
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWD
Sbjct: 41 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 100
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIA 128
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 41 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 72
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 65/87 (74%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD G GKS LL +FT +F D TIGVEF TR I+V + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDIS 92
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y ++FK ++IGD G GKS LL +FT ++ L + T
Sbjct: 6 YDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKST 41
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + V G+ +K Q
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQ 65
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT+ ++ L
Sbjct: 6 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSL 40
>gi|145521947|ref|XP_001446823.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834418|emb|CAI44541.1| rab_B18 [Paramecium tetraurelia]
gi|124414312|emb|CAK79426.1| unnamed protein product [Paramecium tetraurelia]
Length = 217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 71/87 (81%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FKYII+GD VGKSC+L +TE+KF D TIGVEFG+++++++ + IK+QIWDT
Sbjct: 4 YHFLFKYIIVGDTSVGKSCILLNYTEKKFNEDHETTIGVEFGSQLLKINDKTIKIQIWDT 63
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQE FR++TRSYY+G+ G ++V D++
Sbjct: 64 AGQESFRSITRSYYKGSIGVVLVFDLT 90
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
Y ++FKYII+GD VGKSC+L +TE+K+
Sbjct: 4 YHFLFKYIIVGDTSVGKSCILLNYTEKKF 32
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ +K Q
Sbjct: 7 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQ 66
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 98
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 41
>gi|74833808|emb|CAI39364.1| rab_A39 [Paramecium tetraurelia]
Length = 222
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 67/89 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+YS +FKYIIIGD GVGKS +L Q E + TIGVEFG +II+V+G IKLQIWD
Sbjct: 3 NYSLMFKYIIIGDTGVGKSSILLQLIENEIREQHDATIGVEFGAKIIKVNGMNIKLQIWD 62
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++ RSYYR A GAL+V D+++
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITN 91
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQK 39
+YS +FKYIIIGD GVGKS +L Q E +
Sbjct: 3 NYSLMFKYIIIGDTGVGKSSILLQLIENE 31
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 68/91 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FK ++IGD GVGK+CLL +F E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 SYDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G L+V ++++ K
Sbjct: 64 TAGQERFRTITNAYYRGAMGILLVYEITNEK 94
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY ++FK ++IGD GVGK+CLL +F E +
Sbjct: 4 SYDFLFKLLLIGDSGVGKTCLLFRFAEDSF 33
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+F+ ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+F+ ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFRVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 69/95 (72%)
Query: 78 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKL 137
+G +Y ++ K ++IGD GVGKSC L +F+E F P TIG++F R IE+ G+++KL
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKL 61
Query: 138 QIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
QIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 96
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 7 SGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+G +Y ++ K ++IGD GVGKSC L +F+E +
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF 35
>gi|262400949|gb|ACY66377.1| RAB11a member RAS oncogene family [Scylla paramamosain]
Length = 91
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMV 165
AGQER+RA+T +YYRGA GAL+V
Sbjct: 68 AGQERYRAITSAYYRGAVGALLV 90
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|149028911|gb|EDL84252.1| RAB8B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 175
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y Y+FK ++IGD GVGK+CLL +F+E F TIG++F R IE+ G+KIKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G ++V D+++ K
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEK 94
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y Y+FK ++IGD GVGK+CLL +F+E +
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF 33
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQIWDT 68
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 68/92 (73%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G+ +K Q
Sbjct: 7 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQ 66
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 98
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 7 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 41
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%)
Query: 79 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQ 138
+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR + V G+ IK Q
Sbjct: 69 AEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQ 128
Query: 139 IWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
IWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 129 IWDTAGQERYRAITSAYYRGAVGALLVYDVTR 160
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 8 GQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 69 AEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSL 103
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y ++FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y ++FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>gi|401842530|gb|EJT44700.1| SEC4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 115
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 72 VSKMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVH 131
VS S +G+ SY I K ++IGD GVGKSCLL +F E KF P TIG++F + ++++
Sbjct: 7 VSASSGNGK-SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN 65
Query: 132 GEKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
G+K+KLQ+WDTAGQERFR +T +YYRGA G ++V DV+
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTD 104
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 5 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SS SY I K ++IGD GVGKSCLL +F E K+
Sbjct: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKF 45
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%)
Query: 80 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQI 139
+ YSY+FK ++IGD GVGKS +L +FT F D TIGVEF T+ +++ G+ IK QI
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQI 65
Query: 140 WDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 9 QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+ YSY+FK ++IGD GVGKS +L +FT + L + T
Sbjct: 6 DHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKST 44
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,561,772,722
Number of Sequences: 23463169
Number of extensions: 98436231
Number of successful extensions: 421112
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13499
Number of HSP's successfully gapped in prelim test: 7501
Number of HSP's that attempted gapping in prelim test: 383936
Number of HSP's gapped (non-prelim): 36636
length of query: 173
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 41
effective length of database: 9,262,057,059
effective search space: 379744339419
effective search space used: 379744339419
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)