BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13826
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 88/94 (93%)
Query: 77 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIK 136
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIK
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 61
Query: 137 LQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
LQIWDTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 6 SSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
++ Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 2 ATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 86/90 (95%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIW
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 86/90 (95%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+KFM DCPHTIGVEFGTRIIEV G+KIKLQIW
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIW 65
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGALMV D++
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGALMVYDITR 95
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYF 41
Y+YSYIFKYIIIGDMGVGKSCLLHQFTE+K+
Sbjct: 6 YNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFM 37
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 83/90 (92%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
+ Y YIFKYIIIGDMGVGKSCLLHQFTE KF+PD PHTIGVEFGTRI++V+ +KIKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVSH 170
DTAGQERFRAVTRSYYRGAAGAL+V D++
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITR 92
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+ Y YIFKYIIIGDMGVGKSCLLHQFTE K+
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKF 33
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E+KF D HTIGVEFG++II V G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDIT 96
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+K+
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKF 38
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG G GKSCLLHQF E K+
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKF 33
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 75/88 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y ++FK+++IG+ G GKSCLLHQF E++F D HTIGVEFG++II V + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQERFR+VTRSYYRGAAGAL+V D++
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIT 91
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y ++FK+++IG+ G GKSCLLHQF E+++
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRF 33
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 76/89 (85%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ + G++IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 76/88 (86%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
+Y+Y+FKYIIIGD GVGKSCLL QFT+++F P T+GVEFG R+I + G++IKLQIWD
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
+Y+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 73/89 (82%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R++ V G IKLQIWD
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITR 90
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 74/88 (84%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y+FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVS 169
TAGQE FR++TRSYYRGAAGAL+V D++
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDIT 89
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y+FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRF 31
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 73/88 (82%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
YS++FKYIIIGD GVGKSCLL QFT+++F P TIGVEFG R+I + + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQE FR++TRSYYRG+AGAL+V D++
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITR 89
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 27/29 (93%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
YS++FKYIIIGD GVGKSCLL QFT++++
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRF 30
>sp|P51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
Length = 222
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV +KIK QIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y Y+FK ++IGD GVGKS LL +FT ++ +
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNI 40
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 81 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIW 140
Y Y +FK ++IGD GVGKS LL +FT+ +F D TIGVEF TR +E+ G++IK QIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 141 DTAGQERFRAVTRSYYRGAAGALMVIDVS 169
DTAGQER+RA+T +YYRGA GAL+V D+S
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDIS 96
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 10 YSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
Y Y +FK ++IGD GVGKS LL +FT+ ++ + + T
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKST 45
>sp|Q9GP33|RAB4A_ECHMU Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis
PE=2 SV=1
Length = 223
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 70/88 (79%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
+ Y+FK++IIG+ G GK+C+L ++TE+KF P+ HTIG EFG+R+I V G +K+QIWDT
Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDT 65
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVSH 170
AGQERFR++ RSYY A G L+V D+++
Sbjct: 66 AGQERFRSMARSYYHDAVGTLLVYDITN 93
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
+ Y+FK++IIG+ G GK+C+L ++TE+K+F Q T
Sbjct: 6 FDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHT 41
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 72/89 (80%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY ++FKYI++GD VGKS LL QF +++F P+ TIGVEFG+R I ++ ++IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE+FR++TR+YYRGA A++V D++
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITR 108
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 3 TMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
T + SY ++FKYI++GD VGKS LL QF ++++
Sbjct: 12 TFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRF 49
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY+Y FKYIIIGD GVGKSCLL +FT+++F TIGVEFG + I + + IKLQIWD
Sbjct: 2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWD 61
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSH 170
TAGQE FR+VTRSYYRG AG L+V D++
Sbjct: 62 TAGQESFRSVTRSYYRGRAGTLLVYDITR 90
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY+Y FKYIIIGD GVGKSCLL +FT++++
Sbjct: 2 SYAYRFKYIIIGDTGVGKSCLLLKFTDKRF 31
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 71/97 (73%)
Query: 76 SSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKI 135
+++ +Y Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++I
Sbjct: 5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 64
Query: 136 KLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
KLQIWDTAGQERFR +T +YYRGA G L+V DV+ K
Sbjct: 65 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEK 101
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 1 MKTMSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
M + +++ +Y Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 40
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M+ Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR ++V G
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V DV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVT 95
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M+ Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCL 39
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 75 MSSSG-QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGE 133
M+S G Q Y Y++K ++IGD GVGKS LL +FT +F + TIGVEF TR I+ G+
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 134 KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK Q+WDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIA 96
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 4 MSSSG-QYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFLGLQLT 47
M+S G Q Y Y++K ++IGD GVGKS LL +FT ++ L + T
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKST 45
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
MS Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
IK QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
MS Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL 39
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 82 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWD 141
SY Y+ K ++IGD GVGKSCLL +F+E F P TIG++F R IE+ G++IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 142 TAGQERFRAVTRSYYRGAAGALMVIDVSHVK 172
TAGQERFR +T +YYRGA G L++ DV+ K
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKK 95
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 11 SYSYIFKYIIIGDMGVGKSCLLHQFTEQKY 40
SY Y+ K ++IGD GVGKSCLL +F+E +
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSF 34
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 75 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEK 134
M++ + Y Y+FK ++IGD GVGKS +L +FT +F + TIGVEF TR ++V G+
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 135 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVIDVS 169
+K QIWDTAGQER+RA+T +YYRGA GAL+V D++
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 MSSSGQYSYSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
M++ + Y Y+FK ++IGD GVGKS +L +FT ++ L
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL 39
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 67/87 (77%)
Query: 83 YSYIFKYIIIGDMGVGKSCLLHQFTEQKFMPDCPHTIGVEFGTRIIEVHGEKIKLQIWDT 142
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V G+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 143 AGQERFRAVTRSYYRGAAGALMVIDVS 169
AGQER+RA+T +YYRGA GAL+V D++
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIA 94
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 12 YSYIFKYIIIGDMGVGKSCLLHQFTEQKYFL 42
Y Y+FK ++IGD GVGKS LL +FT ++ L
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL 38
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,783,454
Number of Sequences: 539616
Number of extensions: 2345996
Number of successful extensions: 13002
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 10809
Number of HSP's gapped (non-prelim): 2030
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)