Query psy13831
Match_columns 82
No_of_seqs 105 out of 515
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 21:35:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cip_G Gelsolin; actin, dictyo 100.0 7.7E-34 2.6E-38 187.3 10.7 79 3-81 45-125 (128)
2 2vik_A Villin 14T; actin-bindi 100.0 4.8E-34 1.6E-38 187.9 8.7 79 3-81 43-122 (126)
3 2ff3_A Gelsolin; protein-prote 100.0 4.5E-33 1.6E-37 188.1 11.0 79 3-81 64-144 (150)
4 1t44_G Chimera of gelsolin dom 100.0 8.4E-33 2.9E-37 186.0 11.0 79 3-81 42-122 (147)
5 3tu5_B Gelsolin, protein cordo 100.0 1.8E-30 6.2E-35 190.6 11.3 80 2-81 59-140 (297)
6 2fh1_A Gelsolin; calcium, cont 100.0 1.3E-28 4.6E-33 181.5 12.1 80 2-81 33-114 (344)
7 1j72_A Macrophage capping prot 100.0 7.3E-29 2.5E-33 182.5 10.5 77 2-81 45-122 (347)
8 3fg6_A Adseverin, scinderin; C 100.0 3E-28 1E-32 182.1 10.0 76 2-81 78-155 (371)
9 1d0n_A Horse plasma gelsolin; 99.9 6.6E-28 2.3E-32 192.0 11.6 79 3-81 40-120 (729)
10 3fg7_A Villin-1; actin binding 99.9 1E-29 3.5E-34 191.7 0.0 79 3-81 89-168 (398)
11 1d0n_A Horse plasma gelsolin; 99.9 1.5E-27 5.1E-32 189.9 11.6 80 3-82 419-500 (729)
12 1j72_A Macrophage capping prot 99.2 1.7E-11 5.7E-16 89.9 6.5 71 2-79 162-233 (347)
13 1kcq_A Gelsolin, brevin, ADF, 99.2 1.4E-10 4.9E-15 72.6 8.0 63 3-72 30-93 (104)
14 1svq_A Severin; actin-binding; 99.0 6.3E-10 2.1E-14 70.9 7.1 63 3-72 40-104 (114)
15 3fg7_A Villin-1; actin binding 98.6 1.3E-07 4.3E-12 71.2 8.0 63 2-71 311-377 (398)
16 3fg6_A Adseverin, scinderin; C 98.6 3.4E-08 1.2E-12 73.6 4.8 62 3-71 300-365 (371)
17 2fh1_A Gelsolin; calcium, cont 98.6 1.6E-07 5.4E-12 68.9 7.2 62 3-71 259-324 (344)
18 1x67_A Drebrin-like protein; c 96.2 0.046 1.6E-06 35.3 8.7 59 4-65 70-130 (146)
19 1cfy_A Cofilin; actin-binding, 95.5 0.088 3E-06 33.5 7.7 58 4-64 63-126 (143)
20 1f7s_A Actin depolymerizing fa 95.4 0.078 2.7E-06 33.7 7.1 58 4-64 66-128 (139)
21 1cnu_A Actophorin, ADF, cofili 95.0 0.19 6.5E-06 31.6 7.9 58 4-64 61-122 (137)
22 2xfa_A Actin depolymerization 94.9 0.22 7.6E-06 31.9 8.1 49 4-52 73-126 (148)
23 2i2q_A Cofilin; N-terminal ser 94.7 0.32 1.1E-05 30.6 8.4 59 4-65 63-125 (137)
24 1m4j_A A6 gene product, twinfi 94.6 0.23 7.7E-06 31.7 7.6 60 4-64 67-128 (142)
25 1hqz_1 ABP1P, actin-binding pr 94.6 0.22 7.4E-06 31.6 7.4 58 4-64 65-125 (141)
26 1tvj_A Cofilin; ADF, actin bin 94.4 0.45 1.5E-05 31.3 8.9 59 4-65 81-143 (166)
27 2vac_A Twinfilin-2; transferas 94.3 0.19 6.7E-06 31.7 6.6 60 4-64 64-125 (134)
28 2kd5_A ADF H, actin severing a 94.2 0.059 2E-06 34.6 4.1 57 4-64 63-123 (144)
29 2kvk_A Actin severing and dyna 93.7 0.33 1.1E-05 31.1 7.0 57 4-64 63-123 (144)
30 3q2b_A Pfadf1, cofilin/actin-d 93.3 0.29 9.8E-06 30.8 6.1 56 4-65 65-120 (124)
31 2lj8_A Cofilin/actin depolymer 92.6 0.87 3E-05 29.1 7.8 57 4-64 70-130 (144)
32 2l72_A Tgadf, actin depolymeri 90.8 1.5 5.1E-05 28.1 7.3 45 4-52 80-124 (139)
33 2w0i_A Twinfilin-2; cytoskelet 88.6 1.1 3.9E-05 28.1 5.4 60 4-64 57-124 (135)
34 1v6f_A MGMF-beta, GLIA maturat 86.8 3.8 0.00013 26.2 7.2 57 4-64 73-134 (151)
35 1t3y_A Coactosin-like protein; 86.6 4.5 0.00015 25.6 7.6 50 5-54 58-111 (141)
36 1ak6_A Destrin; actin depolyme 86.5 1.6 5.4E-05 28.8 5.3 46 4-49 90-139 (174)
37 1vkk_A GMF-gamma, GLIA maturat 85.0 3.2 0.00011 26.8 6.2 45 4-48 79-128 (154)
38 2d8b_A Twinfilin-1; cell-free 84.1 4.7 0.00016 26.3 6.7 45 4-48 82-131 (166)
39 3daw_B Twinfilin-1, protein A6 83.6 2.5 8.6E-05 27.7 5.2 60 4-64 77-144 (164)
40 3fmb_A Dimeric protein of unkn 37.7 63 0.0022 19.6 4.5 31 12-42 17-47 (118)
41 2opa_A Probable tautomerase YW 27.8 66 0.0023 16.3 4.0 32 19-51 4-35 (61)
42 2ph7_A Uncharacterized protein 27.2 1.4E+02 0.0049 21.0 5.3 42 28-70 145-186 (246)
43 1otf_A 4-oxalocrotonate tautom 25.4 74 0.0025 16.1 4.0 32 19-51 4-35 (62)
44 2gkp_A Hypothetical protein NM 25.1 95 0.0033 20.6 4.0 21 22-42 144-164 (167)
45 4ds1_A Dynein light chain 1, c 23.3 81 0.0028 18.7 3.1 41 31-72 42-88 (97)
46 4ekx_C 14L protein; binding pr 21.4 25 0.00085 22.1 0.5 16 17-32 32-47 (116)
47 1yo3_A Dynein light chain 1; s 20.4 1.3E+02 0.0045 18.0 3.7 41 31-72 47-93 (102)
48 1gcc_A Ethylene responsive ele 20.4 54 0.0018 18.0 1.7 20 21-40 27-46 (63)
No 1
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=7.7e-34 Score=187.31 Aligned_cols=79 Identities=46% Similarity=0.847 Sum_probs=73.9
Q ss_pred Ccee-eeeeeeC-CceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEeccc
Q psy13831 3 DAFT-FQPYKVY-GTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVL 80 (82)
Q Consensus 3 ~~~~-~yty~~~-~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~ 80 (82)
|||| +|||... ++..++||||+|++||+||+++||++|++||++|++.|+|+||+||+||+|||+||+++|+|++|+.
T Consensus 45 d~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~ 124 (128)
T 3cip_G 45 DAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGV 124 (128)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESCCC
T ss_pred CeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHHHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhCCCeEEEECCc
Confidence 8987 6888654 5789999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy13831 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 125 ~ 125 (128)
T 3cip_G 125 A 125 (128)
T ss_dssp C
T ss_pred C
Confidence 5
No 2
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=4.8e-34 Score=187.87 Aligned_cols=79 Identities=43% Similarity=0.744 Sum_probs=74.8
Q ss_pred Ccee-eeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEecccC
Q psy13831 3 DAFT-FQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVLT 81 (82)
Q Consensus 3 ~~~~-~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~~ 81 (82)
|||| +|||...++..++||||+|++||+||+++||++|++||++|++.|+|+||+||+||+|||+||+++|+|++|+.+
T Consensus 43 d~YIvl~t~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~ 122 (126)
T 2vik_A 43 DCYVLLSTRKTGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVA 122 (126)
T ss_dssp SCEEEEEEEECSSSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTSCSCEEEEETTTSHHHHHHHCSSCCCCCCSCTT
T ss_pred CeEEEEEeccCCCceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCccEEEEECCCCCHHHHHHcCCCeEEEECccc
Confidence 8886 577877888999999999999999999999999999999999999999999999999999999999999999975
No 3
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=4.5e-33 Score=188.10 Aligned_cols=79 Identities=46% Similarity=0.847 Sum_probs=74.2
Q ss_pred Ccee-eeeeeeC-CceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEeccc
Q psy13831 3 DAFT-FQPYKVY-GTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVL 80 (82)
Q Consensus 3 ~~~~-~yty~~~-~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~ 80 (82)
|||| +|||... ++..++||||+|++||+||+++||++|++||+.|++.|+|+||+||+||++||+||+++|+|++|+.
T Consensus 64 D~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~gaAA~~aveLd~~lgg~~vQ~Re~QG~Ep~~Fl~lFkg~iii~~GG~ 143 (150)
T 2ff3_A 64 DAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGV 143 (150)
T ss_dssp SEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHHTCTTCCEEESCCC
T ss_pred CeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhcCCeEEEeCCc
Confidence 8998 7888654 5789999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy13831 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 144 ~ 144 (150)
T 2ff3_A 144 A 144 (150)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=8.4e-33 Score=185.97 Aligned_cols=79 Identities=46% Similarity=0.847 Sum_probs=73.7
Q ss_pred Ccee-eeeeeeC-CceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEeccc
Q psy13831 3 DAFT-FQPYKVY-GTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVL 80 (82)
Q Consensus 3 ~~~~-~yty~~~-~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~ 80 (82)
|||| +|||... ++..++||||+|++||+||+++||++|++||++|++.|+|+||+||+||+|||+||+++|+|++|+.
T Consensus 42 d~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~Ep~~Fl~~F~~~iii~~Gg~ 121 (147)
T 1t44_G 42 DAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGV 121 (147)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCCC
T ss_pred CeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEECCCCCHHHHHHhCCCeEEEeCCc
Confidence 8987 6788554 5788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy13831 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 122 ~ 122 (147)
T 1t44_G 122 A 122 (147)
T ss_dssp C
T ss_pred c
Confidence 5
No 5
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=190.57 Aligned_cols=80 Identities=45% Similarity=0.826 Sum_probs=74.2
Q ss_pred CCceee-eeeeeC-CceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEecc
Q psy13831 2 PDAFTF-QPYKVY-GTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKV 79 (82)
Q Consensus 2 ~~~~~~-yty~~~-~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~ 79 (82)
-||||+ |||..+ ++..++||||+|++||+||+++||++|++||+.|+|.+||+||+||+||++||+||+++|+|++||
T Consensus 59 gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~Qg~Es~~Fl~~F~~~i~~~~GG 138 (297)
T 3tu5_B 59 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGG 138 (297)
T ss_dssp TCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESCC
T ss_pred CCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEeCCcCCHHHHHHhccCcEEecCC
Confidence 389965 788764 478899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC
Q psy13831 80 LT 81 (82)
Q Consensus 80 ~~ 81 (82)
..
T Consensus 139 ~~ 140 (297)
T 3tu5_B 139 VA 140 (297)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 6
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=99.96 E-value=1.3e-28 Score=181.51 Aligned_cols=80 Identities=30% Similarity=0.443 Sum_probs=75.4
Q ss_pred CCceee-eeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCC-EEEEecc
Q psy13831 2 PDAFTF-QPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNG-ISYHRKV 79 (82)
Q Consensus 2 ~~~~~~-yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~-~ii~~G~ 79 (82)
-||||+ |||..+++..+.||||+|++||+||+++||++|++||++++|.|+|+||+||+||++||++|+|+ +||++|+
T Consensus 33 gD~YIvl~ty~~~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg 112 (344)
T 2fh1_A 33 GDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGG 112 (344)
T ss_dssp TSEEEEEEEEEETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCSEEEEEETTCCCHHHHGGGTTCCEEEESCC
T ss_pred CCeEEEEEEeecCCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHhCCCceEEEeecCCCCHHHHHhhCCCeEEEEcCC
Confidence 389986 99999999999999999999999999999999999999999999999999999999999999997 8999986
Q ss_pred cC
Q psy13831 80 LT 81 (82)
Q Consensus 80 ~~ 81 (82)
.+
T Consensus 113 ~~ 114 (344)
T 2fh1_A 113 TS 114 (344)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 7
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=99.96 E-value=7.3e-29 Score=182.53 Aligned_cols=77 Identities=40% Similarity=0.708 Sum_probs=71.3
Q ss_pred CCceee-eeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEeccc
Q psy13831 2 PDAFTF-QPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVL 80 (82)
Q Consensus 2 ~~~~~~-yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~ 80 (82)
-||||+ |||..++ ++||||+|++||+||+++||++|++||+.|+|.|+|+||+||+||++||++|+++|+|++|++
T Consensus 45 gd~Yivl~t~~~~~---~~i~~W~G~~ss~de~~~aa~~t~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~ 121 (347)
T 1j72_A 45 GDSYLVLHNGPEEV---SHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGV 121 (347)
T ss_dssp TSEEEEEEECSSSC---EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCSEEEEEETTSCCHHHHTTCSSCCEEECSSC
T ss_pred CCEEEEEEeecCCC---eEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEeeCCCCCHHHHHhhCCCeEEeeCCc
Confidence 389986 7776444 999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q psy13831 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 122 ~ 122 (347)
T 1j72_A 122 E 122 (347)
T ss_dssp C
T ss_pred c
Confidence 4
No 8
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=182.07 Aligned_cols=76 Identities=30% Similarity=0.477 Sum_probs=66.7
Q ss_pred CCceee-eeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCC-EEEEecc
Q psy13831 2 PDAFTF-QPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNG-ISYHRKV 79 (82)
Q Consensus 2 ~~~~~~-yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~-~ii~~G~ 79 (82)
-||||+ ||| +..++||||+|++||+||+++||++|++||++|+|.|+|+||+||+||++||++|+++ |||++|+
T Consensus 78 gD~YIvl~ty----~~~~~i~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg 153 (371)
T 3fg6_A 78 GDCYIILYTY----PRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNG 153 (371)
T ss_dssp TCEEEEEEEC----SSCEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC---
T ss_pred CceEEEEEEe----cCCeEEEEeeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCC
Confidence 389976 677 4569999999999999999999999999999999999999999999999999999998 9999998
Q ss_pred cC
Q psy13831 80 LT 81 (82)
Q Consensus 80 ~~ 81 (82)
.+
T Consensus 154 ~~ 155 (371)
T 3fg6_A 154 TS 155 (371)
T ss_dssp --
T ss_pred cc
Confidence 64
No 9
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=99.95 E-value=6.6e-28 Score=191.97 Aligned_cols=79 Identities=46% Similarity=0.844 Sum_probs=73.3
Q ss_pred Ccee-eeeeee-CCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEeccc
Q psy13831 3 DAFT-FQPYKV-YGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVL 80 (82)
Q Consensus 3 ~~~~-~yty~~-~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~ 80 (82)
|||| +|||.. .++..++||||+|++||+||+++||++|++||++|+|.|+|+||+||+||+|||+||+++|+|++|+.
T Consensus 40 dsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tveLd~~lgg~~vq~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~ 119 (729)
T 1d0n_A 40 DAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGV 119 (729)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHHTCSSCEEEESCCT
T ss_pred CEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEecCCCCHHHHHhccCCcEEeeCCc
Confidence 8886 577865 55679999999999999999999999999999999999999999999999999999999999999996
Q ss_pred C
Q psy13831 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
+
T Consensus 120 ~ 120 (729)
T 1d0n_A 120 A 120 (729)
T ss_dssp T
T ss_pred c
Confidence 4
No 10
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=99.95 E-value=1e-29 Score=191.73 Aligned_cols=79 Identities=28% Similarity=0.413 Sum_probs=0.0
Q ss_pred Cceee-eeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCCEEEEecccC
Q psy13831 3 DAFTF-QPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKVLT 81 (82)
Q Consensus 3 ~~~~~-yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~~~ 81 (82)
||||+ |||..+++..++||||+|++||+||+++||++|++||+.|+|.|+|+||+||+||++||++|+|+|||++|+++
T Consensus 89 D~YIvl~ty~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~QG~Es~~Fls~Fkg~iii~~Gg~~ 168 (398)
T 3fg7_A 89 DCYLLLYTYLIGEKQHYLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTS 168 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEEEEecCCcceEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeecCCCCHHHHHHhCCeEEEeeCCcc
Confidence 89875 78888888999999999999999999999999999999999999999999999999999999999999999975
No 11
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=99.95 E-value=1.5e-27 Score=189.94 Aligned_cols=80 Identities=29% Similarity=0.429 Sum_probs=76.2
Q ss_pred Ccee-eeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhcccCC-EEEEeccc
Q psy13831 3 DAFT-FQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFKNG-ISYHRKVL 80 (82)
Q Consensus 3 ~~~~-~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~-~ii~~G~~ 80 (82)
|||| +|||..+++..++||||+|++||+||+++||++|++||+.|++.|+|+||+||+||+|||++|+|+ |+|++|++
T Consensus 419 d~Yivl~ty~~~g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~R~~Qg~E~~~Fl~~F~g~~~ii~~Gg~ 498 (729)
T 1d0n_A 419 DSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIVYKGGT 498 (729)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEEEEETTCCCHHHHTTSTTSCEEEESSCC
T ss_pred cEEEEEEEEecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEEecccCCCCHHHHHhcCCCeEEEEeCCc
Confidence 8886 589988999999999999999999999999999999999999999999999999999999999999 99999997
Q ss_pred CC
Q psy13831 81 TH 82 (82)
Q Consensus 81 ~~ 82 (82)
++
T Consensus 499 ~~ 500 (729)
T 1d0n_A 499 SR 500 (729)
T ss_dssp CS
T ss_pred cc
Confidence 63
No 12
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=99.22 E-value=1.7e-11 Score=89.94 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=60.3
Q ss_pred CCceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHH-HHHcCCCCeEEEeecCCCChhHHhcccCCEEEEecc
Q psy13831 2 PDAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVEL-DNYLNGSPVQHREVQGGESIRFRGYFKNGISYHRKV 79 (82)
Q Consensus 2 ~~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l-d~~l~~~~vq~Rv~QGkEp~~Fl~lFkg~~ii~~G~ 79 (82)
-|||||-+ ...||.|+|+.|+.+|+..|+..|..| ++..++.+..+++.||+||+.|+++|+|+..+.+|.
T Consensus 162 ~d~FIL~~-------~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~E~~~Fw~~LGg~~~~~~~~ 233 (347)
T 1j72_A 162 GDCFILDL-------GQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGN 233 (347)
T ss_dssp TSEEEEEE-------TTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTCCCHHHHHHHCSCCCCBCSC
T ss_pred CceEEEec-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCCCHHHHHHHhCCCcccccCC
Confidence 38999953 236999999999999999999999999 456778888889999999999999999876666654
No 13
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.17 E-value=1.4e-10 Score=72.62 Aligned_cols=63 Identities=22% Similarity=0.265 Sum_probs=52.3
Q ss_pred CceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHH-HcCCCCeEEEeecCCCChhHHhcccCC
Q psy13831 3 DAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDN-YLNGSPVQHREVQGGESIRFRGYFKNG 72 (82)
Q Consensus 3 ~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~-~l~~~~vq~Rv~QGkEp~~Fl~lFkg~ 72 (82)
|||||-+= ..||.|+|+.|+.+|+..|...|..+.+ ..++.+....+.||+||+.|...|+|+
T Consensus 30 d~FILd~g-------~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG~E~~~Fw~~LGg~ 93 (104)
T 1kcq_A 30 DCFILDLG-------NNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPK 93 (104)
T ss_dssp SEEEEECS-------SEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETTCCCHHHHHHHCSC
T ss_pred CeEEEeCC-------CEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCCCCCHHHHHHcCCC
Confidence 89999541 2699999999999999999999999853 455666556678999999999999875
No 14
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.04 E-value=6.3e-10 Score=70.92 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=51.8
Q ss_pred CceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCC--CChhHHhcccCC
Q psy13831 3 DAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGG--ESIRFRGYFKNG 72 (82)
Q Consensus 3 ~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGk--Ep~~Fl~lFkg~ 72 (82)
|||||-+= ..||.|+|+.|+.+|+..|...|..|+..-++.+...-+.+|. ||+.|..+|+|+
T Consensus 40 D~FILd~g-------~~iyvW~G~~ss~~Ek~~A~~~a~~i~~er~g~~~i~vv~eg~~~E~~~Fw~~LGg~ 104 (114)
T 1svq_A 40 DCFLLDAG-------LTIYQFNGSKSSPQEKNKAAEVARAIDAERKGLPKVEVFCETDSDIPAEFWKLLGGK 104 (114)
T ss_dssp SEEEEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHTTCSEEEECCCCTTCCCHHHHHHHTC-
T ss_pred CeEEEecC-------CEEEEEeCCCCCHHHHHHHHHHHHHhhhccCCCccEEEEeCCCcCCcHHHHHHcCCC
Confidence 89999542 2599999999999999999999999976666666444466899 999999999874
No 15
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=98.61 E-value=1.3e-07 Score=71.23 Aligned_cols=63 Identities=27% Similarity=0.461 Sum_probs=50.9
Q ss_pred CCceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC-C---CCeEEEeecCCCChhHHhcccC
Q psy13831 2 PDAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLN-G---SPVQHREVQGGESIRFRGYFKN 71 (82)
Q Consensus 2 ~~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~-~---~~vq~Rv~QGkEp~~Fl~lFkg 71 (82)
.|||||=+. ..||.|+|++|+.+|+.+|...|.+.-.... + .+...++.||.||+.|.++|.+
T Consensus 311 ~dv~ILD~g-------~~IfVW~G~~as~~Er~~Al~~A~~yi~~~~~~r~~~tpi~~V~eG~Ep~~Fk~~F~~ 377 (398)
T 3fg7_A 311 DDVFLLDVW-------DQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGHEPPTFTGWFLA 377 (398)
T ss_dssp TSEEEEECS-------SCEEEEECTTCCHHHHHHHHHHHHHHHHHSSSSCCTTCCEEEEETTCCCHHHHTTSSC
T ss_pred CCEEEEeCC-------CEEEEEECCCCCHHHHHHHHHHHHHHHHhCcccCCCCCCEEEEcCCCCCHHHHHhhhc
Confidence 478887653 2599999999999999999999999877642 2 2234589999999999999974
No 16
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=98.61 E-value=3.4e-08 Score=73.57 Aligned_cols=62 Identities=21% Similarity=0.324 Sum_probs=47.5
Q ss_pred CceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC-C---CCeEEEeecCCCChhHHhcccC
Q psy13831 3 DAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLN-G---SPVQHREVQGGESIRFRGYFKN 71 (82)
Q Consensus 3 ~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~-~---~~vq~Rv~QGkEp~~Fl~lFkg 71 (82)
|||||=+. ..||.|+|++|+.+|+.+|...|.++-...+ + .+...++.||.||+.|.++|.+
T Consensus 300 dv~ILD~~-------~~IfVW~G~~as~~Er~~A~~~A~~yi~~~~~~r~~~t~i~~v~eG~Ep~~Fk~~F~~ 365 (371)
T 3fg6_A 300 DVMLLDAW-------EQIFIWIGKDANEVEKKESLKSAKMYLETDPSGRDKRTPIVIIKQGHEPPTFTGWFLG 365 (371)
T ss_dssp SEEEEECS-------SCEEEEECTTCCHHHHHHHHHHHTTCC----------CCEEEEETTCCCHHHHTTSSS
T ss_pred CEEEEeCC-------CEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCCCCEEEecCCCCCHHHHhhhcc
Confidence 67777543 3599999999999999999999988766542 2 2345789999999999999974
No 17
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=98.56 E-value=1.6e-07 Score=68.91 Aligned_cols=62 Identities=21% Similarity=0.332 Sum_probs=48.8
Q ss_pred CceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHc--C--CCCeEEEeecCCCChhHHhcccC
Q psy13831 3 DAFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYL--N--GSPVQHREVQGGESIRFRGYFKN 71 (82)
Q Consensus 3 ~~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l--~--~~~vq~Rv~QGkEp~~Fl~lFkg 71 (82)
|||||=+. ..||.|+|+.|+.+|+..|...|.++-... + ..+...++.||.||+.|.++|.+
T Consensus 259 dv~iLD~g-------~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~~r~~~t~i~~V~eG~Ep~~Fk~~F~~ 324 (344)
T 2fh1_A 259 DVMLLDTW-------DQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLG 324 (344)
T ss_dssp SEEEEECS-------SCEEEEECTTCCHHHHHHHHHHHHHHHHTC-------CCEEEEETTCCCHHHHTTSSS
T ss_pred CEEEEeCC-------CEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCCCcEEEEcCCCCCHHHHHHHhh
Confidence 66776332 349999999999999999999999987654 1 12345789999999999999985
No 18
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=96.23 E-value=0.046 Score=35.32 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=46.8
Q ss_pred ceeeeeeeeCC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhH
Q psy13831 4 AFTFQPYKVYG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRF 65 (82)
Q Consensus 4 ~~~~yty~~~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~F 65 (82)
+|.+|-+...+ +.+..+..|.|..++.-.+...|..-..|.+.|+| +++ ++|..++.++
T Consensus 70 ~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g--~~~-ei~at~~~el 130 (146)
T 1x67_A 70 MYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKG--AHV-TINARAEEDV 130 (146)
T ss_dssp EEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTT--EEE-EECCCSGGGG
T ss_pred EEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCC--cEE-EEEeCChHHC
Confidence 68888887554 34566677999999999999999999999999988 444 6777777653
No 19
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=95.54 E-value=0.088 Score=33.48 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=43.5
Q ss_pred ceeeeeeeeCC--c----eeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG--T----MEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~--~----~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|.... + .+..+.+|.+..++..++..-|..-..|.+.|+|-.+ ++|..++.+
T Consensus 63 rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~---~i~a~d~~e 126 (143)
T 1cfy_A 63 LYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST---DVQGTDFSE 126 (143)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE---EEEESSGGG
T ss_pred EEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceE---EEEeCChHH
Confidence 69999986422 2 4555678999999999999999888888888977443 456666554
No 20
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=95.44 E-value=0.078 Score=33.70 Aligned_cols=58 Identities=12% Similarity=0.196 Sum_probs=42.7
Q ss_pred ceeeeeeeeCC-----ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG-----TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~-----~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|...+ +.+..+.+|.+..++..++..-|..-..|.+.|++-.+ ++|..++.+
T Consensus 66 rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v---~i~a~d~~e 128 (139)
T 1f7s_A 66 RYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV---ELQATDPTE 128 (139)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE---EEEECCTTC
T ss_pred eEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE---EEEECChHH
Confidence 39999996422 24555678999999999999888888888888987544 455555543
No 21
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=94.98 E-value=0.19 Score=31.59 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=43.0
Q ss_pred ceeeeeeee--CC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKV--YG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~--~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|.. .+ +.+..+.+|.+..++..++..-|..-..|.+.++|-.+ ++|..++.+
T Consensus 61 rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~---~i~a~~~~e 122 (137)
T 1cnu_A 61 RYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQV---EVQATDAAE 122 (137)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCE---EEEECSTTT
T ss_pred eEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCceE---EEEECChHH
Confidence 689998854 22 24555678999999999999999888888888976433 456666544
No 22
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=94.89 E-value=0.22 Score=31.85 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=38.5
Q ss_pred ceeeeeeeeCC-----ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCe
Q psy13831 4 AFTFQPYKVYG-----TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPV 52 (82)
Q Consensus 4 ~~~~yty~~~~-----~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~v 52 (82)
+|++|.|...+ +.+..+.+|.+..|+..++..-|..-..|-+.|+|-.+
T Consensus 73 rY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~ 126 (148)
T 2xfa_A 73 RYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK 126 (148)
T ss_dssp EEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE
T ss_pred EEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE
Confidence 79999997633 23455568999999999999988888888888877444
No 23
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=94.70 E-value=0.32 Score=30.58 Aligned_cols=59 Identities=8% Similarity=0.088 Sum_probs=43.2
Q ss_pred ceeeeeeeeCC----ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhH
Q psy13831 4 AFTFQPYKVYG----TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRF 65 (82)
Q Consensus 4 ~~~~yty~~~~----~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~F 65 (82)
+|++|.|.... +.+..+.+|.+..++..++..-|..-..|-+.++|-. .++|..++.++
T Consensus 63 rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~---~~i~a~d~~el 125 (137)
T 2i2q_A 63 RYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIG---TDIQATDFSEV 125 (137)
T ss_dssp EEEEEEEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCC---EEEEECCCC--
T ss_pred eEEEEEeeeecCCCCccCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCce---EEEEECChHHc
Confidence 69999986532 2455567899999999999998888888888887633 25677776554
No 24
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=94.59 E-value=0.23 Score=31.66 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=44.8
Q ss_pred ceeeeeeeeCC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
||++|.|...+ +.+..+.+|.+..++...+..-|.--..|-+.|+|..+ ..++|..++.+
T Consensus 67 rY~~~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~e 128 (142)
T 1m4j_A 67 CYVLFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHI-KDEVFGTVKED 128 (142)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred eEEEEEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcee-EEEEEeCChHH
Confidence 79999996533 34556678999999999999888888888889988543 12456666654
No 25
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=94.58 E-value=0.22 Score=31.60 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=42.5
Q ss_pred ceeeeeeeeCC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHH-HcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDN-YLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~-~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|...| +.+..+.+|.|..++..++..-|..-..|.+ .|+|-.+ ++|..++.+
T Consensus 65 rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~---~i~a~~~~e 125 (141)
T 1hqz_1 65 QYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHV---QVTARDEDD 125 (141)
T ss_dssp EEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE---EEEESSGGG
T ss_pred EEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEE---EEEECChHH
Confidence 69999997554 3455567899999999999988887777876 8876444 445555543
No 26
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=94.43 E-value=0.45 Score=31.26 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=43.1
Q ss_pred ceeeeeee--e-CC-ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhH
Q psy13831 4 AFTFQPYK--V-YG-TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRF 65 (82)
Q Consensus 4 ~~~~yty~--~-~~-~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~F 65 (82)
||++|.|. . ++ +.+..+.+|.+..|+...+..-|.--..|-+.|+|-.. ++|..++.++
T Consensus 81 rY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~---~i~atd~~el 143 (166)
T 1tvj_A 81 RYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH---EWQVNGLDDI 143 (166)
T ss_dssp EEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC---EEEESSGGGT
T ss_pred EEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE---EEEECChHHc
Confidence 79999996 3 33 23445568999999999998888877888888987332 4566666554
No 27
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=94.26 E-value=0.19 Score=31.67 Aligned_cols=60 Identities=12% Similarity=0.140 Sum_probs=44.5
Q ss_pred ceeeeeeeeCC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
||++|.|...+ +.+..+.+|.+..|+...+..-|.--..|-+.|+|..+ ..++|..++.+
T Consensus 64 rY~v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~-~~~i~atd~~e 125 (134)
T 2vac_A 64 CYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHI-KDELFGTVKDD 125 (134)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGE-EEEEEESSHHH
T ss_pred EEEEEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCee-eEEEEeCChHH
Confidence 79999996533 44566678999999999998888887888889987443 12456666554
No 28
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=94.19 E-value=0.059 Score=34.61 Aligned_cols=57 Identities=9% Similarity=0.139 Sum_probs=42.2
Q ss_pred ceeeeeeeeCC----ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG----TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~----~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|...+ +.+..+.+|.+..++..++..-|..-..|-+.|+|- .++|..++.+
T Consensus 63 rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~----~~i~a~d~~e 123 (144)
T 2kd5_A 63 CYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY----LPIQANDESG 123 (144)
T ss_dssp EEEEEEEEEESSSCEEEEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS----EEEEESSSSS
T ss_pred EEEEEEEEecCCCCCccCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe----EEEEECChHH
Confidence 79999885432 345556789999999999998887777777788774 4556666654
No 29
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=93.69 E-value=0.33 Score=31.08 Aligned_cols=57 Identities=11% Similarity=0.186 Sum_probs=41.8
Q ss_pred ceeeeeeee--CCce--eEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKV--YGTM--EQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~--~~~~--~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
||++|.|.. .++. +..+.+|.+..++..++..-|..-..|.+.|++. .++|...+.+
T Consensus 63 rY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~~----~~i~a~d~~e 123 (144)
T 2kvk_A 63 CYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY----LPIQANDESG 123 (144)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTE----EEEEESSGGG
T ss_pred eEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCCE----EEEEECChHH
Confidence 699988743 3332 3445679999999999998888888888889872 3567666654
No 30
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=93.31 E-value=0.29 Score=30.81 Aligned_cols=56 Identities=9% Similarity=0.083 Sum_probs=42.4
Q ss_pred ceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhH
Q psy13831 4 AFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRF 65 (82)
Q Consensus 4 ~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~F 65 (82)
+|++|.| +....+.+|....|+..++-.=|.--..|-+.|+| +++.++|-.++.++
T Consensus 65 rY~vy~~----~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g--~~~~~i~a~d~~dl 120 (124)
T 3q2b_A 65 AYVVFDA----VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEG--VNVLTSVIESAQDV 120 (124)
T ss_dssp EEEEEEC----SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTT--SEECCSCBCSHHHH
T ss_pred EEEEEec----CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCC--CceEEEEecCHHHc
Confidence 5999988 45666778999999999997777666667777877 45567777776654
No 31
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=92.62 E-value=0.87 Score=29.11 Aligned_cols=57 Identities=7% Similarity=0.074 Sum_probs=41.4
Q ss_pred ceeeeeeeeCC---c-eeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKVYG---T-MEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~~~---~-~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|.+|.|.... . .+..+.+|.+..|+..++..-|.--..|-+.|++. +++|..++.+
T Consensus 70 rY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~----~~i~a~d~~e 130 (144)
T 2lj8_A 70 CYAAFDFEYTTNDGPRDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGF----QGIQANDASG 130 (144)
T ss_dssp EEEEEEEEECSSSSSEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTS----EEEECCGGGT
T ss_pred cceeeeeeeccCCCCcccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCe----eEEEeCChHH
Confidence 68998875432 2 23455689999999999998888888888888873 2556665543
No 32
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=90.76 E-value=1.5 Score=28.10 Aligned_cols=45 Identities=18% Similarity=0.238 Sum_probs=36.1
Q ss_pred ceeeeeeeeCCceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCe
Q psy13831 4 AFTFQPYKVYGTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPV 52 (82)
Q Consensus 4 ~~~~yty~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~v 52 (82)
+|++|. +| .+..+.+|.+..|+..++..-|.--..|-+.|+|..+
T Consensus 80 rY~~y~---dg-~k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v 124 (139)
T 2l72_A 80 RFGVYD---CG-NKIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATA 124 (139)
T ss_dssp CEEEEE---CS-SCEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCS
T ss_pred EEEEEc---CC-CcEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceE
Confidence 688888 44 6666778999999999998888777778888887544
No 33
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=88.56 E-value=1.1 Score=28.11 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=39.5
Q ss_pred ceeeeeeee--CC--ceeEEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcC---CCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKV--YG--TMEQHIHFWLGK-NTSTDEAAVAAYKSVELDNYLN---GSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~--~~--~~~~~iy~W~G~-~ss~de~~aaa~~a~~ld~~l~---~~~vq~Rv~QGkEp~~ 64 (82)
.|++|.|.. .+ +....+.+|.+. .++..++..-|.--..|-+.++ |-.+ .+++|..++.+
T Consensus 57 rY~~y~~~~~~~~~~~~k~vfI~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v-~~~iea~d~~e 124 (135)
T 2w0i_A 57 RYHFFLYKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEI-AKKIEIGDGAE 124 (135)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEEEESCGGG
T ss_pred EEEEEecccccCCCCCccEEEEEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCce-eEEEEcCChhh
Confidence 588888854 22 234445689999 9999999888877777777676 4221 13456555543
No 34
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=86.77 E-value=3.8 Score=26.16 Aligned_cols=57 Identities=12% Similarity=0.039 Sum_probs=39.7
Q ss_pred ceeeeeeee---CC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKV---YG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~---~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|.. ++ +....+.+|.+..++..++..-|..-..|-+.+ |-. .++|..++.+
T Consensus 73 rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~---~~iea~d~~E 134 (151)
T 1v6f_A 73 RFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELT---KVFEIRNTED 134 (151)
T ss_dssp EEEEEECCEECTTSCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCS---EEEEESSGGG
T ss_pred eEEEEecccccCCCcccccEEEEEECCCCCChHHheehHHHHHHHHHHh-CCe---EEEEECChHH
Confidence 689999853 33 234456789999999999998887777787888 422 2445555543
No 35
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=86.57 E-value=4.5 Score=25.64 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=37.3
Q ss_pred eeeeeeee--C--CceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCeEE
Q psy13831 5 FTFQPYKV--Y--GTMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSPVQH 54 (82)
Q Consensus 5 ~~~yty~~--~--~~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~vq~ 54 (82)
|.+|-+.. . .+.+..+..|.|..++.-.++..+.....+.+.|+|-.+++
T Consensus 58 Ya~~r~~~~~~~~~~~K~vfI~W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i 111 (141)
T 1t3y_A 58 FAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEF 111 (141)
T ss_dssp EEEEEEEECSGGGCEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTTSCCCSEEE
T ss_pred EEEEEEEecCCCCceeeEEEEEECCCCCCHHHhhhHHHHHHHHHHHhcccEEEE
Confidence 55666642 1 23455556799999999999999999999999998855443
No 36
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=86.46 E-value=1.6 Score=28.80 Aligned_cols=46 Identities=9% Similarity=0.154 Sum_probs=36.2
Q ss_pred ceeeeeeee---CC-ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy13831 4 AFTFQPYKV---YG-TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLNG 49 (82)
Q Consensus 4 ~~~~yty~~---~~-~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~ 49 (82)
+|++|.|.. ++ +.+..+.+|.+..|+..++..-|.--..|-+.|+|
T Consensus 90 rY~ly~~~~~~~~~~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~g 139 (174)
T 1ak6_A 90 RYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQG 139 (174)
T ss_dssp CCEECCCCCCCSSCSCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTT
T ss_pred EEEEEeCcccCCCCccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcC
Confidence 799999943 22 34556678999999999998888777778888987
No 37
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=84.99 E-value=3.2 Score=26.82 Aligned_cols=45 Identities=16% Similarity=0.101 Sum_probs=34.7
Q ss_pred ceeeeeeee---CC--ceeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy13831 4 AFTFQPYKV---YG--TMEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLN 48 (82)
Q Consensus 4 ~~~~yty~~---~~--~~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~ 48 (82)
+|++|.|.. ++ +....+.+|.+..++..++..-|.--..|-+.++
T Consensus 79 RY~vy~~~~~~~~g~~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~lg 128 (154)
T 1vkk_A 79 RFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAE 128 (154)
T ss_dssp EEEEEECCEECTTSCEECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeeccCCCcccccEEEEEECCCCCChhhhhhhHhhHHHHHHhhC
Confidence 589998853 33 2344557899999999999988888888888883
No 38
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=84.11 E-value=4.7 Score=26.28 Aligned_cols=45 Identities=16% Similarity=0.109 Sum_probs=33.9
Q ss_pred ceeeeeeee--CC--ceeEEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcC
Q psy13831 4 AFTFQPYKV--YG--TMEQHIHFWLGK-NTSTDEAAVAAYKSVELDNYLN 48 (82)
Q Consensus 4 ~~~~yty~~--~~--~~~~~iy~W~G~-~ss~de~~aaa~~a~~ld~~l~ 48 (82)
+|++|.|.. .+ +.+..+.+|.+. .++..++..-|..-..|-+.+.
T Consensus 82 RY~~y~~~~~~~~~~~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~ 131 (166)
T 2d8b_A 82 RYHFFLYKHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVE 131 (166)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHT
T ss_pred eEEEEeccccCCCCccccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHh
Confidence 688998854 33 234445689999 9999999888877777777777
No 39
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=83.61 E-value=2.5 Score=27.72 Aligned_cols=60 Identities=18% Similarity=0.102 Sum_probs=36.4
Q ss_pred ceeeeeeee--CCc---eeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC---CCCeEEEeecCCCChh
Q psy13831 4 AFTFQPYKV--YGT---MEQHIHFWLGKNTSTDEAAVAAYKSVELDNYLN---GSPVQHREVQGGESIR 64 (82)
Q Consensus 4 ~~~~yty~~--~~~---~~~~iy~W~G~~ss~de~~aaa~~a~~ld~~l~---~~~vq~Rv~QGkEp~~ 64 (82)
+|++|.|.. +|. ..-.||+|.+..|+..++-.=|.--..|-+.+. |-.+ .+++|..+|.+
T Consensus 77 RY~vyd~~~~~~g~~~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i-~k~iea~d~~E 144 (164)
T 3daw_B 77 RYHFFLYKHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDV-IRKIEIDNGDE 144 (164)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCE-EEEEEESSSSS
T ss_pred eEEEEecccccCCCccccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCce-eEEEEeCChHH
Confidence 689999855 232 223346677768999998766655555555554 4211 45666666654
No 40
>3fmb_A Dimeric protein of unknown function and ferredoxi fold; YP_212648.1, stress responsive A/B barrel domain; HET: MSE; 1.85A {Bacteroides fragilis}
Probab=37.72 E-value=63 Score=19.56 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=22.5
Q ss_pred eCCceeEEEEEEeCCCCCHHHHHHHHHHHHH
Q psy13831 12 VYGTMEQHIHFWLGKNTSTDEAAVAAYKSVE 42 (82)
Q Consensus 12 ~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~ 42 (82)
.+.-..+++.||.=.+++.+++........+
T Consensus 17 ~~~mI~HIVlfklK~~~~~~~~~~~~~~~~~ 47 (118)
T 3fmb_A 17 FQGMVKHIVLFKLRDDVPVEEKLVVMNSFKE 47 (118)
T ss_dssp CCSCEEEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
Confidence 4556789999999999998887655433333
No 41
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=27.80 E-value=66 Score=16.27 Aligned_cols=32 Identities=9% Similarity=0.160 Sum_probs=20.9
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCC
Q psy13831 19 HIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSP 51 (82)
Q Consensus 19 ~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~ 51 (82)
.|..+.|+ +....+..+...+..|.+.++-++
T Consensus 4 ~i~~~~gr-s~eqk~~l~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 4 TVKMLEGR-TDEQKRNLVEKVTEAVKETTGASE 35 (61)
T ss_dssp EEEEESCC-CHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred EEEEcCCC-CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 35667776 444455666677777778887655
No 42
>2ph7_A Uncharacterized protein AF_2093; structural genomics, southeast collaboratory for structural genomics, secsg; 2.40A {Archaeoglobus fulgidus dsm 4304}
Probab=27.18 E-value=1.4e+02 Score=21.00 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEeecCCCChhHHhccc
Q psy13831 28 TSTDEAAVAAYKSVELDNYLNGSPVQHREVQGGESIRFRGYFK 70 (82)
Q Consensus 28 ss~de~~aaa~~a~~ld~~l~~~~vq~Rv~QGkEp~~Fl~lFk 70 (82)
++.++.......=..+..++++.-+ +-|.-+++|.-||++|+
T Consensus 145 ~~i~d~~~~ldv~~r~ase~~~e~v-ivVPtE~~l~PFm~Ffr 186 (246)
T 2ph7_A 145 STIDDTFEDVDIHLRMVDEVDGDYV-VIVPTENELNPFLKFFK 186 (246)
T ss_dssp CCHHHHHHTHHHHHHHTTSSSSEEE-EEEECCSSSHHHHHHHH
T ss_pred EeccccceechHHHHHHhhcCCcEE-EEEeCCCCccHHHHHHH
Confidence 6666655544333333555666554 44778999999999997
No 43
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=25.39 E-value=74 Score=16.06 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=20.7
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCC
Q psy13831 19 HIHFWLGKNTSTDEAAVAAYKSVELDNYLNGSP 51 (82)
Q Consensus 19 ~iy~W~G~~ss~de~~aaa~~a~~ld~~l~~~~ 51 (82)
.|+.+.|+ +....+..+...+..|.+.++-++
T Consensus 4 ~I~~~~gr-s~e~k~~l~~~i~~~l~~~lg~p~ 35 (62)
T 1otf_A 4 QLYIIEGR-TDEQKETLIRQVSEAMANSLDAPL 35 (62)
T ss_dssp EEEEESCC-CHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEcCCC-CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 35667776 444445566677777778787655
No 44
>2gkp_A Hypothetical protein NMB0488; structural genomics, APC83854, PSI, PR structure initiative; HET: MSE; 1.35A {Neisseria meningitidis} SCOP: d.351.1.1
Probab=25.13 E-value=95 Score=20.56 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=17.5
Q ss_pred EEeCCCCCHHHHHHHHHHHHH
Q psy13831 22 FWLGKNTSTDEAAVAAYKSVE 42 (82)
Q Consensus 22 ~W~G~~ss~de~~aaa~~a~~ 42 (82)
.|+-.++|.+|.|+|...|..
T Consensus 144 iilp~d~s~eEiGaAlr~Afs 164 (167)
T 2gkp_A 144 VILSLDNSPEEIGAGLKLALS 164 (167)
T ss_dssp EEEETTSCHHHHHHHHHHHHH
T ss_pred eEeeCCCCHHHHHHHHHHHHh
Confidence 556779999999999988864
No 45
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=23.27 E-value=81 Score=18.72 Aligned_cols=41 Identities=15% Similarity=0.006 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCeEEEe------ecCCCChhHHhcccCC
Q psy13831 31 DEAAVAAYKSVELDNYLNGSPVQHRE------VQGGESIRFRGYFKNG 72 (82)
Q Consensus 31 de~~aaa~~a~~ld~~l~~~~vq~Rv------~QGkEp~~Fl~lFkg~ 72 (82)
+++..|+..-.+||+..|+.. |+-| .--+||.+|+.++-|.
T Consensus 42 ~ek~iA~~IK~~fDkkyG~~W-hcIVG~~Fgs~vThe~~~fiyF~~g~ 88 (97)
T 4ds1_A 42 LERDIAGTVKKQLDVKYGNTW-HVIVGKNFGSYVTHEKGHFVYFYIGP 88 (97)
T ss_dssp SHHHHHHHHHHHHHHHHCSCE-EEEEEEEEEEEEEECTTEEEEEEETT
T ss_pred CHHHHHHHHHHHHhCccCCCC-EEEEccCccEEEEEcCCcEEEEEECC
Confidence 456677778888999887633 4322 3346999998776665
No 46
>4ekx_C 14L protein; binding protein, beta trefoil, immunoglobulin fold, YLDV, YA yatapoxvirus, cytokine signaling, cytokine-viral prote complex; 1.75A {Yaba-like disease virus} PDB: 4eee_A
Probab=21.42 E-value=25 Score=22.09 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=12.3
Q ss_pred eEEEEEEeCCCCCHHH
Q psy13831 17 EQHIHFWLGKNTSTDE 32 (82)
Q Consensus 17 ~~~iy~W~G~~ss~de 32 (82)
...+|.|+|.++..|+
T Consensus 32 fS~lYW~lgN~sfIe~ 47 (116)
T 4ekx_C 32 FSYVYWIIGKNKTVDQ 47 (116)
T ss_dssp SCEEEEEETTTEEGGG
T ss_pred ccEEEEEEcCCcchhh
Confidence 4568888998887776
No 47
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=20.44 E-value=1.3e+02 Score=18.00 Aligned_cols=41 Identities=17% Similarity=0.083 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCeEEEe------ecCCCChhHHhcccCC
Q psy13831 31 DEAAVAAYKSVELDNYLNGSPVQHRE------VQGGESIRFRGYFKNG 72 (82)
Q Consensus 31 de~~aaa~~a~~ld~~l~~~~vq~Rv------~QGkEp~~Fl~lFkg~ 72 (82)
+++..|...-.+||+..|+.. |+=| .--.|+.+|+.++=|.
T Consensus 47 ~ekdiA~~IK~~fDkkyG~~W-HcIVG~~FGs~vThe~~~fiyF~~g~ 93 (102)
T 1yo3_A 47 VEKDIAAHIKKEFDRKYDPTW-HCVVGRNFGSYVTHETKNFIYFYIGQ 93 (102)
T ss_dssp SHHHHHHHHHHHHHHHHCSCE-EEEESSSCCCEEESCCCEEEEEEETT
T ss_pred cHHHHHHHHHHHHhhhcCCCC-EEEEccCeeEEEEEeCCcEEEEEECC
Confidence 355677777788999887633 3322 1224888888777665
No 48
>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A
Probab=20.39 E-value=54 Score=17.95 Aligned_cols=20 Identities=30% Similarity=0.629 Sum_probs=14.3
Q ss_pred EEEeCCCCCHHHHHHHHHHH
Q psy13831 21 HFWLGKNTSTDEAAVAAYKS 40 (82)
Q Consensus 21 y~W~G~~ss~de~~aaa~~a 40 (82)
..|+|.-.|.+|-..|-..|
T Consensus 27 r~~LGtf~T~eeAA~AyD~A 46 (63)
T 1gcc_A 27 RVWLGTFETAEDAALAYDRA 46 (63)
T ss_dssp EEEEEEESSHHHHHHHHHHH
T ss_pred EEEeeeCCCHHHHHHHHHHH
Confidence 57999999988865554433
Done!