BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13834
(104 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 7 GNGYITTDVLREI-LKELDDKISRHPVYQDTYRVTK-STKIGNGYITTDVLREILKELDD 64
GNG I D + I + L ++++ + Q+ + K GNGYI+TDV+REIL ELD+
Sbjct: 63 GNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDE 122
Query: 65 KISADDLDMMIAEIDSDGSGTVDFD 89
+S++DLD MI EID+DGSGTVDF+
Sbjct: 123 TLSSEDLDAMIDEIDADGSGTVDFE 147
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 43 TKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQ 92
T G+G ++TD + IL+ L + + + +I E D G+G +DFD +
Sbjct: 24 TPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFK 73
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+TDV+REIL ELD+ +S++DLD MI EID+DGSGTVDF+
Sbjct: 14 KEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 59
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
++ +RV K G I DVLR ILK L D+++ D+++ MIAE D+DGSGTVD++ +
Sbjct: 10 KEAFRVLDKEK--KGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE--EF 65
Query: 94 KILILAP 100
K L+++
Sbjct: 66 KCLMMSS 72
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDQMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 361 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 417
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYE 441
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 323 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 360 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 416
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYE 440
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 322 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 360 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 416
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYE 440
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 322 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 326 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 382
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 383 LTDEEVDEMIREADIDGDGQVNYE 406
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 288 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 326 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 382
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 383 LTDEEVDEMIREADIDGDGQVNYE 406
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 288 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 323 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 379
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 380 LTDEEVDEMIREADIDGDGQVNYE 403
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 285 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 22 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 57 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 113
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYE 137
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 19 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 61 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 117
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 118 LTDEEVDEMIREADIDGDGQVNYE 141
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 4 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 63
Query: 85 TVDF 88
T+DF
Sbjct: 64 TIDF 67
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 119
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 120 LTDEEVDEMIREADIDGDGQVNYE 143
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 6 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 65
Query: 85 TVDF 88
T+DF
Sbjct: 66 TIDF 69
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 56 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 112
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 113 LTDEEVDEMIREADIDGDGQVNYE 136
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 18 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 55 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 111
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 112 LTDEEVDEMIREADIDGDGQVNYE 135
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 17 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 57 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 113
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYE 137
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 19 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 57 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 113
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 114 LTDEEVDEMIREADIDGDGQVNYE 137
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 19 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 65 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 121
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 122 LTDEEVDEMIREADIDGDGQVNYE 145
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 8 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 67
Query: 85 TVDF 88
T+DF
Sbjct: 68 TIDF 71
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + + + D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 360 GNGTIDFPEFLTMMARWMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 416
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 417 LTDEEVDEMIREADIDGDGQVNYE 440
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 322 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 58 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 114
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 115 LTDEEVDEMIREADIDGDGQVNYE 138
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 85 TVDF 88
T+DF
Sbjct: 61 TIDF 64
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 386 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG GT+DF
Sbjct: 313 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 395 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG GT+DF
Sbjct: 322 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 395 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 322 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 394 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 23 LDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDG 82
L D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 83 SGTVDF 88
GT+DF
Sbjct: 360 DGTIDF 365
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 394 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG GT+DF
Sbjct: 321 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 394 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 23 LDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDG 82
L D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 83 SGTVDF 88
GT+DF
Sbjct: 360 DGTIDF 365
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K G+G IT + L +++ LD + ++L MI+E+D+DG+GT++FD
Sbjct: 21 KDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 32 REAFRV--EDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K G+G IT + L +++ LD + ++L MI+E+D+DG+GT++FD
Sbjct: 21 KDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLNLMARKMKDTDSEEEL-KEAFRVFD--KDGNGFISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADVDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K G+G IT + L +++ LD + ++L MI+E+D+DG+GT++FD
Sbjct: 21 KDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYITTDVLREIL-KELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I D ++ K++ D + + ++ ++V + NGYI+ LR ++ L +K
Sbjct: 59 GNGTIEFDEFLSLMAKKVKDTDAEEEL-KEAFKVFDKDQ--NGYISASELRHVMINLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ ++++ MI E D DG G V+++
Sbjct: 116 LTDEEVEQMIKEADLDGDGQVNYE 139
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLNLMARKMKDTDSEEKL-KEAFRVFD--KDGNGFISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADVDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 56 GNGTIDFPEFLNLMARKMKDTDSEEEL-KEAFRVFD--KDGNGFISAAELRHVMTNLGEK 112
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 113 LTDEEVDEMIREADVDGDGQVNYE 136
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 18 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGFISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGFISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGFISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 5 REAFRVFD--KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 58
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGFISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEK 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E + DG G V+++
Sbjct: 116 LTDEEVDEMIREANIDGDGQVNYE 139
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 8 REAFRVFD--KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 20 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 8 REAFRVFD--KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I L + +++ D S + ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 360 GNGTIDFPQFLTMMARKMKDTDSEEEI-REAFRVF--GKDGNGYISAAQLRHVMTNLGEK 416
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E DG G V+++
Sbjct: 417 LTDEEVDEMIREAGIDGDGQVNYE 440
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+ +DG+GT+DF
Sbjct: 322 KDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 17 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNG+I+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGFISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIRESDIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 19 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEX 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 117 LTDEEVDEMIREADIDGDGQVNYE 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV K GNGYI+ LR ++ L +
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEI-REAFRVFD--KDGNGYISAAELRHVMTNLGEX 115
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G V+++
Sbjct: 116 LTDEEVDEMIREADIDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 94 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
++ +RV K GNG+++ LR ++ L +K+S +++D MI D+DG G V+++ R
Sbjct: 86 REAFRVFD--KDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
Query: 94 KIL 96
++
Sbjct: 144 VLV 146
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ V + + K G+G ITT L +++ L + +L M++EID DG+G
Sbjct: 2 DQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNG 61
Query: 85 TVDF 88
TVDF
Sbjct: 62 TVDF 65
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF-DVIQ 92
K GNGYI+ LR ++ L +K++ +++D MI E D DG G V++ D +Q
Sbjct: 18 KDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K GNG+I+ LR ++ L +K++ +++D MI E D DG G V+++
Sbjct: 84 REAFRVFD--KDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S ++ +RV K GNGYI+ LR ++ L +K
Sbjct: 55 GNGTIDFPEFLTMMARKMKDTDSEE--IREAFRVFD--KDGNGYISAAELRHVMTNLGEK 110
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E + DG G V+++
Sbjct: 111 LTDEEVDEMIREANIDGDGQVNYE 134
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 17 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV + NG+I+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEEL-KEAFRVFDKDQ--NGFISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G +++D
Sbjct: 117 LTDEEVDEMIREADVDGDGQINYD 140
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 22 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKIL 96
GNG I+ LR ++ L +K++ D++D MI E D DG G ++++ R ++
Sbjct: 96 GNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKIL 96
GNG I+ LR ++ L +K++ D++D MI E D DG G ++++ R ++
Sbjct: 96 GNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKIL 96
GNG I+ LR ++ L +K++ D++D MI E D DG G ++++ R ++
Sbjct: 21 GNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
NGYI+ LR ++ L +K++ ++++ MI E D DG G V+++
Sbjct: 23 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
NGYI+ LR ++ L +K++ ++++ MI E D DG G V+++
Sbjct: 18 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 85 TVDF 88
T+DF
Sbjct: 63 TIDF 66
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF----DVIQRKI 95
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF +++ RK+
Sbjct: 21 KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKM 76
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR + L +K++ +++D I E D DG G V+++
Sbjct: 95 KDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L + + L + +L I E+D+DG+GT+DF
Sbjct: 22 KDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 7 GNGYI-TTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDK 65
GNG I + L + +++ D S + ++ +RV + NG+I+ LR ++ L +K
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEEL-KEAFRVFDKDQ--NGFISAAELRHVMTNLGEK 116
Query: 66 ISADDLDMMIAEIDSDGSGTVDFD 89
++ +++D MI E D DG G ++++
Sbjct: 117 LTDEEVDEMIREADVDGDGQINYE 140
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
DD+IS +++ + + K G+G ITT L +++ L + +L MI E+D+DG+
Sbjct: 7 DDQISE---FKEAFSLFD--KDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 84 GTVDF 88
GT+DF
Sbjct: 62 GTIDF 66
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L +++ L + +L MI E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 22 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 106 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR + L +K++ +++D I E D DG G V+++
Sbjct: 94 KDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L + + L + +L I E+D+DG+GT++F
Sbjct: 21 KDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 106 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNGYI+ LR + L +K++ +++D I E D DG G V+++
Sbjct: 94 KDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
K G+G ITT L + + L + +L I E+D+DG+GT+DF
Sbjct: 21 KDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
++ +RV K NG+I+ LR ++ L +K++ +++D MI E D DG G ++++
Sbjct: 7 KEAFRVF--DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + +LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K D +R+ K +GYI + L+ +L+ + I+ DD++ ++ + D +
Sbjct: 88 DSKGKSEEELSDLFRMF--DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 84 GTVDFD 89
G +D+D
Sbjct: 146 GRIDYD 151
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +G+I + L EIL+ + ++ +D++ ++ + D + G +DFD
Sbjct: 107 KNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K D +R+ K +GYI D L+ +L+ + I+ DD++ ++ + D +
Sbjct: 88 DSKGKSEEELSDLFRMW--DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 84 GTVDFD 89
G +D+D
Sbjct: 146 GRIDYD 151
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K D +R+ K +GYI D L+ +L+ + I+ DD++ ++ + D +
Sbjct: 88 DSKGKSEEELSDLFRMF--DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 84 GTVDFD 89
G +D+D
Sbjct: 146 GRIDYD 151
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K D +R+ K +GYI D L+ +L+ + I+ DD++ ++ + D +
Sbjct: 88 DSKGKSEEELSDLFRMX--DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 84 GTVDFD 89
G +D+D
Sbjct: 146 GRIDYD 151
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++++ L + ++L MI E+D DGSGTVDFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K D +R+ K +GYI D L+ +L+ + I+ DD++ ++ + D +
Sbjct: 88 DSKGKSEEELSDLFRMF--DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNND 145
Query: 84 GTVDFD 89
G +D+D
Sbjct: 146 GRIDYD 151
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +G+I + L EIL+ + + +D++ ++ + D + G +DFD
Sbjct: 107 KNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 30 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +G+I + L EIL+ + ++ +D++ ++ + D + G +DFD
Sbjct: 104 KNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 149
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 35 DTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
D +R+ K +G+I + L EIL+ + ++ +D++ ++ + D + G +DFD
Sbjct: 100 DCFRIF--DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+T L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
D K +D +R+ K +G+I + L EIL+ + ++ +D++ ++ + D +
Sbjct: 89 DAKGKSEEELEDCFRIF--DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNND 146
Query: 84 GTVDFD 89
G +DFD
Sbjct: 147 GRIDFD 152
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
G+G+IT D LR + L + ++LD MI E D D G V+++ R +
Sbjct: 19 GDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 25 DKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSG 84
D+++ + + + K G+G ITT L +++ L + +L MI E+D+DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 85 TVDF 88
T+DF
Sbjct: 62 TIDF 65
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I L+ ++ L + +++ MI+EID DGSGT+DF+
Sbjct: 43 GSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 47 NGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+G I+T L ++ + L + ++L I E+D DGSGTVDFD
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFD 75
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G+I+ LR ++ L +K++ +++D MI E D DG G ++++
Sbjct: 96 GDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+ L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 30 GGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+GYI + L EI + + ++ ++++ ++ + D + G +DFD
Sbjct: 106 ADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G G I+ L +++ L + ++LD +I E+D DGSGT+DF+
Sbjct: 30 GGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+GYI + L EI + + ++ ++++ ++ + D + G +DFD
Sbjct: 106 ADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I L+ ++ L + +++ MI+EID DGSGT+DF+
Sbjct: 41 GSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
+G IT LR + KEL + ++ ++L MIAE D + +D D R
Sbjct: 114 NSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 161
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I+ L + L+ L SAD++ M+AEID+DG G +DF+
Sbjct: 15 GDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 57
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I+ L + L+ L SAD++ M+AEID+DG G +DF+
Sbjct: 16 GDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 58
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G+G I+ L E LK L I+ D++ M+AEID+DG G + F
Sbjct: 22 GDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I+T L ++ + D I ++L+ +I ++D++ G VDF+
Sbjct: 430 GSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN 473
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I L+ ++ L + +++ MIA+ID DGSGT+DF+
Sbjct: 21 GSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
Score = 28.9 bits (63), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVD 87
G I+ L+ + KEL + ++ ++L MI E D DG G V+
Sbjct: 96 GKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
G+G I++ L + LK L ++ D++ M+AEID+DG G + FD
Sbjct: 24 GDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 24 DDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGS 83
DD++S +++ + + S + G+IT + L+ +LK+ ++ + M E D+ G+
Sbjct: 2 DDQVSE---FKEAFELFDSER--TGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGN 56
Query: 84 GTVDF 88
G + F
Sbjct: 57 GKIQF 61
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G GYIT + L++ L++ K+ + D+++ +IDSDGSG +D+
Sbjct: 65 GKGYITKEQLKKGLEKDGLKLPYN-FDLLLDQIDSDGSGKIDY 106
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKEL-DDKISADDLDMMIAEIDSDGSGTVDFDVIQ 92
+D +R + G+G I+T LRE +++L ++ D++ +I ++D +G G VDF+
Sbjct: 105 RDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Query: 93 R 93
R
Sbjct: 163 R 163
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 32.0 bits (71), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K GNG I LR++L L D +++ +++ ++ E+ G G ++++
Sbjct: 87 KEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKEL-DDKISADDLDMMIAEIDSDGSGTVDFDVIQ 92
+D +R + G+G I+T LRE +++L ++ D++ +I ++D +G G VDF+
Sbjct: 91 RDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Query: 93 RKI 95
R +
Sbjct: 149 RMM 151
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKEL-DDKISADDLDMMIAEIDSDGSGTVDFDVIQ 92
+D +R + G+G I+T LRE +++L ++ D++ +I ++D +G G VDF+
Sbjct: 10 RDAFREFDTN--GDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
Query: 93 R 93
R
Sbjct: 68 R 68
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 44 KIGNGYITTDVLREILKELD-DKISADDLDMMIAEIDSDGSGTVDF 88
K G+GYIT D +++ K+ D I DD MI EID D G +D+
Sbjct: 93 KDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEIDQDNDGQIDY 135
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
GNG+I+ L ++ L + +L+++I +D DG G VDF+
Sbjct: 49 GNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKEL-DDKISADDLDMMIAEIDSDGSGTVDFDVIQ 92
+D +R + G+G I+T LRE ++ L ++ D++ +I ++D +G G VDF+
Sbjct: 91 RDAFREFDTN--GDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Query: 93 RKI 95
R +
Sbjct: 149 RMM 151
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + AD +D ++ E+D DG G VDF Q +
Sbjct: 19 SGKEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDF---QEYV 75
Query: 96 LILAPET 102
+++A T
Sbjct: 76 VLVAALT 82
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVD 87
G I+ LR + KEL + ++ ++L MI E D DG G ++
Sbjct: 111 GKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
+G IT LR + KEL + ++ ++L MIAE D + +D D R
Sbjct: 22 NSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 69
>pdb|3DPU|A Chain A, Roccor Domain Tandem Of Rab Family Protein (Roco)
pdb|3DPU|B Chain B, Roccor Domain Tandem Of Rab Family Protein (Roco)
Length = 535
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 30 HPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLD 72
H V YR+ S+K NG++ T L IL E ++I D+ D
Sbjct: 288 HWVTIGVYRIINSSKTKNGHLNTSALGYILNE--EQIRCDEYD 328
>pdb|3DPT|A Chain A, Cor Domain Of Rab Family Protein (Roco)
pdb|3DPT|B Chain B, Cor Domain Of Rab Family Protein (Roco)
Length = 332
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 30 HPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLD 72
H V YR+ S+K NG++ T L IL E ++I D+ D
Sbjct: 85 HWVTIGVYRIINSSKTKNGHLNTSALGYILNE--EQIRCDEYD 125
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTV 86
G I+ L+ + KEL + ++ ++L MI E D DG G V
Sbjct: 94 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G G I L+ ++ L + +++ MI+EID +G+G ++F
Sbjct: 19 GTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTV 86
G I+ L+ + KEL + ++ ++L MI E D DG G V
Sbjct: 26 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
+G+I D LRE+L + D+ + +++D M E D G ++
Sbjct: 89 ASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNY 131
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTV 86
G I+ L+ + KEL + ++ ++L MI E D DG G V
Sbjct: 36 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 74
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G G IT LR+ L E + + D+++ +IDSDGSG +D+
Sbjct: 68 GKGNITKLQLRKGL-ERSGLMLPPNFDLLLDQIDSDGSGNIDY 109
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 95 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 94 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMI--AEIDSDGSGTVDFDVIQRKIL 96
G G+I+ LR +L L +++S +D+D +I ++ D G V ++ +K++
Sbjct: 94 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVD 87
G+G + L+ L +K S D++D ++E DG+G +D
Sbjct: 138 GDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLID 179
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G G I L+ ++ L + +++ MI+EID +G+G ++F
Sbjct: 44 GTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 74 MIAEIDSDGSGTVDF 88
MI E+D+DG+GT+DF
Sbjct: 6 MINEVDADGNGTIDF 20
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVD 87
G I+ LR + KEL + ++ ++L I E D DG G ++
Sbjct: 111 GKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEIN 150
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
GNG I+ D L + D + + MI+ IDS+ G VDF+
Sbjct: 439 GNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE 480
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKILILAP 100
GNG I+ D L + D + + MI+ IDS+ G VDF+ + I L
Sbjct: 156 GNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS 208
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + D +D ++ E+D +G G VDF Q +
Sbjct: 19 SGKEGDKYKLSKKQLKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF---QEYV 75
Query: 96 LILAPET 102
+++A T
Sbjct: 76 VLVAALT 82
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI D L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 17 KNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 48 GYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTV 86
G I+ L+ + KEL + ++ ++L I E D DG G V
Sbjct: 119 GKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEV 157
>pdb|2OTN|A Chain A, Crystal Structure Of The Catalytically Active Form Of
Diaminopimelate Epimerase From Bacillus Anthracis
pdb|2OTN|B Chain B, Crystal Structure Of The Catalytically Active Form Of
Diaminopimelate Epimerase From Bacillus Anthracis
Length = 308
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 33 YQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDG 82
+ + TK +GN YI ++ E + E D + A+ + + I +DG
Sbjct: 20 HMSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINTGIGADG 69
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + D +D ++ E+D +G G VDF Q +
Sbjct: 20 SGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF---QEYV 76
Query: 96 LILAPET 102
+++A T
Sbjct: 77 VLVAALT 83
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + D +D ++ E+D +G G VDF Q +
Sbjct: 19 SGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF---QEYV 75
Query: 96 LILAPET 102
+++A T
Sbjct: 76 VLVAALT 82
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + D +D ++ E+D +G G VDF Q +
Sbjct: 19 SGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF---QEYV 75
Query: 96 LILAPET 102
+++A T
Sbjct: 76 VLVAALT 82
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 42 STKIGNGY-ITTDVLREILKE-----LDDKISADDLDMMIAEIDSDGSGTVDFDVIQRKI 95
S K G+ Y ++ L+E+L+ LD + D +D ++ E+D +G G VDF Q +
Sbjct: 19 SGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF---QEYV 75
Query: 96 LILAPET 102
+++A T
Sbjct: 76 VLVAALT 82
>pdb|1W79|A Chain A, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W79|B Chain B, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W79|C Chain C, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W79|D Chain D, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W8Q|A Chain A, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W8Q|B Chain B, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W8Q|C Chain C, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W8Q|D Chain D, Crystal Structure Of The
Dd-Transpeptidase-Carboxypeptidase From Actinomadura R39
pdb|1W8Y|A Chain A, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase From
Actinomadura R39.
pdb|1W8Y|B Chain B, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase From
Actinomadura R39.
pdb|1W8Y|C Chain C, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase From
Actinomadura R39.
pdb|1W8Y|D Chain D, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase From
Actinomadura R39.
pdb|2VGJ|A Chain A, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGJ|B Chain B, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGJ|C Chain C, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGJ|D Chain D, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGK|A Chain A, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGK|B Chain B, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGK|C Chain C, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2VGK|D Chain D, Crystal Structure Of Actinomadura R39 Dd-Peptidase
Complexed With A Peptidoglycan-Mimetic Cephalosporin
pdb|2XLN|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39
Dd-Peptidase And A Boronate Inhibitor
pdb|2XLN|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39
Dd-Peptidase And A Boronate Inhibitor
pdb|2XLN|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39
Dd-Peptidase And A Boronate Inhibitor
pdb|2XLN|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39
Dd-Peptidase And A Boronate Inhibitor
Length = 489
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 63 DDKISADDLDMMIAEIDSDGSGTVDFDV 90
D +SA+DLD M AE+ + G TV D+
Sbjct: 95 DPTLSAEDLDAMAAEVAASGVRTVRGDL 122
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 66 ISADDLDMMIAEIDSDGSGTVDFDVIQRKILILA 99
+ ++ +++E+D + G VDFD Q+ +L L
Sbjct: 449 VDSETWKSVLSEVDKNNDGEVDFDEFQQXLLKLC 482
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 32 VYQDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVD 87
V +D +TK T I N TT+ L ++K LD++ ++ M ++ +D
Sbjct: 136 VNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAYTNDQKNID 191
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 46 GNGYITTDVLREIL--KELDDKISADDLDMMIAEIDSDGSGTVDF 88
GNG I+ + L+ I ++++ + +D ++ E+D +G G +DF
Sbjct: 142 GNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDF 186
>pdb|2WKE|A Chain A, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
Inhibited By 6-Beta-Iodopenicillanate.
pdb|2WKE|B Chain B, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
Inhibited By 6-Beta-Iodopenicillanate.
pdb|2WKE|C Chain C, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
Inhibited By 6-Beta-Iodopenicillanate.
pdb|2WKE|D Chain D, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
Inhibited By 6-Beta-Iodopenicillanate.
pdb|2XDM|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39 Dd
Peptidase And A Peptidoglycan Mimetic Boronate Inhibitor
pdb|2XDM|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39 Dd
Peptidase And A Peptidoglycan Mimetic Boronate Inhibitor
pdb|2XDM|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39 Dd
Peptidase And A Peptidoglycan Mimetic Boronate Inhibitor
pdb|2XDM|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39 Dd
Peptidase And A Peptidoglycan Mimetic Boronate Inhibitor
pdb|2XK1|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39
Dd- Peptidase And A Boronate Inhibitor
pdb|2XK1|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39
Dd- Peptidase And A Boronate Inhibitor
pdb|2XK1|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39
Dd- Peptidase And A Boronate Inhibitor
pdb|2XK1|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39
Dd- Peptidase And A Boronate Inhibitor
pdb|2Y4A|A Chain A, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y4A|B Chain B, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y4A|C Chain C, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y4A|D Chain D, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y55|A Chain A, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y55|B Chain B, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y55|C Chain C, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y55|D Chain D, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y59|A Chain A, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y59|B Chain B, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y59|C Chain C, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|2Y59|D Chain D, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVT|A Chain A, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVT|B Chain B, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVT|C Chain C, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVT|D Chain D, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVW|A Chain A, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVW|B Chain B, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVW|C Chain C, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
pdb|3ZVW|D Chain D, Unexpected Tricovalent Binding Mode Of Boronic Acids
Within The Active Site Of A Penicillin Binding Protein
Length = 466
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 63 DDKISADDLDMMIAEIDSDGSGTVDFDV 90
D +SA+DLD M AE+ + G TV D+
Sbjct: 95 DPTLSAEDLDAMAAEVAASGVRTVRGDL 122
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 46 GNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
G G I L E+L D+ + +++ M A D +G VD+
Sbjct: 95 GKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDY 137
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 8 NGYITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKIS 67
NGYI + + +SR + + +R+ S +G I++ L I D +
Sbjct: 420 NGYIEYSEFVTVAMDRKTLLSRERL-ERAFRMFDSD--NSGKISSTELATIFGVSD--VD 474
Query: 68 ADDLDMMIAEIDSDGSGTVDFDVIQRKILILA 99
++ +++E+D + G VDFD Q+ +L L
Sbjct: 475 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 506
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 8 NGYITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKIS 67
NGYI + + +SR + + +R+ S +G I++ L I D +
Sbjct: 419 NGYIEYSEFVTVAMDRKTLLSRERL-ERAFRMFDSD--NSGKISSTELATIFGVSD--VD 473
Query: 68 ADDLDMMIAEIDSDGSGTVDFDVIQRKILILA 99
++ +++E+D + G VDFD Q+ +L L
Sbjct: 474 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 505
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 35 DTYRVTKSTKIGNGYITTDVLR-EILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
D Y+++K D+L+ E+ LD + AD +D ++ E+D +G G VDF Q
Sbjct: 24 DKYKLSKKE-------LKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDF---QE 73
Query: 94 KILILAPET 102
++++A T
Sbjct: 74 FVVLVAALT 82
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 8 NGYITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGNGYITTDVLREILKELDDKIS 67
NGYI + + +SR + + +R+ S +G I++ L I D +
Sbjct: 396 NGYIEYSEFVTVAMDRKTLLSRERL-ERAFRMFDSD--NSGKISSTELATIFGVSD--VD 450
Query: 68 ADDLDMMIAEIDSDGSGTVDFDVIQRKILILA 99
++ +++E+D + G VDFD Q+ +L L
Sbjct: 451 SETWKSVLSEVDKNNDGEVDFDEFQQMLLKLC 482
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 35 DTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
+ +R+ K +G+I + L EIL+ + + +D++ ++ + D + G +DFD
Sbjct: 14 NCFRIF--DKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 46 GNGYITTDVLREILKELDDKISADDLD--MMIAEIDSDGSGTVDFDVIQRKIL 96
G G I++ +R +LK L ++I+ D + +I D G + ++ + +K++
Sbjct: 98 GQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 26 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
>pdb|3KT4|A Chain A, Crystal Structure Of Tpa1 From Saccharomyces Cerevisiae,
A Component Of The Messenger Ribonucleoprotein Complex
Length = 633
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 11 ITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGN 47
+ D+LR + KE++ +I D YRV +S + N
Sbjct: 43 VNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLAN 79
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 71 LDMMIAEIDSDGSGTVDFD---VIQRKI 95
LD MI E+D +G G V F+ V+ +KI
Sbjct: 47 LDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
pdb|2QZX|B Chain B, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
Length = 342
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 49 YITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDF 88
Y T ++R IL + ++ D + D SGT+DF
Sbjct: 225 YFTRSIVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDF 264
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 16 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 18 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
>pdb|2JE2|A Chain A, Cytochrome P460 From Nitrosomonas Europaea - Probable
Nonphysiological Oxidized Form
pdb|2JE3|A Chain A, Cytochrome P460 From Nitrosomonas Europaea - Probable
Physiological Form
Length = 186
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 2 KGPGAGNGYITTDVL 16
KGPG+GNGY D +
Sbjct: 80 KGPGSGNGYFMGDYI 94
>pdb|3KT7|A Chain A, Crystal Structure Of Tpa1 From Saccharomyces Cerevisiae,
A Component Of The Messenger Ribonucleoprotein Complex
Length = 633
Score = 25.4 bits (54), Expect = 7.4, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 11 ITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGN 47
+ D+LR + KE++ +I D YRV +S + N
Sbjct: 43 VNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLAN 79
>pdb|3KT1|A Chain A, Crystal Structure Of Tpa1 From Saccharomyces Cerevisiae,
A Component Of The Messenger Ribonucleoprotein Complex
Length = 633
Score = 25.4 bits (54), Expect = 7.4, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 11 ITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGN 47
+ D+LR + KE++ +I D YRV +S + N
Sbjct: 43 VNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLAN 79
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 44 KIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K +GYI + L+ +L+ + I+ DD++ ++ + D + G +D+D
Sbjct: 21 KNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
>pdb|3MGU|A Chain A, Saccharomyces Cerevisiae Tpa1
Length = 644
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 11 ITTDVLREILKELDDKISRHPVYQDTYRVTKSTKIGN 47
+ D+LR + KE++ +I D YRV +S + N
Sbjct: 62 VNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLAN 98
>pdb|1XIP|A Chain A, Crystal Structure Of The N-Terminal Domain Of Nup159
Length = 388
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 54 VLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDV 90
V ++ E DD++S D +I ID S FD+
Sbjct: 230 VFGNVISETDDEVSYDQKXYIIKHIDGSASFQETFDI 266
>pdb|3PJ0|A Chain A, Crystal Structure Of A Putative L-Allo-Threonine
Aldolase (Lmo0305) From Listeria Monocytogenes Egd-E At
1.80 A Resolution
pdb|3PJ0|B Chain B, Crystal Structure Of A Putative L-Allo-Threonine
Aldolase (Lmo0305) From Listeria Monocytogenes Egd-E At
1.80 A Resolution
pdb|3PJ0|C Chain C, Crystal Structure Of A Putative L-Allo-Threonine
Aldolase (Lmo0305) From Listeria Monocytogenes Egd-E At
1.80 A Resolution
pdb|3PJ0|D Chain D, Crystal Structure Of A Putative L-Allo-Threonine
Aldolase (Lmo0305) From Listeria Monocytogenes Egd-E At
1.80 A Resolution
Length = 359
Score = 25.4 bits (54), Expect = 8.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 34 QDTYRVTKSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
+ +Y+ T GNG VL E L+ +DD + +D I +G+ DF+
Sbjct: 7 KTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESD--------IYGNGAVIEDFETKIA 58
Query: 94 KIL 96
KIL
Sbjct: 59 KIL 61
>pdb|3G79|A Chain A, Crystal Structure Of Ndp-N-Acetyl-D-Galactosaminuronic
Acid Dehydrogenase From Methanosarcina Mazei Go1
pdb|3G79|B Chain B, Crystal Structure Of Ndp-N-Acetyl-D-Galactosaminuronic
Acid Dehydrogenase From Methanosarcina Mazei Go1
Length = 478
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 27 ISRHPVYQDTYRVTKSTKIGNGYI----TTDVLREILKELDDKISADDLDMMIAEIDSDG 82
+ H + +DTY + + KIG G + D + + ++++D + A ++ +A ++ G
Sbjct: 289 VGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLARKVNDFMPAHMYNLTVAALERLG 348
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 47 NGYITTDVLREILKEL--------DDKISADDLDMMIAEIDSDGSGTVDFDVIQR 93
+G+I T+ L+ LK+L DD A+ D+M+ DS+ G ++ + R
Sbjct: 117 SGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMAR 171
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 41 KSTKIGNGYITTDVLREILKELDDKISADDLDMMIAEIDSDGSGTVDFD 89
K K +G ++ D RE+ + +D+ EID DG+G ++ D
Sbjct: 9 KFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNAD 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.138 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,277,020
Number of Sequences: 62578
Number of extensions: 125967
Number of successful extensions: 906
Number of sequences better than 100.0: 215
Number of HSP's better than 100.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 336
length of query: 104
length of database: 14,973,337
effective HSP length: 69
effective length of query: 35
effective length of database: 10,655,455
effective search space: 372940925
effective search space used: 372940925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)