BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13847
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42003|MAD_DROME Protein mothers against dpp OS=Drosophila melanogaster GN=Mad
PE=1 SV=1
Length = 455
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+ SLF FT P VKKLLGWK+GD E+K++EKAV SLVKKLKK G ++ELE+A++ +
Sbjct: 17 LGSLFSFTSPAVKKLLGWKQGDEEEKWAEKAVDSLVKKLKKRKGAIEELERALSCPGQPS 76
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 77 KCVTIPR 83
>sp|P84025|SMAD3_RAT Mothers against decapentaplegic homolog 3 OS=Rattus norvegicus
GN=Smad3 PE=1 SV=1
Length = 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDG---EDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDP 57
M+S+ PFTPPIVK+LLGWKKG+ E+K+ EKAVKSLVKKLKK+ LDELEKAITTQ+
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
Query: 58 NTKCVTIPR 66
NTKC+TIPR
Sbjct: 61 NTKCITIPR 69
>sp|P84024|SMAD3_PIG Mothers against decapentaplegic homolog 3 OS=Sus scrofa GN=SMAD3
PE=2 SV=1
Length = 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDG---EDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDP 57
M+S+ PFTPPIVK+LLGWKKG+ E+K+ EKAVKSLVKKLKK+ LDELEKAITTQ+
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
Query: 58 NTKCVTIPR 66
NTKC+TIPR
Sbjct: 61 NTKCITIPR 69
>sp|Q8BUN5|SMAD3_MOUSE Mothers against decapentaplegic homolog 3 OS=Mus musculus
GN=Smad3 PE=1 SV=2
Length = 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDG---EDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDP 57
M+S+ PFTPPIVK+LLGWKKG+ E+K+ EKAVKSLVKKLKK+ LDELEKAITTQ+
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
Query: 58 NTKCVTIPR 66
NTKC+TIPR
Sbjct: 61 NTKCITIPR 69
>sp|P84022|SMAD3_HUMAN Mothers against decapentaplegic homolog 3 OS=Homo sapiens
GN=SMAD3 PE=1 SV=1
Length = 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDG---EDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDP 57
M+S+ PFTPPIVK+LLGWKKG+ E+K+ EKAVKSLVKKLKK+ LDELEKAITTQ+
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNV 60
Query: 58 NTKCVTIPR 66
NTKC+TIPR
Sbjct: 61 NTKCITIPR 69
>sp|P84023|SMAD3_CHICK Mothers against decapentaplegic homolog 3 OS=Gallus gallus
GN=SMAD3 PE=2 SV=1
Length = 426
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDG---EDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDP 57
M+S+ PFTPPIVK+LLGWKKG+ E+K+ EKAVKSLVKKLKK+ LDELEKAITTQ+
Sbjct: 1 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNI 60
Query: 58 NTKCVTIPR 66
NTKC+TIPR
Sbjct: 61 NTKCITIPR 69
>sp|Q56I99|SMAD5_CHICK Mothers against decapentaplegic homolog 5 OS=Gallus gallus
GN=SMAD5 PE=2 SV=1
Length = 465
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA+++ +
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q5R6H7|SMAD5_PONAB Mothers against decapentaplegic homolog 5 OS=Pongo abelii
GN=SMAD5 PE=2 SV=1
Length = 465
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA+++ +
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q99717|SMAD5_HUMAN Mothers against decapentaplegic homolog 5 OS=Homo sapiens
GN=SMAD5 PE=1 SV=1
Length = 465
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA+++ +
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q9R1V3|SMAD5_RAT Mothers against decapentaplegic homolog 5 OS=Rattus norvegicus
GN=Smad5 PE=2 SV=1
Length = 465
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA+++ +
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q9JIW5|SMAD9_MOUSE Mothers against decapentaplegic homolog 9 OS=Mus musculus
GN=Smad9 PE=1 SV=2
Length = 430
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
++SLF FT P VK+LLGWK+GD E+K++EKAV SLVKKLKK G +DELE+A++ +
Sbjct: 7 ISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPS 66
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 67 KCVTIPR 73
>sp|O15198|SMAD9_HUMAN Mothers against decapentaplegic homolog 9 OS=Homo sapiens
GN=SMAD9 PE=1 SV=1
Length = 467
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
++SLF FT P VK+LLGWK+GD E+K++EKAV SLVKKLKK G +DELE+A++ +
Sbjct: 7 ISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPS 66
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 67 KCVTIPR 73
>sp|O54835|SMAD9_RAT Mothers against decapentaplegic homolog 9 OS=Rattus norvegicus
GN=Smad9 PE=1 SV=1
Length = 434
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
++SLF FT P VK+LLGWK+GD E+K++EKAV SLVKKLKK G +DELE+A++ +
Sbjct: 7 ISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALSCPGQPS 66
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 67 KCVTIPR 73
>sp|P97454|SMAD5_MOUSE Mothers against decapentaplegic homolog 5 OS=Mus musculus
GN=Smad5 PE=1 SV=2
Length = 465
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA+++ +
Sbjct: 4 MASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q9W7E7|SMAD5_DANRE Mothers against decapentaplegic homolog 5 OS=Danio rerio GN=smad5
PE=2 SV=1
Length = 464
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
M+SLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G +++LEKA+++ +
Sbjct: 4 MSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPGQPS 63
Query: 60 KCVTIPR 66
KCVTIPR
Sbjct: 64 KCVTIPR 70
>sp|Q62432|SMAD2_MOUSE Mothers against decapentaplegic homolog 2 OS=Mus musculus
GN=Smad2 PE=1 SV=2
Length = 467
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 1 MTSLFPFTPPIVKKLLGWKK-------------GDGEDKYSEKAVKSLVKKLKKSNGLDE 47
M+S+ PFTPP+VK+LLGWKK E+K+ EKAVKSLVKKLKK+ LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 48 LEKAITTQDPNTKCVTIP 65
LEKAITTQ+ NTKCVTIP
Sbjct: 61 LEKAITTQNCNTKCVTIP 78
>sp|Q5R7C0|SMAD2_PONAB Mothers against decapentaplegic homolog 2 OS=Pongo abelii
GN=SMAD2 PE=2 SV=1
Length = 467
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 1 MTSLFPFTPPIVKKLLGWKK-------------GDGEDKYSEKAVKSLVKKLKKSNGLDE 47
M+S+ PFTPP+VK+LLGWKK E+K+ EKAVKSLVKKLKK+ LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 48 LEKAITTQDPNTKCVTIP 65
LEKAITTQ+ NTKCVTIP
Sbjct: 61 LEKAITTQNCNTKCVTIP 78
>sp|Q1W668|SMAD2_BOVIN Mothers against decapentaplegic homolog 2 OS=Bos taurus GN=SMAD2
PE=2 SV=1
Length = 467
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 1 MTSLFPFTPPIVKKLLGWKK-------------GDGEDKYSEKAVKSLVKKLKKSNGLDE 47
M+S+ PFTPP+VK+LLGWKK E+K+ EKAVKSLVKKLKK+ LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 48 LEKAITTQDPNTKCVTIP 65
LEKAITTQ+ NTKCVTIP
Sbjct: 61 LEKAITTQNCNTKCVTIP 78
>sp|O70436|SMAD2_RAT Mothers against decapentaplegic homolog 2 OS=Rattus norvegicus
GN=Smad2 PE=2 SV=1
Length = 467
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 1 MTSLFPFTPPIVKKLLGWKK-------------GDGEDKYSEKAVKSLVKKLKKSNGLDE 47
M+S+ PFTPP+VK+LLGWKK E+K+ EKAVKSLVKKLKK+ LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 48 LEKAITTQDPNTKCVTIP 65
LEKAITTQ+ NTKCVTIP
Sbjct: 61 LEKAITTQNCNTKCVTIP 78
>sp|Q15796|SMAD2_HUMAN Mothers against decapentaplegic homolog 2 OS=Homo sapiens
GN=SMAD2 PE=1 SV=1
Length = 467
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/78 (62%), Positives = 57/78 (73%), Gaps = 13/78 (16%)
Query: 1 MTSLFPFTPPIVKKLLGWKK-------------GDGEDKYSEKAVKSLVKKLKKSNGLDE 47
M+S+ PFTPP+VK+LLGWKK E+K+ EKAVKSLVKKLKK+ LDE
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDE 60
Query: 48 LEKAITTQDPNTKCVTIP 65
LEKAITTQ+ NTKCVTIP
Sbjct: 61 LEKAITTQNCNTKCVTIP 78
>sp|Q9I962|SMAD1_COTJA Mothers against decapentaplegic homolog 1 OS=Coturnix coturnix
japonica GN=SMAD1 PE=2 SV=1
Length = 465
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|P97588|SMAD1_RAT Mothers against decapentaplegic homolog 1 OS=Rattus norvegicus
GN=Smad1 PE=1 SV=1
Length = 468
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|Q1JQA2|SMAD1_BOVIN Mothers against decapentaplegic homolog 1 OS=Bos taurus GN=SMAD1
PE=1 SV=1
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|P70340|SMAD1_MOUSE Mothers against decapentaplegic homolog 1 OS=Mus musculus
GN=Smad1 PE=1 SV=2
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|Q15797|SMAD1_HUMAN Mothers against decapentaplegic homolog 1 OS=Homo sapiens
GN=SMAD1 PE=1 SV=1
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELEKA++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|Q9I8V2|SMAD1_DANRE Mothers against decapentaplegic homolog 1 OS=Danio rerio GN=smad1
PE=2 SV=1
Length = 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG-LDELEKAITTQDPNT 59
+TSLF FT P VK+LLGWK+GD E+K++EKAV +LVKKLKK G ++ELE+A++ +
Sbjct: 3 VTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQPS 62
Query: 60 KCVTIPR 66
CVTIPR
Sbjct: 63 NCVTIPR 69
>sp|Q9I9P9|SMAD2_DANRE Mothers against decapentaplegic homolog 2 OS=Danio rerio GN=smad2
PE=2 SV=1
Length = 468
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/79 (60%), Positives = 55/79 (69%), Gaps = 14/79 (17%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGED--------------KYSEKAVKSLVKKLKKSNGLD 46
M+S+ PFTPP+VK+LLGWKK K+ EKAVKSLVKKLKK+ LD
Sbjct: 1 MSSILPFTPPVVKRLLGWKKSASGSSGAGGGGEQNGQEEKWCEKAVKSLVKKLKKTGQLD 60
Query: 47 ELEKAITTQDPNTKCVTIP 65
ELEKAITTQ+ NTKCVTIP
Sbjct: 61 ELEKAITTQNRNTKCVTIP 79
>sp|P45896|SMA3_CAEEL Dwarfin sma-3 OS=Caenorhabditis elegans GN=sma-3 PE=2 SV=1
Length = 393
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 1 MTSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNG----LDELEKAITTQD 56
M L P VKKLLGWK G+ E+K+ EKAV++LVKKLKK N L++LE +
Sbjct: 1 MNGLLHMHGPAVKKLLGWKIGEDEEKWCEKAVEALVKKLKKKNNGCGTLEDLECVLANPC 60
Query: 57 PNTKCVTIPR 66
N++C+TI +
Sbjct: 61 TNSRCITIAK 70
>sp|Q02330|SMA2_CAEEL Dwarfin sma-2 OS=Caenorhabditis elegans GN=sma-2 PE=2 SV=2
Length = 418
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 12 VKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSN--GLDELEKAITTQ-DPNTKCVTIPR 66
+ + L WK+GD ++ +++KA+ +L+KKL K N L+ LE A+ Q T+CVTIPR
Sbjct: 10 ITERLKWKQGDEDENWAKKAIDNLMKKLIKHNKQALENLEFALRCQGQQKTECVTIPR 67
>sp|P45897|SMA4_CAEEL Dwarfin sma-4 OS=Caenorhabditis elegans GN=sma-4 PE=2 SV=1
Length = 570
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 18 WKKGDGEDKYSEKAVKSLVKKLK-KSNGLDELEKAITTQDPN-TKCVTIPRLQFEDLQQS 75
+++G + + KA++SLVKKLK K LD L A+T+ T CVTI R LQ +
Sbjct: 158 YQQGGEDSDFVRKAIESLVKKLKDKRIELDALITAVTSNGKQPTGCVTIQRSLDGRLQVA 217
Query: 76 G 76
G
Sbjct: 218 G 218
>sp|P35346|SSR5_HUMAN Somatostatin receptor type 5 OS=Homo sapiens GN=SSTR5 PE=1 SV=3
Length = 364
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Query: 61 CVTIPRLQFEDLQQSGVCSS----PVALSWGAEY 90
C+++P L F D+Q+ G C++ PV L WGA +
Sbjct: 169 CMSLPLLVFADVQEGGTCNASWPEPVGL-WGAVF 201
>sp|P20814|CP2CD_RAT Cytochrome P450 2C13, male-specific OS=Rattus norvegicus GN=Cyp2c13
PE=1 SV=1
Length = 490
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 16 LGWKKGDGEDKYSEKAVKSLVKKLKKSNG 44
LG KG EDK E+A K LVK+LKK+NG
Sbjct: 134 LGMGKGTIEDKVQEEA-KWLVKELKKTNG 161
>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1
Length = 547
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 2 TSLFPFTPPIVKKLLGWKKGDGEDKYSEKAVKSLVKKLKKSNGLDELEKAITTQDPNTK 60
S+ PF PPIV + D D S + V S L K ELE A+ T+ PN K
Sbjct: 280 VSIGPFVPPIVLAIAKSPIVDSYDLSSVRTVMSGAAPLGK-----ELEDAVRTKFPNAK 333
>sp|P18907|AT1A1_HORSE Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus
caballus GN=ATP1A1 PE=3 SV=1
Length = 1021
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 20 KGDGEDKYSEKAVKSL--VKKLKKSNGLDELEKAITTQD 56
KG G DKY A+ KK KK +DEL+K ++ D
Sbjct: 3 KGGGRDKYEPAAISEHGNKKKAKKERDMDELKKEVSMDD 41
>sp|Q7NQE7|RPOC_CHRVO DNA-directed RNA polymerase subunit beta' OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=rpoC PE=3 SV=1
Length = 1396
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 22 DGEDKYSEK--------AVKSLVKKLKKSNGLDELEKAITTQDPNTKCVTIP-RLQ-FED 71
D ED+Y E+ AVK L+KKL ++ L + + T + +TK I RL+ E
Sbjct: 167 DKEDQYGEEFVAMMGAEAVKELLKKLDLDAEIEGLRRELETTNSDTKIKKIAKRLKVLEA 226
Query: 72 LQQSGV 77
Q+SG+
Sbjct: 227 FQRSGM 232
>sp|Q04628|Y1545_PSEAE Uncharacterized protein PA1545 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1545
PE=4 SV=1
Length = 155
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 30 KAVKSLVKKLKKSNGLDELEKAITTQDPNTKCVTIPRLQFEDLQQ 74
K ++ L KK+++ L EL++A+ + DP K +P LQ E LQQ
Sbjct: 80 KMIRELKKKIEEK--LRELQEAMRSSDPGAKEARVPELQKE-LQQ 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,788,750
Number of Sequences: 539616
Number of extensions: 1254296
Number of successful extensions: 3582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3519
Number of HSP's gapped (non-prelim): 54
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)