Query psy1385
Match_columns 69
No_of_seqs 32 out of 34
Neff 2.4
Searched_HMMs 29240
Date Fri Aug 16 22:01:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vpb_A Hpygo1, pygopus homolog 99.1 1.4E-11 4.7E-16 73.8 2.4 35 35-69 3-37 (65)
2 2xb1_A Pygopus homolog 2, B-ce 98.8 1.9E-09 6.4E-14 68.8 3.0 31 39-69 2-32 (105)
3 1we9_A PHD finger family prote 98.3 4.4E-07 1.5E-11 52.1 3.4 33 36-69 2-34 (64)
4 2kgg_A Histone demethylase jar 98.3 3.7E-07 1.3E-11 51.6 2.8 30 40-69 2-31 (52)
5 1wep_A PHF8; structural genomi 97.7 2.9E-05 9.9E-10 46.4 3.6 31 35-68 8-38 (79)
6 3lqh_A Histone-lysine N-methyl 97.6 2.8E-05 9.5E-10 53.9 2.6 26 43-69 5-33 (183)
7 2k16_A Transcription initiatio 97.6 3.8E-05 1.3E-09 45.0 2.6 33 34-68 12-44 (75)
8 1wee_A PHD finger family prote 97.5 8.8E-05 3E-09 43.6 3.3 30 38-69 14-43 (72)
9 3kqi_A GRC5, PHD finger protei 97.4 0.00012 4E-09 43.5 3.0 31 35-68 6-36 (75)
10 1wem_A Death associated transc 97.3 0.00025 8.6E-09 41.8 3.9 26 40-68 16-41 (76)
11 2ri7_A Nucleosome-remodeling f 97.1 0.00021 7.1E-09 46.7 2.4 29 38-68 6-34 (174)
12 3o70_A PHD finger protein 13; 97.0 0.00069 2.4E-08 40.2 3.3 32 34-69 14-45 (68)
13 1wew_A DNA-binding family prot 96.7 0.0014 4.7E-08 39.2 3.3 27 40-68 16-43 (78)
14 2lv9_A Histone-lysine N-methyl 96.6 0.0019 6.7E-08 40.1 3.8 27 40-69 28-54 (98)
15 3o7a_A PHD finger protein 13 v 96.6 0.0013 4.3E-08 36.7 2.4 23 45-69 8-30 (52)
16 2ku3_A Bromodomain-containing 96.6 0.0026 8.9E-08 38.1 3.8 33 35-68 11-44 (71)
17 1f62_A Transcription factor WS 96.5 0.0016 5.4E-08 35.7 2.2 25 42-68 2-26 (51)
18 2yt5_A Metal-response element- 96.3 0.0039 1.3E-07 35.4 3.5 32 37-69 3-35 (66)
19 2rsd_A E3 SUMO-protein ligase 96.3 0.0035 1.2E-07 36.5 3.0 26 42-69 12-38 (68)
20 2yql_A PHD finger protein 21A; 95.9 0.0075 2.6E-07 33.8 3.3 29 36-69 5-33 (56)
21 2l43_A N-teminal domain from h 95.9 0.0048 1.6E-07 38.0 2.5 31 37-68 22-53 (88)
22 2l5u_A Chromodomain-helicase-D 95.8 0.0098 3.4E-07 34.1 3.6 27 37-68 8-34 (61)
23 2lri_C Autoimmune regulator; Z 95.7 0.0093 3.2E-07 35.2 3.2 24 40-68 12-35 (66)
24 2e6r_A Jumonji/ARID domain-con 95.6 0.011 3.7E-07 36.6 3.3 31 37-69 13-43 (92)
25 1xwh_A Autoimmune regulator; P 95.5 0.012 4.1E-07 34.0 3.0 27 38-69 6-32 (66)
26 3kv5_D JMJC domain-containing 95.3 0.01 3.5E-07 45.9 2.9 32 34-68 32-63 (488)
27 2puy_A PHD finger protein 21A; 94.7 0.024 8.1E-07 32.0 2.7 26 39-69 4-29 (60)
28 2jmi_A Protein YNG1, ING1 homo 94.2 0.029 9.7E-07 35.3 2.6 25 41-69 27-54 (90)
29 3asl_A E3 ubiquitin-protein li 94.2 0.024 8.2E-07 33.5 2.0 25 42-68 20-44 (70)
30 2g6q_A Inhibitor of growth pro 94.1 0.024 8.3E-07 32.9 1.9 22 45-69 15-39 (62)
31 3v43_A Histone acetyltransfera 93.9 0.03 1E-06 34.9 2.2 26 42-68 63-88 (112)
32 2vnf_A ING 4, P29ING4, inhibit 93.9 0.028 9.7E-07 32.2 1.9 23 45-69 14-38 (60)
33 3o36_A Transcription intermedi 93.8 0.042 1.4E-06 36.2 2.8 26 39-69 3-28 (184)
34 2kwj_A Zinc finger protein DPF 93.2 0.054 1.8E-06 34.0 2.5 26 42-69 60-85 (114)
35 3kv4_A PHD finger protein 8; e 93.1 0.039 1.3E-06 42.6 2.1 24 44-68 8-31 (447)
36 3c6w_A P28ING5, inhibitor of g 92.9 0.051 1.8E-06 31.2 1.9 23 45-69 13-37 (59)
37 1x4i_A Inhibitor of growth pro 92.8 0.089 3.1E-06 31.1 2.9 21 45-68 10-33 (70)
38 2e6s_A E3 ubiquitin-protein li 92.8 0.076 2.6E-06 32.0 2.6 27 40-68 26-52 (77)
39 1mm2_A MI2-beta; PHD, zinc fin 92.8 0.053 1.8E-06 31.0 1.8 27 38-69 7-33 (61)
40 2d8s_A Cellular modulator of i 92.4 0.19 6.6E-06 29.9 4.0 36 31-69 6-46 (80)
41 3u5n_A E3 ubiquitin-protein li 92.3 0.054 1.9E-06 36.5 1.7 24 41-69 8-31 (207)
42 4gne_A Histone-lysine N-methyl 92.1 0.12 4.1E-06 33.2 3.1 29 37-69 12-41 (107)
43 1weu_A Inhibitor of growth fam 91.7 0.34 1.1E-05 30.4 4.7 26 41-69 37-64 (91)
44 2ysm_A Myeloid/lymphoid or mix 91.6 0.12 4E-06 31.7 2.5 26 42-69 56-81 (111)
45 1wen_A Inhibitor of growth fam 91.5 0.25 8.5E-06 29.3 3.7 25 42-69 18-44 (71)
46 3shb_A E3 ubiquitin-protein li 90.5 0.14 4.8E-06 31.0 2.1 26 41-68 27-52 (77)
47 2ecm_A Ring finger and CHY zin 90.4 0.34 1.2E-05 25.0 3.3 31 38-69 3-33 (55)
48 3rsn_A SET1/ASH2 histone methy 89.5 0.18 6.1E-06 35.3 2.2 24 44-68 8-31 (177)
49 4bbq_A Lysine-specific demethy 89.4 0.18 6.2E-06 30.8 1.9 26 43-69 62-87 (117)
50 1wev_A Riken cDNA 1110020M19; 88.9 0.3 1E-05 29.6 2.6 29 40-69 16-45 (88)
51 1twf_L ABC10-alpha, DNA-direct 88.8 0.11 3.9E-06 31.4 0.7 28 37-65 25-53 (70)
52 1iym_A EL5; ring-H2 finger, ub 88.3 0.51 1.7E-05 24.4 3.0 31 38-69 3-33 (55)
53 3pur_A Lysine-specific demethy 87.7 0.3 1E-05 39.0 2.7 17 51-68 53-69 (528)
54 3ask_A E3 ubiquitin-protein li 87.2 0.29 9.9E-06 35.2 2.1 27 41-69 175-201 (226)
55 3h0g_L DNA-directed RNA polyme 85.2 0.46 1.6E-05 28.6 1.9 26 38-64 19-45 (63)
56 2l0b_A E3 ubiquitin-protein li 84.3 0.8 2.7E-05 26.7 2.7 40 28-69 28-67 (91)
57 2ro1_A Transcription intermedi 82.7 0.41 1.4E-05 32.2 1.1 23 42-69 4-26 (189)
58 2ep4_A Ring finger protein 24; 82.6 2.2 7.6E-05 23.2 4.0 32 36-69 11-42 (74)
59 1x5w_A Zinc finger protein 64, 82.0 2.2 7.4E-05 22.2 3.6 33 35-68 4-48 (70)
60 2ysm_A Myeloid/lymphoid or mix 80.1 1.7 5.8E-05 26.4 3.1 32 36-69 3-34 (111)
61 1fp0_A KAP-1 corepressor; PHD 79.5 2 6.8E-05 26.8 3.4 30 35-69 20-49 (88)
62 2kiz_A E3 ubiquitin-protein li 79.3 2.4 8.2E-05 22.8 3.3 33 35-69 9-41 (69)
63 2kpi_A Uncharacterized protein 78.0 1.6 5.4E-05 25.0 2.4 31 37-67 7-38 (56)
64 2lce_A B-cell lymphoma 6 prote 77.8 3.4 0.00012 21.7 3.6 35 33-68 10-56 (74)
65 3v43_A Histone acetyltransfera 76.5 2.1 7E-05 26.5 2.8 30 39-69 4-38 (112)
66 2dmd_A Zinc finger protein 64, 76.3 3.2 0.00011 22.4 3.3 32 35-67 31-74 (96)
67 3uk3_C Zinc finger protein 217 74.5 2.9 0.0001 20.6 2.6 29 39-68 3-43 (57)
68 1vd4_A Transcription initiatio 74.4 2.8 9.6E-05 22.0 2.6 32 35-67 9-49 (62)
69 2yt9_A Zinc finger-containing 73.4 3.5 0.00012 22.2 2.9 13 38-50 33-45 (95)
70 2l7p_A Histone-lysine N-methyl 73.3 1.6 5.4E-05 28.1 1.7 16 50-66 22-37 (100)
71 2ect_A Ring finger protein 126 72.9 5.5 0.00019 21.8 3.7 32 36-69 11-42 (78)
72 2ee8_A Protein ODD-skipped-rel 72.8 3.4 0.00012 22.8 2.9 13 38-50 15-27 (106)
73 2wjy_A Regulator of nonsense t 72.2 2.3 7.9E-05 34.1 2.7 27 38-67 4-30 (800)
74 3na7_A HP0958; flagellar bioge 71.6 2.3 7.7E-05 29.4 2.3 26 42-68 200-233 (256)
75 2xzl_A ATP-dependent helicase 71.5 2.3 7.9E-05 34.0 2.6 26 39-67 10-35 (802)
76 1bbo_A Human enhancer-binding 70.9 4.1 0.00014 20.0 2.7 26 41-67 2-39 (57)
77 1x6e_A Zinc finger protein 24; 70.9 6 0.00021 20.6 3.5 33 35-68 9-53 (72)
78 1faq_A RAF-1; transferase, ser 68.9 2.9 0.0001 22.1 1.9 26 40-69 14-39 (52)
79 1x4j_A Ring finger protein 38; 67.9 6.6 0.00023 21.4 3.3 39 28-69 12-50 (75)
80 2ct0_A Non-SMC element 1 homol 66.5 5.8 0.0002 23.5 3.1 28 37-68 12-39 (74)
81 1gyo_A Cytochrome C3, A dimeri 66.0 2.6 9E-05 26.1 1.5 49 13-65 6-57 (109)
82 2dlq_A GLI-kruppel family memb 65.9 4.2 0.00014 22.7 2.2 11 40-50 35-45 (124)
83 4hn5_A Glucocorticoid receptor 65.2 0.82 2.8E-05 29.7 -1.0 34 35-69 24-58 (117)
84 2csh_A Zinc finger protein 297 65.0 6.8 0.00023 21.7 3.0 30 38-68 35-76 (110)
85 2ct1_A Transcriptional repress 63.9 9 0.00031 20.1 3.3 34 34-68 9-56 (77)
86 2ct2_A Tripartite motif protei 63.7 11 0.00038 20.6 3.8 33 35-69 10-43 (88)
87 2adr_A ADR1; transcription reg 63.3 7 0.00024 19.4 2.6 26 41-67 3-40 (60)
88 2kwj_A Zinc finger protein DPF 62.5 5.3 0.00018 24.7 2.4 27 42-69 3-35 (114)
89 2pk7_A Uncharacterized protein 62.3 6.5 0.00022 23.3 2.7 28 39-67 7-36 (69)
90 2ghf_A ZHX1, zinc fingers and 61.1 9.7 0.00033 22.8 3.4 36 31-67 9-60 (102)
91 2kmk_A Zinc finger protein GFI 60.1 6.8 0.00023 20.2 2.3 29 38-67 27-67 (82)
92 3u50_C Telomerase-associated p 59.7 4.4 0.00015 27.6 1.9 23 42-65 44-67 (172)
93 2lv2_A Insulinoma-associated p 59.4 11 0.00038 21.8 3.4 31 37-68 25-67 (85)
94 2cot_A Zinc finger protein 435 58.9 18 0.0006 18.9 3.9 32 36-68 14-57 (77)
95 4ayb_P DNA-directed RNA polyme 58.5 3.2 0.00011 24.2 0.9 20 39-58 2-21 (48)
96 2jr6_A UPF0434 protein NMA0874 58.3 7.2 0.00025 23.1 2.4 28 39-67 7-36 (68)
97 1zu1_A DSRBP-ZFA, RNA binding 58.3 3.1 0.0001 26.2 0.8 18 50-68 87-104 (127)
98 4gzn_C ZFP-57, zinc finger pro 58.1 9.3 0.00032 20.8 2.7 31 37-68 1-43 (60)
99 2jne_A Hypothetical protein YF 57.9 5.9 0.0002 26.0 2.1 26 41-67 33-58 (101)
100 1v87_A Deltex protein 2; ring- 57.3 5.3 0.00018 23.4 1.7 31 39-69 24-67 (114)
101 2eox_A Zinc finger protein 473 57.0 7.6 0.00026 18.2 2.0 15 37-51 9-23 (44)
102 2jny_A Uncharacterized BCR; st 56.7 7.7 0.00026 23.0 2.4 28 39-67 9-38 (67)
103 2en3_A ZFP-95, zinc finger pro 55.6 7.7 0.00026 18.4 1.9 17 36-52 8-24 (46)
104 2ecl_A Ring-box protein 2; RNF 55.6 5 0.00017 22.8 1.3 30 40-69 15-54 (81)
105 1v5n_A PDI-like hypothetical p 55.5 14 0.00047 22.3 3.4 36 25-68 37-72 (89)
106 2el5_A Zinc finger protein 268 55.5 8 0.00027 17.8 1.9 15 37-51 7-21 (42)
107 2han_A Protein ultraspiracle; 55.3 1.6 5.5E-05 27.1 -0.9 34 35-69 5-39 (93)
108 2en2_A B-cell lymphoma 6 prote 55.3 8.1 0.00028 17.8 1.9 15 37-51 8-22 (42)
109 2em3_A Zinc finger protein 28 54.9 8.2 0.00028 18.2 1.9 17 36-52 8-24 (46)
110 1a1h_A QGSR zinc finger peptid 54.5 11 0.00039 19.8 2.6 29 38-67 32-72 (90)
111 2yrj_A Zinc finger protein 473 54.3 8.4 0.00029 18.1 1.9 17 36-52 8-24 (46)
112 2ep3_A Zinc finger protein 484 53.9 8.1 0.00028 18.3 1.8 17 36-52 8-24 (46)
113 2js4_A UPF0434 protein BB2007; 53.8 8.9 0.0003 22.8 2.3 29 38-67 6-36 (70)
114 2eof_A Zinc finger protein 268 53.8 8.1 0.00028 17.9 1.8 16 36-51 8-23 (44)
115 2hf1_A Tetraacyldisaccharide-1 53.2 7.6 0.00026 23.0 1.9 27 40-67 8-36 (68)
116 2epc_A Zinc finger protein 32; 53.1 9.4 0.00032 17.5 1.9 16 37-52 8-23 (42)
117 2d9h_A Zinc finger protein 692 52.8 11 0.00039 19.6 2.4 31 37-68 4-49 (78)
118 1x6h_A Transcriptional repress 52.5 22 0.00074 18.5 3.5 34 34-68 9-58 (86)
119 2em9_A Zinc finger protein 224 52.3 9.5 0.00032 17.9 1.9 16 36-51 8-23 (46)
120 2ebl_A COUP transcription fact 52.2 2.6 9E-05 26.0 -0.3 33 36-69 3-36 (89)
121 2el4_A Zinc finger protein 268 52.1 9.5 0.00032 17.9 1.9 16 36-51 8-23 (46)
122 2yu5_A Zinc finger protein 473 51.9 9.7 0.00033 17.8 1.9 17 36-52 8-24 (44)
123 2ytj_A Zinc finger protein 484 51.2 10 0.00035 17.9 1.9 17 36-52 8-24 (46)
124 2ytf_A Zinc finger protein 268 51.1 10 0.00034 17.8 1.9 16 36-51 8-23 (46)
125 2emi_A Zinc finger protein 484 50.7 11 0.00036 17.8 1.9 16 36-51 8-23 (46)
126 2eow_A Zinc finger protein 347 50.5 10 0.00035 17.8 1.9 17 36-52 8-24 (46)
127 2enn_A NPKC-theta, protein kin 50.0 14 0.00046 21.4 2.7 39 28-69 24-63 (77)
128 2yuu_A NPKC-delta, protein kin 50.0 15 0.0005 21.4 2.8 28 41-69 29-57 (83)
129 1ptq_A Protein kinase C delta 49.9 12 0.0004 19.4 2.2 28 41-69 12-40 (50)
130 2ysp_A Zinc finger protein 224 49.6 12 0.0004 17.7 2.0 16 36-51 8-23 (46)
131 2eoj_A Zinc finger protein 268 49.5 7.9 0.00027 18.0 1.3 15 37-51 9-23 (44)
132 2emy_A Zinc finger protein 268 49.4 11 0.00039 17.7 1.9 16 36-51 8-23 (46)
133 2ea6_A Ring finger protein 4; 49.4 11 0.00038 19.6 2.0 35 35-69 10-46 (69)
134 2yts_A Zinc finger protein 484 49.0 12 0.0004 17.6 1.9 17 35-51 7-23 (46)
135 2emb_A Zinc finger protein 473 48.9 12 0.0004 17.5 1.9 17 36-52 8-24 (44)
136 2e61_A Zinc finger CW-type PWW 48.8 9.6 0.00033 22.7 1.9 17 50-66 12-29 (69)
137 2em7_A Zinc finger protein 224 48.1 12 0.00042 17.6 1.9 16 36-51 8-23 (46)
138 2enz_A NPKC-theta, protein kin 48.0 16 0.00055 20.3 2.7 41 26-69 11-52 (65)
139 1llm_C Chimera of ZIF23-GCN4; 47.7 16 0.00055 19.6 2.6 27 40-67 3-41 (88)
140 2eq0_A Zinc finger protein 347 47.5 13 0.00044 17.5 1.9 16 36-51 8-23 (46)
141 3ng2_A RNF4, snurf, ring finge 47.4 7.7 0.00026 20.5 1.2 34 35-69 5-41 (71)
142 2em5_A ZFP-95, zinc finger pro 47.3 12 0.00041 17.7 1.8 17 35-51 7-23 (46)
143 2en6_A Zinc finger protein 268 47.1 14 0.00048 17.4 2.1 16 36-51 8-23 (46)
144 2emf_A Zinc finger protein 484 46.8 14 0.00049 17.4 2.1 16 36-51 8-23 (46)
145 2eml_A Zinc finger protein 28 46.7 13 0.00043 17.5 1.8 16 36-51 8-23 (46)
146 2a3m_A COG3005: nitrate/TMAO r 46.6 8.3 0.00028 24.3 1.4 39 23-64 35-74 (130)
147 2emp_A Zinc finger protein 347 46.4 14 0.00046 17.4 1.9 16 36-51 8-23 (46)
148 2eoz_A Zinc finger protein 473 45.7 14 0.00048 17.4 2.0 17 36-52 8-24 (46)
149 2emj_A Zinc finger protein 28 45.7 14 0.00047 17.5 1.9 16 36-51 8-23 (46)
150 2ytb_A Zinc finger protein 32; 45.6 7.5 0.00026 17.9 0.9 17 36-52 7-23 (42)
151 2eps_A POZ-, at HOOK-, and zin 45.6 10 0.00035 18.9 1.4 32 35-67 7-51 (54)
152 2em4_A Zinc finger protein 28 45.1 15 0.0005 17.4 1.9 16 36-51 8-23 (46)
153 2ytk_A Zinc finger protein 347 44.9 14 0.00048 17.4 1.9 16 36-51 8-23 (46)
154 1y8f_A UNC-13 homolog A, MUNC1 44.7 18 0.0006 20.2 2.5 28 41-69 25-53 (66)
155 2co8_A NEDD9 interacting prote 44.4 24 0.00083 19.8 3.1 24 38-61 40-70 (82)
156 2el6_A Zinc finger protein 268 44.4 15 0.0005 17.4 1.9 16 36-51 8-23 (46)
157 2ema_A Zinc finger protein 347 44.0 16 0.00055 17.1 2.0 16 36-51 8-23 (46)
158 2epw_A Zinc finger protein 268 44.0 15 0.00052 17.1 1.9 17 36-52 8-24 (46)
159 2emh_A Zinc finger protein 484 43.9 14 0.00049 17.3 1.8 17 36-52 8-24 (46)
160 2ysl_A Tripartite motif-contai 43.9 30 0.001 18.3 3.3 29 35-68 15-43 (73)
161 2ytp_A Zinc finger protein 484 43.8 16 0.00055 17.2 2.0 17 35-51 7-23 (46)
162 2yte_A Zinc finger protein 473 43.8 8.8 0.0003 17.6 1.0 17 36-52 6-22 (42)
163 2eme_A Zinc finger protein 473 43.8 15 0.0005 17.2 1.8 18 35-52 7-24 (46)
164 2elz_A Zinc finger protein 224 43.6 8.9 0.00031 18.2 1.0 18 35-52 7-24 (46)
165 1x4k_A Skeletal muscle LIM-pro 43.4 21 0.00073 19.0 2.6 20 42-61 7-26 (72)
166 2eon_A ZFP-95, zinc finger pro 43.3 9.2 0.00032 18.2 1.0 18 35-52 7-24 (46)
167 2eli_A Protein kinase C alpha 43.3 22 0.00076 20.9 2.9 29 40-69 28-57 (85)
168 2epu_A Zinc finger protein 32; 43.1 16 0.00056 17.1 1.9 16 36-51 8-23 (45)
169 3ky9_A Proto-oncogene VAV; cal 43.1 17 0.00057 27.4 2.8 29 40-69 529-558 (587)
170 2eoo_A ZFP-95, zinc finger pro 43.0 16 0.00055 17.2 1.9 17 36-52 8-24 (46)
171 2epv_A Zinc finger protein 268 42.9 16 0.00055 17.1 1.9 16 36-51 8-23 (44)
172 1wjp_A Zinc finger protein 295 42.9 12 0.00039 20.8 1.5 11 40-50 16-26 (107)
173 2gqj_A Zinc finger protein KIA 42.9 2.6 9E-05 23.7 -1.2 34 34-68 18-65 (98)
174 2fnf_X Putative RAS effector N 42.3 19 0.00064 20.9 2.4 26 41-69 36-61 (72)
175 2ytg_A ZFP-95, zinc finger pro 42.0 16 0.00055 17.1 1.8 17 36-52 8-24 (46)
176 2yso_A ZFP-95, zinc finger pro 42.0 18 0.0006 17.0 1.9 17 36-52 8-24 (46)
177 1dxg_A Desulforedoxin; non-hem 42.0 19 0.00066 18.5 2.2 24 37-60 3-29 (36)
178 2emm_A ZFP-95, zinc finger pro 41.9 17 0.00058 17.0 1.9 17 36-52 8-24 (46)
179 2ep2_A Zinc finger protein 484 41.9 17 0.00059 17.0 1.9 17 36-52 8-24 (46)
180 2ecv_A Tripartite motif-contai 41.8 36 0.0012 18.1 3.4 28 37-69 16-43 (85)
181 2ytd_A Zinc finger protein 473 41.5 17 0.00059 17.0 1.9 17 36-52 8-24 (46)
182 2eoy_A Zinc finger protein 473 41.4 18 0.00061 17.0 1.9 18 35-52 7-24 (46)
183 3uej_A NPKC-delta, protein kin 41.3 18 0.00062 20.0 2.2 29 40-69 20-49 (65)
184 2en8_A Zinc finger protein 224 41.2 17 0.00057 17.0 1.8 18 35-52 7-24 (46)
185 2enf_A Zinc finger protein 347 41.1 9.8 0.00034 17.9 0.9 18 35-52 7-24 (46)
186 2yto_A Zinc finger protein 484 41.1 18 0.00062 17.0 1.9 17 36-52 8-24 (46)
187 2d8t_A Dactylidin, ring finger 40.9 31 0.0011 18.5 3.1 29 35-68 10-38 (71)
188 1l1o_C Replication protein A 7 40.9 15 0.00051 24.2 2.0 23 42-65 45-70 (181)
189 1zfo_A LAsp-1; LIM domain, zin 40.5 7.8 0.00027 19.3 0.5 19 42-61 5-23 (31)
190 2a66_A Orphan nuclear receptor 40.5 3.8 0.00013 26.3 -0.9 33 36-69 5-38 (113)
191 2em2_A Zinc finger protein 28 40.4 19 0.00063 17.0 1.9 18 35-52 7-24 (46)
192 2en1_A Zinc finger protein 224 40.3 18 0.00062 16.9 1.8 17 35-51 7-23 (46)
193 2ytn_A Zinc finger protein 347 40.2 10 0.00035 17.9 0.9 18 35-52 7-24 (46)
194 1p91_A Ribosomal RNA large sub 40.1 16 0.00056 23.3 2.1 25 41-66 3-27 (269)
195 2eq3_A Zinc finger protein 347 40.1 12 0.00041 17.5 1.1 17 36-52 8-24 (46)
196 2emg_A Zinc finger protein 484 39.8 11 0.00038 17.8 1.0 17 36-52 8-24 (46)
197 2em0_A Zinc finger protein 224 39.6 11 0.00036 17.8 0.9 17 36-52 8-24 (46)
198 2eos_A B-cell lymphoma 6 prote 39.3 12 0.00042 17.2 1.1 17 36-52 7-23 (42)
199 2ene_A Zinc finger protein 347 39.2 20 0.00069 16.8 1.9 16 36-51 8-23 (46)
200 2yu8_A Zinc finger protein 347 39.2 19 0.00065 16.8 1.8 18 35-52 7-24 (46)
201 4gat_A Nitrogen regulatory pro 39.1 13 0.00044 22.1 1.4 31 36-67 5-40 (66)
202 2db6_A SH3 and cysteine rich d 39.1 11 0.00036 21.8 1.0 29 40-69 28-57 (74)
203 1x64_A Alpha-actinin-2 associa 39.1 40 0.0014 18.9 3.5 15 38-52 23-37 (89)
204 1dsz_B RXR-alpha, retinoic aci 39.1 3.8 0.00013 24.9 -1.0 32 37-69 2-34 (85)
205 3dpl_R Ring-box protein 1; ubi 38.9 12 0.00043 22.9 1.3 30 40-69 37-79 (106)
206 2epz_A Zinc finger protein 28 38.9 11 0.00038 17.7 0.9 18 35-52 7-24 (46)
207 2ep1_A Zinc finger protein 484 38.8 9.3 0.00032 17.9 0.6 16 36-51 8-23 (46)
208 2em6_A Zinc finger protein 224 38.7 12 0.0004 17.7 1.0 17 35-51 7-23 (46)
209 2eor_A Zinc finger protein 224 38.6 20 0.00069 16.7 1.9 16 36-51 8-23 (46)
210 3nw0_A Non-structural maintena 38.5 16 0.00055 25.4 2.0 27 39-69 179-205 (238)
211 2iyb_E Testin, TESS, TES; LIM 38.5 26 0.0009 18.7 2.5 19 42-60 4-22 (65)
212 2i13_A AART; DNA binding, zinc 38.5 12 0.00041 22.7 1.2 8 41-48 22-29 (190)
213 2ysj_A Tripartite motif-contai 38.0 42 0.0014 17.4 3.3 28 36-68 16-43 (63)
214 2emx_A Zinc finger protein 268 38.0 23 0.00079 16.4 2.0 17 36-52 6-22 (44)
215 2ely_A Zinc finger protein 224 37.6 12 0.00043 17.6 1.0 18 35-52 7-24 (46)
216 2eq4_A Zinc finger protein 224 37.2 13 0.00045 17.4 1.0 18 35-52 7-24 (46)
217 2els_A Zinc finger protein 406 37.2 20 0.0007 15.8 1.7 17 36-52 5-21 (36)
218 2ytq_A Zinc finger protein 268 37.2 13 0.00046 17.5 1.0 17 36-52 8-24 (46)
219 2eov_A Zinc finger protein 484 37.2 13 0.00045 17.4 1.0 17 36-52 8-24 (46)
220 1g47_A Pinch protein; LIM doma 37.2 49 0.0017 17.7 3.5 23 39-61 38-65 (77)
221 2eop_A Zinc finger protein 268 37.1 13 0.00043 17.4 0.9 18 35-52 7-24 (46)
222 2emz_A ZFP-95, zinc finger pro 37.1 11 0.00037 17.8 0.7 18 35-52 7-24 (46)
223 3dzy_A Retinoic acid receptor 36.9 3.4 0.00012 31.1 -1.8 29 40-69 137-166 (467)
224 2jrp_A Putative cytoplasmic pr 36.7 23 0.0008 21.9 2.3 23 42-65 4-26 (81)
225 2enh_A Zinc finger protein 28 36.5 13 0.00046 17.5 1.0 18 35-52 7-24 (46)
226 2eoh_A Zinc finger protein 28 36.2 12 0.00042 17.6 0.8 18 35-52 7-24 (46)
227 2eq1_A Zinc finger protein 347 36.1 13 0.00044 17.5 0.9 17 36-52 8-24 (46)
228 1wyh_A SLIM 2, skeletal muscle 36.1 25 0.00085 18.7 2.2 19 42-60 7-25 (72)
229 2l9z_A PR domain zinc finger p 36.0 21 0.0007 20.0 1.8 19 48-67 3-21 (39)
230 3g9m_A Glucocorticoid receptor 35.9 3.4 0.00012 25.2 -1.6 28 41-69 3-31 (90)
231 2em8_A Zinc finger protein 224 35.9 24 0.00084 16.5 1.9 18 35-52 7-24 (46)
232 3ray_A PR domain-containing pr 35.8 14 0.00047 26.6 1.3 14 53-67 27-40 (237)
233 4a0k_B E3 ubiquitin-protein li 35.8 7.7 0.00026 24.6 0.0 29 41-69 49-90 (117)
234 1p7a_A BF3, BKLF, kruppel-like 35.8 25 0.00086 15.4 1.9 18 35-52 6-23 (37)
235 2emk_A Zinc finger protein 28 35.6 14 0.00048 17.5 1.0 17 36-52 8-24 (46)
236 2xeu_A Ring finger protein 4; 35.6 12 0.00041 19.2 0.8 30 39-69 2-34 (64)
237 1r4i_A Androgen receptor; AR, 35.4 5.9 0.0002 25.0 -0.6 31 38-69 5-36 (105)
238 2eoe_A Zinc finger protein 347 35.2 15 0.00053 17.1 1.1 17 35-51 7-23 (46)
239 2lq6_A Bromodomain-containing 35.0 49 0.0017 19.8 3.6 32 35-68 12-44 (87)
240 2ytr_A Zinc finger protein 347 34.9 9.9 0.00034 17.9 0.3 18 35-52 7-24 (46)
241 2ctu_A Zinc finger protein 483 34.8 32 0.0011 17.1 2.4 34 33-67 11-49 (73)
242 2en9_A Zinc finger protein 28 34.7 16 0.00054 17.2 1.1 17 35-51 7-23 (46)
243 2en7_A Zinc finger protein 268 34.5 13 0.00043 17.2 0.7 17 36-52 8-24 (44)
244 2ep0_A Zinc finger protein 28 34.1 26 0.00091 16.3 1.9 18 35-52 7-24 (46)
245 1x61_A Thyroid receptor intera 34.1 45 0.0015 17.7 3.0 41 20-61 14-59 (72)
246 2elr_A Zinc finger protein 406 34.0 31 0.0011 14.9 2.0 17 36-52 5-21 (36)
247 2l6l_A DNAJ homolog subfamily 33.8 10 0.00035 23.9 0.4 13 55-68 132-144 (155)
248 2eoq_A Zinc finger protein 224 33.7 14 0.00047 17.4 0.8 17 36-52 8-24 (46)
249 1kbe_A Kinase suppressor of RA 33.5 30 0.001 19.1 2.3 25 41-69 15-39 (49)
250 1t1h_A Gspef-atpub14, armadill 33.5 36 0.0012 18.3 2.6 27 37-68 5-31 (78)
251 2yth_A Zinc finger protein 224 33.5 16 0.00055 17.2 1.0 18 35-52 7-24 (46)
252 1lo1_A Steroid hormone recepto 33.4 5.5 0.00019 24.9 -1.0 30 39-69 3-33 (98)
253 3gj3_B Nuclear pore complex pr 33.3 15 0.00051 19.2 0.9 28 35-65 2-29 (33)
254 2egq_A FHL1 protein; LIM domai 33.3 37 0.0013 18.3 2.6 20 42-61 17-39 (77)
255 3ov0_A Cytochrome C family pro 33.2 16 0.00055 26.2 1.3 28 25-52 13-40 (318)
256 2epx_A Zinc finger protein 28 33.2 16 0.00056 17.0 1.0 17 35-51 7-23 (47)
257 2yur_A Retinoblastoma-binding 33.1 57 0.002 17.6 3.4 30 35-69 10-40 (74)
258 1rfh_A RAS association (ralgds 32.8 21 0.00071 19.7 1.5 25 41-68 23-47 (59)
259 2enc_A Zinc finger protein 224 32.8 28 0.00095 16.2 1.8 18 35-52 7-24 (46)
260 2eou_A Zinc finger protein 473 32.6 16 0.00055 17.0 0.9 18 35-52 7-24 (44)
261 2cy3_A Cytochrome C3; electron 32.2 14 0.00049 23.3 0.9 41 21-64 25-67 (118)
262 2vrw_B P95VAV, VAV1, proto-onc 32.1 30 0.001 24.3 2.6 30 39-69 356-386 (406)
263 3f6q_B LIM and senescent cell 32.0 37 0.0013 17.7 2.4 21 41-61 12-32 (72)
264 1znf_A 31ST zinc finger from X 31.8 17 0.00057 14.8 0.8 12 41-52 2-13 (27)
265 2elt_A Zinc finger protein 406 31.6 29 0.00098 15.1 1.7 16 36-51 5-20 (36)
266 2epa_A Krueppel-like factor 10 31.6 55 0.0019 16.6 3.4 33 36-68 13-60 (72)
267 1x62_A C-terminal LIM domain p 30.9 69 0.0024 17.5 3.8 13 40-52 15-27 (79)
268 1x63_A Skeletal muscle LIM-pro 30.8 45 0.0015 18.2 2.7 20 42-61 17-36 (82)
269 2elx_A Zinc finger protein 406 30.6 29 0.00099 14.9 1.6 15 38-52 5-19 (35)
270 1czj_A Cytochrome C3; octaheme 30.5 8.1 0.00028 24.3 -0.6 39 23-64 21-60 (111)
271 2csy_A Zinc finger protein 183 30.4 63 0.0021 17.6 3.3 27 37-68 12-38 (81)
272 2epr_A POZ-, at HOOK-, and zin 30.3 6.5 0.00022 19.0 -0.8 16 35-50 7-22 (48)
273 1x4l_A Skeletal muscle LIM-pro 30.3 52 0.0018 17.5 2.9 25 37-61 32-61 (72)
274 2elo_A Zinc finger protein 406 30.2 26 0.00089 15.4 1.4 17 36-52 5-21 (37)
275 2ecn_A Ring finger protein 141 30.1 46 0.0016 17.5 2.6 27 36-68 11-37 (70)
276 1vyx_A ORF K3, K3RING; zinc-bi 30.0 16 0.00056 20.3 0.7 11 39-49 5-15 (60)
277 2eq2_A Zinc finger protein 347 29.6 16 0.00054 17.1 0.6 18 35-52 7-24 (46)
278 2ept_A Zinc finger protein 32; 29.3 35 0.0012 15.4 1.8 18 35-52 5-22 (41)
279 2han_B Ecdysone receptor; tran 29.2 9.5 0.00032 24.5 -0.4 30 39-69 7-37 (119)
280 2elm_A Zinc finger protein 406 29.2 25 0.00087 15.8 1.3 15 37-51 6-20 (37)
281 3gxe_F Collagen alpha-1(I) cha 29.2 22 0.00074 17.5 1.0 12 3-14 3-14 (23)
282 2d8x_A Protein pinch; LIM doma 29.1 25 0.00085 18.8 1.4 24 38-61 29-57 (70)
283 2ehe_A Four and A half LIM dom 28.4 43 0.0015 18.3 2.3 25 37-61 40-69 (82)
284 2elv_A Zinc finger protein 406 28.3 35 0.0012 14.9 1.6 15 37-51 6-20 (36)
285 1ard_A Yeast transcription fac 28.1 22 0.00074 14.5 0.8 13 40-52 2-14 (29)
286 2ytm_A Zinc finger protein 28 28.0 18 0.00062 17.1 0.6 18 35-52 7-24 (46)
287 1pft_A TFIIB, PFTFIIBN; N-term 27.6 54 0.0018 17.2 2.6 22 40-61 5-29 (50)
288 1f2i_G Fusion of N-terminal 17 27.4 67 0.0023 16.2 3.1 31 37-68 16-60 (73)
289 1srk_A Zinc finger protein ZFP 27.3 30 0.001 15.0 1.3 15 38-52 5-19 (35)
290 1paa_A Yeast transcription fac 27.2 23 0.00079 14.6 0.8 13 40-52 2-14 (30)
291 1cit_A NGFI-B, protein (orphan 27.1 7.6 0.00026 23.8 -1.1 27 42-69 2-29 (89)
292 2eom_A ZFP-95, zinc finger pro 26.9 45 0.0015 15.6 2.0 18 35-52 7-24 (46)
293 1rwj_A Cytochrome C family pro 26.7 4 0.00014 24.5 -2.4 24 25-50 16-39 (82)
294 4gop_C Putative uncharacterize 26.7 28 0.00097 25.3 1.7 24 42-66 310-336 (444)
295 2dkt_A Ring finger and CHY zin 26.6 16 0.00054 24.7 0.3 23 39-61 35-63 (143)
296 2elp_A Zinc finger protein 406 26.1 40 0.0014 14.8 1.7 16 37-52 6-21 (37)
297 1yop_A KTI11P; zinc finger, me 26.0 27 0.00091 21.5 1.3 26 40-67 23-55 (83)
298 2jp9_A Wilms tumor 1; DNA bind 25.9 85 0.0029 17.0 3.3 14 54-67 34-48 (119)
299 3h4n_A Cytochrome C7, cytochro 25.8 32 0.0011 19.7 1.5 27 25-52 11-37 (72)
300 1rik_A E6APC1 peptide; E6-bind 25.6 23 0.00077 14.5 0.7 13 40-52 2-14 (29)
301 1x68_A FHL5 protein; four-and- 25.4 50 0.0017 17.9 2.2 20 42-61 7-28 (76)
302 1yui_A GAGA-factor; complex (D 25.1 29 0.001 17.0 1.1 14 38-51 22-35 (54)
303 1hcq_A Protein (estrogen recep 25.1 11 0.00039 22.7 -0.6 29 40-69 4-33 (84)
304 2m0f_A Zinc finger and BTB dom 25.0 23 0.00078 14.3 0.6 12 40-51 2-13 (29)
305 2gag_D Heterotetrameric sarcos 25.0 24 0.00081 22.7 0.9 9 60-68 60-68 (99)
306 2yti_A Zinc finger protein 347 24.9 51 0.0017 15.2 2.0 17 35-51 7-23 (46)
307 1ehj_A Cytochrome C7; multi-he 24.8 11 0.00036 21.7 -0.7 10 42-51 48-57 (68)
308 1klr_A Zinc finger Y-chromosom 24.8 32 0.0011 13.9 1.1 13 40-52 2-14 (30)
309 2lvu_A Zinc finger and BTB dom 30.4 16 0.00054 14.9 0.0 13 40-52 2-14 (26)
310 2ctd_A Zinc finger protein 512 24.4 31 0.0011 19.6 1.3 29 38-67 32-72 (96)
311 2elq_A Zinc finger protein 406 24.3 41 0.0014 14.7 1.5 16 37-52 6-21 (36)
312 2jr7_A DPH3 homolog; DESR1, CS 24.2 39 0.0013 21.2 1.8 26 40-67 23-55 (89)
313 2epq_A POZ-, at HOOK-, and zin 24.1 34 0.0012 15.9 1.2 17 35-51 5-21 (45)
314 2dj7_A Actin-binding LIM prote 24.1 44 0.0015 18.8 1.9 24 38-61 40-67 (80)
315 2ytt_A Zinc finger protein 473 24.0 51 0.0018 15.3 1.9 18 35-52 7-24 (46)
316 2dlk_A Novel protein; ZF-C2H2 23.9 8 0.00027 20.1 -1.3 30 37-67 35-78 (79)
317 2lcq_A Putative toxin VAPC6; P 23.9 21 0.00073 22.6 0.5 24 40-64 132-155 (165)
318 2j7j_A Transcription factor II 23.5 63 0.0021 16.4 2.3 12 40-51 31-44 (85)
319 1wim_A KIAA0161 protein; ring 23.5 34 0.0012 19.5 1.3 17 37-53 2-18 (94)
320 2kvf_A Zinc finger and BTB dom 23.2 33 0.0011 13.9 1.0 12 40-51 3-14 (28)
321 2m0d_A Zinc finger and BTB dom 23.2 31 0.0011 13.9 0.9 12 40-51 3-14 (30)
322 2m0e_A Zinc finger and BTB dom 23.2 31 0.0011 13.8 0.9 13 40-52 2-14 (29)
323 1wge_A Hypothetical protein 26 23.0 56 0.0019 20.0 2.3 27 39-67 29-62 (83)
324 3dmo_A Cytidine deaminase; str 22.8 11 0.00039 24.8 -1.0 15 38-52 91-105 (138)
325 1ubd_C Protein (YY1 zinc finge 22.7 81 0.0028 17.4 2.8 30 38-67 32-74 (124)
326 2lt7_A Transcriptional regulat 22.7 48 0.0016 20.1 2.0 13 54-67 76-88 (133)
327 1wad_A Cytochrome C3; electron 22.7 32 0.0011 21.8 1.2 37 24-64 18-55 (112)
328 1j0p_A Cytochrome C3; high res 22.6 27 0.00092 21.8 0.8 39 23-64 14-53 (108)
329 2ckl_B Ubiquitin ligase protei 22.3 45 0.0015 20.7 1.8 27 39-69 53-79 (165)
330 3cbb_A HNF-4-alpha, hepatocyte 22.3 10 0.00035 22.6 -1.2 27 42-69 2-29 (78)
331 1a6y_A Orphan nuclear receptor 22.1 11 0.00038 23.2 -1.0 29 40-69 7-36 (94)
332 2cup_A Skeletal muscle LIM-pro 22.0 1.1E+02 0.0039 17.0 3.4 24 38-61 31-59 (101)
333 2kfq_A FP1; protein, de novo p 21.8 33 0.0011 14.9 0.9 12 40-51 2-13 (32)
334 2kdx_A HYPA, hydrogenase/ureas 21.7 27 0.00091 21.5 0.7 27 38-65 71-98 (119)
335 2i5o_A DNA polymerase ETA; zin 21.7 28 0.00096 18.8 0.7 19 35-53 4-22 (39)
336 2kvh_A Zinc finger and BTB dom 21.5 37 0.0013 13.8 1.0 13 40-52 3-15 (27)
337 3l11_A E3 ubiquitin-protein li 21.5 29 0.001 20.2 0.8 18 35-52 10-27 (115)
338 2wbs_A Krueppel-like factor 4; 21.2 90 0.0031 16.0 2.7 32 35-67 30-75 (89)
339 1wig_A KIAA1808 protein; LIM d 21.0 54 0.0018 17.9 1.8 27 36-63 27-59 (73)
340 2drp_A Protein (tramtrack DNA- 20.9 40 0.0014 16.7 1.2 30 38-68 8-51 (66)
341 4dgw_A PRE-mRNA-splicing facto 20.7 33 0.0011 26.2 1.1 14 53-67 289-302 (402)
342 1ft5_A Cytochrome C554; heme-s 20.4 16 0.00054 24.9 -0.7 27 38-65 55-93 (211)
343 2rpc_A Zinc finger protein ZIC 20.1 1.4E+02 0.0047 17.2 3.7 28 41-68 63-103 (155)
344 1vq8_Z 50S ribosomal protein L 20.0 47 0.0016 20.2 1.5 26 39-65 26-53 (83)
No 1
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.14 E-value=1.4e-11 Score=73.76 Aligned_cols=35 Identities=54% Similarity=1.376 Sum_probs=27.8
Q ss_pred CCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.+++++++|++|++.+.|++..|.|+++|+.|||+
T Consensus 3 ~~~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~ 37 (65)
T 2vpb_A 3 SSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHR 37 (65)
T ss_dssp ------CBCTTTCSBCCTTSCEEEBTTTTCCEEEH
T ss_pred CCCCCcCcCccCCCccCCCCCeEecccCccccCch
Confidence 46889999999999999999999999779999996
No 2
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.82 E-value=1.9e-09 Score=68.77 Aligned_cols=31 Identities=55% Similarity=1.380 Sum_probs=28.9
Q ss_pred CCccccccccccccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
++|+|++|++.+.|+++.|.|+.+|+.|||.
T Consensus 2 ~~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~ 32 (105)
T 2xb1_A 2 LVYPCGACRSEVNDDQDAILCEASCQKWFHR 32 (105)
T ss_dssp CCCBCTTTCSBCCTTSCEEECTTTTCCEEEG
T ss_pred CcCCCCCCCCccCCCCCEEEecCCccccccc
Confidence 5899999999999999999999779999995
No 3
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.32 E-value=4.4e-07 Score=52.10 Aligned_cols=33 Identities=24% Similarity=0.737 Sum_probs=28.0
Q ss_pred CCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
++.....|++|++...|++..|.|+. |+.|||.
T Consensus 2 s~~e~~~C~~C~~~~~~~~~mI~Cd~-C~~WfH~ 34 (64)
T 1we9_A 2 SSGSSGQCGACGESYAADEFWICCDL-CEMWFHG 34 (64)
T ss_dssp CCSSCCCCSSSCCCCCSSSCEEECSS-SCCEEET
T ss_pred CCCCCCCCCCCCCccCCCCCEEEccC-CCCCCCc
Confidence 35566779999998888889999996 9999994
No 4
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.31 E-value=3.7e-07 Score=51.55 Aligned_cols=30 Identities=23% Similarity=0.825 Sum_probs=26.6
Q ss_pred CccccccccccccCCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
+-+|++|.+...|++..|.|++.|+.|||.
T Consensus 2 ~c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~ 31 (52)
T 2kgg_A 2 VCAAQNCQRPCKDKVDWVQCDGGCDEWFHQ 31 (52)
T ss_dssp CCSCTTCCCCCCTTCCEEECTTTTCCEEET
T ss_pred cccCCCCcCccCCCCcEEEeCCCCCccCcc
Confidence 458999999998889999999669999994
No 5
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.73 E-value=2.9e-05 Score=46.44 Aligned_cols=31 Identities=29% Similarity=0.715 Sum_probs=25.2
Q ss_pred CCCCCCccccccccccccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.+....|. +|++...++...|.|+. |+.|||
T Consensus 8 ~~~~~~~C--~C~~~~d~~~~MIqCd~-C~~WfH 38 (79)
T 1wep_A 8 MALVPVYC--LCRQPYNVNHFMIECGL-CQDWFH 38 (79)
T ss_dssp CCCCCCCS--TTSCSCCSSSCEEEBTT-TCCEEE
T ss_pred ccCCccEE--EcCCccCCCCceEEcCC-CCCcEE
Confidence 34555664 99998877889999997 999999
No 6
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.61 E-value=2.8e-05 Score=53.86 Aligned_cols=26 Identities=35% Similarity=0.953 Sum_probs=23.6
Q ss_pred ccccccccccCCc---eEEecccccceeeC
Q psy1385 43 CGICHKEVHDNDQ---AILCESGCNFWYHR 69 (69)
Q Consensus 43 CG~C~~eV~D~dd---AI~CE~~C~~WFHR 69 (69)
|++|.+-..++|. .|.|+. |+.|||.
T Consensus 5 CpiC~k~Y~~~~~~~~MIqCd~-C~~W~H~ 33 (183)
T 3lqh_A 5 CPLCDKCYDDDDYESKMMQCGK-CDRWVHS 33 (183)
T ss_dssp CTTTCCBCTTCCTTCCEEECTT-TCCEEEG
T ss_pred CCCCcCccCCcccCCCeEECCC-CCcccch
Confidence 9999999998874 999997 9999993
No 7
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.58 E-value=3.8e-05 Score=45.03 Aligned_cols=33 Identities=33% Similarity=0.779 Sum_probs=26.0
Q ss_pred CCCCCCCccccccccccccCCceEEecccccceee
Q psy1385 34 NPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.........|.+|++.- |.+..|+|+. |+.|||
T Consensus 12 ~~~~~~~~~C~~C~~~~-~~~~mi~CD~-C~~wfH 44 (75)
T 2k16_A 12 DEWGNQIWICPGCNKPD-DGSPMIGCDD-CDDWYH 44 (75)
T ss_dssp CSSSCEEECBTTTTBCC-SSCCEEECSS-SSSEEE
T ss_pred cccCCCCcCCCCCCCCC-CCCCEEEcCC-CCcccc
Confidence 34455667799998764 5568999997 999999
No 8
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.49 E-value=8.8e-05 Score=43.64 Aligned_cols=30 Identities=23% Similarity=0.701 Sum_probs=23.1
Q ss_pred CCCccccccccccccCCceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
....-| +|++...|.+..|.|+. |+.|||-
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~-C~~W~H~ 43 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDG-CGVWHHT 43 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSS-SCEEEET
T ss_pred CcceEe-eCCCccCCCCcEEECCC-CCCccCC
Confidence 344557 79887655567999997 9999994
No 9
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.38 E-value=0.00012 Score=43.52 Aligned_cols=31 Identities=26% Similarity=0.720 Sum_probs=24.3
Q ss_pred CCCCCCccccccccccccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.++..+|. +|++...+++..|.|+. |+.|||
T Consensus 6 ~~~~~~yC--iC~~~~~~~~~MI~Cd~-C~~WfH 36 (75)
T 3kqi_A 6 MATVPVYC--VCRLPYDVTRFMIECDA-CKDWFH 36 (75)
T ss_dssp TCCCCEET--TTTEECCTTSCEEECTT-TCCEEE
T ss_pred CCCCeeEE--ECCCcCCCCCCEEEcCC-CCCCEe
Confidence 44555553 89877666789999997 999999
No 10
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.31 E-value=0.00025 Score=41.80 Aligned_cols=26 Identities=35% Similarity=0.966 Sum_probs=20.3
Q ss_pred CccccccccccccCCceEEecccccceee
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
..-| +|++.. +++..|.|+. |+.|||
T Consensus 16 ~~~C-~C~~~~-~~~~MI~Cd~-C~~WfH 41 (76)
T 1wem_A 16 ALYC-ICRQPH-NNRFMICCDR-CEEWFH 41 (76)
T ss_dssp CCCS-TTCCCC-CSSCEEECSS-SCCEEE
T ss_pred CCEE-ECCCcc-CCCCEEEeCC-CCCcEe
Confidence 3445 898754 4568999997 999999
No 11
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.14 E-value=0.00021 Score=46.66 Aligned_cols=29 Identities=31% Similarity=0.803 Sum_probs=23.0
Q ss_pred CCCccccccccccccCCceEEecccccceee
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
....-| +|++...++...|.|+. |..|||
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~-C~~WfH 34 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDR-CQNWYH 34 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTT-TCCEEE
T ss_pred CCCcEe-eCCCCCCCCCCEeECCC-CCchhC
Confidence 344457 99987666778999996 999999
No 12
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.96 E-value=0.00069 Score=40.19 Aligned_cols=32 Identities=25% Similarity=0.560 Sum_probs=22.6
Q ss_pred CCCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 34 NPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
+.++..+| | +|++. .|++.-|.|+. |+.|||-
T Consensus 14 ~~~~~~~~-C-iC~~~-~~~~~MIqCd~-C~~WfH~ 45 (68)
T 3o70_A 14 LYFQGLVT-C-FCMKP-FAGRPMIECNE-CHTWIHL 45 (68)
T ss_dssp CTTTTCCC-S-TTCCC-CTTCCEEECTT-TCCEEET
T ss_pred CCCCCceE-e-ECCCc-CCCCCEEECCC-CCccccc
Confidence 34444444 5 99874 34556999998 9999993
No 13
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.71 E-value=0.0014 Score=39.19 Aligned_cols=27 Identities=33% Similarity=0.930 Sum_probs=21.0
Q ss_pred CccccccccccccCCceEEecc-cccceee
Q psy1385 40 IYPCGICHKEVHDNDQAILCES-GCNFWYH 68 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~-~C~~WFH 68 (69)
..-| +|++. .++...|.|+. .|+.|||
T Consensus 16 ~~~C-iC~~~-~~~g~MI~CD~~~C~~W~H 43 (78)
T 1wew_A 16 KVRC-VCGNS-LETDSMIQCEDPRCHVWQH 43 (78)
T ss_dssp CCCC-SSCCC-CCCSCEEECSSTTTCCEEE
T ss_pred CEEe-ECCCc-CCCCCEEEECCccCCcccc
Confidence 3445 89887 46678999993 3999999
No 14
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=96.65 E-value=0.0019 Score=40.14 Aligned_cols=27 Identities=37% Similarity=0.968 Sum_probs=19.8
Q ss_pred CccccccccccccCCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
+--| +|... .|+..-|+|+. |+.|||-
T Consensus 28 ~vrC-iC~~~-~~~~~mi~Cd~-C~~w~H~ 54 (98)
T 2lv9_A 28 VTRC-ICGFT-HDDGYMICCDK-CSVWQHI 54 (98)
T ss_dssp BCCC-TTSCC-SCSSCEEEBTT-TCBEEET
T ss_pred CEEe-ECCCc-cCCCcEEEcCC-CCCcCcC
Confidence 3445 67654 34678999998 9999993
No 15
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.59 E-value=0.0013 Score=36.72 Aligned_cols=23 Identities=30% Similarity=0.768 Sum_probs=18.0
Q ss_pred ccccccccCCceEEecccccceeeC
Q psy1385 45 ICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 45 ~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
+|++ ..|+..-|.|+. |+.|||-
T Consensus 8 ~C~~-~~~~~~MI~Cd~-C~~W~H~ 30 (52)
T 3o7a_A 8 FCMK-PFAGRPMIECNE-CHTWIHL 30 (52)
T ss_dssp TTCC-BCTTCCEEECTT-TCCEEET
T ss_pred EeCC-cCCCCCEEEcCC-CCccccc
Confidence 6765 344568999998 9999993
No 16
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=96.57 E-value=0.0026 Score=38.11 Aligned_cols=33 Identities=21% Similarity=0.525 Sum_probs=26.3
Q ss_pred CCCCCCcccccccccc-ccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEV-HDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV-~D~ddAI~CE~~C~~WFH 68 (69)
+.......|.+|.+.- .++++-|+|++ |+.|||
T Consensus 11 ~~~~~~~~C~vC~~~~s~~~~~ll~CD~-C~~~~H 44 (71)
T 2ku3_A 11 SLIDEDAVCSICMDGESQNSNVILFCDM-CNLAVH 44 (71)
T ss_dssp CCCCSSCSCSSSCCCCCCSSSCEEECSS-SCCEEE
T ss_pred cCCCCCCCCCCCCCCCCCCCCCEEECCC-CCCccc
Confidence 3455677899998764 56788899996 999999
No 17
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.47 E-value=0.0016 Score=35.67 Aligned_cols=25 Identities=40% Similarity=1.034 Sum_probs=20.3
Q ss_pred cccccccccccCCceEEecccccceee
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.|.+|++.- |.++-|+|+. |++|||
T Consensus 2 ~C~vC~~~~-~~~~ll~Cd~-C~~~~H 26 (51)
T 1f62_A 2 RCKVCRKKG-EDDKLILCDE-CNKAFH 26 (51)
T ss_dssp CCTTTCCSS-CCSCCEECTT-TCCEEC
T ss_pred CCCCCCCCC-CCCCEEECCC-CChhhC
Confidence 388888753 5678999996 999999
No 18
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=96.34 E-value=0.0039 Score=35.44 Aligned_cols=32 Identities=25% Similarity=0.691 Sum_probs=25.1
Q ss_pred CCCCcccccccccc-ccCCceEEecccccceeeC
Q psy1385 37 APPIYPCGICHKEV-HDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 37 s~~~ypCG~C~~eV-~D~ddAI~CE~~C~~WFHR 69 (69)
+.....|.+|.+.- .++++-|+|+. |+.|||.
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~-C~~~~H~ 35 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDK-CGQGYHQ 35 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSS-SCCEEET
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCC-CChHHHh
Confidence 45567899999854 44678889986 9999994
No 19
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.26 E-value=0.0035 Score=36.53 Aligned_cols=26 Identities=42% Similarity=1.002 Sum_probs=19.7
Q ss_pred cccccccccccCCceEEecc-cccceeeC
Q psy1385 42 PCGICHKEVHDNDQAILCES-GCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~-~C~~WFHR 69 (69)
-| +|++.+ |+..-|.|++ -|+.|||-
T Consensus 12 ~C-~C~~~~-~~g~mI~CD~~~C~~W~H~ 38 (68)
T 2rsd_A 12 RC-ICSSTM-VNDSMIQCEDQRCQVWQHL 38 (68)
T ss_dssp CC-TTCCCS-CCSCEEECSCTTTCEEEET
T ss_pred Ee-ECCCCc-CCCCEEEECCCCCCCeEch
Confidence 35 787654 3467999996 79999993
No 20
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.93 E-value=0.0075 Score=33.82 Aligned_cols=29 Identities=28% Similarity=0.708 Sum_probs=23.1
Q ss_pred CCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.+.....|.+|++. .+-|.|+. |..|||.
T Consensus 5 ~~~~~~~C~vC~~~----g~ll~Cd~-C~~~~H~ 33 (56)
T 2yql_A 5 SSGHEDFCSVCRKS----GQLLMCDT-CSRVYHL 33 (56)
T ss_dssp CCSSCCSCSSSCCS----SCCEECSS-SSCEECS
T ss_pred cCCCCCCCccCCCC----CeEEEcCC-CCcceEC
Confidence 34556679999974 58999996 9999994
No 21
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=95.88 E-value=0.0048 Score=37.97 Aligned_cols=31 Identities=23% Similarity=0.596 Sum_probs=24.9
Q ss_pred CCCCccccccccc-cccCCceEEecccccceee
Q psy1385 37 APPIYPCGICHKE-VHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~e-V~D~ddAI~CE~~C~~WFH 68 (69)
....-.|.+|... ..|+++-|+|+. |+.|||
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~-C~~~fH 53 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDM-CNLAVH 53 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSS-SCCCCC
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCC-CCchhh
Confidence 3566789999975 356678899996 999999
No 22
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=95.84 E-value=0.0098 Score=34.13 Aligned_cols=27 Identities=30% Similarity=0.762 Sum_probs=22.0
Q ss_pred CCCCccccccccccccCCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
+...-.|.+|++ ..+-|.|+. |.+|||
T Consensus 8 ~~~~~~C~vC~~----~g~ll~CD~-C~~~fH 34 (61)
T 2l5u_A 8 TDHQDYCEVCQQ----GGEIILCDT-CPRAYH 34 (61)
T ss_dssp SCCCSSCTTTSC----CSSEEECSS-SSCEEE
T ss_pred CCCCCCCccCCC----CCcEEECCC-CChhhh
Confidence 445667999987 368999996 999999
No 23
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=95.70 E-value=0.0093 Score=35.22 Aligned_cols=24 Identities=29% Similarity=0.805 Sum_probs=19.9
Q ss_pred CccccccccccccCCceEEecccccceee
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.-.|.+|+ |.++.|.|+. |++|||
T Consensus 12 ~~~C~vC~----~~~~ll~Cd~-C~~~~H 35 (66)
T 2lri_C 12 GARCGVCG----DGTDVLRCTH-CAAAFH 35 (66)
T ss_dssp TCCCTTTS----CCTTCEECSS-SCCEEC
T ss_pred CCCcCCCC----CCCeEEECCC-CCCcee
Confidence 44599997 4567999997 999999
No 24
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.62 E-value=0.011 Score=36.56 Aligned_cols=31 Identities=26% Similarity=0.731 Sum_probs=24.0
Q ss_pred CCCCccccccccccccCCceEEecccccceeeC
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
......|.+|++.- |.++-|+|+. |..|||.
T Consensus 13 ~~~~~~C~vC~~~~-~~~~ll~CD~-C~~~~H~ 43 (92)
T 2e6r_A 13 FIDSYICQVCSRGD-EDDKLLFCDG-CDDNYHI 43 (92)
T ss_dssp CCCCCCCSSSCCSG-GGGGCEECTT-TCCEECS
T ss_pred ccCCCCCccCCCcC-CCCCEEEcCC-CCchhcc
Confidence 34456799998753 4578999997 9999994
No 25
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=95.46 E-value=0.012 Score=34.04 Aligned_cols=27 Identities=22% Similarity=0.630 Sum_probs=21.8
Q ss_pred CCCccccccccccccCCceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
...-.|.+|+. ..+-|.|+. |.+|||.
T Consensus 6 ~~~~~C~vC~~----~g~ll~CD~-C~~~fH~ 32 (66)
T 1xwh_A 6 KNEDECAVCRD----GGELICCDG-CPRAFHL 32 (66)
T ss_dssp SCCCSBSSSSC----CSSCEECSS-CCCEECT
T ss_pred CCCCCCccCCC----CCCEEEcCC-CChhhcc
Confidence 45667999985 368999996 9999994
No 26
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.27 E-value=0.01 Score=45.87 Aligned_cols=32 Identities=38% Similarity=1.074 Sum_probs=24.7
Q ss_pred CCCCCCCccccccccccccCCceEEecccccceee
Q psy1385 34 NPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
+.++...| | +|++...++..-|.|+. |+.|||
T Consensus 32 ~~~~~~~y-C-~C~~~~d~~~~MIqCd~-C~~WfH 63 (488)
T 3kv5_D 32 PPPPPPVY-C-VCRQPYDVNRFMIECDI-CKDWFH 63 (488)
T ss_dssp CCCCCCEE-T-TTTEECCTTSCEEEBTT-TCCEEE
T ss_pred cCCCCCeE-E-eCCCcCCCCCCeEEccC-CCCcee
Confidence 34455555 3 99887655788999997 999999
No 27
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=94.73 E-value=0.024 Score=32.04 Aligned_cols=26 Identities=31% Similarity=0.784 Sum_probs=20.9
Q ss_pred CCccccccccccccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
..-.|.+|++. .+-|.|+. |..|||.
T Consensus 4 ~~~~C~vC~~~----g~ll~Cd~-C~~~fH~ 29 (60)
T 2puy_A 4 HEDFCSVCRKS----GQLLMCDT-CSRVYHL 29 (60)
T ss_dssp CCSSCTTTCCC----SSCEECSS-SSCEECG
T ss_pred CCCCCcCCCCC----CcEEEcCC-CCcCEEC
Confidence 34579999873 58999996 9999993
No 28
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=94.25 E-value=0.029 Score=35.29 Aligned_cols=25 Identities=20% Similarity=0.677 Sum_probs=18.5
Q ss_pred ccccccccccccCCceEEeccccc---ceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCN---FWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~---~WFHR 69 (69)
.-| +|++. ++.+-|.|+. |+ .|||-
T Consensus 27 ~yC-iC~~~--~~g~MI~CD~-c~C~~eWfH~ 54 (90)
T 2jmi_A 27 VYC-FCRNV--SYGPMVACDN-PACPFEWFHY 54 (90)
T ss_dssp CCS-TTTCC--CSSSEECCCS-SSCSCSCEET
T ss_pred cEE-EeCCC--CCCCEEEecC-CCCccccCcC
Confidence 345 99864 3357999998 77 89993
No 29
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=94.19 E-value=0.024 Score=33.49 Aligned_cols=25 Identities=28% Similarity=1.018 Sum_probs=19.5
Q ss_pred cccccccccccCCceEEecccccceee
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.|.+|++. .|.++-|+|++ |.+|||
T Consensus 20 ~C~~C~~~-~~~~~ll~CD~-C~~~yH 44 (70)
T 3asl_A 20 ACHLCGGR-QDPDKQLMCDE-CDMAFH 44 (70)
T ss_dssp SBTTTCCC-SCGGGEEECTT-TCCEEE
T ss_pred CCcCCCCc-CCCCCEEEcCC-CCCcee
Confidence 56677764 35678999996 999999
No 30
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=94.11 E-value=0.024 Score=32.95 Aligned_cols=22 Identities=23% Similarity=0.696 Sum_probs=17.4
Q ss_pred ccccccccCCceEEeccccc---ceeeC
Q psy1385 45 ICHKEVHDNDQAILCESGCN---FWYHR 69 (69)
Q Consensus 45 ~C~~eV~D~ddAI~CE~~C~---~WFHR 69 (69)
+|++. ++.+-|.|+. |+ .|||-
T Consensus 15 ~C~~~--~~g~MI~CD~-c~C~~~WfH~ 39 (62)
T 2g6q_A 15 LCNQV--SYGEMIGCDN-EQCPIEWFHF 39 (62)
T ss_dssp TTTEE--CCSEEEECSC-TTCSSCEEET
T ss_pred ECCCC--CCCCeeeeeC-CCCCcccEec
Confidence 89874 3468999998 66 99993
No 31
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=93.95 E-value=0.03 Score=34.94 Aligned_cols=26 Identities=27% Similarity=0.861 Sum_probs=21.9
Q ss_pred cccccccccccCCceEEecccccceee
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.|.+|++.-.|+++.|+|+. |.++||
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~-C~~~yH 88 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDS-CDRGFH 88 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTT-TCCEEC
T ss_pred ccccccCcCCCccceEEcCC-CCCeee
Confidence 58888876566778999998 999999
No 32
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=93.91 E-value=0.028 Score=32.22 Aligned_cols=23 Identities=30% Similarity=0.949 Sum_probs=17.1
Q ss_pred ccccccccCCceEEecc-ccc-ceeeC
Q psy1385 45 ICHKEVHDNDQAILCES-GCN-FWYHR 69 (69)
Q Consensus 45 ~C~~eV~D~ddAI~CE~-~C~-~WFHR 69 (69)
+|++. ++.+-|.|+. .|. .|||-
T Consensus 14 ~C~~~--~~g~mi~CD~cdC~~~wfH~ 38 (60)
T 2vnf_A 14 LCHQV--SYGEMIGCDNPDCSIEWFHF 38 (60)
T ss_dssp TTTEE--CCSEEEECSCTTCSSCEEET
T ss_pred ECCCc--CCCCEEEeCCCCCCCceEeh
Confidence 89875 3468999998 244 89993
No 33
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=93.79 E-value=0.042 Score=36.24 Aligned_cols=26 Identities=23% Similarity=0.620 Sum_probs=20.4
Q ss_pred CCccccccccccccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
..--|..|+. ..+.|.|+. |.+|||.
T Consensus 3 ~~~~C~~C~~----~g~ll~Cd~-C~~~~H~ 28 (184)
T 3o36_A 3 NEDWCAVCQN----GGELLCCEK-CPKVFHL 28 (184)
T ss_dssp SCSSCTTTCC----CSSCEECSS-SSCEECT
T ss_pred CCCccccCCC----CCeeeecCC-CCcccCc
Confidence 3445999984 467899998 9999994
No 34
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=93.23 E-value=0.054 Score=33.97 Aligned_cols=26 Identities=31% Similarity=0.864 Sum_probs=20.5
Q ss_pred cccccccccccCCceEEecccccceeeC
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.|.+|++.- |+++-|+|+. |.+|||.
T Consensus 60 ~C~~C~~~~-~~~~ll~Cd~-C~~~yH~ 85 (114)
T 2kwj_A 60 SCILCGTSE-NDDQLLFCDD-CDRGYHM 85 (114)
T ss_dssp CCTTTTCCT-TTTTEEECSS-SCCEEET
T ss_pred ccCcccccC-CCCceEEcCC-CCccccc
Confidence 588887753 4578899996 9999994
No 35
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.12 E-value=0.039 Score=42.55 Aligned_cols=24 Identities=25% Similarity=0.703 Sum_probs=20.2
Q ss_pred cccccccccCCceEEecccccceee
Q psy1385 44 GICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 44 G~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.+|++...++..-|.|+. |+-|||
T Consensus 8 CiC~~~~d~~~~MIqCD~-C~~WfH 31 (447)
T 3kv4_A 8 CLCRLPYDVTRFMIECDM-CQDWFH 31 (447)
T ss_dssp TTTTEECCTTSCEEECTT-TCCEEE
T ss_pred EeCCCcCCCCCCeEEcCC-CCcccc
Confidence 488876655788999997 999999
No 36
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=92.92 E-value=0.051 Score=31.20 Aligned_cols=23 Identities=30% Similarity=0.923 Sum_probs=17.2
Q ss_pred ccccccccCCceEEecc-ccc-ceeeC
Q psy1385 45 ICHKEVHDNDQAILCES-GCN-FWYHR 69 (69)
Q Consensus 45 ~C~~eV~D~ddAI~CE~-~C~-~WFHR 69 (69)
+|++. ++.+-|.|+. .|. .|||-
T Consensus 13 ~C~~~--~~g~mi~CD~~~C~~~wfH~ 37 (59)
T 3c6w_A 13 LCHQV--SYGEMIGCDNPDCPIEWFHF 37 (59)
T ss_dssp TTTEE--CCSEEEECSCTTCSSCEEET
T ss_pred ECCCC--CCCCeeEeeCCCCCCCCEec
Confidence 89875 3468999998 355 69993
No 37
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.82 E-value=0.089 Score=31.14 Aligned_cols=21 Identities=24% Similarity=0.817 Sum_probs=16.3
Q ss_pred ccccccccCCceEEeccccc---ceee
Q psy1385 45 ICHKEVHDNDQAILCESGCN---FWYH 68 (69)
Q Consensus 45 ~C~~eV~D~ddAI~CE~~C~---~WFH 68 (69)
+|.+. ++.+-|.|+. |+ .|||
T Consensus 10 ~C~~~--~~g~MI~CD~-cdC~~~WfH 33 (70)
T 1x4i_A 10 ICNQV--SYGEMVGCDN-QDCPIEWFH 33 (70)
T ss_dssp TTSCC--CCSSEECCSC-TTCSCCCEE
T ss_pred EcCCC--CCCCEeEeCC-CCCCccCCc
Confidence 57664 4558999999 64 8999
No 38
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.79 E-value=0.076 Score=32.05 Aligned_cols=27 Identities=33% Similarity=0.956 Sum_probs=21.5
Q ss_pred CccccccccccccCCceEEecccccceee
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.-.|.+|++. .|.++-|+|+. |+.+||
T Consensus 26 ~c~C~vC~~~-~~~~~ll~CD~-C~~~yH 52 (77)
T 2e6s_A 26 SCSCRVCGGK-HEPNMQLLCDE-CNVAYH 52 (77)
T ss_dssp SSSCSSSCCC-CCSTTEEECSS-SCCEEE
T ss_pred CCCCcCcCCc-CCCCCEEEcCC-CCcccc
Confidence 3478888864 35678999996 999999
No 39
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=92.77 E-value=0.053 Score=31.00 Aligned_cols=27 Identities=22% Similarity=0.666 Sum_probs=21.3
Q ss_pred CCCccccccccccccCCceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.....|.+|++ ..+-|.|+. |.++||.
T Consensus 7 ~~~~~C~vC~~----~g~ll~Cd~-C~~~fH~ 33 (61)
T 1mm2_A 7 HHMEFCRVCKD----GGELLCCDT-CPSSYHI 33 (61)
T ss_dssp SSCSSCTTTCC----CSSCBCCSS-SCCCBCS
T ss_pred CCCCcCCCCCC----CCCEEEcCC-CCHHHcc
Confidence 34556999985 468899997 9999994
No 40
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.36 E-value=0.19 Score=29.86 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=24.8
Q ss_pred CCCCCCCCCCccccccccccccCCceEEeccccc-----ceeeC
Q psy1385 31 NPQNPNAPPIYPCGICHKEVHDNDQAILCESGCN-----FWYHR 69 (69)
Q Consensus 31 n~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~-----~WFHR 69 (69)
......+...-.|.||..+..+++..| ..|+ .|||+
T Consensus 6 s~~s~~~~~~~~C~IC~~~~~~~~~l~---~pC~C~Gs~h~fH~ 46 (80)
T 2d8s_A 6 SGTSITPSSQDICRICHCEGDDESPLI---TPCHCTGSLHFVHQ 46 (80)
T ss_dssp CCCCCCCTTSCCCSSSCCCCCSSSCEE---CSSSCCSSSCCEET
T ss_pred CCCCCCCCCCCCCeEcCccccCCCeeE---eccccCCcCCeeCH
Confidence 344444555678999999887655543 5675 89996
No 41
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=92.29 E-value=0.054 Score=36.49 Aligned_cols=24 Identities=25% Similarity=0.710 Sum_probs=19.0
Q ss_pred ccccccccccccCCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
--|..|+. ..+.|.|++ |.+|||-
T Consensus 8 ~~C~~C~~----~g~ll~Cd~-C~~~~H~ 31 (207)
T 3u5n_A 8 DWCAVCQN----GGDLLCCEK-CPKVFHL 31 (207)
T ss_dssp SSBTTTCC----CEEEEECSS-SSCEECT
T ss_pred CCCCCCCC----CCceEEcCC-CCCccCC
Confidence 44999984 456888988 9999993
No 42
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=92.15 E-value=0.12 Score=33.16 Aligned_cols=29 Identities=24% Similarity=0.501 Sum_probs=22.3
Q ss_pred CCCCccccccccccccCCceEEecc-cccceeeC
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCES-GCNFWYHR 69 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~-~C~~WFHR 69 (69)
.....-|-.|+ |..+.|.|+. +|.+|||-
T Consensus 12 ~~~~~~C~~C~----~~G~ll~CD~~~Cp~~fH~ 41 (107)
T 4gne_A 12 QMHEDYCFQCG----DGGELVMCDKKDCPKAYHL 41 (107)
T ss_dssp CSSCSSCTTTC----CCSEEEECCSTTCCCEECT
T ss_pred CCCCCCCCcCC----CCCcEeEECCCCCCccccc
Confidence 34455688888 4578999995 69999993
No 43
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=91.73 E-value=0.34 Score=30.38 Aligned_cols=26 Identities=31% Similarity=0.903 Sum_probs=18.4
Q ss_pred ccccccccccccCCceEEecc-ccc-ceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCES-GCN-FWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~-~C~-~WFHR 69 (69)
.-| +|++.- +.+-|.|+. .|. .|||-
T Consensus 37 ~yC-iC~~~~--~g~MI~CD~~dC~~~WfH~ 64 (91)
T 1weu_A 37 TYC-LCHQVS--YGEMIGCDNPDCSIEWFHF 64 (91)
T ss_dssp BCS-TTCCBC--CSCCCCCSCSSCSCCCCCS
T ss_pred cEE-ECCCCC--CCCEeEecCCCCCCCCEec
Confidence 335 998753 468999998 355 79993
No 44
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=91.60 E-value=0.12 Score=31.70 Aligned_cols=26 Identities=23% Similarity=0.806 Sum_probs=19.8
Q ss_pred cccccccccccCCceEEecccccceeeC
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.|.+|++.- |++..|+|.. |++|||.
T Consensus 56 ~C~~C~~~~-~~~~ll~Cd~-C~~~yH~ 81 (111)
T 2ysm_A 56 VCQNCKQSG-EDSKMLVCDT-CDKGYHT 81 (111)
T ss_dssp CCTTTCCCS-CCTTEEECSS-SCCEEEG
T ss_pred cccccCccC-CCCCeeECCC-CCcHHhH
Confidence 477777653 3467999997 9999994
No 45
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=91.46 E-value=0.25 Score=29.26 Aligned_cols=25 Identities=32% Similarity=0.984 Sum_probs=18.0
Q ss_pred cccccccccccCCceEEecc-ccc-ceeeC
Q psy1385 42 PCGICHKEVHDNDQAILCES-GCN-FWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~-~C~-~WFHR 69 (69)
-| +|++. ++.+-|.|+. .|. .|||-
T Consensus 18 ~C-~C~~~--~~g~MI~CD~~~C~~~wfH~ 44 (71)
T 1wen_A 18 YC-LCHQV--SYGEMIGCDNPDCSIEWFHF 44 (71)
T ss_dssp CS-TTCCC--SCSSEECCSCSSCSCCCEET
T ss_pred EE-ECCCC--CCCCEeEeeCCCCCCccEec
Confidence 35 88774 2368999998 466 69993
No 46
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=90.55 E-value=0.14 Score=31.01 Aligned_cols=26 Identities=27% Similarity=0.972 Sum_probs=19.3
Q ss_pred ccccccccccccCCceEEecccccceee
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
..|-+|++. .|.++.|+|+. |.++||
T Consensus 27 C~C~vC~~~-~d~~~ll~CD~-C~~~yH 52 (77)
T 3shb_A 27 CACHLCGGR-QDPDKQLMCDE-CDMAFH 52 (77)
T ss_dssp TSBTTTCCC-SCGGGEEECTT-TCCEEE
T ss_pred CcCCccCCC-CCCcceeEeCC-CCCccC
Confidence 356666643 35578899997 999999
No 47
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=90.44 E-value=0.34 Score=25.03 Aligned_cols=31 Identities=23% Similarity=0.494 Sum_probs=23.9
Q ss_pred CCCccccccccccccCCceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
...+.|.||.+++.+.++.+.... |.-.||+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~-CgH~fc~ 33 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLP-CGHLLHR 33 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECT-TSCEEET
T ss_pred CCCCcCcccChhhcCCCcCeEecC-CCCcccH
Confidence 456889999999988766666554 8888885
No 48
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=89.49 E-value=0.18 Score=35.32 Aligned_cols=24 Identities=13% Similarity=0.347 Sum_probs=18.4
Q ss_pred cccccccccCCceEEecccccceee
Q psy1385 44 GICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 44 G~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
..|+++=.-+..-++|.. |..|||
T Consensus 8 CYCG~~~~~~~~mLqC~~-C~qWFH 31 (177)
T 3rsn_A 8 VDEENGRQLGEVELQCGI-CTKWFT 31 (177)
T ss_dssp ---CTTCCTTSCEEECTT-TCCEEE
T ss_pred EEcCCCCCCCceeEeecc-ccceec
Confidence 367776666788999999 999999
No 49
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=89.41 E-value=0.18 Score=30.82 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=17.2
Q ss_pred ccccccccccCCceEEecccccceeeC
Q psy1385 43 CGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 43 CG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
|+.|...-..++..|+|.. |+.|||.
T Consensus 62 c~~c~~~~~~~~~m~~C~~-C~~~~H~ 87 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCI-CNEIVHP 87 (117)
T ss_dssp BCCHHHHCCGGGSCEEETT-TCCEECG
T ss_pred ccccccccccCcceEEeee-cCCeEEC
Confidence 3444333333456789999 9999994
No 50
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=88.87 E-value=0.3 Score=29.65 Aligned_cols=29 Identities=24% Similarity=0.672 Sum_probs=22.9
Q ss_pred Ccccccccccccc-CCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
...|.+|++.-.+ +++-|+|+. |+..||.
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~-C~~~yH~ 45 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQE-CHNLYHQ 45 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSS-SCCEEET
T ss_pred CCcCCCCCCCCCCCCCceEECCC-CCCeEcC
Confidence 4579999986443 467899997 9999994
No 51
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=88.76 E-value=0.11 Score=31.40 Aligned_cols=28 Identities=25% Similarity=0.623 Sum_probs=21.9
Q ss_pred CCCCcccccccccccc-CCceEEecccccc
Q psy1385 37 APPIYPCGICHKEVHD-NDQAILCESGCNF 65 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D-~ddAI~CE~~C~~ 65 (69)
..-.|.|+.|+.++.- +.|+|.|-. |..
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~d~irCp~-CG~ 53 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRTDAVRCKD-CGH 53 (70)
T ss_dssp CCCCEECSSSCCEECCCTTSTTCCSS-SCC
T ss_pred ceEEEECCCCCCcceeCCCCCccCCC-CCc
Confidence 4678999999999443 478999987 754
No 52
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=88.31 E-value=0.51 Score=24.41 Aligned_cols=31 Identities=23% Similarity=0.532 Sum_probs=23.4
Q ss_pred CCCccccccccccccCCceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
+....|.||.+++.+++..+... .|.-.||+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~-~C~H~f~~ 33 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLP-RCGHGFHA 33 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECS-SSCCEECT
T ss_pred CCCCcCccCCccccCCCceEECC-CCCCcccH
Confidence 34578999999998877766544 38888885
No 53
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=87.68 E-value=0.3 Score=39.00 Aligned_cols=17 Identities=47% Similarity=1.050 Sum_probs=14.3
Q ss_pred ccCCceEEecccccceee
Q psy1385 51 HDNDQAILCESGCNFWYH 68 (69)
Q Consensus 51 ~D~ddAI~CE~~C~~WFH 68 (69)
+++...|.|+. |+-|||
T Consensus 53 n~~~~mI~CD~-C~~WfH 69 (528)
T 3pur_A 53 KNDFQWIGCDS-CQTWYH 69 (528)
T ss_dssp TSTTSEEECTT-TCCEEE
T ss_pred CcCCCEEECCC-CCcCCC
Confidence 34568899996 999999
No 54
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=87.15 E-value=0.29 Score=35.23 Aligned_cols=27 Identities=26% Similarity=0.907 Sum_probs=19.5
Q ss_pred ccccccccccccCCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
..|.+|++. .|.++-|+|.+ |+.+||-
T Consensus 175 c~C~vC~~~-~~~~~lL~CD~-C~~~yH~ 201 (226)
T 3ask_A 175 CACHLCGGR-QDPDKQLMCDE-CDMAFHI 201 (226)
T ss_dssp TSCSSSCCC-CC--CCEECSS-SCCEECS
T ss_pred CCCcCCCCC-CCCCCeEEcCC-CCcceeC
Confidence 358888874 34578899987 9999993
No 55
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=85.19 E-value=0.46 Score=28.55 Aligned_cols=26 Identities=27% Similarity=0.616 Sum_probs=21.1
Q ss_pred CCCccccccccccccC-CceEEeccccc
Q psy1385 38 PPIYPCGICHKEVHDN-DQAILCESGCN 64 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~-ddAI~CE~~C~ 64 (69)
+-.|.|+.|+.+|.-+ .+.|.|.- |.
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~-CG 45 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRE-CG 45 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSS-SC
T ss_pred CeEEECCCCCCeeecCCCCceECCC-CC
Confidence 5689999999999654 68899975 54
No 56
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=84.27 E-value=0.8 Score=26.65 Aligned_cols=40 Identities=20% Similarity=0.430 Sum_probs=28.2
Q ss_pred eeeCCCCCCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 28 MVFNPQNPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 28 ~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.+++...........|.||..++.+++..+. ..|.-.||+
T Consensus 28 ~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~~--l~C~H~Fh~ 67 (91)
T 2l0b_A 28 ILVTEDHGAVGQEMCCPICCSEYVKGDVATE--LPCHHYFHK 67 (91)
T ss_dssp EECCTTCSSSSSCSEETTTTEECCTTCEEEE--ETTTEEEEH
T ss_pred eeecccccccCCCCCCcccChhhcCCCcEEe--cCCCChHHH
Confidence 3445455556778899999999988765544 348888874
No 57
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=82.66 E-value=0.41 Score=32.25 Aligned_cols=23 Identities=30% Similarity=1.037 Sum_probs=18.4
Q ss_pred cccccccccccCCceEEecccccceeeC
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.|..|++ .++-|.|++ |.+.||.
T Consensus 4 ~C~~C~~----~g~ll~Cd~-C~~~~H~ 26 (189)
T 2ro1_A 4 ICRVCQK----PGDLVMCNQ-CEFCFHL 26 (189)
T ss_dssp CBTTTCC----CSSCCCCTT-TCCBCCS
T ss_pred cCccCCC----CCceeECCC-CCchhcc
Confidence 4888884 457888987 9999994
No 58
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.59 E-value=2.2 Score=23.22 Aligned_cols=32 Identities=22% Similarity=0.584 Sum_probs=23.5
Q ss_pred CCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.......|.||.+++.+.+..+.. .|.-.||+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~--~C~H~f~~ 42 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGIC--PCKHAFHR 42 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEE--TTTEEEEH
T ss_pred cCCCCCCCcCCCcccCCCCcEEEc--CCCCEecH
Confidence 345578899999999887665543 48878884
No 59
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=82.01 E-value=2.2 Score=22.23 Aligned_cols=33 Identities=21% Similarity=0.430 Sum_probs=24.0
Q ss_pred CCCCCCcccccccccc------------ccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEV------------HDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV------------~D~ddAI~CE~~C~~WFH 68 (69)
......|.|..|.+.. +..+....|+. |.+.|-
T Consensus 4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~-C~~~f~ 48 (70)
T 1x5w_A 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNY-CSFDTK 48 (70)
T ss_dssp CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSS-SSCEES
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCC-CCCccC
Confidence 3445679999998753 33567789998 988874
No 60
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=80.05 E-value=1.7 Score=26.40 Aligned_cols=32 Identities=22% Similarity=0.558 Sum_probs=23.7
Q ss_pred CCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.......|.+|+..- |.++-|.|.. |.+.||.
T Consensus 3 ~~~~~~~C~~C~~~g-~~~~ll~C~~-C~~~~H~ 34 (111)
T 2ysm_A 3 SGSSGANCAVCDSPG-DLLDQFFCTT-CGQHYHG 34 (111)
T ss_dssp CCCCCSCBTTTCCCC-CTTTSEECSS-SCCEECT
T ss_pred CCCCCCCCcCCCCCC-CCcCCeECCC-CCCCcCh
Confidence 345677899998763 3356699965 9999994
No 61
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=79.53 E-value=2 Score=26.83 Aligned_cols=30 Identities=23% Similarity=0.731 Sum_probs=23.0
Q ss_pred CCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
......-.|.+|.+. .+-|.|+. |.+-||-
T Consensus 20 ~~d~n~~~C~vC~~~----g~LL~CD~-C~~~fH~ 49 (88)
T 1fp0_A 20 TLDDSATICRVCQKP----GDLVMCNQ-CEFCFHL 49 (88)
T ss_dssp SSSSSSSCCSSSCSS----SCCEECTT-SSCEECT
T ss_pred ccCCCCCcCcCcCCC----CCEEECCC-CCCceec
Confidence 344556689999964 57899996 9999993
No 62
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=79.29 E-value=2.4 Score=22.78 Aligned_cols=33 Identities=15% Similarity=0.387 Sum_probs=23.5
Q ss_pred CCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
........|.||..++.+.++.+.- .|.-.||+
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~--~C~H~fc~ 41 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRL--PCMHLFHQ 41 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEEC--TTSCEEEH
T ss_pred CcCCCCCCCeeCCccccCCCcEEEe--CCCCHHHH
Confidence 3455678999999998776665432 48877874
No 63
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=77.98 E-value=1.6 Score=25.02 Aligned_cols=31 Identities=26% Similarity=0.767 Sum_probs=25.7
Q ss_pred CCCCccccccccccccCCceEEecc-ccccee
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCES-GCNFWY 67 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~-~C~~WF 67 (69)
--.+..|..|+..+..+++.+.|.+ .|..+|
T Consensus 7 lL~iL~CP~c~~~L~~~~~~L~C~~~~c~~~Y 38 (56)
T 2kpi_A 7 LLEILACPACHAPLEERDAELICTGQDCGLAY 38 (56)
T ss_dssp CTTSCCCSSSCSCEEEETTEEEECSSSCCCEE
T ss_pred HHhheeCCCCCCcceecCCEEEcCCcCCCcEE
Confidence 4467899999998877779999993 499988
No 64
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=77.85 E-value=3.4 Score=21.68 Aligned_cols=35 Identities=14% Similarity=0.478 Sum_probs=25.2
Q ss_pred CCCCCCCCcccccccccccc------------CCceEEecccccceee
Q psy1385 33 QNPNAPPIYPCGICHKEVHD------------NDQAILCESGCNFWYH 68 (69)
Q Consensus 33 q~~~s~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WFH 68 (69)
........|.|..|.+.... .+....|+. |.+-|-
T Consensus 10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~-C~k~f~ 56 (74)
T 2lce_A 10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI-CGAQFN 56 (74)
T ss_dssp -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTT-TCCEES
T ss_pred cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCC-CCchhC
Confidence 34455678999999876543 466789998 988774
No 65
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=76.49 E-value=2.1 Score=26.45 Aligned_cols=30 Identities=27% Similarity=0.549 Sum_probs=22.6
Q ss_pred CCcccccccccc-----ccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEV-----HDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV-----~D~ddAI~CE~~C~~WFHR 69 (69)
+.-.|.+|+..- .+.++-|.|.. |...||.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~-C~~~~H~ 38 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCAD-CGNSGHP 38 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTT-TCCEECH
T ss_pred cCccccccCCchhhCcCCCchhceEhhh-cCCCCCC
Confidence 455699997653 23468899998 9999993
No 66
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=76.35 E-value=3.2 Score=22.37 Aligned_cols=32 Identities=19% Similarity=0.552 Sum_probs=18.5
Q ss_pred CCCCCCcccccccccccc------------CCceEEeccccccee
Q psy1385 35 PNAPPIYPCGICHKEVHD------------NDQAILCESGCNFWY 67 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WF 67 (69)
......|.|..|.+.... .+....|+. |.+.|
T Consensus 31 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 74 (96)
T 2dmd_A 31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI-CPYAS 74 (96)
T ss_dssp CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS-SSCEE
T ss_pred cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC-CCCcc
Confidence 334455677777654432 355566766 66665
No 67
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=74.46 E-value=2.9 Score=20.57 Aligned_cols=29 Identities=21% Similarity=0.500 Sum_probs=19.9
Q ss_pred CCcccccccccccc------------CCceEEecccccceee
Q psy1385 39 PIYPCGICHKEVHD------------NDQAILCESGCNFWYH 68 (69)
Q Consensus 39 ~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WFH 68 (69)
..|.|..|.+.... .+....|+. |.+.|-
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f~ 43 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF-CEYAAA 43 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS-SSCEES
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC-CcchhC
Confidence 45888888876543 466788888 888774
No 68
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=74.41 E-value=2.8 Score=21.96 Aligned_cols=32 Identities=13% Similarity=0.384 Sum_probs=21.8
Q ss_pred CCCCCCccccccccc---------cccCCceEEeccccccee
Q psy1385 35 PNAPPIYPCGICHKE---------VHDNDQAILCESGCNFWY 67 (69)
Q Consensus 35 ~~s~~~ypCG~C~~e---------V~D~ddAI~CE~~C~~WF 67 (69)
....-.|.|..|++. ++..+....|+. |.+-|
T Consensus 9 H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~-C~k~f 49 (62)
T 1vd4_A 9 STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTF-CHTEV 49 (62)
T ss_dssp CCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSS-SCCBC
T ss_pred cCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCC-CCCcc
Confidence 444566888888873 445566777877 87766
No 69
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=73.43 E-value=3.5 Score=22.18 Aligned_cols=13 Identities=23% Similarity=0.667 Sum_probs=6.9
Q ss_pred CCCcccccccccc
Q psy1385 38 PPIYPCGICHKEV 50 (69)
Q Consensus 38 ~~~ypCG~C~~eV 50 (69)
...|.|..|.+..
T Consensus 33 ~~~~~C~~C~~~f 45 (95)
T 2yt9_A 33 EKPYSCPVCGLRF 45 (95)
T ss_dssp SCSEECSSSCCEE
T ss_pred CCCCcCCCCCCcc
Confidence 3446666665543
No 70
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=73.33 E-value=1.6 Score=28.12 Aligned_cols=16 Identities=19% Similarity=0.650 Sum_probs=13.3
Q ss_pred cccCCceEEecccccce
Q psy1385 50 VHDNDQAILCESGCNFW 66 (69)
Q Consensus 50 V~D~ddAI~CE~~C~~W 66 (69)
+..++.+|+|+. |.+|
T Consensus 22 ~~~~~~WVQCD~-C~KW 37 (100)
T 2l7p_A 22 YSTESAWVRCDD-CFKW 37 (100)
T ss_dssp CSSSSEEEECTT-TCCE
T ss_pred CCCCCeEEeeCC-CCcc
Confidence 344789999996 9999
No 71
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=72.87 E-value=5.5 Score=21.79 Aligned_cols=32 Identities=16% Similarity=0.409 Sum_probs=22.3
Q ss_pred CCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.......|.||.+++.+.+..+. ..|.-.||+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~--~~C~H~fc~ 42 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGESVRQ--LPCNHLFHD 42 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSCEEE--CTTSCEEET
T ss_pred cCCCCCCCeeCCccccCCCCEEE--eCCCCeecH
Confidence 34557899999999987665432 247777774
No 72
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=72.79 E-value=3.4 Score=22.75 Aligned_cols=13 Identities=15% Similarity=0.598 Sum_probs=7.0
Q ss_pred CCCcccccccccc
Q psy1385 38 PPIYPCGICHKEV 50 (69)
Q Consensus 38 ~~~ypCG~C~~eV 50 (69)
...|.|.+|.+..
T Consensus 15 ~~~~~C~~C~~~f 27 (106)
T 2ee8_A 15 KKEFICKFCGRHF 27 (106)
T ss_dssp CCCCBCSSSCCBC
T ss_pred CcCeECCCCCCcc
Confidence 3346666665544
No 73
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=72.24 E-value=2.3 Score=34.07 Aligned_cols=27 Identities=30% Similarity=0.899 Sum_probs=22.5
Q ss_pred CCCccccccccccccCCceEEeccccccee
Q psy1385 38 PPIYPCGICHKEVHDNDQAILCESGCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI~CE~~C~~WF 67 (69)
.+.+-|-+|+ ++|-.-.+.|.. |++||
T Consensus 4 ~~~~~c~~c~--~~~~~~~~~~~~-~~~~f 30 (800)
T 2wjy_A 4 LPIHACSYCG--IHDPACVVYCNT-SKKWF 30 (800)
T ss_dssp CCTTSCTTTC--CCCGGGEEEETT-TTEEE
T ss_pred CCchhccccC--CCCCCeEEEcCC-CCCcc
Confidence 3678899997 456678999997 99999
No 74
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=71.63 E-value=2.3 Score=29.36 Aligned_cols=26 Identities=27% Similarity=0.628 Sum_probs=20.8
Q ss_pred ccccccccccc--------CCceEEecccccceee
Q psy1385 42 PCGICHKEVHD--------NDQAILCESGCNFWYH 68 (69)
Q Consensus 42 pCG~C~~eV~D--------~ddAI~CE~~C~~WFH 68 (69)
-||-|+..|.. .++-|.|+. |++..-
T Consensus 200 ~C~GC~~~lppq~~~~i~~~~~Iv~Cp~-CgRIL~ 233 (256)
T 3na7_A 200 ACGGCFIRLNDKIYTEVLTSGDMITCPY-CGRILY 233 (256)
T ss_dssp BCTTTCCBCCHHHHHHHHHSSSCEECTT-TCCEEE
T ss_pred ccCCCCeeeCHHHHHHHHCCCCEEECCC-CCeeEE
Confidence 69999988765 478899998 988753
No 75
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=71.48 E-value=2.3 Score=34.01 Aligned_cols=26 Identities=27% Similarity=0.816 Sum_probs=21.0
Q ss_pred CCccccccccccccCCceEEeccccccee
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWY 67 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WF 67 (69)
+..-|-+|+ ++|-.-.+.|.. |++||
T Consensus 10 ~~~~c~yc~--~~~~~~~~~c~~-~~~wf 35 (802)
T 2xzl_A 10 SDNSCAYCG--IDSAKCVIKCNS-CKKWF 35 (802)
T ss_dssp --CCCTTTC--CCCTTTEEEETT-TCCEE
T ss_pred ChhhCcccC--CCCCceEEEeCC-CCcEe
Confidence 667899998 466778999997 99999
No 76
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=70.89 E-value=4.1 Score=19.99 Aligned_cols=26 Identities=27% Similarity=0.699 Sum_probs=15.4
Q ss_pred ccccccccccc------------cCCceEEeccccccee
Q psy1385 41 YPCGICHKEVH------------DNDQAILCESGCNFWY 67 (69)
Q Consensus 41 ypCG~C~~eV~------------D~ddAI~CE~~C~~WF 67 (69)
|.|..|.+... ..+....|+. |.+-|
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 39 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTY-CNFSF 39 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSS-SSCEE
T ss_pred CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCC-CCchh
Confidence 56667765433 2345566776 76665
No 77
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.89 E-value=6 Score=20.62 Aligned_cols=33 Identities=21% Similarity=0.492 Sum_probs=24.2
Q ss_pred CCCCCCcccccccccc------------ccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEV------------HDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV------------~D~ddAI~CE~~C~~WFH 68 (69)
......|.|..|.+.. +..+....|+. |.+-|-
T Consensus 9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~-C~~~f~ 53 (72)
T 1x6e_A 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE-CGKAFS 53 (72)
T ss_dssp TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS-SCCEES
T ss_pred cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC-CCcccC
Confidence 3445679999998754 33567789998 988874
No 78
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=68.95 E-value=2.9 Score=22.11 Aligned_cols=26 Identities=27% Similarity=0.820 Sum_probs=21.5
Q ss_pred CccccccccccccCCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.--|..|.+.+- ++..|+. |..=.|+
T Consensus 14 pt~C~~C~~~l~---qG~~C~~-C~~~~H~ 39 (52)
T 1faq_A 14 LAFCDICQKFLL---NGFRCQT-CGYKFHE 39 (52)
T ss_dssp CEECTTSSSEEC---SEEECTT-TTCCBCS
T ss_pred CcCCCCcccccc---cCCEeCC-CCCeECh
Confidence 456999999886 8999998 8887775
No 79
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.93 E-value=6.6 Score=21.45 Aligned_cols=39 Identities=23% Similarity=0.438 Sum_probs=25.3
Q ss_pred eeeCCCCCCCCCCccccccccccccCCceEEecccccceeeC
Q psy1385 28 MVFNPQNPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 28 ~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
..|++.+ .......|.||.+++.+.+.. ... .|.--||+
T Consensus 12 ~~~~~~~-~~~~~~~C~IC~~~~~~~~~~-~~l-~C~H~fh~ 50 (75)
T 1x4j_A 12 YRFNPNN-HQSEQTLCVVCMCDFESRQLL-RVL-PCNHEFHA 50 (75)
T ss_dssp EEBCSSS-CSSSCCEETTTTEECCBTCEE-EEE-TTTEEEET
T ss_pred EEecCcc-ccCCCCCCeECCcccCCCCeE-EEE-CCCCHhHH
Confidence 3455443 345667899999998876543 332 38877885
No 80
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.48 E-value=5.8 Score=23.48 Aligned_cols=28 Identities=29% Similarity=0.680 Sum_probs=22.4
Q ss_pred CCCCccccccccccccCCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.+.+-.|.||...|.. .+.|. .|+.=||
T Consensus 12 ~~~i~~C~IC~~~i~~---g~~C~-~C~h~fH 39 (74)
T 2ct0_A 12 PDAVKICNICHSLLIQ---GQSCE-TCGIRMH 39 (74)
T ss_dssp SSSSCBCSSSCCBCSS---SEECS-SSCCEEC
T ss_pred cCCCCcCcchhhHccc---CCccC-CCCchhh
Confidence 4456889999999974 57898 5988777
No 81
>1gyo_A Cytochrome C3, A dimeric class III C-type cytochrome; electron transport, DI-tetraheme, AB initio, electron transfer; HET: HEC; 1.2A {Desulfovibrio gigas} SCOP: a.138.1.1
Probab=66.01 E-value=2.6 Score=26.14 Aligned_cols=49 Identities=12% Similarity=0.229 Sum_probs=30.6
Q ss_pred ccceecceecc---CCCceeeCCCCCCCCCCccccccccccccCCceEEecccccc
Q psy1385 13 PMPVCAGKIYP---ENQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCESGCNF 65 (69)
Q Consensus 13 ~~~~~~~~~~p---~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~ 65 (69)
.|.+.....|+ .-||..|+=+.... .-|..||..+.....-..|.. |+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~v~F~H~~H~~---~~C~~CHh~~~~~~~~~~C~~-CH~ 57 (109)
T 1gyo_A 6 KVVITAPEGEDPHPRFGKVEMSHAKHRN---VSCVSCHHMFDGCGDFQKCAD-CHI 57 (109)
T ss_dssp EEEECSSTTSCCCSSSCCEEEETTTTTT---SCHHHHSTTCCSSBCCCCGGG-TCC
T ss_pred ceeecCcccccccccCCCccCCHHHHCc---CChhhcCCCCCCCCCCcchhh-hcC
Confidence 34444444455 56889998888775 689999976533333445643 653
No 82
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=65.93 E-value=4.2 Score=22.66 Aligned_cols=11 Identities=27% Similarity=0.576 Sum_probs=5.3
Q ss_pred Ccccccccccc
Q psy1385 40 IYPCGICHKEV 50 (69)
Q Consensus 40 ~ypCG~C~~eV 50 (69)
.|.|..|.+..
T Consensus 35 ~~~C~~C~~~f 45 (124)
T 2dlq_A 35 PFECPKCGKCY 45 (124)
T ss_dssp SCBCTTTCCBC
T ss_pred CeECCCCCchh
Confidence 35555555443
No 83
>4hn5_A Glucocorticoid receptor; glucocorticoid receptor, steroid receptors, NGRE, repre transcription; HET: DNA; 1.90A {Homo sapiens} PDB: 4hn6_A*
Probab=65.19 E-value=0.82 Score=29.73 Aligned_cols=34 Identities=24% Similarity=0.615 Sum_probs=20.8
Q ss_pred CCCCCCccccccccccccC-CceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDN-DQAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~-ddAI~CE~~C~~WFHR 69 (69)
.++.+.-.|-+|...-... =.++-||+ |..+|-|
T Consensus 24 ~~~~~~~~C~VCgd~a~G~HyGv~sC~a-Ck~FFRR 58 (117)
T 4hn5_A 24 ASNAPPKLCLVCSDEASGCHYGVLTCGS-CKVFFKR 58 (117)
T ss_dssp ------CBCTTTCSBCCEEETTEEECHH-HHHHHHH
T ss_pred CCCCCCCcCCcCCCcCcccccCCcccch-hhhhhhc
Confidence 3445567899998766554 35667888 9888754
No 84
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.05 E-value=6.8 Score=21.73 Aligned_cols=30 Identities=23% Similarity=0.583 Sum_probs=19.6
Q ss_pred CCCccccccccccc------------cCCceEEecccccceee
Q psy1385 38 PPIYPCGICHKEVH------------DNDQAILCESGCNFWYH 68 (69)
Q Consensus 38 ~~~ypCG~C~~eV~------------D~ddAI~CE~~C~~WFH 68 (69)
...|.|..|.+... ..+....|+. |.+.|-
T Consensus 35 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f~ 76 (110)
T 2csh_A 35 LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI-CAKRFM 76 (110)
T ss_dssp CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSS-SCCEES
T ss_pred CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCC-Ccchhc
Confidence 34578888876433 2456677877 887774
No 85
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.95 E-value=9 Score=20.10 Aligned_cols=34 Identities=24% Similarity=0.582 Sum_probs=24.0
Q ss_pred CCCCCCCcccccccccc-------------ccCC-ceEEecccccceee
Q psy1385 34 NPNAPPIYPCGICHKEV-------------HDND-QAILCESGCNFWYH 68 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV-------------~D~d-dAI~CE~~C~~WFH 68 (69)
.......|.|.+|.+.. +..+ ....|+. |.+.|-
T Consensus 9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~-C~~~f~ 56 (77)
T 2ct1_A 9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH-CDTVIA 56 (77)
T ss_dssp CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS-SSCEES
T ss_pred ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC-CCCccC
Confidence 44556679999998753 3232 5789998 998874
No 86
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.66 E-value=11 Score=20.62 Aligned_cols=33 Identities=18% Similarity=0.374 Sum_probs=22.7
Q ss_pred CCCCCCccccccccccccCCc-eEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQ-AILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~dd-AI~CE~~C~~WFHR 69 (69)
......+.|.+|.+.+.+++. .+. ..|.-.||+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~--~~CgH~fC~ 43 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKL--LHCGHTICR 43 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEE--CSSSCEEEH
T ss_pred hhccCCCCCccCCccccccCCCeEE--CCCCChhhH
Confidence 344567899999999988664 332 257777763
No 87
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=63.25 E-value=7 Score=19.39 Aligned_cols=26 Identities=23% Similarity=0.741 Sum_probs=14.7
Q ss_pred ccccccccccc------------cCCceEEeccccccee
Q psy1385 41 YPCGICHKEVH------------DNDQAILCESGCNFWY 67 (69)
Q Consensus 41 ypCG~C~~eV~------------D~ddAI~CE~~C~~WF 67 (69)
|.|..|.+... ..+....|+. |.+-|
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 40 (60)
T 2adr_A 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL-CNRAF 40 (60)
T ss_dssp BCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTT-TCCEE
T ss_pred CcCCCCccccCCHHHHHHHHHHhCCCCCccCCC-CCCcc
Confidence 56666665432 2345566666 66655
No 88
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=62.52 E-value=5.3 Score=24.71 Aligned_cols=27 Identities=19% Similarity=0.449 Sum_probs=20.2
Q ss_pred ccccccccc------ccCCceEEecccccceeeC
Q psy1385 42 PCGICHKEV------HDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV------~D~ddAI~CE~~C~~WFHR 69 (69)
.|.+|...- .|.++-|.|.. |...||.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~-C~~~~H~ 35 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCAD-CGRSGHP 35 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSS-SCCEECT
T ss_pred cCccCCCCccccccCCCCCCCeEeCC-CCCccch
Confidence 388887543 34478899987 9999994
No 89
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=62.25 E-value=6.5 Score=23.33 Aligned_cols=28 Identities=18% Similarity=0.562 Sum_probs=21.4
Q ss_pred CCccccccccccc--cCCceEEeccccccee
Q psy1385 39 PIYPCGICHKEVH--DNDQAILCESGCNFWY 67 (69)
Q Consensus 39 ~~ypCG~C~~eV~--D~ddAI~CE~~C~~WF 67 (69)
.+.-|..|...+. .+++.+.|.. |..+|
T Consensus 7 eiL~CP~ck~~L~~~~~~~~LiC~~-cg~~Y 36 (69)
T 2pk7_A 7 DILACPICKGPLKLSADKTELISKG-AGLAY 36 (69)
T ss_dssp GTCCCTTTCCCCEECTTSSEEEETT-TTEEE
T ss_pred hheeCCCCCCcCeEeCCCCEEEcCC-CCcEe
Confidence 3567899987765 3467889987 99887
No 90
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.07 E-value=9.7 Score=22.83 Aligned_cols=36 Identities=31% Similarity=0.599 Sum_probs=27.3
Q ss_pred CCCCCCCCCCcccccccccc-------------c---cCCceEEeccccccee
Q psy1385 31 NPQNPNAPPIYPCGICHKEV-------------H---DNDQAILCESGCNFWY 67 (69)
Q Consensus 31 n~q~~~s~~~ypCG~C~~eV-------------~---D~ddAI~CE~~C~~WF 67 (69)
|-||...+..|.|..|.+.. + ..+....|+. |.+-|
T Consensus 9 ~~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~-Cgk~F 60 (102)
T 2ghf_A 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE-CNFLT 60 (102)
T ss_dssp TTTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT-TTEEE
T ss_pred ccccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC-CCccc
Confidence 67888888899999998753 3 2245688988 88776
No 91
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=60.09 E-value=6.8 Score=20.23 Aligned_cols=29 Identities=28% Similarity=0.752 Sum_probs=20.7
Q ss_pred CCCcccccccccccc------------CCceEEeccccccee
Q psy1385 38 PPIYPCGICHKEVHD------------NDQAILCESGCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WF 67 (69)
...|.|..|.+.... .+....|+. |.+.|
T Consensus 27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 67 (82)
T 2kmk_A 27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV-CGKAF 67 (82)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT-TSCEE
T ss_pred CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC-cchhh
Confidence 346888888876543 466788887 88776
No 92
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=59.71 E-value=4.4 Score=27.59 Aligned_cols=23 Identities=30% Similarity=0.627 Sum_probs=18.7
Q ss_pred ccccccccccc-CCceEEecccccc
Q psy1385 42 PCGICHKEVHD-NDQAILCESGCNF 65 (69)
Q Consensus 42 pCG~C~~eV~D-~ddAI~CE~~C~~ 65 (69)
-|..|.+-|.+ .+....||. |+.
T Consensus 44 ACp~CnKKV~~~~~g~~~Cek-C~~ 67 (172)
T 3u50_C 44 RCTCQGKSVLKYHGDSFFCES-CQQ 67 (172)
T ss_dssp ECTTSCCCEEEETTTEEEETT-TTE
T ss_pred hchhhCCEeeeCCCCeEECCC-CCC
Confidence 47789999985 467789998 986
No 93
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=59.44 E-value=11 Score=21.84 Aligned_cols=31 Identities=16% Similarity=0.420 Sum_probs=24.3
Q ss_pred CCCCcccccccccccc------------CCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHD------------NDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WFH 68 (69)
+...|.|.+|.+.... .+....|+. |.+-|-
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~-C~k~F~ 67 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKY-CPATFY 67 (85)
T ss_dssp CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTT-SSCEES
T ss_pred CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCC-CCCEeC
Confidence 4456999999886544 577899998 999884
No 94
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=58.87 E-value=18 Score=18.89 Aligned_cols=32 Identities=19% Similarity=0.522 Sum_probs=23.1
Q ss_pred CCCCCccccccccccc------------cCCceEEecccccceee
Q psy1385 36 NAPPIYPCGICHKEVH------------DNDQAILCESGCNFWYH 68 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~------------D~ddAI~CE~~C~~WFH 68 (69)
.....|.|.+|.+... ..+....|+. |.+-|-
T Consensus 14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f~ 57 (77)
T 2cot_A 14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE-CGKAFI 57 (77)
T ss_dssp CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSS-SCCEES
T ss_pred CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCC-CCCccC
Confidence 3456799999987654 3466788988 888774
No 95
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=58.52 E-value=3.2 Score=24.22 Aligned_cols=20 Identities=35% Similarity=0.858 Sum_probs=14.6
Q ss_pred CCccccccccccccCCceEE
Q psy1385 39 PIYPCGICHKEVHDNDQAIL 58 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~ 58 (69)
.+|.|+-|++++.++|-.++
T Consensus 2 ~iY~C~rCg~~fs~~el~~l 21 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQLKVL 21 (48)
T ss_dssp ---CCCCTTTTCCCCCSCCC
T ss_pred cEEEeeccCCCccHHHHhhC
Confidence 37999999999999877554
No 96
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=58.28 E-value=7.2 Score=23.08 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=21.7
Q ss_pred CCcccccccccccc--CCceEEeccccccee
Q psy1385 39 PIYPCGICHKEVHD--NDQAILCESGCNFWY 67 (69)
Q Consensus 39 ~~ypCG~C~~eV~D--~ddAI~CE~~C~~WF 67 (69)
.+.-|..|...+.- .++.+.|.. |..+|
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~-cg~~Y 36 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSRQ-AKLAY 36 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEETT-TTEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCC-CCcEe
Confidence 46789999876554 357899987 99988
No 97
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=58.26 E-value=3.1 Score=26.18 Aligned_cols=18 Identities=22% Similarity=0.601 Sum_probs=13.1
Q ss_pred cccCCceEEecccccceee
Q psy1385 50 VHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 50 V~D~ddAI~CE~~C~~WFH 68 (69)
+...+..+.|+. |++||-
T Consensus 87 ~~~~~~~~~C~~-C~~~f~ 104 (127)
T 1zu1_A 87 SDGEDRSKCCPV-CNMTFS 104 (127)
T ss_dssp SSCCCTTTEETT-TTEECS
T ss_pred ccCCCCCeEcCC-CCCEeC
Confidence 344567788888 988884
No 98
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=58.08 E-value=9.3 Score=20.83 Aligned_cols=31 Identities=19% Similarity=0.518 Sum_probs=22.1
Q ss_pred CCCCcccccccccccc------------CCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHD------------NDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WFH 68 (69)
|+-.|.|..|++.... .+....|+. |.+-|-
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~-C~k~F~ 43 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPE-CGKCFR 43 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTT-TCCEES
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCC-CCCCcC
Confidence 4556888888876544 467788887 877763
No 99
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=57.91 E-value=5.9 Score=26.04 Aligned_cols=26 Identities=19% Similarity=0.590 Sum_probs=20.6
Q ss_pred ccccccccccccCCceEEeccccccee
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWY 67 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WF 67 (69)
-.|..|+.|+.-+++.+.|+. |+.=|
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~-C~~~f 58 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRS-CGEFI 58 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETT-TCCEE
T ss_pred ccCccCCCcceecCCEEECcc-ccchh
Confidence 579999999877667777998 88654
No 100
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=57.32 E-value=5.3 Score=23.38 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=21.0
Q ss_pred CCccccccccccccCC-------------ceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDND-------------QAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~d-------------dAI~CE~~C~~WFHR 69 (69)
....|.||.+++.+.+ ..+.-...|.=.||+
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~ 67 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHL 67 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECH
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccH
Confidence 4568999999986632 123334568888984
No 101
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=7.6 Score=18.18 Aligned_cols=15 Identities=27% Similarity=0.598 Sum_probs=8.8
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
....|.|..|.+...
T Consensus 9 ~~~~~~C~~C~k~F~ 23 (44)
T 2eox_A 9 DSKSYNCNECGKAFT 23 (44)
T ss_dssp CCCCEEETTTTEEES
T ss_pred CCCCeECcccCcccC
Confidence 344577777766543
No 102
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=56.73 E-value=7.7 Score=23.00 Aligned_cols=28 Identities=18% Similarity=0.263 Sum_probs=21.8
Q ss_pred CCccccccccccccC--CceEEeccccccee
Q psy1385 39 PIYPCGICHKEVHDN--DQAILCESGCNFWY 67 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~--ddAI~CE~~C~~WF 67 (69)
.+.-|..|...+.-+ ++.+.|.. |..+|
T Consensus 9 eiL~CP~ck~~L~~~~~~g~LvC~~-c~~~Y 38 (67)
T 2jny_A 9 EVLACPKDKGPLRYLESEQLLVNER-LNLAY 38 (67)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETT-TTEEE
T ss_pred HHhCCCCCCCcCeEeCCCCEEEcCC-CCccc
Confidence 467899998876543 56899997 99887
No 103
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.64 E-value=7.7 Score=18.35 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=11.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
...-.|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSW 24 (46)
T ss_dssp CCCCSEECSSSCCEESS
T ss_pred CCCCCeeCcccChhhCC
Confidence 34456888888776543
No 104
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.62 E-value=5 Score=22.84 Aligned_cols=30 Identities=27% Similarity=0.660 Sum_probs=20.3
Q ss_pred Ccccccccccccc----------CCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHD----------NDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D----------~ddAI~CE~~C~~WFHR 69 (69)
.-.|.||..++.+ +++.+.-...|.=-||+
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~ 54 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHN 54 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEH
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccCh
Confidence 4559999998876 34444444458888884
No 105
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=55.50 E-value=14 Score=22.30 Aligned_cols=36 Identities=22% Similarity=0.605 Sum_probs=26.5
Q ss_pred CCceeeCCCCCCCCCCccccccccccccCCceEEecccccceee
Q psy1385 25 NQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 25 ~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.-|+.+.... .|.|-.|.+... .-.-.|.. |++-+|
T Consensus 37 ~H~L~L~~~~-----~~~C~~C~~~~~--~~~Y~C~~-C~f~lH 72 (89)
T 1v5n_A 37 EHELELTRVQ-----VYTCDKCEEEGT--IWSYHCDE-CDFDLH 72 (89)
T ss_dssp TSCEEEECCS-----SCCCTTTSCCCC--SCEEECTT-TCCCCC
T ss_pred CCccEEeeCC-----CeEeCCCCCcCC--CcEEEcCC-CCCeEc
Confidence 4566665542 589999999863 45678886 999888
No 106
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=55.47 E-value=8 Score=17.84 Aligned_cols=15 Identities=27% Similarity=0.614 Sum_probs=9.8
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
....|.|..|.+...
T Consensus 7 ~~k~~~C~~C~k~f~ 21 (42)
T 2el5_A 7 GENPYECSECGKAFN 21 (42)
T ss_dssp SCCSEECSSSCCEES
T ss_pred CCCCccCCCcChhhC
Confidence 345678888877543
No 107
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=55.29 E-value=1.6 Score=27.06 Aligned_cols=34 Identities=24% Similarity=0.578 Sum_probs=21.5
Q ss_pred CCCCCCccccccccccccCC-ceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
+.+...-.|-+|+..-+..+ .++-||+ |...|-|
T Consensus 5 ~~~~~~~~C~VCgd~a~g~hyGv~sC~a-Ck~FFRR 39 (93)
T 2han_A 5 PLSGSKHLCSICGDRASGKHYGVYSCEG-CKGFFKR 39 (93)
T ss_dssp -----CCBCTTTCSBCCEEETTEEECHH-HHHHHHH
T ss_pred CCCCCCCCCcEeCCCCcCeecCcchhHH-HHHHHHh
Confidence 34455678999998765543 5777887 9887744
No 108
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.28 E-value=8.1 Score=17.83 Aligned_cols=15 Identities=20% Similarity=0.496 Sum_probs=9.4
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
....|.|..|.+...
T Consensus 8 ~~k~~~C~~C~k~f~ 22 (42)
T 2en2_A 8 GEKPYKCETCGARFV 22 (42)
T ss_dssp SSCSEECTTTCCEES
T ss_pred CCCCEeCCCcChhhC
Confidence 345677777776543
No 109
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.91 E-value=8.2 Score=18.24 Aligned_cols=17 Identities=24% Similarity=0.653 Sum_probs=10.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~F~~ 24 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQ 24 (46)
T ss_dssp SSCCSEECSSSCCEESS
T ss_pred CCCcCeECCCCCcccCC
Confidence 34456888888776443
No 110
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=54.53 E-value=11 Score=19.77 Aligned_cols=29 Identities=17% Similarity=0.653 Sum_probs=20.4
Q ss_pred CCCcccccccccccc------------CCceEEeccccccee
Q psy1385 38 PPIYPCGICHKEVHD------------NDQAILCESGCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~WF 67 (69)
...|.|..|.+.... .+....|+. |.+.|
T Consensus 32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 72 (90)
T 1a1h_A 32 QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI-CGRKF 72 (90)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT-TCCEE
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC-CCchh
Confidence 456888888875443 456678887 88776
No 111
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.32 E-value=8.4 Score=18.12 Aligned_cols=17 Identities=29% Similarity=0.649 Sum_probs=11.3
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQ 24 (46)
T ss_dssp CCCCCEECSSSCCEESS
T ss_pred CCCCCeECCCCCCccCC
Confidence 34556888888876443
No 112
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.86 E-value=8.1 Score=18.26 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=11.1
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTD 24 (46)
T ss_dssp SCCCSEECSSSCCEESS
T ss_pred CCCCCeECCCCCchhCC
Confidence 34456888888876543
No 113
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=53.84 E-value=8.9 Score=22.79 Aligned_cols=29 Identities=14% Similarity=0.465 Sum_probs=22.1
Q ss_pred CCCcccccccccccc--CCceEEeccccccee
Q psy1385 38 PPIYPCGICHKEVHD--NDQAILCESGCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D--~ddAI~CE~~C~~WF 67 (69)
-.+.-|..|...+.- +++.+.|.. |..+|
T Consensus 6 L~iL~CP~ck~~L~~~~~~~~LiC~~-cg~~Y 36 (70)
T 2js4_A 6 LDILVCPVCKGRLEFQRAQAELVCNA-DRLAF 36 (70)
T ss_dssp CCCCBCTTTCCBEEEETTTTEEEETT-TTEEE
T ss_pred hhheECCCCCCcCEEeCCCCEEEcCC-CCcee
Confidence 356789999876554 357899988 99888
No 114
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.82 E-value=8.1 Score=17.92 Aligned_cols=16 Identities=25% Similarity=0.646 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (44)
T 2eof_A 8 TGEKPYECNECQKAFN 23 (44)
T ss_dssp SCCCSEECTTTCCEES
T ss_pred CCCCCeECCCCCcccC
Confidence 3455688888877644
No 115
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=53.16 E-value=7.6 Score=22.97 Aligned_cols=27 Identities=15% Similarity=0.523 Sum_probs=20.7
Q ss_pred Ccccccccccccc--CCceEEeccccccee
Q psy1385 40 IYPCGICHKEVHD--NDQAILCESGCNFWY 67 (69)
Q Consensus 40 ~ypCG~C~~eV~D--~ddAI~CE~~C~~WF 67 (69)
+.-|..|...+.- .++.+.|.. |..+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~-cg~~Y 36 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKG-DRLAF 36 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETT-TTEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCC-CCcEe
Confidence 5678888876554 467899987 99888
No 116
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=53.13 E-value=9.4 Score=17.50 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=10.3
Q ss_pred CCCCcccccccccccc
Q psy1385 37 APPIYPCGICHKEVHD 52 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D 52 (69)
....|.|..|.+....
T Consensus 8 ~~~~~~C~~C~k~f~~ 23 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQ 23 (42)
T ss_dssp SSCCEECSSSCCEESS
T ss_pred CCCCeECCCCCcccCC
Confidence 3456788888776543
No 117
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.80 E-value=11 Score=19.64 Aligned_cols=31 Identities=19% Similarity=0.446 Sum_probs=21.7
Q ss_pred CCCCcccccccccccc------------C---CceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHD------------N---DQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D------------~---ddAI~CE~~C~~WFH 68 (69)
..-.|.|.+|.+.... . +....|+. |.+-|-
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~-C~k~f~ 49 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF-CGKRFE 49 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT-TCCEES
T ss_pred CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC-CCchhC
Confidence 3456889999876543 1 45688888 888774
No 118
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.50 E-value=22 Score=18.46 Aligned_cols=34 Identities=21% Similarity=0.582 Sum_probs=22.3
Q ss_pred CCCCCCCcccccccccccc------------CC----ceEEecccccceee
Q psy1385 34 NPNAPPIYPCGICHKEVHD------------ND----QAILCESGCNFWYH 68 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV~D------------~d----dAI~CE~~C~~WFH 68 (69)
.......|.|..|.+.... .+ ....|+. |.+-|-
T Consensus 9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~-C~~~f~ 58 (86)
T 1x6h_A 9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK-CGKTFT 58 (86)
T ss_dssp TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS-SCCEES
T ss_pred eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCC-CCChhC
Confidence 3445667889999775433 12 4578887 887763
No 119
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=52.26 E-value=9.5 Score=17.92 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2em9_A 8 TGEKPYNCKECGKSFR 23 (46)
T ss_dssp CCCCSEECSSSCCEES
T ss_pred CCCcCeECCccccccC
Confidence 3445688888877544
No 120
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=52.18 E-value=2.6 Score=25.96 Aligned_cols=33 Identities=18% Similarity=0.578 Sum_probs=23.2
Q ss_pred CCCCCccccccccccccCC-ceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
+++....|-+|+...+..+ .++-||+ |...|-|
T Consensus 3 ~~~~~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 36 (89)
T 2ebl_A 3 SGSSGIECVVCGDKSSGKHYGQFTCEG-CKSFFKR 36 (89)
T ss_dssp CCCSSCBCTTTCSBCCSEETTEECCHH-HHHHHHH
T ss_pred CCCCCCCCcEeCCCCcceEeCchhhHH-hhhhhhe
Confidence 3455668999998766644 4777887 8887744
No 121
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=52.08 E-value=9.5 Score=17.92 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=10.7
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFS 23 (46)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCceECCCCCchhC
Confidence 3455688888887544
No 122
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.95 E-value=9.7 Score=17.79 Aligned_cols=17 Identities=12% Similarity=0.470 Sum_probs=11.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQ 24 (44)
T ss_dssp SCCCSEECSSSSCEESS
T ss_pred CCCCCeECCCCCchhCC
Confidence 34456888888776544
No 123
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.16 E-value=10 Score=17.86 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=11.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTI 24 (46)
T ss_dssp SSCCSEECSSSCCEESS
T ss_pred CCCcCeECCCCChhhCC
Confidence 34456888888876543
No 124
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.08 E-value=10 Score=17.82 Aligned_cols=16 Identities=19% Similarity=0.590 Sum_probs=10.6
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2ytf_A 8 TGEKPFECSECQKAFN 23 (46)
T ss_dssp CCCCSEECSSSCCEES
T ss_pred CCCCCcCCCCCCcccC
Confidence 3455688888887543
No 125
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.67 E-value=11 Score=17.83 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=10.9
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~~~~~C~~C~k~F~ 23 (46)
T 2emi_A 8 TGERHYECSECGKAFI 23 (46)
T ss_dssp SSCCCEECSSSCCEES
T ss_pred CCCCCCCCCCCCcccC
Confidence 3455688888887543
No 126
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.47 E-value=10 Score=17.78 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=10.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRA 24 (46)
T ss_dssp CCCCCEECTTSCCEESS
T ss_pred CCCCCeeccccCChhcC
Confidence 34456888888876443
No 127
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=50.01 E-value=14 Score=21.43 Aligned_cols=39 Identities=28% Similarity=0.475 Sum_probs=28.1
Q ss_pred eeeCCCCCCCCCCcccccccccccc-CCceEEecccccceeeC
Q psy1385 28 MVFNPQNPNAPPIYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 28 ~~fn~q~~~s~~~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
-.|.+.+-. ..--|..|.+.+-- -.+++.|+. |.+=.|+
T Consensus 24 H~F~~~~f~--~pt~C~~C~~~lwGl~kqG~~C~~-C~~~~Hk 63 (77)
T 2enn_A 24 HEFTATFFP--QPTFCSVCHEFVWGLNKQGYQCRQ-CNAAIHK 63 (77)
T ss_dssp CEEEEECCS--SCEECSSSCCEECCTTCCEEECSS-SCCEEES
T ss_pred CccEEEcCC--CCcCccccChhhccccccccCcCC-CCCcCCH
Confidence 345544433 34569999998865 479999998 9988885
No 128
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.99 E-value=15 Score=21.45 Aligned_cols=28 Identities=32% Similarity=0.654 Sum_probs=23.1
Q ss_pred cccccccccccc-CCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
--|..|.+.+-- -.++..|+. |.+=+|+
T Consensus 29 t~C~~C~~~lwGl~kqg~~C~~-C~~~~Hk 57 (83)
T 2yuu_A 29 TFCSVCKDFVWGLNKQGYKCRQ-CNAAIHK 57 (83)
T ss_dssp CCCSSSCCCCCSSSCCEEEETT-TCCEECT
T ss_pred cChhhcChhhccccccccccCC-cCCeeCh
Confidence 459999998864 479999998 9988885
No 129
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=49.86 E-value=12 Score=19.42 Aligned_cols=28 Identities=25% Similarity=0.541 Sum_probs=22.5
Q ss_pred cccccccccccc-CCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
--|..|++.+-- -.++..|+. |..=.|+
T Consensus 12 t~C~~C~~~l~g~~~qg~~C~~-C~~~~H~ 40 (50)
T 1ptq_A 12 TFCDHCGSLLWGLVKQGLKCED-CGMNVHH 40 (50)
T ss_dssp CBCTTTCCBCCSSSSCEEEETT-TCCEECH
T ss_pred CCcCCCCceeeccCCccCEeCC-CCCeECH
Confidence 459999998864 479999998 9887774
No 130
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.64 E-value=12 Score=17.66 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYN 23 (46)
T ss_dssp SSCCSEEETTTTEEES
T ss_pred CCCCCeECCCCCCccC
Confidence 3455688888877543
No 131
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.50 E-value=7.9 Score=18.04 Aligned_cols=15 Identities=27% Similarity=0.487 Sum_probs=9.5
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
....|.|..|.+...
T Consensus 9 ~~k~~~C~~C~k~f~ 23 (44)
T 2eoj_A 9 GENPYECCECGKVFS 23 (44)
T ss_dssp SCCSCEETTTTEECS
T ss_pred CCcCeeCCCCCCccC
Confidence 345677877776543
No 132
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.43 E-value=11 Score=17.69 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (46)
T 2emy_A 8 TGENPYECHECGKAFS 23 (46)
T ss_dssp CSSCCEECSSSCCEES
T ss_pred CCCcCcCCCCCCcccC
Confidence 3445688888887544
No 133
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.39 E-value=11 Score=19.62 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=21.7
Q ss_pred CCCCCCccccccccccccCCc--eEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQ--AILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~dd--AI~CE~~C~~WFHR 69 (69)
......+.|.||.+++.+... ...-...|.--||+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 10 LRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp CCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred cCCCCCCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 344667899999999887421 11122357666663
No 134
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.99 E-value=12 Score=17.58 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=11.2
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2yts_A 7 GTGEKPYICNECGKSFI 23 (46)
T ss_dssp CCSCCSEECSSSCCEES
T ss_pred CCCCcCEECCCCChhhC
Confidence 34455688888887643
No 135
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.93 E-value=12 Score=17.50 Aligned_cols=17 Identities=18% Similarity=0.481 Sum_probs=10.8
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (44)
T 2emb_A 8 HTRKRYECSKCQATFNL 24 (44)
T ss_dssp CCCSSEECTTTCCEESC
T ss_pred CCCCCeECCCCCCccCC
Confidence 34456888888776543
No 136
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=48.81 E-value=9.6 Score=22.70 Aligned_cols=17 Identities=18% Similarity=0.438 Sum_probs=13.1
Q ss_pred cccCCceEEecc-cccce
Q psy1385 50 VHDNDQAILCES-GCNFW 66 (69)
Q Consensus 50 V~D~ddAI~CE~-~C~~W 66 (69)
|.....+|+|+. .|.+|
T Consensus 12 ~~~~~~WVQCd~p~C~KW 29 (69)
T 2e61_A 12 FGQCLVWVQCSFPNCGKW 29 (69)
T ss_dssp CCCCCCEEECSSTTTCCE
T ss_pred CCCCCeEEEeCccccCcc
Confidence 444689999993 49999
No 137
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.06 E-value=12 Score=17.56 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=10.7
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2em7_A 8 TGEKPYKCEECGKGFI 23 (46)
T ss_dssp SCCCSEECSSSCCEES
T ss_pred CCCcCccCCCccchhC
Confidence 3445688888887543
No 138
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=48.02 E-value=16 Score=20.25 Aligned_cols=41 Identities=20% Similarity=0.372 Sum_probs=29.1
Q ss_pred CceeeCCCCCCCCCCcccccccccccc-CCceEEecccccceeeC
Q psy1385 26 QAMVFNPQNPNAPPIYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 26 ~p~~fn~q~~~s~~~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
.+-.|.+.+-.. .--|..|.+.+-- -.++..|+. |..=.|+
T Consensus 11 ~~H~F~~~~~~~--pt~C~~C~~~l~Gl~~qg~~C~~-C~~~~Hk 52 (65)
T 2enz_A 11 MPHRFKVYNYKS--PTFCEHCGTLLWGLARQGLKCDA-CGMNVHH 52 (65)
T ss_dssp CCCCEEECCCCS--CCBCSSSCCBCCCSSSCSEEESS-SCCEECT
T ss_pred CCCccEeEcCCC--CcCchhcChhheecCCcccccCC-CCCccCH
Confidence 344555554443 3459999998864 479999998 9988885
No 139
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=47.66 E-value=16 Score=19.57 Aligned_cols=27 Identities=19% Similarity=0.711 Sum_probs=16.7
Q ss_pred Ccccccccccccc------------CCceEEeccccccee
Q psy1385 40 IYPCGICHKEVHD------------NDQAILCESGCNFWY 67 (69)
Q Consensus 40 ~ypCG~C~~eV~D------------~ddAI~CE~~C~~WF 67 (69)
.|.|.+|.+.... .+....|+. |.+-|
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~-C~k~f 41 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI-CGRKF 41 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT-TCCEE
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCC-CCCcc
Confidence 4677777665433 355567776 77665
No 140
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.48 E-value=13 Score=17.51 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFR 23 (46)
T ss_dssp TCCCCEECTTTCCEES
T ss_pred CCCCCeECCCCCchhC
Confidence 3455688888877543
No 141
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=47.40 E-value=7.7 Score=20.54 Aligned_cols=34 Identities=15% Similarity=0.375 Sum_probs=21.4
Q ss_pred CCCCCCccccccccccccC---CceEEecccccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDN---DQAILCESGCNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~---ddAI~CE~~C~~WFHR 69 (69)
......+.|.+|.+++.+. ++.+. ...|.--||+
T Consensus 5 ~~~~~~~~C~IC~~~~~~~~~~~~~~~-~~~CgH~fc~ 41 (71)
T 3ng2_A 5 LRPSGTVSCPICMDGYSEIVQNGRLIV-STECGHVFCS 41 (71)
T ss_dssp -CCTTCCBCTTTCCBHHHHHTTTCCEE-ECTTSCEEEH
T ss_pred CCCCCCCCCcccChhhhccccccCCeE-eCCCCChHhH
Confidence 3456788999999998773 23322 2347666663
No 142
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.27 E-value=12 Score=17.68 Aligned_cols=17 Identities=12% Similarity=0.294 Sum_probs=11.2
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2em5_A 7 GSSTKSHQCHECGRGFT 23 (46)
T ss_dssp CCCSCSEECSSSCCEES
T ss_pred CCCCCCeECCcCCCccC
Confidence 34455688888887644
No 143
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.10 E-value=14 Score=17.36 Aligned_cols=16 Identities=25% Similarity=0.546 Sum_probs=10.1
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~~~~~C~~C~k~f~ 23 (46)
T 2en6_A 8 SGEKPYGCNECGKTFS 23 (46)
T ss_dssp CSSCCEEETTTTEEES
T ss_pred CCCcCeECCCCCcccC
Confidence 3445677888876543
No 144
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.78 E-value=14 Score=17.40 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=10.4
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (46)
T 2emf_A 8 TGGKHFECTECGKAFT 23 (46)
T ss_dssp SSSCCEECSSSCCEES
T ss_pred CCCCCeECCCCCchhC
Confidence 3445688888887643
No 145
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.74 E-value=13 Score=17.54 Aligned_cols=16 Identities=25% Similarity=0.683 Sum_probs=10.7
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2eml_A 8 TGEKPYECSVCGKAFS 23 (46)
T ss_dssp SSCCSEECSSSCCEES
T ss_pred CCCCCeeCCCcCCccC
Confidence 3455688888887544
No 146
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=46.56 E-value=8.3 Score=24.30 Aligned_cols=39 Identities=26% Similarity=0.704 Sum_probs=27.7
Q ss_pred cCCCceeeCCCCCCCCCCccccccccccccCCceEEecc-ccc
Q psy1385 23 PENQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCES-GCN 64 (69)
Q Consensus 23 p~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~-~C~ 64 (69)
...++..|+=+... ...|-.||..+.+..+...|.. +|+
T Consensus 35 ~~~~~V~F~H~~H~---~~~C~~CH~~~~~~~~~~~C~~~~CH 74 (130)
T 2a3m_A 35 NTKMPVIFNHSSHS---SYQCADCHHPVDGKENLAKCATAGCH 74 (130)
T ss_dssp SSSSCEEECGGGGT---TSCGGGTSCCBTTBCCCSCTTSTTSS
T ss_pred CCCCCcccCHHHHC---CCCchhcCCCCCCCCccccccccccc
Confidence 45688899988773 3579999999876544445653 576
No 147
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.43 E-value=14 Score=17.41 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=10.5
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2emp_A 8 TGVKPYMCNECGKAFS 23 (46)
T ss_dssp SCCCSEECSSSCCEES
T ss_pred CCCcCeECCCCCchhC
Confidence 3445688888887643
No 148
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.73 E-value=14 Score=17.42 Aligned_cols=17 Identities=24% Similarity=0.548 Sum_probs=10.5
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVL 24 (46)
T ss_dssp SSCCSEEETTTTEEESS
T ss_pred CCCCCeECcccChhhCC
Confidence 34456788888765443
No 149
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=45.66 E-value=14 Score=17.47 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=10.8
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (46)
T 2emj_A 8 TGEKPFECAECGKSFS 23 (46)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCEECCCCCcccC
Confidence 3455688888887644
No 150
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.60 E-value=7.5 Score=17.87 Aligned_cols=17 Identities=24% Similarity=0.548 Sum_probs=11.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 7 ~~~k~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQ 23 (42)
T ss_dssp CSCCSBCCTTTTCCBSS
T ss_pred CCCCCeeCCCccchhCC
Confidence 34567889999876544
No 151
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=45.57 E-value=10 Score=18.92 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=18.6
Q ss_pred CCCCCCccccccccc-------------cccCCceEEeccccccee
Q psy1385 35 PNAPPIYPCGICHKE-------------VHDNDQAILCESGCNFWY 67 (69)
Q Consensus 35 ~~s~~~ypCG~C~~e-------------V~D~ddAI~CE~~C~~WF 67 (69)
......|.|..|.+. ++..+....|+. |.+=|
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~-C~k~F 51 (54)
T 2eps_A 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV-WVSGP 51 (54)
T ss_dssp CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS-SCCSS
T ss_pred CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC-CCCCC
Confidence 344456778888653 333455566666 66544
No 152
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.09 E-value=15 Score=17.38 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=10.5
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2em4_A 8 TGQRPYECIECGKAFK 23 (46)
T ss_dssp CCSSSEECSSSCCEES
T ss_pred CCCcCcCCCCCCCccC
Confidence 3445688888887644
No 153
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.93 E-value=14 Score=17.35 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=10.8
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~~~~~C~~C~k~f~ 23 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFT 23 (46)
T ss_dssp SSSCSEECSSSCCEES
T ss_pred CCCCCEeCCcCCCccC
Confidence 3455688888887643
No 154
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=44.67 E-value=18 Score=20.22 Aligned_cols=28 Identities=21% Similarity=0.451 Sum_probs=22.9
Q ss_pred cccccccccccc-CCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
--|..|.+.+-- -.++..|+. |.+=.|+
T Consensus 25 t~C~~C~~~l~Gl~~qg~~C~~-C~~~~Hk 53 (66)
T 1y8f_A 25 TYCYECEGLLWGIARQGMRCTE-CGVKCHE 53 (66)
T ss_dssp CCCTTTCCCCCSSCCEEEEETT-TCCEECT
T ss_pred cChhhcChhhcccCcceeEcCC-CCCeeCH
Confidence 459999998854 469999998 9888885
No 155
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.43 E-value=24 Score=19.81 Aligned_cols=24 Identities=17% Similarity=0.515 Sum_probs=14.9
Q ss_pred CCCcccccccccccc-------CCceEEecc
Q psy1385 38 PPIYPCGICHKEVHD-------NDQAILCES 61 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D-------~ddAI~CE~ 61 (69)
..-|.|-.|.+.+.+ .|..|+|+.
T Consensus 40 ~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~ 70 (82)
T 2co8_A 40 RSCFRCHTCEATLWPGGYEQHPGDGHFYCLQ 70 (82)
T ss_dssp TTTCBCSSSCCBCCTTSEECCTTTCCCEETT
T ss_pred CCcCEEcCCCCCcCCCceeEeCcCCEEEChH
Confidence 345777777766544 255677765
No 156
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=44.42 E-value=15 Score=17.36 Aligned_cols=16 Identities=25% Similarity=0.569 Sum_probs=10.9
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFS 23 (46)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCeECCCCCcccC
Confidence 3455688888887543
No 157
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=44.03 E-value=16 Score=17.14 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=10.9
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2ema_A 8 TGEKRYKCNECGKVFS 23 (46)
T ss_dssp TTSCCEECSSSCCEES
T ss_pred CCCcCcCCCCCcchhC
Confidence 3455688888887643
No 158
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.00 E-value=15 Score=17.14 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=11.4
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCW 24 (46)
T ss_dssp CCCCSEECSSSCCEESS
T ss_pred CCCCCeeCCCCCCccCC
Confidence 34556888888876543
No 159
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.88 E-value=14 Score=17.34 Aligned_cols=17 Identities=29% Similarity=0.657 Sum_probs=11.3
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2emh_A 8 TGERPYICTVCGKAFTD 24 (46)
T ss_dssp SCCCSEECTTTCCEESS
T ss_pred CCCCCcCCCCCCchhCC
Confidence 34556888888876543
No 160
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.88 E-value=30 Score=18.30 Aligned_cols=29 Identities=14% Similarity=0.340 Sum_probs=18.9
Q ss_pred CCCCCCccccccccccccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
......+.|.+|.+.+.+ .+.- .|.--||
T Consensus 15 ~~~~~~~~C~IC~~~~~~---~~~~--~CgH~fC 43 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQK---PVTI--DCGHNFC 43 (73)
T ss_dssp CCCCCCCBCTTTCSBCSS---EEEC--TTCCEEE
T ss_pred HhCccCCEeccCCcccCC---eEEc--CCCChhh
Confidence 344567899999988774 3222 4665555
No 161
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.77 E-value=16 Score=17.22 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=11.4
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2ytp_A 7 GTGERHYECSECGKAFA 23 (46)
T ss_dssp SCCCCCEECSSSCCEES
T ss_pred cCCCCCeECCcCCcccC
Confidence 34455688888887643
No 162
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.76 E-value=8.8 Score=17.61 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=11.8
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (42)
T 2yte_A 6 SGEKPYSCAECKETFSD 22 (42)
T ss_dssp CSCCSCBCTTTCCBCSS
T ss_pred CCCCCeECCCCCCccCC
Confidence 34556889999876544
No 163
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.75 E-value=15 Score=17.20 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=11.9
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eme_A 7 GSGEKPYVCDYCGKAFGL 24 (46)
T ss_dssp TCCCCSEECSSSCCEESS
T ss_pred CCCCCCeECCCCChhhCC
Confidence 344556888888876543
No 164
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.58 E-value=8.9 Score=18.18 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~F~~ 24 (46)
T 2elz_A 7 GSVEKPYKCEDCGKGYNR 24 (46)
T ss_dssp CCCCSSCBCSSSCCBCSS
T ss_pred CCCCCCeeCcccCchhCC
Confidence 344567899999886543
No 165
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=43.43 E-value=21 Score=19.00 Aligned_cols=20 Identities=15% Similarity=0.414 Sum_probs=15.5
Q ss_pred cccccccccccCCceEEecc
Q psy1385 42 PCGICHKEVHDNDQAILCES 61 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~ 61 (69)
.|..|++.|.+.+..|.-..
T Consensus 7 ~C~~C~~~I~~~~~~~~a~~ 26 (72)
T 1x4k_A 7 GCQECKKTIMPGTRKMEYKG 26 (72)
T ss_dssp CBSSSCCCCCSSSCEEEETT
T ss_pred CCccCCCcccCCceEEEECc
Confidence 68999999998777776443
No 166
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.29 E-value=9.2 Score=18.21 Aligned_cols=18 Identities=22% Similarity=0.512 Sum_probs=12.3
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRV 24 (46)
T ss_dssp CSSCCSCBCSSSCCBCSS
T ss_pred CCCCcccCCCCCCcccCc
Confidence 344567899999876543
No 167
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.26 E-value=22 Score=20.86 Aligned_cols=29 Identities=21% Similarity=0.511 Sum_probs=23.5
Q ss_pred Ccccccccccccc-CCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
.--|..|.+.+-- -.++..|+. |.+=+|+
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~-C~~~~Hk 57 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDT-CDMNVHK 57 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSS-SCCEEET
T ss_pred CcCCcccCccccccccCCCcCCC-cCCccCH
Confidence 3459999998865 479999998 9988885
No 168
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.08 E-value=16 Score=17.09 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=10.2
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (45)
T 2epu_A 8 TGQKPFECTHCGKSFR 23 (45)
T ss_dssp CSCCSEEETTTTEEES
T ss_pred CCCcCccCCCCCCccC
Confidence 3445677888876543
No 169
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=43.07 E-value=17 Score=27.36 Aligned_cols=29 Identities=21% Similarity=0.429 Sum_probs=24.2
Q ss_pred Cccccccccccc-cCCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVH-DNDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~-D~ddAI~CE~~C~~WFHR 69 (69)
.--|..|++.+- =..+...|.. |.+.+|+
T Consensus 529 ~t~C~~C~~~l~gl~~qg~~C~~-C~~~vHk 558 (587)
T 3ky9_A 529 TTSCKACQMLLRGTFYQGYRCHR-CRASAHK 558 (587)
T ss_dssp CCBCTTTCSBCCSSSCCEEEETT-TCCEECS
T ss_pred CcccccccccccccccCCcCCCC-CCCccch
Confidence 457999999873 3579999999 9999996
No 170
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.97 E-value=16 Score=17.21 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=11.1
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 8 SGERPYGCNECGKNFGR 24 (46)
T ss_dssp SCCCCEECSSSCCEESS
T ss_pred CCCCCEEccccCcccCC
Confidence 34556888888876443
No 171
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.95 E-value=16 Score=17.12 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=10.6
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~F~ 23 (44)
T 2epv_A 8 SGEKPYECNECGKAFI 23 (44)
T ss_dssp CCCCSEECSSSCCEES
T ss_pred CCCcCeECCCCCcccC
Confidence 3455688888877654
No 172
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.93 E-value=12 Score=20.82 Aligned_cols=11 Identities=27% Similarity=1.189 Sum_probs=5.1
Q ss_pred Ccccccccccc
Q psy1385 40 IYPCGICHKEV 50 (69)
Q Consensus 40 ~ypCG~C~~eV 50 (69)
.|.|.+|.+..
T Consensus 16 ~~~C~~C~~~f 26 (107)
T 1wjp_A 16 VYQCRLCNAKL 26 (107)
T ss_dssp CCBCTTTCCBC
T ss_pred CeECCCCCCcc
Confidence 34455554433
No 173
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.89 E-value=2.6 Score=23.74 Aligned_cols=34 Identities=15% Similarity=0.377 Sum_probs=23.2
Q ss_pred CCCCCCCccccccccccc-c------------C-CceEEecccccceee
Q psy1385 34 NPNAPPIYPCGICHKEVH-D------------N-DQAILCESGCNFWYH 68 (69)
Q Consensus 34 ~~~s~~~ypCG~C~~eV~-D------------~-ddAI~CE~~C~~WFH 68 (69)
.......|.|.+|.+... . . +....|+. |.+-|-
T Consensus 18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~-C~k~F~ 65 (98)
T 2gqj_A 18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH-CRKQFK 65 (98)
T ss_dssp TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS-SCCCCS
T ss_pred HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC-CCCccC
Confidence 344566799999998776 3 2 44567777 777663
No 174
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=42.27 E-value=19 Score=20.87 Aligned_cols=26 Identities=38% Similarity=0.783 Sum_probs=21.8
Q ss_pred ccccccccccccCCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
--|..|.+.+ -.++..|+. |.+=.|+
T Consensus 36 t~C~~C~~~l--~~qG~kC~~-C~~~cHk 61 (72)
T 2fnf_X 36 GWCDLCGREV--LRQALRCAN-CKFTCHS 61 (72)
T ss_dssp CBCTTTSSBC--SSCCEECTT-SSCEECT
T ss_pred cchhhhhHHH--HhCcCccCC-CCCeech
Confidence 4599999999 779999998 9887774
No 175
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.01 E-value=16 Score=17.13 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=11.7
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQ 24 (46)
T ss_dssp SSCCSEECTTTCCEESS
T ss_pred CCCCCeECCCCCcccCC
Confidence 34556889888876544
No 176
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.97 E-value=18 Score=16.99 Aligned_cols=17 Identities=12% Similarity=0.243 Sum_probs=11.4
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2yso_A 8 SREKSHQCRECGEIFFQ 24 (46)
T ss_dssp SCCCCEECTTTCCEESS
T ss_pred CCCCCEEccccChhhCC
Confidence 34556888888876543
No 177
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=41.95 E-value=19 Score=18.49 Aligned_cols=24 Identities=21% Similarity=0.710 Sum_probs=18.2
Q ss_pred CCCCccccccccccc---cCCceEEec
Q psy1385 37 APPIYPCGICHKEVH---DNDQAILCE 60 (69)
Q Consensus 37 s~~~ypCG~C~~eV~---D~ddAI~CE 60 (69)
....|.|..|+++|. |.+-.+-|-
T Consensus 3 ~~~fY~C~~CGnivev~~~g~~~l~CC 29 (36)
T 1dxg_A 3 EGDVYKCELCGQVVKVLEEGGGTLVCC 29 (36)
T ss_dssp TTCEEECTTTCCEEEEEECCSSCEEET
T ss_pred cccEEEcCCCCcEEEEEeCCCcCEEeC
Confidence 356799999999887 566666663
No 178
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.90 E-value=17 Score=16.96 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=11.1
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQ 24 (46)
T ss_dssp SCCCSEECSSSCCEESS
T ss_pred CCCCCeeCCCCChhhCC
Confidence 34556888888876543
No 179
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.88 E-value=17 Score=17.03 Aligned_cols=17 Identities=29% Similarity=0.673 Sum_probs=11.5
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTK 24 (46)
T ss_dssp SCCCSEECSSSCCEESS
T ss_pred CCCcCcCCCCCCcccCC
Confidence 44566888888876443
No 180
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.81 E-value=36 Score=18.14 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=18.0
Q ss_pred CCCCccccccccccccCCceEEecccccceeeC
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
....+.|.+|.+.+.+- .+ ..|.-.||+
T Consensus 16 ~~~~~~C~IC~~~~~~p--~~---~~CgH~fC~ 43 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQP--LS---LDCGHSFCQ 43 (85)
T ss_dssp CCCCCCCTTTCSCCSSC--BC---CSSSCCBCT
T ss_pred ccCCCCCCCCCcccCCc--ee---CCCCCHHHH
Confidence 34578999999988652 22 246666653
No 181
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.54 E-value=17 Score=17.01 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=11.2
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHR 24 (46)
T ss_dssp CCCCSEECSSSCCEESS
T ss_pred CCCcCeECCCCCCeeCC
Confidence 34456888888876443
No 182
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.38 E-value=18 Score=17.04 Aligned_cols=18 Identities=17% Similarity=0.418 Sum_probs=11.8
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 7 GQKEKCFKCNKCEKTFSC 24 (46)
T ss_dssp CCCSCCEECSSSCCEESS
T ss_pred cCCCCCEECcCCCCcCCC
Confidence 344556888888876543
No 183
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=41.25 E-value=18 Score=19.99 Aligned_cols=29 Identities=24% Similarity=0.493 Sum_probs=23.1
Q ss_pred Ccccccccccccc-CCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
.--|..|.+.+-- ..++..|+. |.+=.|+
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~-C~~~~Hk 49 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCED-CGMNVHH 49 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETT-TCCEECH
T ss_pred CCcccccChhhhccCceeeECCC-CCCeEch
Confidence 3459999998854 468999998 9988884
No 184
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.21 E-value=17 Score=17.00 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=12.0
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2en8_A 7 GSGEKSHTCDECGKNFCY 24 (46)
T ss_dssp CCCCSSEECTTTCCEESS
T ss_pred CCCCCCeECCCcCcccCC
Confidence 344566888888876543
No 185
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.07 E-value=9.8 Score=17.94 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2enf_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCCCCSCBCSSSCCBCSS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 344567999999876443
No 186
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.07 E-value=18 Score=17.01 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=11.6
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTR 24 (46)
T ss_dssp CSCCCEECSSSCCEESS
T ss_pred CCCCCEECcccCCccCC
Confidence 34556888888876543
No 187
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.93 E-value=31 Score=18.49 Aligned_cols=29 Identities=14% Similarity=0.401 Sum_probs=18.7
Q ss_pred CCCCCCccccccccccccCCceEEecccccceee
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
......+.|.||.+.+.+ .+.- .|.--||
T Consensus 10 ~~~~~~~~C~IC~~~~~~---~~~~--~CgH~fC 38 (71)
T 2d8t_A 10 APSLTVPECAICLQTCVH---PVSL--PCKHVFC 38 (71)
T ss_dssp CSSSSCCBCSSSSSBCSS---EEEE--TTTEEEE
T ss_pred ccCCCCCCCccCCcccCC---CEEc--cCCCHHH
Confidence 345567899999988755 2322 4665565
No 188
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=40.92 E-value=15 Score=24.21 Aligned_cols=23 Identities=35% Similarity=0.827 Sum_probs=18.2
Q ss_pred cccc--cccccccC-CceEEecccccc
Q psy1385 42 PCGI--CHKEVHDN-DQAILCESGCNF 65 (69)
Q Consensus 42 pCG~--C~~eV~D~-ddAI~CE~~C~~ 65 (69)
-|.. |.+-|.++ +..-.||. |+.
T Consensus 45 aC~~~~CnKKv~~~~~g~~~Cek-C~~ 70 (181)
T 1l1o_C 45 ACPTQDCNKKVIDQQNGLYRCEK-CDT 70 (181)
T ss_dssp BCCSTTCCCBCEEETTTEEEETT-TTE
T ss_pred CCCchhcCCccccCCCCeEECCC-CCC
Confidence 5888 99999885 45678998 875
No 189
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=40.49 E-value=7.8 Score=19.27 Aligned_cols=19 Identities=26% Similarity=0.543 Sum_probs=14.2
Q ss_pred cccccccccccCCceEEecc
Q psy1385 42 PCGICHKEVHDNDQAILCES 61 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~ 61 (69)
.|..|++.|-.. +.|..++
T Consensus 5 ~C~~C~k~Vy~~-Ek~~~~g 23 (31)
T 1zfo_A 5 NCARCGKIVYPT-EKVNCLD 23 (31)
T ss_dssp BCSSSCSBCCGG-GCCCSSS
T ss_pred cCCccCCEEecc-eeEEECC
Confidence 699999999876 4455554
No 190
>2a66_A Orphan nuclear receptor NR5A2; protein-DNA complex, zinc finger, DNA- binding domain, transcription factor, FTZ-F1, C-terminal extension; 2.20A {Homo sapiens} PDB: 2ff0_A
Probab=40.46 E-value=3.8 Score=26.33 Aligned_cols=33 Identities=24% Similarity=0.569 Sum_probs=21.0
Q ss_pred CCCCCccccccccccccCC-ceEEecccccceeeC
Q psy1385 36 NAPPIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
++...-.|-+|+......+ .++-|++ |...|-|
T Consensus 5 ~~~~~~~C~VCgd~a~G~HyGv~sC~a-Ck~FFRR 38 (113)
T 2a66_A 5 DEDLEELCPVCGDKVSGYHYGLLTCES-CKGFFKR 38 (113)
T ss_dssp -----CBCTTTCCBEEEEETTEEEEHH-HHHHHHH
T ss_pred CCCCCCCCcEeCCCCcceeeCcccHHH-HHHHHhh
Confidence 4455678999997766543 5777888 9887744
No 191
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.40 E-value=19 Score=16.98 Aligned_cols=18 Identities=17% Similarity=0.431 Sum_probs=11.9
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2em2_A 7 GSGEKPFKCKECGKAFRQ 24 (46)
T ss_dssp CCCCCSEECSSSCCEESS
T ss_pred CCCCCCEECCcCCchhCC
Confidence 344556888888876543
No 192
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.32 E-value=18 Score=16.94 Aligned_cols=17 Identities=18% Similarity=0.434 Sum_probs=11.1
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~~~~~C~~C~k~f~ 23 (46)
T 2en1_A 7 GSGEKPFKCEECGKRFT 23 (46)
T ss_dssp CCCCCSEEETTTTEEES
T ss_pred CCCCCCeeCCCCCcccC
Confidence 34455688888887643
No 193
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.19 E-value=10 Score=17.88 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~F~~ 24 (46)
T 2ytn_A 7 GTGKKPYKCNECGKVFTQ 24 (46)
T ss_dssp CSCCSSCBCTTTCCBCSS
T ss_pred CCCCcCeECCCCCCeeCC
Confidence 344567899999876443
No 194
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=40.13 E-value=16 Score=23.30 Aligned_cols=25 Identities=16% Similarity=0.727 Sum_probs=20.4
Q ss_pred ccccccccccccCCceEEecccccce
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFW 66 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~W 66 (69)
+.|..|.......+....|+. |+..
T Consensus 3 ~~Cp~C~~~~~~~~~~~~C~~-~~~~ 27 (269)
T 1p91_A 3 FSCPLCHQPLSREKNSYICPQ-RHQF 27 (269)
T ss_dssp BBCTTTCCBCEEETTEEECTT-CCEE
T ss_pred ccCCCCCccceeCCCEEECCC-CCcC
Confidence 789999998877778899987 7654
No 195
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.11 E-value=12 Score=17.53 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=11.4
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSV 24 (46)
T ss_dssp CCCCSSEETTTTEECSS
T ss_pred CCCCCeECCCCChhhCC
Confidence 34556888888876543
No 196
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.76 E-value=11 Score=17.75 Aligned_cols=17 Identities=18% Similarity=0.399 Sum_probs=12.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2emg_A 8 TGENPFICSECGKVFTH 24 (46)
T ss_dssp CSCCSCBCTTTCCBCSS
T ss_pred CCCCCEECCccCcccCC
Confidence 34567999999886543
No 197
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=39.56 E-value=11 Score=17.83 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=11.8
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQ 24 (46)
T ss_dssp CCCCCCCCSSSCCCCSS
T ss_pred CCCcCeECCCCCcccCC
Confidence 34556899999876543
No 198
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.34 E-value=12 Score=17.22 Aligned_cols=17 Identities=29% Similarity=0.765 Sum_probs=11.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 7 ~~~k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRH 23 (42)
T ss_dssp SSSCCBCCSSSCCCBSS
T ss_pred CCCCCEECCCCCCccCC
Confidence 34557889999876554
No 199
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.22 E-value=20 Score=16.76 Aligned_cols=16 Identities=25% Similarity=0.538 Sum_probs=10.9
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2ene_A 8 TGEKPYKCNECGKVFR 23 (46)
T ss_dssp CCSSSEECSSSCCEES
T ss_pred CCCCCeECCCCCchhC
Confidence 3455688888887644
No 200
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.15 E-value=19 Score=16.85 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=11.9
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yu8_A 7 GTGEKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCCCSSEECSSSCCEESS
T ss_pred CCCCCCeECCcCCchhCC
Confidence 344566888888876543
No 201
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=39.13 E-value=13 Score=22.06 Aligned_cols=31 Identities=16% Similarity=0.502 Sum_probs=21.7
Q ss_pred CCCCCcccccccccccc-----CCceEEeccccccee
Q psy1385 36 NAPPIYPCGICHKEVHD-----NDQAILCESGCNFWY 67 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D-----~ddAI~CE~~C~~WF 67 (69)
.+...-.|-.|+..-.. .+..++|++ |..||
T Consensus 5 ~~~~~~~C~~C~t~~Tp~WR~gp~G~~LCNa-CGl~~ 40 (66)
T 4gat_A 5 EQNGPTTCTNCFTQTTPLWRRNPEGQPLCNA-CGLFL 40 (66)
T ss_dssp CSSSSCCCTTTCCCCCSSCEEETTTEEECHH-HHHHH
T ss_pred CCCCCCCCCCCCCCCCCcCCcCCCCCCccHH-HHHHH
Confidence 34456789999876543 255599999 98776
No 202
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.11 E-value=11 Score=21.76 Aligned_cols=29 Identities=21% Similarity=0.499 Sum_probs=23.5
Q ss_pred Ccccccccccccc-CCceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHD-NDQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D-~ddAI~CE~~C~~WFHR 69 (69)
.--|..|.+.+-- -.++..|+. |.+=+|+
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~-C~~~~Hk 57 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKN-CKTNIHE 57 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESS-SCCEECT
T ss_pred CcCchhcChhhccccCCccccCC-CCCccCh
Confidence 4569999998864 369999999 9988885
No 203
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=39.09 E-value=40 Score=18.95 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=9.3
Q ss_pred CCCcccccccccccc
Q psy1385 38 PPIYPCGICHKEVHD 52 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D 52 (69)
...-.|..|++.|.+
T Consensus 23 ~~~~~C~~C~~~I~~ 37 (89)
T 1x64_A 23 QRMPLCDKCGSGIVG 37 (89)
T ss_dssp CSCCBCTTTCCBCCS
T ss_pred CcCCCcccCCCEecc
Confidence 334567777777765
No 204
>1dsz_B RXR-alpha, retinoic acid receptor RXR-alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1by4_A* 1rxr_A 1r0n_A 1r0o_A 2nll_A*
Probab=39.06 E-value=3.8 Score=24.94 Aligned_cols=32 Identities=22% Similarity=0.527 Sum_probs=22.4
Q ss_pred CCCCccccccccccccCC-ceEEecccccceeeC
Q psy1385 37 APPIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
|.+.-.|-+|+..-+..+ .++-||+ |...|-|
T Consensus 2 s~~~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 34 (85)
T 1dsz_B 2 SFTKHICAICGDRSSGKHYGVYSCEG-CKGFFKR 34 (85)
T ss_dssp CSCCEECTTTCCEESSEETTEECCHH-HHHHHHH
T ss_pred CCCCCCCCEeCCCCCceeeCccchHH-HHHHHHH
Confidence 345568999998766543 4677887 8887744
No 205
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=38.91 E-value=12 Score=22.89 Aligned_cols=30 Identities=23% Similarity=0.568 Sum_probs=19.7
Q ss_pred CccccccccccccC-------------CceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDN-------------DQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~-------------ddAI~CE~~C~~WFHR 69 (69)
.-.|.||..++.+. ++...-...|.--||+
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~ 79 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHF 79 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEH
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECH
Confidence 45699999988763 2222333568888884
No 206
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.87 E-value=11 Score=17.72 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=12.6
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2epz_A 7 GTGEKPFDCIDCGKAFSD 24 (46)
T ss_dssp CCCCCSBCCTTTCCCBSS
T ss_pred cCCCCCeECCCCCceeCC
Confidence 344567999999886543
No 207
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.77 E-value=9.3 Score=17.95 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=11.5
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~k~~~C~~C~k~f~ 23 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFI 23 (46)
T ss_dssp SSCCSSCCSSSCCCCS
T ss_pred CCCCCcCCCCCCchhC
Confidence 3456799999987654
No 208
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.71 E-value=12 Score=17.72 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=12.1
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~f~ 23 (46)
T 2em6_A 7 GMGEKCYKCDVCGKEFS 23 (46)
T ss_dssp CCCCCCCBCSSSCCBCS
T ss_pred cCCCCCeECCCCCcccC
Confidence 34456799999988654
No 209
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.57 E-value=20 Score=16.67 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=11.0
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 8 ~~~~~~~C~~C~k~f~ 23 (46)
T 2eor_A 8 TGEKPYNCEECGKAFI 23 (46)
T ss_dssp SCCCSEECTTTCCEES
T ss_pred CCCcCccCCCCCCCcC
Confidence 3455688888887654
No 210
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=38.54 E-value=16 Score=25.36 Aligned_cols=27 Identities=33% Similarity=0.737 Sum_probs=23.4
Q ss_pred CCccccccccccccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
.+..|-+|.+.|. ..+.|.. |+.=||+
T Consensus 179 ~i~~C~iC~~iv~---~g~~C~~-C~~~~H~ 205 (238)
T 3nw0_A 179 AVKICNICHSLLI---QGQSCET-CGIRMHL 205 (238)
T ss_dssp TCCBCTTTCSBCS---SCEECSS-SCCEECH
T ss_pred CCCcCcchhhHHh---CCcccCc-cChHHHH
Confidence 4788999999999 5799988 9998884
No 211
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=38.53 E-value=26 Score=18.68 Aligned_cols=19 Identities=21% Similarity=0.485 Sum_probs=13.4
Q ss_pred cccccccccccCCceEEec
Q psy1385 42 PCGICHKEVHDNDQAILCE 60 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE 60 (69)
.|..|++.|..+++.|.-.
T Consensus 4 ~C~~C~~~I~~~~~~v~a~ 22 (65)
T 2iyb_E 4 VCQGCHNAIDPEVQRVTYN 22 (65)
T ss_dssp ECTTTSSEECTTSCEEEET
T ss_pred CCcCCCCeeccCceEEEEC
Confidence 4788888888665666544
No 212
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=38.47 E-value=12 Score=22.71 Aligned_cols=8 Identities=50% Similarity=1.190 Sum_probs=0.0
Q ss_pred cccccccc
Q psy1385 41 YPCGICHK 48 (69)
Q Consensus 41 ypCG~C~~ 48 (69)
|.|..|.+
T Consensus 22 ~~C~~C~~ 29 (190)
T 2i13_A 22 YACPECGK 29 (190)
T ss_dssp --------
T ss_pred CcCCCCcc
Confidence 44444433
No 213
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.02 E-value=42 Score=17.37 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=18.9
Q ss_pred CCCCCccccccccccccCCceEEecccccceee
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.....+.|.||...+.| ..++ .|.-.||
T Consensus 16 ~~~~~~~C~IC~~~~~~--p~~~---~CgH~fC 43 (63)
T 2ysj_A 16 KLQEEVICPICLDILQK--PVTI---DCGHNFC 43 (63)
T ss_dssp CCCCCCBCTTTCSBCSS--CEEC---TTSSEEC
T ss_pred hCccCCCCCcCCchhCC--eEEe---CCCCcch
Confidence 34567899999988765 3332 5766665
No 214
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.98 E-value=23 Score=16.37 Aligned_cols=17 Identities=18% Similarity=0.540 Sum_probs=11.6
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 6 ~~~k~~~C~~C~k~f~~ 22 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSS 22 (44)
T ss_dssp SSCCCEECSSSSCEESS
T ss_pred CCCcCccCCCCCcccCC
Confidence 44556888888876543
No 215
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=37.59 E-value=12 Score=17.63 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=12.7
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSR 24 (46)
T ss_dssp CCCCCSBCCSSSCCCBSS
T ss_pred CCCCCCcccCccCcccCC
Confidence 344567999999887554
No 216
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.24 E-value=13 Score=17.40 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=12.1
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq4_A 7 GTGEKLYNCKECGKSFSR 24 (46)
T ss_dssp SSCCCCCCBTTTTBCCSC
T ss_pred CCCCCCeECCCCCCccCc
Confidence 344556889999876543
No 217
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.23 E-value=20 Score=15.76 Aligned_cols=17 Identities=24% Similarity=0.573 Sum_probs=11.7
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (36)
T 2els_A 5 SSGKIFTCEYCNKVFKF 21 (36)
T ss_dssp SCCCCEECTTTCCEESS
T ss_pred CCCCCEECCCCCceeCC
Confidence 34557889888876543
No 218
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.18 E-value=13 Score=17.52 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=11.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSS 24 (46)
T ss_dssp SCCCSCBCSSSCCBCSC
T ss_pred CCCCCcCCCccChhhCC
Confidence 44556899999876543
No 219
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.17 E-value=13 Score=17.37 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=11.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTW 24 (46)
T ss_dssp SSCCSCBCSSSCCBCSS
T ss_pred CCCCCccCCccChhhCC
Confidence 34556899999886543
No 220
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.15 E-value=49 Score=17.71 Aligned_cols=23 Identities=17% Similarity=0.569 Sum_probs=12.0
Q ss_pred CCcccccccccccc-----CCceEEecc
Q psy1385 39 PIYPCGICHKEVHD-----NDQAILCES 61 (69)
Q Consensus 39 ~~ypCG~C~~eV~D-----~ddAI~CE~ 61 (69)
.-|.|-.|++.+.+ .|..+.|+.
T Consensus 38 ~CF~C~~C~~~L~~~~~~~~~g~~yC~~ 65 (77)
T 1g47_A 38 QCFVCAQCFQQFPEGLFYEFEGRKYCEH 65 (77)
T ss_dssp TTCCCTTTCCCCGGGCSEEETTEEECHH
T ss_pred ccCeECCCCCCCCCCCeEeECCeEeCHH
Confidence 34566666655544 244555543
No 221
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.15 E-value=13 Score=17.45 Aligned_cols=18 Identities=17% Similarity=0.181 Sum_probs=12.5
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~~~~~C~~C~k~f~~ 24 (46)
T 2eop_A 7 GTGEKPHECRECGKSFSF 24 (46)
T ss_dssp CCCCCSCBCTTTCCBCSS
T ss_pred cCCCCCeeCCCCCchhCC
Confidence 344567999999886544
No 222
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.11 E-value=11 Score=17.85 Aligned_cols=18 Identities=17% Similarity=0.379 Sum_probs=12.5
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGR 24 (46)
T ss_dssp SSCCCSCCCSSSCCCCSS
T ss_pred CCCCCCeECCCCCcccCC
Confidence 344567999999886544
No 223
>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A*
Probab=36.92 E-value=3.4 Score=31.11 Aligned_cols=29 Identities=24% Similarity=0.603 Sum_probs=21.5
Q ss_pred CccccccccccccCCc-eEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDNDQ-AILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~dd-AI~CE~~C~~WFHR 69 (69)
.-.|-+|+..-.-.+- ++-||+ |..+|-|
T Consensus 137 ~~~C~VCg~~a~g~hygv~sC~~-Ck~FFrR 166 (467)
T 3dzy_A 137 KHICAICGDRSSGKHYGVYSCEG-CKGFFKR 166 (467)
T ss_dssp CEECTTTSSEECSEETTEECCHH-HHHHHHH
T ss_pred CCcceeCCCCCCCCcCCCcchhh-hhHhccc
Confidence 3459999987766554 556888 9988865
No 224
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=36.72 E-value=23 Score=21.93 Aligned_cols=23 Identities=30% Similarity=0.873 Sum_probs=12.0
Q ss_pred cccccccccccCCceEEecccccc
Q psy1385 42 PCGICHKEVHDNDQAILCESGCNF 65 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~~C~~ 65 (69)
.|..|+.++.-+.....|+. |++
T Consensus 4 ~CP~C~~~l~~~~~~~~C~~-C~~ 26 (81)
T 2jrp_A 4 TCPVCHHALERNGDTAHCET-CAK 26 (81)
T ss_dssp CCSSSCSCCEECSSEEECTT-TCC
T ss_pred CCCCCCCccccCCCceECcc-ccc
Confidence 45555555554444445555 543
No 225
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.47 E-value=13 Score=17.51 Aligned_cols=18 Identities=22% Similarity=0.617 Sum_probs=12.6
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~F~~ 24 (46)
T 2enh_A 7 GTGEKPYECDVCRKAFSH 24 (46)
T ss_dssp CCCSSSCBCTTTCCBCSS
T ss_pred cCCCCCcCCCCcCchhCC
Confidence 344567999999986544
No 226
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.19 E-value=12 Score=17.65 Aligned_cols=18 Identities=22% Similarity=0.464 Sum_probs=12.3
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eoh_A 7 GSGKKPYECKECRKTFIQ 24 (46)
T ss_dssp CCCSCSCCCSSSCCCCSS
T ss_pred cCCCCCcCCCCcCchhCC
Confidence 344567899999876543
No 227
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.13 E-value=13 Score=17.52 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=12.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRA 24 (46)
T ss_dssp CCSCCCCCTTTTCCCSS
T ss_pred CCCCCeECCcCChhhCC
Confidence 34567999999886543
No 228
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.06 E-value=25 Score=18.72 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=14.4
Q ss_pred cccccccccccCCceEEec
Q psy1385 42 PCGICHKEVHDNDQAILCE 60 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE 60 (69)
.|..|++.|.+.+..|.-.
T Consensus 7 ~C~~C~~~I~~~~~~~~a~ 25 (72)
T 1wyh_A 7 GCSACGETVMPGSRKLEYG 25 (72)
T ss_dssp BCSSSCCBCCSSSCEECST
T ss_pred CCccCCCccccCccEEEEC
Confidence 6899999999876666543
No 229
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=36.02 E-value=21 Score=19.96 Aligned_cols=19 Identities=32% Similarity=0.436 Sum_probs=13.7
Q ss_pred cccccCCceEEeccccccee
Q psy1385 48 KEVHDNDQAILCESGCNFWY 67 (69)
Q Consensus 48 ~eV~D~ddAI~CE~~C~~WF 67 (69)
+|=.|+-+-|.||. |+..|
T Consensus 3 ~~~~~~~~yl~CE~-C~~~~ 21 (39)
T 2l9z_A 3 KENMATLFTIWCTL-CDRAY 21 (39)
T ss_dssp CCCSCCSCSEEEGG-GTEEE
T ss_pred cccchhhhhhHHHH-Hhhhc
Confidence 44455667799999 98765
No 230
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=35.92 E-value=3.4 Score=25.18 Aligned_cols=28 Identities=25% Similarity=0.708 Sum_probs=19.1
Q ss_pred ccccccccccccCC-ceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
..|-+|+..-+..+ .++-|++ |..+|-|
T Consensus 3 ~~C~VCg~~a~g~hyGv~sC~~-Ck~FFRR 31 (90)
T 3g9m_A 3 HMCLVCSDEASGCHYGVLTCGS-CKVFFKR 31 (90)
T ss_dssp CBCTTTCSBCCEEETTEEECHH-HHHHHHH
T ss_pred CcCccCCCcCcccccCCccchh-HhHHhhh
Confidence 46888876655543 4666887 8887754
No 231
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.88 E-value=24 Score=16.52 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=12.1
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~f~~ 24 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKR 24 (46)
T ss_dssp CCSCCSEECSSSCCEESS
T ss_pred CCCCCCeECcccCchhCC
Confidence 344567888888876543
No 232
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=35.77 E-value=14 Score=26.60 Aligned_cols=14 Identities=29% Similarity=0.747 Sum_probs=10.6
Q ss_pred CCceEEeccccccee
Q psy1385 53 NDQAILCESGCNFWY 67 (69)
Q Consensus 53 ~ddAI~CE~~C~~WF 67 (69)
+||-|.||. |+.+|
T Consensus 27 ~~d~~~Ce~-C~~~~ 40 (237)
T 3ray_A 27 QVDFWFCES-CQEYF 40 (237)
T ss_dssp --CCEEETT-TTEEE
T ss_pred CCCEEEchH-hCccc
Confidence 466789999 99987
No 233
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.77 E-value=7.7 Score=24.63 Aligned_cols=29 Identities=24% Similarity=0.552 Sum_probs=0.0
Q ss_pred ccccccccccccC-------------CceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDN-------------DQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~-------------ddAI~CE~~C~~WFHR 69 (69)
-.|.||..++.+. ++...--..|.--||+
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~ 90 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHF 90 (117)
T ss_dssp ------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcH
Confidence 4799999999872 2222222368888885
No 234
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=35.75 E-value=25 Score=15.45 Aligned_cols=18 Identities=11% Similarity=0.390 Sum_probs=12.3
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 6 h~~~k~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 6 STGIKPFQCPDCDRSFSR 23 (37)
T ss_dssp TCCSSSBCCTTTCCCBSS
T ss_pred CCCCCCccCCCCCcccCc
Confidence 344557899999876543
No 235
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=35.65 E-value=14 Score=17.45 Aligned_cols=17 Identities=24% Similarity=0.518 Sum_probs=11.7
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~F~~ 24 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQ 24 (46)
T ss_dssp SSSCSCBCSSSCCBCSC
T ss_pred CCCCceECCCCCchhCC
Confidence 34556889999876543
No 236
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=35.61 E-value=12 Score=19.18 Aligned_cols=30 Identities=17% Similarity=0.494 Sum_probs=18.6
Q ss_pred CCccccccccccccC---CceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDN---DQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~---ddAI~CE~~C~~WFHR 69 (69)
..+.|.+|.+++.+. ++.+. ...|.--||+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~-~~~CgH~fc~ 34 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIV-STECGHVFCS 34 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEE-EETTSCEEEH
T ss_pred CCCCCCccChhhhCccccCCCEE-eCCCCCchhH
Confidence 357899999988763 22222 2347666663
No 237
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=35.42 E-value=5.9 Score=25.05 Aligned_cols=31 Identities=35% Similarity=0.848 Sum_probs=21.9
Q ss_pred CCCccccccccccccCC-ceEEecccccceeeC
Q psy1385 38 PPIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
++.-.|-+|+..-+..+ .++-|++ |...|-|
T Consensus 5 ~~~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 36 (105)
T 1r4i_A 5 PPQKTCLICGDEASGAHYGALTCGS-CKVFFKR 36 (105)
T ss_dssp -CCCBCSSSCSBEEEEETTEEEEHH-HHHHHHH
T ss_pred CCCCCCcEeCCCCCceEeCCcchhh-hhhhhce
Confidence 44568999997766543 5777887 9887754
No 238
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.17 E-value=15 Score=17.13 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=11.4
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~~~~~C~~C~k~F~ 23 (46)
T 2eoe_A 7 GTGEKPYKCNECGKVFT 23 (46)
T ss_dssp CCCCCSSEETTTTEECS
T ss_pred CCCCCCeECCCcChhhC
Confidence 34455688888887543
No 239
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=34.99 E-value=49 Score=19.79 Aligned_cols=32 Identities=25% Similarity=0.578 Sum_probs=23.0
Q ss_pred CCCCCCccccccccccccCCceEEecc-cccceee
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCES-GCNFWYH 68 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~-~C~~WFH 68 (69)
+++.-...|-+|.+. ..---|.|.. .|.++||
T Consensus 12 p~~R~~l~C~iC~~~--~~GAciqC~~~~C~~~fH 44 (87)
T 2lq6_A 12 PPARWKLTCYLCKQK--GVGASIQCHKANCYTAFH 44 (87)
T ss_dssp CCCCCCCCBTTTTBC--CSSCEEECSCTTTCCEEE
T ss_pred ChHHhcCCCcCCCCC--CCcEeEecCCCCCCCcCc
Confidence 345556789999642 1235699985 8999999
No 240
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.85 E-value=9.9 Score=17.86 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 7 GTGEKPYKCNECGKAFSQ 24 (46)
T ss_dssp CSSCCTTCCTTTCCCCSS
T ss_pred CCCCcCcCCCCCCCccCC
Confidence 344567999999986543
No 241
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.83 E-value=32 Score=17.10 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=21.4
Q ss_pred CCCCCCCCccccccccccccC-----CceEEeccccccee
Q psy1385 33 QNPNAPPIYPCGICHKEVHDN-----DQAILCESGCNFWY 67 (69)
Q Consensus 33 q~~~s~~~ypCG~C~~eV~D~-----ddAI~CE~~C~~WF 67 (69)
........|.|..|.+..... +....|+. |.+.|
T Consensus 11 ~~h~~~~~~~C~~C~k~f~~~~~l~~~~~~~C~~-C~~~f 49 (73)
T 2ctu_A 11 KIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEK-CRKDS 49 (73)
T ss_dssp CCCCCCSEEECSSSCCEEECCCCCCCSSSCCCHH-HHHTC
T ss_pred HHhCCCCCeeCCcccchhCCHHHhCcCCCCCCCC-CChhh
Confidence 344556679999999876553 34455655 55544
No 242
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.68 E-value=16 Score=17.25 Aligned_cols=17 Identities=18% Similarity=0.567 Sum_probs=11.9
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2en9_A 7 GAGKKLFKCNECKKTFT 23 (46)
T ss_dssp CCSSCCCBCTTTCCBCS
T ss_pred CCCCCCEECCccCcccC
Confidence 34456789999987644
No 243
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.48 E-value=13 Score=17.20 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=11.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~k~~~C~~C~k~f~~ 24 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRS 24 (44)
T ss_dssp SSSSSSCCTTTCCCCSS
T ss_pred CCCcCeECCCCCCccCC
Confidence 34556899999886543
No 244
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.14 E-value=26 Score=16.31 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=12.3
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~~~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 7 GTGEKPYKCDVCHKSFRY 24 (46)
T ss_dssp STTCCSEECSSSCCEESS
T ss_pred CCCCCCeeCcccCcccCC
Confidence 445567889999876543
No 245
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.08 E-value=45 Score=17.73 Aligned_cols=41 Identities=12% Similarity=0.350 Sum_probs=23.2
Q ss_pred eeccCCCceeeCCCCCCCCCCccccccccccccC-----CceEEecc
Q psy1385 20 KIYPENQAMVFNPQNPNAPPIYPCGICHKEVHDN-----DQAILCES 61 (69)
Q Consensus 20 ~~~p~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~-----ddAI~CE~ 61 (69)
.|++.++-+...- ..--..-|.|-.|++.+.+. |+.+.|+.
T Consensus 14 ~I~~~~~~~~a~~-~~~H~~CF~C~~C~~~L~~~~~~~~~~~~yC~~ 59 (72)
T 1x61_A 14 DVVGDGAGVVALD-RVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEG 59 (72)
T ss_dssp CCCSSSCCEECSS-SEECTTTCBCSSSCCBCTTSCEEESSSCEEEHH
T ss_pred ccCCCceEEEECC-CeEcccCCcccccCCcCCcCcCEeeCCeEECHH
Confidence 4555444433322 22234568888888877542 56677765
No 246
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.96 E-value=31 Score=14.93 Aligned_cols=17 Identities=18% Similarity=0.481 Sum_probs=12.2
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 5 ~~~~~~~C~~C~k~f~~ 21 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKS 21 (36)
T ss_dssp CCCSSCBCTTTCCBCSS
T ss_pred CCCCCeecCcCCCCcCc
Confidence 34557999999887644
No 247
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=33.80 E-value=10 Score=23.94 Aligned_cols=13 Identities=23% Similarity=0.741 Sum_probs=10.9
Q ss_pred ceEEecccccceee
Q psy1385 55 QAILCESGCNFWYH 68 (69)
Q Consensus 55 dAI~CE~~C~~WFH 68 (69)
..|.|.+ |..||.
T Consensus 132 ~~v~C~s-CSl~~~ 144 (155)
T 2l6l_A 132 SLISCDT-CSLIIE 144 (155)
T ss_dssp CEEECSS-SSCEEE
T ss_pred CEEECCC-CceEEE
Confidence 5789988 999983
No 248
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.75 E-value=14 Score=17.38 Aligned_cols=17 Identities=24% Similarity=0.585 Sum_probs=12.0
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 8 ~~~~~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCG 24 (46)
T ss_dssp SSSCSCCCSSSCCCCSS
T ss_pred CCCCCcCCCcCCchhCC
Confidence 34557899999876543
No 249
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=33.50 E-value=30 Score=19.07 Aligned_cols=25 Identities=24% Similarity=0.727 Sum_probs=21.3
Q ss_pred ccccccccccccCCceEEecccccceeeC
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
--|..|.+.|. +.+.|+. |..=+|+
T Consensus 15 t~C~~C~k~i~---~G~kC~~-Ck~~cH~ 39 (49)
T 1kbe_A 15 QVCNVCQKSMI---FGVKCKH-CRLKCHN 39 (49)
T ss_dssp CCCSSSCCSSC---CEEEETT-TTEEESS
T ss_pred cCccccCceeE---CcCCCCC-CCCccch
Confidence 46999999997 5799988 9988885
No 250
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=33.48 E-value=36 Score=18.33 Aligned_cols=27 Identities=22% Similarity=0.418 Sum_probs=17.4
Q ss_pred CCCCccccccccccccCCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.+..+.|.+|.+...| -.+. .|.-.|+
T Consensus 5 ~~~~~~C~IC~~~~~~--Pv~~---~CgH~fc 31 (78)
T 1t1h_A 5 FPEYFRCPISLELMKD--PVIV---STGQTYE 31 (78)
T ss_dssp CSSSSSCTTTSCCCSS--EEEE---TTTEEEE
T ss_pred CcccCCCCCccccccC--CEEc---CCCCeec
Confidence 4567899999887765 2222 4665555
No 251
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.47 E-value=16 Score=17.21 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2yth_A 7 GSGEKPFQCEECGKRFTQ 24 (46)
T ss_dssp CCCSSSBCCSSSCCCBSS
T ss_pred CCCCcCCCCCCCCcccCC
Confidence 344567999999876543
No 252
>1lo1_A Steroid hormone receptor ERR2; estrogen related receptor 2, DNA binding domain, HERR2, hormone nuclear receptor; NMR {Homo sapiens} SCOP: g.39.1.2
Probab=33.35 E-value=5.5 Score=24.88 Aligned_cols=30 Identities=23% Similarity=0.575 Sum_probs=21.1
Q ss_pred CCccccccccccccC-CceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDN-DQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~-ddAI~CE~~C~~WFHR 69 (69)
+.-.|-+|+..-+.. =.++-|++ |...|-|
T Consensus 3 ~~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 33 (98)
T 1lo1_A 3 PKRLCLVCGDIASGYHYGVASCEA-CKAFFKR 33 (98)
T ss_dssp CCCEETTTTEECSEESSSSEECHH-HHHHHHH
T ss_pred CCCCCcEeCCCCcCeeeCccchhh-hhhhhee
Confidence 456799998766554 35777887 9887754
No 253
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=33.34 E-value=15 Score=19.23 Aligned_cols=28 Identities=25% Similarity=0.717 Sum_probs=18.3
Q ss_pred CCCCCCccccccccccccCCceEEecccccc
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESGCNF 65 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~ 65 (69)
+++++...|..|. |...-+++.|.+ |+.
T Consensus 2 ~~~~g~W~C~~C~--~~N~~~~~kC~a-C~t 29 (33)
T 3gj3_B 2 PLGSGTWDCDTCL--VQNKPEAVKCVA-CET 29 (33)
T ss_dssp ----CCEECTTTC--CEECTTCSBCTT-TCC
T ss_pred CCCCCceeCCccc--CCCccccCEEcc-cCC
Confidence 3466778888886 556668888888 864
No 254
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=33.26 E-value=37 Score=18.30 Aligned_cols=20 Identities=15% Similarity=0.481 Sum_probs=15.2
Q ss_pred ccccccccccc---CCceEEecc
Q psy1385 42 PCGICHKEVHD---NDQAILCES 61 (69)
Q Consensus 42 pCG~C~~eV~D---~ddAI~CE~ 61 (69)
.|..|++.|.+ +++.|.-..
T Consensus 17 ~C~~C~~~I~~~g~~~~~~~a~~ 39 (77)
T 2egq_A 17 KCAGCKNPITGFGKGSSVVAYEG 39 (77)
T ss_dssp CCSSSCCCCCCCSSCCCEEEETT
T ss_pred cCcccCCcccCCCCCceeEEECc
Confidence 59999999997 666665543
No 255
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron transfer, Fe reduction, GEO sulfurreducens; HET: HEM; 3.20A {Geobacter sulfurreducens}
Probab=33.17 E-value=16 Score=26.15 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=19.7
Q ss_pred CCceeeCCCCCCCCCCcccccccccccc
Q psy1385 25 NQAMVFNPQNPNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 25 ~~p~~fn~q~~~s~~~ypCG~C~~eV~D 52 (69)
.||++|+=+......-..|-.||..+.+
T Consensus 13 ~~~v~F~H~~H~~~~~~~C~~CH~~~~~ 40 (318)
T 3ov0_A 13 AAPVIFSHDIHLKKYNNNCRICHIALFD 40 (318)
T ss_dssp SCCEEECTTTTTTTTTSCCHHHHHTTSC
T ss_pred CCceEEcchhhHHhhcCCceehhhhhhc
Confidence 3899998887766555567777766654
No 256
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.16 E-value=16 Score=17.04 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=12.0
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (47)
T 2epx_A 7 GTGKKPYECIECGKAFI 23 (47)
T ss_dssp CCCCCSBCCSSSCCCBS
T ss_pred cCCCCCEECCccCchhC
Confidence 34556799999987644
No 257
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=33.15 E-value=57 Score=17.65 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=19.3
Q ss_pred CCCCCCccccccccccccCCceEEeccc-ccceeeC
Q psy1385 35 PNAPPIYPCGICHKEVHDNDQAILCESG-CNFWYHR 69 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ddAI~CE~~-C~~WFHR 69 (69)
......+.|.||...+.| .+. .. |.-.||+
T Consensus 10 ~~~~~~~~C~IC~~~~~~---p~~--~~~CgH~fC~ 40 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTD---AVV--IPCCGNSYCD 40 (74)
T ss_dssp CCSCGGGSCSSSCCCCTT---CEE--CSSSCCEECT
T ss_pred ccCCCCCCCcCCChHHhC---CeE--cCCCCCHHHH
Confidence 344567899999887765 333 33 6666654
No 258
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=32.82 E-value=21 Score=19.74 Aligned_cols=25 Identities=40% Similarity=0.817 Sum_probs=20.9
Q ss_pred ccccccccccccCCceEEecccccceee
Q psy1385 41 YPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
--|..|++.+ -.++..|+. |.+=.|
T Consensus 23 t~C~~C~~~i--~kqg~kC~~-C~~~cH 47 (59)
T 1rfh_A 23 GWCDLCGREV--LRQALRCAN-CKFTCH 47 (59)
T ss_dssp EECTTTCSEE--CSCCEECTT-TSCEEC
T ss_pred eEchhcchhh--hhCccEeCC-CCCeEe
Confidence 4599999999 679999998 887666
No 259
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.80 E-value=28 Score=16.24 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=12.1
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYT 24 (46)
T ss_dssp CCCCCSEECSSSCCEESS
T ss_pred CCCCCCcCCCCCCCcCCC
Confidence 344557889999876543
No 260
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.62 E-value=16 Score=17.03 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~~~~~C~~C~k~f~~ 24 (44)
T 2eou_A 7 GAAKTTSECQECGKIFRH 24 (44)
T ss_dssp CSSSCCCCCTTTCCCCSS
T ss_pred CCCCcCeECCCCCcccCC
Confidence 344567889999876543
No 261
>2cy3_A Cytochrome C3; electron transport (heme protein); HET: HEM; 1.70A {Desulfomicrobium norvegicum} SCOP: a.138.1.1 PDB: 1w7o_A*
Probab=32.23 E-value=14 Score=23.31 Aligned_cols=41 Identities=17% Similarity=0.425 Sum_probs=27.0
Q ss_pred eccCCCceeeCCCCCCCCCCccccccccccccC-CceEEecc-ccc
Q psy1385 21 IYPENQAMVFNPQNPNAPPIYPCGICHKEVHDN-DQAILCES-GCN 64 (69)
Q Consensus 21 ~~p~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~-ddAI~CE~-~C~ 64 (69)
+....+|..|+=+... ..-|..||..+... .+-.-|.. +|+
T Consensus 25 ~~~~~~pV~F~H~~H~---~~dC~~CHh~~~~~~~~~~~C~~~~CH 67 (118)
T 2cy3_A 25 PGALQKTVPFPHTKHA---TVECVQCHHTLEADGGAVKKCTTSGCH 67 (118)
T ss_dssp CCCCCCBEECCGGGGT---TSCHHHHSTTTTTTTTCCCCTTSTTSS
T ss_pred ccCccCCcccCHHHHC---cCChhhcCCCCCCCCCccccccccccc
Confidence 3456689999877775 35799999988554 33344543 464
No 262
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=32.07 E-value=30 Score=24.32 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=24.5
Q ss_pred CCccccccccccc-cCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVH-DNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~-D~ddAI~CE~~C~~WFHR 69 (69)
..--|..|++.+. =-.+...|.. |...+|+
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~-C~~~~h~ 386 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYR-CRAPAHK 386 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETT-TCCEECG
T ss_pred CCCCCccccchhceeCCCCCCCCC-CcCccch
Confidence 3457999999885 3578999998 9999995
No 263
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=32.04 E-value=37 Score=17.71 Aligned_cols=21 Identities=10% Similarity=0.313 Sum_probs=16.0
Q ss_pred ccccccccccccCCceEEecc
Q psy1385 41 YPCGICHKEVHDNDQAILCES 61 (69)
Q Consensus 41 ypCG~C~~eV~D~ddAI~CE~ 61 (69)
-.|..|++.|...+..|.-..
T Consensus 12 ~~C~~C~~~i~~~e~~~~~~~ 32 (72)
T 3f6q_B 12 ATCERCKGGFAPAEKIVNSNG 32 (72)
T ss_dssp CBCTTTCCBCCTTCEEEEETT
T ss_pred ccchhcCccccCCceEEEeCc
Confidence 379999999998777665443
No 264
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=31.84 E-value=17 Score=14.77 Aligned_cols=12 Identities=33% Similarity=1.212 Sum_probs=8.8
Q ss_pred cccccccccccc
Q psy1385 41 YPCGICHKEVHD 52 (69)
Q Consensus 41 ypCG~C~~eV~D 52 (69)
|.|..|.+....
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 788888876543
No 265
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.62 E-value=29 Score=15.06 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=10.8
Q ss_pred CCCCCccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVH 51 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~ 51 (69)
.....|.|..|.+...
T Consensus 5 ~~~k~~~C~~C~k~f~ 20 (36)
T 2elt_A 5 SSGKPYKCPQCSYASA 20 (36)
T ss_dssp CCCCSEECSSSSCEES
T ss_pred CCCCCCCCCCCCcccC
Confidence 3445688888887654
No 266
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=31.56 E-value=55 Score=16.56 Aligned_cols=33 Identities=21% Similarity=0.527 Sum_probs=23.7
Q ss_pred CCCCCccccc--ccccc------------ccCCceEEec-ccccceee
Q psy1385 36 NAPPIYPCGI--CHKEV------------HDNDQAILCE-SGCNFWYH 68 (69)
Q Consensus 36 ~s~~~ypCG~--C~~eV------------~D~ddAI~CE-~~C~~WFH 68 (69)
.....|.|-. |.+.. +..+....|+ ..|.+.|-
T Consensus 13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~ 60 (72)
T 2epa_A 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA 60 (72)
T ss_dssp CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEES
T ss_pred cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccC
Confidence 3445789988 98754 3357788997 36998884
No 267
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.86 E-value=69 Score=17.50 Aligned_cols=13 Identities=15% Similarity=0.447 Sum_probs=6.9
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.-.|..|++.|.+
T Consensus 15 ~~~C~~C~~~I~~ 27 (79)
T 1x62_A 15 LPMCDKCGTGIVG 27 (79)
T ss_dssp CCCCSSSCCCCCS
T ss_pred CCccccCCCCccC
Confidence 3455555555554
No 268
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.80 E-value=45 Score=18.17 Aligned_cols=20 Identities=25% Similarity=0.494 Sum_probs=15.6
Q ss_pred cccccccccccCCceEEecc
Q psy1385 42 PCGICHKEVHDNDQAILCES 61 (69)
Q Consensus 42 pCG~C~~eV~D~ddAI~CE~ 61 (69)
.|..|++.|.+.+..|.-..
T Consensus 17 ~C~~C~~~I~~~~~~~~a~~ 36 (82)
T 1x63_A 17 KCKGCFKAIVAGDQNVEYKG 36 (82)
T ss_dssp BCSSSCCBCCSSSCEEECSS
T ss_pred cCccCCcccccCceEEEECc
Confidence 79999999998777765443
No 269
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=30.62 E-value=29 Score=14.87 Aligned_cols=15 Identities=27% Similarity=0.660 Sum_probs=10.4
Q ss_pred CCCcccccccccccc
Q psy1385 38 PPIYPCGICHKEVHD 52 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D 52 (69)
...|.|..|.+....
T Consensus 5 ~k~~~C~~C~k~f~~ 19 (35)
T 2elx_A 5 SSGYVCALCLKKFVS 19 (35)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeECCCCcchhCC
Confidence 446888888876543
No 270
>1czj_A Cytochrome C3; octaheme cytochrome, electron transport; HET: HEM; 2.16A {Desulfomicrobium norvegicum} SCOP: a.138.1.1 PDB: 1aqe_A*
Probab=30.46 E-value=8.1 Score=24.27 Aligned_cols=39 Identities=28% Similarity=0.618 Sum_probs=27.2
Q ss_pred cCCCceeeCCCCCCCCCCccccccccccccCCceEEecc-ccc
Q psy1385 23 PENQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCES-GCN 64 (69)
Q Consensus 23 p~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~-~C~ 64 (69)
...+|.+|+=+.... +.|..||..+....+..-|-+ +|+
T Consensus 21 ~~~~~V~FsH~~H~~---~~C~~CHh~~~~~~~~~~C~~~~CH 60 (111)
T 1czj_A 21 PKKGDVTFNHASHMD---IACQQCHHTVPDTYTIESCMTEGCH 60 (111)
T ss_dssp CSSCCEEEESGGGTT---SCHHHHSTTHHHHSSCCCTTCTTSS
T ss_pred CcCCCccCChHHHCc---CCccccCCCCCCCCccccccCcccc
Confidence 467899999988876 589999988733333445641 465
No 271
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.38 E-value=63 Score=17.58 Aligned_cols=27 Identities=15% Similarity=0.631 Sum_probs=18.3
Q ss_pred CCCCccccccccccccCCceEEecccccceee
Q psy1385 37 APPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
....+.|.+|...+.| .+. ..|.-.||
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~--~~CgH~fC 38 (81)
T 2csy_A 12 EEIPFRCFICRQAFQN---PVV--TKCRHYFC 38 (81)
T ss_dssp CCCCSBCSSSCSBCCS---EEE--CTTSCEEE
T ss_pred CCCCCCCcCCCchhcC---eeE--ccCCCHhH
Confidence 3457899999988855 332 35766665
No 272
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=30.32 E-value=6.5 Score=19.04 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=9.5
Q ss_pred CCCCCCcccccccccc
Q psy1385 35 PNAPPIYPCGICHKEV 50 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV 50 (69)
......|.|..|.+..
T Consensus 7 ~~~~k~~~C~~C~k~f 22 (48)
T 2epr_A 7 GRTRKQVACEICGKIF 22 (48)
T ss_dssp CCCCCSEEETTTTEEE
T ss_pred CCCCcCeeCCCCCccc
Confidence 3444567777776543
No 273
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.28 E-value=52 Score=17.51 Aligned_cols=25 Identities=20% Similarity=0.521 Sum_probs=17.3
Q ss_pred CCCCcccccccccccc-----CCceEEecc
Q psy1385 37 APPIYPCGICHKEVHD-----NDQAILCES 61 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D-----~ddAI~CE~ 61 (69)
-..-|.|-.|++.+.+ .|+.|.|+.
T Consensus 32 H~~CF~C~~C~~~L~~~~f~~~~g~~yC~~ 61 (72)
T 1x4l_A 32 HNDCFNCKKCSLSLVGRGFLTERDDILCPD 61 (72)
T ss_dssp CTTTCBCSSSCCBCTTSCCEECSSSEECHH
T ss_pred CcccCEeccCCCcCCCCccEeECCEEEChh
Confidence 4566888888887765 366677764
No 274
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.23 E-value=26 Score=15.39 Aligned_cols=17 Identities=24% Similarity=0.722 Sum_probs=10.9
Q ss_pred CCCCCcccccccccccc
Q psy1385 36 NAPPIYPCGICHKEVHD 52 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D 52 (69)
.....|.|..|.+....
T Consensus 5 ~~~k~~~C~~C~k~f~~ 21 (37)
T 2elo_A 5 SSGRSYSCPVCEKSFSE 21 (37)
T ss_dssp CCCCCCEETTTTEECSS
T ss_pred CCCCCcCCCCCCCccCC
Confidence 34456888888776543
No 275
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.13 E-value=46 Score=17.50 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=17.8
Q ss_pred CCCCCccccccccccccCCceEEecccccceee
Q psy1385 36 NAPPIYPCGICHKEVHDNDQAILCESGCNFWYH 68 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D~ddAI~CE~~C~~WFH 68 (69)
.....+.|.||..+..+ .+ ..|.--||
T Consensus 11 ~~~~~~~C~IC~~~~~~---~~---~~CgH~fc 37 (70)
T 2ecn_A 11 QLTDEEECCICMDGRAD---LI---LPCAHSFC 37 (70)
T ss_dssp CCCCCCCCSSSCCSCCS---EE---ETTTEEEC
T ss_pred cCCCCCCCeeCCcCccC---cc---cCCCCccc
Confidence 44567899999988766 22 24655555
No 276
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=29.98 E-value=16 Score=20.26 Aligned_cols=11 Identities=36% Similarity=0.803 Sum_probs=7.9
Q ss_pred CCccccccccc
Q psy1385 39 PIYPCGICHKE 49 (69)
Q Consensus 39 ~~ypCG~C~~e 49 (69)
..-.|-||..+
T Consensus 5 ~~~~CrIC~~~ 15 (60)
T 1vyx_A 5 DVPVCWICNEE 15 (60)
T ss_dssp SCCEETTTTEE
T ss_pred CCCEeEEeecC
Confidence 34568899876
No 277
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.59 E-value=16 Score=17.15 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 H~~~k~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 7 GTGGKPYQCNECGKAFSQ 24 (46)
T ss_dssp SSSSCSSSCCSSCCCCSS
T ss_pred cCCCCCeECCCCCcccCC
Confidence 344567999999986543
No 278
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.31 E-value=35 Score=15.42 Aligned_cols=18 Identities=22% Similarity=0.630 Sum_probs=11.7
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 5 h~~~k~~~C~~C~k~f~~ 22 (41)
T 2ept_A 5 SSGQRVYECQECGKSFRQ 22 (41)
T ss_dssp CCCCCCEECSSSCCEESS
T ss_pred cCCCCCeECCCCCCCcCC
Confidence 344556888888776543
No 279
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=29.22 E-value=9.5 Score=24.46 Aligned_cols=30 Identities=23% Similarity=0.595 Sum_probs=21.6
Q ss_pred CCccccccccccccCC-ceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
..-.|-+|+...+-.+ .++-|++ |..+|-|
T Consensus 7 ~~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 37 (119)
T 2han_B 7 QEELCLVCGDRASGYHYNALTCEG-CKGFFRR 37 (119)
T ss_dssp CSCBCTTTCSBCCEEETTEEECHH-HHHHHHH
T ss_pred CCCcCeEeCCcCCcceECchhHHh-hHHhhhh
Confidence 3467999997765543 4777887 9888754
No 280
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.20 E-value=25 Score=15.81 Aligned_cols=15 Identities=27% Similarity=0.629 Sum_probs=9.8
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
..-.|.|..|.+...
T Consensus 6 ~~k~~~C~~C~k~f~ 20 (37)
T 2elm_A 6 SGHLYYCSQCHYSSI 20 (37)
T ss_dssp SSCEEECSSSSCEEE
T ss_pred CCcCeECCCCCcccC
Confidence 344578888877654
No 281
>3gxe_F Collagen alpha-1(I) chain; protein-peptide complex, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3gxe_E*
Probab=29.19 E-value=22 Score=17.53 Aligned_cols=12 Identities=25% Similarity=0.465 Sum_probs=7.4
Q ss_pred CCCCCCCCCccc
Q psy1385 3 PGGPGFPNTKPM 14 (69)
Q Consensus 3 ~~~~~~~~~~~~ 14 (69)
||-||.+|.|--
T Consensus 3 pG~pG~pG~KG~ 14 (23)
T 3gxe_F 3 XGTAGLXGMKGH 14 (26)
T ss_pred CCCCCCCCCCCC
Confidence 566677666643
No 282
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.05 E-value=25 Score=18.76 Aligned_cols=24 Identities=25% Similarity=0.718 Sum_probs=18.3
Q ss_pred CCCccccccccccccC-----CceEEecc
Q psy1385 38 PPIYPCGICHKEVHDN-----DQAILCES 61 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~-----ddAI~CE~ 61 (69)
+.-|.|-.|++.+.+. |..+.|+.
T Consensus 29 ~~CF~C~~C~~~L~~~~f~~~~g~~yC~~ 57 (70)
T 2d8x_A 29 PECFRCDLCQEVLADIGFVKNAGRHLCRP 57 (70)
T ss_dssp TTTSBCSSSCCBCSSSCCEEETTEEECHH
T ss_pred ccCCEeCCCCCcCCCCccEeECCeEECHH
Confidence 4568899999887773 67788875
No 283
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.42 E-value=43 Score=18.33 Aligned_cols=25 Identities=24% Similarity=0.721 Sum_probs=19.2
Q ss_pred CCCCccccccccccccC-----CceEEecc
Q psy1385 37 APPIYPCGICHKEVHDN-----DQAILCES 61 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~-----ddAI~CE~ 61 (69)
-..-|.|-.|++.+.+. |..|.|+.
T Consensus 40 H~~CF~C~~C~~~L~~~~f~~~~~~~~C~~ 69 (82)
T 2ehe_A 40 HEGCFRCCRCQRSLADEPFTCQDSELLCND 69 (82)
T ss_dssp BTTTSBCTTTCCBCSSCCEEEETTEEEETT
T ss_pred cccCCeecCCCCccCCCccEeeCCEEECHH
Confidence 34578999999988763 67888876
No 284
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.28 E-value=35 Score=14.91 Aligned_cols=15 Identities=27% Similarity=0.837 Sum_probs=10.2
Q ss_pred CCCCccccccccccc
Q psy1385 37 APPIYPCGICHKEVH 51 (69)
Q Consensus 37 s~~~ypCG~C~~eV~ 51 (69)
....|.|..|.+...
T Consensus 6 ~~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 6 SGLLYDCHICERKFK 20 (36)
T ss_dssp CCCCEECSSSCCEES
T ss_pred CCCCeECCCCCCccC
Confidence 345688888877544
No 285
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=28.11 E-value=22 Score=14.47 Aligned_cols=13 Identities=15% Similarity=0.723 Sum_probs=9.1
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|.+....
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 1ard_A 2 SFVCEVCTRAFAR 14 (29)
T ss_dssp CCBCTTTCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 4788888876543
No 286
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.96 E-value=18 Score=17.08 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=12.7
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 7 GTGEKPYKCMECGKAFGD 24 (46)
T ss_dssp CSSCCSSSBTTTTBCCSS
T ss_pred CCCCCCcCCCCCCchhCC
Confidence 344567999999987544
No 287
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=27.63 E-value=54 Score=17.18 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=10.3
Q ss_pred Ccccccccc--cccc-CCceEEecc
Q psy1385 40 IYPCGICHK--EVHD-NDQAILCES 61 (69)
Q Consensus 40 ~ypCG~C~~--eV~D-~ddAI~CE~ 61 (69)
.+.|..|.. .+.| ....+.|..
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~ 29 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAK 29 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESS
T ss_pred cEeCcCCCCcceEEcCCCCeEECcc
Confidence 445666654 2223 224455555
No 288
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=27.40 E-value=67 Score=16.20 Aligned_cols=31 Identities=16% Similarity=0.483 Sum_probs=22.0
Q ss_pred CCCCcccc--ccccccc------------cCCceEEecccccceee
Q psy1385 37 APPIYPCG--ICHKEVH------------DNDQAILCESGCNFWYH 68 (69)
Q Consensus 37 s~~~ypCG--~C~~eV~------------D~ddAI~CE~~C~~WFH 68 (69)
....|.|. .|.+... ..+....|+. |.+.|-
T Consensus 16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f~ 60 (73)
T 1f2i_G 16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI-CMRNFS 60 (73)
T ss_dssp CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT-TCCEES
T ss_pred CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC-CCchhC
Confidence 34569996 5987643 3467788998 988874
No 289
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=27.29 E-value=30 Score=14.98 Aligned_cols=15 Identities=20% Similarity=0.516 Sum_probs=10.4
Q ss_pred CCCcccccccccccc
Q psy1385 38 PPIYPCGICHKEVHD 52 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D 52 (69)
...|.|..|.+....
T Consensus 5 ~k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 5 KRPFVCRICLSAFTT 19 (35)
T ss_dssp CSCEECSSSCCEESS
T ss_pred CcCeeCCCCCcccCC
Confidence 446888888876543
No 290
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=27.17 E-value=23 Score=14.59 Aligned_cols=13 Identities=31% Similarity=1.104 Sum_probs=9.4
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|.+....
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1paa_A 2 AYACGLCNRAFTR 14 (30)
T ss_dssp CSBCTTTCCBCSS
T ss_pred CcCCcccCcccCC
Confidence 4789999876544
No 291
>1cit_A NGFI-B, protein (orphan nuclear receptor NGFI-B); early immediate response gene product, transcription factor, monomeric protein-DNA complex; HET: DNA; 2.70A {Rattus norvegicus} SCOP: g.39.1.2
Probab=27.11 E-value=7.6 Score=23.78 Aligned_cols=27 Identities=22% Similarity=0.646 Sum_probs=17.9
Q ss_pred cccccccccccC-CceEEecccccceeeC
Q psy1385 42 PCGICHKEVHDN-DQAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~-ddAI~CE~~C~~WFHR 69 (69)
+|-+|+..-+.. =.++-||+ |..+|-|
T Consensus 2 ~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 29 (89)
T 1cit_A 2 RCAVCGDNASCQHYGVRTCEG-CKGFFKR 29 (89)
T ss_dssp CCSSSCCCCCEEETTEEECHH-HHHHHHH
T ss_pred CCeEeCCCCcceEeCccchhh-hhhhcee
Confidence 477787655443 35777887 8887744
No 292
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.89 E-value=45 Score=15.58 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=12.5
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~F~~ 24 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQ 24 (46)
T ss_dssp CCCCSSCCCSSSCCCCSS
T ss_pred CCCCCCcCCCCCCCeeCC
Confidence 344567999999876543
No 293
>1rwj_A Cytochrome C family protein; multiheme cytochrome C, geobacter metallireducens, heme coordination in C-type cytochromes; HET: HEM; 1.70A {Geobacter sulfurreducens} SCOP: a.138.1.1
Probab=26.69 E-value=4 Score=24.46 Aligned_cols=24 Identities=21% Similarity=0.461 Sum_probs=16.8
Q ss_pred CCceeeCCCCCCCCCCcccccccccc
Q psy1385 25 NQAMVFNPQNPNAPPIYPCGICHKEV 50 (69)
Q Consensus 25 ~~p~~fn~q~~~s~~~ypCG~C~~eV 50 (69)
..+.+|+=...... |.|..||..+
T Consensus 16 ~g~V~F~H~~H~~~--~~C~~CH~~~ 39 (82)
T 1rwj_A 16 VADAAFSHEFHLGM--YKCNECHTKL 39 (82)
T ss_dssp SCCEEEEHHHHTTT--CCGGGTBTTT
T ss_pred CCceEcChHHHCCC--CChhhccccc
Confidence 44677775555543 6899999887
No 294
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=26.68 E-value=28 Score=25.35 Aligned_cols=24 Identities=29% Similarity=0.721 Sum_probs=18.7
Q ss_pred cccc--cccccccC-CceEEecccccce
Q psy1385 42 PCGI--CHKEVHDN-DQAILCESGCNFW 66 (69)
Q Consensus 42 pCG~--C~~eV~D~-ddAI~CE~~C~~W 66 (69)
-|.. |.+-|.++ +..-.||. |+.-
T Consensus 310 aC~~~~C~kkv~~~~~g~~~C~~-C~~~ 336 (444)
T 4gop_C 310 ACASEGCNKKVNLDHENNWRCEK-CDRS 336 (444)
T ss_dssp ECCSTTCCCBEEECTTSCEEETT-TTEE
T ss_pred cCCcccCCCccccCCCccEECCC-CCCc
Confidence 4777 99999875 45689998 9853
No 295
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=26.63 E-value=16 Score=24.70 Aligned_cols=23 Identities=26% Similarity=0.794 Sum_probs=13.4
Q ss_pred CCcccccccccccc------CCceEEecc
Q psy1385 39 PIYPCGICHKEVHD------NDQAILCES 61 (69)
Q Consensus 39 ~~ypCG~C~~eV~D------~ddAI~CE~ 61 (69)
..|+|-.||.|..| ...+|+|-.
T Consensus 35 k~y~Cr~CHde~~dH~l~r~~~~~vlCg~ 63 (143)
T 2dkt_A 35 KLYTCRLCHDTNEDHQLDRFKVKEVQCIN 63 (143)
T ss_dssp EEESSHHHHHHTSSSCCCSSSCCCEEESS
T ss_pred Cccchhhhhccccccccchhccceeeecc
Confidence 35667777776655 244555543
No 296
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.13 E-value=40 Score=14.79 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=10.6
Q ss_pred CCCCcccccccccccc
Q psy1385 37 APPIYPCGICHKEVHD 52 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D 52 (69)
....|.|..|.+....
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 6 SGRAMKCPYCDFYFMK 21 (37)
T ss_dssp CCCCEECSSSSCEECS
T ss_pred CCCCeECCCCChhhcc
Confidence 3456888888776543
No 297
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=26.02 E-value=27 Score=21.52 Aligned_cols=26 Identities=27% Similarity=0.897 Sum_probs=17.8
Q ss_pred Ccccccccccc-------ccCCceEEeccccccee
Q psy1385 40 IYPCGICHKEV-------HDNDQAILCESGCNFWY 67 (69)
Q Consensus 40 ~ypCG~C~~eV-------~D~ddAI~CE~~C~~WF 67 (69)
.|+|. |+... .+.+..+.|.+ |--|.
T Consensus 23 ~ypCr-CGd~F~it~edL~~ge~iv~C~s-CSL~I 55 (83)
T 1yop_A 23 TYPCP-CGDRFQIYLDDMFEGEKVAVCPS-CSLMI 55 (83)
T ss_dssp EEEET-TTEEEEEEHHHHHTTCCEEECSS-SCCEE
T ss_pred EEeCC-CCCeEEECHHHHhCCCEEEECCC-CccEE
Confidence 57886 77432 33467888887 98885
No 298
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=25.88 E-value=85 Score=17.00 Aligned_cols=14 Identities=14% Similarity=0.629 Sum_probs=5.8
Q ss_pred CceEEecc-ccccee
Q psy1385 54 DQAILCES-GCNFWY 67 (69)
Q Consensus 54 ddAI~CE~-~C~~WF 67 (69)
+....|+- .|.+.|
T Consensus 34 ~~~~~C~~~~C~~~f 48 (119)
T 2jp9_A 34 EKPYQCDFKDCERRF 48 (119)
T ss_dssp TCCEECCSTTCCCEE
T ss_pred CCCccCCCCCCcCcc
Confidence 33444541 244444
No 299
>3h4n_A Cytochrome C7, cytochrome C3; multiheme cytochrome, geobacter sulfurreducen electron transport; HET: HEM; 1.35A {Geobacter sulfurreducens} SCOP: a.138.1.1
Probab=25.78 E-value=32 Score=19.66 Aligned_cols=27 Identities=19% Similarity=0.394 Sum_probs=20.6
Q ss_pred CCceeeCCCCCCCCCCcccccccccccc
Q psy1385 25 NQAMVFNPQNPNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 25 ~~p~~fn~q~~~s~~~ypCG~C~~eV~D 52 (69)
.++.+|+=+....-.. .|..||..+.+
T Consensus 11 ~g~V~F~H~~H~~~~~-~C~~CH~~~~~ 37 (72)
T 3h4n_A 11 NGNVTFDHKKHAGVKG-ECKACHETEAG 37 (72)
T ss_dssp TCCEEECGGGGSSCTT-GGGGTSSSTTC
T ss_pred CCceEeCHHHHhhhcC-ChhhhcCCCcC
Confidence 5788898887765433 89999998874
No 300
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=25.61 E-value=23 Score=14.49 Aligned_cols=13 Identities=23% Similarity=0.590 Sum_probs=8.9
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|.+....
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 1rik_A 2 KFACPECPKRFMR 14 (29)
T ss_dssp CEECSSSSCEESC
T ss_pred CccCCCCCchhCC
Confidence 3778888876543
No 301
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.42 E-value=50 Score=17.93 Aligned_cols=20 Identities=20% Similarity=0.434 Sum_probs=14.2
Q ss_pred ccccccccccc--CCceEEecc
Q psy1385 42 PCGICHKEVHD--NDQAILCES 61 (69)
Q Consensus 42 pCG~C~~eV~D--~ddAI~CE~ 61 (69)
.|..|++.|.+ +++.|.-..
T Consensus 7 ~C~~C~~~I~~~g~~~~~~a~~ 28 (76)
T 1x68_A 7 GCVACSKPISGLTGAKFICFQD 28 (76)
T ss_dssp CCTTTCCCCCTTTTCCEEEETT
T ss_pred CCccCCCcccCCCCceeEEECC
Confidence 58888888887 666665443
No 302
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=25.11 E-value=29 Score=17.02 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=8.8
Q ss_pred CCCccccccccccc
Q psy1385 38 PPIYPCGICHKEVH 51 (69)
Q Consensus 38 ~~~ypCG~C~~eV~ 51 (69)
...|.|..|.+...
T Consensus 22 ~k~~~C~~C~k~f~ 35 (54)
T 1yui_A 22 EQPATCPICYAVIR 35 (54)
T ss_dssp SCCEECTTTCCEES
T ss_pred CCCccCCCCCcccC
Confidence 44577777776543
No 303
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=25.08 E-value=11 Score=22.74 Aligned_cols=29 Identities=21% Similarity=0.619 Sum_probs=20.3
Q ss_pred CccccccccccccCC-ceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
.-+|-+|+...+..+ .++-|++ |...|-|
T Consensus 4 ~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 33 (84)
T 1hcq_A 4 TRYCAVCNDYASGYHYGVWSCEG-CKAFFKR 33 (84)
T ss_dssp CCBCTTTCSBCCEEETTEEECHH-HHHHHHH
T ss_pred CCcCcEECCCCCCeeeCccchHH-hhhhhhh
Confidence 357899987665543 5777887 8887744
No 304
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.05 E-value=23 Score=14.32 Aligned_cols=12 Identities=25% Similarity=0.539 Sum_probs=8.5
Q ss_pred Cccccccccccc
Q psy1385 40 IYPCGICHKEVH 51 (69)
Q Consensus 40 ~ypCG~C~~eV~ 51 (69)
.|.|..|.+...
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 2m0f_A 2 PLKCRECGKQFT 13 (29)
T ss_dssp CEECTTTSCEES
T ss_pred CccCCCCCCccC
Confidence 477888887654
No 305
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=25.02 E-value=24 Score=22.72 Aligned_cols=9 Identities=33% Similarity=1.357 Sum_probs=6.9
Q ss_pred cccccceee
Q psy1385 60 ESGCNFWYH 68 (69)
Q Consensus 60 E~~C~~WFH 68 (69)
..||.+||+
T Consensus 60 ~~GCr~Wf~ 68 (99)
T 2gag_D 60 AAGCRKWFN 68 (99)
T ss_dssp TTTTCCEEE
T ss_pred CCCCccEEE
Confidence 458999985
No 306
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.94 E-value=51 Score=15.24 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=11.8
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 7 H~~~k~~~C~~C~k~F~ 23 (46)
T 2yti_A 7 GTGEKPYKCNECGKVFT 23 (46)
T ss_dssp CSCCCTTCCSSSCCCCS
T ss_pred CCCCcCeECCCCCcccC
Confidence 34456799999987643
No 307
>1ehj_A Cytochrome C7; multi-heme, electron transport; HET: HEC; NMR {Desulfuromonas acetoxidans} SCOP: a.138.1.1 PDB: 1f22_A* 1hh5_A* 1lm2_A* 1new_A* 2new_A* 1kwj_A* 1l3o_A*
Probab=24.82 E-value=11 Score=21.73 Aligned_cols=10 Identities=40% Similarity=0.999 Sum_probs=4.7
Q ss_pred cccccccccc
Q psy1385 42 PCGICHKEVH 51 (69)
Q Consensus 42 pCG~C~~eV~ 51 (69)
.|+.||++..
T Consensus 48 ~C~~CH~~~~ 57 (68)
T 1ehj_A 48 ACKTCHKSNN 57 (68)
T ss_dssp SHHHHGGGTC
T ss_pred HHHHHhccCC
Confidence 4555554444
No 308
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=24.79 E-value=32 Score=13.87 Aligned_cols=13 Identities=31% Similarity=0.736 Sum_probs=9.5
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|.+....
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1klr_A 2 TYQCQYCEFRSAD 14 (30)
T ss_dssp CCCCSSSSCCCSC
T ss_pred CccCCCCCCccCC
Confidence 4788888876654
No 309
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=30.39 E-value=16 Score=14.93 Aligned_cols=13 Identities=31% Similarity=0.626 Sum_probs=9.5
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|++....
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 4788888876654
No 310
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.35 E-value=31 Score=19.64 Aligned_cols=29 Identities=14% Similarity=0.372 Sum_probs=20.3
Q ss_pred CCCcccccccccc-cc-----------CCceEEeccccccee
Q psy1385 38 PPIYPCGICHKEV-HD-----------NDQAILCESGCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV-~D-----------~ddAI~CE~~C~~WF 67 (69)
...|.|..|.+.. .. .+....|+. |.+-|
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~-Cgk~F 72 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHH-CGKQL 72 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSS-SCCCC
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCC-CCCee
Confidence 4568999998877 32 345667877 77766
No 311
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.26 E-value=41 Score=14.66 Aligned_cols=16 Identities=13% Similarity=0.551 Sum_probs=10.7
Q ss_pred CCCCcccccccccccc
Q psy1385 37 APPIYPCGICHKEVHD 52 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D 52 (69)
....|.|..|.+....
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 6 SGKPFKCSLCEYATRS 21 (36)
T ss_dssp CCCSEECSSSSCEESC
T ss_pred CCCCccCCCCCchhCC
Confidence 3456888888776543
No 312
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=24.18 E-value=39 Score=21.15 Aligned_cols=26 Identities=27% Similarity=0.859 Sum_probs=18.0
Q ss_pred Cccccccccccc-------cCCceEEeccccccee
Q psy1385 40 IYPCGICHKEVH-------DNDQAILCESGCNFWY 67 (69)
Q Consensus 40 ~ypCG~C~~eV~-------D~ddAI~CE~~C~~WF 67 (69)
.|+|. |+.... +..+.+.|.+ |--|.
T Consensus 23 ~ypCr-CGd~F~IteedLe~ge~iv~C~s-CSL~I 55 (89)
T 2jr7_A 23 FYPCP-CGDNFSITKEDLENGEDVATCPS-CSLII 55 (89)
T ss_dssp EEECT-TSSEEEEEHHHHHHTCCEEECTT-TCCEE
T ss_pred EEcCC-CCCEEEECHHHHhCCCEEEECCC-CccEE
Confidence 57887 875432 3456888887 98875
No 313
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.14 E-value=34 Score=15.87 Aligned_cols=17 Identities=18% Similarity=0.557 Sum_probs=11.3
Q ss_pred CCCCCCccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVH 51 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~ 51 (69)
......|.|..|.+...
T Consensus 5 h~~~k~~~C~~C~k~f~ 21 (45)
T 2epq_A 5 SSGEKPYSCPVCGLRFK 21 (45)
T ss_dssp CSSCCSSEETTTTEECS
T ss_pred cCCCCCCcCCCCCcccC
Confidence 34455688888887643
No 314
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.13 E-value=44 Score=18.76 Aligned_cols=24 Identities=25% Similarity=0.552 Sum_probs=16.5
Q ss_pred CCCcccccccccccc----CCceEEecc
Q psy1385 38 PPIYPCGICHKEVHD----NDQAILCES 61 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D----~ddAI~CE~ 61 (69)
+.-|.|-.|++.+.+ .|+.+.|+.
T Consensus 40 ~~CF~C~~C~~~L~~~~~~~~g~~yC~~ 67 (80)
T 2dj7_A 40 VSCFKCQTCSVILTGEYISKDGVPYCES 67 (80)
T ss_dssp TTTCBCSSSCCBCSSCCEEETTEEECTT
T ss_pred cccCCcCcCCCCcCCCeEEECCEEECHH
Confidence 456788888877654 366777765
No 315
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.01 E-value=51 Score=15.29 Aligned_cols=18 Identities=22% Similarity=0.490 Sum_probs=12.3
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......|.|..|.+....
T Consensus 7 h~~~k~~~C~~C~k~f~~ 24 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFSG 24 (46)
T ss_dssp CSCCCTTCCSSSCCCCSS
T ss_pred CCCCCCeeCCCCCcccCC
Confidence 345567899999876543
No 316
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.92 E-value=8 Score=20.06 Aligned_cols=30 Identities=17% Similarity=0.378 Sum_probs=15.8
Q ss_pred CCCCccccc--cccccc------------cCCceEEeccccccee
Q psy1385 37 APPIYPCGI--CHKEVH------------DNDQAILCESGCNFWY 67 (69)
Q Consensus 37 s~~~ypCG~--C~~eV~------------D~ddAI~CE~~C~~WF 67 (69)
....|.|.. |.+... ..+....|+. |.+.|
T Consensus 35 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~-C~k~F 78 (79)
T 2dlk_A 35 HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF-SGPSS 78 (79)
T ss_dssp SCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS-SSCCC
T ss_pred CCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC-CCCCC
Confidence 344566666 655432 2345556665 65544
No 317
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=23.90 E-value=21 Score=22.61 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=18.7
Q ss_pred CccccccccccccCCceEEeccccc
Q psy1385 40 IYPCGICHKEVHDNDQAILCESGCN 64 (69)
Q Consensus 40 ~ypCG~C~~eV~D~ddAI~CE~~C~ 64 (69)
.|.|-.|+++.........|.. |.
T Consensus 132 ~y~C~~Cg~~~~~~~~~~~Cp~-CG 155 (165)
T 2lcq_A 132 RYVCIGCGRKFSTLPPGGVCPD-CG 155 (165)
T ss_dssp CEEESSSCCEESSCCGGGBCTT-TC
T ss_pred EEECCCCCCcccCCCCCCcCCC-CC
Confidence 6899999988876655668887 75
No 318
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=23.52 E-value=63 Score=16.36 Aligned_cols=12 Identities=33% Similarity=0.772 Sum_probs=5.7
Q ss_pred Cccccc--cccccc
Q psy1385 40 IYPCGI--CHKEVH 51 (69)
Q Consensus 40 ~ypCG~--C~~eV~ 51 (69)
.|.|.. |.+...
T Consensus 31 ~~~C~~~~C~~~f~ 44 (85)
T 2j7j_A 31 PYECPHEGCDKRFS 44 (85)
T ss_dssp CEECCSTTCCCEES
T ss_pred CeeCCCCCCcCccC
Confidence 355544 554443
No 319
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=23.48 E-value=34 Score=19.46 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=12.8
Q ss_pred CCCCccccccccccccC
Q psy1385 37 APPIYPCGICHKEVHDN 53 (69)
Q Consensus 37 s~~~ypCG~C~~eV~D~ 53 (69)
++..+.|.||..++.+.
T Consensus 2 ~~~~~~C~IC~~~~~~~ 18 (94)
T 1wim_A 2 SSGSSGCKLCLGEYPVE 18 (94)
T ss_dssp CCSBCCCSSSCCCCBGG
T ss_pred CCCCcCCcccCcccccc
Confidence 34578899999887653
No 320
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=23.20 E-value=33 Score=13.94 Aligned_cols=12 Identities=33% Similarity=0.949 Sum_probs=8.6
Q ss_pred Cccccccccccc
Q psy1385 40 IYPCGICHKEVH 51 (69)
Q Consensus 40 ~ypCG~C~~eV~ 51 (69)
.|.|..|.+...
T Consensus 3 ~~~C~~C~k~f~ 14 (28)
T 2kvf_A 3 PYSCSVCGKRFS 14 (28)
T ss_dssp SEECSSSCCEES
T ss_pred CccCCCCCcccC
Confidence 478888877654
No 321
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=23.18 E-value=31 Score=13.88 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=8.0
Q ss_pred Cccccccccccc
Q psy1385 40 IYPCGICHKEVH 51 (69)
Q Consensus 40 ~ypCG~C~~eV~ 51 (69)
.|.|..|.+...
T Consensus 3 ~~~C~~C~~~f~ 14 (30)
T 2m0d_A 3 PYQCDYCGRSFS 14 (30)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCcccC
Confidence 477877776544
No 322
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=23.16 E-value=31 Score=13.77 Aligned_cols=13 Identities=23% Similarity=0.531 Sum_probs=9.1
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|.+....
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 2m0e_A 2 EHKCPHCDKKFNQ 14 (29)
T ss_dssp CCCCSSCCCCCCT
T ss_pred CCcCCCCCcccCC
Confidence 4788888876543
No 323
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=23.03 E-value=56 Score=20.03 Aligned_cols=27 Identities=26% Similarity=0.796 Sum_probs=18.8
Q ss_pred CCcccccccccc-------ccCCceEEeccccccee
Q psy1385 39 PIYPCGICHKEV-------HDNDQAILCESGCNFWY 67 (69)
Q Consensus 39 ~~ypCG~C~~eV-------~D~ddAI~CE~~C~~WF 67 (69)
=.|+|. |+... .+..+.+.|.+ |--|.
T Consensus 29 y~y~Cr-CGd~F~it~edL~~ge~iv~C~s-CSL~I 62 (83)
T 1wge_A 29 YFYPCP-CGDNFAITKEDLENGEDVATCPS-CSLII 62 (83)
T ss_dssp EEECCS-SSSCEEEEHHHHHTTCCEEECTT-TCCEE
T ss_pred EEEeCC-CCCEEEECHHHHhCCCEEEECCC-CceEE
Confidence 358887 87543 23467888988 98885
No 324
>3dmo_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=22.75 E-value=11 Score=24.82 Aligned_cols=15 Identities=40% Similarity=1.032 Sum_probs=11.7
Q ss_pred CCCcccccccccccc
Q psy1385 38 PPIYPCGICHKEVHD 52 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D 52 (69)
....|||.|.+-+.+
T Consensus 91 ~~~~PCG~CRQ~l~E 105 (138)
T 3dmo_A 91 GPIAPCGACRQVMIE 105 (138)
T ss_dssp SSCCCCHHHHHHHHH
T ss_pred CccCCCHHHHHHHHH
Confidence 467899999876654
No 325
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=22.74 E-value=81 Score=17.38 Aligned_cols=30 Identities=23% Similarity=0.646 Sum_probs=18.4
Q ss_pred CCCccccccccccc------------cCCceEEecc-ccccee
Q psy1385 38 PPIYPCGICHKEVH------------DNDQAILCES-GCNFWY 67 (69)
Q Consensus 38 ~~~ypCG~C~~eV~------------D~ddAI~CE~-~C~~WF 67 (69)
...|.|..|.+... ..+....|.. .|.+.|
T Consensus 32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 74 (124)
T 1ubd_C 32 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF 74 (124)
T ss_dssp CCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEE
T ss_pred CCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCcc
Confidence 44577777776443 2456677762 577766
No 326
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=22.72 E-value=48 Score=20.06 Aligned_cols=13 Identities=15% Similarity=0.552 Sum_probs=6.1
Q ss_pred CceEEeccccccee
Q psy1385 54 DQAILCESGCNFWY 67 (69)
Q Consensus 54 ddAI~CE~~C~~WF 67 (69)
+....|+. |.+-|
T Consensus 76 ~k~~~C~~-C~k~F 88 (133)
T 2lt7_A 76 ERRYQCLA-CGKSF 88 (133)
T ss_dssp CCCEEESS-SCCEE
T ss_pred CccccCCC-CCCCc
Confidence 34455554 54444
No 327
>1wad_A Cytochrome C3; electron transport, calcium binding; HET: HEM; 1.80A {Desulfovibrio gigas} SCOP: a.138.1.1 PDB: 1qn0_A* 1qn1_A*
Probab=22.68 E-value=32 Score=21.81 Aligned_cols=37 Identities=30% Similarity=0.675 Sum_probs=25.5
Q ss_pred CCCceeeCCCCCCCCCCccccccccccccCCceEEecc-ccc
Q psy1385 24 ENQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCES-GCN 64 (69)
Q Consensus 24 ~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~-~C~ 64 (69)
...+.+||=+...+ +.|..||-. ...++..-|.+ +|+
T Consensus 18 ~~~~V~F~H~~H~~---~~C~~CHH~-~g~~~~~~C~~~gCH 55 (112)
T 1wad_A 18 KNLTVVFNHSTHKD---VKCDDCHHD-PGDKQYAGCTTDGCH 55 (112)
T ss_dssp SCCCEEECSGGGTT---SCGGGTSCS-CSTTTTSCTTSTTSS
T ss_pred cCCCccCChHHhCc---CcccccCCC-CCCcCccCccccccc
Confidence 34688999888875 479999987 33344556764 576
No 328
>1j0p_A Cytochrome C3; high resolution Y43L mutant, electron transport; HET: HEM; 0.91A {Desulfovibrio vulgaris} SCOP: a.138.1.1 PDB: 1it1_A* 1j0o_A* 2ffn_A* 1wr5_A* 2ewi_A* 2cdv_A* 2ewk_A* 2yyw_A* 2yxc_A* 2z47_A* 2yyx_A* 2ewu_A* 1a2i_A* 1gx7_E* 2bpn_A* 2cth_A* 2cym_A* 1mdv_A*
Probab=22.61 E-value=27 Score=21.76 Aligned_cols=39 Identities=33% Similarity=0.744 Sum_probs=26.6
Q ss_pred cCCCceeeCCCCCCCCCCccccccccccccCCceEEecc-ccc
Q psy1385 23 PENQAMVFNPQNPNAPPIYPCGICHKEVHDNDQAILCES-GCN 64 (69)
Q Consensus 23 p~~~p~~fn~q~~~s~~~ypCG~C~~eV~D~ddAI~CE~-~C~ 64 (69)
...||.+|+=+.... +-|..||-.+.......-|-+ +|+
T Consensus 14 ~~~~pV~F~H~~H~~---~dC~~CHh~~~~~~~~~~C~~~~CH 53 (108)
T 1j0p_A 14 KTKQPVVFNHSTHKA---VKCGDCHHPVNGKEDLQKCATAGCH 53 (108)
T ss_dssp SSSSCEEECGGGCTT---SCGGGTSCEETTEECCSCTTSTTSS
T ss_pred CcCCCccCChHHhCc---CCccccCCCCCCCCCcccccCccCc
Confidence 357899999988875 689999998743323334541 465
No 329
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=22.31 E-value=45 Score=20.72 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=18.8
Q ss_pred CCccccccccccccCCceEEecccccceeeC
Q psy1385 39 PIYPCGICHKEVHDNDQAILCESGCNFWYHR 69 (69)
Q Consensus 39 ~~ypCG~C~~eV~D~ddAI~CE~~C~~WFHR 69 (69)
..+.|.+|...+.| .+... .|.-.||+
T Consensus 53 ~~~~C~IC~~~~~~---p~~~~-~CgH~fC~ 79 (165)
T 2ckl_B 53 SELMCPICLDMLKN---TMTTK-ECLHRFCA 79 (165)
T ss_dssp HHHBCTTTSSBCSS---EEEET-TTCCEEEH
T ss_pred CCCCCcccChHhhC---cCEeC-CCCChhHH
Confidence 46799999988875 44442 47777763
No 330
>3cbb_A HNF-4-alpha, hepatocyte nuclear factor 4-alpha, DNA binding domain, nuclear; zinc finger; 2.00A {Homo sapiens}
Probab=22.28 E-value=10 Score=22.59 Aligned_cols=27 Identities=26% Similarity=0.728 Sum_probs=17.4
Q ss_pred cccccccccccCC-ceEEecccccceeeC
Q psy1385 42 PCGICHKEVHDND-QAILCESGCNFWYHR 69 (69)
Q Consensus 42 pCG~C~~eV~D~d-dAI~CE~~C~~WFHR 69 (69)
+|-+|+..-+..+ .++-||+ |...|-|
T Consensus 2 ~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 29 (78)
T 3cbb_A 2 LCAICGDRATGKHYGASSCDG-CKGFFRR 29 (78)
T ss_dssp BCTTTSSBCCSEETTEECCHH-HHHHHHH
T ss_pred CCeEeCCCCCceEeCCcchhh-hceeeeE
Confidence 4777876655543 4667777 8777643
No 331
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=22.11 E-value=11 Score=23.21 Aligned_cols=29 Identities=21% Similarity=0.626 Sum_probs=20.1
Q ss_pred CccccccccccccC-CceEEecccccceeeC
Q psy1385 40 IYPCGICHKEVHDN-DQAILCESGCNFWYHR 69 (69)
Q Consensus 40 ~ypCG~C~~eV~D~-ddAI~CE~~C~~WFHR 69 (69)
.-.|-+|+...+.. =.++-|++ |...|-|
T Consensus 7 ~~~C~VCg~~a~g~hyGv~sC~a-Ck~FFRR 36 (94)
T 1a6y_A 7 VLLCKVCGDVASGFHYGVLACEG-CKGFFRR 36 (94)
T ss_dssp -CBCTTTSSBCCEEETTEEECHH-HHHHHHH
T ss_pred CCcCcEeCCCCcceEeCccchhh-hhhehhe
Confidence 45799998766554 35777887 8887744
No 332
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=21.99 E-value=1.1e+02 Score=17.03 Aligned_cols=24 Identities=25% Similarity=0.718 Sum_probs=14.4
Q ss_pred CCCccccccccccccC-----CceEEecc
Q psy1385 38 PPIYPCGICHKEVHDN-----DQAILCES 61 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~-----ddAI~CE~ 61 (69)
..-|.|-.|.+.+.+. |..++|+.
T Consensus 31 ~~CF~C~~C~~~L~~~~~~~~~g~~yC~~ 59 (101)
T 2cup_A 31 DTCFRCAKCLHPLANETFVAKDNKILCNK 59 (101)
T ss_dssp TTTCCCSSSCCCTTSSCCEEETTEEECHH
T ss_pred hcCCcccccCCCCCcCeeECcCCEEEChh
Confidence 3457777777766442 55666654
No 333
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=21.84 E-value=33 Score=14.93 Aligned_cols=12 Identities=25% Similarity=0.736 Sum_probs=9.0
Q ss_pred Cccccccccccc
Q psy1385 40 IYPCGICHKEVH 51 (69)
Q Consensus 40 ~ypCG~C~~eV~ 51 (69)
.|.|..|.+...
T Consensus 2 p~~C~~C~k~f~ 13 (32)
T 2kfq_A 2 AFACPACPKRFM 13 (32)
T ss_dssp CSSSSSSCTTHH
T ss_pred CCCCCCCCcccC
Confidence 488999987654
No 334
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=21.73 E-value=27 Score=21.45 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=17.6
Q ss_pred CCCccccccccccccCCceE-Eecccccc
Q psy1385 38 PPIYPCGICHKEVHDNDQAI-LCESGCNF 65 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D~ddAI-~CE~~C~~ 65 (69)
+..|-|-.|+.++.-++... .|-. |+.
T Consensus 71 p~~~~C~~CG~~~e~~~~~~~~CP~-Cgs 98 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNALDYGVCEK-CHS 98 (119)
T ss_dssp CCEEECSSSSCEECSCCSTTCCCSS-SSS
T ss_pred cceEEcCCCCCEEeCCCCCCCcCcc-ccC
Confidence 45677888887776555555 6766 643
No 335
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=21.72 E-value=28 Score=18.75 Aligned_cols=19 Identities=26% Similarity=0.263 Sum_probs=13.7
Q ss_pred CCCCCCccccccccccccC
Q psy1385 35 PNAPPIYPCGICHKEVHDN 53 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D~ 53 (69)
.++...|.|-.|++.|.+.
T Consensus 4 ~~~~~~~~C~~C~~~i~~~ 22 (39)
T 2i5o_A 4 MAAEDQVPCEKCGSLVPVW 22 (39)
T ss_dssp --CCCEEECTTTCCEEEGG
T ss_pred CCcCCCcccccccCcCCcc
Confidence 3456678999999998763
No 336
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=21.53 E-value=37 Score=13.79 Aligned_cols=13 Identities=23% Similarity=0.876 Sum_probs=9.1
Q ss_pred Ccccccccccccc
Q psy1385 40 IYPCGICHKEVHD 52 (69)
Q Consensus 40 ~ypCG~C~~eV~D 52 (69)
.|.|..|++....
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 3 PFSCSLCPQRSRD 15 (27)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCcChhhCC
Confidence 4788888876543
No 337
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=21.48 E-value=29 Score=20.23 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=13.1
Q ss_pred CCCCCCcccccccccccc
Q psy1385 35 PNAPPIYPCGICHKEVHD 52 (69)
Q Consensus 35 ~~s~~~ypCG~C~~eV~D 52 (69)
......+.|.+|...+.+
T Consensus 10 ~~~~~~~~C~iC~~~~~~ 27 (115)
T 3l11_A 10 IPSLSECQCGICMEILVE 27 (115)
T ss_dssp CCCHHHHBCTTTCSBCSS
T ss_pred cCCCCCCCCccCCcccCc
Confidence 344557889999988765
No 338
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=21.19 E-value=90 Score=16.04 Aligned_cols=32 Identities=16% Similarity=0.460 Sum_probs=18.3
Q ss_pred CCCCCCcccc--cccccccc------------CCceEEeccccccee
Q psy1385 35 PNAPPIYPCG--ICHKEVHD------------NDQAILCESGCNFWY 67 (69)
Q Consensus 35 ~~s~~~ypCG--~C~~eV~D------------~ddAI~CE~~C~~WF 67 (69)
......|.|. .|.+.... .+....|+. |.+.|
T Consensus 30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-C~~~f 75 (89)
T 2wbs_A 30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK-CDRAF 75 (89)
T ss_dssp SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS-SSCEE
T ss_pred cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC-CCccc
Confidence 3444557775 47666544 244566766 66665
No 339
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.95 E-value=54 Score=17.91 Aligned_cols=27 Identities=19% Similarity=0.418 Sum_probs=20.1
Q ss_pred CCCCCcccccccccccc------CCceEEecccc
Q psy1385 36 NAPPIYPCGICHKEVHD------NDQAILCESGC 63 (69)
Q Consensus 36 ~s~~~ypCG~C~~eV~D------~ddAI~CE~~C 63 (69)
--+.-|.|-.|++.+.+ .+..|+|.. |
T Consensus 27 wH~~CF~C~~C~~~L~~~~~f~~~~~~~yC~~-C 59 (73)
T 1wig_A 27 YHPSCALCVRCGQMFAEGEEMYLQGSSIWHPA-C 59 (73)
T ss_dssp BCTTTSCCSSSCCCCCSSCCCEEETTEEECTT-H
T ss_pred CCCCcCEeCCCCCCCCCCCeeEeeCCEEEChH-H
Confidence 34567999999998873 266788876 6
No 340
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=20.92 E-value=40 Score=16.73 Aligned_cols=30 Identities=20% Similarity=0.474 Sum_probs=22.4
Q ss_pred CCCcccccccccccc--------------CCceEEecccccceee
Q psy1385 38 PPIYPCGICHKEVHD--------------NDQAILCESGCNFWYH 68 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D--------------~ddAI~CE~~C~~WFH 68 (69)
...|.|..|.+.... .+....|+. |.+.|-
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~-C~k~f~ 51 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF-CFKEFT 51 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT-TCCEES
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC-CCCccC
Confidence 456999999997532 456788988 988774
No 341
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=20.73 E-value=33 Score=26.25 Aligned_cols=14 Identities=29% Similarity=1.030 Sum_probs=11.7
Q ss_pred CCceEEeccccccee
Q psy1385 53 NDQAILCESGCNFWY 67 (69)
Q Consensus 53 ~ddAI~CE~~C~~WF 67 (69)
....+.|+. |++||
T Consensus 289 ~~~~l~C~~-c~K~F 302 (402)
T 4dgw_A 289 EAKGIYCPF-CSRWF 302 (402)
T ss_dssp TTTEECBTT-TTBCB
T ss_pred CCcCeeehh-hhhhh
Confidence 457899987 99998
No 342
>1ft5_A Cytochrome C554; heme-stacking, electron transport; HET: HEM; 1.60A {Nitrosomonas europaea} SCOP: a.138.1.3 PDB: 1bvb_A* 1ft6_A*
Probab=20.37 E-value=16 Score=24.88 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=19.4
Q ss_pred CCCcccccccccccc------------CCceEEecccccc
Q psy1385 38 PPIYPCGICHKEVHD------------NDQAILCESGCNF 65 (69)
Q Consensus 38 ~~~ypCG~C~~eV~D------------~ddAI~CE~~C~~ 65 (69)
....-|..||...-+ ..+.|.||+ |+.
T Consensus 55 ~~~~~C~~CH~~~~~~~~g~~~~~~~~~~~gv~Ce~-CHg 93 (211)
T 1ft5_A 55 TQDKDCVGCHVDGFGQKGGYTIESPKPMLTGVGCES-CHG 93 (211)
T ss_dssp TTCTTTGGGSBSSTTSTTCCCSSSCCGGGBSSCHHH-HHC
T ss_pred cccccccccCCCccCCCCCccccccccccCCCcchh-hCC
Confidence 457789999988433 245688988 863
No 343
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=20.10 E-value=1.4e+02 Score=17.16 Aligned_cols=28 Identities=18% Similarity=0.396 Sum_probs=17.8
Q ss_pred cccccccccccc------------CCceEEecc-cccceee
Q psy1385 41 YPCGICHKEVHD------------NDQAILCES-GCNFWYH 68 (69)
Q Consensus 41 ypCG~C~~eV~D------------~ddAI~CE~-~C~~WFH 68 (69)
|.|.+|.+.... .+....|+. .|.+.|-
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 103 (155)
T 2rpc_A 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA 103 (155)
T ss_dssp TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence 778888765433 355677763 6777663
No 344
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=20.04 E-value=47 Score=20.18 Aligned_cols=26 Identities=19% Similarity=0.506 Sum_probs=15.8
Q ss_pred CCcccccccccccc--CCceEEecccccc
Q psy1385 39 PIYPCGICHKEVHD--NDQAILCESGCNF 65 (69)
Q Consensus 39 ~~ypCG~C~~eV~D--~ddAI~CE~~C~~ 65 (69)
..|.|..|++...- ......|.. |..
T Consensus 26 ~~y~Cp~CG~~~v~r~atGiW~C~~-Cg~ 53 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQGTGIWQCSY-CDY 53 (83)
T ss_dssp SCEECSSSCCEEEEEEETTEEEETT-TCC
T ss_pred ccCcCCCCCCcceeccCCCeEECCC-CCC
Confidence 36788888874433 244566766 654
Done!