RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13851
(331 letters)
>d1p8ja1 b.18.1.20 (A:443-578) Furin, C-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 136
Score = 112 bits (281), Expect = 3e-31
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 174 TVPARYHCEAGSVKQVTEIPSSRSILLKIKTNACEGEDTQVSYVEHVQAVITLNATTRGA 233
TV + C + + +I + ++ AC GE ++ +EHVQA +TL+ RG
Sbjct: 1 TVAPQRKCIVEILVEPKDIGKR--LEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGD 58
Query: 234 VELFLTSPMGTRSMILSKRINDNDRRDGFTKWPFMTTHTWGEYPQGTWLLEVS 286
+ + L SPMGTRS +L+ R +D DGF W FMTTH+W E P G W+LE+
Sbjct: 59 LAIHLISPMGTRSTLLAARPHD-YSADGFNDWAFMTTHSWDEDPAGEWVLEIE 110
>d2id4a1 b.18.1.20 (A:461-601) Kexin, C-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 141
Score = 90.5 bits (224), Expect = 7e-23
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 169 AKQWKTVPARYHCEAGSVKQVTEIP-SSRSILLKIKTNACEGEDTQVSYVEHVQAVITLN 227
A+ W +P Y ++ + ++ I + +D +EHV + ++
Sbjct: 4 AQTWFYLPTLYVSQS--------TNSTEETLESVITISEKSLQDANFKRIEHVTVTVDID 55
Query: 228 ATTRGAVELFLTSPMGTRSMILSKRINDNDRRDGFTKWPFMTTHTWGEYPQGTWLLEVS 286
RG + L SP G S + R D +GF W FM+ WGE G W ++V
Sbjct: 56 TEIRGTTTVDLISPAGIISNLGVVRPRD-VSSEGFKDWTFMSVAHWGENGVGDWKIKVK 113
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 334
Score = 74.0 bits (180), Expect = 2e-15
Identities = 71/172 (41%), Positives = 90/172 (52%), Gaps = 42/172 (24%)
Query: 1 MWTISINSAINDGQNAHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTHSGTSAA 60
++T+SI+SA G Y E+CSSTLA+T+S + TTDL KCT +H+GTSA+
Sbjct: 204 IYTLSISSATQFGNVPWYSEACSSTLATTYS-SGNQNEKQIVTTDLRQKCTESHTGTSAS 262
Query: 61 APEAAGVFALALEANPQLTWRDIQHLTVLTSKRNSLFCCSTRGSWCVRSGLGSKLTWRDI 120
AP AAG+ AL LEAN LTWRD+QHL V TSK L
Sbjct: 263 APLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL------------------------ 298
Query: 121 QHLTVLTSKRNSLFDAKGRFHWTMNGVGLEFNHLFGFGVLDAGAMVALAKQW 172
W NGVG + +H +G+G+LDAGAMVALA+ W
Sbjct: 299 -----------------NADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNW 333
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 339
Score = 74.1 bits (180), Expect = 2e-15
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 40/127 (31%)
Query: 47 YGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKRNSLFCCSTRGSWC 106
G+C+ +H GTSAAAP AAGV+ L LEANP LTWRD+Q+L++L++
Sbjct: 253 NGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVG------------- 299
Query: 107 VRSGLGSKLTWRDIQHLTVLTSKRNSLFDAKGRFHWTMNGVGLEFNHLFGFGVLDAGAMV 166
+ W + +G +++H +GFG +DA ++
Sbjct: 300 ---------------------------LEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLI 332
Query: 167 ALAKQWK 173
++K W+
Sbjct: 333 EMSKTWE 339
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans
[TaxId: 93466]}
Length = 671
Score = 56.2 bits (134), Expect = 2e-09
Identities = 41/271 (15%), Positives = 70/271 (25%), Gaps = 82/271 (30%)
Query: 16 AHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTHSGTSAAAPEAAGVFALALEAN 75
+ ST+ S G + N V T+ G + GTS AAP GV A+ L+
Sbjct: 341 GAPGVTILSTVPGEDSIGYEGHNENVPATN--GGTYDYYQGTSMAAPHVTGVVAVLLQKF 398
Query: 76 PQLTWRDIQHLTVLTSKRNSLFCCSTRGSWCVRSGLGSKLTWRDIQHLTVLTSKRNSLFD 135
P I+ L T+
Sbjct: 399 PNAKPWQIRKLLENTAFD------------------------------------------ 416
Query: 136 AKGRFHWTMNGVGLEFNHLFGFGVLDAGAMVALAKQWKTVPARYHCEAGSVKQVTEIPSS 195
NG G ++H G+G++ A + + + QV +
Sbjct: 417 --------FNGNG--WDHDTGYGLVKLDAALQGPLPTQGGVEEF--------QVVVTDAK 458
Query: 196 RSILLKIKTNACEGEDTQVSYVEHVQAVITLNATTRGAVELFLTSPMGTRSMILSKRIND 255
+ + + ++ Y T + F GT + +
Sbjct: 459 GNFGVPTVFVSMMRDNGSCYYA----------KTGPDGIARFPHIDSGTYDIFVG----- 503
Query: 256 NDRRDGFTKWPFMTTHTWGEYPQGTWLLEVS 286
G W GE G + + +
Sbjct: 504 -----GPDHWDRALAPYDGESIPGGYAIALR 529
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens,
Novo/BPN' [TaxId: 1390]}
Length = 281
Score = 51.4 bits (122), Expect = 4e-08
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 2 WTISINSAINDGQNAHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTHSGTSAAA 61
I++ + + Q A + P + +T G ++GTS A+
Sbjct: 173 SVIAVGAVDSSNQRASFSSVGPELDVMA-------PGVSIQSTL-PGNKYGAYNGTSMAS 224
Query: 62 PEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
P AG AL L +P T ++ T+ +
Sbjct: 225 PHVAGAAALILSKHPNWTNTQVRSSLENTTTK 256
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]}
Length = 269
Score = 51.1 bits (121), Expect = 4e-08
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 2 WTISINSAINDGQNAHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTHSGTSAAA 61
+++ + + A + + + + G + +GTS A
Sbjct: 167 NAMAVGATDQNNNRASFSQYGAGLDIVAP--------GVNVQSTYPGSTYASLNGTSMAT 218
Query: 62 PEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
P AG AL + NP + I++ T+
Sbjct: 219 PHVAGAAALVKQKNPSWSNVQIRNHLKNTATS 250
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg
[TaxId: 1423]}
Length = 274
Score = 50.7 bits (120), Expect = 6e-08
Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 19/112 (16%)
Query: 1 MWTISINSAINDGQNAHYDESCSSTLA-STFSNGAKDPNTGVATTDLYGKC--------- 50
+ + +A N G + + S + GA D N+ A+ G
Sbjct: 144 RGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVMAPGAG 203
Query: 51 ---------TTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
T +GTS A+P AG AL L +P L+ +++ T+
Sbjct: 204 VYSTYPTNTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATY 255
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium
album), strain limber [TaxId: 37998]}
Length = 279
Score = 44.7 bits (104), Expect = 6e-06
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 47 YGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSK 92
G T + SGTS A P AG+ A + +++ +K
Sbjct: 213 IGGSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRYIADTANK 258
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1
{Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Length = 435
Score = 44.7 bits (104), Expect = 1e-05
Identities = 10/57 (17%), Positives = 22/57 (38%)
Query: 36 DPNTGVATTDLYGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSK 92
++ + ++GTS A P +GV L +P+ + ++ T+
Sbjct: 347 KLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATAD 403
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId:
1421]}
Length = 309
Score = 42.6 bits (98), Expect = 3e-05
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 47 YGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
Y T SGTS A P +G+ A NP L+ ++ +K
Sbjct: 239 YNGGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKS 285
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas
sp., sedolisin [TaxId: 306]}
Length = 369
Score = 40.0 bits (92), Expect = 2e-04
Identities = 24/163 (14%), Positives = 38/163 (23%), Gaps = 34/163 (20%)
Query: 11 NDGQNAHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTH-SGTSAAAPEAAGVFA 69
+ S T +Y GTS A+P G++A
Sbjct: 238 VYESKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWA 297
Query: 70 LALEANPQLTWRDIQHLTVLTSKRNSLFCCSTRGSWCVRSGLGSKLTWRDIQHLTVLTSK 129
AN S SL G+
Sbjct: 298 RLQSANSNSLGFPAASFYSAISSTPSLVHDVKSGN----------------------NGY 335
Query: 130 RNSLFDAKGRFHWTMNGVGLEFNHLFGFGVLDAGAMVALAKQW 172
++A G G +++ G+G LD + A +
Sbjct: 336 GGYGYNA---------GTG--WDYPTGWGSLDIAKLSAYIRSN 367
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus
novosp. MN-32, kumamolisin [TaxId: 198803]}
Length = 357
Score = 40.1 bits (92), Expect = 3e-04
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 10/110 (9%)
Query: 9 AINDGQNAHYDESCSSTLASTFSNGAKDPNTGVATTDLYGKCTTTHSGTSAAAPEAAGVF 68
+ + N + + + A + + + TT GTSA AP A +
Sbjct: 229 SWQERANVPPSANPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALV 288
Query: 69 ALALEA--------NPQLTWRDIQHLTVLTSKRNSLFCCSTRGSWCVRSG 110
A + NP L + +T N + + G
Sbjct: 289 ARINQKLGKPVGYLNPTLYQLPPEVFHDITEGNND--IANRARIYQAGPG 336
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp.,
AK.1 [TaxId: 1409]}
Length = 280
Score = 36.5 bits (83), Expect = 0.003
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 47 YGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
G SGTS A+P AG+ AL +I+ T+ +
Sbjct: 215 TGNRYAYMSGTSMASPHVAGLAALLASQGR--NNIEIRQAIEQTADK 259
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris
[TaxId: 2026]}
Length = 279
Score = 35.8 bits (81), Expect = 0.005
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 50 CTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKR 93
+ SGTS A P AGV L + +I+ T+ +
Sbjct: 217 TYASLSGTSMATPHVAGVAGLLASQGR--SASNIRAAIENTADK 258
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43,
N-terminal domain {Bacillus sp. KSM-KP43 [TaxId:
109322]}
Length = 318
Score = 35.2 bits (79), Expect = 0.008
Identities = 9/53 (16%), Positives = 14/53 (26%)
Query: 43 TTDLYGKCTTTHSGTSAAAPEAAGVFALALEANPQLTWRDIQHLTVLTSKRNS 95
+ GTS A P AG A E + + + +
Sbjct: 240 FWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAG 292
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase,
QPCT {Human (Homo sapiens) [TaxId: 9606]}
Length = 329
Score = 26.7 bits (58), Expect = 4.6
Identities = 8/28 (28%), Positives = 9/28 (32%)
Query: 16 AHYDESCSSTLASTFSNGAKDPNTGVAT 43
HYD S + GA D A
Sbjct: 107 CHYDSKYFSHWNNRVFVGATDSAVPCAM 134
>d1vgga_ d.256.1.1 (A:) Hypothetical protein TT1634 (TTHA1091)
{Thermus thermophilus [TaxId: 274]}
Length = 161
Score = 25.4 bits (56), Expect = 6.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 40 GVATTDLYGKCTTTHSGTSAAAPEAAGVFALALEA 74
G+A ++ GK SGT A E A L L
Sbjct: 44 GLAFSEASGKRLVRRSGTDEALVELAVKNLLNLAC 78
>d1rlha_ d.256.1.1 (A:) Hypothetical protein Ta1353 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 151
Score = 25.1 bits (55), Expect = 8.1
Identities = 5/35 (14%), Positives = 11/35 (31%)
Query: 40 GVATTDLYGKCTTTHSGTSAAAPEAAGVFALALEA 74
G+ ++ G + G +A + A
Sbjct: 53 GIGFSEASGDRLIRYDGNDDDLVKACIENIRRISA 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.131 0.412
Gapped
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,191,987
Number of extensions: 51215
Number of successful extensions: 144
Number of sequences better than 10.0: 1
Number of HSP's gapped: 139
Number of HSP's successfully gapped: 26
Length of query: 331
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 245
Effective length of database: 1,226,816
Effective search space: 300569920
Effective search space used: 300569920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.1 bits)