Query psy13856
Match_columns 271
No_of_seqs 275 out of 2273
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 22:10:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.6E-28 5.5E-33 201.8 25.7 195 26-236 83-292 (321)
2 4gqb_B Methylosome protein 50; 100.0 1.8E-28 6.2E-33 203.3 25.5 183 26-221 130-332 (344)
3 3ow8_A WD repeat-containing pr 100.0 7.1E-28 2.4E-32 198.0 24.6 209 10-236 19-250 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 1.1E-27 3.7E-32 195.3 25.2 199 25-237 15-231 (304)
5 1vyh_C Platelet-activating fac 100.0 4.3E-28 1.5E-32 205.8 22.9 199 26-236 153-382 (410)
6 2ynn_A Coatomer subunit beta'; 100.0 2.9E-27 1E-31 192.7 26.9 193 29-235 61-271 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-27 3.9E-32 198.6 24.8 184 25-219 18-224 (345)
8 3frx_A Guanine nucleotide-bind 100.0 2.9E-27 1E-31 194.1 26.7 193 26-232 20-236 (319)
9 1vyh_C Platelet-activating fac 100.0 2.1E-27 7.2E-32 201.5 26.2 195 26-236 111-340 (410)
10 4g56_B MGC81050 protein; prote 100.0 9.5E-28 3.3E-32 200.0 22.6 185 26-223 142-346 (357)
11 1erj_A Transcriptional repress 100.0 1E-26 3.5E-31 196.2 27.4 197 27-237 127-355 (393)
12 4gqb_B Methylosome protein 50; 100.0 2.3E-27 7.7E-32 196.7 22.5 191 29-236 88-301 (344)
13 1got_B GT-beta; complex (GTP-b 100.0 1.2E-26 4.3E-31 191.9 26.4 188 24-221 56-258 (340)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-26 3.8E-31 192.6 25.8 188 26-221 64-336 (345)
15 4h5i_A Guanine nucleotide-exch 100.0 5.5E-27 1.9E-31 196.0 24.0 190 29-233 139-361 (365)
16 2pm7_B Protein transport prote 100.0 1.4E-26 4.8E-31 188.1 24.9 193 34-231 66-296 (297)
17 3bg1_A Protein SEC13 homolog; 100.0 5.4E-27 1.9E-31 192.2 22.5 197 34-234 70-307 (316)
18 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-26 1.4E-30 187.5 26.9 189 34-233 70-350 (351)
19 1got_B GT-beta; complex (GTP-b 100.0 4.4E-26 1.5E-30 188.6 26.6 194 27-237 101-315 (340)
20 4ery_A WD repeat-containing pr 100.0 7.6E-26 2.6E-30 184.7 27.6 196 25-235 25-235 (312)
21 2pm7_B Protein transport prote 100.0 2.3E-26 7.9E-31 186.8 23.6 190 25-221 11-239 (297)
22 2pbi_B Guanine nucleotide-bind 100.0 1.2E-25 4.2E-30 187.0 26.8 191 23-221 64-272 (354)
23 3frx_A Guanine nucleotide-bind 100.0 8.9E-26 3E-30 185.2 25.4 180 27-220 69-317 (319)
24 2hes_X YDR267CP; beta-propelle 99.9 1.2E-25 4E-30 185.4 25.1 196 26-229 61-288 (330)
25 4e54_B DNA damage-binding prot 99.9 6.9E-27 2.4E-31 199.7 18.3 183 27-221 123-328 (435)
26 2pbi_B Guanine nucleotide-bind 99.9 2.1E-25 7.1E-30 185.7 26.7 216 5-236 77-328 (354)
27 1nr0_A Actin interacting prote 99.9 1.4E-25 4.6E-30 199.6 27.0 188 26-231 62-278 (611)
28 2ymu_A WD-40 repeat protein; u 99.9 8.9E-26 3.1E-30 198.9 24.7 172 29-217 391-577 (577)
29 4aow_A Guanine nucleotide-bind 99.9 3.3E-25 1.1E-29 182.4 25.7 196 23-232 38-255 (340)
30 1nr0_A Actin interacting prote 99.9 1.4E-25 4.9E-30 199.4 24.1 189 25-230 20-228 (611)
31 2hes_X YDR267CP; beta-propelle 99.9 3.8E-25 1.3E-29 182.3 24.9 186 25-220 16-230 (330)
32 3iz6_a 40S ribosomal protein R 99.9 6.2E-26 2.1E-30 190.5 20.5 199 22-232 65-289 (380)
33 2xzm_R RACK1; ribosome, transl 99.9 7.7E-25 2.6E-29 181.3 26.1 176 33-220 37-244 (343)
34 4g56_B MGC81050 protein; prote 99.9 3E-25 1E-29 184.9 23.7 192 27-235 98-312 (357)
35 3bg1_A Protein SEC13 homolog; 99.9 2.3E-26 8E-31 188.4 15.0 176 22-236 12-214 (316)
36 2ymu_A WD-40 repeat protein; u 99.9 1.7E-24 5.9E-29 190.7 26.9 190 27-237 348-552 (577)
37 3jrp_A Fusion protein of prote 99.9 2.9E-24 9.9E-29 179.0 25.3 192 33-232 67-299 (379)
38 3dwl_C Actin-related protein 2 99.9 6.6E-26 2.3E-30 189.6 15.1 190 25-223 13-239 (377)
39 3dm0_A Maltose-binding peripla 99.9 8E-25 2.7E-29 197.3 23.3 184 34-231 394-600 (694)
40 2xzm_R RACK1; ribosome, transl 99.9 5E-24 1.7E-28 176.4 26.2 179 27-221 80-286 (343)
41 3iz6_a 40S ribosomal protein R 99.9 9.4E-25 3.2E-29 183.3 21.2 151 33-221 216-376 (380)
42 1erj_A Transcriptional repress 99.9 9.5E-24 3.3E-28 178.0 25.0 181 26-220 168-389 (393)
43 4ggc_A P55CDC, cell division c 99.9 2E-23 6.7E-28 170.2 25.6 207 3-220 35-315 (318)
44 4ery_A WD repeat-containing pr 99.9 9.4E-24 3.2E-28 172.3 23.6 195 26-236 68-281 (312)
45 1k8k_C P40, ARP2/3 complex 41 99.9 1.5E-23 5.1E-28 174.6 25.2 194 25-234 10-244 (372)
46 3gre_A Serine/threonine-protei 99.9 2.7E-24 9.1E-29 183.4 20.5 208 16-236 56-305 (437)
47 3dm0_A Maltose-binding peripla 99.9 2.2E-23 7.4E-28 188.0 26.3 190 27-234 434-643 (694)
48 3ei3_B DNA damage-binding prot 99.9 1.9E-23 6.5E-28 175.2 24.1 183 24-223 74-285 (383)
49 3jrp_A Fusion protein of prote 99.9 1.7E-23 5.7E-28 174.4 23.6 172 23-235 11-207 (379)
50 3k26_A Polycomb protein EED; W 99.9 1.6E-23 5.5E-28 173.7 21.6 179 28-219 120-365 (366)
51 1gxr_A ESG1, transducin-like e 99.9 3.2E-22 1.1E-26 164.1 28.7 203 4-221 63-297 (337)
52 4gga_A P55CDC, cell division c 99.9 8.4E-23 2.9E-27 173.6 25.9 208 3-221 115-396 (420)
53 1gxr_A ESG1, transducin-like e 99.9 7.3E-23 2.5E-27 167.9 24.4 176 28-219 146-336 (337)
54 3vl1_A 26S proteasome regulato 99.9 3.1E-23 1.1E-27 175.7 22.4 179 32-222 106-324 (420)
55 3f3f_A Nucleoporin SEH1; struc 99.9 3.6E-23 1.2E-27 169.9 22.1 165 23-221 11-250 (351)
56 3zwl_B Eukaryotic translation 99.9 8.5E-23 2.9E-27 169.4 24.5 185 24-221 33-250 (369)
57 1r5m_A SIR4-interacting protei 99.9 9.7E-23 3.3E-27 172.2 25.2 192 26-234 111-330 (425)
58 4aow_A Guanine nucleotide-bind 99.9 2.1E-22 7.3E-27 165.5 25.0 184 27-221 90-338 (340)
59 1k8k_C P40, ARP2/3 complex 41 99.9 1.3E-22 4.3E-27 168.9 23.7 194 28-232 57-287 (372)
60 3vl1_A 26S proteasome regulato 99.9 4.2E-23 1.4E-27 174.9 21.1 184 26-222 142-367 (420)
61 2j04_B YDR362CP, TAU91; beta p 99.9 1.5E-23 5.1E-28 182.6 17.2 173 34-220 224-428 (524)
62 2oaj_A Protein SNI1; WD40 repe 99.9 6.3E-23 2.2E-27 189.5 21.6 173 30-218 442-659 (902)
63 2oaj_A Protein SNI1; WD40 repe 99.9 6E-23 2E-27 189.7 21.4 185 23-221 17-243 (902)
64 2w18_A PALB2, fancn, partner a 99.9 1.8E-22 6.1E-27 163.8 21.5 169 33-218 143-355 (356)
65 3odt_A Protein DOA1; ubiquitin 99.9 6.6E-22 2.3E-26 160.6 25.0 192 26-235 21-226 (313)
66 2pm9_A Protein WEB1, protein t 99.9 6.7E-23 2.3E-27 173.2 19.7 198 27-235 71-306 (416)
67 3v7d_B Cell division control p 99.9 5.4E-22 1.9E-26 170.4 24.8 185 34-237 131-355 (464)
68 3i2n_A WD repeat-containing pr 99.9 1.8E-22 6.2E-27 166.9 20.8 181 32-221 126-354 (357)
69 1sq9_A Antiviral protein SKI8; 99.9 4.7E-22 1.6E-26 167.1 23.5 189 29-231 68-330 (397)
70 2aq5_A Coronin-1A; WD40 repeat 99.9 1.4E-22 4.9E-27 171.1 20.3 157 37-234 49-219 (402)
71 3i2n_A WD repeat-containing pr 99.9 2.4E-22 8.1E-27 166.2 21.1 186 27-221 69-292 (357)
72 3jro_A Fusion protein of prote 99.9 7.7E-23 2.6E-27 185.9 19.7 192 31-230 63-295 (753)
73 4aez_A CDC20, WD repeat-contai 99.9 4.1E-22 1.4E-26 168.3 22.7 176 34-221 185-381 (401)
74 3dw8_B Serine/threonine-protei 99.9 2.8E-22 9.6E-27 171.0 21.6 196 24-233 29-326 (447)
75 4a11_B DNA excision repair pro 99.9 3.5E-22 1.2E-26 168.1 21.7 185 23-221 43-277 (408)
76 2j04_B YDR362CP, TAU91; beta p 99.9 2.1E-23 7.3E-28 181.6 14.1 178 33-221 171-387 (524)
77 3v7d_B Cell division control p 99.9 2E-21 6.9E-26 166.8 26.1 179 30-221 169-382 (464)
78 2aq5_A Coronin-1A; WD40 repeat 99.9 1.6E-21 5.5E-26 164.6 25.0 195 26-231 84-311 (402)
79 3mkq_A Coatomer beta'-subunit; 99.9 5.2E-22 1.8E-26 181.6 23.5 195 26-235 16-229 (814)
80 1yfq_A Cell cycle arrest prote 99.9 7.4E-22 2.5E-26 162.5 21.9 191 27-233 60-292 (342)
81 4aez_A CDC20, WD repeat-contai 99.9 1.4E-21 4.9E-26 165.0 23.8 175 34-221 102-294 (401)
82 4h5i_A Guanine nucleotide-exch 99.9 2.5E-22 8.5E-27 167.8 18.7 185 40-238 99-316 (365)
83 3jro_A Fusion protein of prote 99.9 7.6E-22 2.6E-26 179.4 23.4 173 23-236 9-206 (753)
84 1sq9_A Antiviral protein SKI8; 99.9 4.4E-22 1.5E-26 167.3 20.2 147 29-221 192-396 (397)
85 3dwl_C Actin-related protein 2 99.9 2.4E-22 8.1E-27 168.0 18.0 185 26-220 58-281 (377)
86 3odt_A Protein DOA1; ubiquitin 99.9 3.5E-21 1.2E-25 156.4 24.3 185 27-235 63-267 (313)
87 3k26_A Polycomb protein EED; W 99.9 2.5E-22 8.6E-27 166.5 17.9 186 35-233 85-332 (366)
88 4gq1_A NUP37; propeller, trans 99.9 7.8E-23 2.7E-27 172.4 15.0 147 33-221 99-287 (393)
89 2xyi_A Probable histone-bindin 99.9 1.1E-21 3.9E-26 167.2 22.2 187 27-220 185-410 (430)
90 3lrv_A PRE-mRNA-splicing facto 99.9 2.1E-21 7.2E-26 160.6 23.0 175 38-226 88-299 (343)
91 1r5m_A SIR4-interacting protei 99.9 2.3E-21 7.8E-26 163.8 23.6 151 55-219 242-424 (425)
92 2pm9_A Protein WEB1, protein t 99.9 4.9E-22 1.7E-26 167.9 19.3 182 29-222 119-339 (416)
93 3sfz_A APAF-1, apoptotic pepti 99.9 1.5E-21 5E-26 186.2 24.7 198 24-235 616-883 (1249)
94 4ggc_A P55CDC, cell division c 99.9 6.9E-21 2.4E-25 155.0 25.1 189 33-237 35-287 (318)
95 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-20 3.6E-25 162.0 27.1 195 26-233 105-354 (450)
96 3zwl_B Eukaryotic translation 99.9 2.2E-20 7.5E-25 154.8 27.9 195 27-236 78-317 (369)
97 3ei3_B DNA damage-binding prot 99.9 1E-21 3.5E-26 164.6 19.9 181 27-220 167-382 (383)
98 3mmy_A MRNA export factor; mRN 99.9 2.2E-21 7.7E-26 160.8 21.3 222 4-236 54-317 (368)
99 3lrv_A PRE-mRNA-splicing facto 99.9 4.3E-22 1.5E-26 164.8 16.3 180 26-222 39-246 (343)
100 3mkq_A Coatomer beta'-subunit; 99.9 3.1E-21 1.1E-25 176.4 23.4 193 27-233 59-269 (814)
101 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-21 3.6E-26 168.9 18.9 177 21-222 13-213 (588)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.2E-21 1.1E-25 165.3 21.7 155 67-232 105-280 (450)
103 1pgu_A Actin interacting prote 99.9 2.3E-20 7.7E-25 165.2 27.7 189 26-233 67-293 (615)
104 2xyi_A Probable histone-bindin 99.9 5.7E-21 1.9E-25 162.9 22.9 188 26-221 131-354 (430)
105 3gre_A Serine/threonine-protei 99.9 2.7E-21 9.3E-26 164.8 20.8 172 32-217 179-437 (437)
106 4a11_B DNA excision repair pro 99.9 1.6E-20 5.4E-25 157.9 25.1 184 27-221 103-366 (408)
107 3vu4_A KMHSV2; beta-propeller 99.9 1.6E-20 5.6E-25 156.1 24.8 172 33-221 68-272 (355)
108 1p22_A F-BOX/WD-repeat protein 99.9 1.5E-20 5.2E-25 160.3 24.9 181 34-236 142-338 (435)
109 1pgu_A Actin interacting prote 99.9 4.2E-21 1.4E-25 169.9 22.0 144 35-220 456-614 (615)
110 1p22_A F-BOX/WD-repeat protein 99.9 1.1E-20 3.9E-25 161.1 23.5 185 34-237 182-388 (435)
111 4e54_B DNA damage-binding prot 99.9 4.6E-22 1.6E-26 169.9 14.7 179 34-221 176-431 (435)
112 3dw8_B Serine/threonine-protei 99.9 4.8E-21 1.7E-25 163.4 21.0 179 29-221 99-374 (447)
113 4gga_A P55CDC, cell division c 99.9 1.8E-20 6.1E-25 159.2 24.0 183 35-232 116-319 (420)
114 2j04_A TAU60, YPL007P, hypothe 99.9 3.3E-21 1.1E-25 165.9 19.1 161 23-221 85-255 (588)
115 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.7E-20 5.9E-25 160.4 23.5 181 33-235 127-320 (445)
116 3sfz_A APAF-1, apoptotic pepti 99.9 1.9E-21 6.6E-26 185.4 18.3 183 27-222 965-1160(1249)
117 4gq1_A NUP37; propeller, trans 99.9 2.2E-21 7.4E-26 163.6 15.4 173 33-219 154-388 (393)
118 1yfq_A Cell cycle arrest prote 99.9 8.3E-21 2.8E-25 156.2 18.5 187 22-221 10-226 (342)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.7E-20 1.6E-24 157.7 22.8 171 34-221 248-443 (445)
120 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-19 3.6E-24 151.2 20.4 144 36-222 148-338 (355)
121 3mmy_A MRNA export factor; mRN 99.8 2.5E-19 8.4E-24 148.4 18.6 153 24-222 40-249 (368)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 1.8E-19 6.3E-24 153.7 15.9 153 33-219 46-222 (434)
123 2oit_A Nucleoporin 214KDA; NH2 99.8 5.3E-18 1.8E-22 144.7 18.7 150 26-221 95-279 (434)
124 1l0q_A Surface layer protein; 99.8 1.2E-16 4.1E-21 133.9 25.9 188 28-234 78-286 (391)
125 1l0q_A Surface layer protein; 99.8 9.9E-17 3.4E-21 134.4 25.3 186 27-233 35-243 (391)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 1E-16 3.4E-21 136.0 22.4 187 27-234 182-397 (415)
127 2w18_A PALB2, fancn, partner a 99.8 5.3E-18 1.8E-22 137.7 12.9 131 34-174 192-355 (356)
128 3bws_A Protein LP49; two-domai 99.8 2.8E-16 9.5E-21 133.5 23.4 182 31-232 177-399 (433)
129 3bws_A Protein LP49; two-domai 99.8 1.8E-16 6.1E-21 134.7 22.0 176 29-221 128-335 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 6.4E-16 2.2E-20 131.1 22.1 171 35-221 143-345 (415)
131 2ojh_A Uncharacterized protein 99.7 1.9E-14 6.6E-19 115.1 21.4 192 26-232 44-269 (297)
132 1nir_A Nitrite reductase; hemo 99.7 2.6E-14 8.8E-19 125.2 21.9 188 31-231 145-363 (543)
133 1xfd_A DIP, dipeptidyl aminope 99.6 6.8E-15 2.3E-19 133.0 18.6 185 24-221 17-290 (723)
134 1ri6_A Putative isomerase YBHE 99.6 1.4E-12 4.9E-17 106.7 27.8 193 31-232 45-275 (343)
135 3o4h_A Acylamino-acid-releasin 99.6 1.9E-14 6.5E-19 127.0 17.4 182 23-221 21-228 (582)
136 1nir_A Nitrite reductase; hemo 99.6 1.4E-13 4.8E-18 120.5 22.4 194 27-236 182-422 (543)
137 3hfq_A Uncharacterized protein 99.6 7.4E-13 2.5E-17 109.1 24.6 192 32-232 48-283 (347)
138 2ojh_A Uncharacterized protein 99.6 2.6E-13 8.8E-18 108.5 20.7 164 40-219 17-203 (297)
139 1k32_A Tricorn protease; prote 99.6 9.5E-14 3.2E-18 130.6 19.9 174 30-221 251-462 (1045)
140 3hfq_A Uncharacterized protein 99.6 3.7E-12 1.3E-16 104.9 26.5 190 32-227 94-325 (347)
141 1pby_B Quinohemoprotein amine 99.6 2.9E-13 1E-17 110.5 19.6 179 31-232 89-319 (337)
142 1ri6_A Putative isomerase YBHE 99.6 2.7E-13 9.1E-18 111.1 19.0 150 37-227 7-167 (343)
143 2ecf_A Dipeptidyl peptidase IV 99.6 7.8E-14 2.7E-18 126.4 17.3 182 27-221 40-322 (741)
144 2ecf_A Dipeptidyl peptidase IV 99.5 5.1E-13 1.8E-17 121.0 19.8 177 27-221 112-368 (741)
145 3vgz_A Uncharacterized protein 99.5 2.2E-12 7.6E-17 106.1 21.5 181 27-221 44-263 (353)
146 3u4y_A Uncharacterized protein 99.5 1.3E-11 4.6E-16 100.7 24.0 183 34-231 9-218 (331)
147 1z68_A Fibroblast activation p 99.5 1.3E-13 4.4E-18 124.6 12.9 179 28-217 20-284 (719)
148 3vgz_A Uncharacterized protein 99.5 2.5E-11 8.7E-16 99.7 25.1 185 31-231 96-311 (353)
149 3u4y_A Uncharacterized protein 99.5 4.8E-12 1.7E-16 103.4 20.1 189 29-230 45-261 (331)
150 3scy_A Hypothetical bacterial 99.5 7.6E-11 2.6E-15 97.6 27.6 189 31-232 57-304 (361)
151 1jmx_B Amine dehydrogenase; ox 99.5 5E-12 1.7E-16 103.8 20.1 186 31-233 50-335 (349)
152 1k32_A Tricorn protease; prote 99.5 1.3E-12 4.3E-17 123.0 17.6 146 27-219 341-501 (1045)
153 2z3z_A Dipeptidyl aminopeptida 99.5 2E-12 6.7E-17 116.6 17.6 173 30-219 88-341 (706)
154 3o4h_A Acylamino-acid-releasin 99.5 4E-13 1.4E-17 118.6 12.9 143 26-218 114-274 (582)
155 2z3z_A Dipeptidyl aminopeptida 99.4 3.8E-12 1.3E-16 114.8 17.8 178 35-225 35-298 (706)
156 3scy_A Hypothetical bacterial 99.4 4.9E-11 1.7E-15 98.8 23.1 153 29-220 160-337 (361)
157 1xfd_A DIP, dipeptidyl aminope 99.4 3.8E-12 1.3E-16 114.9 16.8 174 28-217 65-341 (723)
158 4a5s_A Dipeptidyl peptidase 4 99.4 9.9E-12 3.4E-16 112.8 16.0 190 22-222 15-296 (740)
159 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.7E-10 9.2E-15 94.6 23.2 183 29-221 88-342 (365)
160 1jmx_B Amine dehydrogenase; ox 99.4 2.1E-11 7.3E-16 100.0 16.1 152 31-231 7-183 (349)
161 1pby_B Quinohemoprotein amine 99.4 2.8E-11 9.4E-16 98.7 16.6 148 36-232 2-172 (337)
162 3pe7_A Oligogalacturonate lyas 99.4 2.3E-10 7.8E-15 95.4 22.4 186 29-231 41-283 (388)
163 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.9E-10 1.3E-14 93.7 22.1 185 31-226 47-297 (365)
164 1z68_A Fibroblast activation p 99.3 7.2E-12 2.5E-16 113.2 11.7 181 26-220 62-346 (719)
165 4a5s_A Dipeptidyl peptidase 4 99.3 8.3E-11 2.8E-15 106.8 16.7 177 32-220 70-353 (740)
166 1q7f_A NHL, brain tumor CG1071 99.3 4.7E-09 1.6E-13 83.9 23.1 170 33-220 87-280 (286)
167 3azo_A Aminopeptidase; POP fam 99.2 4.7E-10 1.6E-14 100.3 16.3 149 32-219 87-271 (662)
168 3fvz_A Peptidyl-glycine alpha- 99.2 1.4E-08 4.8E-13 83.1 23.0 172 32-220 99-322 (329)
169 3e5z_A Putative gluconolactona 99.2 1.6E-08 5.4E-13 81.3 21.9 171 33-219 37-245 (296)
170 3no2_A Uncharacterized protein 99.1 1E-08 3.5E-13 81.9 19.6 168 34-221 4-196 (276)
171 3azo_A Aminopeptidase; POP fam 99.1 1.3E-09 4.5E-14 97.4 16.0 149 28-219 134-322 (662)
172 1q7f_A NHL, brain tumor CG1071 99.1 2.4E-08 8.2E-13 79.7 21.7 171 32-219 38-237 (286)
173 3pe7_A Oligogalacturonate lyas 99.1 3.7E-09 1.3E-13 88.0 17.3 181 28-221 85-330 (388)
174 3fvz_A Peptidyl-glycine alpha- 99.1 1.2E-08 4.2E-13 83.4 19.7 186 29-231 29-285 (329)
175 2oiz_A Aromatic amine dehydrog 99.1 1.2E-08 4E-13 84.7 19.0 74 147-230 259-343 (361)
176 1xip_A Nucleoporin NUP159; bet 99.1 4.1E-09 1.4E-13 87.8 15.8 135 33-221 47-192 (388)
177 2bkl_A Prolyl endopeptidase; m 99.1 4.2E-09 1.4E-13 94.9 17.1 156 26-222 123-306 (695)
178 1qks_A Cytochrome CD1 nitrite 99.1 1.2E-07 4.2E-12 83.1 25.3 179 33-221 165-374 (567)
179 3c5m_A Oligogalacturonate lyas 99.1 5.9E-09 2E-13 86.9 16.4 180 27-221 39-274 (396)
180 2xdw_A Prolyl endopeptidase; a 99.0 1.7E-08 5.7E-13 91.2 18.8 154 28-222 129-322 (710)
181 1rwi_B Serine/threonine-protei 99.0 7.3E-08 2.5E-12 76.0 19.7 174 33-221 76-265 (270)
182 3c5m_A Oligogalacturonate lyas 99.0 6.5E-09 2.2E-13 86.6 13.3 173 31-221 88-330 (396)
183 2dg1_A DRP35, lactonase; beta 99.0 5.1E-08 1.7E-12 79.5 18.1 145 33-221 54-214 (333)
184 2xdw_A Prolyl endopeptidase; a 98.9 1.8E-07 6E-12 84.5 21.2 184 29-222 176-416 (710)
185 2gop_A Trilobed protease; beta 98.9 1.2E-07 4E-12 77.7 18.2 166 29-220 64-291 (347)
186 1rwi_B Serine/threonine-protei 98.9 2E-07 6.7E-12 73.5 18.9 176 32-221 32-223 (270)
187 2gop_A Trilobed protease; beta 98.9 2.4E-07 8.1E-12 75.9 19.7 167 29-219 109-330 (347)
188 3no2_A Uncharacterized protein 98.9 1E-06 3.5E-11 70.2 21.4 177 27-222 40-253 (276)
189 1xip_A Nucleoporin NUP159; bet 98.9 4.6E-08 1.6E-12 81.4 13.7 121 34-206 96-230 (388)
190 1qks_A Cytochrome CD1 nitrite 98.8 2.1E-06 7.2E-11 75.3 24.5 192 28-233 201-438 (567)
191 3e5z_A Putative gluconolactona 98.8 7.9E-07 2.7E-11 71.2 20.3 175 31-220 76-286 (296)
192 2dg1_A DRP35, lactonase; beta 98.8 9.1E-08 3.1E-12 78.0 14.6 133 32-209 14-154 (333)
193 2bkl_A Prolyl endopeptidase; m 98.8 3E-08 1E-12 89.3 12.3 154 30-227 74-267 (695)
194 3dsm_A Uncharacterized protein 98.8 9.3E-07 3.2E-11 72.2 18.7 169 34-221 53-254 (328)
195 1yr2_A Prolyl oligopeptidase; 98.8 4.9E-07 1.7E-11 82.1 18.1 161 28-227 167-358 (741)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.6E-06 5.4E-11 69.8 18.2 151 32-221 125-300 (314)
197 3dsm_A Uncharacterized protein 98.6 7.9E-06 2.7E-10 66.6 19.9 176 33-219 93-301 (328)
198 2z2n_A Virginiamycin B lyase; 98.6 1.8E-05 6.2E-10 62.9 21.0 147 27-218 18-169 (299)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 2.1E-05 7.1E-10 63.1 21.4 173 33-221 27-257 (314)
200 1yr2_A Prolyl oligopeptidase; 98.6 6.6E-06 2.3E-10 74.6 19.9 182 28-221 213-442 (741)
201 3g4e_A Regucalcin; six bladed 98.5 7E-05 2.4E-09 60.0 23.1 171 34-221 24-230 (297)
202 2z2n_A Virginiamycin B lyase; 98.5 2.8E-05 9.5E-10 61.8 20.4 142 33-219 108-254 (299)
203 2oiz_A Aromatic amine dehydrog 98.5 4.4E-06 1.5E-10 69.1 15.9 126 33-202 209-360 (361)
204 3hrp_A Uncharacterized protein 98.5 4.8E-05 1.6E-09 64.0 22.3 172 30-218 177-408 (409)
205 2hz6_A Endoplasmic reticulum t 98.5 1.6E-07 5.3E-12 78.2 6.4 169 30-222 4-194 (369)
206 3hrp_A Uncharacterized protein 98.5 2.1E-05 7.1E-10 66.3 19.3 177 33-221 140-355 (409)
207 3dr2_A Exported gluconolactona 98.5 1.3E-05 4.4E-10 64.5 16.9 144 33-221 54-225 (305)
208 2qc5_A Streptogramin B lactona 98.5 0.00016 5.6E-09 57.3 23.2 173 32-219 70-259 (300)
209 2mad_H Methylamine dehydrogena 98.4 0.00024 8.3E-09 58.9 23.3 74 146-229 271-356 (373)
210 3iuj_A Prolyl endopeptidase; h 98.4 1.6E-05 5.4E-10 71.6 17.2 158 29-226 134-322 (693)
211 3g4e_A Regucalcin; six bladed 98.4 0.00042 1.4E-08 55.4 23.9 170 30-209 60-261 (297)
212 2qc5_A Streptogramin B lactona 98.3 0.00017 5.9E-09 57.1 20.0 145 29-218 25-174 (300)
213 3sjl_D Methylamine dehydrogena 98.3 4.7E-05 1.6E-09 63.2 16.6 60 167-232 311-372 (386)
214 2ghs_A AGR_C_1268P; regucalcin 98.3 0.00052 1.8E-08 55.7 22.2 168 35-219 61-259 (326)
215 3c75_H MADH, methylamine dehyd 98.2 6.3E-05 2.1E-09 63.4 16.2 74 147-230 324-409 (426)
216 3iuj_A Prolyl endopeptidase; h 98.1 0.00013 4.6E-09 65.6 16.0 186 28-228 179-412 (693)
217 3sjl_D Methylamine dehydrogena 98.1 0.00027 9.1E-09 58.7 16.4 151 28-221 37-209 (386)
218 2qe8_A Uncharacterized protein 98.1 0.00013 4.6E-09 59.7 14.5 152 32-218 25-222 (343)
219 2ghs_A AGR_C_1268P; regucalcin 98.0 0.00083 2.8E-08 54.5 18.6 108 67-209 181-291 (326)
220 2ece_A 462AA long hypothetical 98.0 0.00082 2.8E-08 56.6 17.8 161 30-231 144-363 (462)
221 3dr2_A Exported gluconolactona 98.0 0.00072 2.4E-08 54.2 17.1 133 32-211 139-298 (305)
222 1mda_H Methylamine dehydrogena 97.9 0.00038 1.3E-08 57.6 15.2 78 147-234 269-357 (368)
223 2mad_H Methylamine dehydrogena 97.8 0.0031 1.1E-07 52.2 18.8 146 30-221 27-196 (373)
224 2ece_A 462AA long hypothetical 97.7 0.0031 1.1E-07 53.2 16.8 152 33-231 93-299 (462)
225 2iwa_A Glutamine cyclotransfer 97.7 0.0053 1.8E-07 48.2 16.6 150 67-232 23-190 (266)
226 1kb0_A Quinohemoprotein alcoho 97.6 0.01 3.4E-07 53.3 19.5 59 167-231 457-515 (677)
227 2qe8_A Uncharacterized protein 97.4 0.0069 2.4E-07 49.3 15.2 122 67-221 19-155 (343)
228 3nok_A Glutaminyl cyclase; bet 97.4 0.021 7.2E-07 44.6 16.7 148 34-233 64-220 (268)
229 1fwx_A Nitrous oxide reductase 97.3 0.013 4.4E-07 51.2 15.8 86 143-233 278-381 (595)
230 2xe4_A Oligopeptidase B; hydro 97.3 0.0055 1.9E-07 55.7 14.1 157 30-226 180-360 (751)
231 3nol_A Glutamine cyclotransfer 97.3 0.023 7.9E-07 44.3 15.6 161 53-232 34-210 (262)
232 3nol_A Glutamine cyclotransfer 97.2 0.047 1.6E-06 42.6 18.7 163 34-209 52-244 (262)
233 3c75_H MADH, methylamine dehyd 97.2 0.0052 1.8E-07 51.7 12.1 77 146-231 122-217 (426)
234 3tc9_A Hypothetical hydrolase; 97.2 0.025 8.5E-07 47.7 16.2 73 144-220 228-301 (430)
235 3hxj_A Pyrrolo-quinoline quino 97.1 0.039 1.3E-06 44.0 16.5 164 34-220 147-324 (330)
236 2hz6_A Endoplasmic reticulum t 97.1 5.4E-05 1.9E-09 62.8 -0.9 103 75-221 8-112 (369)
237 1yiq_A Quinohemoprotein alcoho 97.1 0.024 8.1E-07 51.0 16.2 54 166-222 454-507 (689)
238 2iwa_A Glutamine cyclotransfer 97.0 0.083 2.8E-06 41.4 20.7 173 33-220 30-237 (266)
239 3hxj_A Pyrrolo-quinoline quino 97.0 0.016 5.3E-07 46.4 12.8 27 190-217 215-241 (330)
240 1npe_A Nidogen, entactin; glyc 96.9 0.092 3.1E-06 40.8 19.2 143 34-220 47-198 (267)
241 1kb0_A Quinohemoprotein alcoho 96.9 0.018 6.3E-07 51.6 13.8 72 142-219 477-566 (677)
242 2fp8_A Strictosidine synthase; 96.9 0.041 1.4E-06 44.2 14.6 148 33-220 28-216 (322)
243 1npe_A Nidogen, entactin; glyc 96.9 0.11 3.6E-06 40.4 19.5 147 35-231 91-246 (267)
244 2xe4_A Oligopeptidase B; hydro 96.8 0.015 5E-07 52.9 12.1 114 67-221 176-305 (751)
245 1k3i_A Galactose oxidase precu 96.8 0.096 3.3E-06 46.7 17.3 80 145-230 402-506 (656)
246 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.072 2.5E-06 43.6 15.3 148 29-222 47-209 (376)
247 2xbg_A YCF48-like protein; pho 96.7 0.17 5.9E-06 40.8 16.9 150 32-227 130-285 (327)
248 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.11 3.9E-06 42.4 15.3 136 31-217 235-375 (376)
249 3mbr_X Glutamine cyclotransfer 96.5 0.2 6.8E-06 38.6 18.5 150 67-232 23-188 (243)
250 1yiq_A Quinohemoprotein alcoho 96.4 0.13 4.6E-06 46.1 15.8 73 146-222 239-340 (689)
251 3nok_A Glutaminyl cyclase; bet 96.4 0.058 2E-06 42.1 11.6 109 67-221 57-165 (268)
252 4hw6_A Hypothetical protein, I 96.4 0.17 5.7E-06 42.7 15.3 75 143-220 229-304 (433)
253 2p4o_A Hypothetical protein; p 96.4 0.28 9.5E-06 39.0 19.7 173 33-219 41-241 (306)
254 2fp8_A Strictosidine synthase; 96.3 0.15 5E-06 40.9 14.0 112 67-220 187-313 (322)
255 1mda_H Methylamine dehydrogena 96.2 0.019 6.4E-07 47.4 8.1 81 132-220 57-158 (368)
256 2p9w_A MAL S 1 allergenic prot 96.1 0.3 1E-05 39.4 14.7 73 143-220 138-215 (334)
257 1kv9_A Type II quinohemoprotei 96.0 0.17 5.7E-06 45.3 14.0 55 165-222 436-490 (668)
258 1k3i_A Galactose oxidase precu 95.9 0.14 4.7E-06 45.7 12.9 79 143-227 244-329 (656)
259 3mbr_X Glutamine cyclotransfer 95.8 0.46 1.6E-05 36.6 19.7 162 34-208 30-222 (243)
260 1fwx_A Nitrous oxide reductase 95.8 0.19 6.6E-06 43.9 13.0 52 168-221 255-309 (595)
261 3pbp_A Nucleoporin NUP82; beta 95.7 0.76 2.6E-05 38.5 18.6 136 66-221 67-213 (452)
262 3kya_A Putative phosphatase; s 95.6 0.81 2.8E-05 39.2 16.1 73 145-220 250-341 (496)
263 3sre_A PON1, serum paraoxonase 95.6 0.74 2.5E-05 37.6 19.4 86 132-226 154-258 (355)
264 3v65_B Low-density lipoprotein 95.6 0.8 2.7E-05 37.8 21.2 74 142-220 202-277 (386)
265 3v64_C Agrin; beta propeller, 95.6 0.75 2.6E-05 37.4 19.9 74 142-220 159-234 (349)
266 1kv9_A Type II quinohemoprotei 95.3 1.4 4.7E-05 39.4 17.1 74 145-222 233-335 (668)
267 2xbg_A YCF48-like protein; pho 95.3 0.85 2.9E-05 36.6 14.6 143 31-217 170-319 (327)
268 3v64_C Agrin; beta propeller, 95.2 1 3.5E-05 36.5 18.8 79 142-226 203-281 (349)
269 3v65_B Low-density lipoprotein 95.1 1.2 4E-05 36.8 19.3 79 142-226 246-324 (386)
270 3qqz_A Putative uncharacterize 95.0 0.95 3.3E-05 35.1 19.5 155 33-217 79-250 (255)
271 2vpj_A Kelch-like protein 12; 94.7 1.2 4E-05 35.0 16.4 73 157-232 207-289 (301)
272 3qqz_A Putative uncharacterize 94.5 1.2 4.2E-05 34.4 13.3 84 135-223 20-103 (255)
273 1n7d_A LDL receptor, low-densi 94.3 0.34 1.1E-05 43.6 10.6 81 142-231 540-622 (699)
274 2p4o_A Hypothetical protein; p 94.1 1.7 5.8E-05 34.3 14.7 112 67-220 34-147 (306)
275 3ii7_A Kelch-like protein 7; p 94.0 1.8 6E-05 34.1 15.8 74 157-233 201-284 (306)
276 2xn4_A Kelch-like protein 2; s 93.9 1.8 6.2E-05 33.9 13.6 69 157-228 205-283 (302)
277 1ijq_A LDL receptor, low-densi 93.7 2.1 7.3E-05 34.0 19.7 74 142-220 120-195 (316)
278 1ijq_A LDL receptor, low-densi 93.7 2.1 7.3E-05 34.0 20.9 79 142-226 164-244 (316)
279 3pbp_A Nucleoporin NUP82; beta 93.7 1.5 5.2E-05 36.7 12.4 73 143-220 67-158 (452)
280 2ad6_A Methanol dehydrogenase 93.5 0.67 2.3E-05 40.6 10.8 55 165-222 442-496 (571)
281 3m0c_C LDL receptor, low-densi 93.2 4.8 0.00017 36.7 21.2 74 142-220 514-589 (791)
282 3sov_A LRP-6, low-density lipo 93.1 2.8 9.6E-05 33.5 16.8 74 142-220 122-197 (318)
283 1w6s_A Methanol dehydrogenase 93.0 4.4 0.00015 35.6 17.7 55 165-222 451-505 (599)
284 3sre_A PON1, serum paraoxonase 92.8 3.3 0.00011 33.8 16.2 73 142-219 221-297 (355)
285 3tc9_A Hypothetical hydrolase; 92.7 2.1 7E-05 35.9 12.3 75 140-220 177-257 (430)
286 3p5b_L Low density lipoprotein 92.3 4.1 0.00014 33.7 20.8 77 142-224 246-324 (400)
287 1flg_A Protein (quinoprotein e 92.2 2.9 9.8E-05 36.7 12.9 60 166-231 465-524 (582)
288 3p5b_L Low density lipoprotein 92.1 4.4 0.00015 33.5 20.8 74 142-220 202-277 (400)
289 2xn4_A Kelch-like protein 2; s 92.1 3.5 0.00012 32.2 14.4 71 157-230 156-238 (302)
290 4hw6_A Hypothetical protein, I 91.9 5 0.00017 33.6 16.9 158 34-219 239-432 (433)
291 2ad6_A Methanol dehydrogenase 91.7 2.7 9.1E-05 36.7 12.2 23 157-179 475-497 (571)
292 1zgk_A Kelch-like ECH-associat 91.6 4.1 0.00014 32.0 16.3 73 157-232 216-298 (308)
293 3sov_A LRP-6, low-density lipo 91.6 4.4 0.00015 32.3 19.6 79 142-226 166-244 (318)
294 3das_A Putative oxidoreductase 91.5 4 0.00014 33.2 12.2 109 67-208 34-158 (347)
295 1n7d_A LDL receptor, low-densi 91.5 0.95 3.3E-05 40.7 9.3 73 143-220 497-571 (699)
296 4a2l_A BT_4663, two-component 91.1 8.7 0.0003 34.8 19.1 150 33-220 319-480 (795)
297 1zgk_A Kelch-like ECH-associat 91.0 4.7 0.00016 31.7 13.9 71 157-230 169-249 (308)
298 3ii7_A Kelch-like protein 7; p 91.0 4.7 0.00016 31.6 15.0 71 157-230 150-234 (306)
299 1cru_A Protein (soluble quinop 90.9 6.6 0.00023 33.2 15.2 27 67-93 29-55 (454)
300 4a2l_A BT_4663, two-component 90.9 9 0.00031 34.7 20.9 175 33-220 366-571 (795)
301 1tl2_A L10, protein (tachylect 90.9 2.4 8.2E-05 32.1 9.4 63 144-214 90-157 (236)
302 4asc_A Kelch repeat and BTB do 90.8 5.1 0.00017 31.6 14.3 68 157-227 197-283 (315)
303 3amr_A 3-phytase; beta-propell 90.7 5.9 0.0002 32.2 21.7 153 44-231 98-272 (355)
304 3a9g_A Putative uncharacterize 89.8 7 0.00024 31.7 14.1 109 67-208 31-153 (354)
305 2p9w_A MAL S 1 allergenic prot 89.3 7.5 0.00026 31.3 12.2 114 67-218 15-166 (334)
306 1flg_A Protein (quinoprotein e 89.1 10 0.00036 33.1 13.7 51 157-209 497-549 (582)
307 3v9f_A Two-component system se 88.6 14 0.00047 33.5 16.4 73 141-220 449-524 (781)
308 2ism_A Putative oxidoreductase 88.6 8.6 0.00029 31.1 15.0 106 67-208 33-153 (352)
309 2woz_A Kelch repeat and BTB do 87.0 9.7 0.00033 29.9 12.8 68 157-227 207-293 (318)
310 2uvk_A YJHT; unknown function, 86.9 11 0.00036 30.3 12.7 21 212-233 286-306 (357)
311 4asc_A Kelch repeat and BTB do 86.4 10 0.00036 29.7 13.8 71 157-230 149-230 (315)
312 3m0c_C LDL receptor, low-densi 86.3 20 0.00067 32.8 20.9 77 141-224 557-636 (791)
313 2zwa_A Leucine carboxyl methyl 86.1 19 0.00063 32.3 15.0 76 146-225 543-639 (695)
314 2vpj_A Kelch-like protein 12; 85.7 11 0.00037 29.3 16.1 71 157-230 160-240 (301)
315 2zwa_A Leucine carboxyl methyl 82.5 27 0.00091 31.3 15.6 72 157-229 501-591 (695)
316 1tl2_A L10, protein (tachylect 81.6 2.5 8.6E-05 32.0 5.1 68 142-218 41-114 (236)
317 2woz_A Kelch repeat and BTB do 81.0 18 0.00062 28.3 13.6 72 156-230 158-240 (318)
318 3v9f_A Two-component system se 80.8 32 0.0011 31.0 15.2 71 141-220 494-568 (781)
319 4a0p_A LRP6, LRP-6, low-densit 79.2 33 0.0011 30.3 19.1 73 142-220 123-197 (628)
320 4gq2_M Nucleoporin NUP120; bet 77.1 41 0.0014 31.4 12.8 38 191-231 237-274 (950)
321 2wg3_C Hedgehog-interacting pr 75.9 27 0.00092 29.5 10.4 27 67-93 16-43 (463)
322 3s94_A LRP-6, low-density lipo 75.9 41 0.0014 29.6 18.3 73 142-219 127-201 (619)
323 3kya_A Putative phosphatase; s 75.5 24 0.00081 30.2 9.9 78 143-224 140-234 (496)
324 1w6s_A Methanol dehydrogenase 75.2 42 0.0015 29.4 14.7 55 167-222 278-344 (599)
325 4a0p_A LRP6, LRP-6, low-densit 73.7 48 0.0016 29.3 19.6 77 141-224 165-241 (628)
326 4gq2_M Nucleoporin NUP120; bet 72.8 7.3 0.00025 36.4 6.7 36 67-105 238-273 (950)
327 4fhn_B Nucleoporin NUP120; pro 72.7 5.8 0.0002 37.8 6.1 36 67-105 240-275 (1139)
328 1cru_A Protein (soluble quinop 68.2 53 0.0018 27.6 10.8 55 142-200 27-87 (454)
329 3amr_A 3-phytase; beta-propell 68.2 47 0.0016 27.0 18.9 161 33-230 38-222 (355)
330 3ei3_A DNA damage-binding prot 67.4 90 0.0031 29.9 21.1 162 43-220 401-591 (1158)
331 4fhn_B Nucleoporin NUP120; pro 66.1 19 0.00065 34.4 8.0 39 191-232 239-277 (1139)
332 3f7f_A Nucleoporin NUP120; nuc 64.2 50 0.0017 29.7 9.7 37 191-232 223-259 (729)
333 3a9g_A Putative uncharacterize 64.0 55 0.0019 26.3 10.3 73 141-220 28-114 (354)
334 3f7f_A Nucleoporin NUP120; nuc 59.6 22 0.00077 31.9 6.7 34 67-105 224-257 (729)
335 2ism_A Putative oxidoreductase 58.9 68 0.0023 25.7 11.2 72 142-220 31-114 (352)
336 3s94_A LRP-6, low-density lipo 57.2 1E+02 0.0035 27.1 19.8 74 142-220 435-510 (619)
337 3sbq_A Nitrous-oxide reductase 54.0 61 0.0021 28.4 8.2 72 144-220 325-408 (638)
338 1sqj_A OXG-RCBH, oligoxylogluc 52.9 1.2E+02 0.0039 27.7 10.5 84 141-228 14-108 (789)
339 3b7f_A Glycosyl hydrolase, BNR 51.3 95 0.0033 25.0 11.6 80 142-227 115-214 (394)
340 2g8s_A Glucose/sorbosone dehyd 50.1 82 0.0028 25.2 8.3 73 142-220 18-107 (353)
341 3ei3_A DNA damage-binding prot 50.0 1.8E+02 0.0062 27.9 21.9 78 141-219 553-635 (1158)
342 3das_A Putative oxidoreductase 43.6 1.3E+02 0.0044 24.3 12.3 82 135-220 25-116 (347)
343 3zwu_A Alkaline phosphatase PH 39.9 1.3E+02 0.0045 26.4 8.3 57 145-207 479-548 (592)
344 2uvk_A YJHT; unknown function, 32.9 1.8E+02 0.0061 22.8 10.1 20 211-231 168-187 (357)
345 2cn3_A Xyloglucanase, beta-1,4 32.0 2.8E+02 0.0096 24.8 12.9 84 142-229 72-172 (737)
346 3s25_A Hypothetical 7-bladed b 31.7 1.8E+02 0.0063 22.6 13.5 62 148-219 151-213 (302)
347 2be1_A Serine/threonine-protei 27.2 2.4E+02 0.0082 22.6 9.3 65 157-221 56-131 (339)
348 2cn3_A Xyloglucanase, beta-1,4 26.4 3.5E+02 0.012 24.2 10.4 82 142-228 23-119 (737)
349 1q47_A Semaphorin 3A; beta pro 26.1 2.2E+02 0.0075 24.3 7.3 59 157-215 421-487 (495)
350 2be1_A Serine/threonine-protei 25.1 1.4E+02 0.0048 24.0 5.7 63 157-221 10-77 (339)
351 3al9_A Plexin-A2; beta-propell 24.7 1.8E+02 0.0063 25.0 6.7 71 143-215 401-476 (539)
352 3a0f_A Xyloglucanase; beta-pro 24.6 3.9E+02 0.013 24.1 11.4 85 140-228 19-120 (763)
353 2xzh_A Clathrin heavy chain 1; 23.1 3E+02 0.01 22.3 24.7 176 36-221 118-333 (365)
354 4a9v_A PHOX; hydrolase, beta-p 21.3 4.2E+02 0.014 23.2 9.1 60 143-208 477-549 (592)
355 4gz8_A Semaphorin-3A; multi-do 20.9 4.2E+02 0.014 23.6 8.3 58 158-215 430-495 (667)
356 3nvq_A Semaphorin-7A; beta-pro 20.4 4.3E+02 0.015 23.1 8.1 59 158-216 381-445 (590)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.6e-28 Score=201.79 Aligned_cols=195 Identities=17% Similarity=0.169 Sum_probs=163.9
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......+++.++++++.|++|++||+ +..+..|... +.+++|+|++++|++++.|+.+++|+. .++.
T Consensus 83 v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~g~~dg~v~i~~~---~~~~ 155 (321)
T 3ow8_A 83 VVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVD----AWTLAFSPDSQYLATGTHVGKVNIFGV---ESGK 155 (321)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC----CCCEEECTTSSEEEEECTTSEEEEEET---TTCS
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCcc----EEEEEECCCCCEEEEEcCCCcEEEEEc---CCCc
Confidence 344445578999999999999999998 5667788877 899999999999999999999999998 5555
Q ss_pred eeecc-----ceeeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEE
Q psy13856 101 CLQPK-----YFKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 170 (271)
Q Consensus 101 ~~~~~-----~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~ 170 (271)
..... ......+++++++++ +.|++.+....+.+..+.+|...|.+++|+| ++.+|++|+.|+.|+
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp----d~~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP----DSQLLVTASDDGYIK 231 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT----TSCEEEEECTTSCEE
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC----CCCEEEEEcCCCeEE
Confidence 44332 224556777788887 7788832222278888999999999999999 699999999999999
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
+||++.... ...+.+|...|.+++|+|++.+|++++.|++|++||++++ +++.++.+|...
T Consensus 232 iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~h~~~ 292 (321)
T 3ow8_A 232 IYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---TCVHTFFDHQDQ 292 (321)
T ss_dssp EEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSC
T ss_pred EEECCCcce--eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---EEEEEEcCCCCc
Confidence 999998876 6788899999999999999999999999999999999877 788888777654
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.8e-28 Score=203.32 Aligned_cols=183 Identities=19% Similarity=0.111 Sum_probs=147.4
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcEEEEEeecCCCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
+......|+|++|++|+.|++|++||+ +..+.+|... |.+++|+|++. +|++++.|++|++||+ +++
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~----V~~~~~~~~~~~~l~s~s~D~~v~iwd~---~~~ 202 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ----VTCVAASPHKDSVFLSCSEDNRILLWDT---RCP 202 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECSSCTTEEEEEETTSCEEEEET---TSS
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc----eEEEEecCCCCCceeeeccccccccccc---ccc
Confidence 455556689999999999999999998 7888999999 99999999885 7899999999999999 555
Q ss_pred ceeeccc-------eeeEEEeec-cceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 100 ACLQPKY-------FKLTVYSTK-LTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 100 ~~~~~~~-------~~~~~~~~~-~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
++..... .....+... +++++ +.|++.+....+++..+.+|...|++++|+|+ ...+|++|+.|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~---g~~~lasgs~D 279 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPH---SVPFLASLSED 279 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSS---SSCCEEEEETT
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccC---CCeEEEEEeCC
Confidence 5554331 123334443 45555 78898332223778899999999999999994 34689999999
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEECCCcEEEEEeCCC
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~v~iw~~~~~ 221 (271)
++|++||.++++ ...+.+|.+.|++++|+|++. +|++++.|++|++|++.+.
T Consensus 280 ~~i~vwd~~~~~---~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 280 CSLAVLDSSLSE---LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp SCEEEECTTCCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CeEEEEECCCCc---EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 999999998876 456789999999999999975 6779999999999999754
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.1e-28 Score=197.97 Aligned_cols=209 Identities=11% Similarity=0.104 Sum_probs=164.9
Q ss_pred eeceeEeeccccccceecccCCC----CCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCe
Q psy13856 10 SCDGLLMTLKPTLEIETYTESPL----RIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNR 78 (271)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~----~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~ 78 (271)
+.-|.+......++-.++..... +++.+|++|+.|++|++|++ ...+.+|... |.+++|++++..
T Consensus 19 ~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~----v~~~~~~~~~~~ 94 (321)
T 3ow8_A 19 NQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLG----VVSVDISHTLPI 94 (321)
T ss_dssp --CEEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECSSSSE
T ss_pred hhhhheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCC----EEEEEECCCCCE
Confidence 33455544333444444444443 35789999999999999997 3457899999 999999999999
Q ss_pred EEEEeCCCcEEEEEeecCCCCceeeccc-----eeeEEEeeccceee-----eEEEE--eeCCceEEeEEecCCCcceEE
Q psy13856 79 SATSSFHEAAKHLGTVQSSSPACLQPKY-----FKLTVYSTKLTRIL-----ILVRI--CGGDKWIEETKLENHSDWVRD 146 (271)
Q Consensus 79 l~s~s~d~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~~ 146 (271)
+++++.|++|++||+ .+++++.... .....++++++.++ +.+++ ...+ .....+..|...|.+
T Consensus 95 l~s~s~D~~i~lWd~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~--~~~~~~~~~~~~v~~ 169 (321)
T 3ow8_A 95 AASSSLDAHIRLWDL---ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--KKEYSLDTRGKFILS 169 (321)
T ss_dssp EEEEETTSEEEEEET---TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC--SEEEEEECSSSCEEE
T ss_pred EEEEeCCCcEEEEEC---CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC--ceeEEecCCCceEEE
Confidence 999999999999998 6666655441 23456777788877 78888 2333 566778889999999
Q ss_pred EEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeE
Q psy13856 147 VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 226 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~ 226 (271)
++|+| ++.+|++|+.|+.|++||+++++. ...+.+|..+|++++|+|++.+|++++.|+.|++||++.. +.
T Consensus 170 ~~~sp----dg~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~---~~ 240 (321)
T 3ow8_A 170 IAYSP----DGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA---NL 240 (321)
T ss_dssp EEECT----TSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC---CE
T ss_pred EEECC----CCCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc---ce
Confidence 99999 799999999999999999998876 6778899999999999999999999999999999999876 55
Q ss_pred EEEecccchh
Q psy13856 227 ITEMGKTSEQ 236 (271)
Q Consensus 227 ~~~~~~~~~~ 236 (271)
...+.+|...
T Consensus 241 ~~~~~~h~~~ 250 (321)
T 3ow8_A 241 AGTLSGHASW 250 (321)
T ss_dssp EEEECCCSSC
T ss_pred eEEEcCCCCc
Confidence 5666666543
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.1e-27 Score=195.32 Aligned_cols=199 Identities=14% Similarity=0.159 Sum_probs=161.9
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
.+......|++++|++|+.||+|++||+ +..+..|... |.+++|+|++++|++|+.|++|++||. .++
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~d~~i~vwd~---~~~ 87 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSDDFRIRVFNY---NTG 87 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEETTSEEEEEET---TTC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECCCCEEEEEEC---CCC
Confidence 3455556679999999999999999998 6778889998 999999999999999999999999998 666
Q ss_pred ceeecc-ce----eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 100 ACLQPK-YF----KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 100 ~~~~~~-~~----~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
+++... .+ ....+++++.+++ +.|++ ...........+.+|...|.+++|+|. ++.+|++|+.|+.
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~---~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK---DPSTFASGCLDRT 164 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT---CTTEEEEEETTSE
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC---CCCEEEEEeCCCe
Confidence 666544 22 4455666677777 88888 322222566788999999999999996 6899999999999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEec--CCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchhh
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL--TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQR 237 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~--~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 237 (271)
|++||++..... .....+|...+..++|+| ++.+|++++.|++|++||++++ +++.++.+|....
T Consensus 165 v~iwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~---~~~~~~~~h~~~v 231 (304)
T 2ynn_A 165 VKVWSLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK---SCVATLEGHMSNV 231 (304)
T ss_dssp EEEEETTCSSCS-EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT---EEEEEEECCSSCE
T ss_pred EEEEECCCCCcc-ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC---ccceeeCCCCCCE
Confidence 999999876642 333456678899999987 6789999999999999999877 7778888776543
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=4.3e-28 Score=205.76 Aligned_cols=199 Identities=17% Similarity=0.237 Sum_probs=162.1
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......+++.+|++|+.|++|++||+ +..+.+|... |.+++|+|++++|++|+.|++|++||. .++.
T Consensus 153 V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~~p~~~~l~s~s~D~~i~~wd~---~~~~ 225 (410)
T 1vyh_C 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN----VSSVSIMPNGDHIVSASRDKTIKMWEV---QTGY 225 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC----EEEEEECSSSSEEEEEETTSEEEEEET---TTCC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCC----EEEEEEeCCCCEEEEEeCCCeEEEEEC---CCCc
Confidence 344445679999999999999999998 6778899999 999999999999999999999999999 7777
Q ss_pred eeecc-ce----eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCC----------------
Q psy13856 101 CLQPK-YF----KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWG---------------- 154 (271)
Q Consensus 101 ~~~~~-~~----~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~---------------- 154 (271)
++... .+ ....+..++..++ +.|++++.........+.+|...|.+++|+|...
T Consensus 226 ~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 76554 22 3344555677776 7888833222267788899999999999998410
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 155 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 155 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
..+.+|++|+.|+.|++||++++.+ ...+.+|...|.+++|+|+|.+|++++.|++|++||+.++ +++..+.+|.
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---~~~~~~~~h~ 380 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---RCMKTLNAHE 380 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---CCCEEEECCS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---ceEEEEcCCC
Confidence 0156899999999999999999876 6788899999999999999999999999999999999876 4556666665
Q ss_pred hh
Q psy13856 235 EQ 236 (271)
Q Consensus 235 ~~ 236 (271)
..
T Consensus 381 ~~ 382 (410)
T 1vyh_C 381 HF 382 (410)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=2.9e-27 Score=192.74 Aligned_cols=193 Identities=13% Similarity=0.061 Sum_probs=152.8
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC-cee
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP-ACL 102 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~-~~~ 102 (271)
....+++++|++|+.|++|++||+ +..+.+|.+. |.+++|+|++++|++|+.|++|++||. +.+ .+.
T Consensus 61 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs~D~~v~lWd~---~~~~~~~ 133 (304)
T 2ynn_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGSDDLTVKLWNW---ENNWALE 133 (304)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEETTSCEEEEEG---GGTTEEE
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCc----EEEEEEcCCCCEEEEECCCCeEEEEEC---CCCcchh
Confidence 344578999999999999999998 6778899999 999999999999999999999999998 444 222
Q ss_pred ecc-ce----eeEEEee-ccceee-----eEEEEeeCCceEEe-EEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEE
Q psy13856 103 QPK-YF----KLTVYST-KLTRIL-----ILVRICGGDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 170 (271)
Q Consensus 103 ~~~-~~----~~~~~~~-~~~~l~-----~~v~i~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~ 170 (271)
... .+ ....+++ ++..++ +.|++++-...... ....+|...+..+.|+|.. ++.+|++|+.|+.|+
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP--DKPYMITASDDLTIK 211 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCST--TCCEEEEEETTSEEE
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcC--CCCEEEEEcCCCeEE
Confidence 222 22 3344554 355666 88888322111222 3334567889999998742 578999999999999
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
+||++++.+ ...+.+|...|.+++|+|++.+|++++.|++|++||+++. +....+..+..
T Consensus 212 iWd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~---~~~~~~~~~~~ 271 (304)
T 2ynn_A 212 IWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLNVGLE 271 (304)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---CEEEEECCSSS
T ss_pred EEeCCCCcc--ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC---ceeeeccCCCc
Confidence 999999876 7788999999999999999999999999999999999876 66677766543
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=198.57 Aligned_cols=184 Identities=21% Similarity=0.299 Sum_probs=151.3
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc--------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST--------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQS 96 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~--------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~ 96 (271)
..+.....|+|++||+|+.|++|++||. .....+|... |.+++|+|++++|++|+.|+++++|+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~----v~~~~~sp~g~~l~s~s~D~~v~iw~~--- 90 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT----VRKVAWSPCGNYLASASFDATTCIWKK--- 90 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSC----EEEEEECTTSSEEEEEETTSCEEEEEE---
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCc----EEEEEECCCCCEEEEEECCCcEEEEEc---
Confidence 4555666779999999999999999998 1123689998 999999999999999999999999998
Q ss_pred CCC--ceeecc-c----eeeEEEeeccceee-----eEEEE--ee-CCceEEeEEecCCCcceEEEEEccCCCCCCcEEE
Q psy13856 97 SSP--ACLQPK-Y----FKLTVYSTKLTRIL-----ILVRI--CG-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 97 ~~~--~~~~~~-~----~~~~~~~~~~~~l~-----~~v~i--~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
..+ .+.... . .....+++++++++ +.|++ .. ......+..+.+|...|.+++|+| ++.+|+
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p----~~~~l~ 166 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP----SQELLA 166 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS----SSSCEE
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC----CCCEEE
Confidence 433 233332 2 24455667788887 77888 22 233456778899999999999999 699999
Q ss_pred EEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+|+.|+.|++||.+.........+.+|...|++++|+|+|.+|++++.|++|+||+..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 9999999999999887543356788999999999999999999999999999999974
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.9e-27 Score=194.07 Aligned_cols=193 Identities=13% Similarity=0.165 Sum_probs=155.4
Q ss_pred ecccCCCCC-CCEEEEccCCCeEEeccc----------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEee
Q psy13856 26 TYTESPLRI-GHTLISCDTQAHIGIRST----------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTV 94 (271)
Q Consensus 26 ~~~~~~~~~-g~~l~s~s~d~~i~lwd~----------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~ 94 (271)
+......++ +++|++|+.|++|++|++ +..+.+|... |.+++|+|++++|++|+.|++|++||.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~----v~~~~~s~dg~~l~s~s~D~~v~~wd~- 94 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI----VQDCTLTADGAYALSASWDKTLRLWDV- 94 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSC----EEEEEECTTSSEEEEEETTSEEEEEET-
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCccc----EEEEEECCCCCEEEEEeCCCEEEEEEC-
Confidence 344444454 479999999999999987 4567899999 999999999999999999999999999
Q ss_pred cCCCCceeecc-ce----eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCC--CCCcEEE
Q psy13856 95 QSSSPACLQPK-YF----KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWG--LSKCMIA 161 (271)
Q Consensus 95 ~~~~~~~~~~~-~~----~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~~~~l~ 161 (271)
.+++++... .+ ....+..++..++ +.|++ ...+ ..+..+.+|...|.++.|.|... .++.+++
T Consensus 95 --~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 95 --ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp --TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC------CCEEE
T ss_pred --CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEE
Confidence 777766554 22 3334555567776 78888 4444 57788899999999999998421 1345899
Q ss_pred EEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
+++.|+.|++||+++... ...+.+|...|++++|+|+|.+|++++.|++|++||+... +.+..+..
T Consensus 171 s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~ 236 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK---KAMYTLSA 236 (319)
T ss_dssp EEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT---EEEEEEEC
T ss_pred EEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEecC
Confidence 999999999999998775 6678899999999999999999999999999999999876 45555543
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.1e-27 Score=201.52 Aligned_cols=195 Identities=17% Similarity=0.213 Sum_probs=163.8
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......|++.+|++|+.|++|++||+ ...+.+|.+. |.+++|+|++++|++|+.|++|++||. ...+
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~----V~~v~~~~~~~~l~sgs~D~~i~iwd~---~~~~ 183 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS----VQDISFDHSGKLLASCSADMTIKLWDF---QGFE 183 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSC----EEEEEECTTSSEEEEEETTSCCCEEET---TSSC
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCc----EEEEEEcCCCCEEEEEeCCCeEEEEeC---CCCc
Confidence 344445678999999999999999998 6788999999 999999999999999999999999998 6666
Q ss_pred eeecc-c----eeeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEE
Q psy13856 101 CLQPK-Y----FKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 170 (271)
Q Consensus 101 ~~~~~-~----~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~ 170 (271)
++... . .....+.++++.++ +.|++++-..-.++..+.+|...|.++.++| ++.+|++|+.|+.|+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~----~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ----DGTLIASCSNDQTVR 259 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT----TSSEEEEEETTSCEE
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC----CCCEEEEEcCCCeEE
Confidence 66554 2 24445566677776 8888833222267888999999999999999 699999999999999
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecC--------------------CCEEEEEECCCcEEEEEeCCCCceeEEEEe
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLT--------------------GDILTVSCGDNSVSLWKENTDGAWQCITEM 230 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~--------------------g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 230 (271)
+||++++.+ ...+.+|...|.+++|+|+ |.+|++|+.|++|++||++++ .++..+
T Consensus 260 vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~---~~~~~~ 334 (410)
T 1vyh_C 260 VWVVATKEC--KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG---MCLMTL 334 (410)
T ss_dssp EEETTTCCE--EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT---EEEEEE
T ss_pred EEECCCCce--eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC---ceEEEE
Confidence 999998876 6778899999999999996 678999999999999999877 667777
Q ss_pred cccchh
Q psy13856 231 GKTSEQ 236 (271)
Q Consensus 231 ~~~~~~ 236 (271)
.+|...
T Consensus 335 ~~h~~~ 340 (410)
T 1vyh_C 335 VGHDNW 340 (410)
T ss_dssp ECCSSC
T ss_pred ECCCCc
Confidence 766543
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=9.5e-28 Score=200.03 Aligned_cols=185 Identities=15% Similarity=0.050 Sum_probs=146.3
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcEEEEEeecCCCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
+......|+|++|++|+.|+.|++||. +..+.+|... |.+++|+|++. .+++++.|++|++||. +++
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~----v~~v~~s~~~~~~~~s~~~dg~v~~wd~---~~~ 214 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE----VNCVAACPGKDTIFLSCGEDGRILLWDT---RKP 214 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTCSSCEEEEETTSCEEECCT---TSS
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC----EEEEEEccCCCceeeeeccCCceEEEEC---CCC
Confidence 445556689999999999999999998 6778899999 99999999875 7899999999999998 444
Q ss_pred ceeecc---c----eeeEEEeec-cceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 100 ACLQPK---Y----FKLTVYSTK-LTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 100 ~~~~~~---~----~~~~~~~~~-~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
+..... . .....++++ +.+++ +.|++.+....+....+.+|...|++++|+|. ++.+|++|+.|
T Consensus 215 ~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~---~~~~lasgs~D 291 (357)
T 4g56_B 215 KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH---SSPFLASISED 291 (357)
T ss_dssp SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSS---SSCCEEEEETT
T ss_pred ceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCC---CCCEEEEEeCC
Confidence 443322 1 133445554 44555 67888322222677888999999999999995 45789999999
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEec-CCCEEEEEECCCcEEEEEeCCCCc
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGA 223 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~v~iw~~~~~~~ 223 (271)
++|++||+++++. ....+|.+.|++++|+| ++.+|++++.|++|++|++...++
T Consensus 292 ~~i~iwd~~~~~~---~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 292 CTVAVLDADFSEV---FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp SCEEEECTTSCEE---EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred CEEEEEECCCCcE---eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 9999999998774 34458999999999998 799999999999999999976543
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=1e-26 Score=196.16 Aligned_cols=197 Identities=16% Similarity=0.137 Sum_probs=154.7
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......|+|++|++|+.|+.|++||+ +..+.+|... |.+++|+|++++|++++.|++|++||+ .++++
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~~~l~s~s~d~~v~iwd~---~~~~~ 199 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSGDKLVSGSGDRTVRIWDL---RTGQC 199 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TTTEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCCCEEEEecCCCcEEEEEC---CCCee
Confidence 34455679999999999999999998 6778899999 999999999999999999999999998 66666
Q ss_pred eeccc----eeeEEEee-ccceee-----eEEEEeeCCceEEeEEe-------cCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 102 LQPKY----FKLTVYST-KLTRIL-----ILVRICGGDKWIEETKL-------ENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 102 ~~~~~----~~~~~~~~-~~~~l~-----~~v~i~~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
..... .....++. ++++++ +.|++.+...-..+..+ .+|...|.+++|+| ++.+|++|+
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~----~g~~l~s~s 275 (393)
T 1erj_A 200 SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR----DGQSVVSGS 275 (393)
T ss_dssp EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC----CCCEEEEEe
Confidence 54442 23344444 566776 77888322111344444 57999999999999 699999999
Q ss_pred CCCeEEEEEcCCCce----------eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 165 QDRKVIIWTSNDYVT----------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~----------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
.|+.|++||+++... .....+.+|...|.+++|+|++.+|++++.|+.|++||+.++ +.+..+.+|.
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~---~~~~~l~~h~ 352 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG---NPLLMLQGHR 352 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC---CEEEEEECCS
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC---eEEEEECCCC
Confidence 999999999976321 113456789999999999999999999999999999999877 5667777776
Q ss_pred hhh
Q psy13856 235 EQR 237 (271)
Q Consensus 235 ~~~ 237 (271)
...
T Consensus 353 ~~v 355 (393)
T 1erj_A 353 NSV 355 (393)
T ss_dssp SCE
T ss_pred CCE
Confidence 543
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=196.73 Aligned_cols=191 Identities=7% Similarity=0.010 Sum_probs=146.4
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
....++ ..|++|+.||+|+|||+ ...+.+|.+. |++++|+|++++|++|+.|++|++||+ .++
T Consensus 88 ~~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~----V~~v~~spdg~~l~sgs~d~~i~iwd~---~~~ 159 (344)
T 4gqb_B 88 LTWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDI----VSTVSVLSSGTQAVSGSKDICIKVWDL---AQQ 159 (344)
T ss_dssp EEEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSC----EEEEEECTTSSEEEEEETTSCEEEEET---TTT
T ss_pred EEEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCC----EEEEEECCCCCEEEEEeCCCeEEEEEC---CCC
Confidence 334455 46889999999999998 1234589999 999999999999999999999999999 777
Q ss_pred ceeecc-ce----eeEEEeeccc-eee-----eEEEEeeCCceEEeEEe--cCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 100 ACLQPK-YF----KLTVYSTKLT-RIL-----ILVRICGGDKWIEETKL--ENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 100 ~~~~~~-~~----~~~~~~~~~~-~l~-----~~v~i~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
+++... .+ ....++.++. .++ +.|++++....+....+ ..|...+.+++|+|. ++.+|++|+.|
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~l~sg~~d 236 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ---QSEVFVFGDEN 236 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS---CTTEEEEEETT
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCC---CCcceEEeccC
Confidence 777665 22 3344555554 444 77888322211444444 345667999999996 68899999999
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCC-CEEEEEECCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
|.|++||++++++ ...+.+|...|++++|+|++ .+|++|+.|++|+|||++++ + +.++.+|...
T Consensus 237 g~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---~-~~~~~~H~~~ 301 (344)
T 4gqb_B 237 GTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---E-LFRSQAHRDF 301 (344)
T ss_dssp SEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---E-EEEECCCSSC
T ss_pred CcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---c-EEEEcCCCCC
Confidence 9999999999886 77889999999999999997 68999999999999999865 3 3456676654
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=1.2e-26 Score=191.93 Aligned_cols=188 Identities=11% Similarity=0.100 Sum_probs=150.9
Q ss_pred ceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 24 IETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 24 ~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
-.++.....|++++|++|+.|++|++||. +..+..|... |.+++|+|++++|++|+.|+.+++|+......
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSW----VMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSC----EEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCcc----EEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 34455555679999999999999999998 6677889998 99999999999999999999999999832111
Q ss_pred C-ceeecc-ce----eeEEEeeccceee----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 99 P-ACLQPK-YF----KLTVYSTKLTRIL----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 99 ~-~~~~~~-~~----~~~~~~~~~~~l~----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
. ...... .+ ....+..++..+. +.|++++.........+.+|.+.|.+++|+| ++.++++|+.|+.
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~sg~~d~~ 207 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP----DTRLFVSGACDAS 207 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT----TSSEEEEEETTSC
T ss_pred cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC----CCCEEEEEeCCCc
Confidence 1 111111 11 2233444444333 7788833222277888999999999999999 6999999999999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|++||++++.. ...+.+|...|++++|+|++.+|++++.|++|++||++.+
T Consensus 208 v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 208 AKLWDVREGMC--RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EEEEETTTCSE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEEECCCCee--EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 99999998876 6788899999999999999999999999999999999876
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=192.61 Aligned_cols=188 Identities=24% Similarity=0.288 Sum_probs=142.7
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
+......|+|++|++|+.|++|++|+. +..+.+|... |.+++|+|++++|++|+.|++|++||+.....
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~----v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE----VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC----ceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 444555679999999999999999987 4677899999 99999999999999999999999999843222
Q ss_pred Cceeecc-----ceeeEEEeeccceee-----eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 99 PACLQPK-----YFKLTVYSTKLTRIL-----ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 99 ~~~~~~~-----~~~~~~~~~~~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
..++... ......++++++.++ +.|++ ...+.+.+...+.+|...|.+++|+| ++.+|++|+.|
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp----~g~~l~s~s~D 215 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP----SGQRLASCSDD 215 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT----TSSEEEEEETT
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC----CCCEEEEEeCC
Confidence 2333322 224456677787777 77888 44554566788999999999999999 69999999999
Q ss_pred CeEEEEEcCCCce--------------------------------------------------e---------------e
Q psy13856 167 RKVIIWTSNDYVT--------------------------------------------------W---------------T 181 (271)
Q Consensus 167 g~i~iwd~~~~~~--------------------------------------------------~---------------~ 181 (271)
++|++|+...... | .
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 9999998632100 0 0
Q ss_pred eeeeccCCCCeEEEEEecCC-CEEEEEECCCcEEEEEeCCC
Q psy13856 182 PFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~v~iw~~~~~ 221 (271)
.....+|...|++++|+|++ .+|++|+.||+|++|++...
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 00123577788888888876 47888888888888887765
No 15
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=5.5e-27 Score=195.99 Aligned_cols=190 Identities=12% Similarity=0.041 Sum_probs=136.2
Q ss_pred cCCCCCCCEEE--EccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 29 ESPLRIGHTLI--SCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 29 ~~~~~~g~~l~--s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
....|||++++ +++.|++|++||+ +..+ .|... |.+++|+|||+++++++.++ +++|+. .++..
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~----V~~v~fspdg~~l~s~s~~~-~~~~~~---~~~~~ 209 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGE----VKDLHFSTDGKVVAYITGSS-LEVIST---VTGSC 209 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSC----CCEEEECTTSSEEEEECSSC-EEEEET---TTCCE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCc----eEEEEEccCCceEEecccee-EEEEEe---ccCcc
Confidence 33457999865 5668999999999 3334 46677 99999999999999998665 557776 44444
Q ss_pred eecc-------ceeeEEEeeccceee-----e----EEEE--eeCCc--eEEeEEecCCCcceEEEEEccCCCCCCcEEE
Q psy13856 102 LQPK-------YFKLTVYSTKLTRIL-----I----LVRI--CGGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 102 ~~~~-------~~~~~~~~~~~~~l~-----~----~v~i--~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
.... ......++++++.++ + .+++ ..... ......+.+|...|++++|+| ++.+||
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp----dg~~la 285 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM----KGELAV 285 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT----TSCEEE
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC----CCCceE
Confidence 3221 124455677777766 1 3333 22221 123456788999999999999 799999
Q ss_pred EEeCCCeEEEEEcCCCceeeeee-eccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC-----ceeEEEEeccc
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG-----AWQCITEMGKT 233 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~-~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~~~ 233 (271)
+|+.|++|+|||+++++. ... +.+|..+|++|+|+|||++|+++|.|++|+||++..+- .++.+.+++.|
T Consensus 286 sgs~D~~V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~~~~s~~~~l~kl~~~ 361 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNYANYTSMKQKISKLEHH 361 (365)
T ss_dssp EEETTSCEEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTTC--------------
T ss_pred EEcCCCEEEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCcCccCccccceeeecc
Confidence 999999999999999876 444 57899999999999999999999999999999996431 24555555544
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.4e-26 Score=188.10 Aligned_cols=193 Identities=32% Similarity=0.573 Sum_probs=143.9
Q ss_pred CCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 34 IGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
++++|++|+.|++|++||+ +..+.+|... |.+++|+|+ +.+|++++.|++|++||............
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~----v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSAS----VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSC----EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCc----eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 5899999999999999998 3456778888 999999997 88999999999999999842211111111
Q ss_pred cc----eeeEEEeec-------------cceee-----eEEEE--eeCC--ceEEeEEecCCCcceEEEEEccCCCCCCc
Q psy13856 105 KY----FKLTVYSTK-------------LTRIL-----ILVRI--CGGD--KWIEETKLENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 105 ~~----~~~~~~~~~-------------~~~l~-----~~v~i--~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 158 (271)
.. .....+++. ++.++ +.|++ ...+ .+.....+.+|...|.+++|+|.. ..+.
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~-~~~~ 220 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRS 220 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC-CCce
Confidence 11 123334433 34565 77888 2322 234677889999999999999940 0148
Q ss_pred EEEEEeCCCeEEEEEcCCCce-eeeeee--ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 159 MIASCSQDRKVIIWTSNDYVT-WTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~-~~~~~~--~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+|++|+.|++|++||++.... +....+ ..|...|++++|+|+|++|++++.|+.|++|+.+..+.|+++.++.
T Consensus 221 ~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~~ 296 (297)
T 2pm7_B 221 YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 296 (297)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC----
T ss_pred EEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEeccccc
Confidence 999999999999999987431 112233 5788899999999999999999999999999998888898887664
No 17
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=5.4e-27 Score=192.21 Aligned_cols=197 Identities=39% Similarity=0.665 Sum_probs=147.8
Q ss_pred CCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 34 IGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
++.+|++|+.|++|++||+ ...+.+|... |.+++|+|+ +.+|++|+.|++|++|+............
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~----V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSS----VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSC----CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCc----eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence 5899999999999999998 3456789998 999999997 78999999999999999842111011111
Q ss_pred c-c----eeeEEEeec-----------------cceee-----eEEEE-ee--CCceEEeEEecCCCcceEEEEEccCCC
Q psy13856 105 K-Y----FKLTVYSTK-----------------LTRIL-----ILVRI-CG--GDKWIEETKLENHSDWVRDVAWAPSWG 154 (271)
Q Consensus 105 ~-~----~~~~~~~~~-----------------~~~l~-----~~v~i-~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~ 154 (271)
. . .....+++. +++++ +.|++ .. .+.+.....+.+|...|.+++|+|...
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence 1 1 122223332 24555 67887 22 233467788899999999999999411
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCc--eeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 155 LSKCMIASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 155 ~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
.++.+|++|+.|++|++|+++... .+....+..|...|++++|+|++.+|++++.|++|++|+....+.|.++.++..
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 113899999999999999997631 111345677899999999999999999999999999999988889999998876
Q ss_pred cc
Q psy13856 233 TS 234 (271)
Q Consensus 233 ~~ 234 (271)
..
T Consensus 306 ~~ 307 (316)
T 3bg1_A 306 GQ 307 (316)
T ss_dssp --
T ss_pred CC
Confidence 43
No 18
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=4.2e-26 Score=187.52 Aligned_cols=189 Identities=20% Similarity=0.304 Sum_probs=149.6
Q ss_pred CCCEEEEccCCCeEEeccc--------------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEeecCC
Q psy13856 34 IGHTLISCDTQAHIGIRST--------------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~--------------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
|+.+|++|+.|+.|++||+ +..+..|... |.+++|+|+ +++|++++.|+.|++||+.
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~--- 142 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS----LYSVKFAPAHLGLKLACLGNDGILRLYDAL--- 142 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEETTCEEEEEECS---
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc----eeEEEEcCCCCCcEEEEecCCCcEEEecCC---
Confidence 6999999999999999998 3456788888 999999999 9999999999999999984
Q ss_pred CCceeeccc------------------eeeEEEeec---cceee-----eEEEE--eeCCceEEeEEecCCCcceEEEEE
Q psy13856 98 SPACLQPKY------------------FKLTVYSTK---LTRIL-----ILVRI--CGGDKWIEETKLENHSDWVRDVAW 149 (271)
Q Consensus 98 ~~~~~~~~~------------------~~~~~~~~~---~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~ 149 (271)
++....... .....+.+. +..++ +.+.+ ...+.......+.+|...|.+++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 222 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW 222 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEE
Confidence 433332211 122233332 45555 55544 344444567888899999999999
Q ss_pred ccCCCCCC----cEEEEEeCCCeEEEEEcCCCc--------------------------------------------eee
Q psy13856 150 APSWGLSK----CMIASCSQDRKVIIWTSNDYV--------------------------------------------TWT 181 (271)
Q Consensus 150 ~p~~~~~~----~~l~s~~~dg~i~iwd~~~~~--------------------------------------------~~~ 181 (271)
+| ++ .+|++|+.||.|++||++... ...
T Consensus 223 ~p----~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 223 AP----SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp CC----CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred CC----CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 99 45 899999999999999998641 012
Q ss_pred eeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 182 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
...+.+|...|++++|+|++.+|++++.||.|++|++++++.+.++..+..+
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC--
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehccc
Confidence 4567789999999999999999999999999999999999999999988764
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=4.4e-26 Score=188.65 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=155.5
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
......|++.+|++|+.|+.|++|++ ...+.+|.+. |.+++|++++. +++++.|++|++||. .
T Consensus 101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~-l~s~s~d~~i~~wd~---~ 172 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY----LSCCRFLDDNQ-IVTSSGDTTCALWDI---E 172 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC----EEEEEEEETTE-EEEEETTSCEEEEET---T
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc----EEEEEECCCCc-EEEEECCCcEEEEEC---C
Confidence 44445679999999999999999997 3457789998 99999998864 889999999999998 6
Q ss_pred CCceeecc-ce----eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCC
Q psy13856 98 SPACLQPK-YF----KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR 167 (271)
Q Consensus 98 ~~~~~~~~-~~----~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg 167 (271)
++.+.... .+ ....+++++..++ +.|++++.........+.+|...|.+++|+| ++.+|++|+.|+
T Consensus 173 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p----~~~~l~s~s~d~ 248 (340)
T 1got_B 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP----NGNAFATGSDDA 248 (340)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT----TSSEEEEEETTS
T ss_pred CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC----CCCEEEEEcCCC
Confidence 66666544 22 3444556677776 7888833222267888999999999999999 699999999999
Q ss_pred eEEEEEcCCCceeeeeee--ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchhh
Q psy13856 168 KVIIWTSNDYVTWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQR 237 (271)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~--~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 237 (271)
.|++||++.... ...+ ..+...|.+++|+|+|.+|++|+.|+.|++||+... +.+..+.+|....
T Consensus 249 ~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---~~~~~~~~h~~~v 315 (340)
T 1got_B 249 TCRLFDLRADQE--LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---DRAGVLAGHDNRV 315 (340)
T ss_dssp CEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCE
T ss_pred cEEEEECCCCcE--EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---cEeeEeecCCCcE
Confidence 999999998765 3333 234458999999999999999999999999999876 5667777776543
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=7.6e-26 Score=184.71 Aligned_cols=196 Identities=20% Similarity=0.172 Sum_probs=159.4
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
.+......|++++|++|+.|+.|++|+. ...+.+|... |.+++|+|++++|++++.|+.|++||. .++
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~d~~i~vwd~---~~~ 97 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSDSNLLVSASDDKTLKIWDV---SSG 97 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TTC
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCc----eEEEEEcCCCCEEEEECCCCEEEEEEC---CCC
Confidence 3444455679999999999999999998 6678899999 999999999999999999999999998 666
Q ss_pred ceeecc-ce----eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeE
Q psy13856 100 ACLQPK-YF----KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 169 (271)
Q Consensus 100 ~~~~~~-~~----~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i 169 (271)
+++... .+ ....+..+++.++ +.+++.+....+....+..|...|.+++|+| ++.+|++|+.|+.|
T Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i 173 (312)
T 4ery_A 98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR----DGSLIVSSSYDGLC 173 (312)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT----TSSEEEEEETTSCE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC----CCCEEEEEeCCCcE
Confidence 665544 22 3344566677777 7788833222267788899999999999999 69999999999999
Q ss_pred EEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 170 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
++||++++... ......+...+..++|+|++.+|++++.|+.|++||++.+ +++..+.++..
T Consensus 174 ~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~ 235 (312)
T 4ery_A 174 RIWDTASGQCL-KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---KCLKTYTGHKN 235 (312)
T ss_dssp EEEETTTCCEE-EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT---EEEEEECSSCC
T ss_pred EEEECCCCcee-eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---cEEEEEEecCC
Confidence 99999987752 2234456778999999999999999999999999999876 66666666543
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=2.3e-26 Score=186.81 Aligned_cols=190 Identities=15% Similarity=0.160 Sum_probs=144.6
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcC--CCCeEEEEeCCCcEEEEEeec
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSP--KLNRSATSSFHEAAKHLGTVQ 95 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~~~d~~~ 95 (271)
.+......++|++||+|+.|++|++||+ +..+.+|.+. |++++|++ ++++|++|+.|++|++||.
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~----V~~v~~s~~~~g~~l~s~s~D~~v~iWd~-- 84 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAHPKFGTILASCSYDGKVMIWKE-- 84 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSC----EEEEEECCGGGCSEEEEEETTTEEEEEEB--
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCC----eEEEEecCCCcCCEEEEEcCCCEEEEEEc--
Confidence 3444445579999999999999999997 5678899999 99999986 4889999999999999998
Q ss_pred CCCCc--eeecc-----ceeeEEEeec--cceee-----eEEEE-e-eCCceEEeEEecCCCcceEEEEEccCCC-----
Q psy13856 96 SSSPA--CLQPK-----YFKLTVYSTK--LTRIL-----ILVRI-C-GGDKWIEETKLENHSDWVRDVAWAPSWG----- 154 (271)
Q Consensus 96 ~~~~~--~~~~~-----~~~~~~~~~~--~~~l~-----~~v~i-~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~----- 154 (271)
.++. .+... ......+.++ +..++ +.|++ . ..........+.+|...|.+++|+|...
T Consensus 85 -~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 85 -ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp -SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred -CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 4332 11111 2234455554 55666 78888 2 2221122456788999999999999410
Q ss_pred ----CCCcEEEEEeCCCeEEEEEcCCCce-e-eeeeeccCCCCeEEEEEecCC---CEEEEEECCCcEEEEEeCCC
Q psy13856 155 ----LSKCMIASCSQDRKVIIWTSNDYVT-W-TPFIMNTFDDVVWNVSWSLTG---DILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 155 ----~~~~~l~s~~~dg~i~iwd~~~~~~-~-~~~~~~~h~~~v~~v~~~~~g---~~l~s~s~D~~v~iw~~~~~ 221 (271)
.++.+|++|+.|+.|++||++.+.. + ....+.+|...|++++|+|++ .+|++++.|++|+||+++..
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 0146999999999999999987652 1 245678999999999999984 89999999999999999764
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.2e-25 Score=187.03 Aligned_cols=191 Identities=13% Similarity=0.100 Sum_probs=153.3
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
.-.++.....|++.+|+||+.|++|++||. ...+..|... |.+++|+|++..+++|+.|+.+++|+.....
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 334555566679999999999999999997 5667778888 9999999999999999999999999973211
Q ss_pred CCc---eeecc-----ceeeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 98 SPA---CLQPK-----YFKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 98 ~~~---~~~~~-----~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
... ..... ......+..++..++ +.|++++-...+.+..+.+|...|.+++|+|.. ++.+|++|+
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~g~~l~sgs 217 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE--TGNTFVSGG 217 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS--SCCEEEEEE
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC--CCCEEEEEe
Confidence 111 11111 123445566666666 889993322226788899999999999998841 368999999
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.||.|++||++++.+ ...+.+|...|++++|+|++.+|++++.|++|++||++.+
T Consensus 218 ~Dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQC--VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp TTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCeEEEEECCCCcE--EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999999886 6778899999999999999999999999999999999866
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=8.9e-26 Score=185.21 Aligned_cols=180 Identities=14% Similarity=0.209 Sum_probs=133.6
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......++|.+|++|+.|++|++||+ +..+.+|... |.+++|+|++++|++|+.|++|++||. +. .+
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s~D~~i~vwd~---~~-~~ 140 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKASMIISGSRDKTIKVWTI---KG-QC 140 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSCEEEEEETTSCEEEEET---TS-CE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCCCEEEEEeCCCeEEEEEC---CC-Ce
Confidence 33445679999999999999999998 6778899999 999999999999999999999999997 33 33
Q ss_pred eecc-ce----eeEEEeec------cceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC
Q psy13856 102 LQPK-YF----KLTVYSTK------LTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 165 (271)
Q Consensus 102 ~~~~-~~----~~~~~~~~------~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~ 165 (271)
+... .+ ....+.+. +..++ +.|++++....+....+.+|...|.+++|+| ++.+|++|+.
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp----~g~~l~s~~~ 216 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP----DGTLIASAGK 216 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT----TSSEEEEEET
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC----CCCEEEEEeC
Confidence 3222 22 12222221 22444 7788843333367788899999999999999 6999999999
Q ss_pred CCeEEEEEcCCCceeeeeeec------------------------------------------------cCCCCeEEEEE
Q psy13856 166 DRKVIIWTSNDYVTWTPFIMN------------------------------------------------TFDDVVWNVSW 197 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~------------------------------------------------~h~~~v~~v~~ 197 (271)
||.|++||+++.+. ...+. .|...+.+++|
T Consensus 217 dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 217 DGEIMLWNLAAKKA--MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAW 294 (319)
T ss_dssp TCEEEEEETTTTEE--EEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEE
T ss_pred CCeEEEEECCCCcE--EEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEE
Confidence 99999999987543 11111 12345667777
Q ss_pred ecCCCEEEEEECCCcEEEEEeCC
Q psy13856 198 SLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 198 ~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
+|+|++|++|+.|+.|++|++.+
T Consensus 295 spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 295 SADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEE
T ss_pred CCCCCEEEEeecCceEEEEEEee
Confidence 77777777777777777777654
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-25 Score=185.38 Aligned_cols=196 Identities=18% Similarity=0.211 Sum_probs=146.4
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc------------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST------------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~------------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~ 93 (271)
+......|++.+|++|+.|++|++||. +..+.+|... |.+++|+|++++|++|+.|++|++||.
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~----V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE----VKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----C----EEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCc----EEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 444555679999999999999999986 3457889999 999999999999999999999999998
Q ss_pred ecC-CCCceeecc-c----eeeEEEeeccceee-----eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEE
Q psy13856 94 VQS-SSPACLQPK-Y----FKLTVYSTKLTRIL-----ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 160 (271)
Q Consensus 94 ~~~-~~~~~~~~~-~----~~~~~~~~~~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 160 (271)
... ...+++... . .....+++++..++ +.|++ ...+.+.++..+.+|...|.+++|+|.. ++.+|
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~l 214 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE--GVFRL 214 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS--SSCEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC--CeeEE
Confidence 321 122333332 2 24455667777777 78888 3344456788999999999999999931 16789
Q ss_pred EEEeCCCeEEEEEcCCCc-----e-eeeeeecc-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEE
Q psy13856 161 ASCSQDRKVIIWTSNDYV-----T-WTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE 229 (271)
Q Consensus 161 ~s~~~dg~i~iwd~~~~~-----~-~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 229 (271)
++|+.|++|++||++... . .....+.. |...|++++|++++ +|++++.|+.|++|+...+ .|+....
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~-~~~~~~~ 288 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG-EWKVFAK 288 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT-EEEEEEE
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC-ceEEEec
Confidence 999999999999987541 0 11233444 89999999999765 8999999999999998743 4544443
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=6.9e-27 Score=199.72 Aligned_cols=183 Identities=15% Similarity=0.037 Sum_probs=144.4
Q ss_pred cccCCCC-CCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEEeecCC
Q psy13856 27 YTESPLR-IGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 27 ~~~~~~~-~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
.+....| ++.+||+|+.||.|+|||+ ...+.+|.+. |++++|+| ++++|++|+.|++|++||+ +
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~----V~~l~f~p~~~~~l~s~s~D~~v~iwd~---~ 195 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGS----ITGLKFNPLNTNQFYASSMEGTTRLQDF---K 195 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCC----CCEEEECSSCTTEEEEECSSSCEEEEET---T
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCC----EEEEEEeCCCCCEEEEEeCCCEEEEeec---c
Confidence 3334444 5679999999999999998 3445689999 99999998 7889999999999999998 4
Q ss_pred CCceeecc-------ceeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 98 SPACLQPK-------YFKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 98 ~~~~~~~~-------~~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
........ ......++.++..++ +.|++ ...+ +.+..+.+|...|.+++|+|. ...+|++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~---~~~~~~s~s 270 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPC---CDWFLATAS 270 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTT---CSSEEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCC---CceEEEEec
Confidence 43332211 112344566677777 77888 4444 566778899999999999995 456899999
Q ss_pred CCCeEEEEEcCCCceee-eeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 165 QDRKVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.|+.|++||+++..... .....+|...|++++|+|+|.+|++++.|+.|+|||+.+.
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 99999999998765321 2234679999999999999999999999999999999865
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=2.1e-25 Score=185.65 Aligned_cols=216 Identities=13% Similarity=0.048 Sum_probs=164.2
Q ss_pred ceeEEee-ceeEeecccc--cc--------ceecccCCCCCCCEEEEccCCCeEEeccc-----------eeeecccccc
Q psy13856 5 EWLLVSC-DGLLMTLKPT--LE--------IETYTESPLRIGHTLISCDTQAHIGIRST-----------ISLLQGSVYL 62 (271)
Q Consensus 5 ~~~~~~~-~~~~~~~~~~--~~--------~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----------~~~~~~h~~~ 62 (271)
.+++..+ ||.+..+... .. ..+......|+|..+++|+.|+.+++|++ ...+.+|...
T Consensus 77 ~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~ 156 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNY 156 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSC
T ss_pred CEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCc
Confidence 3444433 7777766421 11 11233445679999999999999999986 3456789888
Q ss_pred ccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-cee----eEEEee--ccceee-----eEEEEeeCCc
Q psy13856 63 RRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-YFK----LTVYST--KLTRIL-----ILVRICGGDK 130 (271)
Q Consensus 63 ~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~~~----~~~~~~--~~~~l~-----~~v~i~~~~~ 130 (271)
|.+++|+|++..|++++.|++|++||+ .+++++... .+. ...+.. ++..++ +.+++++...
T Consensus 157 ----v~~~~~~~~~~~l~t~s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 157 ----LSACSFTNSDMQILTASGDGTCALWDV---ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp ----EEEEEECSSSSEEEEEETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred ----EEEEEEeCCCCEEEEEeCCCcEEEEeC---CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 999999999999999999999999999 677766554 222 222333 245666 7888833222
Q ss_pred eEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec--cCCCCeEEEEEecCCCEEEEEE
Q psy13856 131 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 131 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s 208 (271)
-+++..+.+|...|.+++|+| ++.+|++|+.|++|++||++.... ...+. .+...+.+++|+|+|.+|++++
T Consensus 230 ~~~~~~~~~h~~~v~~v~~~p----~~~~l~s~s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 230 GQCVQAFETHESDVNSVRYYP----SGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp CCEEEEECCCSSCEEEEEECT----TSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEecCCCCCeEEEEEeC----CCCEEEEEeCCCeEEEEECCCCcE--EEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 267888999999999999999 699999999999999999998765 33333 3345789999999999999999
Q ss_pred CCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 209 GDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 209 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
.|++|++||+..+ ..+..+.+|...
T Consensus 304 ~d~~i~vwd~~~~---~~~~~l~~h~~~ 328 (354)
T 2pbi_B 304 NDYTINVWDVLKG---SRVSILFGHENR 328 (354)
T ss_dssp TTSCEEEEETTTC---SEEEEECCCSSC
T ss_pred CCCcEEEEECCCC---ceEEEEECCCCc
Confidence 9999999999876 566677776654
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=1.4e-25 Score=199.62 Aligned_cols=188 Identities=16% Similarity=0.209 Sum_probs=150.0
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCC----CcEEEEEee
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH----EAAKHLGTV 94 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d----~~i~~~d~~ 94 (271)
+......|||++||+|+.|++|+|||+ ...+.+|.+. |.+++|+|+++.|++++.+ +.|++||.
T Consensus 62 v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~----v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~- 136 (611)
T 1nr0_A 62 TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP----VKDISWDSESKRIAAVGEGRERFGHVFLFDT- 136 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSC----EEEEEECTTSCEEEEEECCSSCSEEEEETTT-
T ss_pred eEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCc----eEEEEECCCCCEEEEEECCCCceeEEEEeeC-
Confidence 344555689999999999999999997 3467789998 9999999999999998875 47888875
Q ss_pred cCCCCceeecc-----ceeeEEEeeccc-eee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEE
Q psy13856 95 QSSSPACLQPK-----YFKLTVYSTKLT-RIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 163 (271)
Q Consensus 95 ~~~~~~~~~~~-----~~~~~~~~~~~~-~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 163 (271)
+.+.... ......+++++. .++ +.+++++....+....+.+|...|.+++|+| ++.+|++|
T Consensus 137 ----~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp----dg~~las~ 208 (611)
T 1nr0_A 137 ----GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP----DGSLFAST 208 (611)
T ss_dssp ----CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECT----TSSEEEEE
T ss_pred ----CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECC----CCCEEEEE
Confidence 2222222 224455666654 355 7888844333477888999999999999999 79999999
Q ss_pred eCCCeEEEEEcCCCceeeeeeec-------cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 164 SQDRKVIIWTSNDYVTWTPFIMN-------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 164 ~~dg~i~iwd~~~~~~~~~~~~~-------~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+.|++|++||..+++. ...+. +|.+.|++++|+|+|.+|++++.|++|++||++++ +++.++.
T Consensus 209 s~D~~i~lwd~~~g~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~---~~~~~~~ 278 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTK--TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL---KVEKTIP 278 (611)
T ss_dssp ETTSCEEEEETTTCCE--EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEE
T ss_pred ECCCcEEEEECCCCcE--eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC---ceeeeec
Confidence 9999999999988775 44442 79999999999999999999999999999999876 5555554
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=8.9e-26 Score=198.90 Aligned_cols=172 Identities=23% Similarity=0.292 Sum_probs=147.7
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
....|||++|++++.|+.|++||. +..+.+|... |.+++|+|++++|++++.|+.+++|+. . ++.+..
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~----v~~~~~s~d~~~l~~~~~d~~v~~w~~---~-~~~~~~ 462 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS----VWGVAFSPDDQTIASASDDKTVKLWNR---N-GQLLQT 462 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---T-SCEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCC----eEEEEECCCCCEEEEEcCCCEEEEEEC---C-CCEEEE
Confidence 334579999999999999999998 6778899999 999999999999999999999999995 2 334333
Q ss_pred c-c----eeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEE
Q psy13856 105 K-Y----FKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 173 (271)
Q Consensus 105 ~-~----~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd 173 (271)
. . .....+++++++++ +.|++ ..++ +.++.+.+|...|++++|+| ++.+|++++.|+.|++||
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--~~~~~~~~h~~~v~~l~~s~----dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSP----DGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECT----TSSCEEEEETTSEEEEEC
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--CEEEEEeCCCCCEEEEEEcC----CCCEEEEEECcCEEEEEe
Confidence 2 2 24456677788887 78888 5555 67889999999999999999 799999999999999999
Q ss_pred cCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 174 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 174 ~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
. +++. ...+.+|.+.|++++|+|||++|++++.|++|++||
T Consensus 537 ~-~~~~--~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 537 R-NGQL--LQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp T-TSCE--EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred C-CCCE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 6 4454 677889999999999999999999999999999997
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=3.3e-25 Score=182.36 Aligned_cols=196 Identities=15% Similarity=0.156 Sum_probs=152.4
Q ss_pred cceecccCCCCC-CCEEEEccCCCeEEeccc----------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEE
Q psy13856 23 EIETYTESPLRI-GHTLISCDTQAHIGIRST----------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHL 91 (271)
Q Consensus 23 ~~~~~~~~~~~~-g~~l~s~s~d~~i~lwd~----------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~ 91 (271)
.-.+......|+ +++|+|||.|++|++||+ ...+.+|... |.+++|+|++++|++++.|+.+++|
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~----V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF----VSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC----EEEEEECCCCCEEEEEcccccceEE
Confidence 334455555566 689999999999999997 4567899999 9999999999999999999999999
Q ss_pred EeecCCCCceeecc-----ceeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEE
Q psy13856 92 GTVQSSSPACLQPK-----YFKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 160 (271)
Q Consensus 92 d~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 160 (271)
+. ......... ......+...+..++ +.+++ .............+|...+..++|++.. ...++
T Consensus 114 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~ 188 (340)
T 4aow_A 114 DL---TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS--SNPII 188 (340)
T ss_dssp ET---TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS--SSCEE
T ss_pred ee---cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC--CCcEE
Confidence 98 444443332 113333444456665 66777 3233224455667899999999999842 35688
Q ss_pred EEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 161 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 161 ~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
++++.|+.|++||.++.+. ...+.+|.+.|++++|+|++.+|++++.|+.|++||++.. +++..+..
T Consensus 189 ~s~~~d~~i~i~d~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~---~~~~~~~~ 255 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKL--KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG---KHLYTLDG 255 (340)
T ss_dssp EEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT---EEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCce--eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC---ceeeeecC
Confidence 9999999999999999876 6778899999999999999999999999999999999876 45555544
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=1.4e-25 Score=199.44 Aligned_cols=189 Identities=15% Similarity=0.173 Sum_probs=152.2
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
........|||++|++++. +.|++|++ ...+.+|... |++++|+|+|++|++|+.|++|++||...+ ..
T Consensus 20 ~~~~~~~spdg~~l~~~~~-~~v~l~~~~~~~~~~~~~~h~~~----v~~~~~spdg~~lasg~~d~~v~lWd~~~~-~~ 93 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNG-TSVYTVPVGSLTDTEIYTEHSHQ----TTVAKTSPSGYYCASGDVHGNVRIWDTTQT-TH 93 (611)
T ss_dssp CCCCCEECTTSSEEEEEET-TEEEEEETTCSSCCEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEESSST-TC
T ss_pred ceeEEeeCCCCCEEEeCCC-CEEEEecCCCcccCeEecCCCCc----eEEEEECCCCcEEEEEeCCCCEEEeECCCC-cc
Confidence 3455555689999999985 79999998 6778999999 999999999999999999999999998321 11
Q ss_pred ceeecc-----ceeeEEEeeccceee---------eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCc-EEEEEe
Q psy13856 100 ACLQPK-----YFKLTVYSTKLTRIL---------ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCS 164 (271)
Q Consensus 100 ~~~~~~-----~~~~~~~~~~~~~l~---------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~l~s~~ 164 (271)
...... ......|+++++.++ +.+++.+.+ .....+.+|...|.+++|+| ++. .|++|+
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~~~~~l~gh~~~v~~v~f~p----~~~~~l~s~s 167 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--TSNGNLTGQARAMNSVDFKP----SRPFRIISGS 167 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--CBCBCCCCCSSCEEEEEECS----SSSCEEEEEE
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--CCcceecCCCCCceEEEECC----CCCeEEEEEe
Confidence 122111 234566777788877 256664455 45667889999999999999 454 699999
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEe
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 230 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 230 (271)
.|++|++||..+.+. ...+.+|...|++++|+|+|.+|++++.|++|++||+.++ +++..+
T Consensus 168 ~D~~v~lwd~~~~~~--~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g---~~~~~~ 228 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKF--KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG---TKTGVF 228 (611)
T ss_dssp TTSCEEEEETTTBEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEC
T ss_pred CCCeEEEEECCCCeE--eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC---cEeeee
Confidence 999999999887665 6778899999999999999999999999999999998776 444444
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-25 Score=182.32 Aligned_cols=186 Identities=23% Similarity=0.239 Sum_probs=144.4
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-------eeee-cc-ccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeec
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-------ISLL-QG-SVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQ 95 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~-~~-h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~ 95 (271)
.++...+.++ +|++|+.|++|++||+ ...+ .+ |... |.+++|+|++++|++|+.|++|++|+...
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~----v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKA----IRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSC----EEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCC----EEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 3344444444 9999999999999998 2333 34 8888 99999999999999999999999999732
Q ss_pred CC----CCceeecc-c----eeeEEEeeccceee-----eEEEE-ee--C-CceEEeEEecCCCcceEEEEEccCCCCCC
Q psy13856 96 SS----SPACLQPK-Y----FKLTVYSTKLTRIL-----ILVRI-CG--G-DKWIEETKLENHSDWVRDVAWAPSWGLSK 157 (271)
Q Consensus 96 ~~----~~~~~~~~-~----~~~~~~~~~~~~l~-----~~v~i-~~--~-~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 157 (271)
.. ...+.... . .....+++++++++ +.|++ .. . ..++++..+.+|...|.+++|+| ++
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p----~~ 165 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP----SE 165 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS----SS
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC----CC
Confidence 11 12222222 2 23455667788887 78888 22 1 23467788899999999999999 69
Q ss_pred cEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecC--CCEEEEEECCCcEEEEEeCC
Q psy13856 158 CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT--GDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 158 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~--g~~l~s~s~D~~v~iw~~~~ 220 (271)
.+|++|+.|++|++||...+.......+.+|...|++++|+|+ +.+|++++.|++|++|+++.
T Consensus 166 ~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 9999999999999999877632226778899999999999998 77899999999999999864
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=6.2e-26 Score=190.54 Aligned_cols=199 Identities=11% Similarity=0.065 Sum_probs=151.0
Q ss_pred ccceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecC
Q psy13856 22 LEIETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQS 96 (271)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~ 96 (271)
+.-.++.....|++.+|++|+.|++|++||. ...+..|... |.+++|+|++++|++|+.|+.+++|++...
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~----v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW----VMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT----CCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC----EEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 3445566666679999999999999999998 6778899999 999999999999999999999999998321
Q ss_pred CC----Cceeecc-ce----eeEEEeec-cceee-----eEEEEeeCCceEEeEEe-----cCCCcceEEEEEccCCCCC
Q psy13856 97 SS----PACLQPK-YF----KLTVYSTK-LTRIL-----ILVRICGGDKWIEETKL-----ENHSDWVRDVAWAPSWGLS 156 (271)
Q Consensus 97 ~~----~~~~~~~-~~----~~~~~~~~-~~~l~-----~~v~i~~~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~~ 156 (271)
.. ....... .+ ....+... ...++ +.|++++...-..+..+ .+|...|.+++|+|. +
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~ 217 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL---N 217 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS---S
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC---C
Confidence 10 0111111 11 12222332 33344 77888322211445555 679999999999875 6
Q ss_pred CcEEEEEeCCCeEEEEEcCCC-ceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 157 KCMIASCSQDRKVIIWTSNDY-VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
+.+|++|+.|+.|++||++.. .. ...+.+|.+.|++++|+|++.+|++++.|++|++||++++ .++..+..
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~---~~~~~~~~ 289 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRA--VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG---HQLQVYNR 289 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCC--CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT---EEEEEECC
T ss_pred CCEEEEEECCCeEEEEECCCCCcc--eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC---cEEEEecc
Confidence 899999999999999999854 33 6778899999999999999999999999999999999877 45544443
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=7.7e-25 Score=181.33 Aligned_cols=176 Identities=19% Similarity=0.211 Sum_probs=141.0
Q ss_pred CCCCEEEEccCCCeEEeccc------------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 33 RIGHTLISCDTQAHIGIRST------------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~------------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+++.+|++|+.|++|++||+ ...+.+|... |.+++|+|++.++++|+.|++|++||+ ++++
T Consensus 37 ~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~----V~~~~~~~~~~~l~s~s~D~~v~lwd~---~~~~ 109 (343)
T 2xzm_R 37 EDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHF----VSDLALSQENCFAISSSWDKTLRLWDL---RTGT 109 (343)
T ss_dssp CCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSC----EEEEEECSSTTEEEEEETTSEEEEEET---TSSC
T ss_pred CCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCc----eEEEEECCCCCEEEEEcCCCcEEEEEC---CCCc
Confidence 38999999999999999997 3457899999 999999999999999999999999999 6666
Q ss_pred eeecc-ce----eeEEEeeccceee-----eEEEE-eeCCceEEeEEe---cCCCcceEEEEEccCC------CCCCcEE
Q psy13856 101 CLQPK-YF----KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKL---ENHSDWVRDVAWAPSW------GLSKCMI 160 (271)
Q Consensus 101 ~~~~~-~~----~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~---~~h~~~v~~v~~~p~~------~~~~~~l 160 (271)
++... .+ ....++++++.++ +.|++ ...+ ...... .+|...|.+++|+|.. .+.+.+|
T Consensus 110 ~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 110 TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--CceeeeecccCCCceeeeeeeccccccccccCCCCCEE
Confidence 66544 22 4455666777777 77888 3223 222222 3788999999999941 0012799
Q ss_pred EEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 161 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 161 ~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
++++.|+.|++||.. ... ...+.+|...|.+++|+|+|.+|++++.|+.|++||+..
T Consensus 188 ~s~~~d~~i~iwd~~-~~~--~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 188 ASVGWDGRLKVWNTN-FQI--RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEETTSEEEEEETT-TEE--EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred EEEcCCCEEEEEcCC-Cce--eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999954 333 567789999999999999999999999999999999943
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=3e-25 Score=184.89 Aligned_cols=192 Identities=8% Similarity=0.031 Sum_probs=143.7
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
......|++. +++++.||+|++||+ .....+|... |.+++|+|++++|++|+.|++|++||. .
T Consensus 98 ~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~----V~~v~~spdg~~l~sgs~dg~v~iwd~---~ 169 (357)
T 4g56_B 98 TDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDI----VKTLSVFSDGTQAVSGGKDFSVKVWDL---S 169 (357)
T ss_dssp EEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSC----EEEEEECSSSSEEEEEETTSCEEEEET---T
T ss_pred EEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCC----EEEEEECCCCCEEEEEeCCCeEEEEEC---C
Confidence 3444456765 556778899999998 1234578888 999999999999999999999999998 6
Q ss_pred CCceeecc-ce----eeEEEeeccc-eee-----eEEEEe--eCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 98 SPACLQPK-YF----KLTVYSTKLT-RIL-----ILVRIC--GGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 98 ~~~~~~~~-~~----~~~~~~~~~~-~l~-----~~v~i~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
+++++... .+ ....++.++. .++ +.|+++ ..+.......+..|...+.+++|+|. ++.+|++|+
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~---~~~~la~g~ 246 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE---KDDTFACGD 246 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT---STTEEEEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc---ccceEEEee
Confidence 77766554 22 3334444443 444 778882 23321222234557788999999996 578999999
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCC-CEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
.|+.|++||+++++. ...+.+|...|++++|+|++ .+|++++.|++|+|||++++ +.+..+ +|..
T Consensus 247 ~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---~~~~~~-~H~~ 312 (357)
T 4g56_B 247 ETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---EVFRDL-SHRD 312 (357)
T ss_dssp SSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---EEEEEC-CCSS
T ss_pred cccceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---cEeEEC-CCCC
Confidence 999999999998876 77888999999999999987 68999999999999999876 444433 4543
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=2.3e-26 Score=188.43 Aligned_cols=176 Identities=22% Similarity=0.253 Sum_probs=142.3
Q ss_pred ccceecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcC--CCCeEEEEeCCCcEEEEE
Q psy13856 22 LEIETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSP--KLNRSATSSFHEAAKHLG 92 (271)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~~~d 92 (271)
++-.+......++|++|++|+.|++|++||+ +..+.+|.+. |++++|++ ++++|++|+.|++|++||
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~----V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGP----VWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSC----EEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCcc----EEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 3444555555679999999999999999997 4567899999 99999986 489999999999999999
Q ss_pred eecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEE
Q psy13856 93 TVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 172 (271)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iw 172 (271)
.. + +.+.....+.+|...|.+++|+|.. ++.+|++|+.|+.|++|
T Consensus 88 ~~---~------------------------------~~~~~~~~~~~h~~~V~~v~~~p~~--~g~~lasgs~D~~i~lw 132 (316)
T 3bg1_A 88 EE---N------------------------------GTWEKSHEHAGHDSSVNSVCWAPHD--YGLILACGSSDGAISLL 132 (316)
T ss_dssp CS---S------------------------------SCCCEEEEECCCSSCCCEEEECCTT--TCSCEEEECSSSCEEEE
T ss_pred CC---C------------------------------CcceEEEEccCCCCceEEEEECCCC--CCcEEEEEcCCCCEEEE
Confidence 82 2 2223455677899999999999931 27899999999999999
Q ss_pred EcCCCceee-eeeeccCCCCeEEEEEecC-----------------CCEEEEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 173 TSNDYVTWT-PFIMNTFDDVVWNVSWSLT-----------------GDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 173 d~~~~~~~~-~~~~~~h~~~v~~v~~~~~-----------------g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
|++....+. ...+.+|...|.+++|+|+ +.+|++|+.|++|++||++..+.|.+...+.+|.
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 133 TYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp EECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS
T ss_pred ecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC
Confidence 998764321 3456789999999999997 4789999999999999998766777887887776
Q ss_pred hh
Q psy13856 235 EQ 236 (271)
Q Consensus 235 ~~ 236 (271)
..
T Consensus 213 ~~ 214 (316)
T 3bg1_A 213 DW 214 (316)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.7e-24 Score=190.71 Aligned_cols=190 Identities=23% Similarity=0.260 Sum_probs=157.9
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCcee
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACL 102 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~ 102 (271)
......|+|.+|++|+.|+.|++||. +..+.+|... |.+++|+|++++|++++.|+.|++|+. +++.+
T Consensus 348 ~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~----v~~~~~s~dg~~l~~~~~d~~v~~~~~----~~~~~ 419 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS----VRGVAFSPDGQTIASASDDKTVKLWNR----NGQLL 419 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSC----EEEEEECTTSSCEEEEETTSEEEEECT----TCCEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCC----eEEEEECCCCCEEEEEeCCCEEEEEeC----CCCEE
Confidence 34445689999999999999999998 6778899998 999999999999999999999999994 23444
Q ss_pred ecc-c----eeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEE
Q psy13856 103 QPK-Y----FKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 171 (271)
Q Consensus 103 ~~~-~----~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~i 171 (271)
... . .....+++++++++ +.+++ ..++ +.+..+.+|...|.+++|+| ++.+|++++.|+.|++
T Consensus 420 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~sp----d~~~las~~~d~~i~i 493 (577)
T 2ymu_A 420 QTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSP----DGQTIASASDDKTVKL 493 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECT----TSCEEEEEETTSEEEE
T ss_pred EEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcC----CCCEEEEEeCCCEEEE
Confidence 332 2 23455666777777 78888 5455 67788899999999999999 7999999999999999
Q ss_pred EEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchhh
Q psy13856 172 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQR 237 (271)
Q Consensus 172 wd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 237 (271)
||.. ++. ...+.+|...|++++|+|+|++|++++.|+.|++||.. + +++..+.+|....
T Consensus 494 w~~~-~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~---~~~~~~~~h~~~v 552 (577)
T 2ymu_A 494 WNRN-GQL--LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSV 552 (577)
T ss_dssp EETT-SCE--EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S---CEEEEEECCSSCE
T ss_pred EcCC-CCE--EEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-C---CEEEEEcCCCCCE
Confidence 9964 454 67788999999999999999999999999999999964 4 5677777776553
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.9e-24 Score=179.05 Aligned_cols=192 Identities=31% Similarity=0.535 Sum_probs=149.6
Q ss_pred CCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEeecCCCCceee
Q psy13856 33 RIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~~~~~~~~~~~ 103 (271)
.++.+|++|+.|+.|++||+ +..+..|... |.+++|+|+ +.+|++++.|+.|++||...........
T Consensus 67 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 142 (379)
T 3jrp_A 67 KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSAS----VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII 142 (379)
T ss_dssp GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE
T ss_pred CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcc----eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE
Confidence 34899999999999999998 4556778888 999999999 9999999999999999984322222222
Q ss_pred cc----ceeeEEEee-------------ccceee-----eEEEE--ee--CCceEEeEEecCCCcceEEEEEccCCCCC-
Q psy13856 104 PK----YFKLTVYST-------------KLTRIL-----ILVRI--CG--GDKWIEETKLENHSDWVRDVAWAPSWGLS- 156 (271)
Q Consensus 104 ~~----~~~~~~~~~-------------~~~~l~-----~~v~i--~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~~- 156 (271)
.. ......+.+ ++..++ +.|++ .. ...+.....+.+|...|.+++|+| +
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp----~~ 218 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP----TV 218 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC----CC
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC----CC
Confidence 11 123344554 356666 67777 22 222456778899999999999999 6
Q ss_pred --CcEEEEEeCCCeEEEEEcCCCcee---eeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 157 --KCMIASCSQDRKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 157 --~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+.+|++++.||.|++||++.+... .......|...|++++|+|++.+|++++.||.|++|+++..+.|.....+.
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 298 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH 298 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC
T ss_pred CCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccccee
Confidence 899999999999999999886421 122234588899999999999999999999999999999888888877665
Q ss_pred c
Q psy13856 232 K 232 (271)
Q Consensus 232 ~ 232 (271)
.
T Consensus 299 ~ 299 (379)
T 3jrp_A 299 Q 299 (379)
T ss_dssp -
T ss_pred c
Confidence 4
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=6.6e-26 Score=189.56 Aligned_cols=190 Identities=14% Similarity=0.161 Sum_probs=142.2
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
.+......|++++|++|+.|+.|++||+ ...+.+|... |.+++|+|++++|++++.|+.|++||...+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKI----VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSC----EEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCce----EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 4555556679999999999999999998 4567789998 9999999999999999999999999984222
Q ss_pred CC-ceeeccce----eeEEEeeccceee-----eEEEE--eeCC-ceEEeEEecC-CCcceEEEEEccCCCCCCcEEEEE
Q psy13856 98 SP-ACLQPKYF----KLTVYSTKLTRIL-----ILVRI--CGGD-KWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASC 163 (271)
Q Consensus 98 ~~-~~~~~~~~----~~~~~~~~~~~l~-----~~v~i--~~~~-~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~ 163 (271)
.. .......+ ....++.+++.++ +.+++ ...+ .+.....+.+ |...|.+++|+| ++.+|+++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~~~ 164 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP----NNVLLAAG 164 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT----TSSEEEEE
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC----CCCEEEEE
Confidence 01 12222222 3444555677776 67888 2222 1224677777 999999999999 69999999
Q ss_pred eCCCeEEEEEcCCCc----------------eeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCc
Q psy13856 164 SQDRKVIIWTSNDYV----------------TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 223 (271)
Q Consensus 164 ~~dg~i~iwd~~~~~----------------~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~ 223 (271)
+.|+.|++||++... ......+ +|...|.+++|+|++.+|++++.|+.|++||++++..
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 999999999986321 1113344 8999999999999999999999999999999987643
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=8e-25 Score=197.35 Aligned_cols=184 Identities=16% Similarity=0.185 Sum_probs=147.7
Q ss_pred CCCEEEEccCCCeEEeccc----------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceee
Q psy13856 34 IGHTLISCDTQAHIGIRST----------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~ 103 (271)
++++|+||+.|++|++|++ ...+.+|... |.+++|+|++++|++|+.|++|++||+ .++.+..
T Consensus 394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~----v~~v~~s~~g~~l~sgs~Dg~v~vwd~---~~~~~~~ 466 (694)
T 3dm0_A 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHF----VEDVVLSSDGQFALSGSWDGELRLWDL---AAGVSTR 466 (694)
T ss_dssp CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TTTEEEE
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCc----EEEEEECCCCCEEEEEeCCCcEEEEEC---CCCccee
Confidence 4579999999999999997 3467899999 999999999999999999999999998 6666655
Q ss_pred cc-ce----eeEEEeeccceee-----eEEEEee-CCc--eEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEE
Q psy13856 104 PK-YF----KLTVYSTKLTRIL-----ILVRICG-GDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 170 (271)
Q Consensus 104 ~~-~~----~~~~~~~~~~~l~-----~~v~i~~-~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~ 170 (271)
.. .+ ....++.+++.++ +.|++++ .+. ........+|...|.+++|+|+. ...++++|+.|+.|+
T Consensus 467 ~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 467 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT--LQPTIVSASWDKTVK 544 (694)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS--SSCEEEEEETTSCEE
T ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC--CcceEEEEeCCCeEE
Confidence 44 22 3455666677777 7888832 221 11111225788999999999941 136899999999999
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+||+++... ...+.+|.+.|++++|+|++.+|++++.|+.|++||+.++ +++..+.
T Consensus 545 vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~---~~~~~~~ 600 (694)
T 3dm0_A 545 VWNLSNCKL--RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG---KKLYSLE 600 (694)
T ss_dssp EEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT---EEEECCB
T ss_pred EEECCCCcE--EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---ceEEEec
Confidence 999998776 6778899999999999999999999999999999999876 4444443
No 40
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=5e-24 Score=176.43 Aligned_cols=179 Identities=13% Similarity=0.116 Sum_probs=137.9
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......|++.++++|+.|++|++||+ +..+.+|... |.+++|+|++++|++++.|++|++||. .....
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~----v~~v~~sp~~~~l~s~~~d~~i~~wd~---~~~~~ 152 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE----VYSVAFSPDNRQILSAGAEREIKLWNI---LGECK 152 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSC----EEEEEECSSTTEEEEEETTSCEEEEES---SSCEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc----EEEEEECCCCCEEEEEcCCCEEEEEec---cCCce
Confidence 33445579999999999999999998 6778899999 999999999999999999999999998 32211
Q ss_pred eecc-------ceeeEEEeecc----------ceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCc
Q psy13856 102 LQPK-------YFKLTVYSTKL----------TRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 102 ~~~~-------~~~~~~~~~~~----------~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 158 (271)
.... ......+++.+ .+++ +.|++ .... .....+.+|...|.+++|+| ++.
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~----~g~ 226 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISP----NGK 226 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECT----TSS
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECC----CCC
Confidence 1111 11233333333 3455 78888 4333 66778889999999999999 699
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 159 MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+|++|+.|+.|++||+..... ......+...|.+++|+|++.+++++ .|+.|++|++.+.
T Consensus 227 ~l~sgs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 227 YIATGGKDKKLLIWDILNLTY--PQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQ 286 (343)
T ss_dssp EEEEEETTCEEEEEESSCCSS--CSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSC
T ss_pred EEEEEcCCCeEEEEECCCCcc--cceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCC
Confidence 999999999999999955432 22222355679999999999988765 4788999999765
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=9.4e-25 Score=183.35 Aligned_cols=151 Identities=14% Similarity=0.135 Sum_probs=124.4
Q ss_pred CCCCEEEEccCCCeEEeccc------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccc
Q psy13856 33 RIGHTLISCDTQAHIGIRST------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKY 106 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~ 106 (271)
+++.+|++|+.|++|++||+ +..+.+|.+. |.+++|+|++++|++|+.|++|++||. .++.++....
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s~s~D~~i~lwd~---~~~~~~~~~~ 288 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD----INSVKFFPDGQRFGTGSDDGTCRLFDM---RTGHQLQVYN 288 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC----CCEEEECTTSSEEEEECSSSCEEEEET---TTTEEEEEEC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC----eEEEEEecCCCeEEEEcCCCeEEEEEC---CCCcEEEEec
Confidence 37889999999999999997 5678899999 999999999999999999999999998 4444333110
Q ss_pred eeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee-
Q psy13856 107 FKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM- 185 (271)
Q Consensus 107 ~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~- 185 (271)
.. ......+...|.+++|+| ++.++++|+.||.|++||...++. ...+
T Consensus 289 ~~-------------------------~~~~~~~~~~v~~~~~s~----~g~~l~~g~~dg~i~vwd~~~~~~--~~~~~ 337 (380)
T 3iz6_a 289 RE-------------------------PDRNDNELPIVTSVAFSI----SGRLLFAGYSNGDCYVWDTLLAEM--VLNLG 337 (380)
T ss_dssp CC-------------------------CSSSCCSSCSCSEEEECS----SSSEEEEECTTSCEEEEETTTCCE--EEEEC
T ss_pred cc-------------------------ccccccccCceEEEEECC----CCCEEEEEECCCCEEEEECCCCce--EEEEe
Confidence 00 000012334689999999 699999999999999999988775 3333
Q ss_pred ---ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 186 ---NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 186 ---~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.+|.+.|++++|+|+|.+|++|+.|++|++|++...
T Consensus 338 ~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 338 TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 689999999999999999999999999999998754
No 42
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=9.5e-24 Score=178.00 Aligned_cols=181 Identities=18% Similarity=0.200 Sum_probs=144.6
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
+......|++.+|++|+.|++|++||+ ...+ .+... +.+++|+| ++++|++|+.|+.|++||. .++
T Consensus 168 v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~----v~~~~~~~~~~~~l~~~s~d~~v~iwd~---~~~ 239 (393)
T 1erj_A 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL-SIEDG----VTTVAVSPGDGKYIAAGSLDRAVRVWDS---ETG 239 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSC----EEEEEECSTTCCEEEEEETTSCEEEEET---TTC
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-EcCCC----cEEEEEECCCCCEEEEEcCCCcEEEEEC---CCC
Confidence 445555689999999999999999998 2233 34555 89999999 8999999999999999998 555
Q ss_pred ceeecc------------ceeeEEEeeccceee-----eEEEEeeCC------------ceEEeEEecCCCcceEEEEEc
Q psy13856 100 ACLQPK------------YFKLTVYSTKLTRIL-----ILVRICGGD------------KWIEETKLENHSDWVRDVAWA 150 (271)
Q Consensus 100 ~~~~~~------------~~~~~~~~~~~~~l~-----~~v~i~~~~------------~~~~~~~~~~h~~~v~~v~~~ 150 (271)
.++... ......++.+++.++ +.|++++-. ...+...+.+|...|.+++|+
T Consensus 240 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 319 (393)
T 1erj_A 240 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 319 (393)
T ss_dssp CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC
T ss_pred cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC
Confidence 554332 123445666677777 778882111 013456778999999999999
Q ss_pred cCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEec------CCCEEEEEECCCcEEEEEeCC
Q psy13856 151 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL------TGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 151 p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~------~g~~l~s~s~D~~v~iw~~~~ 220 (271)
| ++.+|++|+.|+.|++||.+++.. ...+.+|...|.+++|++ ++.+|++|+.|++|+||++..
T Consensus 320 ~----~~~~l~sgs~D~~v~iwd~~~~~~--~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 320 Q----NDEYILSGSKDRGVLFWDKKSGNP--LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp G----GGCEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred C----CCCEEEEEeCCCeEEEEECCCCeE--EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9 689999999999999999999886 677889999999999986 678999999999999999863
No 43
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=2e-23 Score=170.16 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=144.3
Q ss_pred CcceeEEeeceeEeecccc------------ccceecccCCCCCCCEEEEccCCCeEEeccc-----e------------
Q psy13856 3 SKEWLLVSCDGLLMTLKPT------------LEIETYTESPLRIGHTLISCDTQAHIGIRST-----I------------ 53 (271)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~------------ 53 (271)
+...|.+.+|+.+.-+... ....+......|++++|++|+.|++|++||+ +
T Consensus 35 ~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 35 SGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence 3445666777776655321 1112344555689999999999999999997 2
Q ss_pred -----------------------------eeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 54 -----------------------------SLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 54 -----------------------------~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
..+.+|... +..++|+++++++++++.|+.|++||...++.......
T Consensus 115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 190 (318)
T 4ggc_A 115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE----VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 190 (318)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC----EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE
T ss_pred eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc----eEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee
Confidence 223345555 77889999999999999999999999843221111111
Q ss_pred --cc----eeeEEEeeccceee--------eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEE--eCCCe
Q psy13856 105 --KY----FKLTVYSTKLTRIL--------ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--SQDRK 168 (271)
Q Consensus 105 --~~----~~~~~~~~~~~~l~--------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~--~~dg~ 168 (271)
.. .....+......+. +.+++.+...... .....+...+..+.|+|. +..++++ +.|+.
T Consensus 191 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~~~~sg~~d~~ 265 (318)
T 4ggc_A 191 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-LSAVDAHSQVCSILWSPH----YKELISGHGFAQNQ 265 (318)
T ss_dssp EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-EEEEECSSCEEEEEEETT----TTEEEEEECTTTCC
T ss_pred eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-cccccceeeeeeeeeccc----ccceEEEEEcCCCE
Confidence 11 12222333333222 6788722222123 233447788999999994 6666554 47999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
|++||+++++. ...+.+|.+.|++++|+|+|.+|++|+.|++|+|||+..
T Consensus 266 i~iwd~~~~~~--~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 266 LVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99999999887 778899999999999999999999999999999999864
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=9.4e-24 Score=172.26 Aligned_cols=195 Identities=15% Similarity=0.201 Sum_probs=151.8
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......|++++|++|+.|+.|++||+ +..+.+|... |.+++|+|++++|++|+.|+.|++||. ++++
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~~~d~~i~iwd~---~~~~ 140 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY----VFCCNFNPQSNLIVSGSFDESVRIWDV---KTGK 140 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEETTSCEEEEET---TTCC
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC----EEEEEEcCCCCEEEEEeCCCcEEEEEC---CCCE
Confidence 344445579999999999999999998 6778899999 999999999999999999999999998 6666
Q ss_pred eeecc-c----eeeEEEeeccceee-----eEEEEeeCCceEEeEEe-cCCCcceEEEEEccCCCCCCcEEEEEeCCCeE
Q psy13856 101 CLQPK-Y----FKLTVYSTKLTRIL-----ILVRICGGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 169 (271)
Q Consensus 101 ~~~~~-~----~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i 169 (271)
+.... . .....++.+++.++ +.+++.+....+....+ ..+...+..++|+| ++.+|++++.|+.|
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~d~~i 216 (312)
T 4ery_A 141 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP----NGKYILAATLDNTL 216 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT----TSSEEEEEETTTEE
T ss_pred EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC----CCCEEEEEcCCCeE
Confidence 65544 1 23344556677776 77888322221444444 45667899999999 69999999999999
Q ss_pred EEEEcCCCceeeeeeeccCCCCeEE--EEEe-cCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 170 IIWTSNDYVTWTPFIMNTFDDVVWN--VSWS-LTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~h~~~v~~--v~~~-~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
++||+++++. ...+.+|.....+ ..++ +++.+|++|+.|+.|++||+.++ +.+.++.+|...
T Consensus 217 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h~~~ 281 (312)
T 4ery_A 217 KLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK---EIVQKLQGHTDV 281 (312)
T ss_dssp EEEETTTTEE--EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---CEEEEECCCSSC
T ss_pred EEEECCCCcE--EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---hhhhhhhccCCc
Confidence 9999998876 6667777654332 3344 67899999999999999999877 667778777654
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=1.5e-23 Score=174.57 Aligned_cols=194 Identities=13% Similarity=0.118 Sum_probs=150.7
Q ss_pred eecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 25 ETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 25 ~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
.+......|++++|++|+.|+.|++||. +..+.+|... |.+++|+|++++|++++.|+.|++||. .
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~~~~~dg~i~vwd~---~ 82 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ----VTGVDWAPDSNRIVTCGTDRNAYVWTL---K 82 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSC----EEEEEEETTTTEEEEEETTSCEEEEEE---E
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCc----ccEEEEeCCCCEEEEEcCCCeEEEEEC---C
Confidence 3444555679999999999999999998 4567789888 999999999999999999999999998 4
Q ss_pred CCceeec---c----ceeeEEEeeccceee-----eEEEE--eeCC-ceEEeE-EecCCCcceEEEEEccCCCCCCcEEE
Q psy13856 98 SPACLQP---K----YFKLTVYSTKLTRIL-----ILVRI--CGGD-KWIEET-KLENHSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 98 ~~~~~~~---~----~~~~~~~~~~~~~l~-----~~v~i--~~~~-~~~~~~-~~~~h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
.++.... . ......++.+++.++ +.+++ .... .+.... ...+|...|.+++|+| ++.+|+
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~ 158 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP----NSVLLA 158 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT----TSSEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC----CCCEEE
Confidence 4443222 1 123445566677776 66776 2222 222333 3467899999999999 689999
Q ss_pred EEeCCCeEEEEEcC------------------CCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCc
Q psy13856 162 SCSQDRKVIIWTSN------------------DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 223 (271)
Q Consensus 162 s~~~dg~i~iwd~~------------------~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~ 223 (271)
+++.|+.|++||++ .+.. ...+..|...|.+++|+|++.+|++++.|+.|++||++++
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-- 234 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL--MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-- 234 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE--EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT--
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhh--eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC--
Confidence 99999999999964 3333 5667789999999999999999999999999999999876
Q ss_pred eeEEEEecccc
Q psy13856 224 WQCITEMGKTS 234 (271)
Q Consensus 224 ~~~~~~~~~~~ 234 (271)
+++..+..+.
T Consensus 235 -~~~~~~~~~~ 244 (372)
T 1k8k_C 235 -MAVATLASET 244 (372)
T ss_dssp -TEEEEEECSS
T ss_pred -ceeEEEccCC
Confidence 4555555543
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.7e-24 Score=183.42 Aligned_cols=208 Identities=14% Similarity=0.032 Sum_probs=153.9
Q ss_pred eeccccccceecccCCCC-CCCEEEEccCCCeEEeccc-e---------eeeccccccccccceEEEEcCCCCeEEEEeC
Q psy13856 16 MTLKPTLEIETYTESPLR-IGHTLISCDTQAHIGIRST-I---------SLLQGSVYLRRESNKAGALSPKLNRSATSSF 84 (271)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~-~g~~l~s~s~d~~i~lwd~-~---------~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~ 84 (271)
.++...+.-.+......| ++.+|++|+.||+|++||+ . .....|... |.+++|+|++++|++|+.
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSST----VTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSC----EEEEEECTTSSEEEEEET
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCC----EEEEEEeCCCCEEEEEeC
Confidence 334233444556666667 8999999999999999998 1 111267888 999999999999999999
Q ss_pred CCcEEEEEeecCCCCceeeccc-ee----------------eEE--Eeeccceee-----eEEEEeeCCceEEeEEecC-
Q psy13856 85 HEAAKHLGTVQSSSPACLQPKY-FK----------------LTV--YSTKLTRIL-----ILVRICGGDKWIEETKLEN- 139 (271)
Q Consensus 85 d~~i~~~d~~~~~~~~~~~~~~-~~----------------~~~--~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~- 139 (271)
|+.|++||+.....+++..... .. ... +..++..++ +.|++.+....+.+..+.+
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 9999999983211333332221 00 000 112355555 7888833222367778877
Q ss_pred -CCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec-cCCCCeEEEEEec----CCCEEEEEECCCcE
Q psy13856 140 -HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSL----TGDILTVSCGDNSV 213 (271)
Q Consensus 140 -h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~v~~~~----~g~~l~s~s~D~~v 213 (271)
|...|.+++|+| ++.+|++|+.||.|++||++.+.. ...+. .|...|.+++|+| ++.+|++++.|+.|
T Consensus 212 ~h~~~v~~~~~s~----~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 212 PRHGAVSSICIDE----ECCVLILGTTRGIIDIWDIRFNVL--IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp GGGCCEEEEEECT----TSCEEEEEETTSCEEEEETTTTEE--EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred CCCCceEEEEECC----CCCEEEEEcCCCeEEEEEcCCccE--EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 889999999999 699999999999999999998775 45544 7888999996665 57899999999999
Q ss_pred EEEEeCCCCceeEEEEecccchh
Q psy13856 214 SLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 214 ~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
++||++++ +++..+.++...
T Consensus 286 ~iwd~~~~---~~~~~~~~~~~~ 305 (437)
T 3gre_A 286 TIWNFVKG---HCQYAFINSDEQ 305 (437)
T ss_dssp EEEETTTT---EEEEEEESSSSC
T ss_pred EEEEcCCC---cEEEEEEcCCCC
Confidence 99999877 677777766533
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=2.2e-23 Score=188.02 Aligned_cols=190 Identities=14% Similarity=0.159 Sum_probs=147.9
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......+++++|++|+.|++|++||+ ...+.+|... |.+++|+|++++|++|+.|++|++||. .....
T Consensus 434 ~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s~D~~i~iwd~---~~~~~ 506 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD----VLSVAFSLDNRQIVSASRDRTIKLWNT---LGECK 506 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEETTSCEEEECT---TSCEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC----EEEEEEeCCCCEEEEEeCCCEEEEEEC---CCCcc
Confidence 34445679999999999999999998 6778899999 999999999999999999999999997 32222
Q ss_pred eecc----c----eeeEEEeecc--ceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 102 LQPK----Y----FKLTVYSTKL--TRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 102 ~~~~----~----~~~~~~~~~~--~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
.... . .....++..+ ..++ +.|++++....+....+.+|.+.|.+++|+| ++.+|++|+.|
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp----dg~~l~sg~~D 582 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP----DGSLCASGGKD 582 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT----TSSEEEEEETT
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC----CCCEEEEEeCC
Confidence 2111 1 2333444443 2344 7888833333367788999999999999999 69999999999
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
|.|++||+++++. ...+. +...+.+++|+|++.+|++++ |+.|++||++++ ..+..+..+.
T Consensus 583 g~i~iwd~~~~~~--~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~---~~~~~~~~~~ 643 (694)
T 3dm0_A 583 GVVLLWDLAEGKK--LYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESK---SIVEDLKVDL 643 (694)
T ss_dssp SBCEEEETTTTEE--EECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTT---EEEEEECCCC
T ss_pred CeEEEEECCCCce--EEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC---CChhhhcccc
Confidence 9999999998875 44443 456899999999998887776 566999999877 6666665543
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=1.9e-23 Score=175.17 Aligned_cols=183 Identities=14% Similarity=0.040 Sum_probs=147.0
Q ss_pred ceecccCCCCCC-CEEEEccCCCeEEeccc-----eeee--ccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEEee
Q psy13856 24 IETYTESPLRIG-HTLISCDTQAHIGIRST-----ISLL--QGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLGTV 94 (271)
Q Consensus 24 ~~~~~~~~~~~g-~~l~s~s~d~~i~lwd~-----~~~~--~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d~~ 94 (271)
..+......|++ ++|++|+.|+.|++||+ ...+ .+|... |.+++|+| ++++|++++.|+.|++||+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~~l~s~~~d~~i~iwd~- 148 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDA----ITGMKFNQFNTNQLFVSSIRGATTLRDF- 148 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCB----EEEEEEETTEEEEEEEEETTTEEEEEET-
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCc----eeEEEeCCCCCCEEEEEeCCCEEEEEEC-
Confidence 344555566788 89999999999999999 3333 368888 99999999 7899999999999999998
Q ss_pred cCCCCceeecc--------ceeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCc-E
Q psy13856 95 QSSSPACLQPK--------YFKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-M 159 (271)
Q Consensus 95 ~~~~~~~~~~~--------~~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~ 159 (271)
.. ...... ......++.+++.++ +.|++ ...+ ..+..+.+|...|.+++|+| ++. +
T Consensus 149 --~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~h~~~v~~~~~~~----~~~~~ 219 (383)
T 3ei3_B 149 --SG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--HEIFKEKLHKAKVTHAEFNP----RCDWL 219 (383)
T ss_dssp --TS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--CEEEEEECSSSCEEEEEECS----SCTTE
T ss_pred --CC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--CEEEEeccCCCcEEEEEECC----CCCCE
Confidence 43 222222 123455666677777 78888 4444 67888899999999999999 566 9
Q ss_pred EEEEeCCCeEEEEEcCC----CceeeeeeeccCCCCeEEEEEec-CCCEEEEEECCCcEEEEEeCCCCc
Q psy13856 160 IASCSQDRKVIIWTSND----YVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGA 223 (271)
Q Consensus 160 l~s~~~dg~i~iwd~~~----~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~v~iw~~~~~~~ 223 (271)
|++|+.|+.|++||+++ ... ...+ +|...|.+++|+| ++.+|++++.|+.|++||+++...
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSY--IAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCE--EEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEeCCCEEEEEeCCCCCcccce--EEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 99999999999999987 332 3333 7999999999999 999999999999999999987643
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=174.44 Aligned_cols=172 Identities=21% Similarity=0.239 Sum_probs=143.8
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEe
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~ 93 (271)
.-.+......|++++|++|+.||.|++||+ +..+.+|... |.+++|+++ +++|++++.|+.|++||.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCc----EEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 344455555679999999999999999998 5677899999 999999987 899999999999999998
Q ss_pred ecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCC--CcEEEEEeCCCeEEE
Q psy13856 94 VQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLS--KCMIASCSQDRKVII 171 (271)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~--~~~l~s~~~dg~i~i 171 (271)
. .+.+.....+.+|...|.+++|+| + +.+|++++.|+.|++
T Consensus 87 ~---------------------------------~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 87 E---------------------------------NGRWSQIAVHAVHSASVNSVQWAP----HEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp E---------------------------------TTEEEEEEEECCCSSCEEEEEECC----GGGCSEEEEEETTSEEEE
T ss_pred C---------------------------------CCceeEeeeecCCCcceEEEEeCC----CCCCCEEEEecCCCcEEE
Confidence 2 333346677788999999999999 5 899999999999999
Q ss_pred EEcCCCceeeeeeeccCCCCeEEEEEec-------------CCCEEEEEECCCcEEEEEeCCCC-ceeEEEEecccch
Q psy13856 172 WTSNDYVTWTPFIMNTFDDVVWNVSWSL-------------TGDILTVSCGDNSVSLWKENTDG-AWQCITEMGKTSE 235 (271)
Q Consensus 172 wd~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~g~~l~s~s~D~~v~iw~~~~~~-~~~~~~~~~~~~~ 235 (271)
||++.........+..|...|.+++|+| ++.+|++++.|+.|++||++.+. .+.....+.+|..
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp EECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC
Confidence 9999875433556788999999999999 69999999999999999998654 3455566666554
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=1.6e-23 Score=173.73 Aligned_cols=179 Identities=12% Similarity=0.100 Sum_probs=139.2
Q ss_pred ccCCCC-CCCEEEEccCCCeEEeccc-----eeee---ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 28 TESPLR-IGHTLISCDTQAHIGIRST-----ISLL---QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 28 ~~~~~~-~g~~l~s~s~d~~i~lwd~-----~~~~---~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
.....| ++.+|++|+.|+.|++||+ +..+ .+|... |.+++|+|++++|++++.|+.|++||. ..
T Consensus 120 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~i~d~---~~ 192 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE----VLSADYDLLGEKIMSCGMDHSLKLWRI---NS 192 (366)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC----EEEEEECTTSSEEEEEETTSCEEEEES---CS
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc----eeEEEECCCCCEEEEecCCCCEEEEEC---CC
Confidence 334456 8899999999999999998 4444 678888 999999999999999999999999998 44
Q ss_pred Cceeecc---------------------------------ceeeEEEeeccceee-----eEEEE--eeCC---------
Q psy13856 99 PACLQPK---------------------------------YFKLTVYSTKLTRIL-----ILVRI--CGGD--------- 129 (271)
Q Consensus 99 ~~~~~~~---------------------------------~~~~~~~~~~~~~l~-----~~v~i--~~~~--------- 129 (271)
++..... ......+. ++.++ +.+++ ....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccccccc
Confidence 3332111 11122222 55555 67777 2221
Q ss_pred ---ceEEeEEecCCCcceEEEEEccCCCCC--CcEEEEEeCCCeEEEEEcCCCcee--eeeeeccC--CCCeEEEEEecC
Q psy13856 130 ---KWIEETKLENHSDWVRDVAWAPSWGLS--KCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTF--DDVVWNVSWSLT 200 (271)
Q Consensus 130 ---~~~~~~~~~~h~~~v~~v~~~p~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~h--~~~v~~v~~~~~ 200 (271)
....+..+.+|...|.+++|+| + +.+|++|+.||.|++||+++++.. ....+.+| ...|++++|+|+
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 346 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSM----DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD 346 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEE----CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT
T ss_pred CCcchheeccccccCCcEEEEEEcC----CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC
Confidence 1245778888999999999999 6 899999999999999999987532 13356666 789999999999
Q ss_pred CCEEEEEECCCcEEEEEeC
Q psy13856 201 GDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 201 g~~l~s~s~D~~v~iw~~~ 219 (271)
+++|++++.||.|++||+.
T Consensus 347 ~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 347 SSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEEETTSEEEEEEC-
T ss_pred CCeEEEEeCCCEEEEEEec
Confidence 9999999999999999975
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=3.2e-22 Score=164.07 Aligned_cols=203 Identities=13% Similarity=0.088 Sum_probs=158.0
Q ss_pred cceeEEeeceeEeecccc---------------ccceecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccc
Q psy13856 4 KEWLLVSCDGLLMTLKPT---------------LEIETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVY 61 (271)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~ 61 (271)
+..++...||.+..+... ....+......|++++|++++.|+.|++||+ ...+..|..
T Consensus 63 ~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 142 (337)
T 1gxr_A 63 TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP 142 (337)
T ss_dssp SSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSS
T ss_pred CcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCC
Confidence 345666667777665421 1112333444579999999999999999998 345677888
Q ss_pred cccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-c----eeeEEEeeccceee-----eEEEEeeCCce
Q psy13856 62 LRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-Y----FKLTVYSTKLTRIL-----ILVRICGGDKW 131 (271)
Q Consensus 62 ~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~----~~~~~~~~~~~~l~-----~~v~i~~~~~~ 131 (271)
. |.+++|+|+++++++++.|+.|++||. .+++..... . .....++.+++.++ +.+++.+....
T Consensus 143 ~----i~~~~~~~~~~~l~~~~~dg~v~~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 143 A----CYALAISPDSKVCFSCCSDGNIAVWDL---HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp C----EEEEEECTTSSEEEEEETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred c----eEEEEECCCCCEEEEEeCCCcEEEEeC---CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 8 999999999999999999999999998 666555443 1 23445556677776 78888222211
Q ss_pred EEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC
Q psy13856 132 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 211 (271)
Q Consensus 132 ~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~ 211 (271)
+....+. |...+.+++|+| ++.++++++.|+.|++||++..+ ...+..|...|.+++|+|++.+|++++.|+
T Consensus 216 ~~~~~~~-~~~~v~~~~~s~----~~~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 216 RQLQQHD-FTSQIFSLGYCP----TGEWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp EEEEEEE-CSSCEEEEEECT----TSSEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEeeec-CCCceEEEEECC----CCCEEEEEcCCCcEEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 4555544 778899999999 69999999999999999999876 456778999999999999999999999999
Q ss_pred cEEEEEeCCC
Q psy13856 212 SVSLWKENTD 221 (271)
Q Consensus 212 ~v~iw~~~~~ 221 (271)
.|++|++.++
T Consensus 288 ~i~~~~~~~~ 297 (337)
T 1gxr_A 288 LLNAWRTPYG 297 (337)
T ss_dssp EEEEEETTTC
T ss_pred cEEEEECCCC
Confidence 9999999876
No 52
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=8.4e-23 Score=173.61 Aligned_cols=208 Identities=14% Similarity=0.130 Sum_probs=147.1
Q ss_pred CcceeEEeeceeEeecccc------------ccceecccCCCCCCCEEEEccCCCeEEeccc-----e------------
Q psy13856 3 SKEWLLVSCDGLLMTLKPT------------LEIETYTESPLRIGHTLISCDTQAHIGIRST-----I------------ 53 (271)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~------------ 53 (271)
+...|.+..|+.+..+... ....+.+....|+|++|++|+.||.|++||+ +
T Consensus 115 ~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 115 SGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 3445666667666655311 1112344555679999999999999999997 2
Q ss_pred -----------------------------eeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc-eee
Q psy13856 54 -----------------------------SLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA-CLQ 103 (271)
Q Consensus 54 -----------------------------~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~-~~~ 103 (271)
..+.+|... +..+.|+|+++++++++.|+.+++|+...++... .+.
T Consensus 195 ~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~----~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 195 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE----VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC----EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred EeeCCCEEEEEeCCCceeEeeecccceeeEEecccccc----eeeeeecCCCCeeeeeeccccceEEeeccccccceeee
Confidence 223445555 7778899999999999999999999984322111 111
Q ss_pred cc-----ceeeEEEeecc-ceee-------eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe--CCCe
Q psy13856 104 PK-----YFKLTVYSTKL-TRIL-------ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--QDRK 168 (271)
Q Consensus 104 ~~-----~~~~~~~~~~~-~~l~-------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~--~dg~ 168 (271)
.. ......++... ..++ +.|++++.........+..| ..+.++.|+| ++..+++++ .|+.
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~----~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSP----HYKELISGHGFAQNQ 345 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEET----TTTEEEEEECTTTCC
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecC----CCCeEEEEEecCCCE
Confidence 11 11333444443 3333 67888332222666666644 6788999999 467776654 7999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|++||+.+++. +..+.+|.+.|++++|+|+|.+|++|+.|++|+|||+...
T Consensus 346 I~iwd~~~~~~--v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 346 LVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999887 7788999999999999999999999999999999998754
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=7.3e-23 Score=167.86 Aligned_cols=176 Identities=13% Similarity=0.121 Sum_probs=145.0
Q ss_pred ccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCcee
Q psy13856 28 TESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACL 102 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~ 102 (271)
.....|+++++++++.|+.|++||+ ...+..|... |.+++|+|++++|++++.|+.|++||. ++++..
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~dg~i~~~d~---~~~~~~ 218 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISNDGTKLWTGGLDNTVRSWDL---REGRQL 218 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TTTEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc----eEEEEECCCCCEEEEEecCCcEEEEEC---CCCceE
Confidence 3344579999999999999999998 6677889998 999999999999999999999999998 666665
Q ss_pred eccce----eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEE
Q psy13856 103 QPKYF----KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 172 (271)
Q Consensus 103 ~~~~~----~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iw 172 (271)
..... ....++.+++.++ +.+++ .... .....+..|...|.+++|+| ++.+|++++.||.|++|
T Consensus 219 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 219 QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK--PDKYQLHLHESCVLSLKFAY----CGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--SCEEEECCCSSCEEEEEECT----TSSEEEEEETTSEEEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CCeEEEcCCccceeEEEECC----CCCEEEEecCCCcEEEE
Confidence 54422 3445556677776 66777 2222 22346778999999999999 69999999999999999
Q ss_pred EcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 173 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 173 d~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
|+.+++. .....|...+.+++|+|++++|++++.||.|++|++.
T Consensus 293 ~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 293 RTPYGAS---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ETTTCCE---EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ECCCCeE---EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9998774 2445688899999999999999999999999999974
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=3.1e-23 Score=175.68 Aligned_cols=179 Identities=9% Similarity=-0.023 Sum_probs=141.8
Q ss_pred CCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-
Q psy13856 32 LRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK- 105 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~- 105 (271)
.+++++|++|+.|+.|++||+ ...+.+|... |.+++|+|++++|++|+.|+.|++||+ .++++....
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~s~d~~i~iwd~---~~~~~~~~~~ 178 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSE----ITKLKFFPSGEALISSSQDMQLKIWSV---KDGSNPRTLI 178 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TTCCCCEEEE
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeecccccCc----cEEEEECCCCCEEEEEeCCCeEEEEeC---CCCcCceEEc
Confidence 479999999999999999998 5566799999 999999999999999999999999999 555444433
Q ss_pred ----ceeeEEEeeccceee-----eEEEEeeCCceEEeEEecC---CCcceEEEEE---------------------ccC
Q psy13856 106 ----YFKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLEN---HSDWVRDVAW---------------------APS 152 (271)
Q Consensus 106 ----~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~---h~~~v~~v~~---------------------~p~ 152 (271)
......++.+++.++ +.+++++....+....+.. |...+.+++| +|
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~- 257 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT- 257 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-
Confidence 224455666777777 7788832222256666654 4445555554 56
Q ss_pred CCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEECCCcEEEEEeCCCC
Q psy13856 153 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 153 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~v~iw~~~~~~ 222 (271)
++.+|++|+.||.|++||++++... ......|...|.+++|+|++. +|++++.||.|++||++++.
T Consensus 258 ---~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 258 ---YGKYVIAGHVSGVITVHNVFSKEQT-IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp ---TTEEEEEEETTSCEEEEETTTCCEE-EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ---CCCEEEEEcCCCeEEEEECCCCcee-EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 6899999999999999999987752 334456889999999999998 99999999999999998753
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=3.6e-23 Score=169.93 Aligned_cols=165 Identities=13% Similarity=0.172 Sum_probs=131.7
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcC--CCCeEEEEeCCCcEEEE
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSP--KLNRSATSSFHEAAKHL 91 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~~~ 91 (271)
.-.+......|++.+|++|+.||.|++||+ ...+.+|... |.+++|+| ++++|++++.|+.|++|
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS----IVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC----EEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc----EEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 344555555679999999999999999997 4455789999 99999999 69999999999999999
Q ss_pred EeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCC--CcEEEEEeCCCeE
Q psy13856 92 GTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLS--KCMIASCSQDRKV 169 (271)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~--~~~l~s~~~dg~i 169 (271)
|.. .+.... ....+.....+.+|...|.+++|+| + +.+|++++.||.|
T Consensus 87 d~~---~~~~~~-----------------------~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 87 EED---PDQEEC-----------------------SGRRWNKLCTLNDSKGSLYSVKFAP----AHLGLKLACLGNDGIL 136 (351)
T ss_dssp EEC---TTSCTT-----------------------SSCSEEEEEEECCCSSCEEEEEECC----GGGCSEEEEEETTCEE
T ss_pred ecC---CCcccc-----------------------cccCcceeeeecccCCceeEEEEcC----CCCCcEEEEecCCCcE
Confidence 983 322111 0112356677778999999999999 6 8899999999999
Q ss_pred EEEEcCCCce----------------------------------------------------------eeeeeeccCCCC
Q psy13856 170 IIWTSNDYVT----------------------------------------------------------WTPFIMNTFDDV 191 (271)
Q Consensus 170 ~iwd~~~~~~----------------------------------------------------------~~~~~~~~h~~~ 191 (271)
++||+++... .....+.+|...
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 9999865431 013345578999
Q ss_pred eEEEEEecCC----CEEEEEECCCcEEEEEeCCC
Q psy13856 192 VWNVSWSLTG----DILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 192 v~~v~~~~~g----~~l~s~s~D~~v~iw~~~~~ 221 (271)
|++++|+|++ .+|++++.|+.|++||++..
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 9999999998 89999999999999999754
No 56
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.5e-23 Score=169.40 Aligned_cols=185 Identities=15% Similarity=0.092 Sum_probs=147.5
Q ss_pred ceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 24 IETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 24 ~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
-.+......|++.+|++|+.||.|++||+ +..+.+|... |.+++|+|++++|++++.|+.|++||+ .+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~dg~i~iwd~---~~ 105 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCFTKYCVTGSADYSIKLWDV---SN 105 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEETTTEEEEEET---TT
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCCCCEEEEEeCCCeEEEEEC---CC
Confidence 33444455569999999999999999998 7788899999 999999999999999999999999998 66
Q ss_pred Cceeeccc----eeeEEEeeccceee----------eEEEE--eeCC-c--------eEEeEEecCCCc--ceEEEEEcc
Q psy13856 99 PACLQPKY----FKLTVYSTKLTRIL----------ILVRI--CGGD-K--------WIEETKLENHSD--WVRDVAWAP 151 (271)
Q Consensus 99 ~~~~~~~~----~~~~~~~~~~~~l~----------~~v~i--~~~~-~--------~~~~~~~~~h~~--~v~~v~~~p 151 (271)
+++..... .....++.+++.++ +.+.+ .... . ......+..|.. .+.+++|+|
T Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 106 GQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp CCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred CcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 66655542 23445555666655 35555 1111 0 013344455665 899999999
Q ss_pred CCCCCCcEEEEEeCCCeEEEEEcCC-CceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 152 SWGLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 152 ~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
++.+|++++.||.|++||+++ ... ...+..|...|.+++|+|++.+|++++.|+.|++||+++.
T Consensus 186 ----~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 186 ----KGKYIIAGHKDGKISKYDVSNNYEY--VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp ----GGCEEEEEETTSEEEEEETTTTTEE--EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ----CCCEEEEEcCCCEEEEEECCCCcEe--EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 699999999999999999998 443 6778889999999999999999999999999999999876
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.7e-23 Score=172.22 Aligned_cols=192 Identities=10% Similarity=0.043 Sum_probs=152.5
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
+......|++++|++|+.|+.|++||. +..+..|... |.+++|+|++++|++++.|+.+++|+. .++..
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~iwd~---~~~~~ 183 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAP----IVSVKWNKDGTHIISMDVENVTILWNV---ISGTV 183 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSC----EEEEEECTTSSEEEEEETTCCEEEEET---TTTEE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCcc----EEEEEECCCCCEEEEEecCCeEEEEEC---CCCcE
Confidence 444445679999999999999999997 6778889999 999999999999999999999999998 66655
Q ss_pred eeccc--------------------eeeEEEeeccceee----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCC
Q psy13856 102 LQPKY--------------------FKLTVYSTKLTRIL----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSK 157 (271)
Q Consensus 102 ~~~~~--------------------~~~~~~~~~~~~l~----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 157 (271)
..... .....+...+..++ +.+++.+.........+.+|...|.+++|+| ++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~----~~ 259 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND----TN 259 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET----TT
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC----CC
Confidence 54431 11222333333333 6677722221256677888999999999999 68
Q ss_pred cEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 158 CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 158 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
.+|++++.|+.|++||+++.+. ...+..|...|.+++|+|++ ++++++.|+.|++||++++ +.+..+..+.
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~ 330 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN---TLLALSIVDG 330 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT---EEEEEEECTT
T ss_pred CEEEEEcCCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC---cEeEecccCC
Confidence 9999999999999999998776 66778899999999999999 9999999999999999876 5555555443
No 58
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=2.1e-22 Score=165.51 Aligned_cols=184 Identities=16% Similarity=0.144 Sum_probs=136.9
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......|+|++|++|+.|+.|++|+. ......+... +....+++++..|++++.|+.+++||. .....
T Consensus 90 ~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~s~s~d~~~~~~d~---~~~~~ 162 (340)
T 4aow_A 90 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD----VLSVAFSSDNRQIVSGSRDKTIKLWNT---LGVCK 162 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTSSCEEEEETTSCEEEECT---TSCEE
T ss_pred EEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc----eeEEEEeecCccceeecCCCeEEEEEe---CCCce
Confidence 33444579999999999999999999 4455566666 788999999999999999999999997 33322
Q ss_pred eecc--ce----eeEEEeecc--ceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 102 LQPK--YF----KLTVYSTKL--TRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 102 ~~~~--~~----~~~~~~~~~--~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
.... .+ ....+.... ..++ +.+++.+....+....+.+|.+.|.+++|+| ++.+|++|+.|+.
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~----~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP----DGSLCASGGKDGQ 238 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT----TSSEEEEEETTCE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC----CCCEEEEEeCCCe
Confidence 2211 11 223333332 2333 6677733333377888999999999999999 6999999999999
Q ss_pred EEEEEcCCCceee--------------------------------------ee---------eeccCCCCeEEEEEecCC
Q psy13856 169 VIIWTSNDYVTWT--------------------------------------PF---------IMNTFDDVVWNVSWSLTG 201 (271)
Q Consensus 169 i~iwd~~~~~~~~--------------------------------------~~---------~~~~h~~~v~~v~~~~~g 201 (271)
|++||+++..... .. ...+|...|++++|+|+|
T Consensus 239 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 239 AMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred EEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 9999988643200 00 112567789999999999
Q ss_pred CEEEEEECCCcEEEEEeCCC
Q psy13856 202 DILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 202 ~~l~s~s~D~~v~iw~~~~~ 221 (271)
++|++|+.||.|+|||++++
T Consensus 319 ~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 319 QTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SEEEEEETTSCEEEEEEEC-
T ss_pred CEEEEEeCCCEEEEEeCCCc
Confidence 99999999999999999876
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=1.3e-22 Score=168.91 Aligned_cols=194 Identities=10% Similarity=0.024 Sum_probs=152.0
Q ss_pred ccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 28 TESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
.....|++++|++++.|+.|++||+ ...+..|... |.+++|+|++++|++++.|+.+++|+........
T Consensus 57 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRA----ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW 132 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSC----EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCc----eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce
Confidence 3334579999999999999999998 2234678888 9999999999999999999999999995322111
Q ss_pred eeecc------ceeeEEEeeccceee-----eEEEEee------------------CCceEEeEEecCCCcceEEEEEcc
Q psy13856 101 CLQPK------YFKLTVYSTKLTRIL-----ILVRICG------------------GDKWIEETKLENHSDWVRDVAWAP 151 (271)
Q Consensus 101 ~~~~~------~~~~~~~~~~~~~l~-----~~v~i~~------------------~~~~~~~~~~~~h~~~v~~v~~~p 151 (271)
..... ......++.+++.++ +.+++.+ ......+..+.+|...|.+++|+|
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 12111 224445566677776 6777732 111267788889999999999999
Q ss_pred CCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC-CCceeEEEEe
Q psy13856 152 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT-DGAWQCITEM 230 (271)
Q Consensus 152 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~-~~~~~~~~~~ 230 (271)
++.+|++++.|+.|++||+++++. ...+..|...|.+++|+|++.+|+++ .|+.|++|+++. .+.|..+..+
T Consensus 213 ----~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 213 ----NGSRVAWVSHDSTVCLADADKKMA--VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp ----SSSEEEEEETTTEEEEEEGGGTTE--EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred ----CCCEEEEEeCCCEEEEEECCCCce--eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence 689999999999999999998876 67788899999999999999988888 899999999986 2567776665
Q ss_pred cc
Q psy13856 231 GK 232 (271)
Q Consensus 231 ~~ 232 (271)
..
T Consensus 286 ~~ 287 (372)
T 1k8k_C 286 DV 287 (372)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=4.2e-23 Score=174.90 Aligned_cols=184 Identities=11% Similarity=-0.001 Sum_probs=139.9
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......|++++|++|+.|+.|++||+ +..+.+|... |.+++|+|++++|++++.|++|++||. .+++
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~d~~v~iwd~---~~~~ 214 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT----VTDIAIIDRGRNVLSASLDGTIRLWEC---GTGT 214 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC----EEEEEEETTTTEEEEEETTSCEEEEET---TTTE
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc----EEEEEEcCCCCEEEEEcCCCcEEEeEC---CCCc
Confidence 344445679999999999999999998 6778899999 999999999999999999999999998 6665
Q ss_pred eeeccce--------eeE---------------------EEeeccceee-----eEEEEeeCCceEEeEE-ecCCCcceE
Q psy13856 101 CLQPKYF--------KLT---------------------VYSTKLTRIL-----ILVRICGGDKWIEETK-LENHSDWVR 145 (271)
Q Consensus 101 ~~~~~~~--------~~~---------------------~~~~~~~~l~-----~~v~i~~~~~~~~~~~-~~~h~~~v~ 145 (271)
+...... ... .++.+++.++ +.+++.+......... ..+|...|.
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 5544311 111 1223455555 6777722111133333 456889999
Q ss_pred EEEEccCCCCCCc-EEEEEeCCCeEEEEEcCCCceeeeeeecc-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 146 DVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 146 ~v~~~p~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
+++|+| ++. +|++|+.||.|++||++++... ...+.. |...+.++.| +++.+|++++.|+.|++|++....
T Consensus 295 ~~~~~~----~~~~~l~~g~~dg~i~vwd~~~~~~~-~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 295 SLTVDG----NNANYIYAGYENGMLAQWDLRSPECP-VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp EEEECS----SCTTEEEEEETTSEEEEEETTCTTSC-SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred eEEEeC----CCCCEEEEEeCCCeEEEEEcCCCcCc-hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 999999 466 9999999999999999987542 344554 6778888855 578899999999999999998643
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.5e-23 Score=182.59 Aligned_cols=173 Identities=9% Similarity=-0.041 Sum_probs=134.3
Q ss_pred CCCEEEEccCCCeEEeccc--e--------------eeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 34 IGHTLISCDTQAHIGIRST--I--------------SLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~--~--------------~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
++.+||+|+.||+|++||+ . ..+.+|... |.+++|+++ ..|++|+.||+|++||+ +
T Consensus 224 ~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~----v~sv~~s~~-~~lasgs~DgtV~lWD~---~ 295 (524)
T 2j04_B 224 LVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSL----ITTFDFLSP-TTVVCGFKNGFVAEFDL---T 295 (524)
T ss_dssp SSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTC----EEEEEESSS-SEEEEEETTSEEEEEET---T
T ss_pred CCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCC----EEEEEecCC-CeEEEEeCCCEEEEEEC---C
Confidence 4689999999999999998 1 145678888 999999986 48999999999999998 4
Q ss_pred CCce-eecc-ce----eeE--EEeecc-ceee-----eEEEEeeCCceEEeEEecCCCc--ceEEEEEccCCCCCCcEEE
Q psy13856 98 SPAC-LQPK-YF----KLT--VYSTKL-TRIL-----ILVRICGGDKWIEETKLENHSD--WVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 98 ~~~~-~~~~-~~----~~~--~~~~~~-~~l~-----~~v~i~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~~~~l~ 161 (271)
++.. .... .+ ... .+..++ ..++ +.+++++....++...+.+|.. .|.+++|+| ++..++
T Consensus 296 ~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp----~~~~l~ 371 (524)
T 2j04_B 296 DPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP----QIYSYI 371 (524)
T ss_dssp BCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET----TTTEEE
T ss_pred CCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC----CcCeEE
Confidence 3322 1111 22 222 233445 5666 8899933222244445556653 588999999 688999
Q ss_pred EEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
+++.|++|++||++.+.+ ...+.+|.+.|++|+|+|+|.+|++|+.|++|++|++..
T Consensus 372 s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 999999999999998876 566788999999999999999999999999999999753
No 62
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.3e-23 Score=189.52 Aligned_cols=173 Identities=9% Similarity=0.067 Sum_probs=125.7
Q ss_pred CCCCCCCEEEEccCCCeEEeccc----e---eeec---------cccccccccceEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST----I---SLLQ---------GSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~----~---~~~~---------~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~ 93 (271)
...|++++|++|+.|++|++||+ + ..+. +|... |++++|+|++++||+|+.|++|++|+.
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~----V~svafspdg~~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA----VDKISFAAETLELAVSIETGDVVLFKY 517 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC----EEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc----eeEEEecCCCCeEEEEecCcEEEEEEe
Confidence 34579999999999999999998 1 1111 67778 999999999999999999999999998
Q ss_pred ecCCCCceeec----------cceeeEEEeec-cceeeeEEEE-e-e----CCceEEeEEecCCCcceEEEEEccCCCCC
Q psy13856 94 VQSSSPACLQP----------KYFKLTVYSTK-LTRILILVRI-C-G----GDKWIEETKLENHSDWVRDVAWAPSWGLS 156 (271)
Q Consensus 94 ~~~~~~~~~~~----------~~~~~~~~~~~-~~~l~~~v~i-~-~----~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 156 (271)
.. ++.... ..+.. +... +.. +...+ . . ...++++..+.+|.+.|++|+|+| |
T Consensus 518 ~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp----d 586 (902)
T 2oaj_A 518 EV---NQFYSVENRPESGDLEMNFRR--FSLNNTNG--VLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN----I 586 (902)
T ss_dssp EE---CCC---------------CCS--CCGGGSSC--SEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB----T
T ss_pred cC---ccccCccccCCCcccceeeee--ccccCCcc--ccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC----C
Confidence 43 211000 00000 0000 000 00001 0 0 001356788899999999999999 7
Q ss_pred CcEEEEEeCCCeEEEEEcCCCceee---eeeec-cCCCCeEEEEEe-----cCC---CEEEEEECCCcEEEEEe
Q psy13856 157 KCMIASCSQDRKVIIWTSNDYVTWT---PFIMN-TFDDVVWNVSWS-----LTG---DILTVSCGDNSVSLWKE 218 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~-~h~~~v~~v~~~-----~~g---~~l~s~s~D~~v~iw~~ 218 (271)
| +||+|+.|++|++||++...... ...+. +|.+.|++|+|+ ||| .+|++|+.|++|++||+
T Consensus 587 G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 587 G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 8 99999999999999998765321 11233 899999999999 885 89999999999999999
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6e-23 Score=189.67 Aligned_cols=185 Identities=9% Similarity=-0.001 Sum_probs=144.2
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
...+......|++++||+|+.||.|++|+. ......|... |.+++|+| +++|++++.|++|++||+ .+
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~----V~~l~fsp-g~~L~S~s~D~~v~lWd~---~~ 88 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSA----IKEMRFVK-GIYLVVINAKDTVYVLSL---YS 88 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCC----EEEEEEET-TTEEEEEETTCEEEEEET---TT
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCC----EEEEEEcC-CCEEEEEECcCeEEEEEC---CC
Confidence 344555666679999999999999999998 2222356777 99999999 889999999999999999 66
Q ss_pred Cceeeccce----eeEEEeeccceee-----eEEEEe--eCCceEEe---------EEecCCCcceEEEEEccCCCCCCc
Q psy13856 99 PACLQPKYF----KLTVYSTKLTRIL-----ILVRIC--GGDKWIEE---------TKLENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 99 ~~~~~~~~~----~~~~~~~~~~~l~-----~~v~i~--~~~~~~~~---------~~~~~h~~~v~~v~~~p~~~~~~~ 158 (271)
++++....+ ....++.++++++ +.|+++ ..+..... ..+.+|.+.|.+++|+|. ++.
T Consensus 89 ~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~---~~~ 165 (902)
T 2oaj_A 89 QKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR---DIG 165 (902)
T ss_dssp CSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT---EEE
T ss_pred CcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC---CCC
Confidence 666655422 3444556677777 788882 23311111 234679999999999995 468
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeeeeeccC------------------CCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 159 MIASCSQDRKVIIWTSNDYVTWTPFIMNTF------------------DDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h------------------~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
.+++|+.|+.| +||+++.+. ...+..| ...|++++|+|+|.+|++++.|++|++||+++
T Consensus 166 ~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred EEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 99999999999 999998775 4444443 57899999999999999999999999999987
Q ss_pred C
Q psy13856 221 D 221 (271)
Q Consensus 221 ~ 221 (271)
+
T Consensus 243 g 243 (902)
T 2oaj_A 243 G 243 (902)
T ss_dssp C
T ss_pred C
Confidence 6
No 64
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=1.8e-22 Score=163.82 Aligned_cols=169 Identities=9% Similarity=-0.000 Sum_probs=127.6
Q ss_pred CCCCEEEEcc--CCCeEEeccc------eeeeccccccccccceEEEEcC---CCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 33 RIGHTLISCD--TQAHIGIRST------ISLLQGSVYLRRESNKAGALSP---KLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 33 ~~g~~l~s~s--~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~~s~---~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
++|+++.+++ .|+.|++|++ +..+.+|... +..++|++ ++..|++++.|++|++||. +++++
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~----v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl---~TGk~ 215 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE----ETILTFAEVQGMQEALLGTTIMNNIVIWNL---KTGQL 215 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS----SCEEEEEEEETSTTEEEEEETTSEEEEEET---TTCCE
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc----eeeEEeeccCCCCceEEEecCCCcEEEEEC---CCCcE
Confidence 4566666643 6899999998 5666788888 99999999 7799999999999999999 88888
Q ss_pred eeccc-e-------eeEEEeecccee------------e-----eEEEE--eeCCceEEeEEe-----cCCCcceEEEEE
Q psy13856 102 LQPKY-F-------KLTVYSTKLTRI------------L-----ILVRI--CGGDKWIEETKL-----ENHSDWVRDVAW 149 (271)
Q Consensus 102 ~~~~~-~-------~~~~~~~~~~~l------------~-----~~v~i--~~~~~~~~~~~~-----~~h~~~v~~v~~ 149 (271)
+..+. . ....+++++..+ + +++++ ..++ +.+..+ .+|...+.+..+
T Consensus 216 l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg--k~l~v~~~~~p~Gh~~~~lsg~~ 293 (356)
T 2w18_A 216 LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT--LSVGVMLYCLPPGQAGRFLEGDV 293 (356)
T ss_dssp EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT--EEEEEEEECCCTTCCCCEEEEEE
T ss_pred EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC--EEEEEEEeeccCCCcceeEcccc
Confidence 77662 1 123466666654 2 66777 2333 343333 366555443333
Q ss_pred ccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeE-EEEEecCCCEEEEEECCCcEEEEEe
Q psy13856 150 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW-NVSWSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 150 ~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~v~~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
++.++++|+.|++|+|||+.++++ ...+.+|...+. +++|+|+|++|++|+.|++|+|||+
T Consensus 294 ------sg~~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 ------KDHCAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ------ETTEEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ------CCCEEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 356899999999999999999987 778888987665 5899999999999999999999996
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.6e-22 Score=160.62 Aligned_cols=192 Identities=10% Similarity=0.058 Sum_probs=150.0
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+..... +++.+|++|+.||.|++||+ ...+..|... |.+++|+|+++++++++.|+.+++|++......+
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 333334 78999999999999999998 6667888888 9999999999999999999999999986444334
Q ss_pred eeecc-ce--eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEE
Q psy13856 101 CLQPK-YF--KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 172 (271)
Q Consensus 101 ~~~~~-~~--~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iw 172 (271)
..... .+ .......++..++ +.+++.+.+ .....+..|...+.++.|.|. ++.++++++.|+.|++|
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEG--SLVYNLQAHNASVWDAKVVSF---SENKFLTASADKTIKLW 170 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETT--EEEEEEECCSSCEEEEEEEET---TTTEEEEEETTSCEEEE
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCC--cEEEecccCCCceeEEEEccC---CCCEEEEEECCCCEEEE
Confidence 33332 12 2222222455665 788885555 778888899999999999985 68999999999999999
Q ss_pred EcCCCceeeeeeecc-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 173 TSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 173 d~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
|.. .. ...+.. |...+.+++|+|++. +++++.|+.|++||++++ +.+..+..|..
T Consensus 171 d~~--~~--~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~---~~~~~~~~~~~ 226 (313)
T 3odt_A 171 QND--KV--IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG---DVLRTYEGHES 226 (313)
T ss_dssp ETT--EE--EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC---CEEEEEECCSS
T ss_pred ecC--ce--EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch---hhhhhhhcCCc
Confidence 943 22 444555 889999999999988 999999999999999876 55666665543
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=6.7e-23 Score=173.20 Aligned_cols=198 Identities=13% Similarity=0.145 Sum_probs=151.1
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcCC-CCeEEEEeCCCcEEEEEeecC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSPK-LNRSATSSFHEAAKHLGTVQS 96 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~~~d~~~~ 96 (271)
......|++.+|++|+.|+.|++||+ +..+.+|... |.+++|+|+ +++|++++.|+.|++||....
T Consensus 71 ~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 71 NDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSS----VKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp EEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSC----CCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred EEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccc----eEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 34444579999999999999999998 4456788888 999999998 899999999999999998432
Q ss_pred C------CCceeec-c----ceeeEEEeec-cceee-----eEEEEeeCCceEEeEEecCC------CcceEEEEEccCC
Q psy13856 97 S------SPACLQP-K----YFKLTVYSTK-LTRIL-----ILVRICGGDKWIEETKLENH------SDWVRDVAWAPSW 153 (271)
Q Consensus 97 ~------~~~~~~~-~----~~~~~~~~~~-~~~l~-----~~v~i~~~~~~~~~~~~~~h------~~~v~~v~~~p~~ 153 (271)
. ....... . ......++.+ +..++ +.|++.+....+....+..| ...|.+++|+|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 225 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK- 225 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS-
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC-
Confidence 2 1111100 1 2244556665 45555 77888322222666677665 788999999995
Q ss_pred CCCCcEEEEEeCCC---eEEEEEcCCCceeeeeeec-cCCCCeEEEEEec-CCCEEEEEECCCcEEEEEeCCCCceeEEE
Q psy13856 154 GLSKCMIASCSQDR---KVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGAWQCIT 228 (271)
Q Consensus 154 ~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~-~h~~~v~~v~~~~-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~ 228 (271)
+..++++++.|+ .|++||+++.... ...+. +|...|.+++|+| ++.+|++++.|+.|++||++++ +.+.
T Consensus 226 --~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~---~~~~ 299 (416)
T 2pm9_A 226 --NSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA---EQLS 299 (416)
T ss_dssp --CTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC---CEEE
T ss_pred --CCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC---ccce
Confidence 347999999999 9999999986321 55666 8999999999999 8999999999999999999876 5666
Q ss_pred Eecccch
Q psy13856 229 EMGKTSE 235 (271)
Q Consensus 229 ~~~~~~~ 235 (271)
.+..|..
T Consensus 300 ~~~~~~~ 306 (416)
T 2pm9_A 300 QFPARGN 306 (416)
T ss_dssp EEECSSS
T ss_pred eecCCCC
Confidence 6666543
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=5.4e-22 Score=170.38 Aligned_cols=185 Identities=12% Similarity=0.120 Sum_probs=148.2
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccc-e
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKY-F 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~-~ 107 (271)
++.+|++|+.||.|++||. +..+.+|.+. |.+++|+|++ .+++|+.|++|++||. .++++..... +
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~----V~~l~~~~~~-~l~s~s~dg~i~vwd~---~~~~~~~~~~~h 202 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGG----VWALKYAHGG-ILVSGSTDRTVRVWDI---KKGCCTHVFEGH 202 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECSTT-EEEEEETTSCEEEEET---TTTEEEEEECCC
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcC----EEEEEEcCCC-EEEEEeCCCCEEEEEC---CCCcEEEEECCC
Confidence 6789999999999999998 7778899999 9999999988 9999999999999999 6666665542 2
Q ss_pred ----eeEEEe--eccceee-----eEEEE-e-eCCce---------------------EEeEEecCCCcceEEEEEccCC
Q psy13856 108 ----KLTVYS--TKLTRIL-----ILVRI-C-GGDKW---------------------IEETKLENHSDWVRDVAWAPSW 153 (271)
Q Consensus 108 ----~~~~~~--~~~~~l~-----~~v~i-~-~~~~~---------------------~~~~~~~~h~~~v~~v~~~p~~ 153 (271)
....+. .++..++ +.+++ . ..... .....+.+|...+.++. +
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-- 278 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-- 278 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E--
T ss_pred CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C--
Confidence 222233 2345555 66777 1 11100 02567788999998884 4
Q ss_pred CCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 154 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 154 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
++.++++|+.|+.|++||+++++. ...+.+|...|.+++|+|++.++++++.|+.|++||++++ +++..+.+|
T Consensus 279 --~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h 351 (464)
T 3v7d_B 279 --HGNIVVSGSYDNTLIVWDVAQMKC--LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG---ELMYTLQGH 351 (464)
T ss_dssp --ETTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT---EEEEEECCC
T ss_pred --CCCEEEEEeCCCeEEEEECCCCcE--EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---cEEEEEeCC
Confidence 478999999999999999998876 6778899999999999999999999999999999999877 677777776
Q ss_pred chhh
Q psy13856 234 SEQR 237 (271)
Q Consensus 234 ~~~~ 237 (271)
....
T Consensus 352 ~~~v 355 (464)
T 3v7d_B 352 TALV 355 (464)
T ss_dssp SSCE
T ss_pred CCcE
Confidence 6543
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=1.8e-22 Score=166.92 Aligned_cols=181 Identities=8% Similarity=0.018 Sum_probs=136.8
Q ss_pred CCCCCEEEEccCCCeEEeccc------eeeeccccccccccceEEE----EcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 32 LRIGHTLISCDTQAHIGIRST------ISLLQGSVYLRRESNKAGA----LSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~----~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
.+++.+|++|+.|+.|++||+ ...+..|.+.....+.+++ |+|+++++++++.|+.|++||. +.++.
T Consensus 126 s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~---~~~~~ 202 (357)
T 3i2n_A 126 GEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDL---RNMAL 202 (357)
T ss_dssp C-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEET---TTTEE
T ss_pred CCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEEC---ccCce
Confidence 578999999999999999998 4455555542222388888 7889999999999999999998 65555
Q ss_pred eeccc----eeeEEEee---ccceee-----eEEEE--eeCCceEEe-----EEecCCCcceEEEEEccCCCCCCc-EEE
Q psy13856 102 LQPKY----FKLTVYST---KLTRIL-----ILVRI--CGGDKWIEE-----TKLENHSDWVRDVAWAPSWGLSKC-MIA 161 (271)
Q Consensus 102 ~~~~~----~~~~~~~~---~~~~l~-----~~v~i--~~~~~~~~~-----~~~~~h~~~v~~v~~~p~~~~~~~-~l~ 161 (271)
..... .....++. ++..++ +.+++ ...+ ... ..+.+|...|.+++|+| ++. +|+
T Consensus 203 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~ 276 (357)
T 3i2n_A 203 RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ--HPTKGFASVSEKAHKSTVWQVRHLP----QNRELFL 276 (357)
T ss_dssp EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE--ETTTEEEEEEEECCSSCEEEEEEET----TEEEEEE
T ss_pred eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC--CcccceeeeccCCCcCCEEEEEECC----CCCcEEE
Confidence 44332 23445555 566666 67777 2222 222 23458999999999999 566 899
Q ss_pred EEeCCCeEEEEEcCCCcee-----------------eeeeeccCCCCeEEEEEecCCCEEE-EEECCCcEEEEEeCCC
Q psy13856 162 SCSQDRKVIIWTSNDYVTW-----------------TPFIMNTFDDVVWNVSWSLTGDILT-VSCGDNSVSLWKENTD 221 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~-----------------~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~D~~v~iw~~~~~ 221 (271)
+|+.||.|++||++.+... ....+.+|...|.+++|+|++.+|+ +++.|+.|++|++...
T Consensus 277 ~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 277 TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999999999999864321 2556778999999999999999998 8999999999999754
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=4.7e-22 Score=167.08 Aligned_cols=189 Identities=14% Similarity=0.080 Sum_probs=146.8
Q ss_pred cCCCCC----C---CEEEEccCCCeEEeccc----------eeeeccc-----cccccccceEEEEc----CCCCe-EEE
Q psy13856 29 ESPLRI----G---HTLISCDTQAHIGIRST----------ISLLQGS-----VYLRRESNKAGALS----PKLNR-SAT 81 (271)
Q Consensus 29 ~~~~~~----g---~~l~s~s~d~~i~lwd~----------~~~~~~h-----~~~~~~~i~~~~~s----~~~~~-l~s 81 (271)
....++ + .+|++++.|+.|++||+ ...+..| ... |.+++|+ |+++. |++
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~l~~ 143 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS----FWALKWGASNDRLLSHRLVA 143 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSC----EEEEEEECCC----CEEEEE
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCc----EEEEEEeeccCCCCceEEEE
Confidence 334467 8 99999999999999998 2445667 466 9999999 99999 999
Q ss_pred EeCCCcEEEEEeec------CCCCc-----eee---------ccceeeEEEeeccceee-----eEEEEeeCCceEEeEE
Q psy13856 82 SSFHEAAKHLGTVQ------SSSPA-----CLQ---------PKYFKLTVYSTKLTRIL-----ILVRICGGDKWIEETK 136 (271)
Q Consensus 82 ~s~d~~i~~~d~~~------~~~~~-----~~~---------~~~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~ 136 (271)
++.|+.|++||... ..... .+. ........++.++ .++ +.+++.+....+.+..
T Consensus 144 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~ 222 (397)
T 1sq9_A 144 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN 222 (397)
T ss_dssp EETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE
T ss_pred EeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE
Confidence 99999999999953 22222 221 1122445566667 666 7888832222267788
Q ss_pred ecC---C---CcceEEEEEccCCCCCCcEEEEEeCC---CeEEEEEcCCCceeeeeeecc-------------CCCCeEE
Q psy13856 137 LEN---H---SDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNT-------------FDDVVWN 194 (271)
Q Consensus 137 ~~~---h---~~~v~~v~~~p~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~-------------h~~~v~~ 194 (271)
+.. | ...|.+++|+| ++.+|++++.| +.|++||+++++. ...+.. |...|.+
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~----~~~~l~~~~~d~~~g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSP----QGSLLAIAHDSNSFGCITLYETEFGER--IGSLSVPTHSSQASLGEFAHSSWVMS 296 (397)
T ss_dssp EECCC---CCCCCEEEEEECS----STTEEEEEEEETTEEEEEEEETTTCCE--EEEECBC--------CCBSBSSCEEE
T ss_pred EeccccccccCCccceEEECC----CCCEEEEEecCCCCceEEEEECCCCcc--cceeccCcccccccccccccCCcEEE
Confidence 888 8 99999999999 69999999999 9999999998876 666777 9999999
Q ss_pred EEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 195 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 195 v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
++|+|++.+|++++.|+.|++||+++. +.+..+.
T Consensus 297 ~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~ 330 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDGKLRFWDVKTK---ERITTLN 330 (397)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCC---ceeEEEe
Confidence 999999999999999999999999877 6677776
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=1.4e-22 Score=171.08 Aligned_cols=157 Identities=18% Similarity=0.280 Sum_probs=130.4
Q ss_pred EEEEccCCCeEEeccc---------eeeeccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEEeecCCCCceeeccc
Q psy13856 37 TLISCDTQAHIGIRST---------ISLLQGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLGTVQSSSPACLQPKY 106 (271)
Q Consensus 37 ~l~s~s~d~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~ 106 (271)
++++++.||.|++|++ +..+.+|... |.+++|+| ++++|++|+.|+.|++|++ .++.....
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~----V~~~~~~p~~~~~l~s~s~dg~v~vw~~---~~~~~~~~-- 119 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAP----VLDIAWCPHNDNVIASGSEDCTVMVWEI---PDGGLVLP-- 119 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSC----EEEEEECTTCTTEEEEEETTSEEEEEEC---CTTCCSSC--
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCC----EEEEEeCCCCCCEEEEEeCCCeEEEEEc---cCCCCccc--
Confidence 4556899999999997 3456789999 99999999 9999999999999999998 33322110
Q ss_pred eeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCC-cEEEEEeCCCeEEEEEcCCCceeeeeee
Q psy13856 107 FKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSK-CMIASCSQDRKVIIWTSNDYVTWTPFIM 185 (271)
Q Consensus 107 ~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 185 (271)
.. ..+..+.+|...|.+++|+| ++ .+|++|+.|+.|++||+++++. ...+
T Consensus 120 ---------------------~~--~~~~~~~~h~~~v~~~~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~ 170 (402)
T 2aq5_A 120 ---------------------LR--EPVITLEGHTKRVGIVAWHP----TAQNVLLSAGCDNVILVWDVGTGAA--VLTL 170 (402)
T ss_dssp ---------------------BC--SCSEEEECCSSCEEEEEECS----SBTTEEEEEETTSCEEEEETTTTEE--EEEE
T ss_pred ---------------------cC--CceEEecCCCCeEEEEEECc----CCCCEEEEEcCCCEEEEEECCCCCc--cEEE
Confidence 00 34566778999999999999 45 7999999999999999998876 5666
Q ss_pred --ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEe-cccc
Q psy13856 186 --NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTS 234 (271)
Q Consensus 186 --~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~~~~ 234 (271)
..|...|.+++|+|++.+|++++.|+.|++||++++ +.+..+ ..|.
T Consensus 171 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~ 219 (402)
T 2aq5_A 171 GPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG---TVVAEKDRPHE 219 (402)
T ss_dssp CTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT---EEEEEEECSSC
T ss_pred ecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC---ceeeeeccCCC
Confidence 789999999999999999999999999999999876 566666 4444
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=2.4e-22 Score=166.23 Aligned_cols=186 Identities=11% Similarity=0.050 Sum_probs=136.5
Q ss_pred cccCCCCC---CCEEEEccCCCeEEeccc------eeeeccccccccccceEEE------EcCCCCeEEEEeCCCcEEEE
Q psy13856 27 YTESPLRI---GHTLISCDTQAHIGIRST------ISLLQGSVYLRRESNKAGA------LSPKLNRSATSSFHEAAKHL 91 (271)
Q Consensus 27 ~~~~~~~~---g~~l~s~s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~------~s~~~~~l~s~s~d~~i~~~ 91 (271)
......|+ +.+|++|+.|+.|++||+ +..+.+|... |.+++ |+|++++|++++.|+.|++|
T Consensus 69 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 69 KCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEI----INAIDGIGGLGIGEGAPEIVTGSRDGTVKVW 144 (357)
T ss_dssp EEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSC----EEEEEEESGGGCC-CCCEEEEEETTSCEEEE
T ss_pred EEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccc----eEEEeeccccccCCCccEEEEEeCCCeEEEE
Confidence 33344455 799999999999999998 5667889998 99995 46899999999999999999
Q ss_pred EeecCCCCc-eeecc---------ceeeEE----Eeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccC
Q psy13856 92 GTVQSSSPA-CLQPK---------YFKLTV----YSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPS 152 (271)
Q Consensus 92 d~~~~~~~~-~~~~~---------~~~~~~----~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~ 152 (271)
|.. .+. ..... ...... ++.++..++ +.+++.+....+. .....|...|.+++|+|.
T Consensus 145 d~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 145 DPR---QKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-RWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp CTT---SCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-EEEEECSSCEEEEEESCS
T ss_pred eCC---CCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-eeecCCCCceEEEEcCCC
Confidence 984 333 22221 111222 335566666 7888822221133 344668899999999981
Q ss_pred CCCCCcEEEEEeCCCeEEEEEcCCCcee---eeeeeccCCCCeEEEEEecCCC-EEEEEECCCcEEEEEeCCC
Q psy13856 153 WGLSKCMIASCSQDRKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 153 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~v~iw~~~~~ 221 (271)
. .++.++++++.||.|++||+++.... ....+.+|...|++++|+|++. +|++++.||.|++||++..
T Consensus 221 ~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 221 D-ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp S-SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred C-CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 0 01789999999999999999875431 1113348999999999999998 8999999999999999864
No 72
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.7e-23 Score=185.94 Aligned_cols=192 Identities=31% Similarity=0.532 Sum_probs=147.8
Q ss_pred CCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
+..++++|++|+.||.|++||+ ...+.+|... |.+++|+|+ ++.+++|+.|+.|++||.........
T Consensus 63 ~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~----V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 63 HPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSAS----VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp CTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCC----eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 3334999999999999999998 4566788888 999999999 99999999999999999843222222
Q ss_pred eeccc----eeeEEEee-------------ccceee-----eEEEE--ee--CCceEEeEEecCCCcceEEEEEccCCCC
Q psy13856 102 LQPKY----FKLTVYST-------------KLTRIL-----ILVRI--CG--GDKWIEETKLENHSDWVRDVAWAPSWGL 155 (271)
Q Consensus 102 ~~~~~----~~~~~~~~-------------~~~~l~-----~~v~i--~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 155 (271)
..... .....+.+ ++..++ +.|++ .. .........+.+|...|.+++|+|
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp---- 214 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP---- 214 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC----
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc----
Confidence 22111 23334444 355666 77887 22 223366778899999999999999
Q ss_pred C---CcEEEEEeCCCeEEEEEcCCCcee---eeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEE
Q psy13856 156 S---KCMIASCSQDRKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE 229 (271)
Q Consensus 156 ~---~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 229 (271)
+ +.++++|+.||.|++||++++... .......|...|++++|+|+|.+|++++.||.|++|+++.++.|.....
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~~~ 294 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGE 294 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCCCC
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccccc
Confidence 5 899999999999999999886421 1233456888999999999999999999999999999987766655544
Q ss_pred e
Q psy13856 230 M 230 (271)
Q Consensus 230 ~ 230 (271)
.
T Consensus 295 ~ 295 (753)
T 3jro_A 295 V 295 (753)
T ss_dssp B
T ss_pred c
Confidence 3
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=4.1e-22 Score=168.34 Aligned_cols=176 Identities=16% Similarity=0.159 Sum_probs=141.1
Q ss_pred CCCEEEEccCCCeEEeccc------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc--
Q psy13856 34 IGHTLISCDTQAHIGIRST------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-- 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-- 105 (271)
++..+++|+.|+.|++||+ ...+.+|... |.+++|+|++++|++|+.|+.|++||. .++......
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~~~d~~v~iwd~---~~~~~~~~~~~ 257 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE----VCGLAWRSDGLQLASGGNDNVVQIWDA---RSSIPKFTKTN 257 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC----EEEEEECTTSSEEEEEETTSCEEEEET---TCSSEEEEECC
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCC----eeEEEEcCCCCEEEEEeCCCeEEEccC---CCCCccEEecC
Confidence 6789999999999999998 6677889999 999999999999999999999999998 555554433
Q ss_pred ---ceeeEEEeeccce-ee-------eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEE--EeCCCeEEEE
Q psy13856 106 ---YFKLTVYSTKLTR-IL-------ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS--CSQDRKVIIW 172 (271)
Q Consensus 106 ---~~~~~~~~~~~~~-l~-------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s--~~~dg~i~iw 172 (271)
......++..+.. ++ +.+++.+.........+. +...|.+++|+| ++.++++ |+.||.|++|
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~----~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP----HSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS----SSSEEEEEECTTTCEEEEE
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC----CCCeEEEEeecCCCcEEEE
Confidence 2244455554433 33 567773322225666665 668899999999 6888888 4489999999
Q ss_pred EcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 173 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 173 d~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|+.++.......+.+|...|.+++|+|++.+|++++.||.|++|++.++
T Consensus 333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 9998765435557799999999999999999999999999999999876
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=2.8e-22 Score=171.03 Aligned_cols=196 Identities=11% Similarity=0.057 Sum_probs=144.4
Q ss_pred ceecccCCCCCCCEEEEccCCCeEEeccc----------------eeeecccc------------ccccccceEEEEcCC
Q psy13856 24 IETYTESPLRIGHTLISCDTQAHIGIRST----------------ISLLQGSV------------YLRRESNKAGALSPK 75 (271)
Q Consensus 24 ~~~~~~~~~~~g~~l~s~s~d~~i~lwd~----------------~~~~~~h~------------~~~~~~i~~~~~s~~ 75 (271)
-.+......|+|++||+|+.||.|++||+ ...+.+|. .. |.+++|+|+
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~----V~~l~~~~~ 104 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEK----INKIRWLPQ 104 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCC----CCEEEECCC
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCc----eEEEEEcCC
Confidence 34445555679999999999999999996 33567887 77 999999999
Q ss_pred C--CeEEEEeCCCcEEEEEeecCCCCcee---------------------------------------ec--c----cee
Q psy13856 76 L--NRSATSSFHEAAKHLGTVQSSSPACL---------------------------------------QP--K----YFK 108 (271)
Q Consensus 76 ~--~~l~s~s~d~~i~~~d~~~~~~~~~~---------------------------------------~~--~----~~~ 108 (271)
+ ..|++++.|++|++|+... +... .. . ...
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISE---RDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEE---EEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred CCcceEEEeCCCCeEEEEeccc---ccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 8 7999999999999999842 1110 00 0 123
Q ss_pred eEEEeeccceee----eEEEEeeCC-ceEEeE-------EecCCCcceEEEEEccCCCCCC-cEEEEEeCCCeEEEEEcC
Q psy13856 109 LTVYSTKLTRIL----ILVRICGGD-KWIEET-------KLENHSDWVRDVAWAPSWGLSK-CMIASCSQDRKVIIWTSN 175 (271)
Q Consensus 109 ~~~~~~~~~~l~----~~v~i~~~~-~~~~~~-------~~~~h~~~v~~v~~~p~~~~~~-~~l~s~~~dg~i~iwd~~ 175 (271)
...++.+++.++ +.|++++.. .-.... .+.+|...|.+++|+| ++ .+|++|+.||.|++||++
T Consensus 182 ~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 182 SISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP----NSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp EEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS----SCTTEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC----CCCcEEEEEeCCCeEEEEECc
Confidence 445556677776 778883222 113333 3568999999999999 56 999999999999999999
Q ss_pred CCceee--eeeeccCCC------------CeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 176 DYVTWT--PFIMNTFDD------------VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 176 ~~~~~~--~~~~~~h~~------------~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
++.... ...+..|.. .|.+++|+|+|.+|++++. +.|++||++..+ +++..+..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~--~~~~~~~~~ 326 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN--RPVETYQVH 326 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS--SCSCCEESC
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc--cccceeecc
Confidence 876310 245666765 8999999999999999998 999999998622 334444444
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=3.5e-22 Score=168.06 Aligned_cols=185 Identities=17% Similarity=0.173 Sum_probs=143.1
Q ss_pred cceecccCCCC-CCCEEEEccCCCeEEeccc-----eeee-------------ccccccccccceEEEEcC-CCCeEEEE
Q psy13856 23 EIETYTESPLR-IGHTLISCDTQAHIGIRST-----ISLL-------------QGSVYLRRESNKAGALSP-KLNRSATS 82 (271)
Q Consensus 23 ~~~~~~~~~~~-~g~~l~s~s~d~~i~lwd~-----~~~~-------------~~h~~~~~~~i~~~~~s~-~~~~l~s~ 82 (271)
.-.+......| ++++|++|+.||.|++||+ ...+ .+|... |.+++|+| ++++|+++
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS----VETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC----EEEEEECTTCTTCEEEE
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc----EEEEEEccCCCcEEEEE
Confidence 34445555667 8999999999999999998 1222 248888 99999999 77899999
Q ss_pred eCCCcEEEEEeecCCCCceeeccce----eeEEEeec---cceee-----eEEEE--eeCCceEEeEEecCCCcceEEEE
Q psy13856 83 SFHEAAKHLGTVQSSSPACLQPKYF----KLTVYSTK---LTRIL-----ILVRI--CGGDKWIEETKLENHSDWVRDVA 148 (271)
Q Consensus 83 s~d~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~---~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~ 148 (271)
+.|+.|++||. .++........ ....+... +..++ +.+++ ...+ .....+.+|...|.+++
T Consensus 119 ~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 119 SFDKTLKVWDT---NTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG--SCSHILQGHRQEILAVS 193 (408)
T ss_dssp ETTSEEEEEET---TTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS--CCCEEECCCCSCEEEEE
T ss_pred eCCCeEEEeeC---CCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc--ceeeeecCCCCcEEEEE
Confidence 99999999998 66666554422 22223332 22444 67777 2333 66778889999999999
Q ss_pred EccCCCCCCc-EEEEEeCCCeEEEEEcCCCceeeeeee---------------ccCCCCeEEEEEecCCCEEEEEECCCc
Q psy13856 149 WAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWTPFIM---------------NTFDDVVWNVSWSLTGDILTVSCGDNS 212 (271)
Q Consensus 149 ~~p~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------~~h~~~v~~v~~~~~g~~l~s~s~D~~ 212 (271)
|+|. +. ++++|+.||.|++||++..... ...+ ..|...|.+++|+|++.+|++++.|+.
T Consensus 194 ~~~~----~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 194 WSPR----YDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp ECSS----CTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCC----CCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 9994 56 6999999999999999876421 2222 578899999999999999999999999
Q ss_pred EEEEEeCCC
Q psy13856 213 VSLWKENTD 221 (271)
Q Consensus 213 v~iw~~~~~ 221 (271)
|++||+.++
T Consensus 269 i~vwd~~~~ 277 (408)
T 4a11_B 269 MRLWNSSNG 277 (408)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 999999865
No 76
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.1e-23 Score=181.60 Aligned_cols=178 Identities=10% Similarity=-0.020 Sum_probs=122.7
Q ss_pred CCCCEEEEccCCCeEEeccc----e-----eeeccccccccccceEEEEcCC------CCeEEEEeCCCcEEEEEeecCC
Q psy13856 33 RIGHTLISCDTQAHIGIRST----I-----SLLQGSVYLRRESNKAGALSPK------LNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~-----~~~~~h~~~~~~~i~~~~~s~~------~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
|+++.+++++.|++|+||++ . ..+..|.+. |.+++|+|+ +.+|++++.|++|++||+..+.
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~----V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE----VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCS----EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCc----EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 56677888999999999998 1 235667788 999999996 5799999999999999984221
Q ss_pred CCc--e------eecc-----ceeeEEEeeccceee-----eEEEEeeCC-ceEEeEEecCCCcceEEE--EEccCCCCC
Q psy13856 98 SPA--C------LQPK-----YFKLTVYSTKLTRIL-----ILVRICGGD-KWIEETKLENHSDWVRDV--AWAPSWGLS 156 (271)
Q Consensus 98 ~~~--~------~~~~-----~~~~~~~~~~~~~l~-----~~v~i~~~~-~~~~~~~~~~h~~~v~~v--~~~p~~~~~ 156 (271)
... . .... ......+.. ...++ +.|++++.. ...+...+.+|...|.+| .|+| +
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~----~ 321 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD----F 321 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT----T
T ss_pred cccccceeecCceEEEEcCCCCEEEEEecC-CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC----C
Confidence 110 0 0011 112233333 34555 889982221 113445678999999999 5667 5
Q ss_pred C-cEEEEEeCCCeEEEEEcCCCceeeeeeeccCCC--CeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 157 K-CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 157 ~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~--~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+ .+|+||+.|++|++||++++.+ ...+.+|.. .|++++|+|++..+++++.|++|++||++..
T Consensus 322 g~~~laS~S~D~tvklWD~~~~~~--~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 322 EDTVVSTVAVDGYFYIFNPKDIAT--TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp SCCEEEEEETTSEEEEECGGGHHH--HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred CCeEEEEeccCCeEEEEECCCCCc--ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 6 8999999999999999998765 444555543 5889999999999999999999999999876
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=2e-21 Score=166.85 Aligned_cols=179 Identities=14% Similarity=0.114 Sum_probs=141.9
Q ss_pred CCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEc--CCCCeEEEEeCCCcEEEEEeecCCCCce-
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALS--PKLNRSATSSFHEAAKHLGTVQSSSPAC- 101 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s--~~~~~l~s~s~d~~i~~~d~~~~~~~~~- 101 (271)
...+++ .|++|+.||+|++||+ +..+.+|... |.+++|+ ++++++++|+.|+.|++||.........
T Consensus 169 ~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~----v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 169 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNST----VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp EECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred EEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCc----cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 334555 9999999999999998 6778899999 9999998 5778999999999999999842221110
Q ss_pred -------------------eecc-ce--eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCC
Q psy13856 102 -------------------LQPK-YF--KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWG 154 (271)
Q Consensus 102 -------------------~~~~-~~--~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 154 (271)
.... .+ .....+.++..++ +.|++.+....+.+..+.+|...|.+++|+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~--- 320 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH--- 320 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC---
Confidence 1111 11 2222334456665 7788833222378888999999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 155 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 155 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
++.++++|+.||.|++||+++++. ...+.+|...|.+++|+ +.+|++++.||.|++||+++.
T Consensus 321 -~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 321 -ERKRCISASMDTTIRIWDLENGEL--MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp -TTTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred -CCCEEEEEeCCCcEEEEECCCCcE--EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCC
Confidence 699999999999999999999876 77888999999999997 579999999999999999875
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=1.6e-21 Score=164.61 Aligned_cols=195 Identities=11% Similarity=0.072 Sum_probs=149.2
Q ss_pred ecccCCCC-CCCEEEEccCCCeEEeccc------------eeeeccccccccccceEEEEcCCC-CeEEEEeCCCcEEEE
Q psy13856 26 TYTESPLR-IGHTLISCDTQAHIGIRST------------ISLLQGSVYLRRESNKAGALSPKL-NRSATSSFHEAAKHL 91 (271)
Q Consensus 26 ~~~~~~~~-~g~~l~s~s~d~~i~lwd~------------~~~~~~h~~~~~~~i~~~~~s~~~-~~l~s~s~d~~i~~~ 91 (271)
+......| ++.+|++|+.||.|++||+ +..+.+|... |.+++|+|++ ++|++++.|+.|++|
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~----v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR----VGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC----EEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe----EEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 34444556 8899999999999999998 3456789998 9999999998 699999999999999
Q ss_pred EeecCCCCceeecc---ce----eeEEEeeccceee-----eEEEEeeCCceEEeEEe-cCCCcc-eEEEEEccCCCCCC
Q psy13856 92 GTVQSSSPACLQPK---YF----KLTVYSTKLTRIL-----ILVRICGGDKWIEETKL-ENHSDW-VRDVAWAPSWGLSK 157 (271)
Q Consensus 92 d~~~~~~~~~~~~~---~~----~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~~ 157 (271)
|+ .++++.... .+ ....++.++..++ +.+++.+......+..+ .+|.+. +.++.|+| ++
T Consensus 160 d~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 232 (402)
T 2aq5_A 160 DV---GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS----EG 232 (402)
T ss_dssp ET---TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS----TT
T ss_pred EC---CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC----CC
Confidence 98 666655443 12 3455666677777 78888332222677777 788776 89999999 68
Q ss_pred cEEEEE---eCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEE-ECCCcEEEEEeCCCCc-eeEEEEec
Q psy13856 158 CMIASC---SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENTDGA-WQCITEMG 231 (271)
Q Consensus 158 ~~l~s~---~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~~~~~~~-~~~~~~~~ 231 (271)
.++++| +.|+.|++||+++...........|...+.+++|+|++.+|+++ +.|+.|++|++..+.. ...+....
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 999999 78999999999886542122333577889999999999999755 4799999999987753 34444443
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=5.2e-22 Score=181.57 Aligned_cols=195 Identities=15% Similarity=0.212 Sum_probs=158.3
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+......|+|.+|++|+.||.|++||+ +..+.+|... |.+++|+|++++|++++.|+.|++|+. .+++
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~dg~i~vw~~---~~~~ 88 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSDDFRIRVFNY---NTGE 88 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEETTSEEEEEET---TTCC
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCCCEEEEEeCCCeEEEEEC---CCCc
Confidence 444455679999999999999999998 6778899999 999999999999999999999999998 6666
Q ss_pred eeecc-----ceeeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeE
Q psy13856 101 CLQPK-----YFKLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 169 (271)
Q Consensus 101 ~~~~~-----~~~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i 169 (271)
..... ......++.++..++ +.+++ ...........+.+|...|.+++|+|. ++.+|++++.||.|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK---DPSTFASGCLDRTV 165 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT---EEEEEEEEETTSEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC---CCCEEEEEeCCCeE
Confidence 65544 224556667777777 78888 322223677888899999999999995 58899999999999
Q ss_pred EEEEcCCCceeeeeeec-cCCCCeEEEEEec--CCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 170 IIWTSNDYVTWTPFIMN-TFDDVVWNVSWSL--TGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 170 ~iwd~~~~~~~~~~~~~-~h~~~v~~v~~~~--~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
++||+..+.. ...+. .+...+.+++|+| ++.+|++++.|+.|++||+.++ +.+..+.+|..
T Consensus 166 ~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~ 229 (814)
T 3mkq_A 166 KVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK---SCVATLEGHMS 229 (814)
T ss_dssp EEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT---EEEEEEECCSS
T ss_pred EEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC---cEEEEEcCCCC
Confidence 9999987765 34444 4458999999999 8999999999999999999876 55666655543
No 80
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.90 E-value=7.4e-22 Score=162.53 Aligned_cols=191 Identities=13% Similarity=0.017 Sum_probs=144.2
Q ss_pred cccCCCCCCC-EEEEccCCCeEEeccc-----eeeecc--ccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 27 YTESPLRIGH-TLISCDTQAHIGIRST-----ISLLQG--SVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 27 ~~~~~~~~g~-~l~s~s~d~~i~lwd~-----~~~~~~--h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
......+++. +|++|+.||.|++||+ ...+.+ |... |.+++|+| ++.+++++.|+.|++||......
T Consensus 60 ~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~----v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLG----ICRICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp EEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSC----EEEEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred EEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCc----eEEEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 3334456899 9999999999999997 556777 9888 99999999 99999999999999999842000
Q ss_pred ------Cceeeccce----eeEEEeeccceee-----eEEEE--eeC-CceEEeEEecCCCcceEEEEEcc-CCCCCCcE
Q psy13856 99 ------PACLQPKYF----KLTVYSTKLTRIL-----ILVRI--CGG-DKWIEETKLENHSDWVRDVAWAP-SWGLSKCM 159 (271)
Q Consensus 99 ------~~~~~~~~~----~~~~~~~~~~~l~-----~~v~i--~~~-~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~~~ 159 (271)
++++....+ ....+..+. ++ +.+++ ... ...........|...+.+++|+| . +.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~----~~~ 208 (342)
T 1yfq_A 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE----QEG 208 (342)
T ss_dssp BCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG----GCE
T ss_pred ccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC----CCE
Confidence 333322222 222232223 43 67887 222 21123344556888999999999 5 789
Q ss_pred EEEEeCCCeEEEEEcCCC------ceeeeeeeccCCC---------CeEEEEEecCCCEEEEEECCCcEEEEEeCCCCce
Q psy13856 160 IASCSQDRKVIIWTSNDY------VTWTPFIMNTFDD---------VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 224 (271)
Q Consensus 160 l~s~~~dg~i~iwd~~~~------~~~~~~~~~~h~~---------~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~ 224 (271)
+++++.||.+++|+++.. .. ...+..|.. .|.+++|+|++.+|++++.||.|++||+.++
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--- 283 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSK--RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR--- 283 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTT--CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT---
T ss_pred EEEEecCCcEEEEEEcCCCccccccc--ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH---
Confidence 999999999999999876 33 556666654 9999999999999999999999999999877
Q ss_pred eEEEEeccc
Q psy13856 225 QCITEMGKT 233 (271)
Q Consensus 225 ~~~~~~~~~ 233 (271)
+.+..+..+
T Consensus 284 ~~~~~~~~~ 292 (342)
T 1yfq_A 284 KKIKNFAKF 292 (342)
T ss_dssp EEEEECCCC
T ss_pred hHhhhhhcc
Confidence 667777776
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.4e-21 Score=164.96 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=138.2
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeecc-ccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-c
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQG-SVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-Y 106 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~-h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~ 106 (271)
++..+++++.|+.|++||. ...+.. |... |.+++|+|++++|++|+.|+.|++||. .+++.+... .
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~----v~~v~~s~~~~~l~~~~~dg~i~iwd~---~~~~~~~~~~~ 174 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGSVSALAETDESTY----VASVKWSHDGSFLSVGLGNGLVDIYDV---ESQTKLRTMAG 174 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCC----EEEEEECTTSSEEEEEETTSCEEEEET---TTCCEEEEECC
T ss_pred cCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCC----EEEEEECCCCCEEEEECCCCeEEEEEC---cCCeEEEEecC
Confidence 4566888999999999998 333333 7777 999999999999999999999999998 666655544 2
Q ss_pred e--eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc
Q psy13856 107 F--KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 178 (271)
Q Consensus 107 ~--~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 178 (271)
+ .......+++.++ +.+++ ...........+.+|...|.+++|+| ++.+|++|+.|+.|++||+++..
T Consensus 175 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 175 HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS----DGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT----TSSEEEEEETTSCEEEEETTCSS
T ss_pred CCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC----CCCEEEEEeCCCeEEEccCCCCC
Confidence 2 2222222456665 78888 22211256778889999999999999 69999999999999999999877
Q ss_pred eeeeeeeccCCCCeEEEEEecCC-CEEEEEE--CCCcEEEEEeCCC
Q psy13856 179 TWTPFIMNTFDDVVWNVSWSLTG-DILTVSC--GDNSVSLWKENTD 221 (271)
Q Consensus 179 ~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s--~D~~v~iw~~~~~ 221 (271)
. ...+..|...|.+++|+|++ .++++++ .|+.|++||+.++
T Consensus 251 ~--~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 251 P--KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp E--EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred c--cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 6 66778899999999999976 5566655 6999999999876
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.90 E-value=2.5e-22 Score=167.76 Aligned_cols=185 Identities=10% Similarity=-0.010 Sum_probs=137.4
Q ss_pred EccCCCeEEeccc------eee--------eccccccccccceEEEEcCCCCeEEEE--eCCCcEEEEEeecCCCCceee
Q psy13856 40 SCDTQAHIGIRST------ISL--------LQGSVYLRRESNKAGALSPKLNRSATS--SFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 40 s~s~d~~i~lwd~------~~~--------~~~h~~~~~~~i~~~~~s~~~~~l~s~--s~d~~i~~~d~~~~~~~~~~~ 103 (271)
+++.|+++|+|++ +.. ...+... +.+++|||||++++++ +.|++|++||. .++.+..
T Consensus 99 s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~fSpDg~~la~as~~~d~~i~iwd~---~~~~~~~ 171 (365)
T 4h5i_A 99 QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDY----TKLVYISREGTVAAIASSKVPAIMRIIDP---SDLTEKF 171 (365)
T ss_dssp HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCC----EEEEEECTTSSCEEEEESCSSCEEEEEET---TTTEEEE
T ss_pred EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccC----EEEEEEcCCCCEEEEEECCCCCEEEEeEC---CCCcEEE
Confidence 4466888999987 111 1123334 7899999999987654 47899999998 6666665
Q ss_pred ccc----eeeEEEeeccceee----eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCC----eE
Q psy13856 104 PKY----FKLTVYSTKLTRIL----ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR----KV 169 (271)
Q Consensus 104 ~~~----~~~~~~~~~~~~l~----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg----~i 169 (271)
... .....+++++++++ +.+.+ ...+.........+|...|.+++|+| ++.++++++.|+ .+
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp----dg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIA----DDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEE----TTEEEEEEEESSSCCEEE
T ss_pred EeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcC----CCCEEEEEecCCcceeEE
Confidence 542 24566778888887 33444 33443233345567889999999999 799999999887 68
Q ss_pred EEEEcCCCcee--eeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEe-cccchhhh
Q psy13856 170 IIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM-GKTSEQRA 238 (271)
Q Consensus 170 ~iwd~~~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~~~~~~~~ 238 (271)
++|+....... ....+.+|...|++++|+|+|++||+|+.|++|+|||++++ +++.++ ++|.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~---~~~~~~~~gH~~~V~ 316 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL---SMSKIFKQAHSFAIT 316 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT---EEEEEETTSSSSCEE
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC---cEEEEecCcccCCEE
Confidence 89998766432 13456789999999999999999999999999999999877 777775 66765533
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.6e-22 Score=179.44 Aligned_cols=173 Identities=21% Similarity=0.232 Sum_probs=144.8
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCC--CCeEEEEeCCCcEEEEEe
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPK--LNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~--~~~l~s~s~d~~i~~~d~ 93 (271)
...+......|+|++|++|+.||.|++||+ ...+.+|.+. |++++|+|+ +++|++|+.||.|++||.
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~----V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSC----EEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCc----eEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 344555556679999999999999999997 5677899999 999999988 899999999999999998
Q ss_pred ecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCC--CcEEEEEeCCCeEEE
Q psy13856 94 VQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLS--KCMIASCSQDRKVII 171 (271)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~--~~~l~s~~~dg~i~i 171 (271)
. .+.+.....+.+|...|.+++|+| + +.++++|+.||.|++
T Consensus 85 ~---------------------------------~~~~~~~~~~~~h~~~V~~v~~sp----~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 85 E---------------------------------NGRWSQIAVHAVHSASVNSVQWAP----HEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp E---------------------------------TTEEEEEEEECCCSSCEEEEEECC----GGGCSEEEEEETTSEEEE
T ss_pred C---------------------------------CCcccccccccCCCCCeEEEEECC----CCCCCEEEEEeCCCcEEE
Confidence 2 333346677788999999999999 6 899999999999999
Q ss_pred EEcCCCceeeeeeeccCCCCeEEEEEec-------------CCCEEEEEECCCcEEEEEeCCCC-ceeEEEEecccchh
Q psy13856 172 WTSNDYVTWTPFIMNTFDDVVWNVSWSL-------------TGDILTVSCGDNSVSLWKENTDG-AWQCITEMGKTSEQ 236 (271)
Q Consensus 172 wd~~~~~~~~~~~~~~h~~~v~~v~~~~-------------~g~~l~s~s~D~~v~iw~~~~~~-~~~~~~~~~~~~~~ 236 (271)
||++.........+.+|...|.+++|+| ++.++++|+.||.|++||++.+. .+.....+.+|...
T Consensus 128 wdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 9999875433566788999999999999 58999999999999999998653 34556666665543
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=4.4e-22 Score=167.26 Aligned_cols=147 Identities=17% Similarity=0.195 Sum_probs=125.6
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc-----eeeecc---c---cccccccceEEEEcCCCCeEEEEeCC---CcEEEEEee
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST-----ISLLQG---S---VYLRRESNKAGALSPKLNRSATSSFH---EAAKHLGTV 94 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~---h---~~~~~~~i~~~~~s~~~~~l~s~s~d---~~i~~~d~~ 94 (271)
....|++ ++++++.|+.|++||+ +..+.. | ... |.+++|+|++++|++++.| +.|++||.
T Consensus 192 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~----i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~- 265 (397)
T 1sq9_A 192 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS----IRSVKFSPQGSLLAIAHDSNSFGCITLYET- 265 (397)
T ss_dssp EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC----EEEEEECSSTTEEEEEEEETTEEEEEEEET-
T ss_pred EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc----cceEEECCCCCEEEEEecCCCCceEEEEEC-
Confidence 3445788 9999999999999998 566677 8 888 9999999999999999999 99999998
Q ss_pred cCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC-------------CCcceEEEEEccCCCCCCcEEE
Q psy13856 95 QSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN-------------HSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
.+++. +..+.+ |...|.+++|+| ++.+|+
T Consensus 266 --~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~ 307 (397)
T 1sq9_A 266 --EFGER--------------------------------IGSLSVPTHSSQASLGEFAHSSWVMSLSFND----SGETLC 307 (397)
T ss_dssp --TTCCE--------------------------------EEEECBC--------CCBSBSSCEEEEEECS----SSSEEE
T ss_pred --CCCcc--------------------------------cceeccCcccccccccccccCCcEEEEEECC----CCCEEE
Confidence 33332 333333 899999999999 699999
Q ss_pred EEeCCCeEEEEEcCCCceeeeeeec------cC---------------CCCeEEEEEecCC----------CEEEEEECC
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFIMN------TF---------------DDVVWNVSWSLTG----------DILTVSCGD 210 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~~~------~h---------------~~~v~~v~~~~~g----------~~l~s~s~D 210 (271)
+++.|+.|++||+++.+. ...+. +| ...|++++|+|++ .+|++++.|
T Consensus 308 ~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKER--ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp EEETTSEEEEEETTTTEE--EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred EEeCCCeEEEEEcCCCce--eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC
Confidence 999999999999998876 56666 67 8999999999998 799999999
Q ss_pred CcEEEEEeCCC
Q psy13856 211 NSVSLWKENTD 221 (271)
Q Consensus 211 ~~v~iw~~~~~ 221 (271)
+.|++|+++++
T Consensus 386 g~i~iw~~~~g 396 (397)
T 1sq9_A 386 RSIRWFREAGG 396 (397)
T ss_dssp TEEEEEEEEC-
T ss_pred CcEEEEEcCCC
Confidence 99999999864
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.90 E-value=2.4e-22 Score=167.95 Aligned_cols=185 Identities=11% Similarity=0.022 Sum_probs=137.4
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc--------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST--------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~--------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
+......|++++|++|+.|+.|++||+ ...+.+|... |.+++|+|++++|++++.|+.|++||...+.
T Consensus 58 v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRA----ATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp EEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSC----EEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCc----eEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 344455679999999999999999998 2345678888 9999999999999999999999999984322
Q ss_pred CCceeecc------ceeeEEEeeccceee-----eEEEE-eeC-----------------CceEEeEEecCCCcceEEEE
Q psy13856 98 SPACLQPK------YFKLTVYSTKLTRIL-----ILVRI-CGG-----------------DKWIEETKLENHSDWVRDVA 148 (271)
Q Consensus 98 ~~~~~~~~------~~~~~~~~~~~~~l~-----~~v~i-~~~-----------------~~~~~~~~~~~h~~~v~~v~ 148 (271)
...+.... ......++.+++.++ +.+++ ... ........+ +|...|.+++
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 212 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG 212 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE
Confidence 11122222 224455666677777 67777 211 112556666 8999999999
Q ss_pred EccCCCCCCcEEEEEeCCCeEEEEEcCCCcee--eeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 149 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 149 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
|+| ++.+|++++.|+.|++||++++... ....+.+|...|.+++|+|++.+|++++.|+.+ +|+...
T Consensus 213 ~sp----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 213 FSP----SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp ECT----TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred ECC----CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 999 6999999999999999999987641 135677899999999999999999998766655 777653
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.5e-21 Score=156.36 Aligned_cols=185 Identities=12% Similarity=0.063 Sum_probs=145.8
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc--------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST--------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~--------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
......|++.+|++|+.|+.|++|++ +..+.+|... |.+++| +++.+++++.|+.+++||.
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~--~~~~l~~~~~d~~i~~~d~----- 131 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN----VCSLSF--QDGVVISGSWDKTAKVWKE----- 131 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC----EEEEEE--ETTEEEEEETTSEEEEEET-----
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC----EEEEEe--cCCEEEEEeCCCCEEEEcC-----
Confidence 33444579999999999999999997 5667889988 999999 5789999999999999993
Q ss_pred Cceeecc-----ceeeEEEee-ccceee-----eEEEEeeCCceEEeEEecC-CCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 99 PACLQPK-----YFKLTVYST-KLTRIL-----ILVRICGGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 99 ~~~~~~~-----~~~~~~~~~-~~~~l~-----~~v~i~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
+...... ......+.. ++..++ +.+++.+.. .....+.. |...+.+++|+| ++. +++++.|
T Consensus 132 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~----~~~-~~~~~~d 204 (313)
T 3odt_A 132 GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVD----DGH-FISCSND 204 (313)
T ss_dssp TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEE----TTE-EEEEETT
T ss_pred CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcC----CCe-EEEccCC
Confidence 2222222 112233333 566666 778885555 56677777 899999999999 466 9999999
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
+.|++||+++++. ...+.+|...|.+++|+|++ .|++++.|+.|++||++++ +....+..+..
T Consensus 205 g~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~ 267 (313)
T 3odt_A 205 GLIKLVDMHTGDV--LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENG---SLKQVITLPAI 267 (313)
T ss_dssp SEEEEEETTTCCE--EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTC---CEEEEEECSSS
T ss_pred CeEEEEECCchhh--hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCC---ceeEEEeccCc
Confidence 9999999998876 67788999999999999999 5889999999999999877 55666665543
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=2.5e-22 Score=166.52 Aligned_cols=186 Identities=13% Similarity=0.121 Sum_probs=144.4
Q ss_pred CCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEEeecCCCCceeecc---
Q psy13856 35 GHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLGTVQSSSPACLQPK--- 105 (271)
Q Consensus 35 g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~--- 105 (271)
+.+|++|+.||.|++||+ +..+.+|... |.+++|+| ++++|++++.|+.|++||. .+++.....
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~ 157 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNA----INELKFHPRDPNLLLSVSKDHALRLWNI---QTDTLVAIFGGV 157 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSC----EEEEEECSSCTTEEEEEETTSCEEEEET---TTTEEEEEECST
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCc----EEEEEECCCCCCEEEEEeCCCeEEEEEe---ecCeEEEEeccc
Confidence 779999999999999998 6778889999 99999999 9999999999999999998 555555443
Q ss_pred -ce----eeEEEeeccceee-----eEEEEeeCCceEE----------------------------eEEecCCCcceEEE
Q psy13856 106 -YF----KLTVYSTKLTRIL-----ILVRICGGDKWIE----------------------------ETKLENHSDWVRDV 147 (271)
Q Consensus 106 -~~----~~~~~~~~~~~l~-----~~v~i~~~~~~~~----------------------------~~~~~~h~~~v~~v 147 (271)
.+ ....++.++..++ +.+++.+....+. .....+|...|.++
T Consensus 158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 237 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 237 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred ccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEE
Confidence 12 3445556677766 6777722111011 22334499999999
Q ss_pred EEccCCCCCCcEEEEEeCCCeEEEEEcCCCce------------eeeeeeccCCCCeEEEEEecC--CCEEEEEECCCcE
Q psy13856 148 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNVSWSLT--GDILTVSCGDNSV 213 (271)
Q Consensus 148 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~~h~~~v~~v~~~~~--g~~l~s~s~D~~v 213 (271)
+|++ .++++++.|+.|++||+++... .....+..|...|++++|+|+ +.+|++++.||.|
T Consensus 238 ~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i 311 (366)
T 3k26_A 238 RWLG------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 311 (366)
T ss_dssp EEET------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred EEcC------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence 9984 5999999999999999987543 225567789999999999999 9999999999999
Q ss_pred EEEEeCCCCcee-EEEEeccc
Q psy13856 214 SLWKENTDGAWQ-CITEMGKT 233 (271)
Q Consensus 214 ~iw~~~~~~~~~-~~~~~~~~ 233 (271)
++||++.+.... ....+..+
T Consensus 312 ~vwd~~~~~~~~~~~~~~~~~ 332 (366)
T 3k26_A 312 YVWDLEVEDPHKAKCTTLTHH 332 (366)
T ss_dssp EEEECCSSSGGGCEEEEECCT
T ss_pred EEEECCCCCCccccceEEccc
Confidence 999998764332 44556555
No 88
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=7.8e-23 Score=172.44 Aligned_cols=147 Identities=10% Similarity=0.005 Sum_probs=118.5
Q ss_pred CCCCEEEEccCCCeEEeccc----------eeeeccccccccccceEEEEcC--------CCCeEEEEeCCCcEEEEEee
Q psy13856 33 RIGHTLISCDTQAHIGIRST----------ISLLQGSVYLRRESNKAGALSP--------KLNRSATSSFHEAAKHLGTV 94 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----------~~~~~~h~~~~~~~i~~~~~s~--------~~~~l~s~s~d~~i~~~d~~ 94 (271)
+++.+|++|+.|++|+|||. +..+.+|.+. |++++|+| |+++|++|+.|++|++||+.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~----v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF----VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC----EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc----eEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 46678999999999999997 3446899999 99999998 78999999999999999982
Q ss_pred cCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEc
Q psy13856 95 QSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS 174 (271)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~ 174 (271)
.+ .....+.+|...|.+++|+|. +..+|++|+.|+.|++||+
T Consensus 175 ---------------------------------~~--~~~~~~~~~~~~v~~v~~~p~---~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 175 ---------------------------------DE--GPILAGYPLSSPGISVQFRPS---NPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp ---------------------------------TT--EEEEEEEECSSCEEEEEEETT---EEEEEEEEETTSEEEEEET
T ss_pred ---------------------------------CC--ceeeeecCCCCCcEEEEECCC---CCceEEecCCCCEEEEEEC
Confidence 22 345556678899999999995 4568999999999999999
Q ss_pred CCCceee-----------------------eeeeccCCCCeEEEEEe-cCCCEEEEEECCCcEEEEEeCCC
Q psy13856 175 NDYVTWT-----------------------PFIMNTFDDVVWNVSWS-LTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 175 ~~~~~~~-----------------------~~~~~~h~~~v~~v~~~-~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+++.... .....+|...+.++.|+ |++..|++++.|+++++||+...
T Consensus 217 ~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 217 TLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp TCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 8754210 01124677889999997 79999999999999999999866
No 89
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.89 E-value=1.1e-21 Score=167.19 Aligned_cols=187 Identities=15% Similarity=0.178 Sum_probs=142.9
Q ss_pred cccCCCCCCC-EEEEccCCCeEEeccc------------eeeeccccccccccceEEEEcC-CCCeEEEEeCCCcEEEEE
Q psy13856 27 YTESPLRIGH-TLISCDTQAHIGIRST------------ISLLQGSVYLRRESNKAGALSP-KLNRSATSSFHEAAKHLG 92 (271)
Q Consensus 27 ~~~~~~~~g~-~l~s~s~d~~i~lwd~------------~~~~~~h~~~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~d 92 (271)
+.....+++. +|++|+.||.|++|++ ...+.+|... |.+++|+| ++..|++++.|+.|++||
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~----v~~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAV----VEDVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSC----EEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCC----EeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 4445557777 9999999999999998 2345688888 99999999 678999999999999999
Q ss_pred eecCCCCceeecc-----ceeeEEEeeccc-eee-----eEEEEeeCC-ceEEeEEecCCCcceEEEEEccCCCCCCcEE
Q psy13856 93 TVQSSSPACLQPK-----YFKLTVYSTKLT-RIL-----ILVRICGGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMI 160 (271)
Q Consensus 93 ~~~~~~~~~~~~~-----~~~~~~~~~~~~-~l~-----~~v~i~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l 160 (271)
+............ ......++..+. .++ +.|++.+-. .-..+..+.+|...|.+++|+|. +..+|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~---~~~~l 337 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH---NETIL 337 (430)
T ss_dssp TTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSS---CTTEE
T ss_pred CCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCC---CCCEE
Confidence 9533211333222 224445556565 354 788882211 11567788889999999999995 34689
Q ss_pred EEEeCCCeEEEEEcCCCce------------eeeeeeccCCCCeEEEEEecCCC-EEEEEECCCcEEEEEeCC
Q psy13856 161 ASCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 161 ~s~~~dg~i~iwd~~~~~~------------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~v~iw~~~~ 220 (271)
++++.|+.|++||+..... .......+|...|++++|+|++. +|++++.||.|+||++..
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 9999999999999987221 11556678999999999999998 899999999999999974
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.1e-21 Score=160.60 Aligned_cols=175 Identities=9% Similarity=0.011 Sum_probs=129.7
Q ss_pred EEEccCCCeEEeccc--------------e-eeeccccccccccceEEEEcC--CCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 38 LISCDTQAHIGIRST--------------I-SLLQGSVYLRRESNKAGALSP--KLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 38 l~s~s~d~~i~lwd~--------------~-~~~~~h~~~~~~~i~~~~~s~--~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
+++++.|++|++|+. + ....+|.+. |.+++|+| +++++++++.|++|++||+ .+++
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~s~s~dg~i~~wd~---~~~~ 160 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANE----IIYMYGHNEVNTEYFIWADNRGTIGFQSY---EDDS 160 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSC----EEEEECCC---CCEEEEEETTCCEEEEES---SSSC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCC----EEEEEcCCCCCCCEEEEEeCCCcEEEEEC---CCCc
Confidence 999999999999976 1 111244466 99999999 9999999999999999999 5565
Q ss_pred eeecc------ceeeEEEeeccceee-----eEEEEeeCCceEEe-EEecC-CCcceEEEEEccCCCCCCcEEEEEeCCC
Q psy13856 101 CLQPK------YFKLTVYSTKLTRIL-----ILVRICGGDKWIEE-TKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDR 167 (271)
Q Consensus 101 ~~~~~------~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~-~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~~~dg 167 (271)
+.... ......+++++.+++ +.|++.+....... ..+.+ |.+.|.+++|+| ++.+|++++ |+
T Consensus 161 ~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~----~g~~l~s~~-~~ 235 (343)
T 3lrv_A 161 QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD----NGYWMVVEC-DQ 235 (343)
T ss_dssp EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT----TSSEEEEEE-SS
T ss_pred EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC----CCCEEEEEe-CC
Confidence 54332 234556777788887 88888222211344 66777 999999999999 699999999 55
Q ss_pred eEEEEEcCCCceeeeeeecc---CCCCeE--EEEEecCCCEEEEEEC-CCcEEEEEeCCC-CceeE
Q psy13856 168 KVIIWTSNDYVTWTPFIMNT---FDDVVW--NVSWSLTGDILTVSCG-DNSVSLWKENTD-GAWQC 226 (271)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~---h~~~v~--~v~~~~~g~~l~s~s~-D~~v~iw~~~~~-~~~~~ 226 (271)
.|++||+++... ...+.. |...+. +++|+|+|.+|++++. |+.+++|++... ..|..
T Consensus 236 ~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 236 TVVCFDLRKDVG--TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp BEEEEETTSSTT--CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred eEEEEEcCCCCc--ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 999999998764 333322 333443 6999999999999998 999999999654 34665
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.3e-21 Score=163.80 Aligned_cols=151 Identities=9% Similarity=-0.044 Sum_probs=121.2
Q ss_pred eeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-----ceeeEEEeeccceee-----eEEE
Q psy13856 55 LLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-----YFKLTVYSTKLTRIL-----ILVR 124 (271)
Q Consensus 55 ~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~-----~~v~ 124 (271)
.+..|... |.+++|+|++++|++++.|+.|++||. ..++..... ......++.++ .++ +.++
T Consensus 242 ~~~~~~~~----i~~~~~~~~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~ 313 (425)
T 1r5m_A 242 KLIGHHGP----ISVLEFNDTNKLLLSASDDGTLRIWHG---GNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVR 313 (425)
T ss_dssp EECCCSSC----EEEEEEETTTTEEEEEETTSCEEEECS---SSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred eeccCCCc----eEEEEECCCCCEEEEEcCCCEEEEEEC---CCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEE
Confidence 34456666 899999999999999999999999998 444443332 22344455556 544 7888
Q ss_pred EeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc--------------------eeeeee
Q psy13856 125 ICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--------------------TWTPFI 184 (271)
Q Consensus 125 i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~ 184 (271)
+.+....+.+..+..|...|.+++|+| ++.+|++++.||.|++||+++.. . ...
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~----~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 387 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQ----DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL--YAS 387 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECT----TSSEEEEEETTSCEEEEECHHHHC--------------CEECCE--EEE
T ss_pred EEECCCCcEeEecccCCccEEEEEEcC----CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchh--hhh
Confidence 833222277888889999999999999 69999999999999999998765 3 667
Q ss_pred eccCCC--CeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 185 MNTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 185 ~~~h~~--~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+..|.. .|.+++|+|++.+|++++.||.|++|+++
T Consensus 388 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 388 YQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 788866 99999999999999999999999999985
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.9e-22 Score=167.92 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=144.4
Q ss_pred cCCCCC-CCEEEEccCCCeEEeccc---e------ee-----eccccccccccceEEEEcCC-CCeEEEEeCCCcEEEEE
Q psy13856 29 ESPLRI-GHTLISCDTQAHIGIRST---I------SL-----LQGSVYLRRESNKAGALSPK-LNRSATSSFHEAAKHLG 92 (271)
Q Consensus 29 ~~~~~~-g~~l~s~s~d~~i~lwd~---~------~~-----~~~h~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~~~d 92 (271)
....|+ +.+|++++.|+.|++||+ . .. +..|... |.+++|+|+ +.+|++++.|+.|++||
T Consensus 119 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~~~dg~v~iwd 194 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE----VISLAWNQSLAHVFASAGSSNFASIWD 194 (416)
T ss_dssp EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC----CCEEEECSSCTTEEEEESSSSCEEEEE
T ss_pred EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC----eeEEEeCCCCCcEEEEEcCCCCEEEEE
Confidence 334466 889999999999999998 2 11 2467777 999999998 78999999999999999
Q ss_pred eecCCCCceeeccc-----------eeeEEEeecc-ceee-----e---EEEEeeCCc-eEEeEEec-CCCcceEEEEEc
Q psy13856 93 TVQSSSPACLQPKY-----------FKLTVYSTKL-TRIL-----I---LVRICGGDK-WIEETKLE-NHSDWVRDVAWA 150 (271)
Q Consensus 93 ~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~l~-----~---~v~i~~~~~-~~~~~~~~-~h~~~v~~v~~~ 150 (271)
. ..++...... .....++.++ ..++ + .|++.+... ......+. +|...|.+++|+
T Consensus 195 ~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s 271 (416)
T 2pm9_A 195 L---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWC 271 (416)
T ss_dssp T---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEEC
T ss_pred C---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeC
Confidence 8 5555554331 2334455554 3455 3 777722111 14556677 899999999999
Q ss_pred cCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCC-CEEEEEECCCcEEEEEeCCCC
Q psy13856 151 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 151 p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~v~iw~~~~~~ 222 (271)
|. ++.+|++++.|+.|++||+++++. ...+.+|...|.+++|+|++ .+|++++.|+.|++|++....
T Consensus 272 ~~---~~~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 272 HQ---DEHLLLSSGRDNTVLLWNPESAEQ--LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SS---CSSCEEEEESSSEEEEECSSSCCE--EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CC---CCCeEEEEeCCCCEEEeeCCCCcc--ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 95 689999999999999999998876 77788999999999999998 899999999999999998653
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.5e-21 Score=186.24 Aligned_cols=198 Identities=13% Similarity=0.175 Sum_probs=155.9
Q ss_pred ceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 24 IETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 24 ~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
..++.....|+|+++++|+.||+|++||. +..+.+|... |.+++|+|++++|++++.|++|++||. .+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~~~d~~v~vwd~---~~ 688 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDE----VLCCAFSSDDSYIATCSADKKVKIWDS---AT 688 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEET---TT
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCC----EEEEEEecCCCEEEEEeCCCeEEEEEC---CC
Confidence 33455556679999999999999999998 6778899999 999999999999999999999999999 66
Q ss_pred Cceeecc-ce----eeEEEeec--cceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 99 PACLQPK-YF----KLTVYSTK--LTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 99 ~~~~~~~-~~----~~~~~~~~--~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
++++... .+ ....++.+ ...++ +.+++++.........+.+|.+.|.+++|+| ++.++++|+.|
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp----~~~~l~s~s~d 764 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP----DDELLASCSAD 764 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS----STTEEEEEESS
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec----CCCEEEEEECC
Confidence 7666554 22 33444443 23444 6788832222267888899999999999999 69999999999
Q ss_pred CeEEEEEcCCCceee-----------------------------------------------------eeeeccCCCCeE
Q psy13856 167 RKVIIWTSNDYVTWT-----------------------------------------------------PFIMNTFDDVVW 193 (271)
Q Consensus 167 g~i~iwd~~~~~~~~-----------------------------------------------------~~~~~~h~~~v~ 193 (271)
|.|++||++++.... .....+|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 999999987653210 001126788999
Q ss_pred EEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 194 NVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 194 ~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
+++|+|++.++++++.|+.|++|++.++ ..+..+.+|..
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~h~~ 883 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSR---LKVADCRGHLS 883 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTT---EEEEEECCCSS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCC---ceeeecCCCcc
Confidence 9999999999999999999999999876 56666666554
No 94
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=6.9e-21 Score=155.03 Aligned_cols=189 Identities=16% Similarity=0.096 Sum_probs=139.2
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeee--ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLL--QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~--~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
+++ +||+| .|++|+|||. ++.+ .+|... |.+++|+|++++|++|+.|++|++|+. ++++++...
T Consensus 35 ~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~----V~~v~~~~~~~~l~sgs~Dg~v~iw~~---~~~~~~~~~ 105 (318)
T 4ggc_A 35 SGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEY----ISSVAWIKEGNYLAVGTSSAEVQLWDV---QQQKRLRNM 105 (318)
T ss_dssp TTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCC----EEEEEECTTSSEEEEEETTSEEEEEET---TTTEEEEEE
T ss_pred CCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCe----EEEEEECCCCCEEEEEECCCcEEEeec---CCceeEEEe
Confidence 454 66665 5899999998 3433 567778 999999999999999999999999999 777776655
Q ss_pred -ce--eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCC
Q psy13856 106 -YF--KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 176 (271)
Q Consensus 106 -~~--~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 176 (271)
.+ ........+..++ +.+.+ ...........+.+|...+..+.+++ ++.++++++.|+.|++||+++
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP----DGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT----TSSEEEEEETTSCEEEEESSC
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC----CCCEEEEEecCcceeEEECCC
Confidence 22 2333444455555 55555 32222356778889999999999999 689999999999999999976
Q ss_pred Ccee----------------------------------------------eeeeeccCCCCeEEEEEecCCCEEEEEE--
Q psy13856 177 YVTW----------------------------------------------TPFIMNTFDDVVWNVSWSLTGDILTVSC-- 208 (271)
Q Consensus 177 ~~~~----------------------------------------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s-- 208 (271)
++.. .......+...+..+.|+|++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 3210 0001112345677888888888877765
Q ss_pred CCCcEEEEEeCCCCceeEEEEecccchhh
Q psy13856 209 GDNSVSLWKENTDGAWQCITEMGKTSEQR 237 (271)
Q Consensus 209 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 237 (271)
.|+.|++||++++ +++.++.+|....
T Consensus 262 ~d~~i~iwd~~~~---~~~~~l~gH~~~V 287 (318)
T 4ggc_A 262 AQNQLVIWKYPTM---AKVAELKGHTSRV 287 (318)
T ss_dssp TTCCEEEEETTTC---CEEEEECCCSSCE
T ss_pred CCCEEEEEECCCC---cEEEEEcCCCCCE
Confidence 6899999999877 7788888886653
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-20 Score=162.03 Aligned_cols=195 Identities=9% Similarity=0.031 Sum_probs=148.5
Q ss_pred ecccCCCCCCCEE-EEccCCCeEEeccc-------eeeec--cccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeec
Q psy13856 26 TYTESPLRIGHTL-ISCDTQAHIGIRST-------ISLLQ--GSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQ 95 (271)
Q Consensus 26 ~~~~~~~~~g~~l-~s~s~d~~i~lwd~-------~~~~~--~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~ 95 (271)
+......|++++| ++|+.|+.|++||+ +..+. .|... |.+++|+|++++|++|+.|+.+++|++.+
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~----v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKR----PNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSC----EEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCC----ceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 3444556799985 99999999999997 34444 45566 89999999999999999999999999843
Q ss_pred CCCCc-eeecc-----ceeeEEEeec---cceee-----eEEEE--eeCCceEEeEE-ecCCCcceEEEEEccCCCCCCc
Q psy13856 96 SSSPA-CLQPK-----YFKLTVYSTK---LTRIL-----ILVRI--CGGDKWIEETK-LENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 96 ~~~~~-~~~~~-----~~~~~~~~~~---~~~l~-----~~v~i--~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~~ 158 (271)
+.... +.... ......++.+ +++++ +.|++ ...+ ..+.. +.+|...|.+++|+ + +.
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~h~~~v~~~~~s-d----~~ 253 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--FIVDKWLFGHKHFVSSICCG-K----DY 253 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--TCEEEECCCCSSCEEEEEEC-S----TT
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--ceeeeeecCCCCceEEEEEC-C----CC
Confidence 33222 11122 2245567777 76776 77888 3334 34444 56899999999999 6 88
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeeeeec-------------------------cCCCCeEEEEEecCCCEEEEEE-CCCc
Q psy13856 159 MIASCSQDRKVIIWTSNDYVTWTPFIMN-------------------------TFDDVVWNVSWSLTGDILTVSC-GDNS 212 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------~h~~~v~~v~~~~~g~~l~s~s-~D~~ 212 (271)
+|++|+.|+.|++||+++++. ...+. .....|.+++|+|++.+|++++ .|+.
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKN--LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCE--EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred EEEEEeCCCeEEEEECCCCcE--eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 999999999999999998875 33332 2345789999999999999999 8999
Q ss_pred EEEEEe--CCCCceeEEEEeccc
Q psy13856 213 VSLWKE--NTDGAWQCITEMGKT 233 (271)
Q Consensus 213 v~iw~~--~~~~~~~~~~~~~~~ 233 (271)
|++|++ ..++.+..+..+..+
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIITFP 354 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEECS
T ss_pred EEEEEeccCCCCceeeccEeccC
Confidence 999999 556667777777665
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.2e-20 Score=154.83 Aligned_cols=195 Identities=10% Similarity=0.041 Sum_probs=151.1
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCC-----CcEEEEEeecC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH-----EAAKHLGTVQS 96 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d-----~~i~~~d~~~~ 96 (271)
......|++++|++++.|+.|++||+ +..+. |... +.+++|+|+++++++++.+ +.+++|+....
T Consensus 78 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~----v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 78 WSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVP----VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSC----EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCC----eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 34445579999999999999999998 44444 6777 9999999999999999999 99999998543
Q ss_pred CCCceeecc---------------ceeeEEEeeccceee-----eEEEEeeCCc-eEEeEEecCCCcceEEEEEccCCCC
Q psy13856 97 SSPACLQPK---------------YFKLTVYSTKLTRIL-----ILVRICGGDK-WIEETKLENHSDWVRDVAWAPSWGL 155 (271)
Q Consensus 97 ~~~~~~~~~---------------~~~~~~~~~~~~~l~-----~~v~i~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~ 155 (271)
......... ......++.+++.++ +.|++.+... ......+..|...|.+++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---- 228 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP---- 228 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT----
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC----
Confidence 322111110 223344555676666 7788822221 377888899999999999999
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC--------------cEEEEEeCCC
Q psy13856 156 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN--------------SVSLWKENTD 221 (271)
Q Consensus 156 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~--------------~v~iw~~~~~ 221 (271)
++.+|++++.|+.|++||+++... ...+. +...+.+++|+|++.++++++.++ .+++||..++
T Consensus 229 ~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 229 DLTYFITSSRDTNSFLVDVSTLQV--LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCE--EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred CCCEEEEecCCceEEEEECCCCce--eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 699999999999999999998875 34444 778999999999999999999988 8999998877
Q ss_pred CceeEEEEecccchh
Q psy13856 222 GAWQCITEMGKTSEQ 236 (271)
Q Consensus 222 ~~~~~~~~~~~~~~~ 236 (271)
+.+..+.+|...
T Consensus 306 ---~~~~~~~~~~~~ 317 (369)
T 3zwl_B 306 ---EEIGRVQGHFGP 317 (369)
T ss_dssp ---CEEEEEECCSSC
T ss_pred ---cchhheecccCc
Confidence 566666665544
No 97
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=1e-21 Score=164.56 Aligned_cols=181 Identities=13% Similarity=0.137 Sum_probs=133.6
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcEEEEEeecCCC-Cc
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAAKHLGTVQSSS-PA 100 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~~~d~~~~~~-~~ 100 (271)
......|++.+|++|+.|+.|++||+ +..+.+|... |.+++|+|+++ ++++++.|+.|++||+..... +.
T Consensus 167 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~----v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 242 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAK----VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNS 242 (383)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSC----EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTC
T ss_pred EEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCc----EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccc
Confidence 33444579999999999999999998 7778899999 99999999998 999999999999999953221 34
Q ss_pred eeeccc----eeeEEEee-ccceee-----eEEEEeeCCceEEeEEecCC-------Cc----------ceEEEEEccCC
Q psy13856 101 CLQPKY----FKLTVYST-KLTRIL-----ILVRICGGDKWIEETKLENH-------SD----------WVRDVAWAPSW 153 (271)
Q Consensus 101 ~~~~~~----~~~~~~~~-~~~~l~-----~~v~i~~~~~~~~~~~~~~h-------~~----------~v~~v~~~p~~ 153 (271)
++.... .....++. ++..++ +.+++.+.........+.+| .. .+..++|+|
T Consensus 243 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-- 320 (383)
T 3ei3_B 243 YIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-- 320 (383)
T ss_dssp EEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC--
T ss_pred eEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC--
Confidence 444332 24455666 677777 78888222111233333333 22 333466666
Q ss_pred CCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc--CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 154 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 154 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
++.+ +|+.|+.|++||+.+++. ...+.+ |...+.+++|+|++.+|++++ |+.|++||+++
T Consensus 321 --dg~~--s~s~d~~i~iwd~~~~~~--~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 321 --DDQL--LLNDKRTIDIYDANSGGL--VHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp --CTTT--CTTCCCCEEEEETTTCCE--EEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred --Cccc--ccCCCCeEEEEecCCCce--eeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 4555 778999999999998886 556655 567788889999999999997 99999999874
No 98
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=2.2e-21 Score=160.76 Aligned_cols=222 Identities=11% Similarity=0.019 Sum_probs=148.9
Q ss_pred cceeEEee-ceeEeeccccc------------cceecccCCCCCCCEEEEccCCCeEEeccc----eeeecccccccccc
Q psy13856 4 KEWLLVSC-DGLLMTLKPTL------------EIETYTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRES 66 (271)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~ 66 (271)
+.+|+..+ ||.+..+.... ...+......|++++|++|+.|+.|++||+ ...+..|...
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---- 129 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAP---- 129 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC----
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCc----
Confidence 35566644 67666554221 112334445579999999999999999999 4456778888
Q ss_pred ceEEEE--cCCCCeEEEEeCCCcEEEEEeecCCCCceeecccee--eEEEeeccceee-----eEEEE--eeCCceEEeE
Q psy13856 67 NKAGAL--SPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFK--LTVYSTKLTRIL-----ILVRI--CGGDKWIEET 135 (271)
Q Consensus 67 i~~~~~--s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~l~-----~~v~i--~~~~~~~~~~ 135 (271)
|.+++| +|++++|++++.|+.|++||+ .+++.+...... ..........++ +.+.+ ..... ....
T Consensus 130 v~~~~~~~~~~~~~l~~~~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~ 205 (368)
T 3mmy_A 130 VKTIHWIKAPNYSCVMTGSWDKTLKFWDT---RSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP-SEFR 205 (368)
T ss_dssp EEEEEEEECSSCEEEEEEETTSEEEEECS---SCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC-EEEE
T ss_pred eEEEEEEeCCCCCEEEEccCCCcEEEEEC---CCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc-chhh
Confidence 999999 899999999999999999999 555554443221 111111222222 55555 12221 2222
Q ss_pred Ee-cCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCce-eeeeeeccCCC------------CeEEEEEecCC
Q psy13856 136 KL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT-WTPFIMNTFDD------------VVWNVSWSLTG 201 (271)
Q Consensus 136 ~~-~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~h~~------------~v~~v~~~~~g 201 (271)
.. ..+...+.++.+.+........+++++.||.|++||++.... .....+..|.. +|.+++|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 206 RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT
T ss_pred hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC
Confidence 22 223445566666552111223499999999999999988632 12455666665 79999999999
Q ss_pred CEEEEEECCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 202 DILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 202 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
.+|++++.||.|++||++++ +++..+..|...
T Consensus 286 ~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~ 317 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDAR---TKLKTSEQLDQP 317 (368)
T ss_dssp CCEEEEETTSCEEEEETTTT---EEEEECCCCSSC
T ss_pred CEEEEEccCCeEEEEECCCC---cEEEEecCCCCC
Confidence 99999999999999999876 677777766543
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.3e-22 Score=164.75 Aligned_cols=180 Identities=10% Similarity=0.010 Sum_probs=134.2
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEee------
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTV------ 94 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~------ 94 (271)
....+...++.++++|+.||.|++||+ +..+. ... |.++.|+|+ +++++.|+++++|+..
T Consensus 39 ~~~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~----v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 39 ELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPN----PRTGGEHPA---IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EECSSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EEC----CCTTCCCCS---EEEECSTTEEEEEETTTEEEEE
T ss_pred hhhhhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCC----ceeeeeCCc---eEEecCCCeEEEEEccCceEEe
Confidence 334455578899999999999999998 33333 345 788889988 9999999999999752
Q ss_pred cCCCCceeeccc------eeeEEEee--ccceee-----eEEEE--eeCCceEEeEEe-cCCCcceEEEEEccCCCCCCc
Q psy13856 95 QSSSPACLQPKY------FKLTVYST--KLTRIL-----ILVRI--CGGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 95 ~~~~~~~~~~~~------~~~~~~~~--~~~~l~-----~~v~i--~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~ 158 (271)
+..+++.+.... .....+.+ ++++++ +.+++ ...+ +..... ..|...+.+++|+| ++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~--~~~~~~~~~~~~~i~~~~~~p----dg~ 183 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD--SQYIVHSAKSDVEYSSGVLHK----DSL 183 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS--CEEEEECCCSSCCCCEEEECT----TSC
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC--cEEEEEecCCCCceEEEEECC----CCC
Confidence 112333333221 23344445 566666 78888 2333 444444 34556899999999 799
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeeeeecc-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 159 MIASCSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
+|++|+.||.|++||++++... ...+.. |.++|.+++|+|+|.+|++++ |+.|++||++...
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred EEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 9999999999999999998752 156666 999999999999999999999 5599999998764
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=3.1e-21 Score=176.45 Aligned_cols=193 Identities=12% Similarity=0.073 Sum_probs=150.8
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC-c
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP-A 100 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~-~ 100 (271)
......|++++|++|+.||.|++||+ +..+.+|... |.+++|+|++.+|++++.|+.|++|+. ..+ .
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~dg~i~vw~~---~~~~~ 131 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY----IRSIAVHPTKPYVLSGSDDLTVKLWNW---ENNWA 131 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEECSSSSEEEEEETTSEEEEEEG---GGTSE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC----EEEEEEeCCCCEEEEEcCCCEEEEEEC---CCCce
Confidence 34444579999999999999999998 6778889999 999999999999999999999999998 433 3
Q ss_pred eeecc-----ceeeEEEee-ccceee-----eEEEEeeCCceEEeEEecCC-CcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 101 CLQPK-----YFKLTVYST-KLTRIL-----ILVRICGGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 101 ~~~~~-----~~~~~~~~~-~~~~l~-----~~v~i~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
..... ......+++ ++..++ +.|++.+.........+..+ ...+.+++|+|.. ++.++++++.||.
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~l~~~~~dg~ 209 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP--DKPYMITASDDLT 209 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCST--TCCEEEEECTTSE
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECC--CCCEEEEEeCCCE
Confidence 33322 123445555 556666 77888221111334444444 4889999999832 4889999999999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
|++||.+++.. ...+.+|...|.+++|+|++.+|++++.||.|++||+.++ .....+..+
T Consensus 210 i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~ 269 (814)
T 3mkq_A 210 IKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLNVG 269 (814)
T ss_dssp EEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---SEEEEECCS
T ss_pred EEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEeecC
Confidence 99999998776 6778889999999999999999999999999999999875 445555444
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=168.94 Aligned_cols=177 Identities=14% Similarity=0.049 Sum_probs=124.3
Q ss_pred cccceecccCCCCCCCEEEEccCCCeEEeccc--eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 21 TLEIETYTESPLRIGHTLISCDTQAHIGIRST--ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~--~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
.++.-+......|||+++||++.|++|+ |. .+.+.+|... |++++|+|+| .++.+.+|+. +.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~----v~~V~FsPdg-------~~~~~~~~~~---~~ 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKN----LFHVKEFPLE-------FENKLDFELA---QQ 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGG----TEEEEEECCC-------CCCTTTTSCC---CS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCcc----EEEEEECCCC-------CcceEEEEeC---CC
Confidence 3344556666677999999999999998 55 4445666666 6777777666 3444444432 21
Q ss_pred Cceee---ccceeeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCc-----ceEEEEEccCCCCCCcEEEEEeC
Q psy13856 99 PACLQ---PKYFKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSD-----WVRDVAWAPSWGLSKCMIASCSQ 165 (271)
Q Consensus 99 ~~~~~---~~~~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~~~~l~s~~~ 165 (271)
..... ........|+++++.++ +.+++++.. .++..+. |.. .|.+++|+| ||++|++|+.
T Consensus 77 ~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~--~~l~~l~-~~~~~~~~sv~svafSP----DG~~LAsgs~ 149 (588)
T 2j04_A 77 NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN--KMLTNLD-SKGNLSSRTYHCFEWNP----IESSIVVGNE 149 (588)
T ss_dssp SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT--EEEEECC-CSSCSTTTCEEEEEECS----SSSCEEEEET
T ss_pred ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC--ceeeecc-CCCccccccEEEEEEcC----CCCEEEEEcC
Confidence 11111 11335556666666666 566663333 3555566 665 499999999 7999999999
Q ss_pred CCeEEEEEcCCCce-----eeeeee----ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 166 DRKVIIWTSNDYVT-----WTPFIM----NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 166 dg~i~iwd~~~~~~-----~~~~~~----~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
||+|++||+..+.. .....+ .+|.+.|.+++|+|+| +++++.|++|++|++..+.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 99999999988642 113444 6788899999999999 8889999999999998764
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.2e-21 Score=165.32 Aligned_cols=155 Identities=12% Similarity=0.083 Sum_probs=120.4
Q ss_pred ceEEEEcCCCCeE-EEEeCCCcEEEEEeecCCCCceeecc---c----eeeEEEeeccceee-----eEEEEe--eCCc-
Q psy13856 67 NKAGALSPKLNRS-ATSSFHEAAKHLGTVQSSSPACLQPK---Y----FKLTVYSTKLTRIL-----ILVRIC--GGDK- 130 (271)
Q Consensus 67 i~~~~~s~~~~~l-~s~s~d~~i~~~d~~~~~~~~~~~~~---~----~~~~~~~~~~~~l~-----~~v~i~--~~~~- 130 (271)
|.+++|+|++++| ++++.|+.|++|+... ..+.++... . .....++.+++.++ +.+.+. ....
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDK-TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECS-SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcC-CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 8999999999996 8999999999999930 045555443 1 23455666777777 556661 2221
Q ss_pred eE-EeEEecCCCcceEEEEEccCCCCC---CcEEEEEeCCCeEEEEEcCCCceeeeee-eccCCCCeEEEEEecCCCEEE
Q psy13856 131 WI-EETKLENHSDWVRDVAWAPSWGLS---KCMIASCSQDRKVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILT 205 (271)
Q Consensus 131 ~~-~~~~~~~h~~~v~~v~~~p~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~h~~~v~~v~~~~~g~~l~ 205 (271)
.. ....+.+|...|.+++|+| + +.+|++|+.|+.|++||++++.. ... +.+|...|.+++|+ ++.+|+
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp----~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIK----DSDGHQFIITSDRDEHIKISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEE----CTTSCEEEEEEETTSCEEEEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEE
T ss_pred ccccceeeecccCceEEEEEcC----CCCCCcEEEEEcCCCcEEEEECCCCce--eeeeecCCCCceEEEEEC-CCCEEE
Confidence 01 3336778999999999999 7 88999999999999999998775 444 66899999999999 999999
Q ss_pred EEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 206 VSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 206 s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
+++.|+.|++||++++ +++..+..
T Consensus 257 s~~~d~~v~vwd~~~~---~~~~~~~~ 280 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTG---KNLSTFDY 280 (450)
T ss_dssp EEESSSEEEEEETTTC---CEEEEEEC
T ss_pred EEeCCCeEEEEECCCC---cEeeeecc
Confidence 9999999999999877 45555543
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=2.3e-20 Score=165.24 Aligned_cols=189 Identities=14% Similarity=0.119 Sum_probs=150.4
Q ss_pred ecccCCCC--CCCEEEEccCCCeEEeccc-------------eeeeccccccccccceEEEEcCCCCeEEEEeCC----C
Q psy13856 26 TYTESPLR--IGHTLISCDTQAHIGIRST-------------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH----E 86 (271)
Q Consensus 26 ~~~~~~~~--~g~~l~s~s~d~~i~lwd~-------------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d----~ 86 (271)
+......| ++++|++|+.||.|++||+ ...+..|... |.+++|+|++++|++++.+ +
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~~~~~~~~ 142 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGP----ISDISWDFEGRRLCVVGEGRDNFG 142 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSC----EEEEEECTTSSEEEEEECCSSCSE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccccc----EEEEEEeCCCCEEEEeccCCCCcc
Confidence 34444557 9999999999999999998 2345667888 9999999999999999988 6
Q ss_pred cEEEEEeecCCCCceeecc-----ceeeEEEeeccc-eee-----eEEEEeeCCceEEeEEecCCCc---ceEEEEEccC
Q psy13856 87 AAKHLGTVQSSSPACLQPK-----YFKLTVYSTKLT-RIL-----ILVRICGGDKWIEETKLENHSD---WVRDVAWAPS 152 (271)
Q Consensus 87 ~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-~l~-----~~v~i~~~~~~~~~~~~~~h~~---~v~~v~~~p~ 152 (271)
.|++|+. ++..... ......++.++. .++ +.+++.+....+....+.+|.. .|.+++|+|
T Consensus 143 ~v~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~- 216 (615)
T 1pgu_A 143 VFISWDS-----GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP- 216 (615)
T ss_dssp EEEETTT-----CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-
T ss_pred EEEEEEC-----CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-
Confidence 8888884 2233222 224445556665 444 7888844344478888999999 999999999
Q ss_pred CCCC-CcEEEEEeCCCeEEEEEcCCCceeeeeee-c---cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEE
Q psy13856 153 WGLS-KCMIASCSQDRKVIIWTSNDYVTWTPFIM-N---TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 227 (271)
Q Consensus 153 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~---~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~ 227 (271)
+ +.+|++++.|+.|++||+++++. ...+ . .|...|.+++|+ ++.+|++++.|+.|++||++++ +.+
T Consensus 217 ---~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~---~~~ 287 (615)
T 1pgu_A 217 ---DSGEFVITVGSDRKISCFDGKSGEF--LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS---KCV 287 (615)
T ss_dssp ---TTCCEEEEEETTCCEEEEETTTCCE--EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT---EEE
T ss_pred ---CCCCEEEEEeCCCeEEEEECCCCCE--eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC---cEE
Confidence 6 99999999999999999998876 5555 5 899999999999 9999999999999999999876 556
Q ss_pred EEeccc
Q psy13856 228 TEMGKT 233 (271)
Q Consensus 228 ~~~~~~ 233 (271)
..+..+
T Consensus 288 ~~~~~~ 293 (615)
T 1pgu_A 288 QKWTLD 293 (615)
T ss_dssp EEEECC
T ss_pred EEEcCC
Confidence 666554
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=5.7e-21 Score=162.87 Aligned_cols=188 Identities=13% Similarity=0.133 Sum_probs=141.0
Q ss_pred ecccCCCCC-CCEEEEccCCCeEEeccc---------------eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcE
Q psy13856 26 TYTESPLRI-GHTLISCDTQAHIGIRST---------------ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAA 88 (271)
Q Consensus 26 ~~~~~~~~~-g~~l~s~s~d~~i~lwd~---------------~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i 88 (271)
+......|+ +.+|++++.||.|++|++ +..+.+|... |.+++|+|++. +|++|+.|+.|
T Consensus 131 v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~----v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE----GYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSC----CCCEEECTTSTTEEEEECTTSCE
T ss_pred EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCC----eEEEEeCCCCCCeEEEEeCCCeE
Confidence 333444455 679999999999999997 3445688888 99999999988 99999999999
Q ss_pred EEEEeecCCCC-ce---eecc-c----eeeEEEee-ccceee-----eEEEEeeCCc---eEEeEEecCCCcceEEEEEc
Q psy13856 89 KHLGTVQSSSP-AC---LQPK-Y----FKLTVYST-KLTRIL-----ILVRICGGDK---WIEETKLENHSDWVRDVAWA 150 (271)
Q Consensus 89 ~~~d~~~~~~~-~~---~~~~-~----~~~~~~~~-~~~~l~-----~~v~i~~~~~---~~~~~~~~~h~~~v~~v~~~ 150 (271)
++|++..+... .. .... . .....++. ....++ +.|++.+... ......+..|...|.+++|+
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 99998421111 11 1111 1 23344555 345555 7888822111 14566777899999999999
Q ss_pred cCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEECCCcEEEEEeCCC
Q psy13856 151 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 151 p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~v~iw~~~~~ 221 (271)
|. ...++++|+.||.|++||++..... ...+..|...|.+++|+|++. +|++++.|+.|+|||+...
T Consensus 287 p~---~~~~l~tg~~dg~v~vwd~~~~~~~-~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 287 PY---SEFILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp SS---CTTEEEEEETTSEEEEEETTCTTSC-SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CC---CCCEEEEEeCCCeEEEEeCCCCCCC-eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 95 3447999999999999999984321 667788999999999999984 7999999999999999863
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.7e-21 Score=164.79 Aligned_cols=172 Identities=5% Similarity=0.013 Sum_probs=132.5
Q ss_pred CCCCCEEEEccCCCeEEeccc-----eeeecc--ccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 32 LRIGHTLISCDTQAHIGIRST-----ISLLQG--SVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~-----~~~~~~--h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
.+++.+|++|+.|+.|++||+ +..+.. |... |.+++|+|++++|++|+.|+.|++||+ +.+.++..
T Consensus 179 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~~~dg~i~iwd~---~~~~~~~~ 251 (437)
T 3gre_A 179 NEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGA----VSSICIDEECCVLILGTTRGIIDIWDI---RFNVLIRS 251 (437)
T ss_dssp CSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCC----EEEEEECTTSCEEEEEETTSCEEEEET---TTTEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCc----eEEEEECCCCCEEEEEcCCCeEEEEEc---CCccEEEE
Confidence 367899999999999999998 566666 7888 999999999999999999999999999 66777664
Q ss_pred c--ceeeEEEee--------ccceee-----eEEEEeeCCceEEeEEecC--------------------------CCcc
Q psy13856 105 K--YFKLTVYST--------KLTRIL-----ILVRICGGDKWIEETKLEN--------------------------HSDW 143 (271)
Q Consensus 105 ~--~~~~~~~~~--------~~~~l~-----~~v~i~~~~~~~~~~~~~~--------------------------h~~~ 143 (271)
. .....+.+. ++..++ +.|++++....+....+.+ |...
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 331 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNA 331 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGG
T ss_pred EecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCc
Confidence 4 222222222 244666 7888832221145555543 5566
Q ss_pred eEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc------------------------------------
Q psy13856 144 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------------------------------------ 187 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------ 187 (271)
|.+++|++ +.+|++|+.|+.|++||+.+++. ...+.+
T Consensus 332 v~~l~~~~-----~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (437)
T 3gre_A 332 LSTISVSN-----DKILLTDEATSSIVMFSLNELSS--SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSL 404 (437)
T ss_dssp GCCEEEET-----TEEEEEEGGGTEEEEEETTCGGG--CEEEECC--CCCEEEEEEEETTEEEEEEECC-----------
T ss_pred eEEEEECC-----ceEEEecCCCCeEEEEECCCccc--ceEEecccccCceEEEEEeecceEEEEEecccccccccCccc
Confidence 88888884 58999999999999999988764 233322
Q ss_pred -CCCCeEEEEEecC--CCEEEEEECCCcEEEEE
Q psy13856 188 -FDDVVWNVSWSLT--GDILTVSCGDNSVSLWK 217 (271)
Q Consensus 188 -h~~~v~~v~~~~~--g~~l~s~s~D~~v~iw~ 217 (271)
|.+.|++++|+++ +.+|++|+.||.|+||+
T Consensus 405 ~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 405 YHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 78999999999999995
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=1.6e-20 Score=157.90 Aligned_cols=184 Identities=11% Similarity=0.023 Sum_probs=136.1
Q ss_pred cccCCCC-CCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCC---CCeEEEEeCCCcEEEEEeecCCC
Q psy13856 27 YTESPLR-IGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPK---LNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 27 ~~~~~~~-~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~---~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
......| ++.+|++++.|+.|++||+ ......+... +.++.|+|. +.++++++.|+.|++||. .+
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~ 175 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET----VYSHHMSPVSTKHCLVAVGTRGPKVQLCDL---KS 175 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC----EEEEEECSSCSSCCEEEEEESSSSEEEEES---SS
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc----eeeeEeecCCCCCcEEEEEcCCCeEEEEeC---CC
Confidence 3334456 6779999999999999998 2222335666 889999984 459999999999999999 44
Q ss_pred Cceeecc-----ceeeEEEeeccce-ee-----eEEEEeeC-CceEEeEEe---------------cCCCcceEEEEEcc
Q psy13856 99 PACLQPK-----YFKLTVYSTKLTR-IL-----ILVRICGG-DKWIEETKL---------------ENHSDWVRDVAWAP 151 (271)
Q Consensus 99 ~~~~~~~-----~~~~~~~~~~~~~-l~-----~~v~i~~~-~~~~~~~~~---------------~~h~~~v~~v~~~p 151 (271)
+...... ......++.++.. ++ +.+++.+. ........+ .+|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 4444333 2234455666664 54 67777211 110123333 57889999999999
Q ss_pred CCCCCCcEEEEEeCCCeEEEEEcCCCce---------------------------------------------eeeeeec
Q psy13856 152 SWGLSKCMIASCSQDRKVIIWTSNDYVT---------------------------------------------WTPFIMN 186 (271)
Q Consensus 152 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~---------------------------------------------~~~~~~~ 186 (271)
++.+|++++.||.|++||++++.. .....+.
T Consensus 256 ----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 256 ----DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp ----TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred ----CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 699999999999999999976431 1134456
Q ss_pred cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 187 TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 187 ~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+|...|.+++|+|++.+|++++.||.|++|++++.
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 79999999999999999999999999999999876
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=1.6e-20 Score=156.13 Aligned_cols=172 Identities=15% Similarity=0.142 Sum_probs=126.0
Q ss_pred CCCCEE-EEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC-ceeecc
Q psy13856 33 RIGHTL-ISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP-ACLQPK 105 (271)
Q Consensus 33 ~~g~~l-~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~-~~~~~~ 105 (271)
++++.+ ++++.|++|++||. +..+. |... |.+++|+++. ++.+ .|+.+++||+ .+. +.+...
T Consensus 68 ~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~----v~~v~~~~~~--~~~~-~~~~i~i~d~---~~~~~~~~~~ 136 (355)
T 3vu4_A 68 HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAP----VKDLFLSREF--IVVS-YGDVISVFKF---GNPWKRITDD 136 (355)
T ss_dssp TTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSC----EEEEEECSSE--EEEE-ETTEEEEEES---STTCCBSSCC
T ss_pred CCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCc----eEEEEEcCCE--EEEE-EcCEEEEEEC---CCCceeeEEe
Confidence 455555 67888899999998 44444 5556 8999998764 4443 4789999998 444 343333
Q ss_pred ceeeEEEeeccceee-------eEEEEeeCCc---------------eEE-eEEecCCCcceEEEEEccCCCCCCcEEEE
Q psy13856 106 YFKLTVYSTKLTRIL-------ILVRICGGDK---------------WIE-ETKLENHSDWVRDVAWAPSWGLSKCMIAS 162 (271)
Q Consensus 106 ~~~~~~~~~~~~~l~-------~~v~i~~~~~---------------~~~-~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 162 (271)
..+..+.......++ +.|++.+... ..+ ...+.+|.+.|.+++|+| ++.+|++
T Consensus 137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~----~g~~l~s 212 (355)
T 3vu4_A 137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR----KSDMVAT 212 (355)
T ss_dssp EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT----TSSEEEE
T ss_pred ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC----CCCEEEE
Confidence 212222222223333 5666621111 012 678899999999999999 7999999
Q ss_pred EeCCCe-EEEEEcCCCceeeeeeec-c-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 163 CSQDRK-VIIWTSNDYVTWTPFIMN-T-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 163 ~~~dg~-i~iwd~~~~~~~~~~~~~-~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|+.|++ |++||+++++. ...+. + |...|++++|+|+|.+|++++.|++|++||++..
T Consensus 213 ~s~d~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EETTCSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EeCCCCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999998 99999999886 56665 5 9999999999999999999999999999999754
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.5e-20 Score=160.34 Aligned_cols=181 Identities=14% Similarity=0.138 Sum_probs=144.7
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-ce
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-YF 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~~ 107 (271)
++++|++|+.||.|++||. ...+.+|... |.+++| +++.|++|+.|+.|++||. .++++.... .+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~--~~~~l~sg~~dg~i~vwd~---~~~~~~~~~~~h 212 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS----VLCLQY--DERVIITGSSDSTVRVWDV---NTGEMLNTLIHH 212 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSC----EEEEEC--CSSEEEEEETTSCEEEEES---SSCCEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCc----EEEEEE--CCCEEEEEcCCCeEEEEEC---CCCcEEEEEcCC
Confidence 8999999999999999998 6778899999 999998 7889999999999999999 666666554 22
Q ss_pred ee--EEEeeccceee-----eEEEE--eeCC-ceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCC
Q psy13856 108 KL--TVYSTKLTRIL-----ILVRI--CGGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 177 (271)
Q Consensus 108 ~~--~~~~~~~~~l~-----~~v~i--~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 177 (271)
.. ......+..++ +.|++ ...+ .......+.+|...|.+++|+ +.++++|+.||.|++||++++
T Consensus 213 ~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~s~~~dg~i~vwd~~~~ 286 (435)
T 1p22_A 213 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD------DKYIVSASGDRTIKVWNTSTC 286 (435)
T ss_dssp CSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE------TTEEEEEETTSEEEEEETTTC
T ss_pred CCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC------CCEEEEEeCCCeEEEEECCcC
Confidence 22 22222344555 77787 2222 223446788999999999994 579999999999999999998
Q ss_pred ceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccchh
Q psy13856 178 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQ 236 (271)
Q Consensus 178 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 236 (271)
.. ...+.+|...|.+++|+ +.++++|+.|+.|++||++++ +++..+.+|...
T Consensus 287 ~~--~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~---~~~~~~~~h~~~ 338 (435)
T 1p22_A 287 EF--VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEEL 338 (435)
T ss_dssp CE--EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---CEEEEECCCSSC
T ss_pred cE--EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC---CEEEEEeCCcCc
Confidence 76 77788999999999984 689999999999999999877 666677666543
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=4.2e-21 Score=169.93 Aligned_cols=144 Identities=15% Similarity=0.143 Sum_probs=124.8
Q ss_pred CCEEEEccC-CCeEEeccc----e--eeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 35 GHTLISCDT-QAHIGIRST----I--SLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 35 g~~l~s~s~-d~~i~lwd~----~--~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
+.+|++++. |+.|++||+ . ..+.+|... |.+++|+|++++|++++.|+.|++|+. .
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~----v~~~~~s~~g~~l~~~~~dg~i~iw~~---~---------- 518 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK----PSYISISPSETYIAAGDVMGKILLYDL---Q---------- 518 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC----EEEEEECTTSSEEEEEETTSCEEEEET---T----------
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCc----eEEEEECCCCCEEEEcCCCCeEEEeeC---C----------
Confidence 789999999 999999999 2 567788888 999999999999999999999999998 2
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecC-CCcceEEEEEccCC------CCCCcEEEEEeCCCeEEEEEcCCC-ce
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLEN-HSDWVRDVAWAPSW------GLSKCMIASCSQDRKVIIWTSNDY-VT 179 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~-h~~~v~~v~~~p~~------~~~~~~l~s~~~dg~i~iwd~~~~-~~ 179 (271)
.+ +.+..+.+ |...|.+++|+|.. +.++.+|++++.||.|++||+.++ ..
T Consensus 519 --------------------~~--~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 576 (615)
T 1pgu_A 519 --------------------SR--EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI 576 (615)
T ss_dssp --------------------TT--EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC
T ss_pred --------------------CC--cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee
Confidence 23 45556667 99999999999910 002899999999999999999987 44
Q ss_pred eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 180 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
...+.+|...|++++|+|++. |++++.|+.|++|+++.
T Consensus 577 --~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 577 --IKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp --EEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred --chhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 677889999999999999999 99999999999999874
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.1e-20 Score=161.10 Aligned_cols=185 Identities=10% Similarity=0.122 Sum_probs=145.4
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCcee---ecc
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACL---QPK 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~---~~~ 105 (271)
++.+|++|+.||.|++||+ +..+.+|... |.+++|++ ..+++|+.|+.|++||.. ++... ...
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~l~~~~--~~l~s~s~dg~i~vwd~~---~~~~~~~~~~~ 252 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA----VLHLRFNN--GMMVTCSKDRSIAVWDMA---SPTDITLRRVL 252 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC----EEEEECCT--TEEEEEETTSCEEEEECS---SSSCCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc----EEEEEEcC--CEEEEeeCCCcEEEEeCC---CCCCceeeeEe
Confidence 8899999999999999998 6778899998 99999974 599999999999999984 33332 222
Q ss_pred -ce--eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCC
Q psy13856 106 -YF--KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 177 (271)
Q Consensus 106 -~~--~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 177 (271)
.+ .......+++.++ +.+++.+....+.+..+.+|...|.++.+++ .++++|+.||.|++||++++
T Consensus 253 ~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 253 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET------TEEEEEETTSCEEEEETTTC
T ss_pred cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC------CEEEEEeCCCeEEEEECCCC
Confidence 22 2222233566666 7888833333378888999999999999954 69999999999999999998
Q ss_pred ceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCc------eeEEEEecccchhh
Q psy13856 178 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA------WQCITEMGKTSEQR 237 (271)
Q Consensus 178 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~~~~~~~ 237 (271)
.. ...+.+|...|.+++| ++.+|++|+.||.|++||+..+.. ..++..+.+|....
T Consensus 327 ~~--~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v 388 (435)
T 1p22_A 327 AC--LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 388 (435)
T ss_dssp CE--EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CE--EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCe
Confidence 86 7788899999999999 788999999999999999965421 11566676665543
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=4.6e-22 Score=169.86 Aligned_cols=179 Identities=8% Similarity=0.048 Sum_probs=122.4
Q ss_pred CCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce--
Q psy13856 34 IGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF-- 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~-- 107 (271)
++.+|++|+.|++|++||+ ...+..+.. ....+.+++|+|++++|++|+.|+.|++||. ..........+
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~---~~~~~~~~~~h~~ 251 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDT-INIWFCSLDVSASSRMVVTGDNVGNVILLNM---DGKELWNLRMHKK 251 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSS-CSCCCCCEEEETTTTEEEEECSSSBEEEEES---SSCBCCCSBCCSS
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCC-CCccEEEEEECCCCCEEEEEeCCCcEeeecc---CcceeEEEecccc
Confidence 7889999999999999998 333322221 1112778999999999999999999999997 33222222222
Q ss_pred --eeEEEeeccc-eee-----eEEEEee--CC-ceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCC
Q psy13856 108 --KLTVYSTKLT-RIL-----ILVRICG--GD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 176 (271)
Q Consensus 108 --~~~~~~~~~~-~l~-----~~v~i~~--~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 176 (271)
....+++.+. .++ +.|++++ .. .........+|...|.+++|+| ++.+|++|+.|+.|++||+++
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp----dg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP----DGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT----TSSEEEEEESSSCEEEEESSS
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC----CCCeeEEEcCCCEEEEEECCC
Confidence 3344444544 344 6677722 11 0112233457999999999999 699999999999999999875
Q ss_pred Ccee-----------------------------------------------eee------------eeccCCCCeEEE-E
Q psy13856 177 YVTW-----------------------------------------------TPF------------IMNTFDDVVWNV-S 196 (271)
Q Consensus 177 ~~~~-----------------------------------------------~~~------------~~~~h~~~v~~v-~ 196 (271)
+... .+. ...+|...|.++ +
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~ 407 (435)
T 4e54_B 328 WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNE 407 (435)
T ss_dssp SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEE
T ss_pred CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEE
Confidence 3210 000 112455667776 6
Q ss_pred EecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 197 WSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 197 ~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|+|+|.+|++|+ |++|+||+++.+
T Consensus 408 fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 408 FNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp ECTTSSCEEEEC-SSEEEECCCC--
T ss_pred ECCCCCEEEEEc-CCcEEEEECCcC
Confidence 999999998876 789999998865
No 112
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=4.8e-21 Score=163.36 Aligned_cols=179 Identities=9% Similarity=0.104 Sum_probs=134.6
Q ss_pred cCCCCCC--CEEEEccCCCeEEeccc-e--------------------------------------------eeeccccc
Q psy13856 29 ESPLRIG--HTLISCDTQAHIGIRST-I--------------------------------------------SLLQGSVY 61 (271)
Q Consensus 29 ~~~~~~g--~~l~s~s~d~~i~lwd~-~--------------------------------------------~~~~~h~~ 61 (271)
....|++ ..|++++.|+.|++||+ . ....+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 3344566 78999999999999998 1 11367888
Q ss_pred cccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeec--------cc----eeeEEEeecc-ceee-----eEE
Q psy13856 62 LRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQP--------KY----FKLTVYSTKL-TRIL-----ILV 123 (271)
Q Consensus 62 ~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~--------~~----~~~~~~~~~~-~~l~-----~~v 123 (271)
. |.+++|+|++++|++| .|+.|++||+. ....++.. .. .....+++++ ..++ +.|
T Consensus 179 ~----v~~~~~~~~~~~l~s~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 179 H----INSISINSDYETYLSA-DDLRINLWHLE--ITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp C----CCEEEECTTSSEEEEE-CSSEEEEEETT--EEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred c----eEEEEEcCCCCEEEEe-CCCeEEEEECC--CCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 8 9999999999999998 89999999983 13333331 11 2445566666 6666 778
Q ss_pred EEeeCCceEE----eEEecCCCc------------ceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCC-Cceeeeeeec
Q psy13856 124 RICGGDKWIE----ETKLENHSD------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMN 186 (271)
Q Consensus 124 ~i~~~~~~~~----~~~~~~h~~------------~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~ 186 (271)
++.+...... ...+.+|.. .|.+++|+| ++.+|++++. +.|++||++. +.. ...+.
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~g~~l~~~~~-~~v~iwd~~~~~~~--~~~~~ 324 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH----SGRYMMTRDY-LSVKVWDLNMENRP--VETYQ 324 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT----TSSEEEEEES-SEEEEEETTCCSSC--SCCEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC----CCCEEEEeeC-CeEEEEeCCCCccc--cceee
Confidence 8822221133 577777776 899999999 6999999998 9999999987 554 55666
Q ss_pred cCCCC---------------eEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 187 TFDDV---------------VWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 187 ~h~~~---------------v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+|... +..++|+|++.+|++++.|+.|++||+.++
T Consensus 325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 67532 334999999999999999999999999876
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=1.8e-20 Score=159.23 Aligned_cols=183 Identities=15% Similarity=0.154 Sum_probs=139.5
Q ss_pred CCEEEEccCCCeEEeccc-----ee--eeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-c
Q psy13856 35 GHTLISCDTQAHIGIRST-----IS--LLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-Y 106 (271)
Q Consensus 35 g~~l~s~s~d~~i~lwd~-----~~--~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~ 106 (271)
+++|++|. |++|+|||. .. .+.+|... |++++|+|+|++|++|+.|+.|++||. .+++++... .
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~----V~sv~fspdg~~lasgs~Dg~v~iWd~---~~~~~~~~~~~ 187 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEY----ISSVAWIKEGNYLAVGTSSAEVQLWDV---QQQKRLRNMTS 187 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCC----EEEEEECTTSSEEEEEETTSCEEEEET---TTTEEEEEECC
T ss_pred CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCc----EEEEEECCCCCEEEEEECCCeEEEEEc---CCCcEEEEEeC
Confidence 34666664 899999998 33 34577788 999999999999999999999999999 777776655 2
Q ss_pred e--eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc
Q psy13856 107 F--KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 178 (271)
Q Consensus 107 ~--~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 178 (271)
+ .....+.++..++ +.+++ ........+..+.+|...+..+.|+| ++.++++++.|+.+++|+...++
T Consensus 188 h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~----~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 188 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP----DGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT----TSSEEEEEETTSCEEEEESSCCS
T ss_pred CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC----CCCeeeeeeccccceEEeecccc
Confidence 2 2333344466666 66666 32222356778899999999999999 69999999999999999998765
Q ss_pred e--eeeeeeccCCCCeEEEEEecCC-CEEEEE--ECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 179 T--WTPFIMNTFDDVVWNVSWSLTG-DILTVS--CGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 179 ~--~~~~~~~~h~~~v~~v~~~~~g-~~l~s~--s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
. ........|...|.+++|+|.+ .+++++ +.|++|++||+.++ .+...+..
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~---~~~~~~~~ 319 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---ACLSAVDA 319 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT---EEEEEEEC
T ss_pred ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc---ccceeecc
Confidence 2 1245667899999999999965 556554 46999999999877 44444443
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.3e-21 Score=165.89 Aligned_cols=161 Identities=9% Similarity=0.099 Sum_probs=123.6
Q ss_pred cceecccCCCCCCCEEEEccCCCeEEeccc---eeeecccccc-ccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 23 EIETYTESPLRIGHTLISCDTQAHIGIRST---ISLLQGSVYL-RRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~---~~~~~~h~~~-~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
+..+..+.+.|||+.||+++.||.|++||. +..+. |... ....+.+++|||||++|++|+.||+|++|+. ..
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~---~~ 160 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI---RK 160 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC---CC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC---CC
Confidence 445666777789999999999999999997 45555 5431 1123889999999999999999999999998 33
Q ss_pred CceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEe----cCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEc
Q psy13856 99 PACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKL----ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS 174 (271)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~ 174 (271)
+.... ..+..+..+ .+|.++|.+++|+| ++ +++++.|+.+++||+
T Consensus 161 ~~l~~-------------------------~~~i~l~ti~~~~~gh~~~V~sVawSP----dg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 161 NSENT-------------------------PEFYFESSIRLSDAGSKDWVTHIVWYE----DV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp CTTTC-------------------------CCCEEEEEEECSCTTCCCCEEEEEEET----TE--EEEEETTCCEEEECC
T ss_pred Ccccc-------------------------ccceeeeeeecccccccccEEEEEEcC----Cc--EEEEeCCCeEEEEEC
Confidence 22100 001133443 67889999999999 57 888999999999999
Q ss_pred CCCcee-eeeee-ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 175 NDYVTW-TPFIM-NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 175 ~~~~~~-~~~~~-~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
...... ....+ .+|...|.+++|+ |..||+++ |++|++|++..+
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTT
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCC
Confidence 876631 02345 4788999999999 68999997 699999998865
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.88 E-value=1.7e-20 Score=160.36 Aligned_cols=181 Identities=15% Similarity=0.202 Sum_probs=145.9
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-c
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-Y 106 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~ 106 (271)
++|++|++|+.||.|++||. +..+.+|... |.+++|+ ++.+++|+.|++|++||. .++++.... .
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~--~~~l~s~~~dg~i~vwd~---~~~~~~~~~~~ 197 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG----VWSSQMR--DNIIISGSTDRTLKVWNA---ETGECIHTLYG 197 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSC----EEEEEEE--TTEEEEEETTSCEEEEET---TTTEEEEEECC
T ss_pred EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC----EEEEEec--CCEEEEEeCCCeEEEEEC---CcCcEEEEECC
Confidence 47899999999999999998 6778899999 9999997 579999999999999998 666666554 2
Q ss_pred e--eeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCce
Q psy13856 107 F--KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT 179 (271)
Q Consensus 107 ~--~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 179 (271)
+ ........+..++ +.+++.+....+....+.+|...|.+++|+ +.++++|+.||.|++||.+++..
T Consensus 198 h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 198 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD------GRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC------SSCEEEEETTSCEEEEEGGGTEE
T ss_pred CCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC------CCEEEEEcCCCEEEEEECCCCcE
Confidence 2 2222223355555 788883222226778888999999999993 57899999999999999998776
Q ss_pred eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecccch
Q psy13856 180 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSE 235 (271)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 235 (271)
...+.+|...|.+++| ++.++++++.|+.|++||++++ +++..+.++..
T Consensus 272 --~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~ 320 (445)
T 2ovr_B 272 --LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG---NCIHTLTGHQS 320 (445)
T ss_dssp --EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC---CEEEEECCCCS
T ss_pred --eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC---CEEEEEcCCcc
Confidence 6778899999999999 7889999999999999999876 55566655543
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=1.9e-21 Score=185.42 Aligned_cols=183 Identities=13% Similarity=0.034 Sum_probs=152.3
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......|++.++++|+.||.|++|+. ...+.+|... |.+++|+|+++++++++.|+.|++|+. .++.+
T Consensus 965 ~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~----v~~l~~s~dg~~l~s~~~dg~i~vwd~---~~~~~ 1037 (1249)
T 3sfz_A 965 SCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA----VRHIQFTADGKTLISSSEDSVIQVWNW---QTGDY 1037 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC----CCCEEECSSSSCEEEECSSSBEEEEET---TTTEE
T ss_pred EEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc----eEEEEECCCCCEEEEEcCCCEEEEEEC---CCCce
Confidence 33444579999999999999999998 6677899999 999999999999999999999999998 66666
Q ss_pred eeccce----eeEEEeeccceee----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEE
Q psy13856 102 LQPKYF----KLTVYSTKLTRIL----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 173 (271)
Q Consensus 102 ~~~~~~----~~~~~~~~~~~l~----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd 173 (271)
.....+ ....+..++..++ +.+++++....+....+.+|...|.+++|+| ++.++++++.|+.|++||
T Consensus 1038 ~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~----d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1038 VFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS----DATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp ECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECS----SSSSCEEECCSSCCCEEC
T ss_pred EEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECC----CCCEEEEEcCCCcEEEEE
Confidence 544432 2333444444444 7888832222267788899999999999999 799999999999999999
Q ss_pred cCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 174 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 174 ~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
+.++.. ...+.+|...|++++|+|+|.+|++++.||.|++||+.++.
T Consensus 1114 ~~~~~~--~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1114 FDLLSP--LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp SSSSSC--SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred CCCcce--eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 998876 67788999999999999999999999999999999998763
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=2.2e-21 Score=163.60 Aligned_cols=173 Identities=9% Similarity=-0.001 Sum_probs=115.0
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcEEEEEeecCCCCceeecc-
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAAKHLGTVQSSSPACLQPK- 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~~~d~~~~~~~~~~~~~- 105 (271)
.|+++|||||.|++|+|||+ ...+..|... +.+++|+|++. +|++++.|++|++||. .+++.....
T Consensus 154 ~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~----v~~v~~~p~~~~~l~~~~~d~~v~~wd~---~t~~~~~~~~ 226 (393)
T 4gq1_A 154 LAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSP----GISVQFRPSNPNQLIVGERNGNIRIFDW---TLNLSAEENS 226 (393)
T ss_dssp EEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSC----EEEEEEETTEEEEEEEEETTSEEEEEET---TCCC------
T ss_pred CCCCEEEEEECCCeEEEEECCCCceeeeecCCCCC----cEEEEECCCCCceEEecCCCCEEEEEEC---CCCccccccc
Confidence 38899999999999999998 5566788888 99999999874 8999999999999998 333222110
Q ss_pred -----------------------------ceeeEEEe-eccceee-----eEEEEe--eCCceEEeEEecCCCcceEE--
Q psy13856 106 -----------------------------YFKLTVYS-TKLTRIL-----ILVRIC--GGDKWIEETKLENHSDWVRD-- 146 (271)
Q Consensus 106 -----------------------------~~~~~~~~-~~~~~l~-----~~v~i~--~~~~~~~~~~~~~h~~~v~~-- 146 (271)
......+. .+++.++ +.++++ ..+ .....+..|...+..
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~--~~~~~l~~~~~~~~~~~ 304 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN--NDYNEISDSTMKLGPKN 304 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------C
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC--CCCceEeeecCccccEE
Confidence 00111222 3455555 666662 122 223333333333332
Q ss_pred ----------------EEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC
Q psy13856 147 ----------------VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD 210 (271)
Q Consensus 147 ----------------v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D 210 (271)
..|+|.. ++.++++|+.||.|++||..++.. .....+|..+|++++|+|+|++||+++.|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 305 LLPNVQGISLFPSLLGACPHPRY--MDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp CSCSEEEECSSCCSSCCEECSSC--TTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred EccccccccccCcceeEEEccCC--CCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 2333321 456788899999999999998876 56677888999999999999999999977
Q ss_pred CcEEEEEeC
Q psy13856 211 NSVSLWKEN 219 (271)
Q Consensus 211 ~~v~iw~~~ 219 (271)
| +.+|.+.
T Consensus 381 G-v~lvrL~ 388 (393)
T 4gq1_A 381 S-VLLTRLM 388 (393)
T ss_dssp E-EEEEEEG
T ss_pred C-eEEEEEe
Confidence 6 6677654
No 118
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.87 E-value=8.3e-21 Score=156.23 Aligned_cols=187 Identities=5% Similarity=-0.098 Sum_probs=141.2
Q ss_pred ccceecccCCCCCCCEEEEccCCCeEEeccc--------eeeeccccccccccceEEEEcCCCC-eEEEEeCCCcEEEEE
Q psy13856 22 LEIETYTESPLRIGHTLISCDTQAHIGIRST--------ISLLQGSVYLRRESNKAGALSPKLN-RSATSSFHEAAKHLG 92 (271)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~--------~~~~~~h~~~~~~~i~~~~~s~~~~-~l~s~s~d~~i~~~d 92 (271)
++-.+......|++.+|++++.|+.|++|++ ...+.+|... |.+++|+|+++ +|++|+.|+.|++|+
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHP----LLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSC----EEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCc----eEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 3344555555679999999999999999998 3455688888 99999999999 999999999999999
Q ss_pred e-ecCCCCceeec--c--ceeeEEEeeccceee-----eEEEEeeCCc---------eEEeEEecCCCcceEEEEEccCC
Q psy13856 93 T-VQSSSPACLQP--K--YFKLTVYSTKLTRIL-----ILVRICGGDK---------WIEETKLENHSDWVRDVAWAPSW 153 (271)
Q Consensus 93 ~-~~~~~~~~~~~--~--~~~~~~~~~~~~~l~-----~~v~i~~~~~---------~~~~~~~~~h~~~v~~v~~~p~~ 153 (271)
. ..+.. ..+.. . ......+.. +..++ +.+++.+... .+.+..+. |...|.+++|+|.
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~- 161 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS- 161 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS-
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC-
Confidence 7 43221 11111 1 113334444 66666 7788822111 23444555 8899999999993
Q ss_pred CCCCcEEEEEeCCCeEEEEEcCC-CceeeeeeeccCCCCeEEEEEec-CCCEEEEEECCCcEEEEEeCCC
Q psy13856 154 GLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 154 ~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+ +++++.|+.|++||++. ...........|...+.+++|+| ++.++++++.||.|++|+++..
T Consensus 162 ---~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 162 ---R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp ---E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred ---c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 4 99999999999999998 55322445567888999999999 9999999999999999999865
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=4.7e-20 Score=157.66 Aligned_cols=171 Identities=14% Similarity=0.123 Sum_probs=137.2
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-ce
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-YF 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-~~ 107 (271)
++..+++|+.|+.|++||. +..+.+|... |.+++| ++.++++++.|+.|++||. .+++++... .+
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----v~~~~~--~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~~~ 318 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR----VYSLQF--DGIHVVSGSLDTSIRVWDV---ETGNCIHTLTGH 318 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC----EEEEEE--CSSEEEEEETTSCEEEEET---TTCCEEEEECCC
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCc----eEEEEE--CCCEEEEEeCCCeEEEEEC---CCCCEEEEEcCC
Confidence 7888999999999999998 6677888888 999999 7889999999999999998 666666544 22
Q ss_pred --eeEEEeeccceee-----eEEEEeeCCceEEeEEecC---CCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCC
Q psy13856 108 --KLTVYSTKLTRIL-----ILVRICGGDKWIEETKLEN---HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY 177 (271)
Q Consensus 108 --~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 177 (271)
.......+++.++ +.|++.+....+.+..+.+ |...|.+++|++ .++++|+.||.|++||+.++
T Consensus 319 ~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 319 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK------NFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp CSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS------SEEEEEETTSEEEEEETTTC
T ss_pred cccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC------CEEEEEeCCCeEEEEECCCC
Confidence 2233334566666 7788832222256777765 888999999965 69999999999999999998
Q ss_pred ceeeeeee-----ccCCCCeEEEEEecCCCEEEEEECCCc----EEEEEeCCC
Q psy13856 178 VTWTPFIM-----NTFDDVVWNVSWSLTGDILTVSCGDNS----VSLWKENTD 221 (271)
Q Consensus 178 ~~~~~~~~-----~~h~~~v~~v~~~~~g~~l~s~s~D~~----v~iw~~~~~ 221 (271)
+. ...+ .+|.+.|++++|+|++.++++|+.||+ |.+||++.+
T Consensus 393 ~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 393 EF--IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CE--EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ce--eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 76 4444 477889999999999999999999998 999999865
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=1.1e-19 Score=151.23 Aligned_cols=144 Identities=14% Similarity=0.098 Sum_probs=114.6
Q ss_pred CEEEE--ccCCCeEEeccc---------------------eeeeccccccccccceEEEEcCCCCeEEEEeCCCc-EEEE
Q psy13856 36 HTLIS--CDTQAHIGIRST---------------------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEA-AKHL 91 (271)
Q Consensus 36 ~~l~s--~s~d~~i~lwd~---------------------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~-i~~~ 91 (271)
.+++. |+.||.|++||+ +..+.+|... |.+++|+|++++|++|+.|++ |++|
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~----v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP----IKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC----EEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc----eEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 44444 789999999998 1457889999 999999999999999999998 9999
Q ss_pred EeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEec-C-CCcceEEEEEccCCCCCCcEEEEEeCCCeE
Q psy13856 92 GTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLE-N-HSDWVRDVAWAPSWGLSKCMIASCSQDRKV 169 (271)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i 169 (271)
|. .+ + +.+..+. + |...|.+++|+| ++.+|++++.|++|
T Consensus 224 d~---~~------------------------------~--~~~~~~~~g~h~~~v~~~~~s~----~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 224 KT---ED------------------------------G--VLVREFRRGLDRADVVDMKWST----DGSKLAVVSDKWTL 264 (355)
T ss_dssp ET---TT------------------------------C--CEEEEEECTTCCSCEEEEEECT----TSCEEEEEETTCEE
T ss_pred EC---CC------------------------------C--cEEEEEEcCCCCCcEEEEEECC----CCCEEEEEECCCEE
Confidence 98 22 2 4555565 5 999999999999 79999999999999
Q ss_pred EEEEcCCCceeeeeeec---------------------cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 170 IIWTSNDYVTWTPFIMN---------------------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 170 ~iwd~~~~~~~~~~~~~---------------------~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
++||++.........+. ........++|++++.+|++++.||.+++|++..++
T Consensus 265 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 265 HVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 99999765321111111 112234678999999999999999999999987543
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.83 E-value=2.5e-19 Score=148.44 Aligned_cols=153 Identities=15% Similarity=0.081 Sum_probs=117.8
Q ss_pred ceecccCCCCC---CCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy13856 24 IETYTESPLRI---GHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 24 ~~~~~~~~~~~---g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~ 93 (271)
-.+......|+ |.+|++|+.||.|++||+ ...+.+|... |.+++|+|++++|++++.|+.|++||.
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGP----VLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSC----EEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCC----EEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 34444555567 699999999999999998 2677889999 999999999999999999999999998
Q ss_pred ecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEE--ccCCCCCCcEEEEEeCCCeEEE
Q psy13856 94 VQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAW--APSWGLSKCMIASCSQDRKVII 171 (271)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~~~l~s~~~dg~i~i 171 (271)
.+ + ... .+.+|...|.+++| +| ++.+|++++.|+.|++
T Consensus 116 ---~~------------------------------~--~~~-~~~~~~~~v~~~~~~~~~----~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 116 ---SS------------------------------N--QAI-QIAQHDAPVKTIHWIKAP----NYSCVMTGSWDKTLKF 155 (368)
T ss_dssp ---TT------------------------------T--EEE-EEEECSSCEEEEEEEECS----SCEEEEEEETTSEEEE
T ss_pred ---CC------------------------------C--Cce-eeccccCceEEEEEEeCC----CCCEEEEccCCCcEEE
Confidence 22 2 222 24469999999999 77 6899999999999999
Q ss_pred EEcCCCceeeeeeeccC-----------------------------------------CCCeEEEEEecCCCE----EEE
Q psy13856 172 WTSNDYVTWTPFIMNTF-----------------------------------------DDVVWNVSWSLTGDI----LTV 206 (271)
Q Consensus 172 wd~~~~~~~~~~~~~~h-----------------------------------------~~~v~~v~~~~~g~~----l~s 206 (271)
||+++++. ...+..+ ...+.++++.+++.. +++
T Consensus 156 wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 156 WDTRSSNP--MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp ECSSCSSC--SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EECCCCcE--EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 99987654 2222221 234455555555443 888
Q ss_pred EECCCcEEEEEeCCCC
Q psy13856 207 SCGDNSVSLWKENTDG 222 (271)
Q Consensus 207 ~s~D~~v~iw~~~~~~ 222 (271)
++.|+.|++|+++...
T Consensus 234 ~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPN 249 (368)
T ss_dssp EETTSEEEEEESSCSC
T ss_pred ecCCCcEEEEecCCCC
Confidence 9999999999987653
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=1.8e-19 Score=153.68 Aligned_cols=153 Identities=18% Similarity=0.181 Sum_probs=117.4
Q ss_pred CCCCEEEEccCCCeEEeccc--eee------------------eccccccccccceEEEEcCCCCeEE----EEeCCCcE
Q psy13856 33 RIGHTLISCDTQAHIGIRST--ISL------------------LQGSVYLRRESNKAGALSPKLNRSA----TSSFHEAA 88 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~--~~~------------------~~~h~~~~~~~i~~~~~s~~~~~l~----s~s~d~~i 88 (271)
+++.++++++.|+ +++|+. +.. ...+... |.+++|+|++++|+ +|+.|+.|
T Consensus 46 ~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 46 NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP----IHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC----EEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc----ccEEEEcCCCCEEEEEEeccCCCceE
Confidence 4677888888877 888775 100 0112334 89999999999999 88899999
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
++||+.....+... ....+.....+.+|...|.+++|+|. ++.+|++++.||+
T Consensus 121 ~iwd~~~~~~~~~~------------------------~~~~~~~~~~~~~h~~~V~~v~~~p~---~~~~las~s~Dg~ 173 (434)
T 2oit_A 121 AFFDVRTFSNEAKQ------------------------QKRPFAYHKLLKDAGGMVIDMKWNPT---VPSMVAVCLADGS 173 (434)
T ss_dssp EEEEHHHHHCTTCS------------------------SCCCSEEEECCCSGGGSEEEEEECSS---CTTEEEEEETTSC
T ss_pred EEEEccccccCCcC------------------------CcceeeeeeccCCCCCceEEEEECCC---CCCEEEEEECCCe
Confidence 99998321000000 00111335566789999999999995 4899999999999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
|++||++++.. .....+|...|++++|+|+|.+|++|+.||+|++||.+
T Consensus 174 v~iwD~~~~~~--~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 174 IAVLQVTETVK--VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEEESSSEE--EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEEcCCCcc--eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999998754 44556788999999999999999999999999999987
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=5.3e-18 Score=144.66 Aligned_cols=150 Identities=15% Similarity=0.072 Sum_probs=116.6
Q ss_pred ecccCCCCCCCEEE----EccCCCeEEeccc--e--------------eeeccccccccccceEEEEcCC-CCeEEEEeC
Q psy13856 26 TYTESPLRIGHTLI----SCDTQAHIGIRST--I--------------SLLQGSVYLRRESNKAGALSPK-LNRSATSSF 84 (271)
Q Consensus 26 ~~~~~~~~~g~~l~----s~s~d~~i~lwd~--~--------------~~~~~h~~~~~~~i~~~~~s~~-~~~l~s~s~ 84 (271)
+......++|++|+ +|+.|+.|++||+ . ..+.+|... |.+++|+|+ +++|++++.
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~----V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGM----VIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGS----EEEEEECSSCTTEEEEEET
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCc----eEEEEECCCCCCEEEEEEC
Confidence 44555567999999 8999999999997 1 344568888 999999997 789999999
Q ss_pred CCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 85 HEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 85 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
|++|++||+. + + .......+|...|.+++|+| ++.+|++|+
T Consensus 171 Dg~v~iwD~~---~------------------------------~--~~~~~~~~~~~~v~~v~wsp----dg~~lasgs 211 (434)
T 2oit_A 171 DGSIAVLQVT---E------------------------------T--VKVCATLPSTVAVTSVCWSP----KGKQLAVGK 211 (434)
T ss_dssp TSCEEEEEES---S------------------------------S--EEEEEEECGGGCEEEEEECT----TSSCEEEEE
T ss_pred CCeEEEEEcC---C------------------------------C--cceeeccCCCCceeEEEEcC----CCCEEEEEc
Confidence 9999999982 2 2 23334456889999999999 699999999
Q ss_pred CCCeEEEEEcCCCceeeeeeecc-------CCCCeEEEEEecCCCEEEEE-ECCC------cEEEEEeCCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNT-------FDDVVWNVSWSLTGDILTVS-CGDN------SVSLWKENTD 221 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~-------h~~~v~~v~~~~~g~~l~s~-s~D~------~v~iw~~~~~ 221 (271)
.||.|++||.+ +.. ...+.. |...|.+++|++++.++++. +.|| .+++|++...
T Consensus 212 ~dg~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 212 QNGTVVQYLPT-LQE--KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEECTT-CCE--EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCcEEEEccC-Ccc--cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999999998 332 233322 33489999999998877553 3453 3899999754
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=1.2e-16 Score=133.92 Aligned_cols=188 Identities=11% Similarity=0.009 Sum_probs=136.0
Q ss_pred ccCCCCCCCEE-EEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeE-EEEeCCCcEEEEEeecCCCCc
Q psy13856 28 TESPLRIGHTL-ISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRS-ATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 28 ~~~~~~~g~~l-~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l-~s~s~d~~i~~~d~~~~~~~~ 100 (271)
.....|++++| ++++.|+.|++||. +..+..| .. +.+++|+|+++.+ ++++.|+.|++||. .+++
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~----~~~~~~s~dg~~l~~~~~~~~~v~~~d~---~~~~ 149 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KS----PLGLALSPDGKKLYVTNNGDKTVSVINT---VTKA 149 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SS----EEEEEECTTSSEEEEEETTTTEEEEEET---TTTE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CC----cceEEECCCCCEEEEEeCCCCEEEEEEC---CCCc
Confidence 33445788866 56667899999998 3444443 34 7899999999977 68888999999998 6666
Q ss_pred eeeccc----eeeEEEeeccceee------eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe---CCC
Q psy13856 101 CLQPKY----FKLTVYSTKLTRIL------ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS---QDR 167 (271)
Q Consensus 101 ~~~~~~----~~~~~~~~~~~~l~------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~---~dg 167 (271)
...... .....++.+++.++ +.+++.+....+....+. +...+.+++|+| ++.++++++ .++
T Consensus 150 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~----~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 150 VINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNP----EGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECT----TSSEEEEEEECSSCC
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECC----CCCEEEEEecCcCCC
Confidence 655442 13344566676653 677772222214555554 567889999999 688888877 689
Q ss_pred eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEE-EEEECCCcEEEEEeCCCCceeEEEEecccc
Q psy13856 168 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
.|++||+++++. ...+..|. .+.+++|+|++++| ++++.|+.|++||+.++ +.+..+..+.
T Consensus 225 ~v~~~d~~~~~~--~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~---~~~~~~~~~~ 286 (391)
T 1l0q_A 225 TVSMIDTGTNKI--TARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN---TITATMAVGK 286 (391)
T ss_dssp EEEEEETTTTEE--EEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEECSS
T ss_pred cEEEEECCCCeE--EEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC---cEEEEEECCc
Confidence 999999998765 45555554 57899999999877 56678999999999876 5566655443
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=9.9e-17 Score=134.41 Aligned_cols=186 Identities=11% Similarity=0.021 Sum_probs=136.1
Q ss_pred cccCCCCCCCEE-EEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEE-EEeCCCcEEEEEeecCCCC
Q psy13856 27 YTESPLRIGHTL-ISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 27 ~~~~~~~~g~~l-~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~~~~~~~ 99 (271)
......|+|..+ ++++.|+.|++||. +..+..+. . +.+++|+|++++|+ +++.++.|++||. .++
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~----v~~~~~spdg~~l~~~~~~~~~v~v~d~---~~~ 106 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-S----PQGVAVSPDGKQVYVTNMASSTLSVIDT---TSN 106 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-S----EEEEEECTTSSEEEEEETTTTEEEEEET---TTT
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-C----ccceEECCCCCEEEEEECCCCEEEEEEC---CCC
Confidence 334455789865 78889999999998 44444444 5 89999999999775 4556799999998 666
Q ss_pred ceeeccc----eeeEEEeeccceee------eEEEEe--eCCceEEeEEecCCCcceEEEEEccCCCCCCcEE-EEEeCC
Q psy13856 100 ACLQPKY----FKLTVYSTKLTRIL------ILVRIC--GGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-ASCSQD 166 (271)
Q Consensus 100 ~~~~~~~----~~~~~~~~~~~~l~------~~v~i~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~~~d 166 (271)
+...... .....++.+++.++ +.+++. ..+ +....+..| ..+.+++|+| ++.++ ++++.|
T Consensus 107 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~-~~~~~~~~~~----dg~~l~~~~~~~ 179 (391)
T 1l0q_A 107 TVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK--AVINTVSVG-RSPKGIAVTP----DGTKVYVANFDS 179 (391)
T ss_dssp EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEECC-SSEEEEEECT----TSSEEEEEETTT
T ss_pred eEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--cEEEEEecC-CCcceEEECC----CCCEEEEEeCCC
Confidence 6655442 23445666677663 777772 344 566666655 4569999999 57666 678889
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE---CCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC---GDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s---~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
+.|++||++++.. ...+ .+...+.+++|+|++.+|++++ .|+.|++||+.++ +.+..+..+
T Consensus 180 ~~v~~~d~~~~~~--~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~ 243 (391)
T 1l0q_A 180 MSISVIDTVTNSV--IDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN---KITARIPVG 243 (391)
T ss_dssp TEEEEEETTTTEE--EEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT---EEEEEEECC
T ss_pred CEEEEEECCCCeE--EEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC---eEEEEEecC
Confidence 9999999998764 3333 3566889999999999999888 6899999999876 445555443
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.77 E-value=1e-16 Score=136.04 Aligned_cols=187 Identities=11% Similarity=-0.009 Sum_probs=136.4
Q ss_pred cccCCCCCCCEEEEccCCC---eEEeccc----eeeeccccccccccceEEEEcCCCCeEE-EEeCCCc--EEEEEeecC
Q psy13856 27 YTESPLRIGHTLISCDTQA---HIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSA-TSSFHEA--AKHLGTVQS 96 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~---~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~-s~s~d~~--i~~~d~~~~ 96 (271)
......|||+.|++++.|+ .|++||+ ...+..|... +.+++|+|||+.|+ +++.|+. |++||.
T Consensus 182 ~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~----~~~~~~spdg~~la~~~~~~g~~~i~~~d~--- 254 (415)
T 2hqs_A 182 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH----NGAPAFSPDGSKLAFALSKTGSLNLYVMDL--- 254 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC----EEEEEECTTSSEEEEEECTTSSCEEEEEET---
T ss_pred eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc----ccCEEEcCCCCEEEEEEecCCCceEEEEEC---
Confidence 4445567999999999875 9999998 4556677777 89999999999887 6666665 888898
Q ss_pred CCCceeeccc----eeeEEEeeccceee------e--EEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEE
Q psy13856 97 SSPACLQPKY----FKLTVYSTKLTRIL------I--LVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 163 (271)
Q Consensus 97 ~~~~~~~~~~----~~~~~~~~~~~~l~------~--~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 163 (271)
.+++...... .....++++++.++ + .+.+ ...+ .....+..|...+.+++|+| ++++|+.+
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~sp----dG~~l~~~ 328 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQRITWEGSQNQDADVSS----DGKFMVMV 328 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCEECCCSSSEEEEEEECT----TSSEEEEE
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC--CCEEEEecCCCcccCeEECC----CCCEEEEE
Confidence 5555543332 24456777888776 1 4555 2222 12344556778899999999 79999888
Q ss_pred eCC---CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC---cEEEEEeCCCCceeEEEEecccc
Q psy13856 164 SQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN---SVSLWKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 164 ~~d---g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~---~v~iw~~~~~~~~~~~~~~~~~~ 234 (271)
+.+ ..|++||+.+++. ..+..+. .+.+++|+|+|++|++++.|+ .|++||+..+ ....+..+.
T Consensus 329 ~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----~~~~l~~~~ 397 (415)
T 2hqs_A 329 SSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----FKARLPATD 397 (415)
T ss_dssp EECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC----CEEECCCSS
T ss_pred ECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC----cEEEeeCCC
Confidence 764 6899999998773 3455554 899999999999999988876 7999998632 334455443
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.76 E-value=5.3e-18 Score=137.70 Aligned_cols=131 Identities=11% Similarity=-0.037 Sum_probs=92.1
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeE------------EEEeCCCcEEEEEeecC
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRS------------ATSSFHEAAKHLGTVQS 96 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l------------~s~s~d~~i~~~d~~~~ 96 (271)
++.+|++|+.|++|+|||+ ++++.+|... ...+.+++|+|+|.++ ++|+.|+++++||.
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~-v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~--- 267 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY-QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP--- 267 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEEEC------------CCEEEEEEET---
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc-eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC---
Confidence 6789999999999999999 6777765432 1237788999999876 67889999999998
Q ss_pred CCCceeeccc------eeeEEE--eeccceee-----eEEEE--eeCCceEEeEEecCCCcceE-EEEEccCCCCCCcEE
Q psy13856 97 SSPACLQPKY------FKLTVY--STKLTRIL-----ILVRI--CGGDKWIEETKLENHSDWVR-DVAWAPSWGLSKCMI 160 (271)
Q Consensus 97 ~~~~~~~~~~------~~~~~~--~~~~~~l~-----~~v~i--~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~~~~l 160 (271)
.+++++.... +..... ...+..++ ++|+| ...+ +++.++.+|...+. +++|+| |+.+|
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tG--k~l~tL~gH~~~vvs~vafSP----DG~~L 341 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLG--QCTALLPPVSDQHWSFVKWSG----TDSHL 341 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTC--SEEEEECCC--CCCCEEEECS----SSSEE
T ss_pred CCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCC--cEEEEecCCCCCeEEEEEECC----CCCEE
Confidence 6776654321 110011 11133444 78999 3444 78889999987665 689999 79999
Q ss_pred EEEeCCCeEEEEEc
Q psy13856 161 ASCSQDRKVIIWTS 174 (271)
Q Consensus 161 ~s~~~dg~i~iwd~ 174 (271)
++|+.|++|++||+
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 99999999999996
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.76 E-value=2.8e-16 Score=133.45 Aligned_cols=182 Identities=10% Similarity=-0.005 Sum_probs=135.8
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEE-EEeCCCcEEEEEeecCCCCceeec
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
..+++.++++++.|+.|++||. +..+..|... +.+++|+|+++.++ +++.|+.|++||. .+++....
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~i~~~d~---~~~~~~~~ 249 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW----SKILLYDPIRDLVYCSNWISEDISVIDR---KTKLEIRK 249 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS----EEEEEEETTTTEEEEEETTTTEEEEEET---TTTEEEEE
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC----eeEEEEcCCCCEEEEEecCCCcEEEEEC---CCCcEEEE
Confidence 3568999999999999999998 5666778888 99999999999875 5558999999998 66666554
Q ss_pred cce----eeEEEeeccceee--e-----------EEEE-e-eCCceEEeEEecCCCcceEEEEEccCCCCCCc-EEEEEe
Q psy13856 105 KYF----KLTVYSTKLTRIL--I-----------LVRI-C-GGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCS 164 (271)
Q Consensus 105 ~~~----~~~~~~~~~~~l~--~-----------~v~i-~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~l~s~~ 164 (271)
... ....++.+++.++ . .|++ . ..+ +....+ .|...+.+++|+| ++. ++++++
T Consensus 250 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~~~-~~~~~~~~~~~~~----~g~~l~~~~~ 322 (433)
T 3bws_A 250 TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--KLIDTI-GPPGNKRHIVSGN----TENKIYVSDM 322 (433)
T ss_dssp CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEEEE-EEEECEEEEEECS----STTEEEEEET
T ss_pred ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--cEEeec-cCCCCcceEEECC----CCCEEEEEec
Confidence 422 3334555566655 2 5556 2 333 343333 4667889999999 464 667778
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEEC---------------CCcEEEEEeCCCCceeEEEE
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG---------------DNSVSLWKENTDGAWQCITE 229 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~---------------D~~v~iw~~~~~~~~~~~~~ 229 (271)
.|+.|++||..+++. ...+ .+...+.+++|+|+|+++++++. ||.|++||+.++ +.+..
T Consensus 323 ~~~~v~v~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~~~ 396 (433)
T 3bws_A 323 CCSKIEVYDLKEKKV--QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVKEF 396 (433)
T ss_dssp TTTEEEEEETTTTEE--EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEEEE
T ss_pred CCCEEEEEECCCCcE--EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEEEE
Confidence 999999999998764 3333 36778999999999999988887 579999999876 55555
Q ss_pred ecc
Q psy13856 230 MGK 232 (271)
Q Consensus 230 ~~~ 232 (271)
+..
T Consensus 397 ~~~ 399 (433)
T 3bws_A 397 WEA 399 (433)
T ss_dssp EEC
T ss_pred ecC
Confidence 544
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.76 E-value=1.8e-16 Score=134.66 Aligned_cols=176 Identities=6% Similarity=-0.024 Sum_probs=133.7
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc-----ee-----eeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST-----IS-----LLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~-----~~-----~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
....|++.++++++.|+.|++||. .. .+.+|... |.+++|+|+++.+++++.|+.|++||. .+
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~s~~~d~~v~~~d~---~~ 200 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGF----VETISIPEHNELWVSQMQANAVHVFDL---KT 200 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCE----EEEEEEGGGTEEEEEEGGGTEEEEEET---TT
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCc----eeEEEEcCCCEEEEEECCCCEEEEEEC---CC
Confidence 333458889999999999999998 22 34577778 999999999999999999999999998 66
Q ss_pred Cceeecc-----ceeeEEEeeccceee------eEEEEe--eCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe-
Q psy13856 99 PACLQPK-----YFKLTVYSTKLTRIL------ILVRIC--GGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS- 164 (271)
Q Consensus 99 ~~~~~~~-----~~~~~~~~~~~~~l~------~~v~i~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~- 164 (271)
++..... ......++.+++.++ +.|++. ..+ +....+..+ ..+.+++|+| ++.++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~-~~~~~~~~~~----~g~~l~~~~~ 273 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK--LEIRKTDKI-GLPRGLLLSK----DGKELYIAQF 273 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT--EEEEECCCC-SEEEEEEECT----TSSEEEEEEE
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC--cEEEEecCC-CCceEEEEcC----CCCEEEEEEC
Confidence 5555443 123445566666653 677772 344 556666644 5689999999 688888887
Q ss_pred -------CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEE-EEEECCCcEEEEEeCCC
Q psy13856 165 -------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTD 221 (271)
Q Consensus 165 -------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~D~~v~iw~~~~~ 221 (271)
.|+.|++||+++++. .....|...+.+++|+|+++.+ ++++.|+.|++||++++
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKL---IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEE---EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCccccCCCeEEEEECCCCcE---EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 589999999998764 2233556688999999999755 56688999999999865
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=6.4e-16 Score=131.07 Aligned_cols=171 Identities=12% Similarity=0.035 Sum_probs=130.8
Q ss_pred CCEEEEccCC------CeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCC---cEEEEEeecCCCCce
Q psy13856 35 GHTLISCDTQ------AHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHE---AAKHLGTVQSSSPAC 101 (271)
Q Consensus 35 g~~l~s~s~d------~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~---~i~~~d~~~~~~~~~ 101 (271)
+..++.++.+ +.|++||. ...+.+|... +.+++|+|+|++|++++.++ .|++||+ .++++
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~----v~~~~~Spdg~~la~~s~~~~~~~i~~~d~---~tg~~ 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQP----LMSPAWSPDGSKLAYVTFESGRSALVIQTL---ANGAV 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSC----EEEEEECTTSSEEEEEECTTSSCEEEEEET---TTCCE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCc----ceeeEEcCCCCEEEEEEecCCCcEEEEEEC---CCCcE
Confidence 6667766654 79999998 6677788888 99999999999999999885 9999998 56655
Q ss_pred eeccc----eeeEEEeeccceee--------eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC-CC
Q psy13856 102 LQPKY----FKLTVYSTKLTRIL--------ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DR 167 (271)
Q Consensus 102 ~~~~~----~~~~~~~~~~~~l~--------~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~-dg 167 (271)
..... .....++++++.++ ..|.+ .... .....+..|...+.+++|+| |+.+|+.++. ++
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~sp----dg~~l~~~s~~~g 289 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--GQIRQVTDGRSNNTEPTWFP----DSQNLAFTSDQAG 289 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--CCEEECCCCSSCEEEEEECT----TSSEEEEEECTTS
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC--CCEEeCcCCCCcccceEECC----CCCEEEEEECCCC
Confidence 54332 24566777888766 23555 2222 23356777888999999999 7898888876 44
Q ss_pred --eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC---CcEEEEEeCCC
Q psy13856 168 --KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD---NSVSLWKENTD 221 (271)
Q Consensus 168 --~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D---~~v~iw~~~~~ 221 (271)
.|.+||..++. ...+..+...+.+++|+|+|++|++++.+ ..|++||+.++
T Consensus 290 ~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 290 RPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp SCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 67888988765 34455567789999999999999988764 58999999865
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=1.9e-14 Score=115.10 Aligned_cols=192 Identities=14% Similarity=-0.015 Sum_probs=130.2
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc-e-----eeeccc-cccccccceEEEEcCCCCeEEEEe--CCCcEEEEEeecC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST-I-----SLLQGS-VYLRRESNKAGALSPKLNRSATSS--FHEAAKHLGTVQS 96 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~-~-----~~~~~h-~~~~~~~i~~~~~s~~~~~l~s~s--~d~~i~~~d~~~~ 96 (271)
+......|||++|++++ ++.|.+||+ - .....| ... +.+++|+|++++|++++ .++..++|....
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~- 117 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATIC----NNDHGISPDGALYAISDKVEFGKSAIYLLPS- 117 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCB----CSCCEECTTSSEEEEEECTTTSSCEEEEEET-
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccc----ccceEECCCCCEEEEEEeCCCCcceEEEEEC-
Confidence 34444567999999987 689999998 2 222333 244 78999999999999998 445666666521
Q ss_pred CCCceeecc---ceeeEEEeeccceee------eEEEE---eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 97 SSPACLQPK---YFKLTVYSTKLTRIL------ILVRI---CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 97 ~~~~~~~~~---~~~~~~~~~~~~~l~------~~v~i---~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
..+...... ......++.+++.++ +.+++ .... .....+..|...+.+++|+| ++.+++.++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~s~----dg~~l~~~~ 191 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTHGEGRNDGPDYSP----DGRWIYFNS 191 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT--CCEEECCCSSSCEEEEEECT----TSSEEEEEE
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCC--CcceEcccCCCccccceECC----CCCEEEEEe
Confidence 222222211 223345667777665 44455 2222 23456667888999999999 688777665
Q ss_pred -CCCeEEEEEcC-CCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----------CcEEEEEeCCCCceeEEEEec
Q psy13856 165 -QDRKVIIWTSN-DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----------NSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 165 -~dg~i~iwd~~-~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----------~~v~iw~~~~~~~~~~~~~~~ 231 (271)
.++.+++|++. .... ...+..|...+.+++|+|+|++|++++.+ +.|++||+.++ ....+..+.
T Consensus 192 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~~~~~~ 268 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSS--VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG-NVETLFDLF 268 (297)
T ss_dssp CTTSSCEEEEEETTSSC--EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC-SCEEEEEEE
T ss_pred cCCCCccEEEECCCCCC--cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC-CceeeeccC
Confidence 58999999986 3333 55667788889999999999999888876 56999998754 444444443
Q ss_pred c
Q psy13856 232 K 232 (271)
Q Consensus 232 ~ 232 (271)
+
T Consensus 269 ~ 269 (297)
T 2ojh_A 269 G 269 (297)
T ss_dssp E
T ss_pred C
Confidence 3
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.65 E-value=2.6e-14 Score=125.16 Aligned_cols=188 Identities=9% Similarity=0.043 Sum_probs=136.0
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
..|++.++++++.|++|.+||. +..+..+. . +..++|+|||++|++++.|++|++||.. ..+++++...
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~----~~~v~~spdg~~l~v~~~d~~V~v~D~~-~~t~~~~~~i 218 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-A----VHISRMSASGRYLLVIGRDARIDMIDLW-AKEPTKVAEI 218 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-T----EEEEEECTTSCEEEEEETTSEEEEEETT-SSSCEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-c----cceEEECCCCCEEEEECCCCeEEEEECc-CCCCcEEEEE
Confidence 3468889999999999999998 44444222 2 5789999999999999999999999982 1234454443
Q ss_pred c---e-eeEEEee----ccceee------eEEEEeeCCceEEeEEecC----------CC-cceEEEEEccCCCCCCcEE
Q psy13856 106 Y---F-KLTVYST----KLTRIL------ILVRICGGDKWIEETKLEN----------HS-DWVRDVAWAPSWGLSKCMI 160 (271)
Q Consensus 106 ~---~-~~~~~~~----~~~~l~------~~v~i~~~~~~~~~~~~~~----------h~-~~v~~v~~~p~~~~~~~~l 160 (271)
. . ....++. ++++++ +.|.+.+....+++..+.. |. ..+.++.++|. ++.++
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~---~~~~~ 295 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE---HPEFI 295 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS---SSEEE
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC---CCEEE
Confidence 2 1 3445666 777766 6677733333356666543 22 37889999995 56778
Q ss_pred EEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEEEEec
Q psy13856 161 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 161 ~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
++...++.|.+||..+.+......+ .+...+..+.|+|+|++|++++ .+++|.+||..++ +.+..+.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg---~l~~~i~ 363 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR---RLSALVD 363 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT---EEEEEEE
T ss_pred EEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC---eEEEeec
Confidence 8888899999999988664322233 3566788999999999877655 5899999999877 5555554
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.65 E-value=6.8e-15 Score=132.96 Aligned_cols=185 Identities=9% Similarity=0.026 Sum_probs=128.7
Q ss_pred ceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCC---------CcEE
Q psy13856 24 IETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH---------EAAK 89 (271)
Q Consensus 24 ~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d---------~~i~ 89 (271)
...+.....|||+++++ +.||+|++||. ...+..|... ...|.+++|||||++|++++.+ +.++
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIE-SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTT-TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecccccc-ccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34566667789997766 78899999998 3445555430 0127899999999999999875 6788
Q ss_pred EEEeecCCCCceeecc---c----eeeEEEeeccceee----eEEEE--eeCCceEEeEEecCCCcc-------------
Q psy13856 90 HLGTVQSSSPACLQPK---Y----FKLTVYSTKLTRIL----ILVRI--CGGDKWIEETKLENHSDW------------- 143 (271)
Q Consensus 90 ~~d~~~~~~~~~~~~~---~----~~~~~~~~~~~~l~----~~v~i--~~~~~~~~~~~~~~h~~~------------- 143 (271)
+||. .+++..... . .....++++++.++ +.+.+ ...+ +..+....+...
T Consensus 95 ~~d~---~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g--~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 95 LSKI---PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGK--QAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp EEES---SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSS--CCEEEECCCBTTTEEEEECCHHHHH
T ss_pred EEEC---CCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCC--ceEEEecCCCCCceECcccceeEEE
Confidence 9998 444442221 1 23456788888888 56777 3333 233333333332
Q ss_pred -----eEEEEEccCCCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCceeeeee
Q psy13856 144 -----VRDVAWAPSWGLSKCMIASCSQDR----------------------------------KVIIWTSNDYVTWTPFI 184 (271)
Q Consensus 144 -----v~~v~~~p~~~~~~~~l~s~~~dg----------------------------------~i~iwd~~~~~~~~~~~ 184 (271)
+.+++|+| |+++|+.++.|+ .|++||+.++.. ...
T Consensus 170 e~~~~~~~~~~Sp----Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~--~~~ 243 (723)
T 1xfd_A 170 EILKTHIAHWWSP----DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH--DLE 243 (723)
T ss_dssp TTSSSSEEEEECT----TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC--CEE
T ss_pred EeccCcceEEECC----CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce--eEE
Confidence 37899999 799999887653 799999988763 233
Q ss_pred ecc------CCCCeEEEEEecCCCEEEEEEC----CCcEEEEEeCCC
Q psy13856 185 MNT------FDDVVWNVSWSLTGDILTVSCG----DNSVSLWKENTD 221 (271)
Q Consensus 185 ~~~------h~~~v~~v~~~~~g~~l~s~s~----D~~v~iw~~~~~ 221 (271)
+.. +...+.+++|+|||+++++.+. +..|++||+.++
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 433 3567899999999998877653 357999998865
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.62 E-value=1.4e-12 Score=106.66 Aligned_cols=193 Identities=6% Similarity=-0.069 Sum_probs=121.6
Q ss_pred CCCCCCEEEEccCC-CeEEeccc---------eeeeccccccccccceEEEEcCCCCeEEEEeC-CCcEEEEEeecCCCC
Q psy13856 31 PLRIGHTLISCDTQ-AHIGIRST---------ISLLQGSVYLRRESNKAGALSPKLNRSATSSF-HEAAKHLGTVQSSSP 99 (271)
Q Consensus 31 ~~~~g~~l~s~s~d-~~i~lwd~---------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~-d~~i~~~d~~~~~~~ 99 (271)
..|+|++|++++.+ +.|++|++ +..+..+. . +..++|+|+++++++++. ++.|++|+..++...
T Consensus 45 ~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 119 (343)
T 1ri6_A 45 VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S----LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV 119 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C----CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE
T ss_pred ECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C----CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc
Confidence 34799988888776 99999987 12222222 4 789999999998876664 888999998321122
Q ss_pred ceeecc----ceeeEEEeeccceee------eEEEE--eeC-CceEEeE--EecC-CCcceEEEEEccCCCCCCcEEE-E
Q psy13856 100 ACLQPK----YFKLTVYSTKLTRIL------ILVRI--CGG-DKWIEET--KLEN-HSDWVRDVAWAPSWGLSKCMIA-S 162 (271)
Q Consensus 100 ~~~~~~----~~~~~~~~~~~~~l~------~~v~i--~~~-~~~~~~~--~~~~-h~~~v~~v~~~p~~~~~~~~l~-s 162 (271)
...... ......++.+++.++ +.+.+ ... +...... .+.. ....+..++|+| ++.+++ +
T Consensus 120 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----dg~~l~~~ 195 (343)
T 1ri6_A 120 GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP----NEQYAYCV 195 (343)
T ss_dssp EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT----TSSEEEEE
T ss_pred cccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC----CCCEEEEE
Confidence 222222 113344666666554 55666 233 4333322 2332 345788999999 677665 4
Q ss_pred EeCCCeEEEEEcCC--Cceeeeeeec----cC--CCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCC-CCceeEEEEecc
Q psy13856 163 CSQDRKVIIWTSND--YVTWTPFIMN----TF--DDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT-DGAWQCITEMGK 232 (271)
Q Consensus 163 ~~~dg~i~iwd~~~--~~~~~~~~~~----~h--~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~-~~~~~~~~~~~~ 232 (271)
+..++.+.+|++.. +......... ++ ...+..++|+|+|++|+++. .|+.|.+|++.. .+..+.+..+..
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred eCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 55899999999954 3221111111 11 23567899999998887554 689999999984 334566655544
No 135
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.62 E-value=1.9e-14 Score=127.05 Aligned_cols=182 Identities=7% Similarity=-0.099 Sum_probs=128.2
Q ss_pred cceecccCCCCCCCEEEEccC-CCeEEeccc----eeeecccc-ccccccceEEEEcCCCCeEEEEeC---CCcEEEEEe
Q psy13856 23 EIETYTESPLRIGHTLISCDT-QAHIGIRST----ISLLQGSV-YLRRESNKAGALSPKLNRSATSSF---HEAAKHLGT 93 (271)
Q Consensus 23 ~~~~~~~~~~~~g~~l~s~s~-d~~i~lwd~----~~~~~~h~-~~~~~~i~~~~~s~~~~~l~s~s~---d~~i~~~d~ 93 (271)
...++.....|||+.||+++. ||+++||++ ...+..|. .. +..++|+|| +.+++++. +...++|..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~----~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINS----VLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSE----ECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccc----cccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 445677777789999999887 999999998 34444454 56 889999999 77777765 556677766
Q ss_pred ecCCCCceeecc---ceeeEEEeeccceee------eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEE
Q psy13856 94 VQSSSPACLQPK---YFKLTVYSTKLTRIL------ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 162 (271)
Q Consensus 94 ~~~~~~~~~~~~---~~~~~~~~~~~~~l~------~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 162 (271)
.....+...... ......++.+++.++ +.+.+ ..++ +...... +.. .+++|+| ||++|++
T Consensus 96 ~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g--~~~~l~~-~~~--~~~~~sp----DG~~la~ 166 (582)
T 3o4h_A 96 NTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG--GLRELAR-LPG--FGFVSDI----RGDLIAG 166 (582)
T ss_dssp ETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT--EEEEEEE-ESS--CEEEEEE----ETTEEEE
T ss_pred eccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC--cEEEeec-CCC--ceEEECC----CCCEEEE
Confidence 420122222221 223445666665433 22234 3444 2222222 323 7899999 7999998
Q ss_pred EeCC----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC--cEEEEEeCCC
Q psy13856 163 CSQD----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN--SVSLWKENTD 221 (271)
Q Consensus 163 ~~~d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~--~v~iw~~~~~ 221 (271)
++.| +.|++||+.+++ ...+..|...+..++|+|||+.|+++..++ .|++||++++
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~---~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGG---LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp EEEEETTEEEEEEEETTTCC---CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred EEEcCCCCeEEEEEcCCCCC---ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 8877 789999998877 446678888899999999999999888888 8999998865
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.61 E-value=1.4e-13 Score=120.51 Aligned_cols=194 Identities=13% Similarity=0.126 Sum_probs=132.5
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEcC----CCCeEEEEe-CCCcEEEEEee
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALSP----KLNRSATSS-FHEAAKHLGTV 94 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~----~~~~l~s~s-~d~~i~~~d~~ 94 (271)
+.....|||++|++++.|+.|++||+ +..+. +... +..++|+| +|+++++++ .+++|.+||.
T Consensus 182 ~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~----p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~- 255 (543)
T 1nir_A 182 HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIE----ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG- 255 (543)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSE----EEEEEECCSTTCTTTEEEEEEEESSEEEEEET-
T ss_pred ceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCC----cceEEeCCCcCCCCCEEEEEEccCCeEEEEec-
Confidence 33445679999999999999999998 33444 3334 78999999 999998887 5899999998
Q ss_pred cCCCCceeeccce----------------eeEEEeeccceee------eEEEE-e-eCCceEEeEEecCCCcceEEEEEc
Q psy13856 95 QSSSPACLQPKYF----------------KLTVYSTKLTRIL------ILVRI-C-GGDKWIEETKLENHSDWVRDVAWA 150 (271)
Q Consensus 95 ~~~~~~~~~~~~~----------------~~~~~~~~~~~l~------~~v~i-~-~~~~~~~~~~~~~h~~~v~~v~~~ 150 (271)
.++++++.... ....++.++..+. +.|.+ . .+.....+..+ .+...+.++.|+
T Consensus 256 --~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~s 332 (543)
T 1nir_A 256 --ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWD 332 (543)
T ss_dssp --TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEEC
T ss_pred --cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceEC
Confidence 67766655421 1223344344433 56666 2 22211112233 356678899999
Q ss_pred cCCCCCCcEEEEE-eCCCeEEEEEcCCCceeeeeeec----cCCCCeEEEEEecC-CCEEEEEE-CCCcEEEEEeCCCCc
Q psy13856 151 PSWGLSKCMIASC-SQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLT-GDILTVSC-GDNSVSLWKENTDGA 223 (271)
Q Consensus 151 p~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~----~h~~~v~~v~~~~~-g~~l~s~s-~D~~v~iw~~~~~~~ 223 (271)
| ++++++++ ..+++|.+||..+++. ...+. .|.+....+ ++|+ +.+++++. .|++|.+|+..+.+.
T Consensus 333 p----dg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 333 S----SHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp T----TSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred C----CCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 9 68876654 4689999999999875 44443 265544443 4777 66677775 589999999987433
Q ss_pred ----eeEEEEecccchh
Q psy13856 224 ----WQCITEMGKTSEQ 236 (271)
Q Consensus 224 ----~~~~~~~~~~~~~ 236 (271)
|+++.++..+...
T Consensus 406 ~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGG 422 (543)
T ss_dssp TTTBTSEEEEEECSCSC
T ss_pred chhcCeEEEEEEcCCCC
Confidence 8999999876543
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.60 E-value=7.4e-13 Score=109.14 Aligned_cols=192 Identities=11% Similarity=0.057 Sum_probs=123.4
Q ss_pred CCCCCEEEEccC---CCeEEeccc-------eeeeccccccccccceEEEEcCCCCeEEEEe-CCCcEEEEEeecCCCCc
Q psy13856 32 LRIGHTLISCDT---QAHIGIRST-------ISLLQGSVYLRRESNKAGALSPKLNRSATSS-FHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 32 ~~~g~~l~s~s~---d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~~~d~~~~~~~~ 100 (271)
.|||+ |++++. ++.|.+|++ +..+..+... +..++|+|++++|++++ .++.+++|+........
T Consensus 48 spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~----p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 48 SAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP----PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp CTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC----CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEE
T ss_pred ccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC----CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCee
Confidence 46888 444443 689999998 2233345556 88999999999888887 78999999983111222
Q ss_pred eeeccc--------------eeeEEEeeccceee-----eEEEE--ee-CCceEEeEEecCC-CcceEEEEEccCCCCCC
Q psy13856 101 CLQPKY--------------FKLTVYSTKLTRIL-----ILVRI--CG-GDKWIEETKLENH-SDWVRDVAWAPSWGLSK 157 (271)
Q Consensus 101 ~~~~~~--------------~~~~~~~~~~~~l~-----~~v~i--~~-~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~ 157 (271)
.+.... .....++.+++.++ +.+.+ .. .+.......+..+ ......++|+| |+
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp----dg 198 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP----DG 198 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT----TS
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC----CC
Confidence 222111 11255666777444 56666 22 3433333333333 33677899999 68
Q ss_pred cEEEE-EeCCCeEEEEEcCC--CceeeeeeeccCC------CCeEEEEEecCCCEE-EEEECCCcEEEEEeCCCCceeEE
Q psy13856 158 CMIAS-CSQDRKVIIWTSND--YVTWTPFIMNTFD------DVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTDGAWQCI 227 (271)
Q Consensus 158 ~~l~s-~~~dg~i~iwd~~~--~~~~~~~~~~~h~------~~v~~v~~~~~g~~l-~s~s~D~~v~iw~~~~~~~~~~~ 227 (271)
++++. +..++.+.+|++.. +.......+.... ..+..++|+|+|++| ++...++.|.+|+++..+.+..+
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~ 278 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLI 278 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 85544 56789999999875 3321122222222 358899999999987 45566899999999865566666
Q ss_pred EEecc
Q psy13856 228 TEMGK 232 (271)
Q Consensus 228 ~~~~~ 232 (271)
..+..
T Consensus 279 ~~~~~ 283 (347)
T 3hfq_A 279 QQIST 283 (347)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66654
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=2.6e-13 Score=108.50 Aligned_cols=164 Identities=11% Similarity=0.004 Sum_probs=117.7
Q ss_pred EccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC-Cceeecc------cee
Q psy13856 40 SCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS-PACLQPK------YFK 108 (271)
Q Consensus 40 s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~-~~~~~~~------~~~ 108 (271)
+++.|+.|++||. ...+..|... +.+++|+|++++|++++ ++.|++||. .+ ++..... ...
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~----v~~~~~spdg~~l~~~~-~~~i~~~d~---~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPEL----FEAPNWSPDGKYLLLNS-EGLLYRLSL---AGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSC----CEEEEECTTSSEEEEEE-TTEEEEEES---SSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcc----eEeeEECCCCCEEEEEc-CCeEEEEeC---CCCCCceEecccccccccc
Confidence 4568899999998 4556678888 99999999999999986 789999998 44 4443332 113
Q ss_pred eEEEeeccceee--e-----EEEE---eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEE-EEeCCCeEEEEEcCCC
Q psy13856 109 LTVYSTKLTRIL--I-----LVRI---CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA-SCSQDRKVIIWTSNDY 177 (271)
Q Consensus 109 ~~~~~~~~~~l~--~-----~v~i---~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~-s~~~dg~i~iwd~~~~ 177 (271)
...++.+++.++ . ...+ .... .....+..+ ..+..++|+| ++.+|+ +++.|+.+++|++...
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~-~~~~~~~~sp----dg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTG--GTPRLMTKN-LPSYWHGWSP----DGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTC--CCCEECCSS-SSEEEEEECT----TSSEEEEEEEETTEEEEEEEETT
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCC--CceEEeecC-CCccceEECC----CCCEEEEEECCCCceEEEEEECC
Confidence 356777777776 1 2333 2222 223344433 3488999999 677766 7888999999996432
Q ss_pred ceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 178 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 178 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
... ...+..+...+.+++|+|+|++|+.++ .|+.+++|+++
T Consensus 162 ~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 162 SGV-ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp TCC-EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCc-ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 211 455667888999999999999888776 48999999987
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.58 E-value=9.5e-14 Score=130.58 Aligned_cols=174 Identities=10% Similarity=-0.034 Sum_probs=128.8
Q ss_pred CCCCCCCEEEEccCCCeEEeccc----eeeecc-----------ccccccccceEEEEc-CCCCeEEEEeCCCcEEEEEe
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST----ISLLQG-----------SVYLRRESNKAGALS-PKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~-----------h~~~~~~~i~~~~~s-~~~~~l~s~s~d~~i~~~d~ 93 (271)
...|||+.|+.+. ++.|.+|+. +..+.. |... +.+++|+ |||+.|++++ ++.+++|+.
T Consensus 251 ~~SpDG~~la~~~-~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~----v~~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 251 HLNTDGRRILFSK-GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPS----KFAEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp EEEESSSCEEEEE-TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGG----GGEEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred eEcCCCCEEEEEe-CCEEEEecCCceEeeeeccCcccccccccccccc----cceeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 3457999888875 799999997 333333 3335 8899999 9999999887 788989987
Q ss_pred ecCCCCceeeccc-----eeeEEEeeccceee-----eEEE-E-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEE
Q psy13856 94 VQSSSPACLQPKY-----FKLTVYSTKLTRIL-----ILVR-I-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 94 ~~~~~~~~~~~~~-----~~~~~~~~~~~~l~-----~~v~-i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
..+....... .....++ +++.++ ..+. + ...+ .....+.+|...+..++|+| |+.+|+
T Consensus 325 ---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~--~~~~~l~~~~~~~~~~~~Sp----DG~~la 394 (1045)
T 1k32_A 325 ---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT--GKAEKFEENLGNVFAMGVDR----NGKFAV 394 (1045)
T ss_dssp ---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT--CCEEECCCCCCSEEEEEECT----TSSEEE
T ss_pred ---CCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC--CCceEecCCccceeeeEECC----CCCEEE
Confidence 4444433221 1234455 666555 4555 5 2222 12334447888999999999 799999
Q ss_pred EEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC----------cEEEEEeCCC
Q psy13856 162 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN----------SVSLWKENTD 221 (271)
Q Consensus 162 s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----------~v~iw~~~~~ 221 (271)
+++.++.+++||+.+++. .....+|...+.+++|+|||++|++++.++ .|++||+.++
T Consensus 395 ~~~~~~~v~~~d~~tg~~--~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred EECCCCeEEEEECCCCce--EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 999999999999998875 455568888999999999999999887654 8999998764
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=3.7e-12 Score=104.95 Aligned_cols=190 Identities=7% Similarity=0.010 Sum_probs=122.7
Q ss_pred CCCCCEEEEcc-CCCeEEeccc-----eeeecc--cccc------ccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCC
Q psy13856 32 LRIGHTLISCD-TQAHIGIRST-----ISLLQG--SVYL------RRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSS 97 (271)
Q Consensus 32 ~~~g~~l~s~s-~d~~i~lwd~-----~~~~~~--h~~~------~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~ 97 (271)
.|||++|++++ .++.|++|++ ...+.. +.+. ....+.+++|+|+|+.+++...++.+++|++. .
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~--~ 171 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS--D 171 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC--T
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC--C
Confidence 47999777777 7899999997 111111 1100 01126789999999966666778899999983 1
Q ss_pred CCceeecc--------ceeeEEEeeccceee------eEEEE--ee--CCceEEeEEecCCC------cceEEEEEccCC
Q psy13856 98 SPACLQPK--------YFKLTVYSTKLTRIL------ILVRI--CG--GDKWIEETKLENHS------DWVRDVAWAPSW 153 (271)
Q Consensus 98 ~~~~~~~~--------~~~~~~~~~~~~~l~------~~v~i--~~--~~~~~~~~~~~~h~------~~v~~v~~~p~~ 153 (271)
.+...... ......++.++++++ +.+.+ .. .+.+.....+.... ..+..++|+|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-- 249 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-- 249 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT--
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC--
Confidence 33332111 112346777777554 55666 22 34444444444332 4588999999
Q ss_pred CCCCcEE-EEEeCCCeEEEEEcCCC-ceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-CcEEEEEeCCC-CceeEE
Q psy13856 154 GLSKCMI-ASCSQDRKVIIWTSNDY-VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-NSVSLWKENTD-GAWQCI 227 (271)
Q Consensus 154 ~~~~~~l-~s~~~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-~~v~iw~~~~~-~~~~~~ 227 (271)
|+++| +++..++.|.+|++... .......+..+...+..++|+|+|++|++++.+ +.|.+|+++.. +....+
T Consensus 250 --dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 250 --DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp --TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred --CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEec
Confidence 68866 66667899999999733 221234455566678899999999998888764 89999977532 344433
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.57 E-value=2.9e-13 Score=110.52 Aligned_cols=179 Identities=7% Similarity=-0.030 Sum_probs=122.4
Q ss_pred CCCCCCEEEEcc------------CCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy13856 31 PLRIGHTLISCD------------TQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 31 ~~~~g~~l~s~s------------~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~ 93 (271)
..|||+.+++++ .++.|.+||. ...+.. ... +.+++|+|++++|+++ ++.+++||.
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~----~~~~~~s~dg~~l~~~--~~~i~~~d~ 161 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQ----ITMLAWARDGSKLYGL--GRDLHVMDP 161 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSS----CCCEEECTTSSCEEEE--SSSEEEEET
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCC----cceeEECCCCCEEEEe--CCeEEEEEC
Confidence 357898888886 5799999998 233332 334 6889999999988887 688999998
Q ss_pred ecCCCCceeeccce----eeEEEeeccceee------e-----------------------EEEE--eeCCceEEeEEec
Q psy13856 94 VQSSSPACLQPKYF----KLTVYSTKLTRIL------I-----------------------LVRI--CGGDKWIEETKLE 138 (271)
Q Consensus 94 ~~~~~~~~~~~~~~----~~~~~~~~~~~l~------~-----------------------~v~i--~~~~~~~~~~~~~ 138 (271)
.+++....... ....++.+++.+. + .+.+ ...+... ...+.
T Consensus 162 ---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~ 237 (337)
T 1pby_B 162 ---EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR 237 (337)
T ss_dssp ---TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE
T ss_pred ---CCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC
Confidence 55555433211 1112333333332 1 2344 2233222 33344
Q ss_pred CCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEe
Q psy13856 139 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 139 ~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
.+...+.+++|+| ++.+++++ ++.|.+||..+++. ...+. ....+.+++|+|+|++|++++.|+.|++||+
T Consensus 238 ~~~~~~~~~~~s~----dg~~l~~~--~~~v~~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 238 IMDVFYFSTAVNP----AKTRAFGA--YNVLESFDLEKNAS--IKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp ECSSCEEEEEECT----TSSEEEEE--ESEEEEEETTTTEE--EEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred CCCCceeeEEECC----CCCEEEEe--CCeEEEEECCCCcC--cceec-CCCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 5667788999999 68888887 79999999988764 33333 2346789999999999999988999999999
Q ss_pred CCCCceeEEEEecc
Q psy13856 219 NTDGAWQCITEMGK 232 (271)
Q Consensus 219 ~~~~~~~~~~~~~~ 232 (271)
.++ +.+..+..
T Consensus 309 ~~~---~~~~~~~~ 319 (337)
T 1pby_B 309 ETL---EKKGQVDL 319 (337)
T ss_dssp TTC---CEEEEEEC
T ss_pred cCC---cEEEEEEc
Confidence 877 55555544
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=2.7e-13 Score=111.06 Aligned_cols=150 Identities=10% Similarity=-0.004 Sum_probs=104.6
Q ss_pred EEEEccCCCeEEeccc-----eee--eccccccccccceEEEEcCCCCeEEEEeCC-CcEEEEEeecCCCCceeecccee
Q psy13856 37 TLISCDTQAHIGIRST-----ISL--LQGSVYLRRESNKAGALSPKLNRSATSSFH-EAAKHLGTVQSSSPACLQPKYFK 108 (271)
Q Consensus 37 ~l~s~s~d~~i~lwd~-----~~~--~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d-~~i~~~d~~~~~~~~~~~~~~~~ 108 (271)
++++++.|+.|++|++ ... ...|... +.+++|+|++++|++++.+ +.+++|++ ..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~v~~~~~---~~---------- 69 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQ----VQPMVVSPDKRYLYVGVRPEFRVLAYRI---AP---------- 69 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSC----CCCEEECTTSSEEEEEETTTTEEEEEEE---CT----------
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCC----CceEEECCCCCEEEEeecCCCeEEEEEe---cC----------
Confidence 4555588999999987 111 1235555 8899999999998888877 89999998 20
Q ss_pred eEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceee-eeeec
Q psy13856 109 LTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWT-PFIMN 186 (271)
Q Consensus 109 ~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~-~~~~~ 186 (271)
..+....+..+..+. .+..++|+| ++.++++++ .++.|.+||+..+.... ...+.
T Consensus 70 ------------------~~~~~~~~~~~~~~~-~~~~~~~s~----dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 126 (343)
T 1ri6_A 70 ------------------DDGALTFAAESALPG-SLTHISTDH----QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 126 (343)
T ss_dssp ------------------TTCCEEEEEEEECSS-CCSEEEECT----TSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC
T ss_pred ------------------CCCceeeccccccCC-CCcEEEEcC----CCCEEEEEecCCCeEEEEECCCCcccccccccc
Confidence 012223334444333 788999999 688776655 48999999995332111 22333
Q ss_pred cCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEE
Q psy13856 187 TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCI 227 (271)
Q Consensus 187 ~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~ 227 (271)
....+.+++|+|+|+++++++ .|+.|++|++...+.....
T Consensus 127 -~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 127 -GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp -CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred -CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 334688999999999888887 7999999999875555443
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.57 E-value=7.8e-14 Score=126.40 Aligned_cols=182 Identities=14% Similarity=0.013 Sum_probs=127.0
Q ss_pred cccCCCCCCCEEEEccC-CC-----eEEeccc-----eeeeccccccc--------------------cccceEEEEcCC
Q psy13856 27 YTESPLRIGHTLISCDT-QA-----HIGIRST-----ISLLQGSVYLR--------------------RESNKAGALSPK 75 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~-d~-----~i~lwd~-----~~~~~~h~~~~--------------------~~~i~~~~~s~~ 75 (271)
......|||++|++++. |+ .|++||+ ...+..+.... ...+.+++||||
T Consensus 40 ~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred CCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 34455679999999998 88 9999998 23333221100 012788999999
Q ss_pred CCeEEEEeCCCcEEEEEeecCCCC---ceeecc----ceeeEEEeeccceee----eEEEE-e-eCCceEEeEEecCCCc
Q psy13856 76 LNRSATSSFHEAAKHLGTVQSSSP---ACLQPK----YFKLTVYSTKLTRIL----ILVRI-C-GGDKWIEETKLENHSD 142 (271)
Q Consensus 76 ~~~l~s~s~d~~i~~~d~~~~~~~---~~~~~~----~~~~~~~~~~~~~l~----~~v~i-~-~~~~~~~~~~~~~h~~ 142 (271)
|++|++++. +.|++||. .++ ...... ......++++++.++ +.|.+ . ..+ ........+..
T Consensus 120 g~~l~~~~~-~~i~~~d~---~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g--~~~~~~~~~~~ 193 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDL---KQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASG--RQMQLTADGST 193 (741)
T ss_dssp SSEEEEEET-TEEEEEES---SSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTT--EEEECCCCCCS
T ss_pred CCEEEEEeC-CcEEEEEC---CCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCC--CEEEeccCCcc
Confidence 999999886 89999998 444 332222 235567888898887 56776 2 333 33333333332
Q ss_pred c----------------eEEEEEccCCCCCCcEEEEEeCCC---------------------------------eEEEEE
Q psy13856 143 W----------------VRDVAWAPSWGLSKCMIASCSQDR---------------------------------KVIIWT 173 (271)
Q Consensus 143 ~----------------v~~v~~~p~~~~~~~~l~s~~~dg---------------------------------~i~iwd 173 (271)
. +.++.|+| |+++|+.++.|+ .|.+||
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~Sp----Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAP----DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECT----TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred ceeccccceeeeeccccccceEECC----CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2 47899999 799999988765 889999
Q ss_pred cCC-Cceeeeeeec--cCCCCeEEEEEecCCCEEEEEEC-----CCcEEEEEeCCC
Q psy13856 174 SND-YVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCG-----DNSVSLWKENTD 221 (271)
Q Consensus 174 ~~~-~~~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s~-----D~~v~iw~~~~~ 221 (271)
+.+ ++. ..... .|...+..++| |||++|++++. +..|++||+.++
T Consensus 270 ~~~~~~~--~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 270 PAEQAQT--QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp SSTTCCC--EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCCCce--EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 987 764 22222 57788999999 99999987764 567999998865
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.54 E-value=5.1e-13 Score=121.03 Aligned_cols=177 Identities=10% Similarity=-0.033 Sum_probs=126.6
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc--e-----eeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST--I-----SLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~--~-----~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
......|||++|++++. +.|.+||+ - ..+..|... +..++|||||++|+.++ ++.|++||. .++
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~----~~~~~~SPDG~~la~~~-~~~i~~~d~---~~g 182 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGF----ATDAKLSPKGGFVSFIR-GRNLWVIDL---ASG 182 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSC----EEEEEECTTSSEEEEEE-TTEEEEEET---TTT
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcc----cccccCCCCCCEEEEEe-CCcEEEEec---CCC
Confidence 44455689999999987 99999998 2 234556666 89999999999999887 458999998 555
Q ss_pred ceeeccc---------------------eeeEEEeeccceee-----e--------------------------------
Q psy13856 100 ACLQPKY---------------------FKLTVYSTKLTRIL-----I-------------------------------- 121 (271)
Q Consensus 100 ~~~~~~~---------------------~~~~~~~~~~~~l~-----~-------------------------------- 121 (271)
....... .....++++++.++ +
T Consensus 183 ~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 183 RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 5443321 13466788888776 1
Q ss_pred -EEEE--eeC-CceEEeEEec--CCCcceEEEEEccCCCCCCcEEEEEeC-----CCeEEEEEcCCCceeeeeeeccCCC
Q psy13856 122 -LVRI--CGG-DKWIEETKLE--NHSDWVRDVAWAPSWGLSKCMIASCSQ-----DRKVIIWTSNDYVTWTPFIMNTFDD 190 (271)
Q Consensus 122 -~v~i--~~~-~~~~~~~~~~--~h~~~v~~v~~~p~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~h~~ 190 (271)
.+.+ ... + +...... .|...+..++| | |+++|+.++. +..|++||..++.. ...+..+..
T Consensus 263 ~~l~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~-p----Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~ 333 (741)
T 2ecf_A 263 VKLGVISPAEQA--QTQWIDLGKEQDIYLARVNW-R----DPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSP 333 (741)
T ss_dssp EEEEEECSSTTC--CCEEECCCSCSSEEEEEEEE-E----ETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECS
T ss_pred eEEEEEECCCCC--ceEEecCCCCcceEEEEEEe-C----CCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCC
Confidence 3444 223 3 2222222 47788999999 9 7898887654 67899999998875 344444432
Q ss_pred ----CeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 191 ----VVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 191 ----~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.+..++|+|+|+++++++.|+.++||.++..
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~ 368 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK 368 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC
Confidence 4568999999999999999998888887643
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=2.2e-12 Score=106.12 Aligned_cols=181 Identities=8% Similarity=0.029 Sum_probs=126.3
Q ss_pred cccCCCCCCCEEEEccC-------CCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEE-EEeCCCcEEEEEe
Q psy13856 27 YTESPLRIGHTLISCDT-------QAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGT 93 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~-------d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~ 93 (271)
+.....++|+.+++++. ++.|.+||. ...+.. ... +..++|+|++++++ +...++.|.+||.
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLK----PFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSC----CCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCC----cceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 33444568887777663 568999998 333332 233 67899999999554 5556799999998
Q ss_pred ecCCCCceeeccce--------------eeEEEeeccceee-------eEEEEeeCCceEEeEEecCCCcceEEEEEccC
Q psy13856 94 VQSSSPACLQPKYF--------------KLTVYSTKLTRIL-------ILVRICGGDKWIEETKLENHSDWVRDVAWAPS 152 (271)
Q Consensus 94 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~-------~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~ 152 (271)
.+++....... ....++.+++.+. +.|.+.+....+....+..+...+.+++|+|
T Consensus 119 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~- 194 (353)
T 3vgz_A 119 ---KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS- 194 (353)
T ss_dssp ---TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET-
T ss_pred ---CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC-
Confidence 66665544321 2245566666554 3455522222256666665666688999999
Q ss_pred CCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec----cCCCCeEEEEEecCCCEEEEEEC-CCcEEEEEeCCC
Q psy13856 153 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTD 221 (271)
Q Consensus 153 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~h~~~v~~v~~~~~g~~l~s~s~-D~~v~iw~~~~~ 221 (271)
++.++++++.++.+.+||..+++. ...+. ++...+..++|+|+|++++.++. ++.|.+||+.++
T Consensus 195 ---dg~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 195 ---EGKRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp ---TTTEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred ---CCCEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 689999999999999999998775 33332 24556888999999998777765 589999999876
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.51 E-value=1.3e-11 Score=100.71 Aligned_cols=183 Identities=9% Similarity=0.002 Sum_probs=122.8
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeC-CCcEEEEEeecCCCCce-eecc-
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSF-HEAAKHLGTVQSSSPAC-LQPK- 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~-d~~i~~~d~~~~~~~~~-~~~~- 105 (271)
.+..+++++.++.|++||. ...+..+... + .++|+|+++++++++. ++.|++||. .+++. ....
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~----~-~~~~s~dg~~l~~~~~~~~~i~~~d~---~~~~~~~~~~~ 80 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDF----V-DTAITSDCSNVVVTSDFCQTLVQIET---QLEPPKVVAIQ 80 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCE----E-EEEECSSSCEEEEEESTTCEEEEEEC---SSSSCEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCc----c-eEEEcCCCCEEEEEeCCCCeEEEEEC---CCCceeEEecc
Confidence 3456889999999999998 3444445555 6 9999999997766665 889999998 55554 3222
Q ss_pred --c-eee-EEEeeccceee----e----EEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCc-EEEEEeCCCe-E
Q psy13856 106 --Y-FKL-TVYSTKLTRIL----I----LVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRK-V 169 (271)
Q Consensus 106 --~-~~~-~~~~~~~~~l~----~----~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~-~l~s~~~dg~-i 169 (271)
. ... ..++.++++++ . .+.+ ...+ +.+..+.. .....+++|+| +++ +++++..++. +
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~--~~~~~~~~-~~~~~~~~~sp----dg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN--KFISTIPI-PYDAVGIAISP----NGNGLILIDRSSANTV 153 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT--EEEEEEEC-CTTEEEEEECT----TSSCEEEEEETTTTEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC--CeEEEEEC-CCCccceEECC----CCCEEEEEecCCCceE
Confidence 1 123 45667777666 3 7887 2334 55555553 34568999999 576 4555566688 9
Q ss_pred EEEEcCCCceee-e-eeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEEEEec
Q psy13856 170 IIWTSNDYVTWT-P-FIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 170 ~iwd~~~~~~~~-~-~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
.+|++....... . ............++|+|+|++++.++ .++.|++||+.++.....+..+.
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 999998643210 1 11223345689999999999665555 58999999998765422244443
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=124.63 Aligned_cols=179 Identities=10% Similarity=0.047 Sum_probs=120.8
Q ss_pred ccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeC---------CCcEEEEEe
Q psy13856 28 TESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSF---------HEAAKHLGT 93 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~---------d~~i~~~d~ 93 (271)
.....|||++++++ .|+.|++||. ...+..|.. ....+.+++|||||++|+.++. ++.+++||+
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM-KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH-HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc-cccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 44456789766655 5899999998 334444433 0112789999999999998876 789999998
Q ss_pred ecCCCCce---eecc-ceeeEEEeeccceee----eEEEE--eeCCceEEeEEe-cCCCcce-----------------E
Q psy13856 94 VQSSSPAC---LQPK-YFKLTVYSTKLTRIL----ILVRI--CGGDKWIEETKL-ENHSDWV-----------------R 145 (271)
Q Consensus 94 ~~~~~~~~---~~~~-~~~~~~~~~~~~~l~----~~v~i--~~~~~~~~~~~~-~~h~~~v-----------------~ 145 (271)
.+++. .... ......++++++.++ +.|++ ...+ ...+.. .++...| .
T Consensus 98 ---~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g--~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 ---SNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGD--PPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp ---TTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTS--CCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred ---CCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCC--CcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 66655 2222 345678899999888 67777 2233 222111 2222222 4
Q ss_pred EEEEccCCCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCcee---ee---eee
Q psy13856 146 DVAWAPSWGLSKCMIASCSQDR----------------------------------KVIIWTSNDYVTW---TP---FIM 185 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~dg----------------------------------~i~iwd~~~~~~~---~~---~~~ 185 (271)
+++|+| ||++|+.++.|. .|++||+.++... .. ..+
T Consensus 173 ~~~wSP----DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 173 ALWWSP----NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp CEEECT----TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH
T ss_pred cEEECC----CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC
Confidence 899999 799999988652 7889999876530 01 123
Q ss_pred ccCCCCeEEEEEecCCCEEEEEECC----CcEEEEE
Q psy13856 186 NTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWK 217 (271)
Q Consensus 186 ~~h~~~v~~v~~~~~g~~l~s~s~D----~~v~iw~ 217 (271)
.+|...+.+++|+||++++++.... ..|.+||
T Consensus 249 ~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 4678889999999998877775432 2488888
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=2.5e-11 Score=99.74 Aligned_cols=185 Identities=5% Similarity=-0.067 Sum_probs=122.7
Q ss_pred CCCCCC-EEEEccCCCeEEeccc-----eeeeccccccc-----cccceEEEEcCCCCeEEEEe--CCCcEEEEEeecCC
Q psy13856 31 PLRIGH-TLISCDTQAHIGIRST-----ISLLQGSVYLR-----RESNKAGALSPKLNRSATSS--FHEAAKHLGTVQSS 97 (271)
Q Consensus 31 ~~~~g~-~l~s~s~d~~i~lwd~-----~~~~~~h~~~~-----~~~i~~~~~s~~~~~l~s~s--~d~~i~~~d~~~~~ 97 (271)
..++|+ ++++...++.|.+||. +..+..+.... ...+.+++|+|++++++.++ .++.|.+||. .
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~---~ 172 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG---G 172 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET---T
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC---C
Confidence 347888 5666677899999998 34443332110 01157899999999877766 4788999998 6
Q ss_pred CCceeeccc-----eeeEEEeeccceee-----eEEEE--eeCCceEEeEEecC----CCcceEEEEEccCCCCCCcEEE
Q psy13856 98 SPACLQPKY-----FKLTVYSTKLTRIL-----ILVRI--CGGDKWIEETKLEN----HSDWVRDVAWAPSWGLSKCMIA 161 (271)
Q Consensus 98 ~~~~~~~~~-----~~~~~~~~~~~~l~-----~~v~i--~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~~~l~ 161 (271)
+++...... .....++.+++.++ +.+.+ ..++ +....+.. +...+.+++|+| ++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~s~----dg~~l~ 246 (353)
T 3vgz_A 173 NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN--KILSRKKLLDDGKEHFFINISLDT----ARQRAF 246 (353)
T ss_dssp TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT--EEEEEEECCCSSSCCCEEEEEEET----TTTEEE
T ss_pred CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC--eEEEEEEcCCCCCCcccceEEECC----CCCEEE
Confidence 666655432 23345666676655 55666 2333 44444432 556788899999 577655
Q ss_pred EEe-CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEEEEec
Q psy13856 162 SCS-QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 162 s~~-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
.++ .++.|.+||..+++. ...+.... ...++|+|+|++++.++ .++.|.+||..++ +.+..+.
T Consensus 247 ~~~~~~~~v~~~d~~~~~~--~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~ 311 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNI--LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY---KVVKTFD 311 (353)
T ss_dssp EEESSSSEEEEEETTTCCE--EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT---EEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcE--EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC---eEEEEEe
Confidence 554 559999999988775 33333222 25699999999766665 6899999999876 4444443
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.49 E-value=4.8e-12 Score=103.36 Aligned_cols=189 Identities=8% Similarity=-0.011 Sum_probs=120.3
Q ss_pred cCCCCCCCEEEEc-cCCCeEEeccc------eeeeccccccccccceEEEEcCCCCeEEEEeCCC---cEEEEEeecCCC
Q psy13856 29 ESPLRIGHTLISC-DTQAHIGIRST------ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHE---AAKHLGTVQSSS 98 (271)
Q Consensus 29 ~~~~~~g~~l~s~-s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~---~i~~~d~~~~~~ 98 (271)
....|+|++++++ ..++.|.+||. ...+..+... ..+++|+|++++++++..++ .|++||. .+
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~---~~ 117 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS----MADVDITPDDQFAVTVTGLNHPFNMQSYSF---LK 117 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC----CCCEEECTTSSEEEECCCSSSSCEEEEEET---TT
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC----ccceEECCCCCEEEEecCCCCcccEEEEEC---CC
Confidence 3345789855544 45899999998 2233444444 44499999999998655553 8999998 66
Q ss_pred Cceeeccc----eeeEEEeeccceee------eE-EEE---eeCCceEEe-EEecCCCcceEEEEEccCCCCCCcEE-EE
Q psy13856 99 PACLQPKY----FKLTVYSTKLTRIL------IL-VRI---CGGDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMI-AS 162 (271)
Q Consensus 99 ~~~~~~~~----~~~~~~~~~~~~l~------~~-v~i---~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~~~~l-~s 162 (271)
++.+.... .....++++++++. +. +.+ ...+..... ............++|+| +++++ ++
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp----dg~~l~v~ 193 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP----DGNFAFVA 193 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT----TSSEEEEE
T ss_pred CCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC----CCCEEEEE
Confidence 66655442 23455667776544 33 555 111211111 11223445678999999 67755 55
Q ss_pred EeCCCeEEEEEcCCCceee-eeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEEEEe
Q psy13856 163 CSQDRKVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEM 230 (271)
Q Consensus 163 ~~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~ 230 (271)
+..++.|.+||+.+++... ...+. ....+..++|+|+|++++.++ .++.|.+||+.++ +...+..+
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~-~~~~~~~~ 261 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG-TLSFVKSF 261 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT-EEEEEEEE
T ss_pred eCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC-ceeeeccc
Confidence 5578999999998776411 22233 346678899999999776665 4788999999865 33334444
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.49 E-value=7.6e-11 Score=97.61 Aligned_cols=189 Identities=11% Similarity=-0.014 Sum_probs=120.2
Q ss_pred CCCCCCEEEEccCC----CeEEeccc------ee---eeccccccccccceEEEEcCCCCeEEEEe-CCCcEEEEEeecC
Q psy13856 31 PLRIGHTLISCDTQ----AHIGIRST------IS---LLQGSVYLRRESNKAGALSPKLNRSATSS-FHEAAKHLGTVQS 96 (271)
Q Consensus 31 ~~~~g~~l~s~s~d----~~i~lwd~------~~---~~~~h~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~~~d~~~~ 96 (271)
..|||++|++++.+ +.|.+|++ +. ....+... +..+++ ++++|++++ .++.+.+|++.
T Consensus 57 ~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~----p~~~~~--dg~~l~~~~~~~~~v~~~~~~-- 128 (361)
T 3scy_A 57 PSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD----PCYLTT--NGKNIVTANYSGGSITVFPIG-- 128 (361)
T ss_dssp ECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC----EEEEEE--CSSEEEEEETTTTEEEEEEBC--
T ss_pred ECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC----cEEEEE--CCCEEEEEECCCCEEEEEEeC--
Confidence 35799988888876 79999987 11 22223333 567777 788777766 68899999983
Q ss_pred CCCceeecc----c--------------e-eeEEEeeccceee------eEEEE--eeCCc-------eEEe----EEec
Q psy13856 97 SSPACLQPK----Y--------------F-KLTVYSTKLTRIL------ILVRI--CGGDK-------WIEE----TKLE 138 (271)
Q Consensus 97 ~~~~~~~~~----~--------------~-~~~~~~~~~~~l~------~~v~i--~~~~~-------~~~~----~~~~ 138 (271)
....+... . + ....+++++++++ +.+.+ ..... +... ....
T Consensus 129 -~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 129 -QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp -TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred -CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 22221111 0 0 2256677777554 55665 22211 1111 2223
Q ss_pred CCCcceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeee---ccCCCCeEEEEEecCCCEEEEEECC--Cc
Q psy13856 139 NHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLTGDILTVSCGD--NS 212 (271)
Q Consensus 139 ~h~~~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~v~~~~~g~~l~s~s~D--~~ 212 (271)
.+......++|+| ++++++.++ .++.|.+|++.++.......+ ..+......++|+|+|++|+++..+ +.
T Consensus 208 ~~~~~~~~~~~sp----dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 208 APGSGPRHLIFNS----DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp CTTCCEEEEEECT----TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred CCCCCCeEEEEcC----CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 3455678999999 688777666 689999999986643212222 2334557899999999998776654 89
Q ss_pred EEEEEeC-CCCceeEEEEecc
Q psy13856 213 VSLWKEN-TDGAWQCITEMGK 232 (271)
Q Consensus 213 v~iw~~~-~~~~~~~~~~~~~ 232 (271)
|.+|+++ ..+.+..+..+..
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecC
Confidence 9999997 3456666665543
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.49 E-value=5e-12 Score=103.77 Aligned_cols=186 Identities=10% Similarity=-0.031 Sum_probs=117.7
Q ss_pred CCCCCCE-EEEccCCCeEEeccc-----eeeec-cc-----cccccccceEEEEcCCCCeEEEEeCC------------C
Q psy13856 31 PLRIGHT-LISCDTQAHIGIRST-----ISLLQ-GS-----VYLRRESNKAGALSPKLNRSATSSFH------------E 86 (271)
Q Consensus 31 ~~~~g~~-l~s~s~d~~i~lwd~-----~~~~~-~h-----~~~~~~~i~~~~~s~~~~~l~s~s~d------------~ 86 (271)
..|+|+. ++++..++.|.+||. ...+. .+ ... +.+++|+|+|+++++++.+ +
T Consensus 50 ~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 50 MAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRS----MYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEEC----SSCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccc----ccceEECCCCCEEEEEcccccccccccccCCC
Confidence 3478874 566678899999998 22332 22 223 6789999999999998865 8
Q ss_pred cEEEEEeecCCCCceeecc----ceeeEEEeeccceee--eEEEE--eeCCceEEeEEecC-------------------
Q psy13856 87 AAKHLGTVQSSSPACLQPK----YFKLTVYSTKLTRIL--ILVRI--CGGDKWIEETKLEN------------------- 139 (271)
Q Consensus 87 ~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~l~--~~v~i--~~~~~~~~~~~~~~------------------- 139 (271)
.|.+||..++.....+... ......++.+++.++ +.+.+ ..++ +....+..
T Consensus 126 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 126 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTG--KYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp EEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTC--CEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred eEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCcEEEEeCCCC--ceeccccccccCCccccCccceeeecC
Confidence 9999998322112222211 112233555555333 33443 1122 22222211
Q ss_pred -------------------------------------------------CCcceEEEEEccCCCCCCcEEEEEeCCCeEE
Q psy13856 140 -------------------------------------------------HSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 170 (271)
Q Consensus 140 -------------------------------------------------h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~ 170 (271)
+...+.+++|+|. ++.+++++ ++.|.
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---dg~~l~~~--~~~v~ 278 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK---DPNQIYGV--LNRLA 278 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSS---CTTEEEEE--ESEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCC---CCCEEEEE--cCeEE
Confidence 1124456777783 47777777 88999
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
+||+.+++. ...+. ....+.+++|+|+|++|++++.++.|++||..+. +.+.+++..
T Consensus 279 ~~d~~~~~~--~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~---~~~~~~~~~ 335 (349)
T 1jmx_B 279 KYDLKQRKL--IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL---EKVKNIKLP 335 (349)
T ss_dssp EEETTTTEE--EEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT---EEEEEEECS
T ss_pred EEECccCeE--EEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEecccc---ceeeeeecC
Confidence 999998764 33333 2345778999999998888888999999999876 566666443
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.48 E-value=1.3e-12 Score=122.99 Aligned_cols=146 Identities=6% Similarity=-0.080 Sum_probs=118.1
Q ss_pred cccCCCCCCCEEEEccCCCeEE-eccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIG-IRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~-lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
...... ||+.|+.++.++.+. +|+. ...+.+|... +..++|+|||++|++++.++.+++||+ .+
T Consensus 341 ~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~----~~~~~~SpDG~~la~~~~~~~v~~~d~---~t--- 409 (1045)
T 1k32_A 341 VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGN----VFAMGVDRNGKFAVVANDRFEIMTVDL---ET--- 409 (1045)
T ss_dssp EEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCS----EEEEEECTTSSEEEEEETTSEEEEEET---TT---
T ss_pred EeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccc----eeeeEECCCCCEEEEECCCCeEEEEEC---CC---
Confidence 344455 888899988888888 8887 3444567677 899999999999999999999999998 32
Q ss_pred eeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCC----------eEEE
Q psy13856 102 LQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR----------KVII 171 (271)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg----------~i~i 171 (271)
+ +....+.+|...+.+++|+| |+++|++++.++ .|++
T Consensus 410 ---------------------------g--~~~~~~~~~~~~v~~~~~Sp----DG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 410 ---------------------------G--KPTVIERSREAMITDFTISD----NSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp ---------------------------C--CEEEEEECSSSCCCCEEECT----TSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred ---------------------------C--ceEEeccCCCCCccceEECC----CCCeEEEEecCccccccCCCCCeEEE
Confidence 2 23333446888899999999 799998887654 8999
Q ss_pred EEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 172 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 172 wd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
||+.+++ ...+..|...+..++|+|+|++|+.++.++...+|+..
T Consensus 457 ~d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 457 YDMEGRK---IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EETTTTE---EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred EECCCCc---EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 9998865 55667788889999999999999999998888888754
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.47 E-value=2e-12 Score=116.63 Aligned_cols=173 Identities=13% Similarity=0.054 Sum_probs=118.9
Q ss_pred CCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC-----Cc
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS-----PA 100 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~-----~~ 100 (271)
...|| ..++.+. |+.|++||+ ...+..+... +.+++|+|||+.|+.+ .|+.|++|++ .+ ++
T Consensus 88 ~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~----~~~~~~SpdG~~la~~-~~~~i~v~~~---~~~~~~~g~ 157 (706)
T 2z3z_A 88 LDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEE----TASLDFSPVGDRVAYV-RNHNLYIARG---GKLGEGMSR 157 (706)
T ss_dssp EETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTC----CTTCEECTTSSEEEEE-ETTEEEEEEC---BCTTSCCCC
T ss_pred EECCC-CeEEEEE-CCEEEEEECCCCceEEccCCccc----ccCCcCCCCCCEEEEE-ECCeEEEEec---CcccccCCC
Confidence 34457 4444443 499999998 4445556666 8899999999999885 7899999998 43 43
Q ss_pred eeecc----c---------------eeeEEEeeccceee-eE-------------------------------------E
Q psy13856 101 CLQPK----Y---------------FKLTVYSTKLTRIL-IL-------------------------------------V 123 (271)
Q Consensus 101 ~~~~~----~---------------~~~~~~~~~~~~l~-~~-------------------------------------v 123 (271)
..... . .....+++++++++ .. +
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 33321 1 13556788888777 22 3
Q ss_pred EE--eeCCceEEeEEe--cCCCcceEEEEEccCCCCCCcEEEEEeCCC-----eEEEEEcCCCceeeeeee-ccCCC---
Q psy13856 124 RI--CGGDKWIEETKL--ENHSDWVRDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYVTWTPFIM-NTFDD--- 190 (271)
Q Consensus 124 ~i--~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~-~~h~~--- 190 (271)
.+ ...+ +..... ..|...+.+++|+| |+++|++++.++ .|++||..++... .... ..+..
T Consensus 238 ~~~d~~~~--~~~~~~~~~~~~~~~~~~~~sp----dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 238 GIYHLATG--KTVYLQTGEPKEKFLTNLSWSP----DENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFVETDKHYVE 310 (706)
T ss_dssp EEEETTTT--EEEECCCCSCTTCEEEEEEECT----TSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEEEECSSCCC
T ss_pred EEEECCCC--ceEeeccCCCCceeEeeEEEEC----CCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEEccCCCeEC
Confidence 33 2233 222222 24667899999999 799999888776 8999999987331 1222 22222
Q ss_pred CeEEEEEec--CCCEEEEEECCCcEEEEEeC
Q psy13856 191 VVWNVSWSL--TGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 191 ~v~~v~~~~--~g~~l~s~s~D~~v~iw~~~ 219 (271)
.+..++|+| +|+++++++.|+.++||.++
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 346789999 99999999999999999887
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.47 E-value=4e-13 Score=118.59 Aligned_cols=143 Identities=7% Similarity=-0.010 Sum_probs=107.3
Q ss_pred ecccCCCCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCC----CcEEEEEeecCC
Q psy13856 26 TYTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH----EAAKHLGTVQSS 97 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d----~~i~~~d~~~~~ 97 (271)
....+|..++..+++++.|+.. +||+ ...+..+ . -.+++|+|||++|++++.+ ..|++||. .
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~--~----~~~~~~spDG~~la~~~~~~~~~~~i~~~d~---~ 183 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVA-LYALDGGGLRELARL--P----GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNL---S 183 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEE-EEEEETTEEEEEEEE--S----SCEEEEEEETTEEEEEEEEETTEEEEEEEET---T
T ss_pred eeeeCCCCCeEEEEecCCCCce-EEEccCCcEEEeecC--C----CceEEECCCCCEEEEEEEcCCCCeEEEEEcC---C
Confidence 3444554444466666665554 9998 2223222 2 2688999999999988877 77888886 2
Q ss_pred CCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCC--eEEEEEcC
Q psy13856 98 SPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--KVIIWTSN 175 (271)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg--~i~iwd~~ 175 (271)
++ ....+..|...+..++|+| ||++|+++..++ .|++||..
T Consensus 184 ------------------------------~g---~~~~l~~~~~~~~~~~~Sp----DG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 184 ------------------------------SG---GLRVFDSGEGSFSSASISP----GMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp ------------------------------TC---CCEEECCSSCEEEEEEECT----TSCEEEEEECSSCEEEEEECTT
T ss_pred ------------------------------CC---CceEeecCCCccccceECC----CCCEEEEccCCCeeEEEEEcCC
Confidence 22 1234567888899999999 799999888888 89999998
Q ss_pred CCceeeeeeeccCCCCeEEEE--------EecCCCEEEEEECCCcEEEEEe
Q psy13856 176 DYVTWTPFIMNTFDDVVWNVS--------WSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 176 ~~~~~~~~~~~~h~~~v~~v~--------~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
+++. . .+..|...+..++ |+|||.++++++.|+++++|++
T Consensus 227 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 227 DGSV--E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TCCE--E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCcE--E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8774 3 6677777777677 9999999999999999999998
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.45 E-value=3.8e-12 Score=114.75 Aligned_cols=178 Identities=12% Similarity=0.024 Sum_probs=121.6
Q ss_pred CCEEEEccCCCeEEeccc----e--eeeccccccc-------------cccceEEEEcCCCCeEEEEeCCCcEEEEEeec
Q psy13856 35 GHTLISCDTQAHIGIRST----I--SLLQGSVYLR-------------RESNKAGALSPKLNRSATSSFHEAAKHLGTVQ 95 (271)
Q Consensus 35 g~~l~s~s~d~~i~lwd~----~--~~~~~h~~~~-------------~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~ 95 (271)
|..+++++.|+ | +||. . ..+..|.... ...|.+++|+|| +.++.+ .++.+++||.
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~-- 108 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDM-- 108 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEET--
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEEC--
Confidence 66777777777 8 9998 3 5555543110 023889999999 665555 4599999998
Q ss_pred CCCCceeecc----ceeeEEEeeccceee----eEEEE--eeC-----CceEEeEEecCCCcc--------------eEE
Q psy13856 96 SSSPACLQPK----YFKLTVYSTKLTRIL----ILVRI--CGG-----DKWIEETKLENHSDW--------------VRD 146 (271)
Q Consensus 96 ~~~~~~~~~~----~~~~~~~~~~~~~l~----~~v~i--~~~-----~~~~~~~~~~~h~~~--------------v~~ 146 (271)
.+++..... ......++++++.++ +.|.+ ... + +.......+... +.+
T Consensus 109 -~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~ 185 (706)
T 2z3z_A 109 -LARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKG 185 (706)
T ss_dssp -TTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCS
T ss_pred -CCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCce
Confidence 555554433 224456788888877 67777 233 3 233323333332 488
Q ss_pred EEEccCCCCCCcEEEEEe---------------------------------CCCeEEEEEcCCCceeeeeeeccCCCCeE
Q psy13856 147 VAWAPSWGLSKCMIASCS---------------------------------QDRKVIIWTSNDYVTWTPFIMNTFDDVVW 193 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 193 (271)
+.|+| |+++|++++ .+..|++||+.+++.........|...+.
T Consensus 186 ~~~Sp----Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 186 TFWSP----KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp EEECT----TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred EEECC----CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 99999 799999987 45789999998876421222235677899
Q ss_pred EEEEecCCCEEEEEECCC-----cEEEEEeCCCCcee
Q psy13856 194 NVSWSLTGDILTVSCGDN-----SVSLWKENTDGAWQ 225 (271)
Q Consensus 194 ~v~~~~~g~~l~s~s~D~-----~v~iw~~~~~~~~~ 225 (271)
+++|+|||+.|++++.|+ .|++||+.++....
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 999999999999988775 89999998763333
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=4.9e-11 Score=98.78 Aligned_cols=153 Identities=9% Similarity=-0.032 Sum_probs=102.3
Q ss_pred cCCCCCCCEE-EEccCCCeEEeccc--ee-----e-e----------ccccccccccceEEEEcCCCCeEEEEe-CCCcE
Q psy13856 29 ESPLRIGHTL-ISCDTQAHIGIRST--IS-----L-L----------QGSVYLRRESNKAGALSPKLNRSATSS-FHEAA 88 (271)
Q Consensus 29 ~~~~~~g~~l-~s~s~d~~i~lwd~--~~-----~-~----------~~h~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i 88 (271)
....|||+++ +++..++.|++|++ .. . + ..+... +..++|+|+|+++++++ .++.|
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG----PRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC----EEEEEECTTSSEEEEEETTTCEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC----CeEEEEcCCCCEEEEEcCCCCeE
Confidence 4456799855 55556899999987 11 1 1 112233 67899999999887776 68999
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC--C
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ--D 166 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~--d 166 (271)
++|+. .++.... .........+......++|+| |+++|+++.. +
T Consensus 236 ~v~~~---~~g~~~~---------------------------~~~~~~~~~~~~~~~~i~~sp----dg~~l~v~~~~~~ 281 (361)
T 3scy_A 236 IAFRY---ADGMLDE---------------------------IQTVAADTVNAQGSGDIHLSP----DGKYLYASNRLKA 281 (361)
T ss_dssp EEEEE---ETTEEEE---------------------------EEEEESCSSCCCCEEEEEECT----TSSEEEEEECSSS
T ss_pred EEEEe---cCCceEE---------------------------eEEEecCCCCCCCcccEEECC----CCCEEEEECCCCC
Confidence 99998 2222111 011112223445568999999 7888866655 4
Q ss_pred CeEEEEEcC--CCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCC
Q psy13856 167 RKVIIWTSN--DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT 220 (271)
Q Consensus 167 g~i~iwd~~--~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~ 220 (271)
+.|.+|++. ++.......+.. ...+..++|+|+|++|++++ .++.|.+|+++.
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 899999996 333211333333 45778999999999988888 578999987763
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.43 E-value=3.8e-12 Score=114.93 Aligned_cols=174 Identities=9% Similarity=-0.025 Sum_probs=115.6
Q ss_pred ccCCCCCCCEEEEccCC---------CeEEeccc----eeee---ccccccccccceEEEEcCCCCeEEEEeCCCcEEEE
Q psy13856 28 TESPLRIGHTLISCDTQ---------AHIGIRST----ISLL---QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHL 91 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d---------~~i~lwd~----~~~~---~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~ 91 (271)
.....|||++|++++.+ +.|.+||+ ...+ .+|... +..++|||||+.|+.++. +.|++|
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~----~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAK----LQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCC----CSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccc----ccccEECCCCCEEEEEEC-CeEEEE
Confidence 34456799999999775 77889998 2223 234445 788999999999999876 789999
Q ss_pred EeecCCCCceeeccce-----------------------eeEEEeeccceee--e-------------------------
Q psy13856 92 GTVQSSSPACLQPKYF-----------------------KLTVYSTKLTRIL--I------------------------- 121 (271)
Q Consensus 92 d~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~l~--~------------------------- 121 (271)
+. .++...+.... ....|+++++.++ .
T Consensus 140 ~~---~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 140 AH---VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp SS---SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred EC---CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 98 44443332210 3466788888776 1
Q ss_pred ------------EEEE-e-eCCceEEeEEecCC------CcceEEEEEccCCCCCCcEEEEEeC----CCeEEEEEcCCC
Q psy13856 122 ------------LVRI-C-GGDKWIEETKLENH------SDWVRDVAWAPSWGLSKCMIASCSQ----DRKVIIWTSNDY 177 (271)
Q Consensus 122 ------------~v~i-~-~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~~~~l~s~~~----dg~i~iwd~~~~ 177 (271)
.+.+ . ..+ +....+..+ ...+.+++|+| |++++++.+. +..|++||..++
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~--~~~~~l~~~~~~~~~~~~~~~~~~Sp----Dg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGP--THDLEMMPPDDPRMREYYITMVKWAT----STKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSS--CCCEECCCCCCGGGSSEEEEEEEESS----SSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred cCCCCCCCCCeeEEEEEECCCC--ceeEEeeCCccCCCccceeEEEEEeC----CCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 3444 1 222 222344433 56789999999 7888877653 367999999887
Q ss_pred ceeeeeeec-cCCCCeE----EEEEecCCCEEEE--EECCC------cEEEEE
Q psy13856 178 VTWTPFIMN-TFDDVVW----NVSWSLTGDILTV--SCGDN------SVSLWK 217 (271)
Q Consensus 178 ~~~~~~~~~-~h~~~v~----~v~~~~~g~~l~s--~s~D~------~v~iw~ 217 (271)
+. ...+. .+...+. .++|+|||+.|+. +..|+ .|++|+
T Consensus 291 ~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 291 VC--TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CE--EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred cc--eEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 75 33332 3334443 7899999997765 45677 466666
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.38 E-value=9.9e-12 Score=112.84 Aligned_cols=190 Identities=9% Similarity=0.079 Sum_probs=126.3
Q ss_pred ccceecccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccc--eEEEEcCCCCeEEEEeCC---------
Q psy13856 22 LEIETYTESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESN--KAGALSPKLNRSATSSFH--------- 85 (271)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i--~~~~~s~~~~~l~s~s~d--------- 85 (271)
+....+.....+||++++++ |+.|++||+ ...+.+|... ...+ .+++|||||++|+.++.+
T Consensus 15 ~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD-EFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp SCCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT-TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhh-hhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 33455666777899999886 899999998 4455666542 1112 348899999999998876
Q ss_pred CcEEEEEeecCCCCceeecc----ceeeEEEeeccceee----eEEEE--eeCCceEEeEEecCCCcce-----------
Q psy13856 86 EAAKHLGTVQSSSPACLQPK----YFKLTVYSTKLTRIL----ILVRI--CGGDKWIEETKLENHSDWV----------- 144 (271)
Q Consensus 86 ~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~l~----~~v~i--~~~~~~~~~~~~~~h~~~v----------- 144 (271)
+.+.+||+ .++++.... ......++++++.++ +.|.+ ...+.... .+..++...+
T Consensus 92 ~~~~~~d~---~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 92 ASYDIYDL---NKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEEEEET---TTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHH
T ss_pred eEEEEEEC---CCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCCCCccceecCcccccccc
Confidence 45569998 666655433 235677899999888 66777 23332111 1122332222
Q ss_pred ------EEEEEccCCCCCCcEEEEEeCCC------------------------------------eEEEEEcCC---Cce
Q psy13856 145 ------RDVAWAPSWGLSKCMIASCSQDR------------------------------------KVIIWTSND---YVT 179 (271)
Q Consensus 145 ------~~v~~~p~~~~~~~~l~s~~~dg------------------------------------~i~iwd~~~---~~~ 179 (271)
.++.|+| ||++|+.++.|. .|++||+.+ +..
T Consensus 168 e~~~~~~~~~wSp----Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 168 EVFSAYSALWWSP----NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HTSSSSBCEEECT----TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred hhcCCCcceEECC----CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 3589999 799998875332 578889887 631
Q ss_pred eeeeeec------cCCCCeEEEEEecCCCEEEEEEC----CCcEEEEEeCCCC
Q psy13856 180 WTPFIMN------TFDDVVWNVSWSLTGDILTVSCG----DNSVSLWKENTDG 222 (271)
Q Consensus 180 ~~~~~~~------~h~~~v~~v~~~~~g~~l~s~s~----D~~v~iw~~~~~~ 222 (271)
.....+. +|...+..++|+|||+.++.... +..|++||+.++.
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1122332 37778999999999996665533 3379999998763
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=2.7e-10 Score=94.65 Aligned_cols=183 Identities=6% Similarity=-0.072 Sum_probs=117.1
Q ss_pred cCCCCCCCE--EEEcc-------------CCCeEEeccc------eeeec----cccccccccceEEEEcCCCCeEEEEe
Q psy13856 29 ESPLRIGHT--LISCD-------------TQAHIGIRST------ISLLQ----GSVYLRRESNKAGALSPKLNRSATSS 83 (271)
Q Consensus 29 ~~~~~~g~~--l~s~s-------------~d~~i~lwd~------~~~~~----~h~~~~~~~i~~~~~s~~~~~l~s~s 83 (271)
....|||++ +++++ .++.+.+|++ ...+. .+... +.+++|+|||++++++.
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTG----IHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCC----EEEEEECTTSSEEEEEE
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCc----ceEEEECCCCCEEEEEc
Confidence 455679984 55664 6899999987 11222 13344 78999999999888765
Q ss_pred C-CCcEEEEEeecCCCCceee--cc-------ceeeEEEeeccceee------eEEEE--ee--CCceEE----eEEec-
Q psy13856 84 F-HEAAKHLGTVQSSSPACLQ--PK-------YFKLTVYSTKLTRIL------ILVRI--CG--GDKWIE----ETKLE- 138 (271)
Q Consensus 84 ~-d~~i~~~d~~~~~~~~~~~--~~-------~~~~~~~~~~~~~l~------~~v~i--~~--~~~~~~----~~~~~- 138 (271)
. ++.|++|+... +++... .. ......++.++++++ +.+.+ .+ ++.... +..+.
T Consensus 164 ~~~~~v~~~~~~~--~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 164 LTANKLWTHRKLA--SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TTTTEEEEEEECT--TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CCCCEEEEEEECC--CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 4 67999999831 444321 11 113345677777665 56666 22 343221 11222
Q ss_pred ---CCCc------ceEEEE-EccCCCCCCcEEEEEeCC-C-----eEEEEEcC-CCceeeee-eeccCCCCeEEEEEec-
Q psy13856 139 ---NHSD------WVRDVA-WAPSWGLSKCMIASCSQD-R-----KVIIWTSN-DYVTWTPF-IMNTFDDVVWNVSWSL- 199 (271)
Q Consensus 139 ---~h~~------~v~~v~-~~p~~~~~~~~l~s~~~d-g-----~i~iwd~~-~~~~~~~~-~~~~h~~~v~~v~~~~- 199 (271)
+|.. .+..++ |+| |+++|+++..+ . .|.+|++. ++...... ....+...+..++|+|
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~sp----dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~ 317 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTF----SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC 317 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECT----TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC
T ss_pred CcCCcccccccccccccEEEECC----CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCC
Confidence 2222 588999 999 68887766543 2 89999996 44421111 2333555667889999
Q ss_pred --CCCEEEEEECC-CcEEEEEeCCC
Q psy13856 200 --TGDILTVSCGD-NSVSLWKENTD 221 (271)
Q Consensus 200 --~g~~l~s~s~D-~~v~iw~~~~~ 221 (271)
+|++|++++.+ +.|.+|+++..
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999999864 89999999764
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.37 E-value=2.1e-11 Score=99.97 Aligned_cols=152 Identities=7% Similarity=0.013 Sum_probs=104.3
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeecccc-ccccccceEEEEcCCCCeEE-EEeCCCcEEEEEeecCCCCceee
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSV-YLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~-~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~~~~~~~~~~~ 103 (271)
..+++.++++++.++.|.+||. ...+..+. .. +..++|+|+++.++ ++..++.|.+||. .+++..
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~~~v~~~~~~~i~~~d~---~t~~~~- 78 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFG----PGTAMMAPDNRTAYVLNNHYGDIYGIDL---DTCKNT- 78 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCS----SCEEEECTTSSEEEEEETTTTEEEEEET---TTTEEE-
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCC----CceeEECCCCCEEEEEeCCCCcEEEEeC---CCCcEE-
Confidence 3457889999999999999998 33444332 13 67999999998654 5557899999997 333322
Q ss_pred ccceeeEEEeeccceeeeEEEEeeCCceEEeEEec-CC-----CcceEEEEEccCCCCCCcEEEEEeCC-----------
Q psy13856 104 PKYFKLTVYSTKLTRILILVRICGGDKWIEETKLE-NH-----SDWVRDVAWAPSWGLSKCMIASCSQD----------- 166 (271)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~-~h-----~~~v~~v~~~p~~~~~~~~l~s~~~d----------- 166 (271)
..+. .+ ...+.+++|+| +++++++++.+
T Consensus 79 -------------------------------~~~~~~~~~~~~~~~~~~~~~sp----dg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 79 -------------------------------FHANLSSVPGEVGRSMYSFAISP----DGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp -------------------------------EEEESCCSTTEEEECSSCEEECT----TSSEEEEEEEEEEECSSCEEEC
T ss_pred -------------------------------EEEEcccccccccccccceEECC----CCCEEEEEcccccccccccccC
Confidence 1121 11 23467899999 68898888865
Q ss_pred -CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 167 -RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 167 -g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+.|.+||+.+++.........+...+.+++|+|+|+ +++++ +.|++||+.++ +....+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~---~~~~~~~ 183 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTG---KYTVALP 183 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES--SSEEEECTTTC---CEEEEEC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEcc--CcEEEEeCCCC---ceecccc
Confidence 899999998754211112223344688999999999 55554 34999998876 3444443
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.37 E-value=2.8e-11 Score=98.72 Aligned_cols=148 Identities=10% Similarity=0.090 Sum_probs=104.1
Q ss_pred CEEEEccCCCeEEeccc-----eeeeccccc--cccccceEEEEcCCCCeE-EEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 36 HTLISCDTQAHIGIRST-----ISLLQGSVY--LRRESNKAGALSPKLNRS-ATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 36 ~~l~s~s~d~~i~lwd~-----~~~~~~h~~--~~~~~i~~~~~s~~~~~l-~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
+++++++.++.|.+||. +..+..... . +..++|+|+++.+ ++++.++.|.+||. .+++.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~---~~~~~~~~~-- 72 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPT----PMVPMVAPGGRIAYATVNKSESLVKIDL---VTGETLGRI-- 72 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTC----CCCEEECTTSSEEEEEETTTTEEEEEET---TTCCEEEEE--
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCC----ccceEEcCCCCEEEEEeCCCCeEEEEEC---CCCCeEeeE--
Confidence 47899999999999998 333332221 3 6789999999865 55566789999997 443332210
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecC---CCcceEEEEEccCCCCCCcEEEEEe------------CCCeEEEE
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLEN---HSDWVRDVAWAPSWGLSKCMIASCS------------QDRKVIIW 172 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~~~~l~s~~------------~dg~i~iw 172 (271)
.... |...+.+++|+| ++.++++++ .++.|.+|
T Consensus 73 ----------------------------~~~~~~~~~~~~~~~~~s~----dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 73 ----------------------------DLSTPEERVKSLFGAALSP----DGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp ----------------------------ECCBTTEEEECTTCEEECT----TSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred ----------------------------EcCCcccccccccceEECC----CCCEEEEEecccccccccccccCceEEEE
Confidence 0000 223567899999 688888876 57999999
Q ss_pred EcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 173 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 173 d~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
|..+++. ...+.. ...+.+++|+|+|++|+++ ++.|++||+.++ +....+..
T Consensus 121 d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~---~~~~~~~~ 172 (337)
T 1pby_B 121 DAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAG---TLVEDKPI 172 (337)
T ss_dssp ETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTT---EEEEEECS
T ss_pred ECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCC---cEeeeeec
Confidence 9988764 333332 4467889999999988888 688999999876 45555543
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.37 E-value=2.3e-10 Score=95.44 Aligned_cols=186 Identities=13% Similarity=0.068 Sum_probs=118.8
Q ss_pred cCCCCCCCEEEEccC-CCe--EEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCc
Q psy13856 29 ESPLRIGHTLISCDT-QAH--IGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPA 100 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~-d~~--i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~ 100 (271)
....|||+.|+.++. ++. |.+||. .....++... +..++|+||++.|+.++.++.+++||. .+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~spdg~~l~~~~~~~~l~~~d~---~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDN----TFGGFLSPDDDALFYVKDGRNLMRVDL---ATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBC----SSSCEECTTSSEEEEEETTTEEEEEET---TTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCC----ccceEEcCCCCEEEEEeCCCeEEEEEC---CCCc
Confidence 456789998888887 674 777776 3344455555 557889999999999999999999998 5555
Q ss_pred eeeccce-----e--eEEEeeccceee---------------------------eEEEE-e-eCCceEEeEEecCCCcce
Q psy13856 101 CLQPKYF-----K--LTVYSTKLTRIL---------------------------ILVRI-C-GGDKWIEETKLENHSDWV 144 (271)
Q Consensus 101 ~~~~~~~-----~--~~~~~~~~~~l~---------------------------~~v~i-~-~~~~~~~~~~~~~h~~~v 144 (271)
....... . ....+.+++.++ ..+.+ . .++ ....+..+...+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g---~~~~l~~~~~~~ 190 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG---ESTVILQENQWL 190 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC---CEEEEEEESSCE
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC---ceEEeecCCccc
Confidence 4432211 1 112234454443 23444 2 233 233344566778
Q ss_pred EEEEEccCCCCCCcEEEEEeCC------CeEEEEEcCCCceeeeeeeccCC--CCeEEEEEecCCCEEEEEEC-CC----
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQD------RKVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCG-DN---- 211 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~--~~v~~v~~~~~g~~l~s~s~-D~---- 211 (271)
..+.|+|. |+..|+.++.+ ..|.++|..... ...+..+. ..+....|+|||+.|+..+. ++
T Consensus 191 ~~~~~sp~---dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (388)
T 3pe7_A 191 GHPIYRPY---DDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDR 264 (388)
T ss_dssp EEEEEETT---EEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCE
T ss_pred cccEECCC---CCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcc
Confidence 99999993 37777776653 378888876654 33344443 35778999999997766543 22
Q ss_pred cEEEEEeCCCCceeEEEEec
Q psy13856 212 SVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 212 ~v~iw~~~~~~~~~~~~~~~ 231 (271)
.|++||+.++ +...+..+.
T Consensus 265 ~l~~~d~~~g-~~~~l~~~~ 283 (388)
T 3pe7_A 265 FIYSADPETL-ENRQLTSMP 283 (388)
T ss_dssp EEEEECTTTC-CEEEEEEEC
T ss_pred eEEEEecCCC-ceEEEEcCC
Confidence 3999999865 333444443
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.34 E-value=3.9e-10 Score=93.67 Aligned_cols=185 Identities=9% Similarity=-0.009 Sum_probs=118.1
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeecccc--ccccccceEEEEcCCCCe--EEEEe-------------CCCcE
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSV--YLRRESNKAGALSPKLNR--SATSS-------------FHEAA 88 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~--~~~~~~i~~~~~s~~~~~--l~s~s-------------~d~~i 88 (271)
..|||++|++++.+ .|.+|++ +..+..+. +. +..++|+|+|++ ++++. .++.+
T Consensus 47 ~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v 121 (365)
T 1jof_A 47 FDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGH----PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYG 121 (365)
T ss_dssp ECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSS----GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEE
T ss_pred ECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCC----CccEEECCCCCEEEEEEecCCcceeccceeecCCceE
Confidence 45799999999887 9999997 11111221 22 556899999994 45553 68999
Q ss_pred EEEEeecCCCCceeecc---------ceeeEEEeeccceee------eEEEE--ee-CCceEEeEEec--CCCcceEEEE
Q psy13856 89 KHLGTVQSSSPACLQPK---------YFKLTVYSTKLTRIL------ILVRI--CG-GDKWIEETKLE--NHSDWVRDVA 148 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~------~~v~i--~~-~~~~~~~~~~~--~h~~~v~~v~ 148 (271)
++|++. ..+...... ......++.++++++ +.|.+ .. ++....+..+. .|...+..++
T Consensus 122 ~v~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 122 NVFSVS--ETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEC--TTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred EEEccC--CCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 999984 234332211 123455677787665 46766 33 45434344443 2456789999
Q ss_pred EccCCCCCCcEEEEEeC-CCeEEEEEcC--CCceee----eeeec----cCCC------CeEEEE-EecCCCEEEEEECC
Q psy13856 149 WAPSWGLSKCMIASCSQ-DRKVIIWTSN--DYVTWT----PFIMN----TFDD------VVWNVS-WSLTGDILTVSCGD 210 (271)
Q Consensus 149 ~~p~~~~~~~~l~s~~~-dg~i~iwd~~--~~~~~~----~~~~~----~h~~------~v~~v~-~~~~g~~l~s~s~D 210 (271)
|+| +++++++++. ++.+.+|++. +++... ...+. +|.. .+..++ |+|+|++|+++..+
T Consensus 200 ~sp----dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 200 MHP----TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp ECT----TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred ECC----CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 999 6888877765 7899999876 333210 11121 1222 588999 99999988877643
Q ss_pred -C-----cEEEEEeCCCCceeE
Q psy13856 211 -N-----SVSLWKENTDGAWQC 226 (271)
Q Consensus 211 -~-----~v~iw~~~~~~~~~~ 226 (271)
+ .|.+|+++..+....
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEE
T ss_pred CCCCCCCeEEEEEECCCCCEEE
Confidence 2 899999974444443
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.33 E-value=7.2e-12 Score=113.20 Aligned_cols=181 Identities=9% Similarity=-0.079 Sum_probs=115.8
Q ss_pred ecccCCCCCCCEEEEccC---------CCeEEeccc-eeee---ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEE
Q psy13856 26 TYTESPLRIGHTLISCDT---------QAHIGIRST-ISLL---QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLG 92 (271)
Q Consensus 26 ~~~~~~~~~g~~l~s~s~---------d~~i~lwd~-~~~~---~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d 92 (271)
......+|||++|++++. |+.|++||+ -... ..-... +..++|||||+.|+.++ ++.|++|+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~----~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP----IQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS----BCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc----cccceECCCCCEEEEEE-CCeEEEEe
Confidence 334445679999998876 799999998 1111 122244 78999999999999885 78999999
Q ss_pred eecCCCCceeecc--c---------------------eeeEEEeeccceee----e------------------------
Q psy13856 93 TVQSSSPACLQPK--Y---------------------FKLTVYSTKLTRIL----I------------------------ 121 (271)
Q Consensus 93 ~~~~~~~~~~~~~--~---------------------~~~~~~~~~~~~l~----~------------------------ 121 (271)
. .++.+.+.. . .....|+++++.++ .
T Consensus 137 ~---~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 137 R---PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp S---TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred C---CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 8 444433221 1 02567888888877 1
Q ss_pred -----------EEEE-ee-CCceE---Ee---EEecCCCcceEEEEEccCCCCCCcEEEEEeCC----CeEEEEE----c
Q psy13856 122 -----------LVRI-CG-GDKWI---EE---TKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWT----S 174 (271)
Q Consensus 122 -----------~v~i-~~-~~~~~---~~---~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d----g~i~iwd----~ 174 (271)
.+.+ .. .+... .+ ..+.+|...+.+++|+| |+.++++.... ..|.+|| .
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp----D~~~~~~~~~~~~~~~~l~~~d~~~~~ 289 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT----DERVCLQWLKRVQNVSVLSICDFREDW 289 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS----SSEEEEEEEESSTTEEEEEEEEECSSS
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC----CCeEEEEEeccccCeEEEEEEcccCCC
Confidence 3334 11 11100 00 11335778899999999 67777774432 3488899 6
Q ss_pred CCCceeeeeee----ccCCCCeE-----EEEEecCCCEEEE--EECCC--cEEEEEeCC
Q psy13856 175 NDYVTWTPFIM----NTFDDVVW-----NVSWSLTGDILTV--SCGDN--SVSLWKENT 220 (271)
Q Consensus 175 ~~~~~~~~~~~----~~h~~~v~-----~v~~~~~g~~l~s--~s~D~--~v~iw~~~~ 220 (271)
.+++. .... .+|...+. .+.|+|+|+.++. +..++ .|.+|++..
T Consensus 290 ~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 290 QTWDC--PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp SSEEC--CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred CCCce--EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 66553 2333 46666666 7899999986554 44555 455666543
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.29 E-value=8.3e-11 Score=106.76 Aligned_cols=177 Identities=9% Similarity=0.000 Sum_probs=115.5
Q ss_pred CCCCCEEEEccCC---------CeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 32 LRIGHTLISCDTQ---------AHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 32 ~~~g~~l~s~s~d---------~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
+|||+.|+.++.+ +.+.+||+ ...+..|... +...+|||||+.||.+ .|+.|++|+. .+
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~----~~~~~~SPdG~~la~~-~~~~i~~~~~---~~ 141 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNN----TQWVTWSPVGHKLAYV-WNNDIYVKIE---PN 141 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTT----EEEEEECSSTTCEEEE-ETTEEEEESS---TT
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCc----ceeeEECCCCCEEEEE-ECCeEEEEEC---CC
Confidence 6799999999887 45569998 4556667777 8999999999999888 5689999998 44
Q ss_pred Cceeecc--ce---------------------eeEEEeeccceee-e---------------------------------
Q psy13856 99 PACLQPK--YF---------------------KLTVYSTKLTRIL-I--------------------------------- 121 (271)
Q Consensus 99 ~~~~~~~--~~---------------------~~~~~~~~~~~l~-~--------------------------------- 121 (271)
+...+.. .. ....|+++++.++ .
T Consensus 142 ~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 4333221 10 1256788888776 1
Q ss_pred -------EEEE--eeC---CceEEeEEec------CCCcceEEEEEccCCCCCCcEEEEEeC----CCeEEEEEcCCCc-
Q psy13856 122 -------LVRI--CGG---DKWIEETKLE------NHSDWVRDVAWAPSWGLSKCMIASCSQ----DRKVIIWTSNDYV- 178 (271)
Q Consensus 122 -------~v~i--~~~---~~~~~~~~~~------~h~~~v~~v~~~p~~~~~~~~l~s~~~----dg~i~iwd~~~~~- 178 (271)
.+.+ ..+ +.......+. +|...+..++|+| |+++++.... +..|++||..+++
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp----dg~~~~~~~~r~~~~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT----QERISLQWLRRIQNYSVMDICDYDESSG 297 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE----TTEEEEEEEESSTTEEEEEEEEEETTTT
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC----CCeEEEEEeCCCCCEEEEEEEECCCCcc
Confidence 1222 111 1000111222 3677899999999 6886665432 3479999998876
Q ss_pred ---eeeeeee--ccCCCCeE-----EEEEecCCCEEE-EEEC-CC--cEEEEEeCC
Q psy13856 179 ---TWTPFIM--NTFDDVVW-----NVSWSLTGDILT-VSCG-DN--SVSLWKENT 220 (271)
Q Consensus 179 ---~~~~~~~--~~h~~~v~-----~v~~~~~g~~l~-s~s~-D~--~v~iw~~~~ 220 (271)
+.....+ .+|...|. ...|+|||+.++ ..+. +| .|++|+...
T Consensus 298 ~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 298 RWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred ccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 3112222 45665554 788999999877 6654 44 577777653
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.25 E-value=4.7e-09 Score=83.86 Aligned_cols=170 Identities=9% Similarity=0.071 Sum_probs=113.4
Q ss_pred CCCCEEEEccC-CCeEEeccc----eeeec-cccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-
Q psy13856 33 RIGHTLISCDT-QAHIGIRST----ISLLQ-GSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK- 105 (271)
Q Consensus 33 ~~g~~l~s~s~-d~~i~lwd~----~~~~~-~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~- 105 (271)
+++.++++... ++.|.+||. +..+. .+... +.+++++|+++.+++...++.|++|+. . +......
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~~~i~~~~~---~-g~~~~~~~ 158 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQH----PRGVTVDNKGRIIVVECKVMRVIIFDQ---N-GNVLHKFG 158 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSC----EEEEEECTTSCEEEEETTTTEEEEECT---T-SCEEEEEE
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCC----ceEEEEeCCCCEEEEECCCCEEEEEcC---C-CCEEEEeC
Confidence 46777776643 799999997 33332 22334 789999999998888778899999984 2 3333222
Q ss_pred -----cee-eEEEeeccceee-----eEEEE-eeCCceEEeEEecCC--CcceEEEEEccCCCCCCcEEEEEeCCC-eEE
Q psy13856 106 -----YFK-LTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENH--SDWVRDVAWAPSWGLSKCMIASCSQDR-KVI 170 (271)
Q Consensus 106 -----~~~-~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~~l~s~~~dg-~i~ 170 (271)
..+ ...+..+++.++ +.|.+ ...+ ..+..+..+ ...+.+++++| ++.++++...++ .|.
T Consensus 159 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~----~G~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 159 CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINS----NGEILIADNHNNFNLT 232 (286)
T ss_dssp CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECT----TCCEEEEECSSSCEEE
T ss_pred CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECC----CCCEEEEeCCCCEEEE
Confidence 112 233344455544 45666 4444 344455433 36788999999 688888888776 999
Q ss_pred EEEcCCCceeeeeeeccC--CCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 171 IWTSNDYVTWTPFIMNTF--DDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h--~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
+||.. ++. ...+..+ ...+.+++++|+|+++++ +.|+.|++|++..
T Consensus 233 ~~~~~-g~~--~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 233 IFTQD-GQL--ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EECTT-SCE--EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EECCC-CCE--EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 99964 333 3333333 234789999999987776 6799999999764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.20 E-value=4.7e-10 Score=100.33 Aligned_cols=149 Identities=9% Similarity=0.030 Sum_probs=98.1
Q ss_pred CCCCCE-EEEccC-CCeEEeccce-------eeecc-----ccccccccceEEEEcCCCCeEEEEeCC----------Cc
Q psy13856 32 LRIGHT-LISCDT-QAHIGIRSTI-------SLLQG-----SVYLRRESNKAGALSPKLNRSATSSFH----------EA 87 (271)
Q Consensus 32 ~~~g~~-l~s~s~-d~~i~lwd~~-------~~~~~-----h~~~~~~~i~~~~~s~~~~~l~s~s~d----------~~ 87 (271)
+|||+. |+..+. +..|.+++.- ..+.. |... +.+++|+|||+.|+.++.+ ..
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~----~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLR----WADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEE----EEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcc----ccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 478987 665543 5566666532 12333 4455 7899999999999998876 46
Q ss_pred EEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEec-CCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 88 AKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLE-NHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 88 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
|++|+. .....- ..+. ...+. .+...+..++|+| ||++|+.++.+
T Consensus 163 i~~~~~---~~~~~~------------------------~~~~---~~~l~~~~~~~~~~~~~Sp----DG~~la~~~~~ 208 (662)
T 3azo_A 163 LAAVPL---DGSAAA------------------------DRSA---VRELSDDAHRFVTGPRLSP----DGRQAVWLAWD 208 (662)
T ss_dssp EEEEET---TSTTTT------------------------CGGG---SEESSCSCSSEECCCEECT----TSSEEEEEEEC
T ss_pred EEEEEC---CCCccc------------------------cCCc---eeEEEecCCCcccCceECC----CCCEEEEEECC
Confidence 777776 210000 0011 12233 4556778899999 79999887755
Q ss_pred --------CeEEEEEcC-CCc--eeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 167 --------RKVIIWTSN-DYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 167 --------g~i~iwd~~-~~~--~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
..|++||+. ++. .. .....+|...+..+.|+|||+++++++.|+..+||.++
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~~-~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFADT-RTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEEE-EEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CCCCCCCCcEEEEEEECCCCccccc-EEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 379999998 452 21 33444567889999999999988888888844444443
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=1.4e-08 Score=83.06 Aligned_cols=172 Identities=8% Similarity=-0.023 Sum_probs=117.7
Q ss_pred CCCCCEEEEccCCCeEEeccc------eeee---------ccccccccccceEEEEcC-CCCeEEEEe-CCCcEEEEEee
Q psy13856 32 LRIGHTLISCDTQAHIGIRST------ISLL---------QGSVYLRRESNKAGALSP-KLNRSATSS-FHEAAKHLGTV 94 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~------~~~~---------~~h~~~~~~~i~~~~~s~-~~~~l~s~s-~d~~i~~~d~~ 94 (271)
.++|+++++...++.|++|+. +..+ .++-.. +.+++|+| +++.+++.+ .++.|++|+.
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~----P~~ia~~~~~g~lyv~d~~~~~~I~~~~~- 173 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ----PTDVAVEPSTGAVFVSDGYCNSRIVQFSP- 173 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS----EEEEEECTTTCCEEEEECSSCCEEEEECT-
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC----CcEEEEeCCCCeEEEEeCCCCCeEEEEcC-
Confidence 468999999999999999997 2222 122223 78999999 788888886 6899999983
Q ss_pred cCCCCceeeccc--------------eee-EEEeec-cceee-----eEEEE-eeC-CceEEeEEe--cCCCcceEEEEE
Q psy13856 95 QSSSPACLQPKY--------------FKL-TVYSTK-LTRIL-----ILVRI-CGG-DKWIEETKL--ENHSDWVRDVAW 149 (271)
Q Consensus 95 ~~~~~~~~~~~~--------------~~~-~~~~~~-~~~l~-----~~v~i-~~~-~~~~~~~~~--~~h~~~v~~v~~ 149 (271)
.+..+.... .+. ..+..+ +..++ +.|++ ... + +.+..+ ..+...+.++++
T Consensus 174 ---~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G--~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 174 ---SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK--EFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp ---TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEECCTTTTTCEEEEEE
T ss_pred ---CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC--cEEEEEeccccCCCcceeee
Confidence 333333221 122 233344 44444 56666 333 5 455555 346677889999
Q ss_pred ccCCCCCCcEEEEE-------eCCCeEEEEEcCCCceeeeeee---ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 150 APSWGLSKCMIASC-------SQDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 150 ~p~~~~~~~~l~s~-------~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+| +..+++. ..+..+++|+..+++. ...+ .++...+..++++|+|.++++...++.|++|++.
T Consensus 249 ~p-----g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 249 IP-----GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp ET-----TEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cC-----CEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 98 2333333 3455899999988875 4444 3566779999999999888888889999999986
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=1.6e-08 Score=81.26 Aligned_cols=171 Identities=11% Similarity=-0.068 Sum_probs=116.0
Q ss_pred CCCC-EEEEccCCCeEEeccc---eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccc--
Q psy13856 33 RIGH-TLISCDTQAHIGIRST---ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKY-- 106 (271)
Q Consensus 33 ~~g~-~l~s~s~d~~i~lwd~---~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~-- 106 (271)
++|+ +++++..++.|..|+. ...+..+... +.+++++|+|+++++...++.|.+|+. .+++......
T Consensus 37 ~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~l~~~~dg~l~v~~~~~~~i~~~d~---~~g~~~~~~~~~ 109 (296)
T 3e5z_A 37 PARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHH----QNGHCLNKQGHLIACSHGLRRLERQRE---PGGEWESIADSF 109 (296)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSS----EEEEEECTTCCEEEEETTTTEEEEECS---TTCCEEEEECEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCC----cceeeECCCCcEEEEecCCCeEEEEcC---CCCcEEEEeecc
Confidence 5887 7888888999999998 4455556666 889999999998877777789999997 4554432210
Q ss_pred -------eeeEEEeeccceee-----e-----------------EEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCC
Q psy13856 107 -------FKLTVYSTKLTRIL-----I-----------------LVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLS 156 (271)
Q Consensus 107 -------~~~~~~~~~~~~l~-----~-----------------~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 156 (271)
.....+..+++.++ + .+.. ...+. ...+..+......++|+| +
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~---~~~~~~~~~~~~gi~~s~----d 182 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT---LSAPIRDRVKPNGLAFLP----S 182 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC---EEEEECCCSSEEEEEECT----T
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC---EEEeecCCCCCccEEECC----C
Confidence 11233444455444 1 2222 22232 233344566778999999 6
Q ss_pred CcEEEEEeCCCeEEEEEcC-CCce-eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 157 KCMIASCSQDRKVIIWTSN-DYVT-WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~-~~~~-~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+..+++.+.++.|.+|++. ++.. .....+..+...+..++++++|+++++. ++.|.+|+.+
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 8888888888999999997 3332 1112233345567789999999977666 7889999976
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.14 E-value=1e-08 Score=81.88 Aligned_cols=168 Identities=10% Similarity=-0.050 Sum_probs=112.9
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeecccc-ccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSV-YLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~-~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
.+++|++++.|+.|.+||. +..+..+. .. +.+++++|+|+.++ +.++.|+.||. +++.+.....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~----~~~~~~~pdG~ilv--s~~~~V~~~d~----~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE----CNSVAATKAGEILF--SYSKGAKMITR----DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCC----CCEEEECTTSCEEE--ECBSEEEEECT----TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCC----CcCeEECCCCCEEE--eCCCCEEEECC----CCCEEEEEcC
Confidence 3678999999999999998 44455444 34 78999999999888 34667777774 3444433321
Q ss_pred ------eeEEEeeccceee---e---EEEE-eeCCceEEeEEec------CCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 108 ------KLTVYSTKLTRIL---I---LVRI-CGGDKWIEETKLE------NHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 108 ------~~~~~~~~~~~l~---~---~v~i-~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
.......+++.++ + .+.. ..++ +.+..+. .+......++..+ ++.++++...++.
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G--k~l~~~~~~~~~~~~~~~~~~v~~~~----~G~~lv~~~~~~~ 147 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKG--EVLSKTEFETGIERPHAQFRQINKNK----KGNYLVPLFATSE 147 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTS--CEEEEEEECCSCSSGGGSCSCCEECT----TSCEEEEETTTTE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeCCC--CEEEEEeccCCCCcccccccCceECC----CCCEEEEecCCCE
Confidence 1122334455555 2 2222 3455 3333332 2223455667777 6999999999999
Q ss_pred EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 169 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 169 i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
|..||.. ++. ...+... ....++.+.++|.++++++.++.|..+|..++
T Consensus 148 v~~~d~~-G~~--~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 148 VREIAPN-GQL--LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp EEEECTT-SCE--EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred EEEECCC-CCE--EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 9999988 664 3344433 45667888899999999998889999998876
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.14 E-value=1.3e-09 Score=97.44 Aligned_cols=149 Identities=11% Similarity=0.040 Sum_probs=101.8
Q ss_pred ccCCCCCCCEEEEccCC----------CeEEeccc-e---------eeec-cccccccccceEEEEcCCCCeEEEEeCCC
Q psy13856 28 TESPLRIGHTLISCDTQ----------AHIGIRST-I---------SLLQ-GSVYLRRESNKAGALSPKLNRSATSSFHE 86 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d----------~~i~lwd~-~---------~~~~-~h~~~~~~~i~~~~~s~~~~~l~s~s~d~ 86 (271)
.....|||+.|++++.| ..|.+||+ - ..+. .+... +..++|||||++|+.++.++
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRF----VTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSE----ECCCEECTTSSEEEEEEECT
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCc----ccCceECCCCCEEEEEECCC
Confidence 33445799999999877 58889987 2 2233 44445 77899999999999887553
Q ss_pred --------cEEEEEeecCC-CCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCC
Q psy13856 87 --------AAKHLGTVQSS-SPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSK 157 (271)
Q Consensus 87 --------~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~ 157 (271)
.|++|++ . ++... .......+|...+..+.|+| |+
T Consensus 210 ~~~~~~~~~i~~~d~---~~~g~~~-----------------------------~~~~l~~~~~~~~~~~~~sp----dg 253 (662)
T 3azo_A 210 PRMPWEGTELKTARV---TEDGRFA-----------------------------DTRTLLGGPEEAIAQAEWAP----DG 253 (662)
T ss_dssp TCCTTTCEEEEEEEE---CTTSCEE-----------------------------EEEEEEEETTBCEEEEEECT----TS
T ss_pred CCCCCCCcEEEEEEE---CCCCccc-----------------------------ccEEeCCCCCceEcceEECC----CC
Confidence 6778887 2 12100 11222234567889999999 68
Q ss_pred cEEEEEeCCC--eEEEEEcCCCceeeeeeeccCCCC--------eEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 158 CMIASCSQDR--KVIIWTSNDYVTWTPFIMNTFDDV--------VWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 158 ~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~h~~~--------v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
++++++..++ .|.+||..+++. ......+... +..++|+|++.++++++. +.++||.++
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAA--TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCE--EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eEEEEECCCCCeEEEEEECCCCce--eecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 8888888888 566666655543 2222323222 567899999999999998 999999654
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.13 E-value=2.4e-08 Score=79.69 Aligned_cols=171 Identities=11% Similarity=0.048 Sum_probs=114.7
Q ss_pred CCCCCEEEEccCCCeEEeccc----eeeec------cccccccccceEEEE-cCCCCeEEEEeC-CCcEEEEEeecCCCC
Q psy13856 32 LRIGHTLISCDTQAHIGIRST----ISLLQ------GSVYLRRESNKAGAL-SPKLNRSATSSF-HEAAKHLGTVQSSSP 99 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~----~~~~~------~h~~~~~~~i~~~~~-s~~~~~l~s~s~-d~~i~~~d~~~~~~~ 99 (271)
.++|.++++...++.|.+||. +..+. ++... +.++++ .++++.+++... ++.|++|+. ++
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~----p~~i~~~~~~g~l~v~~~~~~~~i~~~d~----~g 109 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLY----PNRVAVVRNSGDIIVTERSPTHQIQIYNQ----YG 109 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSS----EEEEEEETTTTEEEEEECGGGCEEEEECT----TS
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccC----ceEEEEEcCCCeEEEEcCCCCCEEEEECC----CC
Confidence 468898998888899999997 23332 12234 789999 467766666543 889989983 23
Q ss_pred ceeecc-----cee-eEEEeeccceee-----eEEEE-eeCCceEEeEEec--CCCcceEEEEEccCCCCCCcEEEEEeC
Q psy13856 100 ACLQPK-----YFK-LTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLE--NHSDWVRDVAWAPSWGLSKCMIASCSQ 165 (271)
Q Consensus 100 ~~~~~~-----~~~-~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~~~~l~s~~~ 165 (271)
..+... ..+ ...+..+++.++ +.|.+ ...+ .....+. ++...+.+++++| ++.++++...
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~----~g~l~v~~~~ 183 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVND----KQEIFISDNR 183 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS--CEEEEEECTTTCSSEEEEEECS----SSEEEEEEGG
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECC----CCCEEEEECC
Confidence 333322 122 233344565554 45555 4344 3334442 4456789999999 6888888888
Q ss_pred CCeEEEEEcCCCceeeeeeecc--CCCCeEEEEEecCCCEEEEEECCC-cEEEEEeC
Q psy13856 166 DRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDN-SVSLWKEN 219 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~-~v~iw~~~ 219 (271)
++.|++||... .. ...+.. +...+..++++++|.++++...++ .|.+|+.+
T Consensus 184 ~~~i~~~~~~g-~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 184 AHCVKVFNYEG-QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GTEEEEEETTC-CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCEEEEEcCCC-CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 99999999754 32 333432 336789999999999888888776 99999954
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.13 E-value=3.7e-09 Score=88.04 Aligned_cols=181 Identities=8% Similarity=-0.018 Sum_probs=110.0
Q ss_pred ccCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEE--EEcCCCCeEEEE------------------
Q psy13856 28 TESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAG--ALSPKLNRSATS------------------ 82 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~--~~s~~~~~l~s~------------------ 82 (271)
.....|||+.|+.++.++.|.+||+ ...+..+... +... .++|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW----VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE----EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc----ccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 3455689999999999999999998 2334444444 4333 358999988743
Q ss_pred ----eCCCcEEEEEeecCCCCceeecc----ceeeEEEee-ccceee----e-------EEEE-eeCCceEEeEEecCCC
Q psy13856 83 ----SFHEAAKHLGTVQSSSPACLQPK----YFKLTVYST-KLTRIL----I-------LVRI-CGGDKWIEETKLENHS 141 (271)
Q Consensus 83 ----s~d~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~-~~~~l~----~-------~v~i-~~~~~~~~~~~~~~h~ 141 (271)
..+..|.+||+ .+++..... ......+++ +++.++ + .+.+ ...+ .....+..+.
T Consensus 161 ~~~~~~~~~l~~~d~---~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~ 235 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDL---KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHA 235 (388)
T ss_dssp HGGGCCCEEEEEEET---TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCC
T ss_pred hhccCCcceEEEEEC---CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCC
Confidence 24467888887 555443332 234556777 777765 1 3333 2222 2233444444
Q ss_pred --cceEEEEEccCCCCCCcEEEEEeC-C----CeEEEEEcCCCceeeeeeeccCCCC---eEEEEEecCCCEEEEE----
Q psy13856 142 --DWVRDVAWAPSWGLSKCMIASCSQ-D----RKVIIWTSNDYVTWTPFIMNTFDDV---VWNVSWSLTGDILTVS---- 207 (271)
Q Consensus 142 --~~v~~v~~~p~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~h~~~---v~~v~~~~~g~~l~s~---- 207 (271)
..+....|+| |++.|+..+. + ..|++||+.+++...+..+.++... ...+.|+|+|+.|+..
T Consensus 236 ~~~~~~~~~~sp----dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 236 EGESCTHEFWVP----DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp TTEEEEEEEECT----TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred CCcccccceECC----CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 3578899999 6886655443 2 2499999998774222233321100 1123699999887754
Q ss_pred -----ECCCcEEEEEeCCC
Q psy13856 208 -----CGDNSVSLWKENTD 221 (271)
Q Consensus 208 -----s~D~~v~iw~~~~~ 221 (271)
..+..|++||+.++
T Consensus 312 ~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp -----CCCCEEEEEETTTT
T ss_pred cccccCCCCEEEEEeccCC
Confidence 44668999998864
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.12 E-value=1.2e-08 Score=83.43 Aligned_cols=186 Identities=9% Similarity=-0.024 Sum_probs=118.5
Q ss_pred cCCCCCCCEEEEccCC------------------------CeEEeccc-----eeeec-cccccccccceEEEEcCCCCe
Q psy13856 29 ESPLRIGHTLISCDTQ------------------------AHIGIRST-----ISLLQ-GSVYLRRESNKAGALSPKLNR 78 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d------------------------~~i~lwd~-----~~~~~-~h~~~~~~~i~~~~~s~~~~~ 78 (271)
....++|+++++.+.+ +.|.+||. +..+. ++-.. +.+++++|+|++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~----p~gia~d~~g~l 104 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYL----PHGLSIDTDGNY 104 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSS----EEEEEECTTSCE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCC----ceEEEECCCCCE
Confidence 3344689988888877 47899987 22221 22234 789999999998
Q ss_pred EEEEeCCCcEEEEEeecCCCCc-eeecc-------------ceee-EEEee-ccceee------eEEEE-eeCCceEEeE
Q psy13856 79 SATSSFHEAAKHLGTVQSSSPA-CLQPK-------------YFKL-TVYST-KLTRIL------ILVRI-CGGDKWIEET 135 (271)
Q Consensus 79 l~s~s~d~~i~~~d~~~~~~~~-~~~~~-------------~~~~-~~~~~-~~~~l~------~~v~i-~~~~~~~~~~ 135 (271)
+++...++.|+.|+. .... .+... ..+. ..+.. .+..++ +.|.+ ..++ ..+.
T Consensus 105 ~v~d~~~~~v~~~~~---~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g--~~~~ 179 (329)
T 3fvz_A 105 WVTDVALHQVFKLDP---HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG--KFVT 179 (329)
T ss_dssp EEEETTTTEEEEECT---TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS--CEEE
T ss_pred EEEECCCCEEEEEeC---CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC--CEEE
Confidence 888888999999996 2211 22111 1232 33333 344444 34544 4444 3444
Q ss_pred EecC----------CCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee--ccCCCCeEEEEEec----
Q psy13856 136 KLEN----------HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM--NTFDDVVWNVSWSL---- 199 (271)
Q Consensus 136 ~~~~----------h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~h~~~v~~v~~~~---- 199 (271)
.+.. +-.....|+++|. .+.++++...++.|++|+..+++. ...+ ..+...+..++|+|
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPH---LDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETT---TTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTTCEEEEEEETTEEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECC---CCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCCCcceeeecCCEEE
Confidence 4421 2234789999993 378888888999999999987765 3333 45667889999999
Q ss_pred --CCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 200 --TGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 200 --~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+|...++...+..|++|++.++ +.+..+.
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g---~~~~~~~ 285 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSG---EIIDVFK 285 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTC---CEEEEEC
T ss_pred EeCCCEEeccCCCcEEEEEEcCCC---eEEEEEc
Confidence 3333333334558999998877 4444543
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.10 E-value=1.2e-08 Score=84.74 Aligned_cols=74 Identities=5% Similarity=0.056 Sum_probs=55.7
Q ss_pred EEEccCCCCCCcEEEEEeC-----------CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy13856 147 VAWAPSWGLSKCMIASCSQ-----------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 215 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~i 215 (271)
++++| ++..+..+.. .+.|.+||..+.+. ...+..+. +..++|+|+|++|++++. ++|.+
T Consensus 259 ~a~~~----dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v 329 (361)
T 2oiz_A 259 VGLHR----ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNV 329 (361)
T ss_dssp EEEET----TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEEECTT--CCEEEEETTTTEEEEECS-SCEEE
T ss_pred EEEec----CCCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEE
Confidence 67888 5555554432 35899999998875 56666665 899999999999998887 99999
Q ss_pred EEeCCCCceeEEEEe
Q psy13856 216 WKENTDGAWQCITEM 230 (271)
Q Consensus 216 w~~~~~~~~~~~~~~ 230 (271)
||..++ ..+.+.++
T Consensus 330 ~D~~t~-~l~~~~~i 343 (361)
T 2oiz_A 330 YDISQP-EPKLLRTI 343 (361)
T ss_dssp EECSSS-SCEEEEEE
T ss_pred EECCCC-cceeeEEe
Confidence 998753 33566665
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.09 E-value=4.1e-09 Score=87.76 Aligned_cols=135 Identities=9% Similarity=-0.068 Sum_probs=96.5
Q ss_pred CCCCEEEEccCCCeEEeccc--eee--------ecc-ccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 33 RIGHTLISCDTQAHIGIRST--ISL--------LQG-SVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~--~~~--------~~~-h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
+...++++|+.| .+++|++ +.. +.. ....... |+.++| |++.|+++ .++.|++||.. +..
T Consensus 47 ~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~---sl~- 117 (388)
T 1xip_A 47 NSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE---ELS- 117 (388)
T ss_dssp TTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS---STT-
T ss_pred CCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch---hhh-
Confidence 467788888886 5666987 220 111 1111112 889999 88999998 88999999983 211
Q ss_pred eeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceee
Q psy13856 102 LQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT 181 (271)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 181 (271)
.......|...+.++.+.+. . ++++..||.+.+||+.++..
T Consensus 118 -------------------------------~~~~~~~~~~~v~~i~~~~p-----~-~av~~~dG~L~v~dl~~~~~-- 158 (388)
T 1xip_A 118 -------------------------------EFRTVTSFEKPVFQLKNVNN-----T-LVILNSVNDLSALDLRTKST-- 158 (388)
T ss_dssp -------------------------------CEEEEEECSSCEEEEEECSS-----E-EEEEETTSEEEEEETTTCCE--
T ss_pred -------------------------------ccCccceeecceeeEEecCC-----C-EEEEECCCCEEEEEccCCcc--
Confidence 11122345566778877762 2 88899999999999997664
Q ss_pred eeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 182 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.. +...|.|++|+|+| ++.|..||++++|+++..
T Consensus 159 ~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 159 KQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred cc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 22 45689999999999 778999999999998765
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.09 E-value=4.2e-09 Score=94.92 Aligned_cols=156 Identities=5% Similarity=-0.127 Sum_probs=101.8
Q ss_pred ecccCCCCCCCEEE-----EccCCCeEEeccc--eeee-ccccccccccceEEEEcCCCCeEEEEeCCCc----------
Q psy13856 26 TYTESPLRIGHTLI-----SCDTQAHIGIRST--ISLL-QGSVYLRRESNKAGALSPKLNRSATSSFHEA---------- 87 (271)
Q Consensus 26 ~~~~~~~~~g~~l~-----s~s~d~~i~lwd~--~~~~-~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~---------- 87 (271)
......+|||++|| .|+.+..|++||+ -..+ ..+... .....++|+|||+.|+.++.|..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 34445568999999 7777889999999 2222 223222 00268899999999999988776
Q ss_pred ---EEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 88 ---AKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 88 ---i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
|++|++ .++... . ..+.....|...+.++.|+| ||++|+..+
T Consensus 201 ~~~v~~~~l---~t~~~~--------------------------~--~lv~~~~~~~~~~~~~~~Sp----DG~~l~~~~ 245 (695)
T 2bkl_A 201 YTTIRYHTL---GTEPSK--------------------------D--TVVHERTGDPTTFLQSDLSR----DGKYLFVYI 245 (695)
T ss_dssp GCEEEEEET---TSCGGG--------------------------C--EEEECCCCCTTCEEEEEECT----TSCCEEEEE
T ss_pred CCEEEEEEC---CCCchh--------------------------c--eEEEecCCCCEEEEEEEECC----CCCEEEEEE
Confidence 888876 222210 0 23333345667888999999 788888777
Q ss_pred CCC----eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE---CCCcEEEEEeCCCC
Q psy13856 165 QDR----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC---GDNSVSLWKENTDG 222 (271)
Q Consensus 165 ~dg----~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s---~D~~v~iw~~~~~~ 222 (271)
.++ .|.+|+...+. ...+..+...+....| ++|.+++.+. .++.|.+|+++++.
T Consensus 246 ~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 246 LRGWSENDVYWKRPGEKD---FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EETTTEEEEEEECTTCSS---CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred eCCCCceEEEEEcCCCCc---eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 665 66677654444 3444455556666666 5666444444 25789999987653
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.07 E-value=1.2e-07 Score=83.08 Aligned_cols=179 Identities=8% Similarity=0.020 Sum_probs=123.1
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc--
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-- 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-- 105 (271)
+.+.++++...++.|.++|. +..+... .. +..++|+|||+++++++.|+.|.+||+.. .+.+.+...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~----p~~v~~SpDGr~lyv~~~dg~V~viD~~~-~t~~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YA----VHISRLSASGRYLFVIGRDGKVNMIDLWM-KEPTTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SC----EEEEEECTTSCEEEEEETTSEEEEEETTS-SSCCEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CC----ccceEECCCCCEEEEEcCCCeEEEEECCC-CCCcEeEEEec
Confidence 35567888899999999998 3334322 23 56899999999999999999999999820 144454443
Q ss_pred -cee-eEEEe----eccceee------eEEEEeeCCceEEeEEecC----------CCc-ceEEEEEccCCCCCCcEEEE
Q psy13856 106 -YFK-LTVYS----TKLTRIL------ILVRICGGDKWIEETKLEN----------HSD-WVRDVAWAPSWGLSKCMIAS 162 (271)
Q Consensus 106 -~~~-~~~~~----~~~~~l~------~~v~i~~~~~~~~~~~~~~----------h~~-~v~~v~~~p~~~~~~~~l~s 162 (271)
..+ ...++ ++++++. +.+.+.+....+.+..+.. |.. .+..+..++. ...++++
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~---~~~~vv~ 315 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY---RPEFIVN 315 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS---SSEEEEE
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC---CCEEEEE
Confidence 222 33455 4777766 6666633333355554432 222 5778888885 4567777
Q ss_pred EeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCC
Q psy13856 163 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTD 221 (271)
Q Consensus 163 ~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~ 221 (271)
...+|.|.++|...........+ ........+.|+|+|++++++. .+++|.++|..++
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 77789999999987654322222 2344677899999999987766 5789999999876
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.07 E-value=5.9e-09 Score=86.87 Aligned_cols=180 Identities=7% Similarity=-0.017 Sum_probs=108.2
Q ss_pred cccCCCCCCCEEEEccCC---CeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCC
Q psy13856 27 YTESPLRIGHTLISCDTQ---AHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSP 99 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d---~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~ 99 (271)
......|||+.|+....+ ..|.+||. ...+..+... ....+.|+|||+.|+.++.++.+++|+. ..+
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~---~~~~~~~spdg~~l~~~~~~~~l~~~d~---~~~ 112 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD---NTFGGFISTDERAFFYVKNELNLMKVDL---ETL 112 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB---CTTTCEECTTSSEEEEEETTTEEEEEET---TTC
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC---ccccceECCCCCEEEEEEcCCcEEEEEC---CCC
Confidence 344556899987766432 46777787 2233333222 0334789999999999999999999997 444
Q ss_pred ceeeccce-----ee--E-----------------EEeeccceee----------eEEEE--eeCCceEEeEEecCCCcc
Q psy13856 100 ACLQPKYF-----KL--T-----------------VYSTKLTRIL----------ILVRI--CGGDKWIEETKLENHSDW 143 (271)
Q Consensus 100 ~~~~~~~~-----~~--~-----------------~~~~~~~~l~----------~~v~i--~~~~~~~~~~~~~~h~~~ 143 (271)
+....... +. . .++++++.++ ..+.+ ...+. . ..+..+...
T Consensus 113 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--~-~~~~~~~~~ 189 (396)
T 3c5m_A 113 EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--L-EVIHQDTAW 189 (396)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--E-EEEEEESSC
T ss_pred CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--E-EeeccCCcc
Confidence 43322210 11 0 1122222221 34444 22332 2 222346677
Q ss_pred eEEEEEccCCCCCCcEEEEEeCC------CeEEEEEcCCCceeeeeeeccC--CCCeEEEEEecCCCEEEEEECC-----
Q psy13856 144 VRDVAWAPSWGLSKCMIASCSQD------RKVIIWTSNDYVTWTPFIMNTF--DDVVWNVSWSLTGDILTVSCGD----- 210 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h--~~~v~~v~~~~~g~~l~s~s~D----- 210 (271)
+..+.|+|. ++..|+..+.+ ..|.+||...... ..+..+ ...+..++|+|+|+.|+.++.+
T Consensus 190 ~~~~~~sp~---dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 190 LGHPIYRPF---DDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp EEEEEEETT---EEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred cccceECCC---CCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 889999994 36666665543 4688888876542 223323 2357889999999987777654
Q ss_pred CcEEEEEeCCC
Q psy13856 211 NSVSLWKENTD 221 (271)
Q Consensus 211 ~~v~iw~~~~~ 221 (271)
+.|++||+.++
T Consensus 264 ~~l~~~d~~~g 274 (396)
T 3c5m_A 264 RVIYKANPETL 274 (396)
T ss_dssp EEEEEECTTTC
T ss_pred ceEEEEECCCC
Confidence 44999998754
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.04 E-value=1.7e-08 Score=91.23 Aligned_cols=154 Identities=5% Similarity=-0.109 Sum_probs=100.9
Q ss_pred ccCCCCCCCEEEEccCCC-----eEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCc-----------
Q psy13856 28 TESPLRIGHTLISCDTQA-----HIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEA----------- 87 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~-----~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~----------- 87 (271)
....+|||++||.++.++ .|++||+ .......... +.+++|+|||+.|+.++.++.
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~----~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK----FSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC----SCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcc----cceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 344567999988765543 8999998 1111111222 568999999999999887765
Q ss_pred -----EEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEE
Q psy13856 88 -----AKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 162 (271)
Q Consensus 88 -----i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s 162 (271)
|++|++ .++.... ..+.....|...+..+.|+| |+++|+.
T Consensus 205 ~~~~~v~~~~l---~t~~~~~----------------------------~~v~~~~~~~~~~~~~~~Sp----Dg~~l~~ 249 (710)
T 2xdw_A 205 NLHQKLYYHVL---GTDQSED----------------------------ILCAEFPDEPKWMGGAELSD----DGRYVLL 249 (710)
T ss_dssp CCCCEEEEEET---TSCGGGC----------------------------EEEECCTTCTTCEEEEEECT----TSCEEEE
T ss_pred CCCCEEEEEEC---CCCcccc----------------------------eEEeccCCCCeEEEEEEEcC----CCCEEEE
Confidence 667776 2222100 12222233556688999999 7888887
Q ss_pred EeC-----CCeEEEEEcCC------CceeeeeeeccCCCCeEEEEEecCCCEEEEEECC----CcEEEEEeCCCC
Q psy13856 163 CSQ-----DRKVIIWTSND------YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWKENTDG 222 (271)
Q Consensus 163 ~~~-----dg~i~iwd~~~------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D----~~v~iw~~~~~~ 222 (271)
.+. +..|++||+.+ +.. ....+..+...+.. .|+|+|..|+..+.+ +.|.+|++.+..
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 765 67899999976 421 14445556555554 488999887776653 369999987653
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.02 E-value=7.3e-08 Score=76.03 Aligned_cols=174 Identities=7% Similarity=-0.069 Sum_probs=112.7
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeec-cccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc--
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQ-GSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK-- 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~-~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~-- 105 (271)
++|.++++.. ++.|.+||. ...+. ..... +.+++++++++.+++...++.|.+|+. .+.......
T Consensus 76 ~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~----p~~i~~~~~g~l~v~~~~~~~i~~~~~---~~~~~~~~~~~ 147 (270)
T 1rwi_B 76 GAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNY----PEGLAVDTQGAVYVADRGNNRVVKLAA---GSKTQTVLPFT 147 (270)
T ss_dssp TTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSS----EEEEEECTTCCEEEEEGGGTEEEEECT---TCCSCEECCCC
T ss_pred CCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCC----CcceEECCCCCEEEEECCCCEEEEEEC---CCceeEeeccc
Confidence 5788777766 789999997 22222 12234 789999999998777777888988865 332222111
Q ss_pred --ce-eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCC
Q psy13856 106 --YF-KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 176 (271)
Q Consensus 106 --~~-~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 176 (271)
.. ....+..+++.++ +.|.+ ...+. ........+...+.++++++ ++.++++...++.|.+|+...
T Consensus 148 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~----~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQVVLPFTDITAPWGIAVDE----AGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-CEEECCCSSCCSEEEEEECT----TCCEEEEETTTSCEEEECTTC
T ss_pred cCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-ceEeecccCCCCceEEEECC----CCCEEEEECCCCcEEEEcCCC
Confidence 11 2233344455444 34554 22221 12222223336688999999 578888887889999999876
Q ss_pred CceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 177 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 177 ~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
... ......+...+.+++++++|+++++...++.|+++++...
T Consensus 223 ~~~--~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 223 TTS--TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCC--EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred Ccc--eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 442 2222233357899999999998888888999999998754
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.99 E-value=6.5e-09 Score=86.61 Aligned_cols=173 Identities=7% Similarity=-0.010 Sum_probs=105.3
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceE-------------------EEEcCCCCeEEEE----
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKA-------------------GALSPKLNRSATS---- 82 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~-------------------~~~s~~~~~l~s~---- 82 (271)
..|||+.|+.++.++.|.+||. ......+... ... ++|+|+++.++.+
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~----~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEW----KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE----EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccccc----CCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 4679999999999899999998 2222323332 222 3567888766544
Q ss_pred -eCCCcEEEEEeecCCCCceeecc----ceeeEEEee-ccceee-----------eEEEE-eeCCceEEeEEecCC--Cc
Q psy13856 83 -SFHEAAKHLGTVQSSSPACLQPK----YFKLTVYST-KLTRIL-----------ILVRI-CGGDKWIEETKLENH--SD 142 (271)
Q Consensus 83 -s~d~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~-~~~~l~-----------~~v~i-~~~~~~~~~~~~~~h--~~ 142 (271)
..+..|++||. .+++..... ......++. +++.++ ..+.+ ...+ .....+..+ ..
T Consensus 164 ~~~~~~l~~~d~---~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~ 238 (396)
T 3c5m_A 164 TNPTCRLIKVDI---ETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG--SNVRKIKEHAEGE 238 (396)
T ss_dssp TCCCEEEEEEET---TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS--CCCEESSCCCTTE
T ss_pred CCCcceEEEEEC---CCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC--CceeEeeccCCCc
Confidence 35667888887 555443322 123445555 455444 02333 2222 122233333 23
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEec-CCCEEEEEE--------
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSC-------- 208 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s-------- 208 (271)
.+..+.|+| ++.+|+.++.+ +.|++||+.++... .+..... .. +.|+| +|+++++++
T Consensus 239 ~~~~~~~sp----dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~---~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 239 SCTHEFWIP----DGSAMAYVSYFKGQTDRVIYKANPETLENE---EVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVA 309 (396)
T ss_dssp EEEEEEECT----TSSCEEEEEEETTTCCEEEEEECTTTCCEE---EEEECCS-EE-EEEECSSSSEEEEEECCC-----
T ss_pred cccceEECC----CCCEEEEEecCCCCccceEEEEECCCCCeE---EeeeCCC-CC-CCccCCCCceEEEecCCcceeec
Confidence 578899999 68877766544 55999999887642 2221222 23 89999 999888765
Q ss_pred --------CCCcEEEEEeCCC
Q psy13856 209 --------GDNSVSLWKENTD 221 (271)
Q Consensus 209 --------~D~~v~iw~~~~~ 221 (271)
.+..|++||+.++
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp -----CCCCCCEEEEEETTTT
T ss_pred cccccccCCCCcEEEEecccC
Confidence 3478999998754
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=5.1e-08 Score=79.52 Aligned_cols=145 Identities=9% Similarity=-0.101 Sum_probs=97.1
Q ss_pred CCCCEEEEccCCCeEEeccc----eeee-ccccccccccceEEEEcCCCCeEEEEeCC----CcEEEEEeecCCCCceee
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLL-QGSVYLRRESNKAGALSPKLNRSATSSFH----EAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~-~~h~~~~~~~i~~~~~s~~~~~l~s~s~d----~~i~~~d~~~~~~~~~~~ 103 (271)
++|++++++..++.|.+||. ...+ ..+... +.+++++|+++++++...+ +.|.+|+. ..+..
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~---~~~~~-- 124 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKAN----PAAIKIHKDGRLFVCYLGDFKSTGGIFAATE---NGDNL-- 124 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSS----EEEEEECTTSCEEEEECTTSSSCCEEEEECT---TSCSC--
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC----cceEEECCCCcEEEEeCCCCCCCceEEEEeC---CCCEE--
Confidence 68898888888899999998 2222 244555 8999999999887777666 67888886 22211
Q ss_pred ccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC------CCeEEEEEcCCC
Q psy13856 104 PKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ------DRKVIIWTSNDY 177 (271)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~------dg~i~iwd~~~~ 177 (271)
.....-..+...+.++.++| ++.++++... .+.|..+|...+
T Consensus 125 ----------------------------~~~~~~~~~~~~~~~i~~d~----~g~l~v~~~~~~~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 125 ----------------------------QDIIEDLSTAYCIDDMVFDS----KGGFYFTDFRGYSTNPLGGVYYVSPDFR 172 (333)
T ss_dssp ----------------------------EEEECSSSSCCCEEEEEECT----TSCEEEEECCCBTTBCCEEEEEECTTSC
T ss_pred ----------------------------EEEEccCccCCcccceEECC----CCCEEEEeccccccCCCceEEEEeCCCC
Confidence 10000012345788999999 5887777654 355666665544
Q ss_pred ceeeeeeeccCCCCeEEEEEecCCCEEEEE-ECCCcEEEEEeCCC
Q psy13856 178 VTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENTD 221 (271)
Q Consensus 178 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~~~~~ 221 (271)
.. ..+......+..++|+|+|+.|+.+ +.++.|.+|+++..
T Consensus 173 ~~---~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~ 214 (333)
T 2dg1_A 173 TV---TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 214 (333)
T ss_dssp CE---EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred EE---EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCC
Confidence 42 2222233457889999999866544 45789999999643
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.93 E-value=1.8e-07 Score=84.53 Aligned_cols=184 Identities=9% Similarity=-0.163 Sum_probs=114.7
Q ss_pred cCCCCCCCEEEEccCCCe----------------EEeccc---e----eeecc--ccccccccceEEEEcCCCCeEEEEe
Q psy13856 29 ESPLRIGHTLISCDTQAH----------------IGIRST---I----SLLQG--SVYLRRESNKAGALSPKLNRSATSS 83 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~----------------i~lwd~---~----~~~~~--h~~~~~~~i~~~~~s~~~~~l~s~s 83 (271)
....|||+.|+.++.|+. |.+|++ . ..+.. |... +..++|+|||++|+..+
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~----~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW----MGGAELSDDGRYVLLSI 251 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC----EEEEEECTTSCEEEEEE
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE----EEEEEEcCCCCEEEEEE
Confidence 445679999998887766 999988 1 11122 3444 67899999999888776
Q ss_pred C-----CCcEEEEEeec------CC-CCceeecc-ceeeEEEeeccceee---------eEEEE-e-eCCceEEeEEecC
Q psy13856 84 F-----HEAAKHLGTVQ------SS-SPACLQPK-YFKLTVYSTKLTRIL---------ILVRI-C-GGDKWIEETKLEN 139 (271)
Q Consensus 84 ~-----d~~i~~~d~~~------~~-~~~~~~~~-~~~~~~~~~~~~~l~---------~~v~i-~-~~~~~~~~~~~~~ 139 (271)
. +..+++||... +. ....+... ......++.+++.++ ..+.+ . ..+.....+.+..
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 4 56888999842 11 11111111 112234556666554 23444 2 2221001233444
Q ss_pred CCc--ceEEEEEccCCCCCCcEEEEEeCCCe--EEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEE-EC---CC
Q psy13856 140 HSD--WVRDVAWAPSWGLSKCMIASCSQDRK--VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CG---DN 211 (271)
Q Consensus 140 h~~--~v~~v~~~p~~~~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~---D~ 211 (271)
|.. .+..+.|++ ++.++++...|+. |.+|++.++.. ...+..+.+.+..++++|++..++.. +. .+
T Consensus 332 ~~~~~~~~~~~~~~----~~~lv~~~~~~g~~~l~~~~~~~g~~--~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 405 (710)
T 2xdw_A 332 EHEKDVLEWVACVR----SNFLVLCYLHDVKNTLQLHDLATGAL--LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPG 405 (710)
T ss_dssp CCSSCEEEEEEEET----TTEEEEEEEETTEEEEEEEETTTCCE--EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCC
T ss_pred CCCCCeEEEEEEEc----CCEEEEEEEECCEEEEEEEECCCCCE--EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCC
Confidence 543 688899987 5788888888885 55667655554 45566667788899999998765533 32 46
Q ss_pred cEEEEEeCCCC
Q psy13856 212 SVSLWKENTDG 222 (271)
Q Consensus 212 ~v~iw~~~~~~ 222 (271)
+|+.||+.++.
T Consensus 406 ~i~~~d~~tg~ 416 (710)
T 2xdw_A 406 IIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTSSS
T ss_pred EEEEEECCCCc
Confidence 89999987653
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.92 E-value=1.2e-07 Score=77.69 Aligned_cols=166 Identities=12% Similarity=0.036 Sum_probs=101.4
Q ss_pred cCCCCCCCEEEEccCC---Ce--EEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCC--------------
Q psy13856 29 ESPLRIGHTLISCDTQ---AH--IGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH-------------- 85 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d---~~--i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d-------------- 85 (271)
....|||+.|+.++.+ +. |.+|++ ...+..+. . +..++|+|||+.|+.++.+
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E----EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C----ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 3455799998887754 33 666666 22222221 1 6789999999988887643
Q ss_pred -------------CcEEEEEeecCCCCceeecc---ceeeEEEeeccceee-e-----------EEEE--eeCCceEEeE
Q psy13856 86 -------------EAAKHLGTVQSSSPACLQPK---YFKLTVYSTKLTRIL-I-----------LVRI--CGGDKWIEET 135 (271)
Q Consensus 86 -------------~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~l~-~-----------~v~i--~~~~~~~~~~ 135 (271)
..|++|+. .+++.+... ......++.++ .++ . ...+ .+.+. ..
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~---~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~---~~ 211 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDT---ESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK---EE 211 (347)
T ss_dssp CC---------CEEEEEEEET---TTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE---EE
T ss_pred eeecCcccccCccceEEEEEC---CCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCc---eE
Confidence 46778887 555441211 22334455555 332 1 1233 22332 22
Q ss_pred EecCCCcceEEEEEccCCCCCCcEEEEEeCC--------CeEEEEEcCCCceeeeeeeccCCCCeEE-EEEecCCCEEEE
Q psy13856 136 KLENHSDWVRDVAWAPSWGLSKCMIASCSQD--------RKVIIWTSNDYVTWTPFIMNTFDDVVWN-VSWSLTGDILTV 206 (271)
Q Consensus 136 ~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~h~~~v~~-v~~~~~g~~l~s 206 (271)
.+..+ ..+..+ +| +|++|+.++.+ ..|.+|| +++. ......|...+.. +.|+ ++ ++++
T Consensus 212 ~l~~~-~~~~~~--sp----dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~--~~l~~~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 212 KMFEK-VSFYAV--DS----DGERILLYGKPEKKYMSEHNKLYIYD--GKEV--MGILDEVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp EEEEE-ESEEEE--EE----CSSCEEEEECCSSSCCCSSCEEEEEC--SSCE--EESSTTCCSEEEEEEEET-TE-EEEE
T ss_pred EeccC-cceeeE--CC----CCCEEEEEEccccCCccccceEEEEC--CCce--EeccccCCcccCCccEEc-Cc-EEEE
Confidence 33333 444444 88 68888777754 3678888 4442 3444566777886 8999 88 9999
Q ss_pred EECCCcEEEEEeCC
Q psy13856 207 SCGDNSVSLWKENT 220 (271)
Q Consensus 207 ~s~D~~v~iw~~~~ 220 (271)
++.++.++|| +++
T Consensus 279 ~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 279 LFEEGSVNLY-IWD 291 (347)
T ss_dssp EEETTEEEEE-EES
T ss_pred EecCCcEEEE-EcC
Confidence 9999999999 883
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.92 E-value=2e-07 Score=73.52 Aligned_cols=176 Identities=11% Similarity=0.008 Sum_probs=109.8
Q ss_pred CCCCCEEE-EccCCCeEEeccc----eeee-ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 32 LRIGHTLI-SCDTQAHIGIRST----ISLL-QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 32 ~~~g~~l~-s~s~d~~i~lwd~----~~~~-~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
.++|.+++ +...++.|..|+. ...+ ..+... +.+++++++++.+++.. ++.|..|+. .........
T Consensus 32 ~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----p~~i~~~~~g~l~v~~~-~~~i~~~d~---~~~~~~~~~ 103 (270)
T 1rwi_B 32 DSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQ----PQGLAVDGAGTVYVTDF-NNRVVTLAA---GSNNQTVLP 103 (270)
T ss_dssp CTTCCEEEEECSSSCEEEEECC-----EECCCCSCCS----CCCEEECTTCCEEEEET-TTEEEEECT---TCSCCEECC
T ss_pred CCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCC----cceeEECCCCCEEEEcC-CCEEEEEeC---CCceEeeee
Confidence 46888777 6577899999987 1111 122234 78999999998666655 888989986 332222111
Q ss_pred ----cee-eEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcC
Q psy13856 106 ----YFK-LTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN 175 (271)
Q Consensus 106 ----~~~-~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 175 (271)
..+ ...+..+++.++ +.|.+...+..............+.+++++| ++.++++...++.|.+||..
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~----~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN----SGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT----TCCEEEEEGGGTEEEEECTT
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC----CCCEEEEECCCCEEEEEecC
Confidence 112 222333455444 3444422221111111122334678899999 57888887778899999987
Q ss_pred CCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 176 DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 176 ~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.... ......+...+..++++++|.++++...++.|.+|+....
T Consensus 180 ~~~~--~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 180 SNNQ--VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TCCE--EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCce--EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 7553 2222233367889999999987777777889999997643
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.91 E-value=2.4e-07 Score=75.88 Aligned_cols=167 Identities=10% Similarity=-0.083 Sum_probs=107.2
Q ss_pred cCCCCCCCEEEEccCC---------------------------CeEEeccc----e-eeeccccccccccceEEEEcCCC
Q psy13856 29 ESPLRIGHTLISCDTQ---------------------------AHIGIRST----I-SLLQGSVYLRRESNKAGALSPKL 76 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d---------------------------~~i~lwd~----~-~~~~~h~~~~~~~i~~~~~s~~~ 76 (271)
....|||+.|+.++.+ ..|.+||+ . ..+.. . . +..++|+|+|
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~----~~~~~~spdg 182 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R----FSSGIWHRDK 182 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T----TCEEEEETTE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C----cccccCCCCe
Confidence 3445799988887642 56888887 2 44444 3 5 8899999999
Q ss_pred CeEEEEeCCC-------cEEEEEeecCCCCceeeccc-eeeEEEeeccceee--e-----------EEEEeeCCceEEeE
Q psy13856 77 NRSATSSFHE-------AAKHLGTVQSSSPACLQPKY-FKLTVYSTKLTRIL--I-----------LVRICGGDKWIEET 135 (271)
Q Consensus 77 ~~l~s~s~d~-------~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~l~--~-----------~v~i~~~~~~~~~~ 135 (271)
.++++..+. ...+|... +++...... ......+++++.++ . .+.+.+.+ +...
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~--~~~~ 256 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWE---DGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGK--EVMG 256 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEE---TTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEECSS--CEEE
T ss_pred -EEEEEecccccccccccccEEEeC---CCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEECCC--ceEe
Confidence 877776652 45666652 232222111 21122266777665 1 33332234 3333
Q ss_pred EecCCCcceEE-EEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcE-
Q psy13856 136 KLENHSDWVRD-VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV- 213 (271)
Q Consensus 136 ~~~~h~~~v~~-v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v- 213 (271)
...+|...+.. +.|+ . + ++++++.++.+++| +.++. ...+..+...|.+++|+| .++++++.++..
T Consensus 257 l~~~~~~~~~~~~~~s-d----g-~~~~~~~~~~~~l~-~~~g~---~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~ 324 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD-G----K-VYFTLFEEGSVNLY-IWDGE---IKPIAKGRHWIMGFDVDE--IVVYLKETATRLR 324 (347)
T ss_dssp SSTTCCSEEEEEEEET-T----E-EEEEEEETTEEEEE-EESSS---EEEEECSSSEEEEEEESS--SEEEEEECSSSCC
T ss_pred ccccCCcccCCccEEc-C----c-EEEEEecCCcEEEE-EcCCc---eEEEecCCCeEEeeeeeC--cEEEEEcCCCChH
Confidence 34556677886 8898 5 5 88899999999999 87544 333444577899999999 677777777665
Q ss_pred EEEEeC
Q psy13856 214 SLWKEN 219 (271)
Q Consensus 214 ~iw~~~ 219 (271)
.||.++
T Consensus 325 ~l~~~~ 330 (347)
T 2gop_A 325 ELFTWD 330 (347)
T ss_dssp EEEEES
T ss_pred HheEeC
Confidence 788876
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.87 E-value=1e-06 Score=70.15 Aligned_cols=177 Identities=10% Similarity=0.021 Sum_probs=112.9
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc----eeeecccc-ccccccceEEEEcCCCCeEEEEeC-CCcEEEEEeecCCCCc
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST----ISLLQGSV-YLRRESNKAGALSPKLNRSATSSF-HEAAKHLGTVQSSSPA 100 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~-~~~~~~i~~~~~s~~~~~l~s~s~-d~~i~~~d~~~~~~~~ 100 (271)
......|+|+++++ .++.|..||. +..+..+. .. +.++.+.++|+.+++.+. ++.+..++ .+++
T Consensus 40 ~~~~~~pdG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~----~~~~~~~~dG~~lv~~~~~~~~v~~vd----~~Gk 109 (276)
T 3no2_A 40 NSVAATKAGEILFS--YSKGAKMITRDGRELWNIAAPAGCE----MQTARILPDGNALVAWCGHPSTILEVN----MKGE 109 (276)
T ss_dssp CEEEECTTSCEEEE--CBSEEEEECTTSCEEEEEECCTTCE----EEEEEECTTSCEEEEEESTTEEEEEEC----TTSC
T ss_pred cCeEECCCCCEEEe--CCCCEEEECCCCCEEEEEcCCCCcc----ccccEECCCCCEEEEecCCCCEEEEEe----CCCC
Confidence 33345579998884 4678999987 44444432 34 788999999999999877 66665555 3444
Q ss_pred eeeccce-----------eeEEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEE
Q psy13856 101 CLQPKYF-----------KLTVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 163 (271)
Q Consensus 101 ~~~~~~~-----------~~~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~ 163 (271)
.+..... .......++++++ +.|.. ...+ +.+..+... ....++...+ ++++++++
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G--~~~w~~~~~-~~~~~~~~~~----~g~~~v~~ 182 (276)
T 3no2_A 110 VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNG--QLLNSVKLS-GTPFSSAFLD----NGDCLVAC 182 (276)
T ss_dssp EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTS--CEEEEEECS-SCCCEEEECT----TSCEEEEC
T ss_pred EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCC--CEEEEEECC-CCccceeEcC----CCCEEEEe
Confidence 4433211 1112234456655 55555 4446 566666543 4456677788 68999999
Q ss_pred eCCCeEEEEEcCCCceeeeeeeccCC------CCeEEEEEecCCCEEEEEECC--------CcEEEEEeCCCC
Q psy13856 164 SQDRKVIIWTSNDYVTWTPFIMNTFD------DVVWNVSWSLTGDILTVSCGD--------NSVSLWKENTDG 222 (271)
Q Consensus 164 ~~dg~i~iwd~~~~~~~~~~~~~~h~------~~v~~v~~~~~g~~l~s~s~D--------~~v~iw~~~~~~ 222 (271)
+.+++|..+|..+++. +..+.... ..+..+...++|.++++.... +..++++++..+
T Consensus 183 ~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 183 GDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp BTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 9888999999997775 33333221 236788888999988887521 244677775444
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.86 E-value=4.6e-08 Score=81.45 Aligned_cols=121 Identities=11% Similarity=-0.024 Sum_probs=90.1
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecccee
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFK 108 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~ 108 (271)
|+..|+++ .++.|++||+ ......|... +.++.+.+. .+++++.||.+.+|++ +.
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~----v~~i~~~~p--~~av~~~dG~L~v~dl---~~---------- 155 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKP----VFQLKNVNN--TLVILNSVNDLSALDL---RT---------- 155 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSC----EEEEEECSS--EEEEEETTSEEEEEET---TT----------
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecc----eeeEEecCC--CEEEEECCCCEEEEEc---cC----------
Confidence 88889998 8899999998 3344556655 777777654 3889999999999998 22
Q ss_pred eEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee---
Q psy13856 109 LTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM--- 185 (271)
Q Consensus 109 ~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--- 185 (271)
+ .... +...|.+++|+|+ | ++.|..||.+++|+...........+
T Consensus 156 --------------------~--~~~~----~~~~Vs~v~WSpk----G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~P 203 (388)
T 1xip_A 156 --------------------K--STKQ----LAQNVTSFDVTNS----Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLP 203 (388)
T ss_dssp --------------------C--CEEE----EEESEEEEEECSS----E--EEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred --------------------C--cccc----ccCCceEEEEcCC----c--eEEEEcCCcEEEEcCCCccccccceecCC
Confidence 2 1111 3458999999994 6 78899999999998877552101122
Q ss_pred ---c---cCCCCeEEEEEecCCCEEEE
Q psy13856 186 ---N---TFDDVVWNVSWSLTGDILTV 206 (271)
Q Consensus 186 ---~---~h~~~v~~v~~~~~g~~l~s 206 (271)
. +|...|.+|.|.+++.++++
T Consensus 204 p~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 204 SELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cccccccCCCeeEEEEEEecCCeEEEE
Confidence 2 36788999999999988876
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.85 E-value=2.1e-06 Score=75.29 Aligned_cols=192 Identities=10% Similarity=0.047 Sum_probs=115.6
Q ss_pred ccCCCCCCCEEEEccCCCeEEeccc-------eeeeccccccccccceEEEEc----CCCCeEEEEe-CCCcEEEEEeec
Q psy13856 28 TESPLRIGHTLISCDTQAHIGIRST-------ISLLQGSVYLRRESNKAGALS----PKLNRSATSS-FHEAAKHLGTVQ 95 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~i~lwd~-------~~~~~~h~~~~~~~i~~~~~s----~~~~~l~s~s-~d~~i~~~d~~~ 95 (271)
.....|||+++.+++.|+.|.+||+ +..+.... . ...++|+ |||+++++++ .++++.++|.
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~----P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~-- 273 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-E----ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG-- 273 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-E----EEEEEECCSTTCTTTEEEEEEEETTEEEEEET--
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-C----CceeEEccccCCCCCEEEEEEccCCeEEEEEC--
Confidence 3445579999999999999999997 22222222 2 4789999 6999877665 5589999997
Q ss_pred CCCCceeecccee----------------eEEEeeccceee------eEEEE-ee-CCceEEeEEecCCCcceEEEEEcc
Q psy13856 96 SSSPACLQPKYFK----------------LTVYSTKLTRIL------ILVRI-CG-GDKWIEETKLENHSDWVRDVAWAP 151 (271)
Q Consensus 96 ~~~~~~~~~~~~~----------------~~~~~~~~~~l~------~~v~i-~~-~~~~~~~~~~~~h~~~v~~v~~~p 151 (271)
.+.+.++..... ....+.....+. +.|.+ .. ......+..+ .......++.|+|
T Consensus 274 -~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~p 351 (567)
T 1qks_A 274 -ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDG 351 (567)
T ss_dssp -TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECT
T ss_pred -CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECC
Confidence 666665543211 111122222222 44444 11 1111112222 2334566889999
Q ss_pred CCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeee---ccCCCCeEEEEEecCC-CEEEEEE-CCCcEEEEEeCCCC---
Q psy13856 152 SWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLTG-DILTVSC-GDNSVSLWKENTDG--- 222 (271)
Q Consensus 152 ~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~v~~~~~g-~~l~s~s-~D~~v~iw~~~~~~--- 222 (271)
++++++++. .++.|.++|..+++....... ..|.+....+ ++|++ ...+++. .+++|.+++..+.+
T Consensus 352 ----dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~ 426 (567)
T 1qks_A 352 ----SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPD 426 (567)
T ss_dssp ----TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred ----CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcc
Confidence 688776555 578999999998764211112 1344323222 57874 4444443 46899999987643
Q ss_pred -ceeEEEEeccc
Q psy13856 223 -AWQCITEMGKT 233 (271)
Q Consensus 223 -~~~~~~~~~~~ 233 (271)
.|+.+.+++..
T Consensus 427 ~~~kvv~~i~~~ 438 (567)
T 1qks_A 427 NAWKILDSFPAL 438 (567)
T ss_dssp TBTSEEEEEECS
T ss_pred ccCEEEEEEecC
Confidence 28888888754
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.85 E-value=7.9e-07 Score=71.23 Aligned_cols=175 Identities=9% Similarity=-0.029 Sum_probs=105.8
Q ss_pred CCCCCCEEEEccCCCeEEeccc----eeee-ccccccccccceEEEEcCCCCeEEEEeC-----------------CCcE
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST----ISLL-QGSVYLRRESNKAGALSPKLNRSATSSF-----------------HEAA 88 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~----~~~~-~~h~~~~~~~i~~~~~s~~~~~l~s~s~-----------------d~~i 88 (271)
..++|.++++...++.|.+||. ...+ ..........+.+++++|+|+++++.+. .+.|
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 3468998888887899999997 2222 1111111122678999999998887321 2344
Q ss_pred EEEEeecCCCCceeecc---ce-eeEEEeeccceee-----eEEEE--ee-CCce-EEeEEecCCCcceEEEEEccCCCC
Q psy13856 89 KHLGTVQSSSPACLQPK---YF-KLTVYSTKLTRIL-----ILVRI--CG-GDKW-IEETKLENHSDWVRDVAWAPSWGL 155 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~---~~-~~~~~~~~~~~l~-----~~v~i--~~-~~~~-~~~~~~~~h~~~v~~v~~~p~~~~ 155 (271)
..++. . +...... .. ....++.+++.++ +.|.+ .. ++.+ .....+..+...+.++++++
T Consensus 156 ~~~~~---~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~---- 227 (296)
T 3e5z_A 156 FRLAP---D-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA---- 227 (296)
T ss_dssp EEECT---T-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT----
T ss_pred EEECC---C-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC----
Confidence 34442 2 3322211 22 3344556666555 45555 22 4433 22333333555677899999
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEE-ecCCCEEEEEECCCcEEEEEeCC
Q psy13856 156 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW-SLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 156 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~-~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
+|+++++. ++.|.+||.. ++. ...+..+.. +.+++| .|++..|++++.++ +.-++.++
T Consensus 228 ~G~l~v~~--~~~v~~~~~~-g~~--~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~ 286 (296)
T 3e5z_A 228 GGLIWASA--GDGVHVLTPD-GDE--LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNV 286 (296)
T ss_dssp TSCEEEEE--TTEEEEECTT-SCE--EEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred CCCEEEEc--CCeEEEECCC-CCE--EEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence 58877666 7889999986 443 455555666 899999 58999888888763 44444443
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.84 E-value=9.1e-08 Score=77.99 Aligned_cols=133 Identities=5% Similarity=-0.024 Sum_probs=93.7
Q ss_pred CCCCCEEEEccCCCeEEeccc--eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceee
Q psy13856 32 LRIGHTLISCDTQAHIGIRST--ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKL 109 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~--~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~ 109 (271)
.+++..++..+.++.++.|.- ...+..+... +.+++|+|++++++++..++.|.+|+. .+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~l~~~~~~~~~i~~~d~---~~~~~-------- 78 (333)
T 2dg1_A 14 SGKSNSAVPIISESELQTITAEPWLEISKKGLQ----LEGLNFDRQGQLFLLDVFEGNIFKINP---ETKEI-------- 78 (333)
T ss_dssp CGGGGCSSCCCCGGGSCEEECEEEEEEESSCCC----EEEEEECTTSCEEEEETTTCEEEEECT---TTCCE--------
T ss_pred cCCccceeEEeecccCcccccceeEEEeccCcc----ccCcEECCCCCEEEEECCCCEEEEEeC---CCCcE--------
Confidence 345555555566788888844 4555666666 789999999998888888999999986 22221
Q ss_pred EEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC----CeEEEEEcCCCceeeeeee
Q psy13856 110 TVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWTSNDYVTWTPFIM 185 (271)
Q Consensus 110 ~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~ 185 (271)
......+...+.+++++| ++.++++...+ +.|.+||...... ...+
T Consensus 79 ------------------------~~~~~~~~~~~~~i~~~~----dg~l~v~~~~~~~~~~~i~~~d~~~~~~--~~~~ 128 (333)
T 2dg1_A 79 ------------------------KRPFVSHKANPAAIKIHK----DGRLFVCYLGDFKSTGGIFAATENGDNL--QDII 128 (333)
T ss_dssp ------------------------EEEEECSSSSEEEEEECT----TSCEEEEECTTSSSCCEEEEECTTSCSC--EEEE
T ss_pred ------------------------EEEeeCCCCCcceEEECC----CCcEEEEeCCCCCCCceEEEEeCCCCEE--EEEE
Confidence 111123557799999999 68888877766 6899999887653 2122
Q ss_pred c--cCCCCeEEEEEecCCCEEEEEEC
Q psy13856 186 N--TFDDVVWNVSWSLTGDILTVSCG 209 (271)
Q Consensus 186 ~--~h~~~v~~v~~~~~g~~l~s~s~ 209 (271)
. .+...++.++++|+|.++++...
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred ccCccCCcccceEECCCCCEEEEecc
Confidence 2 24457899999999998877654
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.83 E-value=3e-08 Score=89.33 Aligned_cols=154 Identities=11% Similarity=-0.016 Sum_probs=98.7
Q ss_pred CCCCCCCEEEEccCCC---eEEeccc------eeee-------ccccccccccceEEEEcCCCCeEE-----EEeCCCcE
Q psy13856 30 SPLRIGHTLISCDTQA---HIGIRST------ISLL-------QGSVYLRRESNKAGALSPKLNRSA-----TSSFHEAA 88 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~---~i~lwd~------~~~~-------~~h~~~~~~~i~~~~~s~~~~~l~-----s~s~d~~i 88 (271)
.|.++|.+++....++ .-.+|.. ...+ .+|... +.+++|||||++|+ .|+.+..|
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~----~~~~~~SPDG~~la~~~~~~G~~~~~i 149 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVS----LGTWAVSWDGKKVAFAQKPNAADEAVL 149 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEE----EEEEEECTTSSEEEEEEEETTCSCCEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEE----EEEEEECCCCCEEEEEECCCCCceEEE
Confidence 4557888777666544 3444543 1122 234445 78999999999988 44556789
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
++||+ .+++.+. ...+.. .....++|+| |+..|+.++.|..
T Consensus 150 ~v~dl---~tg~~~~------------------------------~~~~~~--~~~~~~~wsp----Dg~~l~~~~~d~~ 190 (695)
T 2bkl_A 150 HVIDV---DSGEWSK------------------------------VDVIEG--GKYATPKWTP----DSKGFYYEWLPTD 190 (695)
T ss_dssp EEEET---TTCCBCS------------------------------SCCBSC--CTTCCCEECT----TSSEEEEEECCCC
T ss_pred EEEEC---CCCCCcC------------------------------CcccCc--ccccceEEec----CCCEEEEEEecCC
Confidence 99998 4433220 000111 1125799999 7999999988776
Q ss_pred -------------EEEEEcCCCcee--eeeeeccCCCCeEEEEEecCCCEEEEEECCC----cEEEEEeCCCCceeEE
Q psy13856 169 -------------VIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDN----SVSLWKENTDGAWQCI 227 (271)
Q Consensus 169 -------------i~iwd~~~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~----~v~iw~~~~~~~~~~~ 227 (271)
|++|++.++... .+.....|...+..+.|+|||++|+.++.++ .|++|+... +.+..+
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~-~~~~~l 267 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE-KDFRLL 267 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC-SSCEEE
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC-CceEEe
Confidence 999999876521 1222334556789999999999998887665 566665432 344443
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.78 E-value=9.3e-07 Score=72.18 Aligned_cols=169 Identities=8% Similarity=-0.098 Sum_probs=109.6
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc---
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK--- 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~--- 105 (271)
++.++++...++.|.+||. +..+.. ... +..++++++++..++...++.|.+||. .+++.....
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~----p~~i~~~~~g~lyv~~~~~~~v~~iD~---~t~~~~~~i~~g 124 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTS----PRYIHFLSDEKAYVTQIWDYRIFIINP---KTYEITGYIECP 124 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSS----EEEEEEEETTEEEEEEBSCSEEEEEET---TTTEEEEEEECT
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCC----CcEEEEeCCCeEEEEECCCCeEEEEEC---CCCeEEEEEEcC
Confidence 4556777777899999998 344432 234 689999999854444448999999998 666655433
Q ss_pred c------eeeEEEeeccceee------eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC-----
Q psy13856 106 Y------FKLTVYSTKLTRIL------ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----- 166 (271)
Q Consensus 106 ~------~~~~~~~~~~~~l~------~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d----- 166 (271)
. .+..+....++.++ +.|.+ ..++ +....+.. ......+.++| ++++++++..+
T Consensus 125 ~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~--~~~~~i~~-g~~p~~i~~~~----dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 125 DMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETD--KVVDELTI-GIQPTSLVMDK----YNKMWTITDGGYEGSP 197 (328)
T ss_dssp TCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTT--EEEEEEEC-SSCBCCCEECT----TSEEEEEBCCBCTTCS
T ss_pred CccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCC--eEEEEEEc-CCCccceEEcC----CCCEEEEECCCccCCc
Confidence 2 22222222233333 34555 2333 44444443 23456788999 68887777655
Q ss_pred -----CeEEEEEcCCCceeeeeeecc-CCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 167 -----RKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 167 -----g~i~iwd~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+.|.++|..+.+. ...+.. .......++|+|++..|.++.. .|.+||..++
T Consensus 198 ~~~~~~~v~~id~~t~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp SCBCCCEEEEEETTTTEE--EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred cccCCceEEEEECCCCeE--EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 7899999988764 333322 1236789999999998888754 8999998765
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.76 E-value=4.9e-07 Score=82.06 Aligned_cols=161 Identities=11% Similarity=-0.007 Sum_probs=97.2
Q ss_pred ccCCCCCCCEEEEccCC-----CeEEeccc--eeeeccccccccccceEEEEcCCCCeEEEEeCCCc-------------
Q psy13856 28 TESPLRIGHTLISCDTQ-----AHIGIRST--ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEA------------- 87 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d-----~~i~lwd~--~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~------------- 87 (271)
...++|||++|+.++.+ ..|++||+ -..+..+... ..+..++|+|| +.|+.++.+..
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~--~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKW--VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEE--EESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCC--ceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 34455799998877654 46999998 1222222222 00357899999 98888877654
Q ss_pred -EEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCC
Q psy13856 88 -AKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 166 (271)
Q Consensus 88 -i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~d 166 (271)
|++|++ .++... . ..+.....+...+..+.|+| ||++|+..+.+
T Consensus 244 ~v~~~~l---gt~~~~--------------------------~--~lv~~~~~~~~~~~~~~~Sp----DG~~l~~~~~~ 288 (741)
T 1yr2_A 244 TVWLHRL---GTPQSA--------------------------D--QPVFATPELPKRGHGASVSS----DGRWVVITSSE 288 (741)
T ss_dssp EEEEEET---TSCGGG--------------------------C--EEEECCTTCTTCEEEEEECT----TSCEEEEEEEC
T ss_pred EEEEEEC---CCCchh--------------------------C--EEEeccCCCCeEEEEEEECC----CCCEEEEEEEc
Confidence 444554 111100 0 22222233444688999999 79888877754
Q ss_pred C-----eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC----CcEEEEEeCCC-CceeEE
Q psy13856 167 R-----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWKENTD-GAWQCI 227 (271)
Q Consensus 167 g-----~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D----~~v~iw~~~~~-~~~~~~ 227 (271)
+ .|++||+.++.......+..+...+.... +|+|..|+..+.+ +.|.+|+++.. +.|..+
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l 358 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV 358 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE
T ss_pred cCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE
Confidence 4 89999998762100223334444444443 4888888887763 45999998764 345443
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.72 E-value=1.6e-06 Score=69.79 Aligned_cols=151 Identities=6% Similarity=-0.019 Sum_probs=99.3
Q ss_pred CCCCCEEEEccCC---------------CeEEeccc---eeeeccccccccccceEEEEc----CCCCeEEEE-eCCCcE
Q psy13856 32 LRIGHTLISCDTQ---------------AHIGIRST---ISLLQGSVYLRRESNKAGALS----PKLNRSATS-SFHEAA 88 (271)
Q Consensus 32 ~~~g~~l~s~s~d---------------~~i~lwd~---~~~~~~h~~~~~~~i~~~~~s----~~~~~l~s~-s~d~~i 88 (271)
.++|.++++...+ +.|..|+. ...+..+... ...++|+ |+++.++.+ ..++.|
T Consensus 125 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~----~~~i~~~~~~d~dg~~l~v~~~~~~~i 200 (314)
T 1pjx_A 125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQF----PNGIAVRHMNDGRPYQLIVAETPTKKL 200 (314)
T ss_dssp CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESS----EEEEEEEECTTSCEEEEEEEETTTTEE
T ss_pred CCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCC----cceEEEecccCCCCCEEEEEECCCCeE
Confidence 3678887777655 46666665 2222223333 6789999 999755444 567889
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCC-cceEEEEEccCCCCCCcEEEEEeCCC
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHS-DWVRDVAWAPSWGLSKCMIASCSQDR 167 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~~~l~s~~~dg 167 (271)
.+|+.. ..+.... ......+.++. .....+++++ ++.++++...++
T Consensus 201 ~~~~~~--~~g~~~~---------------------------~~~~~~~~~~~~~~p~~i~~d~----~G~l~v~~~~~~ 247 (314)
T 1pjx_A 201 WSYDIK--GPAKIEN---------------------------KKVWGHIPGTHEGGADGMDFDE----DNNLLVANWGSS 247 (314)
T ss_dssp EEEEEE--ETTEEEE---------------------------EEEEEECCCCSSCEEEEEEEBT----TCCEEEEEETTT
T ss_pred EEEECC--CCCcccc---------------------------ceEEEECCCCCCCCCCceEECC----CCCEEEEEcCCC
Confidence 899862 0111100 01222333443 5677899999 688888888889
Q ss_pred eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEE-ECCCcEEEEEeCCC
Q psy13856 168 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENTD 221 (271)
Q Consensus 168 ~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~~~~~ 221 (271)
.|.+||..+++. ...+..+...+.+++|+|+|..|+.+ ..++.|..|++...
T Consensus 248 ~i~~~d~~~g~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 248 HIEVFGPDGGQP--KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEECTTCBSC--SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEEcCCCCcE--eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999999885553 34445555789999999999955544 45678999987643
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.63 E-value=7.9e-06 Score=66.63 Aligned_cols=176 Identities=7% Similarity=0.005 Sum_probs=103.4
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeeecccc-ccccccceEEEEcCCCCeEEEEe--CCCcEEEEEeecCCCCceeec
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLLQGSV-YLRRESNKAGALSPKLNRSATSS--FHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~-~~~~~~i~~~~~s~~~~~l~s~s--~d~~i~~~d~~~~~~~~~~~~ 104 (271)
+++.++++...++.|.+||. ...+.... .........+++ ++..++.+. .++.|.++|. .+++....
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~---~t~~~~~~ 167 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDT---ETDKVVDE 167 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEET---TTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEEC---CCCeEEEE
Confidence 57766666657899999998 22333222 000001567777 344555554 4889999998 66665544
Q ss_pred cce----eeEEEeeccceee---e------------EEEEeeCCceEEeEEecCC-CcceEEEEEccCCCCCCcEEEEEe
Q psy13856 105 KYF----KLTVYSTKLTRIL---I------------LVRICGGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 105 ~~~----~~~~~~~~~~~l~---~------------~v~i~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
... ....++.+++.++ + .+.+.+....+....+.-. ......++++| ++.++..+.
T Consensus 168 i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~----d~~~lyv~~ 243 (328)
T 3dsm_A 168 LTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG----TRDTLYWIN 243 (328)
T ss_dssp EECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT----TSCEEEEES
T ss_pred EEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec----CCCEEEEEc
Confidence 321 2223334455444 2 3444222111444444321 24678999999 577776665
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEec-CCCEEEEE----ECCCcEEEEEeC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVS----CGDNSVSLWKEN 219 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~----s~D~~v~iw~~~ 219 (271)
. .|.+||..+++......+.........++++| ++.++++. ..++.|.+|+.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 4 89999998766311111222245788999999 56666666 568899999987
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.60 E-value=1.8e-05 Score=62.88 Aligned_cols=147 Identities=10% Similarity=-0.024 Sum_probs=101.4
Q ss_pred cccCCCCCCCEEEEccCCCeEEeccc---eeee--ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCce
Q psy13856 27 YTESPLRIGHTLISCDTQAHIGIRST---ISLL--QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPAC 101 (271)
Q Consensus 27 ~~~~~~~~g~~l~s~s~d~~i~lwd~---~~~~--~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~ 101 (271)
......++|.++++...++.|..||. ...+ ..+... +.+++++++++..++...++.|..|+. . +..
T Consensus 18 ~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~~~i~~~~~---~-g~~ 89 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAK----VMCLTISSDGEVWFTENAANKIGRITK---K-GII 89 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCC----EEEEEECTTSCEEEEETTTTEEEEECT---T-SCE
T ss_pred cceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCc----eeeEEECCCCCEEEeCCCCCeEEEECC---C-CcE
Confidence 33334468888887777799999987 2222 123344 789999999988777766788888875 1 110
Q ss_pred eeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceee
Q psy13856 102 LQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT 181 (271)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 181 (271)
.. ..+......+.+++++| ++.++++...++.|.+||. ++...
T Consensus 90 ------------------------------~~-~~~~~~~~~~~~i~~~~----~g~l~v~~~~~~~i~~~d~-~g~~~- 132 (299)
T 2z2n_A 90 ------------------------------KE-YTLPNPDSAPYGITEGP----NGDIWFTEMNGNRIGRITD-DGKIR- 132 (299)
T ss_dssp ------------------------------EE-EECSSTTCCEEEEEECT----TSCEEEEETTTTEEEEECT-TCCEE-
T ss_pred ------------------------------EE-EeCCCcCCCceeeEECC----CCCEEEEecCCceEEEECC-CCCEE-
Confidence 11 11122345688999998 5888888777889999998 44421
Q ss_pred eeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEe
Q psy13856 182 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 182 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
..........+..++++++|.++++...++.|..|+.
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 2222334457899999999988887777788999987
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.59 E-value=2.1e-05 Score=63.15 Aligned_cols=173 Identities=6% Similarity=-0.041 Sum_probs=104.9
Q ss_pred CCCCEEEE-------ccCCCeEEeccc----eeeecc-----ccccccccceEEEEcCC-CCeEEEEeCCCcEEEEEeec
Q psy13856 33 RIGHTLIS-------CDTQAHIGIRST----ISLLQG-----SVYLRRESNKAGALSPK-LNRSATSSFHEAAKHLGTVQ 95 (271)
Q Consensus 33 ~~g~~l~s-------~s~d~~i~lwd~----~~~~~~-----h~~~~~~~i~~~~~s~~-~~~l~s~s~d~~i~~~d~~~ 95 (271)
++|.++++ +..++.|..||. ...+.. +... +.+++++++ ++++++. ....|.+|+.
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~----~~~i~~~~~~g~l~v~~-~~~~l~~~d~-- 99 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGI----PAGCQCDRDANQLFVAD-MRLGLLVVQT-- 99 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECC----EEEEEECSSSSEEEEEE-TTTEEEEEET--
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCC----CceEEEecCCCcEEEEE-CCCCEEEEeC--
Confidence 68888888 777899999996 322222 4445 789999999 6655544 4446778886
Q ss_pred CCCCceeec-c--------c-eeeEEEeeccceee---eE---------------EEE---eeCCceEEeEEecCCCcce
Q psy13856 96 SSSPACLQP-K--------Y-FKLTVYSTKLTRIL---IL---------------VRI---CGGDKWIEETKLENHSDWV 144 (271)
Q Consensus 96 ~~~~~~~~~-~--------~-~~~~~~~~~~~~l~---~~---------------v~i---~~~~~~~~~~~~~~h~~~v 144 (271)
. ++.... . . .....+..+++.++ .. ..+ ...+. .. .+..+....
T Consensus 100 -~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~-~~~~~~~~~ 174 (314)
T 1pjx_A 100 -D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ--MI-QVDTAFQFP 174 (314)
T ss_dssp -T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC--EE-EEEEEESSE
T ss_pred -C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCC--EE-EeccCCCCc
Confidence 3 433322 1 0 12223333444443 10 222 22232 11 122233456
Q ss_pred EEEEEc----cCCCCCCcEE-EEEeCCCeEEEEEcC-CCceee---eeeeccCC-CCeEEEEEecCCCEEEEEECCCcEE
Q psy13856 145 RDVAWA----PSWGLSKCMI-ASCSQDRKVIIWTSN-DYVTWT---PFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVS 214 (271)
Q Consensus 145 ~~v~~~----p~~~~~~~~l-~s~~~dg~i~iwd~~-~~~~~~---~~~~~~h~-~~v~~v~~~~~g~~l~s~s~D~~v~ 214 (271)
..++++ | ++..+ ++...++.|.+||.. .+.... ...+..+. ..+..++++++|.++++...++.|.
T Consensus 175 ~~i~~~~~~d~----dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 175 NGIAVRHMNDG----RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp EEEEEEECTTS----CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred ceEEEecccCC----CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 789999 8 57554 555668899999976 332110 12233333 5678899999999988888889999
Q ss_pred EEEeCCC
Q psy13856 215 LWKENTD 221 (271)
Q Consensus 215 iw~~~~~ 221 (271)
+|+.+++
T Consensus 251 ~~d~~~g 257 (314)
T 1pjx_A 251 VFGPDGG 257 (314)
T ss_dssp EECTTCB
T ss_pred EEcCCCC
Confidence 9998754
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.58 E-value=6.6e-06 Score=74.65 Aligned_cols=182 Identities=11% Similarity=-0.032 Sum_probs=106.6
Q ss_pred ccCCCCCCCEEEEccCCCe--------------EEeccc-------eeeec--cccccccccceEEEEcCCCCeEEEEeC
Q psy13856 28 TESPLRIGHTLISCDTQAH--------------IGIRST-------ISLLQ--GSVYLRRESNKAGALSPKLNRSATSSF 84 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~~--------------i~lwd~-------~~~~~--~h~~~~~~~i~~~~~s~~~~~l~s~s~ 84 (271)
.....|| +.|+.++.|+. |.+|++ ...+. .+... +..+.|+|||++|+..+.
T Consensus 213 ~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~----~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 213 GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR----GHGASVSSDGRWVVITSS 287 (741)
T ss_dssp CCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC----EEEEEECTTSCEEEEEEE
T ss_pred cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE----EEEEEECCCCCEEEEEEE
Confidence 4445678 87777776554 888887 11222 22234 678999999998887775
Q ss_pred CC-----cEEEEEeecCC-C-Cceeecc-ceeeEEEeeccceee---------eEEEE-e-eCCceEEeEEecCCCcceE
Q psy13856 85 HE-----AAKHLGTVQSS-S-PACLQPK-YFKLTVYSTKLTRIL---------ILVRI-C-GGDKWIEETKLENHSDWVR 145 (271)
Q Consensus 85 d~-----~i~~~d~~~~~-~-~~~~~~~-~~~~~~~~~~~~~l~---------~~v~i-~-~~~~~~~~~~~~~h~~~v~ 145 (271)
++ .|++||...+. . ...+... .........+++.++ ..+.+ . ....-.....+..+...+.
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~ 367 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLE 367 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEE
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEE
Confidence 44 78889984220 1 1111111 111222335566554 22444 2 2210022333444555666
Q ss_pred EEEEccCCCCCCcEEEEEeCCCeEEEEEcC-CCceeeeeeecc-CCCCeEEEEEecCCCEEEEE-E---CCCcEEEEEeC
Q psy13856 146 DVAWAPSWGLSKCMIASCSQDRKVIIWTSN-DYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVS-C---GDNSVSLWKEN 219 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~-s---~D~~v~iw~~~ 219 (271)
.+.+.. +.++++...|+..++|.+. .+.. ...+.. +.+.+..++++|++..++.. + ..++|++||+.
T Consensus 368 ~~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~~--~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 368 SVGIAG-----NRLFASYIHDAKSQVLAFDLDGKP--AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEB-----TEEEEEEEETTEEEEEEEETTSCE--EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEC-----CEEEEEEEECCEEEEEEEeCCCCc--eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 777764 6788889999988877665 2332 333433 35678889999998755533 2 24689999987
Q ss_pred CC
Q psy13856 220 TD 221 (271)
Q Consensus 220 ~~ 221 (271)
++
T Consensus 441 tg 442 (741)
T 1yr2_A 441 TA 442 (741)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.55 E-value=7e-05 Score=59.96 Aligned_cols=171 Identities=9% Similarity=-0.053 Sum_probs=105.3
Q ss_pred CCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc----
Q psy13856 34 IGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK---- 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~---- 105 (271)
++.++++...++.|..||. ...+ ..... +.+++++++|+++++ . +..|.+||. .++......
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~----~~~i~~~~dG~l~v~-~-~~~l~~~d~---~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAP----VSSVALRQSGGYVAT-I-GTKFCALNW---KEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEE-ECSSC----EEEEEEBTTSSEEEE-E-TTEEEEEET---TTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEE-eCCCc----eEEEEECCCCCEEEE-E-CCeEEEEEC---CCCcEEEEEecCC
Confidence 4667888888899999998 2222 23345 889999999995554 3 567778886 444332211
Q ss_pred -----ceeeEEEeeccceeeeEE--------------EE---eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEE-EE
Q psy13856 106 -----YFKLTVYSTKLTRILILV--------------RI---CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-AS 162 (271)
Q Consensus 106 -----~~~~~~~~~~~~~l~~~v--------------~i---~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s 162 (271)
......+..+++.+++.. .+ ...+. . ..+..+......++|+| +++.+ ++
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~-~~~~~~~~~pngi~~sp----dg~~lyv~ 166 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--V-KKYFDQVDISNGLDWSL----DHKIFYYI 166 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC--E-EEEEEEESBEEEEEECT----TSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC--E-EEEeeccccccceEEcC----CCCEEEEe
Confidence 112233444455544221 12 22231 1 11222334567899999 67655 56
Q ss_pred EeCCCeEEEEEcC--CCceeeee---eeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 163 CSQDRKVIIWTSN--DYVTWTPF---IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 163 ~~~dg~i~iwd~~--~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.+.++.|.+|++. ++...... .+..+......++++++|.+.++...++.|..|+..++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 6668899999974 44321111 12233456788999999998888888889999998765
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.53 E-value=2.8e-05 Score=61.77 Aligned_cols=142 Identities=12% Similarity=-0.018 Sum_probs=97.8
Q ss_pred CCCCEEEEccCCCeEEeccc---eeee--ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 33 RIGHTLISCDTQAHIGIRST---ISLL--QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~---~~~~--~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
++|.++++...++.|..||. ...+ ..+... +.++++.++++..++...++.|..++. + +..
T Consensus 108 ~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~~~i~~~~~-~---g~~------ 173 (299)
T 2z2n_A 108 PNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSY----PSFITLGSDNALWFTENQNNAIGRITE-S---GDI------ 173 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCC----EEEEEECTTSCEEEEETTTTEEEEECT-T---CCE------
T ss_pred CCCCEEEEecCCceEEEECCCCCEEEecCCCCCCC----CceEEEcCCCCEEEEeCCCCEEEEEcC-C---CcE------
Confidence 57888888777789999987 2211 222334 789999999987777766778877774 1 111
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT 187 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 187 (271)
.. ..+..+...+.++++++ ++.++++...++.|.+||. ++... ......
T Consensus 174 ------------------------~~-~~~~~~~~~~~~i~~~~----~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~ 222 (299)
T 2z2n_A 174 ------------------------TE-FKIPTPASGPVGITKGN----DDALWFVEIIGNKIGRITT-SGEIT-EFKIPT 222 (299)
T ss_dssp ------------------------EE-EECSSTTCCEEEEEECT----TSSEEEEETTTTEEEEECT-TCCEE-EEECSS
T ss_pred ------------------------EE-eeCCCCCCcceeEEECC----CCCEEEEccCCceEEEECC-CCcEE-EEECCC
Confidence 11 11223345678899999 5787777777889999998 55421 222333
Q ss_pred CCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 188 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 188 h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+...+.+++++++|.++++...++.|..|+.+
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 45678999999999977766678899999973
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.53 E-value=4.4e-06 Score=69.13 Aligned_cols=126 Identities=5% Similarity=-0.059 Sum_probs=85.7
Q ss_pred CCCCEEEEccCCCeEEeccc----ee---eecc------ccccccccceEEEEcCCCCeEEEEeC-----------CCcE
Q psy13856 33 RIGHTLISCDTQAHIGIRST----IS---LLQG------SVYLRRESNKAGALSPKLNRSATSSF-----------HEAA 88 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~---~~~~------h~~~~~~~i~~~~~s~~~~~l~s~s~-----------d~~i 88 (271)
+++..++..+.++.+.++|+ .. .+.- +..........++|+|+++.++.+.. ...|
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 55666666677888999987 11 1110 01110000223789999887776543 3478
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCe
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 168 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~ 168 (271)
.+||. . +. +.+..+..+. ..+++|+| |++++++++. +.
T Consensus 289 ~viD~---~------------------------------t~--~~v~~i~~~~--p~~ia~sp----dg~~l~v~n~-~~ 326 (361)
T 2oiz_A 289 WVMDT---K------------------------------TK--QRVARIPGRD--ALSMTIDQ----QRNLMLTLDG-GN 326 (361)
T ss_dssp EEEET---T------------------------------TT--EEEEEEECTT--CCEEEEET----TTTEEEEECS-SC
T ss_pred EEEEC---C------------------------------CC--cEEEEEecCC--eeEEEECC----CCCEEEEeCC-Ce
Confidence 88887 2 22 4555566565 89999999 7888888886 99
Q ss_pred EEEEEcCCC--ceeeeeeeccCCCCeEEEEEecCCC
Q psy13856 169 VIIWTSNDY--VTWTPFIMNTFDDVVWNVSWSLTGD 202 (271)
Q Consensus 169 i~iwd~~~~--~~~~~~~~~~h~~~v~~v~~~~~g~ 202 (271)
|.+||..++ +. ...+..+....+.++++|+|.
T Consensus 327 v~v~D~~t~~l~~--~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEPKL--LRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSCEE--EEEETTSCSSEEEEEECCCSC
T ss_pred EEEEECCCCccee--eEEeccCCCCcEEEEecCCCC
Confidence 999999998 54 556566777888999999985
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.52 E-value=4.8e-05 Score=64.05 Aligned_cols=172 Identities=5% Similarity=-0.127 Sum_probs=107.7
Q ss_pred CCCCCCCEEEEccCCC--eEEeccc-----eeee----ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 30 SPLRIGHTLISCDTQA--HIGIRST-----ISLL----QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~--~i~lwd~-----~~~~----~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
...++++.|++++.++ .|.+++. ...+ ...... +.+++++|++..|+.+..++.|+.|+. ..
T Consensus 177 a~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~----p~~iav~p~~g~lyv~d~~~~I~~~d~---~~ 249 (409)
T 3hrp_A 177 AVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGK----IGAVALDETEEWLYFVDSNKNFGRFNV---KT 249 (409)
T ss_dssp EECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSC----CCBCEECTTSSEEEEECTTCEEEEEET---TT
T ss_pred eEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCC----cEEEEEeCCCCeEEEEECCCcEEEEEC---CC
Confidence 3446888888877766 6777776 1222 113344 789999995555555777888999987 33
Q ss_pred Cceeec----c----cee---eEEEeec-cceee-----eEEEE-eeCCceEEeEEecCCC---------------cceE
Q psy13856 99 PACLQP----K----YFK---LTVYSTK-LTRIL-----ILVRI-CGGDKWIEETKLENHS---------------DWVR 145 (271)
Q Consensus 99 ~~~~~~----~----~~~---~~~~~~~-~~~l~-----~~v~i-~~~~~~~~~~~~~~h~---------------~~v~ 145 (271)
+..... . ... ...+... +..++ +.|.. ..++. ...+.++. ....
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 332211 0 111 3444443 33333 44444 33332 22222221 3467
Q ss_pred EEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeeeccC---------------CCCeEEEEEecCCCEEEEEEC
Q psy13856 146 DVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGDILTVSCG 209 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~h---------------~~~v~~v~~~~~g~~l~s~s~ 209 (271)
.++++| ++.++++-. .++.|+.|+..++. ...+.++ -.....++++++|.++++-..
T Consensus 327 gia~d~----dG~lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 327 GMTVDE----DGNFYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp EEEECT----TCCEEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred EEEEeC----CCCEEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 899999 688888887 88999999976665 3333333 235789999999888888888
Q ss_pred CCcEEEEEe
Q psy13856 210 DNSVSLWKE 218 (271)
Q Consensus 210 D~~v~iw~~ 218 (271)
++.|+.+.+
T Consensus 400 n~~Ir~i~~ 408 (409)
T 3hrp_A 400 GKAIRKYAV 408 (409)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEe
Confidence 888888775
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.50 E-value=1.6e-07 Score=78.19 Aligned_cols=169 Identities=10% Similarity=-0.018 Sum_probs=82.4
Q ss_pred CCCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeec
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
+|.-++..+++++.|+.|..||. +..+.. +. +.+..+..++..+++++.|+.++.||. .+++.+..
T Consensus 4 sP~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~----~~s~p~~~~g~~~v~~s~dg~l~a~d~---~tG~~~w~ 74 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP----VLQVPTHVEEPAFLPDPNDGSLYTLGS---KNNEGLTK 74 (369)
T ss_dssp ----CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC----SCCCC-----CCEEECTTTCCEEEC--------CCSEE
T ss_pred CCeeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CC----ceecceEcCCCEEEEeCCCCEEEEEEC---CCCceeee
Confidence 45557888999999999999997 333333 33 555556677878888889999999998 55554332
Q ss_pred cce--e----eE-EEeeccceee----eEEEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEE
Q psy13856 105 KYF--K----LT-VYSTKLTRIL----ILVRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 171 (271)
Q Consensus 105 ~~~--~----~~-~~~~~~~~l~----~~v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~i 171 (271)
..+ + .. .....+..++ +.+.. ..++ +.+..+..+. ...++| ++..+++++.|+.|+.
T Consensus 75 ~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG--~~~w~~~~~~----~~~~~p----~~~~v~~~~~dg~v~a 144 (369)
T 2hz6_A 75 LPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTG--EKQQTLSSAF----ADSLSP----STSLLYLGRTEYTITM 144 (369)
T ss_dssp CSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEEC
T ss_pred eeccCccccccCceEecCCEEEEEeCCCEEEEEECCCC--cEEEEecCCC----cccccc----cCCEEEEEecCCEEEE
Confidence 211 0 00 0001122222 44444 3344 3444444332 234566 4778888899999999
Q ss_pred EEcCCCce-eeeeeeccCCCCeEEEEEecCC---CEEEEEECCCcEEEEEeCCCC
Q psy13856 172 WTSNDYVT-WTPFIMNTFDDVVWNVSWSLTG---DILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 172 wd~~~~~~-~~~~~~~~h~~~v~~v~~~~~g---~~l~s~s~D~~v~iw~~~~~~ 222 (271)
||.++++. |.. ..... ....+.++. ..+++++.|+.|+.||.+++.
T Consensus 145 ~d~~tG~~~W~~-~~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 145 YDTKTRELRWNA-TYFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCSSSSSCCCEE-EEEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EECCCCCEEEeE-ecccc----cCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 99998764 211 11111 112233322 457778889999999998764
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=2.1e-05 Score=66.26 Aligned_cols=177 Identities=7% Similarity=-0.115 Sum_probs=105.9
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCC--cEEEEEeecCCCCcee----
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHE--AAKHLGTVQSSSPACL---- 102 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~--~i~~~d~~~~~~~~~~---- 102 (271)
++|+++++...++.|+.||. +..+...... .. ++|+++++.|+.+..++ .|..++.........+
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~----~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~ 214 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG----GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLG 214 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCCB----CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECC
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC----Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeecc
Confidence 68888888888899999998 3333222233 44 99999999988888766 6777776211111111
Q ss_pred e-ccce-eeEEEee-ccceee----eEEEE-ee-CCceEEeEE--ecCCCcce--EEEEEccCCCCCCcEEEEEeCCCeE
Q psy13856 103 Q-PKYF-KLTVYST-KLTRIL----ILVRI-CG-GDKWIEETK--LENHSDWV--RDVAWAPSWGLSKCMIASCSQDRKV 169 (271)
Q Consensus 103 ~-~~~~-~~~~~~~-~~~~l~----~~v~i-~~-~~~~~~~~~--~~~h~~~v--~~v~~~p~~~~~~~~l~s~~~dg~i 169 (271)
. .... ....+.. .+..++ +.|.. .. .+....... ..++.... ..++|+|. ++.++++-..++.|
T Consensus 215 ~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~---~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 215 STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV---DSNFYMSDQNLSSV 291 (409)
T ss_dssp TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT---TTEEEEEETTTTEE
T ss_pred chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC---CCEEEEEeCCCCEE
Confidence 1 1111 1222333 233333 44444 22 221111111 12222222 38999995 47777777788999
Q ss_pred EEEEcCCCceeeeeeeccC---------------CCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCC
Q psy13856 170 IIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTD 221 (271)
Q Consensus 170 ~iwd~~~~~~~~~~~~~~h---------------~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~ 221 (271)
+.|+.... ...+.++ -.....++++++|.++++-+ .++.|+.|++.++
T Consensus 292 ~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 292 YKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 99987643 1222222 13578999999999888877 7899999997644
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.47 E-value=1.3e-05 Score=64.53 Aligned_cols=144 Identities=9% Similarity=-0.043 Sum_probs=95.4
Q ss_pred CCCC-EEEEccCCCeEEeccc---eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecccee
Q psy13856 33 RIGH-TLISCDTQAHIGIRST---ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFK 108 (271)
Q Consensus 33 ~~g~-~l~s~s~d~~i~lwd~---~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~ 108 (271)
++|+ ++++...++.|..|+. ...+..+... +.+++++++|+++++...++.|..|+. . +....
T Consensus 54 ~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~----~~gl~~d~dG~l~v~~~~~~~v~~~~~---~-g~~~~----- 120 (305)
T 3dr2_A 54 EAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAF----TNGNAVDAQQRLVHCEHGRRAITRSDA---D-GQAHL----- 120 (305)
T ss_dssp GGGTEEEEEETTTTEEEEEETTSCEEEEEESCSC----EEEEEECTTSCEEEEETTTTEEEEECT---T-SCEEE-----
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCc----cceeeECCCCCEEEEECCCCEEEEECC---C-CCEEE-----
Confidence 5777 7788888899999987 4445555555 789999999987666555677877775 2 22111
Q ss_pred eEEEeeccceeeeEEEEeeCCceEEeEEecCC-CcceEEEEEccCCCCCCcEEEE----EeC-------------CCeEE
Q psy13856 109 LTVYSTKLTRILILVRICGGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCMIAS----CSQ-------------DRKVI 170 (271)
Q Consensus 109 ~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~~l~s----~~~-------------dg~i~ 170 (271)
......+. ...+.+++++| ++.++++ |.. .+.|.
T Consensus 121 ------------------------~~~~~~~~~~~~~~~i~~d~----dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 121 ------------------------LVGRYAGKRLNSPNDLIVAR----DGAIWFTDPPFGLRKPSQGCPADPELAHHSVY 172 (305)
T ss_dssp ------------------------EECEETTEECSCCCCEEECT----TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEE
T ss_pred ------------------------EEeccCCCccCCCCCEEECC----CCCEEEeCcCCCccccccccccccccCCCeEE
Confidence 00011111 23466799999 6888886 332 25677
Q ss_pred EEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC------CcEEEEEeCCC
Q psy13856 171 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD------NSVSLWKENTD 221 (271)
Q Consensus 171 iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D------~~v~iw~~~~~ 221 (271)
.+|..+++. ..+. .....+.++|+|+++.|+.+... +.|..|++..+
T Consensus 173 ~~d~~~g~~---~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 173 RLPPDGSPL---QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EECSSSCCC---EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEcCCCCcE---EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 777765553 2222 33456889999999988777665 68999998755
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.46 E-value=0.00016 Score=57.26 Aligned_cols=173 Identities=9% Similarity=-0.049 Sum_probs=109.4
Q ss_pred CCCCCEEEEccCCCeEEeccc---eeee--ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-
Q psy13856 32 LRIGHTLISCDTQAHIGIRST---ISLL--QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK- 105 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~---~~~~--~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~- 105 (271)
.++|.++++...++.|..+|. ...+ ...... +.++++.+++++.++...++.|..++. . +......
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~~~i~~~~~---~-g~~~~~~~ 141 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSG----PYGITEGLNGDIWFTQLNGDRIGKLTA---D-GTIYEYDL 141 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCC----EEEEEECSTTCEEEEETTTTEEEEECT---T-SCEEEEEC
T ss_pred CCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCC----CccceECCCCCEEEEccCCCeEEEECC---C-CCEEEccC
Confidence 367888887777788999987 2222 112234 789999999988777766788888875 3 3332211
Q ss_pred ----ceee-EEEeeccceee-----eEEEE-eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEc
Q psy13856 106 ----YFKL-TVYSTKLTRIL-----ILVRI-CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS 174 (271)
Q Consensus 106 ----~~~~-~~~~~~~~~l~-----~~v~i-~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~ 174 (271)
..+. .....+++..+ +.+.. ...+.+.. .....+...+.++++++ ++.++++....+.|.+|+.
T Consensus 142 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~----~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEE-YPLPTNAAAPVGITSGN----DGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEE-EECSSTTCCEEEEEECT----TSSEEEEETTTTEEEEECT
T ss_pred CCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEE-eeCCCCCCCcceEEECC----CCCEEEEccCCCEEEEEcC
Confidence 1122 22333455443 33444 33443222 22233445688999998 5787777777788999998
Q ss_pred CCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 175 NDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 175 ~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
++... ......+...+.+++++++|.+.++...++.|..|+..
T Consensus 217 -~g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 217 -TGEIS-EYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp -TCCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred -CCcEE-EEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 44321 22233345678899999999977776667899999973
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.40 E-value=0.00024 Score=58.94 Aligned_cols=74 Identities=16% Similarity=0.065 Sum_probs=52.8
Q ss_pred EEEEccCCCCCCcEEEEEeC----------CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEE-CCCcE
Q psy13856 146 DVAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSV 213 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s-~D~~v 213 (271)
.+.++| ++..+..... .+.|.++|..+.+. ...+. .......++|+|||+ .++++. .++.|
T Consensus 271 ~~~~s~----d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 271 QVAYLK----SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred eEEECC----CCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 366777 4565555432 35799999988765 34443 233678999999999 777777 48999
Q ss_pred EEEEeCCCCceeEEEE
Q psy13856 214 SLWKENTDGAWQCITE 229 (271)
Q Consensus 214 ~iw~~~~~~~~~~~~~ 229 (271)
.++|..+. +.+.+
T Consensus 344 ~ViD~~t~---~vv~~ 356 (373)
T 2mad_H 344 HIYDAGAG---DQDQS 356 (373)
T ss_pred EEEECCCC---CEEee
Confidence 99999877 55555
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.39 E-value=1.6e-05 Score=71.63 Aligned_cols=158 Identities=9% Similarity=-0.046 Sum_probs=94.7
Q ss_pred cCCCCCCCEEE-----EccCCCeEEeccc--eeeeccccccccccceEEEEcCCCCeEEEEeCCCc-------------E
Q psy13856 29 ESPLRIGHTLI-----SCDTQAHIGIRST--ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEA-------------A 88 (271)
Q Consensus 29 ~~~~~~g~~l~-----s~s~d~~i~lwd~--~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~-------------i 88 (271)
..++|||++|| .|+.+..|++||+ -..+..+... .....++|+ |++.|+.++.+.. |
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 34567999888 4555578999998 2222223222 002578999 9999988887743 5
Q ss_pred EEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC-CCcceEEEEEccCCCCCCcEEEEEe---
Q psy13856 89 KHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCS--- 164 (271)
Q Consensus 89 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~~--- 164 (271)
++|++ .+.... . ..+..... |...+.++.|+| |+++|+...
T Consensus 211 ~~~~l---gt~~~~--------------------------~--~~v~~~~~~~~~~~~~~~~Sp----Dg~~l~~~~~~~ 255 (693)
T 3iuj_A 211 YFHRL---GTAQED--------------------------D--RLVFGAIPAQHHRYVGATVTE----DDRFLLISAANS 255 (693)
T ss_dssp EEEET---TSCGGG--------------------------C--EEEESCSGGGCCSEEEEEECT----TSCEEEEEEESS
T ss_pred EEEEC---CCCccc--------------------------c--eEEEecCCCCCeEEEEEEEcC----CCCEEEEEEccC
Confidence 55554 211110 0 23333333 455678899999 688774433
Q ss_pred -CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CC---CcEEEEEeCCCCc--eeE
Q psy13856 165 -QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GD---NSVSLWKENTDGA--WQC 226 (271)
Q Consensus 165 -~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D---~~v~iw~~~~~~~--~~~ 226 (271)
.++.++++|+.++... ...+..+....... |+++|..|+..+ .| +.|..+++..... |..
T Consensus 256 ~~~~~i~~~d~~~~~~~-~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~ 322 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAP-LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD 322 (693)
T ss_dssp SSCCEEEEEETTSTTCC-CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred CCCcEEEEEECCCCCCc-eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE
Confidence 2358999999776311 34455565555555 666665554444 33 5788888876543 544
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.39 E-value=0.00042 Score=55.38 Aligned_cols=170 Identities=9% Similarity=-0.021 Sum_probs=100.7
Q ss_pred CCCCCCCEEEEccCCCeEEeccc----eeeeccc-cccccccceEEEEcCCCCeEEEEeCC---------CcEEEEEeec
Q psy13856 30 SPLRIGHTLISCDTQAHIGIRST----ISLLQGS-VYLRRESNKAGALSPKLNRSATSSFH---------EAAKHLGTVQ 95 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d~~i~lwd~----~~~~~~h-~~~~~~~i~~~~~s~~~~~l~s~s~d---------~~i~~~d~~~ 95 (271)
.+.++|.++++. ++.|.+||. +..+... .......+.+++++|+|++.++...+ ..-.+|.+.
T Consensus 60 ~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d- 136 (297)
T 3g4e_A 60 ALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF- 136 (297)
T ss_dssp EEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC-
T ss_pred EECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE-
Confidence 344688865554 468888887 2222211 11111126789999999966654321 234566552
Q ss_pred CCCCceeecc---ce-eeEEEeeccceee------eEEEE-e---eCCceE---EeEEecCCCcceEEEEEccCCCCCCc
Q psy13856 96 SSSPACLQPK---YF-KLTVYSTKLTRIL------ILVRI-C---GGDKWI---EETKLENHSDWVRDVAWAPSWGLSKC 158 (271)
Q Consensus 96 ~~~~~~~~~~---~~-~~~~~~~~~~~l~------~~v~i-~---~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~ 158 (271)
..+...... .. ....++.+++.+. +.|.+ . .++... ....+..+......+++++ +++
T Consensus 137 -~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~----~G~ 211 (297)
T 3g4e_A 137 -PDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA----EGK 211 (297)
T ss_dssp -TTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT----TSC
T ss_pred -CCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC----CCC
Confidence 122222211 22 3344566666443 44554 2 333221 2223333445678899999 688
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEe-cCCCEEEEEEC
Q psy13856 159 MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSCG 209 (271)
Q Consensus 159 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~ 209 (271)
+.++....+.|.+||..+++. ...+..+...+++++|. |+++.|+.++.
T Consensus 212 lwva~~~~~~v~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEcCCCEEEEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 888888889999999987775 45555566789999998 88776665553
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.32 E-value=0.00017 Score=57.11 Aligned_cols=145 Identities=8% Similarity=-0.065 Sum_probs=98.9
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc---eeee--ccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceee
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST---ISLL--QGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~---~~~~--~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~ 103 (271)
....++|.++++...++.|.+||. +..+ ..+... +.++++.++++..++...++.|..++. . +..
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~g~l~v~~~~~~~v~~~d~---~-g~~-- 94 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAK----VMCLIVSSLGDIWFTENGANKIGKLSK---K-GGF-- 94 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCC----EEEEEECTTSCEEEEETTTTEEEEECT---T-SCE--
T ss_pred eeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCc----ceeEEECCCCCEEEEecCCCeEEEECC---C-CCe--
Confidence 334468888888877899999987 2211 122234 789999999987777766788888875 2 211
Q ss_pred ccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeee
Q psy13856 104 PKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF 183 (271)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 183 (271)
. ...+......+.++++++ ++.++++...++.|..+|.. +... ..
T Consensus 95 ----------------------------~-~~~~~~~~~~~~~i~~~~----~g~l~v~~~~~~~i~~~~~~-g~~~-~~ 139 (300)
T 2qc5_A 95 ----------------------------T-EYPLPQPDSGPYGITEGL----NGDIWFTQLNGDRIGKLTAD-GTIY-EY 139 (300)
T ss_dssp ----------------------------E-EEECSSTTCCEEEEEECS----TTCEEEEETTTTEEEEECTT-SCEE-EE
T ss_pred ----------------------------E-EecCCCCCCCCccceECC----CCCEEEEccCCCeEEEECCC-CCEE-Ec
Confidence 1 111122335678999998 58888887778899999987 4431 12
Q ss_pred eeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEe
Q psy13856 184 IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 184 ~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
.+......+..+++.++|.+.++...++.|..++.
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 22334457899999999997776666788988887
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.30 E-value=4.7e-05 Score=63.21 Aligned_cols=60 Identities=10% Similarity=0.152 Sum_probs=43.5
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEE-CCCcEEEEEeCCCCceeEEEEecc
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
+.|.+.|..+.+. ...+.. ...++.+++++|++ .|+++. .++.|.++|..++ +.+.+++.
T Consensus 311 ~~V~viD~~t~kv--~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~---k~~~~i~~ 372 (386)
T 3sjl_D 311 RFVVVLDAKTGER--LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG---EELRSVNQ 372 (386)
T ss_dssp EEEEEEETTTCCE--EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC---CEEEEECC
T ss_pred CEEEEEECCCCeE--EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC---cEEEEecC
Confidence 5789999988775 333221 23688999999986 666654 4899999999887 56666644
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.27 E-value=0.00052 Score=55.68 Aligned_cols=168 Identities=10% Similarity=-0.058 Sum_probs=101.9
Q ss_pred CCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc-----
Q psy13856 35 GHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK----- 105 (271)
Q Consensus 35 g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~----- 105 (271)
+.++++...++.|..||. ...+. .... +.+++|+++++++++. .+ .|.+||. .++......
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~----v~~i~~~~dg~l~v~~-~~-gl~~~d~---~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFM----GSALAKISDSKQLIAS-DD-GLFLRDT---ATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSC----EEEEEEEETTEEEEEE-TT-EEEEEET---TTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCc----ceEEEEeCCCeEEEEE-CC-CEEEEEC---CCCcEEEEeeCCCC
Confidence 557777777899999987 22222 2344 8899999999877654 44 4778886 444432211
Q ss_pred ----ceeeEEEeeccceeeeE---------EEE--eeCCceEEeEEecCCCcceEEEEEccCCCCCCcEE-EEEeCCCeE
Q psy13856 106 ----YFKLTVYSTKLTRILIL---------VRI--CGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-ASCSQDRKV 169 (271)
Q Consensus 106 ----~~~~~~~~~~~~~l~~~---------v~i--~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l-~s~~~dg~i 169 (271)
......+..+++.+++. ..| ..++. . ..+..+......++|+| +++.+ ++.+.++.|
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~--~-~~~~~~~~~~~~i~~s~----dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK--V-TKLFADISIPNSICFSP----DGTTGYFVDTKVNRL 203 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE--E-EEEEEEESSEEEEEECT----TSCEEEEEETTTCEE
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc--E-EEeeCCCcccCCeEEcC----CCCEEEEEECCCCEE
Confidence 11223344445554421 223 22442 2 22222334567899999 67655 455567899
Q ss_pred EEEEcC--CC-ceee---eeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 170 IIWTSN--DY-VTWT---PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 170 ~iwd~~--~~-~~~~---~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.+|+.. ++ .... ...+.........++++++|.+.++...++.|..|+.+
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 999986 44 2110 11222334567889999999988877777889999873
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.24 E-value=6.3e-05 Score=63.44 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=53.6
Q ss_pred EEEccCCCCCCcEEEEEe----------CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEE-CCCcEE
Q psy13856 147 VAWAPSWGLSKCMIASCS----------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS 214 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s-~D~~v~ 214 (271)
+.++| ++..+.... .++.|.+.|..+.+. ...+.. ....+.+.|+|+|+ .++++. .++.|.
T Consensus 324 va~s~----dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~Vs 396 (426)
T 3c75_H 324 TAYHR----QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLH 396 (426)
T ss_dssp EEEEG----GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcC----CCCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEE
Confidence 67888 455544432 135799999998775 333331 22578999999998 888888 489999
Q ss_pred EEEeCCCCceeEEEEe
Q psy13856 215 LWKENTDGAWQCITEM 230 (271)
Q Consensus 215 iw~~~~~~~~~~~~~~ 230 (271)
++|..+. +.+.++
T Consensus 397 VID~~t~---kvv~tI 409 (426)
T 3c75_H 397 IYDAATG---EELRSV 409 (426)
T ss_dssp EEETTTC---CEEEEE
T ss_pred EEECCCC---CEEEEe
Confidence 9999877 666665
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.07 E-value=0.00013 Score=65.59 Aligned_cols=186 Identities=7% Similarity=-0.116 Sum_probs=101.8
Q ss_pred ccCCCCCCCEEEEccCCC-------------eEEeccc-------eeeec--c-ccccccccceEEEEcCCCCeEEEEeC
Q psy13856 28 TESPLRIGHTLISCDTQA-------------HIGIRST-------ISLLQ--G-SVYLRRESNKAGALSPKLNRSATSSF 84 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~d~-------------~i~lwd~-------~~~~~--~-h~~~~~~~i~~~~~s~~~~~l~s~s~ 84 (271)
..... ||+.|+.++.|. .|.+|++ ...+. . |... ..++.|+|||++|+....
T Consensus 179 ~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~----~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 179 GISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR----YVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS----EEEEEECTTSCEEEEEEE
T ss_pred cEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE----EEEEEEcCCCCEEEEEEc
Confidence 44455 888888887764 3888887 11222 2 3334 568899999997754432
Q ss_pred ----CCcEEEEEeecCC-CCceeecc-ceeeEEEeeccceee---------eEEEE--eeCCceEEeEEecCCCcceEEE
Q psy13856 85 ----HEAAKHLGTVQSS-SPACLQPK-YFKLTVYSTKLTRIL---------ILVRI--CGGDKWIEETKLENHSDWVRDV 147 (271)
Q Consensus 85 ----d~~i~~~d~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~---------~~v~i--~~~~~~~~~~~~~~h~~~v~~v 147 (271)
+..++++++.++. ....+... ......++.++..+. ..|.. ...+.....+.+..|...+.
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-- 331 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-- 331 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--
Confidence 2478888873211 11111111 111222444444443 22333 12221111234555655554
Q ss_pred EEccCCCCCCcEEEEEeC-CC--eEEEEEcCCCceeeeeee-ccCCCCeEEEEEecCCCEEEEEECC----CcEEEEEeC
Q psy13856 148 AWAPSWGLSKCMIASCSQ-DR--KVIIWTSNDYVTWTPFIM-NTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWKEN 219 (271)
Q Consensus 148 ~~~p~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~-~~h~~~v~~v~~~~~g~~l~s~s~D----~~v~iw~~~ 219 (271)
.|+| ++..|+.... ++ .|++|++.... ...+ ....+.+..+.+++++..++....+ ++++.||+.
T Consensus 332 ~~s~----~g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 332 TVHS----GSGYLFAEYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EEEE----ETTEEEEEEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEE----ECCEEEEEEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 7888 4666655554 44 68888887543 2222 2344567778888887766655444 789999987
Q ss_pred CCCceeEEE
Q psy13856 220 TDGAWQCIT 228 (271)
Q Consensus 220 ~~~~~~~~~ 228 (271)
++ ....+.
T Consensus 405 ~g-~~~~l~ 412 (693)
T 3iuj_A 405 SG-AISLYR 412 (693)
T ss_dssp TC-CEEEEE
T ss_pred CC-eEEEEE
Confidence 54 333333
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.07 E-value=0.00027 Score=58.71 Aligned_cols=151 Identities=10% Similarity=0.044 Sum_probs=92.9
Q ss_pred ccCCCCCCCEEEEccC-----CCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEe----------CCCc
Q psy13856 28 TESPLRIGHTLISCDT-----QAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSS----------FHEA 87 (271)
Q Consensus 28 ~~~~~~~g~~l~s~s~-----d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s----------~d~~ 87 (271)
...|.|+++.+..... ++.|.+.|. +..+..-.. . .++++|||++++.++ .++.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-----P-~va~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-----P-NPVVADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-----C-EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-----C-cEEECCCCCEEEEEcccccccccCCCCCE
Confidence 3567789987766654 679999998 333332222 2 499999999887765 3677
Q ss_pred EEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC--
Q psy13856 88 AKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-- 165 (271)
Q Consensus 88 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~-- 165 (271)
|.+||. .+.+..... .+ ..+ . .. .....-..+.++| |++++..+..
T Consensus 111 VsviD~---~t~~v~~~I------------------~v-~~g--~---r~-~~g~~P~~~a~sp----DGk~lyVan~~~ 158 (386)
T 3sjl_D 111 VEVFDP---VTLLPTADI------------------EL-PDA--P---RF-LVGTYPWMTSLTP----DGKTLLFYQFSP 158 (386)
T ss_dssp EEEECT---TTCCEEEEE------------------EE-TTC--C---CC-CBSCCGGGEEECT----TSSEEEEEECSS
T ss_pred EEEEEC---CCCeEEEEE------------------EC-CCc--c---cc-ccCCCCceEEEcC----CCCEEEEEEcCC
Confidence 889997 444332210 00 000 0 00 0112345799999 7888877763
Q ss_pred CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 166 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
++.|.++|..+.+. ...+..- +. ...+....+.+++.+.||++.+.++...
T Consensus 159 ~~~VsVID~~t~~v--v~tI~v~-g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~ 209 (386)
T 3sjl_D 159 APAVGVVDLEGKAF--KRMLDVP-DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTE 209 (386)
T ss_dssp SCEEEEEETTTTEE--EEEEECC-SE--EEEEEEETTEEEEEETTSCEEEEECCSS
T ss_pred CCeEEEEECCCCcE--EEEEECC-Cc--ceeecCCCceeEEECCCCCEEEEECCCC
Confidence 68999999999775 3333221 11 1223334456667778888888887653
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=0.00013 Score=59.66 Aligned_cols=152 Identities=10% Similarity=0.023 Sum_probs=87.0
Q ss_pred CCCCCEEEEcc--CCCeEEeccc----eeeec---cccccccccceEEEEcCCCCeEEEEeC-----CCcEEEEEeecCC
Q psy13856 32 LRIGHTLISCD--TQAHIGIRST----ISLLQ---GSVYLRRESNKAGALSPKLNRSATSSF-----HEAAKHLGTVQSS 97 (271)
Q Consensus 32 ~~~g~~l~s~s--~d~~i~lwd~----~~~~~---~h~~~~~~~i~~~~~s~~~~~l~s~s~-----d~~i~~~d~~~~~ 97 (271)
.++|+++++.. .++.++||.+ +..+. .........+.++++++++++.++-.. +..|.+||. .
T Consensus 25 ~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~---~ 101 (343)
T 2qe8_A 25 TPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT---L 101 (343)
T ss_dssp CTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET---T
T ss_pred CCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC---C
Confidence 35888888853 2343555554 11111 000011223889999999876555433 567888887 4
Q ss_pred CCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe---CCCeEEEEEc
Q psy13856 98 SPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS---QDRKVIIWTS 174 (271)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~---~dg~i~iwd~ 174 (271)
+++.+.....+ .....+......++++|. ++..+++.. .++.|.+||.
T Consensus 102 tg~~~~~~~~~--------------------------~~~~~~~~~~~~v~vd~~---~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 102 NNQLSRVIYLP--------------------------PPITLSNSFVNDLAVDLI---HNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp TTEEEEEEECC--------------------------TTTSCTTCCCCEEEEETT---TTEEEEEECCSGGGCEEEEEET
T ss_pred CCeEEEEEECC--------------------------hhhcccccccceEEEecC---CCEEEEEcCccCCCCeEEEEEC
Confidence 44322210000 000123345678999984 355556655 6789999999
Q ss_pred CCCceeeeeeeccC-----------------------------CCCeEEEEEecCCCEEEEEECCCcEEEEEe
Q psy13856 175 NDYVTWTPFIMNTF-----------------------------DDVVWNVSWSLTGDILTVSCGDNSVSLWKE 218 (271)
Q Consensus 175 ~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~ 218 (271)
.+++. ...+.+| ...++.++|+|+|+.|+.+..++. ++|.+
T Consensus 153 ~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~ 222 (343)
T 2qe8_A 153 QTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRI 222 (343)
T ss_dssp TTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEE
T ss_pred CCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEE
Confidence 87654 2222221 123688999999998888877653 44444
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.03 E-value=0.00083 Score=54.49 Aligned_cols=108 Identities=6% Similarity=-0.139 Sum_probs=69.8
Q ss_pred ceEEEEcCCCCeEEEE-eCCCcEEEEEeecCCCC-ceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcce
Q psy13856 67 NKAGALSPKLNRSATS-SFHEAAKHLGTVQSSSP-ACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWV 144 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~-s~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v 144 (271)
...++|+|+++.++.+ +.++.|.+|+... .++ .... . .....+.......
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~-~~Gl~~~~-------------------------~--~~~~~~~~~~~~p 232 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDA-RTGLPTGK-------------------------A--EVFIDSTGIKGGM 232 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCT-TTCCBSSC-------------------------C--EEEEECTTSSSEE
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEccc-ccCCcccC-------------------------c--eEEEECCCCCCCC
Confidence 5689999999876544 4568888888620 022 1100 0 1122222333456
Q ss_pred EEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEe-cCCCEEEEEEC
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSCG 209 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~ 209 (271)
..+++++ ++.++++...++.|.+||. +++. ...+..+...+.+++|. +++..|+.++.
T Consensus 233 ~gi~~d~----~G~lwva~~~~~~v~~~d~-~g~~--~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 233 DGSVCDA----EGHIWNARWGEGAVDRYDT-DGNH--IARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEECT----TSCEEEEEETTTEEEEECT-TCCE--EEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CeeEECC----CCCEEEEEeCCCEEEEECC-CCCE--EEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 7899998 5888887777789999998 4443 44455555679999998 88876655543
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.98 E-value=0.00082 Score=56.60 Aligned_cols=161 Identities=10% Similarity=-0.085 Sum_probs=98.6
Q ss_pred CCCCCCCEEEEccCC------CeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEe---------------
Q psy13856 30 SPLRIGHTLISCDTQ------AHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSS--------------- 83 (271)
Q Consensus 30 ~~~~~g~~l~s~s~d------~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s--------------- 83 (271)
.+.|+| +++++..+ +.|.+.|. +..+...... ..--+.+.|+|+++.+++..
T Consensus 144 ~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~-~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~ 221 (462)
T 2ece_A 144 HCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD-QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH 221 (462)
T ss_dssp EECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT-CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT
T ss_pred eECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC-ccccceEEECCCCCEEEEccCcCccccccccchhh
Confidence 445788 87777766 78999997 3344311111 00135688999999888885
Q ss_pred ----CCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC--CCcceEEEEE--ccCCCC
Q psy13856 84 ----FHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN--HSDWVRDVAW--APSWGL 155 (271)
Q Consensus 84 ----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~--h~~~v~~v~~--~p~~~~ 155 (271)
.+.+|.+||. .+++. +.++.- .......+.| +|
T Consensus 222 ~~~~~~d~V~v~D~---~~~k~--------------------------------~~tI~vg~~g~~P~~i~f~~~P---- 262 (462)
T 2ece_A 222 LKDRYGNRIHFWDL---RKRKR--------------------------------IHSLTLGEENRMALELRPLHDP---- 262 (462)
T ss_dssp HHHHSCCEEEEEET---TTTEE--------------------------------EEEEESCTTEEEEEEEEECSST----
T ss_pred hhhccCCEEEEEEC---CCCcE--------------------------------eeEEecCCCCCccceeEeeECC----
Confidence 3678889997 33222 222221 1122334545 88
Q ss_pred CCcEEEEEe------CCCeEEEEEcCCCceeeeeee--ccC----------------CCCeEEEEEecCCCEEEEEEC-C
Q psy13856 156 SKCMIASCS------QDRKVIIWTSNDYVTWTPFIM--NTF----------------DDVVWNVSWSLTGDILTVSCG-D 210 (271)
Q Consensus 156 ~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~--~~h----------------~~~v~~v~~~~~g~~l~s~s~-D 210 (271)
++.++..++ .+++|.+|....+.....+.+ ... ......+.+++||++|.++.. .
T Consensus 263 dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 263 TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 577666655 567888777655321111111 110 234678999999999988876 6
Q ss_pred CcEEEEEeCCCCceeEEEEec
Q psy13856 211 NSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 211 ~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+.|.+||+...+..+.+..+.
T Consensus 343 d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 343 GEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp TEEEEEECSSTTSCEEEEEEE
T ss_pred CEEEEEEecCCCCcEEEEEEE
Confidence 899999997555556666553
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.98 E-value=0.00072 Score=54.20 Aligned_cols=133 Identities=11% Similarity=-0.011 Sum_probs=79.9
Q ss_pred CCCCCEEEE----ccC-------------CCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCC-----
Q psy13856 32 LRIGHTLIS----CDT-------------QAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFH----- 85 (271)
Q Consensus 32 ~~~g~~l~s----~s~-------------d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d----- 85 (271)
.++|.++++ |.. .+.|..+|. +..+. .... ...++|+||++.|+.+...
T Consensus 139 d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~----p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 139 ARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH----PNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp CTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS----EEEEEECTTSSEEEEEECCC---C
T ss_pred CCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC----CcceEEcCCCCEEEEEecCCcCCC
Confidence 468888886 432 245666665 22222 2333 5789999999977777654
Q ss_pred -CcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEe
Q psy13856 86 -EAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 164 (271)
Q Consensus 86 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~ 164 (271)
+.|+.|+.. ... +.. . .... .........+++++ +|++.++.
T Consensus 214 ~~~i~~~~~~---~~~-l~~------------------------~--~~~~--~~~~~~pdgi~~d~----~G~lwv~~- 256 (305)
T 3dr2_A 214 SVEITAFAWR---DGA-LHD------------------------R--RHFA--SVPDGLPDGFCVDR----GGWLWSSS- 256 (305)
T ss_dssp CCEEEEEEEE---TTE-EEE------------------------E--EEEE--CCSSSCCCSEEECT----TSCEEECC-
T ss_pred CCEEEEEEec---CCC-ccC------------------------C--eEEE--ECCCCCCCeEEECC----CCCEEEec-
Confidence 678888872 111 100 0 1111 11223345688898 57755554
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 211 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~ 211 (271)
.+ .|.+|+.. ++. ...+.... .+.+++|++++..|..++.++
T Consensus 257 ~~-gv~~~~~~-g~~--~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 257 GT-GVCVFDSD-GQL--LGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp SS-EEEEECTT-SCE--EEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred CC-cEEEECCC-CCE--EEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 44 49999984 343 33343333 588899999998888887664
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.95 E-value=0.00038 Score=57.58 Aligned_cols=78 Identities=12% Similarity=-0.053 Sum_probs=54.3
Q ss_pred EEEccCCCCCCcEEEEE-e---C-----CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCC-EEEEEE-CCCcEEE
Q psy13856 147 VAWAPSWGLSKCMIASC-S---Q-----DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVSL 215 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~-~---~-----dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s-~D~~v~i 215 (271)
+.++| |+..+..+ . . ++.+.++|..+.+. ...+... .....++|+|||+ .+++.. .++.|.+
T Consensus 269 v~~s~----dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 269 VAKLK----NTDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp EEEET----TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred eEEcC----CCCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEE
Confidence 67888 56655543 3 2 23566999998775 3333322 2578999999997 566666 5999999
Q ss_pred EEeCCCCceeEEEEecccc
Q psy13856 216 WKENTDGAWQCITEMGKTS 234 (271)
Q Consensus 216 w~~~~~~~~~~~~~~~~~~ 234 (271)
+|..+. +.+.++....
T Consensus 342 ID~~t~---kvv~~I~vg~ 357 (368)
T 1mda_H 342 YDAASD---QDQSSVELDK 357 (368)
T ss_dssp EESSSC---EEEEECCCCS
T ss_pred EECCCC---cEEEEEECCC
Confidence 999877 7777776543
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.83 E-value=0.0031 Score=52.22 Aligned_cols=146 Identities=7% Similarity=-0.012 Sum_probs=87.7
Q ss_pred CCCCCCCEEEEccC--CC---eEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEe----------CCCcEE
Q psy13856 30 SPLRIGHTLISCDT--QA---HIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSS----------FHEAAK 89 (271)
Q Consensus 30 ~~~~~g~~l~s~s~--d~---~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s----------~d~~i~ 89 (271)
.|.++++++..... .. +|.++|. +..+.. ... . .++|+||+++++.+. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-g~~----p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-GFL----P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC-CCC----C-CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 44478886666653 33 7899997 222221 112 3 899999999988875 367788
Q ss_pred EEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC--CC
Q psy13856 90 HLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ--DR 167 (271)
Q Consensus 90 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~--dg 167 (271)
++|. .+.+..... .+.... ... +...-..+.|+| |+++++.+.. ++
T Consensus 101 viD~---~t~~~~~~i------------------~~~~~~------~~~-~g~~p~~~~~sp----DG~~l~v~n~~~~~ 148 (373)
T 2mad_H 101 VFDP---VTFLPIADI------------------ELPDAP------RFD-VGPYSWMNANTP----NNADLLFFQFAAGP 148 (373)
T ss_pred EEEC---CCCcEEEEE------------------ECCCcc------ccc-cCCCccceEECC----CCCEEEEEecCCCC
Confidence 8987 333322210 000000 000 112345799999 7998888774 57
Q ss_pred eEEEEEcCCCceeeeee-eccCCCCeEEEEEecCC-CEEEEEECCCcEEEEEeCCC
Q psy13856 168 KVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 168 ~i~iwd~~~~~~~~~~~-~~~h~~~v~~v~~~~~g-~~l~s~s~D~~v~iw~~~~~ 221 (271)
.|.++| .+++. ... +. ... ++.+.|++ ..+++.+.||++.+++. ++
T Consensus 149 ~v~viD-~t~~~--~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 149 AVGLVV-QGGSS--DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred eEEEEE-CCCCE--EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 899999 88764 333 22 222 24455554 45566667888888888 54
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.71 E-value=0.0031 Score=53.17 Aligned_cols=152 Identities=13% Similarity=0.066 Sum_probs=96.8
Q ss_pred CCCC-EEEEccCCCeEEeccc---------eeeec------ccc-ccccccceEEEEcCCCCeEEEEeCC------CcEE
Q psy13856 33 RIGH-TLISCDTQAHIGIRST---------ISLLQ------GSV-YLRRESNKAGALSPKLNRSATSSFH------EAAK 89 (271)
Q Consensus 33 ~~g~-~l~s~s~d~~i~lwd~---------~~~~~------~h~-~~~~~~i~~~~~s~~~~~l~s~s~d------~~i~ 89 (271)
.+++ ++++|-.++.|.++|+ .+++. ... .. ...+..+|+| .++++..+ +.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~----Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR----LHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE----EEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCc----ccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 5565 5677888899999998 22221 001 12 3467788999 66666555 5676
Q ss_pred EEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC--CC-cceEEEEEccCCCCCCcEEEEEe--
Q psy13856 90 HLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN--HS-DWVRDVAWAPSWGLSKCMIASCS-- 164 (271)
Q Consensus 90 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~--h~-~~v~~v~~~p~~~~~~~~l~s~~-- 164 (271)
++|. .+.+. +..... .. ..-..+.|+| +++.+++..
T Consensus 168 vlD~---~T~~v--------------------------------~~~~~~~~~~~~~~Yd~~~~p----~~~~mvsS~wg 208 (462)
T 2ece_A 168 MLDH---YSFEP--------------------------------LGKWEIDRGDQYLAYDFWWNL----PNEVLVSSEWA 208 (462)
T ss_dssp EECT---TTCCE--------------------------------EEECCSBCTTCCCCCCEEEET----TTTEEEECBCC
T ss_pred EEEC---CCCeE--------------------------------EEEEccCCCCccccceEEECC----CCCEEEEccCc
Confidence 7776 33332 222221 11 2234688899 688888774
Q ss_pred -----------------CCCeEEEEEcCCCceeeeeeecc--CCCCeEEEEE--ecCCCEEEEEE------CCCcEEEEE
Q psy13856 165 -----------------QDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSW--SLTGDILTVSC------GDNSVSLWK 217 (271)
Q Consensus 165 -----------------~dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~v~~--~~~g~~l~s~s------~D~~v~iw~ 217 (271)
.+.+|.+||+.+.+. ...+.. .......+.| +|+++++.+++ .+++|.+|.
T Consensus 209 ~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 209 VPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp CHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE--EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred CccccccccchhhhhhccCCEEEEEECCCCcE--eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 478999999998654 333332 1233455655 99999888777 467899988
Q ss_pred eCCCCceeEEEEec
Q psy13856 218 ENTDGAWQCITEMG 231 (271)
Q Consensus 218 ~~~~~~~~~~~~~~ 231 (271)
.+. +.|+..+.+.
T Consensus 287 ~d~-g~~~~~~vId 299 (462)
T 2ece_A 287 YED-GKWNAEKVIE 299 (462)
T ss_dssp EET-TEEEEEEEEE
T ss_pred ecC-CceeEEEEEe
Confidence 875 7887777653
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.65 E-value=0.0053 Score=48.20 Aligned_cols=150 Identities=3% Similarity=-0.059 Sum_probs=89.3
Q ss_pred ceEEEEcCCCCeEEEEeC--CCcEEEEEeecCCCCceeeccc-----eeeEEEeeccceee------eEEEEeeCCceEE
Q psy13856 67 NKAGALSPKLNRSATSSF--HEAAKHLGTVQSSSPACLQPKY-----FKLTVYSTKLTRIL------ILVRICGGDKWIE 133 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~--d~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~------~~v~i~~~~~~~~ 133 (271)
...++|++++...++.+. ++.|+++|. .+++.+.... +.. -.+..++.+. +.+.+.+....+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~---~tg~v~~~i~l~~~~fge-Gi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVAL---QTGKVENIHKMDDSYFGE-GLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEET---TTCCEEEEEECCTTCCEE-EEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEEC---CCCCEEEEEecCCCcceE-EEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 468999998755555443 679999998 7777776542 121 2223343333 5566522223356
Q ss_pred eEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec--cCC---CCeEEEEEecCCCEEEEEE
Q psy13856 134 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFD---DVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 134 ~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~h~---~~v~~v~~~~~g~~l~s~s 208 (271)
+..+.--...-+. +++ |+..+..+..++.|.++|..+.+. ...+. ... ..++.+.|. +|...+...
T Consensus 99 ~~~i~~g~~~g~g--lt~----Dg~~l~vs~gs~~l~viD~~t~~v--~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 99 IKNFTHQMKDGWG--LAT----DGKILYGSDGTSILYEIDPHTFKL--IKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp EEEEECCSSSCCE--EEE----CSSSEEEECSSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EEEEECCCCCeEE--EEE----CCCEEEEECCCCeEEEEECCCCcE--EEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 6666422122233 444 344444445688999999988664 22222 121 246788888 776555555
Q ss_pred CCCcEEEEEeCCCCceeEEEEecc
Q psy13856 209 GDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 209 ~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
.++.|.+.|+.++ +.+.++.-
T Consensus 170 ~~~~V~vID~~tg---~V~~~I~~ 190 (266)
T 2iwa_A 170 QTDCIARISAKDG---TLLGWILL 190 (266)
T ss_dssp TSSEEEEEETTTC---CEEEEEEC
T ss_pred CCCeEEEEECCCC---cEEEEEEC
Confidence 6789999999887 56666654
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.58 E-value=0.01 Score=53.27 Aligned_cols=59 Identities=8% Similarity=0.160 Sum_probs=42.6
Q ss_pred CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+.|..||..+++. .-.. .+..+++...+...+..++.++.|+.+++||..++ +.+.++.
T Consensus 457 g~l~A~D~~tG~~--~W~~-~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG---~~lw~~~ 515 (677)
T 1kb0_A 457 GRLLAWDPVAQKA--AWSV-EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG---EKLWEAP 515 (677)
T ss_dssp EEEEEEETTTTEE--EEEE-EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC---CEEEEEE
T ss_pred cEEEEEeCCCCcE--Eeec-CCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC---ceeeeee
Confidence 7899999998874 2222 23344555566778888999999999999999988 4444443
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.42 E-value=0.0069 Score=49.34 Aligned_cols=122 Identities=8% Similarity=-0.023 Sum_probs=76.1
Q ss_pred ceEEEEcCCCCeEEEEe--CCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcce
Q psy13856 67 NKAGALSPKLNRSATSS--FHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWV 144 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v 144 (271)
+..++++|+|+.+++.. .++.+++|.+. .++... ++. . . ....+|-..+
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~---~g~~~~---~p~-------------------~--~--~~~~~~~~~p 69 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELT---QDGLIP---FPP-------------------Q--S--GNAIITFDTV 69 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEE---TTEEEE---SCC-------------------C--C--SSCCCCCSCE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEEC---CCCeec---CCC-------------------c--c--cCcccceeEe
Confidence 78999999999888864 23435566652 121110 000 0 0 0112456788
Q ss_pred EEEEEccCCCCCCcEEEEEeC-----CCeEEEEEcCCCceeeeeeec----cCCCCeEEEEEecCC-CEEEEEE---CCC
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQ-----DRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTG-DILTVSC---GDN 211 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~----~h~~~v~~v~~~~~g-~~l~s~s---~D~ 211 (271)
.+++++| +++++++-.. +..|.+||..+++......+. .+...+..+++++++ ..+++.. .++
T Consensus 70 ~gv~~d~----~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 70 LGIKSDG----NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp EEEEECS----SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eEEEEcC----CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 9999999 5776665543 578999999887642111221 123456899999864 4445554 578
Q ss_pred cEEEEEeCCC
Q psy13856 212 SVSLWKENTD 221 (271)
Q Consensus 212 ~v~iw~~~~~ 221 (271)
.|.+||+.++
T Consensus 146 ~i~v~d~~~g 155 (343)
T 2qe8_A 146 ALIRVDLQTG 155 (343)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCCC
Confidence 9999999866
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.41 E-value=0.021 Score=44.57 Aligned_cols=148 Identities=10% Similarity=0.024 Sum_probs=87.8
Q ss_pred CCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEE-EeCCCcEEEEEeecCCCCceeeccce
Q psy13856 34 IGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSAT-SSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s-~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
++.++++.+.+|.|+.+|+ +..+ -... .+.....+++..|.. .-.++.+.++|. .+.+
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~----~FgeGit~~g~~Ly~ltw~~~~v~V~D~---~Tl~------- 127 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME--RLGN----IFAEGLASDGERLYQLTWTEGLLFTWSG---MPPQ------- 127 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTT----CCEEEEEECSSCEEEEESSSCEEEEEET---TTTE-------
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCC----cceeEEEEeCCEEEEEEccCCEEEEEEC---CcCc-------
Confidence 5678888899999999998 2222 1112 333223334444444 446778888887 3333
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT 187 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 187 (271)
.+.++.- ...-+.+++ |+..|+.+..++.|.++|..+.+.........
T Consensus 128 -------------------------~~~ti~~-~~eGwGLt~------Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 128 -------------------------RERTTRY-SGEGWGLCY------WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp -------------------------EEEEEEC-SSCCCCEEE------ETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred -------------------------EEEEEeC-CCceeEEec------CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 3333332 122245554 34555555568999999998876521112222
Q ss_pred CC---CCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEeccc
Q psy13856 188 FD---DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 188 h~---~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
+. ..++.+.|. +|.+.+..-.++.|.+.|+.++ +.+..+.-.
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG---~V~~~Idl~ 220 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG---TVVGVIDAS 220 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC---BEEEEEECH
T ss_pred CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC---cEEEEEECC
Confidence 22 245677777 7765555546889999999988 666666553
No 229
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.30 E-value=0.013 Score=51.16 Aligned_cols=86 Identities=9% Similarity=0.017 Sum_probs=57.0
Q ss_pred ceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCcee---------eeeeeccCCCCeEEEEEecCCCEEEE-EECCC
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTW---------TPFIMNTFDDVVWNVSWSLTGDILTV-SCGDN 211 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~---------~~~~~~~h~~~v~~v~~~~~g~~l~s-~s~D~ 211 (271)
...++.++| ||++++.++ .+.+|.++|+.+.+.. .......-......++|+|+| ++.+ .--|+
T Consensus 278 ~PhGv~~sP----DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~lds 352 (595)
T 1fwx_A 278 NPHGCNMAP----DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDS 352 (595)
T ss_dssp SCCCEEECT----TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTT
T ss_pred CceEEEEcC----CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCC
Confidence 456899999 688665544 6889999999864200 011111223467889999999 5554 44599
Q ss_pred cEEEEEeCCC-------CceeEEEEeccc
Q psy13856 212 SVSLWKENTD-------GAWQCITEMGKT 233 (271)
Q Consensus 212 ~v~iw~~~~~-------~~~~~~~~~~~~ 233 (271)
+|..|+++.. ..++.+.++..+
T Consensus 353 qV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 353 QVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp EEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred cEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 9999999751 124667777654
No 230
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.28 E-value=0.0055 Score=55.69 Aligned_cols=157 Identities=10% Similarity=-0.012 Sum_probs=82.5
Q ss_pred CCC-CCCCEEEEcc-----CCCeEEeccc--e-eeeccccccccccceEEEEcCCCCeEEEEeCCC-----cEEEEEeec
Q psy13856 30 SPL-RIGHTLISCD-----TQAHIGIRST--I-SLLQGSVYLRRESNKAGALSPKLNRSATSSFHE-----AAKHLGTVQ 95 (271)
Q Consensus 30 ~~~-~~g~~l~s~s-----~d~~i~lwd~--~-~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~-----~i~~~d~~~ 95 (271)
..+ |||++||-+. ....|+++|+ - ..+..+-.. ...+++|+||++.|+....|. .|+.+++
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l-- 254 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM-- 254 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEET--
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC--
Confidence 345 7999877432 2235888887 2 222221111 134789999999887776552 2333443
Q ss_pred CCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC---CCeEEEE
Q psy13856 96 SSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ---DRKVIIW 172 (271)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~---dg~i~iw 172 (271)
.++... . ..+..- ........+.|+| |+++|+..+. ...|.++
T Consensus 255 -gt~~~~--------------------------~--~lv~~~-~~~~~~~~~~~Sp----Dg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 255 -GKLQSE--------------------------D--VCLYEE-HNPLFSAFMYKAA----DTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp -TSCGGG--------------------------C--EEEEEC-CCTTCEEEEEECT----TSSEEEEEEECSSCEEEEEE
T ss_pred -CCCchh--------------------------c--EEEEec-CCCceEEEEEECC----CCCEEEEEecCCCCceEEEE
Confidence 111100 0 111111 1233456789999 7887776552 4568888
Q ss_pred EcCCCceeee--eee-ccCCCCeEEEEEecCCCEEEEEECC--C--cEEEEEeCCCCceeE
Q psy13856 173 TSNDYVTWTP--FIM-NTFDDVVWNVSWSLTGDILTVSCGD--N--SVSLWKENTDGAWQC 226 (271)
Q Consensus 173 d~~~~~~~~~--~~~-~~h~~~v~~v~~~~~g~~l~s~s~D--~--~v~iw~~~~~~~~~~ 226 (271)
|+.++... . ..+ ....+..+++.|+..+.+++.+..+ + .|..+++.+.+.|..
T Consensus 301 d~~~~~~~-~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 301 DLRKGNAH-NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp ESSSCTTC-CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred ECCCCCCC-ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 88765211 2 222 3344566666665544445554444 2 455556543234543
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.28 E-value=0.023 Score=44.25 Aligned_cols=161 Identities=7% Similarity=-0.003 Sum_probs=92.9
Q ss_pred eeeeccccccccccceEEEEcCCCCeEEEEeCCC--cEEEEEeecCCCCceeeccce-----eeEEEeeccceee-----
Q psy13856 53 ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHE--AAKHLGTVQSSSPACLQPKYF-----KLTVYSTKLTRIL----- 120 (271)
Q Consensus 53 ~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~--~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~----- 120 (271)
++.+ .|... .-...+.|+ ++.+..+.+.++ +|+.+|. .+++.+..... ...+ +..++.+.
T Consensus 34 v~~~-phd~~--~ftqGL~~~-~~~LyestG~~g~S~v~~vD~---~Tgkv~~~~~l~~~~FgeGi-t~~g~~ly~ltw~ 105 (262)
T 3nol_A 34 VHSY-PHDTK--AFTEGFFYR-NGYFYESTGLNGRSSIRKVDI---ESGKTLQQIELGKRYFGEGI-SDWKDKIVGLTWK 105 (262)
T ss_dssp EEEE-ECCTT--CEEEEEEEE-TTEEEEEEEETTEEEEEEECT---TTCCEEEEEECCTTCCEEEE-EEETTEEEEEESS
T ss_pred EEEe-cCCCC--cccceEEEE-CCEEEEECCCCCCceEEEEEC---CCCcEEEEEecCCccceeEE-EEeCCEEEEEEee
Confidence 4554 45443 003689998 677777777766 8999998 77777665522 1111 22233332
Q ss_pred -eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCC---CCeEEEE
Q psy13856 121 -ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD---DVVWNVS 196 (271)
Q Consensus 121 -~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~---~~v~~v~ 196 (271)
+.+.+.+....+.+.++.-. ..=+.++ + |+..|+....++.|.++|..+.+........... ..++.+.
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~-~eG~glt--~----dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYD-GEGWGLT--H----NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECS-SCCCCEE--E----CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred CCEEEEEECccCcEEEEEECC-CCceEEe--c----CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 44555233333556665532 2223444 3 3455555555788999999887652111121122 3456677
Q ss_pred EecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 197 WSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 197 ~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
|. +|.+.+..-.++.|.+.|+.++ +.+..+..
T Consensus 179 ~~-~G~lyan~w~~~~I~vIDp~tG---~V~~~Id~ 210 (262)
T 3nol_A 179 WV-DGEIFANVWQTNKIVRIDPETG---KVTGIIDL 210 (262)
T ss_dssp EE-TTEEEEEETTSSEEEEECTTTC---BEEEEEEC
T ss_pred EE-CCEEEEEEccCCeEEEEECCCC---cEEEEEEC
Confidence 76 6766655556889999999988 66666654
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.23 E-value=0.047 Score=42.55 Aligned_cols=163 Identities=10% Similarity=0.027 Sum_probs=94.5
Q ss_pred CCCEEEEccCCC--eEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEe-CCCcEEEEEeecCCCCceeecc
Q psy13856 34 IGHTLISCDTQA--HIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSS-FHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 34 ~g~~l~s~s~d~--~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s-~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
++.++.+.+.+| .|+.+|+ +..+.-. .. .+.....+++..|.... .++.+.++|. .+.+.+..+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~----~FgeGit~~g~~ly~ltw~~~~v~v~D~---~t~~~~~ti 123 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KR----YFGEGISDWKDKIVGLTWKNGLGFVWNI---RNLRQVRSF 123 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TT----CCEEEEEEETTEEEEEESSSSEEEEEET---TTCCEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-Cc----cceeEEEEeCCEEEEEEeeCCEEEEEEC---ccCcEEEEE
Confidence 667788888776 8999998 2222221 12 34433444455555554 5788989998 777777666
Q ss_pred ceee--EEEeeccceee-----eEEEEeeCCceEEeEEecC--CC---cceEEEEEccCCCCCCcEEEEEeCCCeEEEEE
Q psy13856 106 YFKL--TVYSTKLTRIL-----ILVRICGGDKWIEETKLEN--HS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 173 (271)
Q Consensus 106 ~~~~--~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~--h~---~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd 173 (271)
.++. .-.+.+++.+. +.+.+.+...++....+.- .. ..++.+.|. ++.+++..-.+..|.+.|
T Consensus 124 ~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-----~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 124 NYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-----DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp ECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-----TTEEEEEETTSSEEEEEC
T ss_pred ECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-----CCEEEEEEccCCeEEEEE
Confidence 4321 12223344443 4455523222234443322 11 234456775 367777776788999999
Q ss_pred cCCCceeeeeeecc--------C--CCCeEEEEEecCCCEEEEEEC
Q psy13856 174 SNDYVTWTPFIMNT--------F--DDVVWNVSWSLTGDILTVSCG 209 (271)
Q Consensus 174 ~~~~~~~~~~~~~~--------h--~~~v~~v~~~~~g~~l~s~s~ 209 (271)
.++++....-.+.+ + ....+.++|+|+++.|+..+.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99987521112211 1 235689999998877766654
No 233
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.19 E-value=0.0052 Score=51.75 Aligned_cols=77 Identities=9% Similarity=0.030 Sum_probs=55.5
Q ss_pred EEEEccCCCCCCcEEEEEe----------CCCeEEEEEcCCCceeeeeeec-c------CCCCeEEEEEecCCCEEEEEE
Q psy13856 146 DVAWAPSWGLSKCMIASCS----------QDRKVIIWTSNDYVTWTPFIMN-T------FDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~-~------h~~~v~~v~~~~~g~~l~s~s 208 (271)
.+.++| |+++++.+. .++.|.++|..+.+. ...+. + .......+.|+|||++++.+.
T Consensus 122 gia~Sp----Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v--v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 122 HPVAAE----DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP--IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp EEEECT----TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE--EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred ceEECC----CCCEEEEEeccccccccCCCCCEEEEEECCCCcE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence 799999 677776665 467899999998775 33322 1 112345788999999999887
Q ss_pred C--CCcEEEEEeCCCCceeEEEEec
Q psy13856 209 G--DNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 209 ~--D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
. ++.|.+.|..+. +.+.++.
T Consensus 196 ~~~~~~VsVID~~t~---kvv~~I~ 217 (426)
T 3c75_H 196 FSPAPAVGVVDLEGK---TFDRMLD 217 (426)
T ss_dssp CSSSCEEEEEETTTT---EEEEEEE
T ss_pred cCCCCeEEEEECCCC---eEEEEEE
Confidence 4 578999999877 4444443
No 234
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.18 E-value=0.025 Score=47.75 Aligned_cols=73 Identities=7% Similarity=0.029 Sum_probs=50.0
Q ss_pred eEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEE-ECCCcEEEEEeCC
Q psy13856 144 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENT 220 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~~~~ 220 (271)
...++++|. ++.++++-..++.|..++............. .....+.++|+|+|++|..+ ...+.|..++.+.
T Consensus 228 p~giavdp~---~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 228 CNGAETHPI---NGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp CCCEEECTT---TCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ceEEEEeCC---CCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 457889995 4777777777889999998765421111111 12356789999999955554 4577899988764
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.13 E-value=0.039 Score=44.05 Aligned_cols=164 Identities=9% Similarity=-0.045 Sum_probs=87.4
Q ss_pred CCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccc---
Q psy13856 34 IGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKY--- 106 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~--- 106 (271)
+|. +..++.++.|..+|. ...+...... +.++.+.+++...+. + +.+..+| . ++.......
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~----~~~~~~d~~g~l~v~-t--~~l~~~d-~---~g~~~~~~~~~~ 214 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAI----TSAASIGKDGTIYFG-S--DKVYAIN-P---DGTEKWNFYAGY 214 (330)
T ss_dssp TSC-EEEECTTSEEEEECTTSCEEEEEECSSCC----CSCCEECTTCCEEEE-S--SSEEEEC-T---TSCEEEEECCSS
T ss_pred CCE-EEEEcCCCEEEEECCCCCEeEEEecCCCc----eeeeEEcCCCEEEEE-e--CEEEEEC-C---CCcEEEEEccCC
Confidence 455 556677789999987 2233333334 667777777765444 3 6777777 2 222222111
Q ss_pred --eeeEEEeeccceee-----eEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCce
Q psy13856 107 --FKLTVYSTKLTRIL-----ILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT 179 (271)
Q Consensus 107 --~~~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 179 (271)
........++...+ +...+..++ .....+......+.++...+ ++ .|..++.+|.+..+|. +++.
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g--~~~~~~~~~~~~~~~~~~~~----~g-~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINPDG--TEKWRFKTGKRIESSPVIGN----TD-TIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECTTS--CEEEEEECSSCCCSCCEECT----TS-CEEEECTTCEEEEECT-TSCE
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECCCC--CEeEEeeCCCCccccceEcC----CC-eEEEecCCCCEEEECC-CCcE
Confidence 11112222233333 223333333 23333333333344455554 24 5666777888999996 4443
Q ss_pred eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 180 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 180 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
...+......+.++...++|. |..++.+|.+++.....
T Consensus 287 --~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 287 --KWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp --EEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred --EEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 223333344566777777776 55688899998887653
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.10 E-value=5.4e-05 Score=62.77 Aligned_cols=103 Identities=12% Similarity=-0.043 Sum_probs=52.5
Q ss_pred CCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCC
Q psy13856 75 KLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWG 154 (271)
Q Consensus 75 ~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 154 (271)
++..+++++.|+.++.||. .+++.+. .+.. +.+.+..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~---~tG~~~W--------------------------------~~~~--~~~~s~p~~~--- 47 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSK---RTGSIKW--------------------------------TLKE--DPVLQVPTHV--- 47 (369)
T ss_dssp CTTEEEEEETTSEEEEEET---TTCCEEE--------------------------------EEEC--CCSCCCC------
T ss_pred eCCEEEEEcCCCEEEEEEC---CCCCEEE--------------------------------EecC--CCceecceEc---
Confidence 5678999999999999998 5554433 1121 2233333334
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCC-CeE-EEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 155 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD-VVW-NVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 155 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~-~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
++..+++++.|+.++.||..+++. ......+.. .+. +..+. .+..+++++.|+.|+.||..++
T Consensus 48 -~g~~~v~~s~dg~l~a~d~~tG~~--~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 48 -EEPAFLPDPNDGSLYTLGSKNNEG--LTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp ---CCEEECTTTCCEEEC-----CC--SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--
T ss_pred -CCCEEEEeCCCCEEEEEECCCCce--eeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCC
Confidence 466788888999999999987764 222221110 010 00011 2345666777888888888766
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.10 E-value=0.024 Score=50.97 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=39.8
Q ss_pred CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 166 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
+|.|+.||+.+++. .-....+ .++..-.+...+.+++.++.|+.++.||.+++.
T Consensus 454 ~g~l~A~D~~tG~~--~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQA--AWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEE--EEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCe--EeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 47899999999874 3333322 333444566778899999999999999999883
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.00 E-value=0.083 Score=41.37 Aligned_cols=173 Identities=6% Similarity=-0.090 Sum_probs=100.9
Q ss_pred CCCCEEEEccC--CCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEE-eCCCcEEEEEeecCCCCceeec
Q psy13856 33 RIGHTLISCDT--QAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATS-SFHEAAKHLGTVQSSSPACLQP 104 (271)
Q Consensus 33 ~~g~~l~s~s~--d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~-s~d~~i~~~d~~~~~~~~~~~~ 104 (271)
+|+.++++.+. ++.|++.|. +..+.-.... ..-.+++. +..|..+ -.++.+.++|. .+.+.+..
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~---fgeGi~~~--g~~lyv~t~~~~~v~viD~---~t~~v~~~ 101 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY---FGEGLTLL--NEKLYQVVWLKNIGFIYDR---RTLSNIKN 101 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC---CEEEEEEE--TTEEEEEETTCSEEEEEET---TTTEEEEE
T ss_pred CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc---ceEEEEEe--CCEEEEEEecCCEEEEEEC---CCCcEEEE
Confidence 46776666553 689999998 2322211111 02244444 5555444 46788989998 67776665
Q ss_pred ccee---eEEEeeccceee-----eEEEEeeCCceEEeEEecC--CC---cceEEEEEccCCCCCCcEEEEEeCCCeEEE
Q psy13856 105 KYFK---LTVYSTKLTRIL-----ILVRICGGDKWIEETKLEN--HS---DWVRDVAWAPSWGLSKCMIASCSQDRKVII 171 (271)
Q Consensus 105 ~~~~---~~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~--h~---~~v~~v~~~p~~~~~~~~l~s~~~dg~i~i 171 (271)
+.++ ....+.+++.+. +.+.+.+....+....+.- +. ...+.+.|.. +..++....++.|.+
T Consensus 102 i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~d-----g~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 102 FTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYIN-----GEVWANIWQTDCIAR 176 (266)
T ss_dssp EECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET-----TEEEEEETTSSEEEE
T ss_pred EECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEEC-----CEEEEecCCCCeEEE
Confidence 5322 112333454444 5566522222234444331 11 1356777763 666677767899999
Q ss_pred EEcCCCceeeeeeec--cC-----------CCCeEEEEEecCCCEE-EEEECCCcEEEEEeCC
Q psy13856 172 WTSNDYVTWTPFIMN--TF-----------DDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENT 220 (271)
Q Consensus 172 wd~~~~~~~~~~~~~--~h-----------~~~v~~v~~~~~g~~l-~s~s~D~~v~iw~~~~ 220 (271)
-|..+++. ...+. +. ....+.++|+|++..+ +++...++|...++..
T Consensus 177 ID~~tg~V--~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 177 ISAKDGTL--LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EETTTCCE--EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EECCCCcE--EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999875 33332 11 1356899999997655 4555678888888764
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.98 E-value=0.016 Score=46.43 Aligned_cols=27 Identities=19% Similarity=0.035 Sum_probs=12.4
Q ss_pred CCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 190 DVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 190 ~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
..+.++...++|. |..++.++.|..++
T Consensus 215 ~~~~~~~~~~~g~-l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 215 WTVTRPAISEDGT-IYVTSLDGHLYAIN 241 (330)
T ss_dssp CCCSCCEECTTSC-EEEEETTTEEEEEC
T ss_pred cceeceEECCCCe-EEEEcCCCeEEEEC
Confidence 3344555555543 23334445555554
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.93 E-value=0.092 Score=40.76 Aligned_cols=143 Identities=8% Similarity=-0.086 Sum_probs=82.6
Q ss_pred CCCEEEEccCCCeEEeccc----eeee-ccccccccccceEEEEcCCCCeEE-EEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 34 IGHTLISCDTQAHIGIRST----ISLL-QGSVYLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----~~~~-~~h~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
++.++++-..++.|..++. ...+ ...... ..++++++++..|+ +-...+.|.+++.. . ...
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~----p~~ia~d~~~~~lyv~d~~~~~I~~~~~~---g-~~~----- 113 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS----PEGIALDHLGRTIFWTDSQLDRIEVAKMD---G-TQR----- 113 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC----EEEEEEETTTTEEEEEETTTTEEEEEETT---S-CSC-----
T ss_pred CCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC----ccEEEEEecCCeEEEEECCCCEEEEEEcC---C-CCE-----
Confidence 3456666667788988887 2222 111123 67899999765554 44456677777751 1 000
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeC--CCeEEEEEcCCCceeeeeee
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ--DRKVIIWTSNDYVTWTPFIM 185 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~ 185 (271)
..+ ..........++++|. ++.++++... .+.|..++...... ....
T Consensus 114 ------------------------~~~--~~~~~~~P~~i~vd~~---~g~lyv~~~~~~~~~I~~~~~dg~~~--~~~~ 162 (267)
T 1npe_A 114 ------------------------RVL--FDTGLVNPRGIVTDPV---RGNLYWTDWNRDNPKIETSHMDGTNR--RILA 162 (267)
T ss_dssp ------------------------EEE--ECSSCSSEEEEEEETT---TTEEEEEECCSSSCEEEEEETTSCCC--EEEE
T ss_pred ------------------------EEE--EECCCCCccEEEEeeC---CCEEEEEECCCCCcEEEEEecCCCCc--EEEE
Confidence 010 1111234578999994 3444444433 46888888764331 1122
Q ss_pred ccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCC
Q psy13856 186 NTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT 220 (271)
Q Consensus 186 ~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~ 220 (271)
.........+++++++..|..+. ..+.|..++++.
T Consensus 163 ~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 22234678899999876665554 467899999864
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.93 E-value=0.018 Score=51.57 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=46.2
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec-cCCCCeEEEEEecCCCE-EEEEEC----------
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDI-LTVSCG---------- 209 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~v~~~~~g~~-l~s~s~---------- 209 (271)
..+.+..+.+ ++.+++.++.||.+++||.++++. +..+. ++.....-+.|.++|+. ++..+.
T Consensus 477 ~~~~~g~~~~----~g~~v~~g~~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~ 550 (677)
T 1kb0_A 477 SPWNGGTLTT----AGNVVFQGTADGRLVAYHAATGEK--LWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAAR 550 (677)
T ss_dssp SSCCCCEEEE----TTTEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCC
T ss_pred CCCcCcceEe----CCCEEEEECCCCcEEEEECCCCce--eeeeeCCCCcccCCEEEEeCCEEEEEEeccCCcccccccc
Confidence 3344444555 467888889999999999999886 44443 22222234567788864 444333
Q ss_pred ------CCcEEEEEeC
Q psy13856 210 ------DNSVSLWKEN 219 (271)
Q Consensus 210 ------D~~v~iw~~~ 219 (271)
.+.+..|.+.
T Consensus 551 ~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 551 ATERQGPGTVYTFVVG 566 (677)
T ss_dssp SCSCCCCCEEEEEEET
T ss_pred ccccCCCCeEEEEecc
Confidence 3678888876
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.90 E-value=0.041 Score=44.18 Aligned_cols=148 Identities=6% Similarity=-0.054 Sum_probs=82.2
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeecccc---------c-------cccccceEEEEcC-CCCeEEEEeCCCcEEEE
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQGSV---------Y-------LRRESNKAGALSP-KLNRSATSSFHEAAKHL 91 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~~h~---------~-------~~~~~i~~~~~s~-~~~~l~s~s~d~~i~~~ 91 (271)
++|.++.++..++.|..|+. +..+.... + .....+.++++.+ +++ |+.+...+.+..+
T Consensus 28 ~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~i~~~ 106 (322)
T 2fp8_A 28 STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYHLSVV 106 (322)
T ss_dssp TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTEEEEE
T ss_pred CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCCEEEE
Confidence 47887778888899999987 22221100 0 0011267899997 554 4445444446666
Q ss_pred EeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC-CCcceEEEEEcc-CCCCCCcEEEEEeC----
Q psy13856 92 GTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN-HSDWVRDVAWAP-SWGLSKCMIASCSQ---- 165 (271)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~-h~~~v~~v~~~p-~~~~~~~~l~s~~~---- 165 (271)
+. ..+. +.. ......+ .......+++.| . +.+.++-..
T Consensus 107 d~---~~g~-~~~----------------------------~~~~~~~~~~~~p~~i~~d~~~----G~l~v~d~~~~~~ 150 (322)
T 2fp8_A 107 GS---EGGH-ATQ----------------------------LATSVDGVPFKWLYAVTVDQRT----GIVYFTDVSTLYD 150 (322)
T ss_dssp CT---TCEE-CEE----------------------------EESEETTEECSCEEEEEECTTT----CCEEEEESCSSCC
T ss_pred eC---CCCE-EEE----------------------------ecccCCCCcccccceEEEecCC----CEEEEECCccccc
Confidence 64 2111 110 0000011 112356788888 4 555555322
Q ss_pred -------------CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEE-ECCCcEEEEEeCC
Q psy13856 166 -------------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENT 220 (271)
Q Consensus 166 -------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~~~~ 220 (271)
++.|..+|..++.. ..+.......+.++|+|+|..|..+ +.++.|..|++..
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~---~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKET---TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEE---EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ccccceehcccCCCceEEEEeCCCCEE---EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 46788888766542 2221112345679999999866555 4568899999874
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.87 E-value=0.11 Score=40.41 Aligned_cols=147 Identities=7% Similarity=-0.054 Sum_probs=81.4
Q ss_pred CCEEEEccCCCeEEeccc----eeeecc-ccccccccceEEEEcCCCCeEEEEeC---CCcEEEEEeecCCCCceeeccc
Q psy13856 35 GHTLISCDTQAHIGIRST----ISLLQG-SVYLRRESNKAGALSPKLNRSATSSF---HEAAKHLGTVQSSSPACLQPKY 106 (271)
Q Consensus 35 g~~l~s~s~d~~i~lwd~----~~~~~~-h~~~~~~~i~~~~~s~~~~~l~s~s~---d~~i~~~d~~~~~~~~~~~~~~ 106 (271)
+.++++-...+.|.+++. ...+.. .... ...++++|++..|..+.. .+.|..++.. +...
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~----P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d----g~~~---- 158 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVN----PRGIVTDPVRGNLYWTDWNRDNPKIETSHMD----GTNR---- 158 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSS----EEEEEEETTTTEEEEEECCSSSCEEEEEETT----SCCC----
T ss_pred CeEEEEECCCCEEEEEEcCCCCEEEEEECCCCC----ccEEEEeeCCCEEEEEECCCCCcEEEEEecC----CCCc----
Confidence 445555556678887776 222211 1123 678999997665554443 3456555541 1000
Q ss_pred eeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec
Q psy13856 107 FKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN 186 (271)
Q Consensus 107 ~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 186 (271)
..+ ....-.....++++|. .+.++++-...+.|.++|...... .....
T Consensus 159 -------------------------~~~--~~~~~~~P~gia~d~~---~~~lyv~d~~~~~I~~~~~~g~~~--~~~~~ 206 (267)
T 1npe_A 159 -------------------------RIL--AQDNLGLPNGLTFDAF---SSQLCWVDAGTHRAECLNPAQPGR--RKVLE 206 (267)
T ss_dssp -------------------------EEE--ECTTCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTEEEE--EEEEE
T ss_pred -------------------------EEE--EECCCCCCcEEEEcCC---CCEEEEEECCCCEEEEEecCCCce--EEEec
Confidence 111 1112245678999994 345556666678999999875332 22222
Q ss_pred cCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeEEEEec
Q psy13856 187 TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 187 ~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
. ......++.. +..|..+. ..+.|..++..++ +.+.++.
T Consensus 207 ~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g---~~~~~i~ 246 (267)
T 1npe_A 207 G-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS---KEMDTFH 246 (267)
T ss_dssp C-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT---EEEEEEC
T ss_pred C-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC---CceEEEc
Confidence 2 2234566654 44555554 5689999998766 5555554
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.78 E-value=0.015 Score=52.89 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=69.7
Q ss_pred ceEEEEc-CCCCeEEEEe-CCC----cEEEEEeecCCCC-ceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC
Q psy13856 67 NKAGALS-PKLNRSATSS-FHE----AAKHLGTVQSSSP-ACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN 139 (271)
Q Consensus 67 i~~~~~s-~~~~~l~s~s-~d~----~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~ 139 (271)
+...+|| |||++|+-+. .+| .|+++|+ .++ +.+. . .. .
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl---~~g~~~l~-------------------------~--~~----~- 220 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRI---SDPSQTIA-------------------------D--KV----S- 220 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEET---TCTTCCCC-------------------------C--CE----E-
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEEC---CCCCEeCC-------------------------c--cc----c-
Confidence 6788999 9999877543 232 4888887 333 2111 0 00 0
Q ss_pred CCcceEEEEEccCCCCCCcEEEEEeCC-----CeEEEEEcCCCceeeeeeec-cCCCCeEEEEEecCCCEEEEEEC---C
Q psy13856 140 HSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSCG---D 210 (271)
Q Consensus 140 h~~~v~~v~~~p~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~---D 210 (271)
....++.|+| |++.|+-...| ..|..+++.++.......+. ........+.|+|||++|+..+. .
T Consensus 221 --~~~~~~~Wsp----Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 294 (751)
T 2xe4_A 221 --GTNGEIVWGP----DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPET 294 (751)
T ss_dssp --EECSCCEECS----STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSC
T ss_pred --CceeeEEEec----CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCC
Confidence 1134688999 67776666654 35788888765421122222 23345667899999998887663 3
Q ss_pred CcEEEEEeCCC
Q psy13856 211 NSVSLWKENTD 221 (271)
Q Consensus 211 ~~v~iw~~~~~ 221 (271)
..|+++|+.++
T Consensus 295 ~~l~~~d~~~~ 305 (751)
T 2xe4_A 295 AEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEESSSC
T ss_pred ceEEEEECCCC
Confidence 46888887654
No 245
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.78 E-value=0.096 Score=46.68 Aligned_cols=80 Identities=3% Similarity=-0.034 Sum_probs=49.0
Q ss_pred EEEEEccCCCCCCcEEEEEeCCC-----------eEEEEEcCCCceeeeeee--ccCCCC-eEEEEEecCCCEEEEEECC
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQDR-----------KVIIWTSNDYVTWTPFIM--NTFDDV-VWNVSWSLTGDILTVSCGD 210 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~--~~h~~~-v~~v~~~~~g~~l~s~s~D 210 (271)
.++.+... ++.+++.|+.++ .+.+||..+..- .... ...... -.+.+..|++++++.|+.+
T Consensus 402 ~av~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W--~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 402 NAVMYDAV---KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN--TVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp EEEEEETT---TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE--EEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred ceEeccCC---CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe--eEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 45555443 578888888543 677888776542 1111 111222 2344566899999999854
Q ss_pred -----------CcEEEEEeCCCCceeEEEEe
Q psy13856 211 -----------NSVSLWKENTDGAWQCITEM 230 (271)
Q Consensus 211 -----------~~v~iw~~~~~~~~~~~~~~ 230 (271)
..+.+||+.+ ..|..+..+
T Consensus 477 ~~~~~~~~~~~~~v~~ydp~t-~~W~~~~~~ 506 (656)
T 1k3i_A 477 RGIPFEDSTPVFTPEIYVPEQ-DTFYKQNPN 506 (656)
T ss_dssp BCCTTCCCSBCCCCEEEEGGG-TEEEECCCC
T ss_pred cCcCcCCCCcccceEEEcCCC-CceeecCCC
Confidence 5689999875 467665433
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.76 E-value=0.072 Score=43.61 Aligned_cols=148 Identities=9% Similarity=-0.045 Sum_probs=81.1
Q ss_pred cCCCCCCCEEEEccCCCeEEeccc-----eeeeccccccc-----cccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCC
Q psy13856 29 ESPLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLR-----RESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSS 98 (271)
Q Consensus 29 ~~~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~-----~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~ 98 (271)
..|.-++..+..++.++.|..+|. +.......... ...+. .....++..++.++.++.+..+|. .+
T Consensus 47 ~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~~~~g~l~a~d~---~t 122 (376)
T 3q7m_A 47 LHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLS-GGVTVSGGHVYIGSEKAQVYALNT---SD 122 (376)
T ss_dssp CCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEE-EEEEEETTEEEEEETTSEEEEEET---TT
T ss_pred eccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccc-cCceEeCCEEEEEcCCCEEEEEEC---CC
Confidence 356667778888888899999987 11111111000 00021 112224567788889999999997 54
Q ss_pred CceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc
Q psy13856 99 PACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV 178 (271)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 178 (271)
++.+.. .............. +..++.++.++.+..+|..+++
T Consensus 123 G~~~W~--------------------------------~~~~~~~~~~p~~~------~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 123 GTVAWQ--------------------------------TKVAGEALSRPVVS------DGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp CCEEEE--------------------------------EECSSCCCSCCEEE------TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEE--------------------------------EeCCCceEcCCEEE------CCEEEEEcCCCeEEEEECCCCc
Confidence 544321 11111111111121 3467777889999999998887
Q ss_pred eeeeeeeccCCCCe-----EEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 179 TWTPFIMNTFDDVV-----WNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 179 ~~~~~~~~~h~~~v-----~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
. ........... ...... +..++.++.++.|..+|..++.
T Consensus 165 ~--~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 165 V--KWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp E--EEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCC
T ss_pred E--EEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCc
Confidence 4 22222111100 111111 4567778889999999988763
No 247
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.70 E-value=0.17 Score=40.75 Aligned_cols=150 Identities=11% Similarity=0.162 Sum_probs=82.7
Q ss_pred CCCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 32 LRIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 32 ~~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
..++..++.+...+..+-.|- ......+... +..+++.+++.+++.+ .++.+..-+. ..
T Consensus 130 ~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~----~~~~~~~~~~~~~~~g-~~G~~~~S~d---~g--------- 192 (327)
T 2xbg_A 130 LGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGV----MRNLNRSPSGEYVAVS-SRGSFYSTWE---PG--------- 192 (327)
T ss_dssp EETTEEEEEETTCCEEEESSTTSSEEEEECSCCCC----EEEEEECTTSCEEEEE-TTSSEEEEEC---TT---------
T ss_pred ECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcc----eEEEEEcCCCcEEEEE-CCCcEEEEeC---CC---------
Confidence 345666665544233355564 2222333444 7889999988776555 4555532221 00
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec-
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN- 186 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 186 (271)
...|+.+. ......+..+.+.| ++.++ .++.+|.+++.+...+..|......
T Consensus 193 --------------------G~tW~~~~--~~~~~~~~~~~~~~----~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~ 245 (327)
T 2xbg_A 193 --------------------QTAWEPHN--RTTSRRLHNMGFTP----DGRLW-MIVNGGKIAFSDPDNSENWGELLSPL 245 (327)
T ss_dssp --------------------CSSCEEEE--CCSSSCEEEEEECT----TSCEE-EEETTTEEEEEETTEEEEECCCBCTT
T ss_pred --------------------CCceeECC--CCCCCccceeEECC----CCCEE-EEeCCceEEEecCCCCCeeEeccCCc
Confidence 12333332 23446778888888 46555 4456788777653334444222211
Q ss_pred -cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEE
Q psy13856 187 -TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI 227 (271)
Q Consensus 187 -~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~ 227 (271)
.....+.++.+.+++.+++++. ++.+ ++..+.+..|..+
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~ 285 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQD 285 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEEC
T ss_pred ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEc
Confidence 1224588999998888776654 6766 3444555668654
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.57 E-value=0.11 Score=42.39 Aligned_cols=136 Identities=7% Similarity=-0.082 Sum_probs=75.4
Q ss_pred CCCCCCEEEEccCCCeEEeccc---eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccce
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST---ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF 107 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~---~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~ 107 (271)
|...+..+..++.++.+..+|. ...+...... ...+.. ++..++.++.++.+..+|. .+++.+.
T Consensus 235 p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~----~~~~~~--~~~~l~~~~~~g~l~~~d~---~tG~~~w---- 301 (376)
T 3q7m_A 235 PVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS----VNDFIV--DGNRIYLVDQNDRVMALTI---DGGVTLW---- 301 (376)
T ss_dssp CEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC----EEEEEE--ETTEEEEEETTCCEEEEET---TTCCEEE----
T ss_pred cEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC----CCCceE--ECCEEEEEcCCCeEEEEEC---CCCcEEE----
Confidence 3334556666777788888886 1111111112 223333 3556777778888888886 4443222
Q ss_pred eeEEEeeccceeeeEEEEeeCCceEEeEEec-CCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec
Q psy13856 108 KLTVYSTKLTRILILVRICGGDKWIEETKLE-NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN 186 (271)
Q Consensus 108 ~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 186 (271)
... .....+...... +..+..++.+|.+.++|..+++. .....
T Consensus 302 ----------------------------~~~~~~~~~~~~~~~~------~~~l~v~~~~g~l~~~d~~tG~~--~~~~~ 345 (376)
T 3q7m_A 302 ----------------------------TQSDLLHRLLTSPVLY------NGNLVVGDSEGYLHWINVEDGRF--VAQQK 345 (376)
T ss_dssp ----------------------------EECTTTTSCCCCCEEE------TTEEEEECTTSEEEEEETTTCCE--EEEEE
T ss_pred ----------------------------eecccCCCcccCCEEE------CCEEEEEeCCCeEEEEECCCCcE--EEEEe
Confidence 111 111112222222 35777888899999999998875 33333
Q ss_pred cCCCCeEE-EEEecCCCEEEEEECCCcEEEEE
Q psy13856 187 TFDDVVWN-VSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 187 ~h~~~v~~-v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
.....+.. ... .+..|+.++.||.|+.|+
T Consensus 346 ~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 346 VDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred cCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 22222221 111 245778888999999887
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.48 E-value=0.2 Score=38.58 Aligned_cols=150 Identities=5% Similarity=-0.010 Sum_probs=88.0
Q ss_pred ceEEEEcCCCCeEEEEeCC--CcEEEEEeecCCCCceeeccce-----eeEEEeeccceee------eEEEEeeCCceEE
Q psy13856 67 NKAGALSPKLNRSATSSFH--EAAKHLGTVQSSSPACLQPKYF-----KLTVYSTKLTRIL------ILVRICGGDKWIE 133 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d--~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~------~~v~i~~~~~~~~ 133 (271)
...+.|+. +.+..+.+.+ .+|+.+|. .+++.++.... ...+.. .++.+. +.+.+.+...++.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~---~tgkv~~~~~l~~~~fgeGi~~-~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDL---ETGRILQRAEVPPPYFGAGIVA-WRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEET---TTCCEEEEEECCTTCCEEEEEE-ETTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEEC---CCCCEEEEEeCCCCcceeEEEE-eCCEEEEEEeeCCEEEEEECCcCcE
Confidence 45899986 5566666665 48999999 77777765422 222222 233332 5555533333366
Q ss_pred eEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCC---CCeEEEEEecCCCEEEEEECC
Q psy13856 134 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD---DVVWNVSWSLTGDILTVSCGD 210 (271)
Q Consensus 134 ~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~---~~v~~v~~~~~g~~l~s~s~D 210 (271)
+.++... ..-+.+++. .+.+++| ..++.|.++|..+.+.........+. ..++.+.|. +|...+..-.+
T Consensus 98 ~~ti~~~-~~Gwglt~d-----g~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 98 RARFRYP-GEGWALTSD-----DSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp EEEEECS-SCCCEEEEC-----SSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred EEEEeCC-CCceEEeeC-----CCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 6666532 223455543 2345555 45889999999887652111222222 245667765 66666555567
Q ss_pred CcEEEEEeCCCCceeEEEEecc
Q psy13856 211 NSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 211 ~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
..|.+.|+.++ +.+..+.-
T Consensus 170 ~~I~vIDp~tG---~V~~~idl 188 (243)
T 3mbr_X 170 SRIARIDPASG---KVVAWIDL 188 (243)
T ss_dssp TEEEEECTTTC---BEEEEEEC
T ss_pred CeEEEEECCCC---CEEEEEEC
Confidence 89999999988 66666554
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.43 E-value=0.13 Score=46.09 Aligned_cols=73 Identities=8% Similarity=0.056 Sum_probs=48.2
Q ss_pred EEEEccCCCCCCcEEEEEeCCCe-------------------EEEEEcCCCceeeeeeeccCC-------CCeEEEEEec
Q psy13856 146 DVAWAPSWGLSKCMIASCSQDRK-------------------VIIWTSNDYVTWTPFIMNTFD-------DVVWNVSWSL 199 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~dg~-------------------i~iwd~~~~~~~~~~~~~~h~-------~~v~~v~~~~ 199 (271)
.++++| +..+++.+..++. |..+|.++++..=......|. .+..-.....
T Consensus 239 ~~~~d~----~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~ 314 (689)
T 1yiq_A 239 SFAYDP----ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI 314 (689)
T ss_dssp CEEEET----TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceeEcC----CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc
Confidence 577888 4677888877764 999999998751111222232 1222223334
Q ss_pred CCC---EEEEEECCCcEEEEEeCCCC
Q psy13856 200 TGD---ILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 200 ~g~---~l~s~s~D~~v~iw~~~~~~ 222 (271)
+|. .++.++.+|.++++|..++.
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCC
Confidence 565 78899999999999998873
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.42 E-value=0.058 Score=42.08 Aligned_cols=109 Identities=8% Similarity=0.039 Sum_probs=70.1
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEE
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRD 146 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~ 146 (271)
...+.|+ ++.+..+.+.++.|+.+|. .+++.++. + +.. .-.-..
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~---~Tgkv~~~-----------------------------~--l~~-~~FgeG 100 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSL---ESAQPVWM-----------------------------E--RLG-NIFAEG 100 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCS---SCSSCSEE-----------------------------E--ECT-TCCEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEEC---CCCcEEeE-----------------------------E--CCC-CcceeE
Confidence 3588887 3567777888889999998 55554331 1 221 111123
Q ss_pred EEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 147 VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+.... ..+.+..-.++.+.+||..+.+. ...+.. ...-+.++ +++..|+.+..+++|.++|..+.
T Consensus 101 it~~g-----~~Ly~ltw~~~~v~V~D~~Tl~~--~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~ 165 (268)
T 3nok_A 101 LASDG-----ERLYQLTWTEGLLFTWSGMPPQR--ERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGF 165 (268)
T ss_dssp EEECS-----SCEEEEESSSCEEEEEETTTTEE--EEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTC
T ss_pred EEEeC-----CEEEEEEccCCEEEEEECCcCcE--EEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCC
Confidence 55543 45566666789999999998775 333332 22224444 56778877777889999998876
No 252
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.39 E-value=0.17 Score=42.73 Aligned_cols=75 Identities=12% Similarity=0.111 Sum_probs=48.2
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeCC
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT 220 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~~ 220 (271)
....++++|. ++.++++-..++.|+.+|..++.........+....-..++|+|+|..|..+. ..+.|+.++++.
T Consensus 229 ~P~giavd~~---~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 229 GAKTCAVHPQ---NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp SBCCCEECTT---TCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCEEEEeCC---CCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 3456888884 47777777678899999987655310111111122335699999998555554 567898888763
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.36 E-value=0.28 Score=38.95 Aligned_cols=173 Identities=9% Similarity=-0.066 Sum_probs=90.6
Q ss_pred CCCCEEEEccCCCeEEeccc---eeeeccccccccccceEEEEcCCCCeEEEEeCCC--cEEEEEeecCCCCceeecc--
Q psy13856 33 RIGHTLISCDTQAHIGIRST---ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHE--AAKHLGTVQSSSPACLQPK-- 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~---~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~--~i~~~d~~~~~~~~~~~~~-- 105 (271)
++|+++++-..++.|..||. .......... +.++++.++++++++..... .+..++. .+++.....
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~----p~gia~~~dG~l~vad~~~~~~~v~~~d~---~~g~~~~~~~~ 113 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEGK----VSGLAFTSNGDLVATGWNADSIPVVSLVK---SDGTVETLLTL 113 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSSE----EEEEEECTTSCEEEEEECTTSCEEEEEEC---TTSCEEEEEEC
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCCC----ceeEEEcCCCcEEEEeccCCcceEEEEcC---CCCeEEEEEeC
Confidence 47888888777899999987 2111122234 78999999998666554332 3545554 344332211
Q ss_pred ---ceeeEEE-eeccceee-----eEEEE-eeC-CceEEeEE--------ecCCCcceEEEEEccCCCCCCc-EEEEEeC
Q psy13856 106 ---YFKLTVY-STKLTRIL-----ILVRI-CGG-DKWIEETK--------LENHSDWVRDVAWAPSWGLSKC-MIASCSQ 165 (271)
Q Consensus 106 ---~~~~~~~-~~~~~~l~-----~~v~i-~~~-~~~~~~~~--------~~~h~~~v~~v~~~p~~~~~~~-~l~s~~~ 165 (271)
.++.... ...+..++ +.+.. ... +....... ..+.-.....+ +| ++. ++++-..
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~----dg~~lyv~d~~ 187 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR----FGNFLYVSNTE 187 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE----ETTEEEEEETT
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc----CCCEEEEEeCC
Confidence 1111111 11112122 33333 211 11011000 00111233455 66 454 5566666
Q ss_pred CCeEEEEEcCC-CceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 166 DRKVIIWTSND-YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 166 dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.+.|..++... +.......+.. ......++++++|+++++....+.|.+++..
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 78999999875 22100111111 1345668899999887777778889999864
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.28 E-value=0.15 Score=40.87 Aligned_cols=112 Identities=10% Similarity=-0.041 Sum_probs=64.9
Q ss_pred ceEEEEcCCCCeEEEE-eCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceE
Q psy13856 67 NKAGALSPKLNRSATS-SFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVR 145 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~-s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~ 145 (271)
...++|+|+++.|..+ ..++.|..++.. .... +..+....+. + ..
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~---~~~~---------------------------~~~~~~~~~~---g-P~ 232 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLE---GPKK---------------------------GTAEVLVKIP---N-PG 232 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESS---STTT---------------------------TCEEEEEECS---S-EE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECC---CCcC---------------------------CccceEEeCC---C-CC
Confidence 5689999999865554 566788888862 1110 0101111222 2 56
Q ss_pred EEEEccCCCCCCcEEEEEeC----------CCeEEEEEcCCCceeeeeeeccC----CCCeEEEEEecCCCEEEEEECCC
Q psy13856 146 DVAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTF----DDVVWNVSWSLTGDILTVSCGDN 211 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~h----~~~v~~v~~~~~g~~l~s~s~D~ 211 (271)
.+++++ +|.++++... .+.|..+|.. ++. ...+... -..+..+++ .++.++++....+
T Consensus 233 gi~~d~----~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~--~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 233 NIKRNA----DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI--LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHG 304 (322)
T ss_dssp EEEECT----TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE--EEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCS
T ss_pred CeEECC----CCCEEEEecCcccccccCCCccEEEEECCC-CCE--EEEEECCCCCccccceEEEE-eCCEEEEeecCCC
Confidence 788888 5777766654 4667888764 443 2333222 234566666 4566665555677
Q ss_pred cEEEEEeCC
Q psy13856 212 SVSLWKENT 220 (271)
Q Consensus 212 ~v~iw~~~~ 220 (271)
.|..+++..
T Consensus 305 ~i~~~~~~~ 313 (322)
T 2fp8_A 305 SVGILVYDK 313 (322)
T ss_dssp EEEEEEC--
T ss_pred ceEEEeccc
Confidence 888888753
No 255
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.17 E-value=0.019 Score=47.41 Aligned_cols=81 Identities=9% Similarity=-0.120 Sum_probs=56.1
Q ss_pred EEeEEecCCCcceEEEEEccCCCCCCcEEEEEe----------CCCeEEEEEcCCCceeeeeeeccC-------CCCeEE
Q psy13856 132 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCS----------QDRKVIIWTSNDYVTWTPFIMNTF-------DDVVWN 194 (271)
Q Consensus 132 ~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~h-------~~~v~~ 194 (271)
+.+..+.....+ .+.++| |+.++..+. .++.|.+||..+.+. ...+... ......
T Consensus 57 ~v~~~i~vG~~P--~i~~sp----Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~~~g~~P~~ 128 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGH----SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFSVGPRVHI 128 (368)
T ss_dssp EEEEEEEECTTC--EEEECT----TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSCCBSCCTTS
T ss_pred eEEEEEeCCCCC--ceEECC----CCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCccccccCCCcce
Confidence 444444333344 799999 677777765 378999999999876 4444322 123567
Q ss_pred EEEecCCCEEEEEEC--CCcEEE--EEeCC
Q psy13856 195 VSWSLTGDILTVSCG--DNSVSL--WKENT 220 (271)
Q Consensus 195 v~~~~~g~~l~s~s~--D~~v~i--w~~~~ 220 (271)
++++|||++++.+.. +..|.+ +|..+
T Consensus 129 ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 129 IGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 899999999998875 457888 88754
No 256
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.14 E-value=0.3 Score=39.37 Aligned_cols=73 Identities=7% Similarity=0.019 Sum_probs=50.1
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeec----cCCCCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~----~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
....++..+ +|+..++++.- +.|...+...... ....+. ...-..+.++++|+|..|++...++.+.-+|
T Consensus 138 ~~nDvavD~----~GnaYVt~s~~~~~I~rV~pdG~~~-~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 138 GVVQSAQDR----DGNSYVAFALGMPAIARVSADGKTV-STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EEEEEEECT----TSCEEEEEEESSCEEEEECTTSCCE-EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred CCceeEECC----CCCEEEeCCCCCCeEEEEeCCCCEE-eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 467888988 58888888877 7777666554321 011111 1112367899999999888887799999999
Q ss_pred eCC
Q psy13856 218 ENT 220 (271)
Q Consensus 218 ~~~ 220 (271)
++.
T Consensus 213 ~~~ 215 (334)
T 2p9w_A 213 VSK 215 (334)
T ss_dssp CSS
T ss_pred CCC
Confidence 874
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.99 E-value=0.17 Score=45.31 Aligned_cols=55 Identities=5% Similarity=0.160 Sum_probs=38.8
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
.+|.|..||..+++. .-... +........+...+.+++.++.|+.|+.||.+++.
T Consensus 436 ~~g~l~A~D~~tG~~--~W~~~-~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 436 VSGALLAWDPVKQKA--AWKVP-YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CEEEEEEEETTTTEE--EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccceEEEEeCCCCcE--EEEcc-CCCCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 458899999999874 22222 22233334455678889999999999999998873
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.87 E-value=0.14 Score=45.69 Aligned_cols=79 Identities=8% Similarity=0.130 Sum_probs=51.1
Q ss_pred ceEEEEEccCCCCCCcEEEEEeC-CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CC-----CcEEE
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GD-----NSVSL 215 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D-----~~v~i 215 (271)
...++++.+ ++.+++.|+. +..+.+||..+..-.....+.. ...-.+++..++|++++.|+ .+ ..+.+
T Consensus 244 ~~~~~~~~~----~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 244 FCPGISMDG----NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp SSCEEEECT----TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred ccccccCCC----CCCEEEeCCCCCCceEEecCcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 334567777 5888888884 5689999998754211111211 11223455667899999988 44 56999
Q ss_pred EEeCCCCceeEE
Q psy13856 216 WKENTDGAWQCI 227 (271)
Q Consensus 216 w~~~~~~~~~~~ 227 (271)
||+.+ ..|..+
T Consensus 319 yd~~t-~~W~~~ 329 (656)
T 1k3i_A 319 YSPSS-KTWTSL 329 (656)
T ss_dssp EETTT-TEEEEE
T ss_pred eCCCC-CcceeC
Confidence 99875 467765
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.81 E-value=0.46 Score=36.56 Aligned_cols=162 Identities=9% Similarity=0.030 Sum_probs=90.7
Q ss_pred CCCEEEEccCCC--eEEeccc-----eeeeccccccccccceEEEEcCCCCeEEE-EeCCCcEEEEEeecCCCCceeecc
Q psy13856 34 IGHTLISCDTQA--HIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSAT-SSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 34 ~g~~l~s~s~d~--~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s-~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
++.++.+.+.+| .|+.+|+ +..+.-.. . .......+++..|.. ...++.+.++|. .+.+.+..+
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~----~fgeGi~~~~~~ly~ltw~~~~v~v~D~---~tl~~~~ti 101 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-P----YFGAGIVAWRDRLIQLTWRNHEGFVYDL---ATLTPRARF 101 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-T----CCEEEEEEETTEEEEEESSSSEEEEEET---TTTEEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-C----cceeEEEEeCCEEEEEEeeCCEEEEEEC---CcCcEEEEE
Confidence 466777777754 8999998 22222111 1 333333333454444 447888999998 777777766
Q ss_pred ceee--EEEeeccceee-----eEEEEeeCCceEEeEEecC--CC---cceEEEEEccCCCCCCcEEEEEeCCCeEEEEE
Q psy13856 106 YFKL--TVYSTKLTRIL-----ILVRICGGDKWIEETKLEN--HS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT 173 (271)
Q Consensus 106 ~~~~--~~~~~~~~~l~-----~~v~i~~~~~~~~~~~~~~--h~---~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd 173 (271)
.++. .-.+.+++.+. +.+.+.+...++....+.- +. ..++.+.|.. +..++..-.+..|.+.|
T Consensus 102 ~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~-----G~lyanvw~s~~I~vID 176 (243)
T 3mbr_X 102 RYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN-----GELLANVWLTSRIARID 176 (243)
T ss_dssp ECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET-----TEEEEEETTTTEEEEEC
T ss_pred eCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC-----CEEEEEECCCCeEEEEE
Confidence 3321 11223344333 5555533332244444322 22 2345566653 67777776788999999
Q ss_pred cCCCceeeeeeecc-----------CCCCeEEEEEecCCCEEEEEE
Q psy13856 174 SNDYVTWTPFIMNT-----------FDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 174 ~~~~~~~~~~~~~~-----------h~~~v~~v~~~~~g~~l~s~s 208 (271)
.++++....-.+.+ -.+..+.++++|++..|+..+
T Consensus 177 p~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 177 PASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99987521112111 123568999999876665554
No 260
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.80 E-value=0.19 Score=43.87 Aligned_cols=52 Identities=8% Similarity=0.002 Sum_probs=34.4
Q ss_pred eEEEEEcCC--CceeeeeeeccCCCCeEEEEEecCCCEEEEEEC-CCcEEEEEeCCC
Q psy13856 168 KVIIWTSND--YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTD 221 (271)
Q Consensus 168 ~i~iwd~~~--~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-D~~v~iw~~~~~ 221 (271)
.|.+.|.++ +..+ ...+. -.....++.++|||+++++++. +.+|.++|+.+.
T Consensus 255 ~V~VID~~~~~~~~~-~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 255 GVKVVDGRKEASSLF-TRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp TEEEEECSGGGCCSS-EEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cEEEEeCcccCCcee-EEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 477888776 3220 11111 1224567899999998877764 789999999843
No 261
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.73 E-value=0.76 Score=38.48 Aligned_cols=136 Identities=8% Similarity=-0.057 Sum_probs=80.1
Q ss_pred cceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceE
Q psy13856 66 SNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVR 145 (271)
Q Consensus 66 ~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~ 145 (271)
+|..+..+|+|++||..+. ..|.+..+..+.....-........+ ....+ +..+ .....+|.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~---------~ty~l---~~~~-----~~~~s~I~ 128 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQI---------FHYSI---DEEE-----VGPKSSIK 128 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEE---------EEEEG---GGCC-------CCCCEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccce---------eEEEc---CCcc-----cCCCCcee
Confidence 4788999999999988854 57778887422111110000000000 00000 0000 11367899
Q ss_pred EEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee---------ccCCCCeEEEEEecCCCEEEEEE--CCCcEE
Q psy13856 146 DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---------NTFDDVVWNVSWSLTGDILTVSC--GDNSVS 214 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~h~~~v~~v~~~~~g~~l~s~s--~D~~v~ 214 (271)
.+.|+|... .+..|++-..|+.|++||+......+. .+ ......|.+++|..++-.|...+ ..|.|+
T Consensus 129 qVlWHPl~~-~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 129 KVLFHPKSY-RDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EEEECTTBG-GGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred EEEeccccC-CCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 999999521 245788888999999999986322111 22 12235788999999887777755 778887
Q ss_pred EEEeCCC
Q psy13856 215 LWKENTD 221 (271)
Q Consensus 215 iw~~~~~ 221 (271)
-..+--.
T Consensus 207 AlcP~LP 213 (452)
T 3pbp_A 207 AFYPFLP 213 (452)
T ss_dssp EESSCCC
T ss_pred EECCCCc
Confidence 6655433
No 262
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.63 E-value=0.81 Score=39.19 Aligned_cols=73 Identities=7% Similarity=0.010 Sum_probs=48.6
Q ss_pred EEEEEccCCCCCCcEEEEEeCCCeEEEEEcC-------CCceee----------eeee-ccCCCCeEEEEEecCCCEEEE
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSN-------DYVTWT----------PFIM-NTFDDVVWNVSWSLTGDILTV 206 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~-------~~~~~~----------~~~~-~~h~~~v~~v~~~~~g~~l~s 206 (271)
..++.+|. ++.++++-..++.|..+|+. ++..|. ...+ .+.....+.++|+|+|.+|..
T Consensus 250 ~giavdp~---~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYv 326 (496)
T 3kya_A 250 NGATIHPI---NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYF 326 (496)
T ss_dssp CCEEECTT---TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred eEEEEcCC---CCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEE
Confidence 46788995 57777788888999999987 443210 0111 122345678999999996555
Q ss_pred EE-CCCcEEEEEeCC
Q psy13856 207 SC-GDNSVSLWKENT 220 (271)
Q Consensus 207 ~s-~D~~v~iw~~~~ 220 (271)
+. ..+.|+.++++.
T Consensus 327 aD~~~h~I~kid~dg 341 (496)
T 3kya_A 327 GVINNHYFMRSDYDE 341 (496)
T ss_dssp EETTTTEEEEEEEET
T ss_pred EeCCCCEEEEEecCC
Confidence 54 567888877653
No 263
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.62 E-value=0.74 Score=37.61 Aligned_cols=86 Identities=8% Similarity=0.042 Sum_probs=53.0
Q ss_pred EEeEEecCC-CcceEEEEEccCCCCCCcEEEEEe-----------------CCCeEEEEEcCCCceeeeeeeccCCCCeE
Q psy13856 132 IEETKLENH-SDWVRDVAWAPSWGLSKCMIASCS-----------------QDRKVIIWTSNDYVTWTPFIMNTFDDVVW 193 (271)
Q Consensus 132 ~~~~~~~~h-~~~v~~v~~~p~~~~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 193 (271)
..+..+.+. -...+.+.+.+ +|.+.++.. ..|.+..+|. ++ ...+...-...+
T Consensus 154 ~~~~~~~g~~~~~pND~~v~~----~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~---~~~~~~~l~~pN 224 (355)
T 3sre_A 154 LHLKTIRHKLLPSVNDIVAVG----PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND---VRVVAEGFDFAN 224 (355)
T ss_dssp EEEEEECCTTCSSEEEEEEEE----TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC---CEEEEEEESSEE
T ss_pred EEEeccccCCCCCCceEEEeC----CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce---EEEeecCCcccC
Confidence 344444433 23567888888 577776654 1244555544 33 233322234578
Q ss_pred EEEEecCCCEEEEEE-CCCcEEEEEeCCCCceeE
Q psy13856 194 NVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQC 226 (271)
Q Consensus 194 ~v~~~~~g~~l~s~s-~D~~v~iw~~~~~~~~~~ 226 (271)
.++|+||++.|..+. ..+.|..|+++.++....
T Consensus 225 Gia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 225 GINISPDGKYVYIAELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred cceECCCCCEEEEEeCCCCeEEEEEECCCCcEec
Confidence 999999998777665 478899999976554443
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.59 E-value=0.8 Score=37.79 Aligned_cols=74 Identities=8% Similarity=-0.048 Sum_probs=47.2
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....++++|. ++.++.+-... +.|...++..... .......-...+.++|+|++..|..+. ..+.|..++++
T Consensus 202 ~~P~giavdp~---~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 202 EKPRAIALHPM---EGTIYWTDWGNTPRIEASSMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SCEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCcEEEEEcC---CCeEEEeccCCCCEEEEEeCCCCCc--EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 45678999985 45555555555 7888888765432 222223334578899998766555554 46678888875
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 277 G 277 (386)
T 3v65_B 277 G 277 (386)
T ss_dssp S
T ss_pred C
Confidence 3
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.58 E-value=0.75 Score=37.38 Aligned_cols=74 Identities=8% Similarity=-0.048 Sum_probs=47.7
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....++++|. ++.++.+-... +.|...++..... .......-...+.++++|++..|..+. ..+.|..++++
T Consensus 159 ~~P~~iavdp~---~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 159 EKPRAIALHPM---EGTIYWTDWGNTPRIEASSMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SCEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCSC--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEecC---cCeEEEeccCCCCEEEEEeCCCCCc--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 45678999985 45666665555 7888888765432 122222234578899998766655554 45678888876
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 234 G 234 (349)
T 3v64_C 234 G 234 (349)
T ss_dssp S
T ss_pred C
Confidence 4
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.28 E-value=1.4 Score=39.41 Aligned_cols=74 Identities=7% Similarity=0.076 Sum_probs=48.1
Q ss_pred EEEEEccCCCCCCcEEEEEeCCC-------------------eEEEEEcCCCceeeeeeeccCC-------CCeEEEEEe
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQDR-------------------KVIIWTSNDYVTWTPFIMNTFD-------DVVWNVSWS 198 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~h~-------~~v~~v~~~ 198 (271)
..++++| +..++..+..++ .|..+|.++++..=......|. .+.....+.
T Consensus 233 ~~~a~d~----~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~ 308 (668)
T 1kv9_A 233 DSMAYDP----ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELN 308 (668)
T ss_dssp SCEEEET----TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred cceEEcC----CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEec
Confidence 3577888 466777776665 4999999988741112222232 233333344
Q ss_pred cCCC---EEEEEECCCcEEEEEeCCCC
Q psy13856 199 LTGD---ILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 199 ~~g~---~l~s~s~D~~v~iw~~~~~~ 222 (271)
.+|+ .++.++.+|.++++|..++.
T Consensus 309 ~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 309 IDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 4665 68889999999999998873
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.26 E-value=0.85 Score=36.62 Aligned_cols=143 Identities=6% Similarity=-0.010 Sum_probs=77.1
Q ss_pred CCCCCCEEEEccCCCeEEeccc-----eeeeccccccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 31 PLRIGHTLISCDTQAHIGIRST-----ISLLQGSVYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 31 ~~~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
..+++.+++.+...+..+-+|- ...-...... +..+++.++++.+ .++.++.++.... ..+
T Consensus 170 ~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~----~~~~~~~~~g~~~-~~~~~G~~~~s~~---D~G------ 235 (327)
T 2xbg_A 170 RSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRR----LHNMGFTPDGRLW-MIVNGGKIAFSDP---DNS------ 235 (327)
T ss_dssp ECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSC----EEEEEECTTSCEE-EEETTTEEEEEET---TEE------
T ss_pred EcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCc----cceeEECCCCCEE-EEeCCceEEEecC---CCC------
Confidence 3456777776655444444442 1111122333 6788888887655 4556777655421 001
Q ss_pred ceeeEEEeeccceeeeEEEEeeCCceEEeEEe-cCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeee
Q psy13856 106 YFKLTVYSTKLTRILILVRICGGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI 184 (271)
Q Consensus 106 ~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 184 (271)
..|..+..- ..+...+.++.+.| ++.+++.+. ++.+ .+....+..|....
T Consensus 236 -----------------------~tW~~~~~~~~~~~~~~~~v~~~~----~~~~~~~g~-~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 236 -----------------------ENWGELLSPLRRNSVGFLDLAYRT----PNEVWLAGG-AGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp -----------------------EEECCCBCTTSSCCSCEEEEEESS----SSCEEEEES-TTCE-EEESSTTSSCEECG
T ss_pred -----------------------CeeEeccCCcccCCcceEEEEecC----CCEEEEEeC-CCeE-EEeCCCCcccEEcC
Confidence 111211110 01224578899987 466666654 6766 45556666653222
Q ss_pred e-ccCCCCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 185 M-NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 185 ~-~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
. ..+...++++.|.+++. ++.++.+|.|.-++
T Consensus 287 ~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 287 DVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp GGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 1 12345788899976555 55666788776554
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.17 E-value=1 Score=36.53 Aligned_cols=79 Identities=5% Similarity=-0.037 Sum_probs=48.5
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.....++++|. ++.+..+-...+.|..+|+..... ...+.........+++ ..+.++.+-...+.|..++..++
T Consensus 203 ~~PnGla~d~~---~~~lY~aD~~~~~I~~~~~dG~~~--~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 203 FWPNGLTIDYA---GRRMYWVDAKHHVIERANLDGSHR--KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC--EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCcceEEEeCC---CCEEEEEECCCCEEEEEeCCCCce--EEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 45678999985 455666666678899999875432 2223333345667777 34555555556778888875455
Q ss_pred CceeE
Q psy13856 222 GAWQC 226 (271)
Q Consensus 222 ~~~~~ 226 (271)
.....
T Consensus 277 ~~~~~ 281 (349)
T 3v64_C 277 KNQEI 281 (349)
T ss_dssp CSCEE
T ss_pred CccEE
Confidence 33333
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.11 E-value=1.2 Score=36.81 Aligned_cols=79 Identities=5% Similarity=-0.037 Sum_probs=48.9
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
.....|+++|. ++.+..+-+..+.|..+|+..... ...+.........+++ ..+.++.+....+.|..++..++
T Consensus 246 ~~PnGlavd~~---~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 246 FWPNGLTIDYA---GRRMYWVDAKHHVIERANLDGSHR--KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SCEEEEEEEGG---GTEEEEEETTTTEEEEECTTSCSC--EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCeeeEEEeCC---CCEEEEEECCCCEEEEEeCCCCee--EEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 45678999984 455556666678899999865432 2223333345677777 44555556556778888885555
Q ss_pred CceeE
Q psy13856 222 GAWQC 226 (271)
Q Consensus 222 ~~~~~ 226 (271)
.....
T Consensus 320 ~~~~~ 324 (386)
T 3v65_B 320 KNQEI 324 (386)
T ss_dssp CSCEE
T ss_pred cceEE
Confidence 43333
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.97 E-value=0.95 Score=35.08 Aligned_cols=155 Identities=12% Similarity=-0.026 Sum_probs=86.9
Q ss_pred CCCCEEEEccCCCeEEeccc-----eeeecccc-----ccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCcee
Q psy13856 33 RIGHTLISCDTQAHIGIRST-----ISLLQGSV-----YLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACL 102 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~-----~~~~~~h~-----~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~ 102 (271)
+++.++++.-.++.+.++++ +....... ...-...-+++|+|.++.|.++.......+|..........+
T Consensus 79 ~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l 158 (255)
T 3qqz_A 79 GDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL 158 (255)
T ss_dssp STTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce
Confidence 57777666656677777765 11111110 000111468999999888877776666667766200000000
Q ss_pred eccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeee
Q psy13856 103 QPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP 182 (271)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 182 (271)
. +..... .. -..+-....+++++|. .+.+++.....+.+..+|.... ....
T Consensus 159 ~---------------------i~~~~~--~~--~~~~~~d~S~l~~dp~---tg~lliLS~~s~~L~~~d~~g~-~~~~ 209 (255)
T 3qqz_A 159 H---------------------ISKDKA--LQ--RQFTLDDVSGAEFNQQ---KNTLLVLSHESRALQEVTLVGE-VIGE 209 (255)
T ss_dssp E---------------------EEECHH--HH--HTCCSSCCCEEEEETT---TTEEEEEETTTTEEEEECTTCC-EEEE
T ss_pred e---------------------eecchh--hc--cccccCCceeEEEcCC---CCeEEEEECCCCeEEEEcCCCC-EEEE
Confidence 0 000000 00 0012234689999997 7888888888999999997643 3222
Q ss_pred eeec-cC------CCCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 183 FIMN-TF------DDVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 183 ~~~~-~h------~~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
..+. +. -...-.|+|.++|++.+ .++-+.++.+.
T Consensus 210 ~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 210 MSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFT 250 (255)
T ss_dssp EECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEE
T ss_pred EEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEE
Confidence 2333 21 12557899999998544 46666555554
No 271
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.74 E-value=1.2 Score=35.00 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=41.8
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+. .++.+++.|+.+ ..+.+||+.+ ..|..
T Consensus 207 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~ 283 (301)
T 2vpj_A 207 DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII-DSWEV 283 (301)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT-TEEEE
T ss_pred CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC-CeEEE
Confidence 5677777764 468899988754211111111111112222 366777777765 3578888875 47888
Q ss_pred EEEecc
Q psy13856 227 ITEMGK 232 (271)
Q Consensus 227 ~~~~~~ 232 (271)
+..+..
T Consensus 284 ~~~~~~ 289 (301)
T 2vpj_A 284 VTSMGT 289 (301)
T ss_dssp EEEEEE
T ss_pred cCCCCc
Confidence 766543
No 272
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.55 E-value=1.2 Score=34.43 Aligned_cols=84 Identities=6% Similarity=0.145 Sum_probs=60.1
Q ss_pred EEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy13856 135 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVS 214 (271)
Q Consensus 135 ~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~ 214 (271)
+.+.+-.+.+..++|+|. ++.+++....++.|...|.. ++.+....+.+. ...-.+++.+++.++++.-.++.+.
T Consensus 20 ~~l~g~~~~lSGla~~~~---~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQ---SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp EECTTCCSCEEEEEEETT---TTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEE
T ss_pred eECCCcccCcceeEEeCC---CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEE
Confidence 345566678999999995 45677778889999999987 554212222332 4577788888888777665678999
Q ss_pred EEEeCCCCc
Q psy13856 215 LWKENTDGA 223 (271)
Q Consensus 215 iw~~~~~~~ 223 (271)
++++...+.
T Consensus 95 ~~~v~~~~~ 103 (255)
T 3qqz_A 95 VISLTPNSE 103 (255)
T ss_dssp EEEECTTCC
T ss_pred EEEcCCCCe
Confidence 999887654
No 273
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.29 E-value=0.34 Score=43.61 Aligned_cols=81 Identities=7% Similarity=-0.037 Sum_probs=47.2
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec--cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.....|+++|. .+.++++-+..+.|..+++..... ...+. ........+++..+ .++++....+.|..++..
T Consensus 540 ~~PnGlavd~~---~~~LY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 540 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCCCEEECTT---TCCEEEEETTTTEEEEECSSSSCC--EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CCccEEEEecc---CCEEEEEecCCCeEEEEccCCCce--EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 34567999985 456666666778899999865332 11221 11122344555443 444455556789988876
Q ss_pred CCCceeEEEEec
Q psy13856 220 TDGAWQCITEMG 231 (271)
Q Consensus 220 ~~~~~~~~~~~~ 231 (271)
++ +.+..+.
T Consensus 614 ~G---~~~~~i~ 622 (699)
T 1n7d_A 614 TG---SDVNLLA 622 (699)
T ss_dssp TE---EEEECCC
T ss_pred CC---CceEEee
Confidence 55 4444443
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.12 E-value=1.7 Score=34.31 Aligned_cols=112 Identities=12% Similarity=-0.032 Sum_probs=65.0
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEE
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRD 146 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~ 146 (271)
..+++|+++++.+++-..++.|..++. . +.. ..... -......
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~---~-g~~------------------------------~~~~~---~~~~p~g 76 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITP---D-GNQ------------------------------QIHAT---VEGKVSG 76 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT---T-CCE------------------------------EEEEE---CSSEEEE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECC---C-Cce------------------------------EEEEe---CCCCcee
Confidence 578999999987777667788877774 1 111 11111 1235778
Q ss_pred EEEccCCCCCCcEEEEEeC-CC-eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 147 VAWAPSWGLSKCMIASCSQ-DR-KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~~-dg-~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
+++++ +++++++... ++ .|..+|..+++....... ........++..+++..+++...++.|+.+|...
T Consensus 77 ia~~~----dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 77 LAFTS----NGDLVATGWNADSIPVVSLVKSDGTVETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp EEECT----TSCEEEEEECTTSCEEEEEECTTSCEEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred EEEcC----CCcEEEEeccCCcceEEEEcCCCCeEEEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 99999 5776665543 23 466677666653111111 1122334555555555555554578888888653
No 275
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.01 E-value=1.8 Score=34.08 Aligned_cols=74 Identities=9% Similarity=-0.040 Sum_probs=42.7
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+.+ ++.+++.|+.+ ..+.+||+.+ ..|..
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~~ 277 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET-DKWVA 277 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT-TEEEE
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC-CeEEe
Confidence 5667776653 3588899887542111111111112222222 66777888754 4688899875 48998
Q ss_pred EEEeccc
Q psy13856 227 ITEMGKT 233 (271)
Q Consensus 227 ~~~~~~~ 233 (271)
+..+...
T Consensus 278 ~~~~~~~ 284 (306)
T 3ii7_A 278 NSKVRAF 284 (306)
T ss_dssp EEEEECC
T ss_pred CCCcccc
Confidence 8776543
No 276
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.93 E-value=1.8 Score=33.95 Aligned_cols=69 Identities=19% Similarity=0.264 Sum_probs=38.4
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC-----cEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-----SVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~-----~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+ ..++.+++.|+.++ .+.+||+.++ .|..
T Consensus 205 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W~~ 281 (302)
T 2xn4_A 205 NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTTD-KWTV 281 (302)
T ss_dssp TEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTT-EEEE
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE--EECCEEEEECCcCCCcccccEEEEcCCCC-eEEE
Confidence 5677777764 36889998875421111111111111112 23667777777553 4889998754 6766
Q ss_pred EE
Q psy13856 227 IT 228 (271)
Q Consensus 227 ~~ 228 (271)
+.
T Consensus 282 ~~ 283 (302)
T 2xn4_A 282 VS 283 (302)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.72 E-value=2.1 Score=34.05 Aligned_cols=74 Identities=14% Similarity=-0.093 Sum_probs=46.1
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....++++|. ++.++.+.... +.|...++..... .......-...+.+++++++..|..+. ..+.|..++++
T Consensus 120 ~~P~~iavdp~---~g~ly~~d~~~~~~I~~~~~dG~~~--~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 120 SKPRAIVVDPV---HGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp CCEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCCE--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEeCCC---CCEEEEEccCCCCeEEEEcCCCCCe--EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 45678999985 45555554443 6788888754331 112222234678899998766665554 45688888876
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 195 g 195 (316)
T 1ijq_A 195 G 195 (316)
T ss_dssp S
T ss_pred C
Confidence 3
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.71 E-value=2.1 Score=34.04 Aligned_cols=79 Identities=8% Similarity=-0.044 Sum_probs=48.7
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec--cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.....++++|. ++.+..+-...+.|..+|+..... ..... ........+++. .+.++.+....+.|..++..
T Consensus 164 ~~P~gla~d~~---~~~lY~~D~~~~~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 164 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecc---CCEEEEEECCCCeEEEEecCCCce--EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 45678999984 355556666678999999875332 11222 122345677774 35555555567889988876
Q ss_pred CCCceeE
Q psy13856 220 TDGAWQC 226 (271)
Q Consensus 220 ~~~~~~~ 226 (271)
++.....
T Consensus 238 ~g~~~~~ 244 (316)
T 1ijq_A 238 TGSDVNL 244 (316)
T ss_dssp TCCCCEE
T ss_pred CCcceEE
Confidence 5543333
No 279
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.66 E-value=1.5 Score=36.70 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=53.5
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCce----------eeeeeecc------CCCCeEEEEEecC---CCE
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT----------WTPFIMNT------FDDVVWNVSWSLT---GDI 203 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~----------~~~~~~~~------h~~~v~~v~~~~~---g~~ 203 (271)
.|..+..+| +|.+||..+ +..|.|-.+..+.. .....+.- ...+|..+.|+|- +..
T Consensus 67 ~i~qlvlSp----sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~ 141 (452)
T 3pbp_A 67 DTFHVISST----SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSC 141 (452)
T ss_dssp TTCEEEECT----TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCE
T ss_pred ceeEEEECC----CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCe
Confidence 577899999 699998887 55788888763221 11112221 2467999999995 578
Q ss_pred EEEEECCCcEEEEEeCC
Q psy13856 204 LTVSCGDNSVSLWKENT 220 (271)
Q Consensus 204 l~s~s~D~~v~iw~~~~ 220 (271)
|++-..|++|++||+..
T Consensus 142 LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 142 IVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEEEETTSCEEEEETTC
T ss_pred EEEEecCCEEEEEEccc
Confidence 99999999999999985
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.51 E-value=0.67 Score=40.57 Aligned_cols=55 Identities=5% Similarity=0.015 Sum_probs=36.0
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
.++.+..||..+++. .-... +...+....+...+..++.++.|+.|+.||.+++.
T Consensus 442 ~~g~l~a~D~~tG~~--~W~~~-~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKA--KWTKW-EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CCEEEEEECTTTCCE--EEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCCeEEEEECCCCCE--EEEec-CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 358899999988774 22222 12222222233446677789999999999998873
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.24 E-value=4.8 Score=36.72 Aligned_cols=74 Identities=14% Similarity=-0.093 Sum_probs=44.7
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....|+++|. .+.++.+-... +.|...++..... ...+...-...+.|++++.+..|+.+. ..+.|...+++
T Consensus 514 ~~P~gIaVDp~---~g~LYwtD~g~~~~I~~~~~dG~~~--~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 514 SKPRAIVVDPV---HGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp CCEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCCE--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEecC---CCCEEEecCCCCCeEEEEecCCCce--EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 45678889884 34554444333 6788888765432 222333335678889987666555554 35567777765
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 589 G 589 (791)
T 3m0c_C 589 G 589 (791)
T ss_dssp S
T ss_pred C
Confidence 3
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.07 E-value=2.8 Score=33.50 Aligned_cols=74 Identities=16% Similarity=-0.050 Sum_probs=43.7
Q ss_pred cceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....++++|. .+.++.+-. ..+.|...++..... .......-...+.++++|++..|..+. ..+.|..++++
T Consensus 122 ~~P~giavdp~---~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 122 DQPRAIALDPS---SGFMYWTDWGEVPKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SSEEEEEEEGG---GTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCccEEEEeCC---CCEEEEEecCCCCEEEEEEcCCCCe--EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 45578888884 344444432 357788887764331 122222234567899998665555554 46678888875
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 197 G 197 (318)
T 3sov_A 197 G 197 (318)
T ss_dssp S
T ss_pred C
Confidence 3
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.03 E-value=4.4 Score=35.65 Aligned_cols=55 Identities=11% Similarity=0.060 Sum_probs=34.7
Q ss_pred CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC
Q psy13856 165 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 165 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~ 222 (271)
.+|.+..||..+++. .-... +..++..-.....+..++.++.|+.++.||.+++.
T Consensus 451 ~~G~l~A~D~~tG~~--~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 451 GLGQIKAYNAITGDY--KWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CCEEEEEECTTTCCE--EEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCeEEEEECCCCCE--EeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 357888999988774 11111 11122111123356778889999999999999884
No 284
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.84 E-value=3.3 Score=33.76 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=46.4
Q ss_pred cceEEEEEccCCCCCCcEEEE-EeCCCeEEEEEcCCC-ceeeeeeeccCCCCeEEEEEec-CCCEEEEEECC-CcEEEEE
Q psy13856 142 DWVRDVAWAPSWGLSKCMIAS-CSQDRKVIIWTSNDY-VTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGD-NSVSLWK 217 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s-~~~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D-~~v~iw~ 217 (271)
..-+.++|+| |++.+.. -+..+.|..|++... .......+ ...+..-.++..+ +|++.+++..+ +.|..|+
T Consensus 221 ~~pNGia~sp----Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 221 DFANGINISP----DGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp SSEEEEEECT----TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred cccCcceECC----CCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 3457899999 6765544 446789999998743 22112233 3345677889999 59988766644 3444444
Q ss_pred eC
Q psy13856 218 EN 219 (271)
Q Consensus 218 ~~ 219 (271)
..
T Consensus 296 P~ 297 (355)
T 3sre_A 296 AE 297 (355)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.72 E-value=2.1 Score=35.94 Aligned_cols=75 Identities=12% Similarity=0.044 Sum_probs=40.9
Q ss_pred CCcceEEEEEccCCCCCCcEEEEEeC-CC----eEEEEEcCCCceeeeeeeccCCCCeEEEEEec-CCCEEEEEECCCcE
Q psy13856 140 HSDWVRDVAWAPSWGLSKCMIASCSQ-DR----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSV 213 (271)
Q Consensus 140 h~~~v~~v~~~p~~~~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~v 213 (271)
.......|++++ ++++|..+.. ++ .+...+.. +.......+.. ......++++| +|.++++-..++.|
T Consensus 177 ~~~~P~~ia~d~----~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V 250 (430)
T 3tc9_A 177 GLSKVRTICWTH----EADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQV 250 (430)
T ss_dssp CCSCEEEEEECT----TSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred CCCCcceEEEeC----CCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEE
Confidence 345577899998 5774444433 22 23334432 22110112221 22346678888 67766666667788
Q ss_pred EEEEeCC
Q psy13856 214 SLWKENT 220 (271)
Q Consensus 214 ~iw~~~~ 220 (271)
..++...
T Consensus 251 ~~~~~~~ 257 (430)
T 3tc9_A 251 FRYDFTT 257 (430)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888764
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.35 E-value=4.1 Score=33.67 Aligned_cols=77 Identities=8% Similarity=-0.043 Sum_probs=46.5
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc--CCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.....|+++|. .+.+..+-...+.|..+|+..... ...... .-.....+++. .+.++.+....+.|..++..
T Consensus 246 ~~P~glavd~~---~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 246 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCCC--EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS
T ss_pred CceEEEEEEeC---CCEEEEEECCCCEEEEEeCCCCcc--EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC
Confidence 46678999984 345555555678899999865442 122221 22344566663 34455555567789888866
Q ss_pred CCCce
Q psy13856 220 TDGAW 224 (271)
Q Consensus 220 ~~~~~ 224 (271)
++...
T Consensus 320 ~G~~~ 324 (400)
T 3p5b_L 320 TGSDV 324 (400)
T ss_dssp SCCCC
T ss_pred CCCce
Confidence 55433
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.15 E-value=2.9 Score=36.66 Aligned_cols=60 Identities=7% Similarity=0.094 Sum_probs=37.9
Q ss_pred CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 166 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
+|.|..||..+++. .-..... .++..-.....+..++.++.|+.++.||.+++ +.+.+++
T Consensus 465 ~G~l~A~D~~tG~~--~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG---~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKV--VWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG---KELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCE--EEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTC---CEEEEEE
T ss_pred cceEEEEECCCCCE--EEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCC---CEEEEec
Confidence 68899999998874 2222111 12221112234677888999999999999988 4444443
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.15 E-value=4.4 Score=33.51 Aligned_cols=74 Identities=14% Similarity=-0.096 Sum_probs=46.8
Q ss_pred cceEEEEEccCCCCCCcEEEEEeC-CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
.....|+++|. .+.++.+-.. .+.|...++..... .......-...+.+++++++..|..+. ..+.|..++++
T Consensus 202 ~~P~~iavdp~---~g~ly~td~~~~~~I~~~~~dG~~~--~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 202 SKPRAIVVDPV---HGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp CCEEEEEEETT---TTEEEEEECSSSCCEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEecc---cCeEEEEeCCCCCEEEEEeCCCCcc--EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 44678999985 3555554433 46788888765432 222233335678899998776666654 45678888876
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 277 G 277 (400)
T 3p5b_L 277 G 277 (400)
T ss_dssp S
T ss_pred C
Confidence 4
No 289
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.06 E-value=3.5 Score=32.22 Aligned_cols=71 Identities=20% Similarity=0.147 Sum_probs=38.9
Q ss_pred CcEEEEEeCC-------CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCce
Q psy13856 157 KCMIASCSQD-------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAW 224 (271)
Q Consensus 157 ~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~ 224 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+. .++.+++.|+.+ ..+.+||+.+ ..|
T Consensus 156 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W 232 (302)
T 2xn4_A 156 GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTT-NAW 232 (302)
T ss_dssp TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTT-TEE
T ss_pred CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCC-CCE
Confidence 5666666643 348889987754211111111111112222 256777777654 3688999875 478
Q ss_pred eEEEEe
Q psy13856 225 QCITEM 230 (271)
Q Consensus 225 ~~~~~~ 230 (271)
..+..+
T Consensus 233 ~~~~~~ 238 (302)
T 2xn4_A 233 RQVADM 238 (302)
T ss_dssp EEECCC
T ss_pred eeCCCC
Confidence 776544
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.89 E-value=5 Score=33.62 Aligned_cols=158 Identities=8% Similarity=-0.064 Sum_probs=81.2
Q ss_pred CCCEEEEccCCCeEEeccc----e-eeeccc--cccccccceEEEEcCCCCeEE-EEeCCCcEEEEEeecCCCCceeecc
Q psy13856 34 IGHTLISCDTQAHIGIRST----I-SLLQGS--VYLRRESNKAGALSPKLNRSA-TSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 34 ~g~~l~s~s~d~~i~lwd~----~-~~~~~h--~~~~~~~i~~~~~s~~~~~l~-s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
+|.++++-..++.|+.++. + ..+... ... ...++|+|+++.|. +-...+.|+.++.. ..++......
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~----~~~ia~dpdG~~LYvad~~~~~I~~~~~d-~~~~~~~~~~ 313 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS----NFHIVWHPTGDWAYIIYNGKHCIYRVDYN-RETGKLAVPY 313 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS----CEEEEECTTSSEEEEEETTTTEEEEEEBC-TTTCCBCCCE
T ss_pred CCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC----cccEEEeCCCCEEEEEeCCCCEEEEEeCC-CCCcccCcEE
Confidence 6777767667788888877 1 222111 112 34699999998554 44556778777752 0112111000
Q ss_pred ceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEE---------ccCCCCCCcEEEEEeCCCeEEEEEcCC
Q psy13856 106 YFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAW---------APSWGLSKCMIASCSQDRKVIIWTSND 176 (271)
Q Consensus 106 ~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~---------~p~~~~~~~~l~s~~~dg~i~iwd~~~ 176 (271)
.+....+ ..+ +.--......-..-..+++ .+ ++.++++-...+.|+.++. +
T Consensus 314 ----~~ag~~g----------~~g-~~dg~~~~a~~~~P~giav~~n~~y~~dd~----~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 314 ----IVCGQHS----------SPG-WVDGMGTGARLWGPNQGIFVKNEAYAGEED----EYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp ----EEEECTT----------CCC-CBCEEGGGSBCSSEEEEEEEECGGGTTSSC----CEEEEEEETTTTEEEEECT-T
T ss_pred ----EEEecCC----------CCc-cCCCcccceEEcCCccEEEEccccccccCC----CCcEEEEECCCCEEEEECC-C
Confidence 0000000 000 0000000001123456787 55 5677777777788888875 3
Q ss_pred CceeeeeeeccC------------------CCCeEEEEEe-cCCCEEEEEECCCcEEEEEeC
Q psy13856 177 YVTWTPFIMNTF------------------DDVVWNVSWS-LTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 177 ~~~~~~~~~~~h------------------~~~v~~v~~~-~~g~~l~s~s~D~~v~iw~~~ 219 (271)
+. +..+.+. -.....|+++ ++|.++++-...+.|+.++++
T Consensus 374 G~---v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GR---VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SE---EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC---EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 32 2222111 1236789999 566666666667788877764
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.70 E-value=2.7 Score=36.74 Aligned_cols=23 Identities=9% Similarity=-0.025 Sum_probs=19.6
Q ss_pred CcEEEEEeCCCeEEEEEcCCCce
Q psy13856 157 KCMIASCSQDRKVIIWTSNDYVT 179 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~~~ 179 (271)
+..++.++.|+.++.+|.++++.
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEECCCCCE
Confidence 45667789999999999999885
No 292
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.60 E-value=4.1 Score=32.04 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=41.5
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+. .++.+++.|+.+ ..+.+||+.+ ..|..
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~ 292 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDT-DTWSE 292 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTT-TEEEE
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCC-CEEee
Confidence 5677777664 468899988754211111111111112222 256777777654 4588899875 48988
Q ss_pred EEEecc
Q psy13856 227 ITEMGK 232 (271)
Q Consensus 227 ~~~~~~ 232 (271)
+..+..
T Consensus 293 ~~~~p~ 298 (308)
T 1zgk_A 293 VTRMTS 298 (308)
T ss_dssp EEECSS
T ss_pred cCCCCC
Confidence 766543
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.59 E-value=4.4 Score=32.35 Aligned_cols=79 Identities=4% Similarity=-0.079 Sum_probs=48.8
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
..-..++++|. ++.+..+=+..+.|..+|+..... .....+.......+++.. +.++.+-...+.|..++..++
T Consensus 166 ~~Pnglavd~~---~~~lY~aD~~~~~I~~~d~dG~~~--~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 166 YWPNGLTLDYE---EQKLYWADAKLNFIHKSNLDGTNR--QAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC--EEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCccEEEEecc---CCEEEEEECCCCEEEEEcCCCCce--EEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 34578999984 455556656678899999875332 222232334556777753 344555555788999988666
Q ss_pred CceeE
Q psy13856 222 GAWQC 226 (271)
Q Consensus 222 ~~~~~ 226 (271)
.....
T Consensus 240 ~~~~~ 244 (318)
T 3sov_A 240 EGLRE 244 (318)
T ss_dssp CSCEE
T ss_pred CceEE
Confidence 44333
No 294
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.55 E-value=4 Score=33.17 Aligned_cols=109 Identities=7% Similarity=-0.044 Sum_probs=59.4
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEE----ecCCCc
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETK----LENHSD 142 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~----~~~h~~ 142 (271)
.+.++|.|+|.++++--..|.|++++. ..+.. ..+.. +.....
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~---~~g~~------------------------------~~v~~~~~v~~~g~~ 80 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDA---KTGRK------------------------------TELGEVPGVSPSGEG 80 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECT---TTCCE------------------------------EEEEECTTCCCBTTB
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEEC---CCCcE------------------------------eeecccCceeecCCC
Confidence 689999999987777654888887764 22221 11111 112345
Q ss_pred ceEEEEEccCCCCCCcEEEE--EeCCCeEEEEEcCCC-----c---e-eeeeeec-cCCCCeEEEEEecCCCEEEEEE
Q psy13856 143 WVRDVAWAPSWGLSKCMIAS--CSQDRKVIIWTSNDY-----V---T-WTPFIMN-TFDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s--~~~dg~i~iwd~~~~-----~---~-~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s 208 (271)
....|+++|++..++.+.++ ...++.|.-|..... . . .....+. ........+.|.|||.+.++.+
T Consensus 81 GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 81 GLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 67889999831112444333 224556666666541 1 1 0011111 1111345799999998777654
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.50 E-value=0.95 Score=40.67 Aligned_cols=73 Identities=15% Similarity=-0.054 Sum_probs=42.0
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCC-CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEE-EEEECCCcEEEEEeCC
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENT 220 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s~D~~v~iw~~~~ 220 (271)
....|+++|. .+.++.+-... +.|.++++..... .......-...+.|+|+|++..| ++-+..+.|..++++.
T Consensus 497 ~P~giavDp~---~g~ly~td~~~~~~I~~~~~dG~~~--~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 497 KPRAIVVDPV---HGFMYWTDWGTPAKIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCCEECCSS---SSCCEECCCSSSCCEEBCCSSSCCC--CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CcceEEEccC---CCcEEEcccCCCCeEEEEeCCCCCe--eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3467888884 34444444333 6777777654321 11222222356789999875544 4444567888888763
No 296
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.09 E-value=8.7 Score=34.84 Aligned_cols=150 Identities=9% Similarity=-0.013 Sum_probs=84.1
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeeccc---cccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQGS---VYLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~~h---~~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
++|. |..|+.++-|..|+. +..+... .......|.++...++|+ |..|+.++-+..|+. .++......
T Consensus 319 ~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~---~~~~~~~~~ 393 (795)
T 4a2l_A 319 SQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNP---ITQRFTSYT 393 (795)
T ss_dssp TTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECT---TTCCEEEEC
T ss_pred CCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcC---CCCcEEEEe
Confidence 3454 445555566777765 2222211 011112378888888776 455777767778875 322211100
Q ss_pred ceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee
Q psy13856 106 YFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM 185 (271)
Q Consensus 106 ~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 185 (271)
. ... ... ..-....|.++...+ ++.+|..|+.++-+..+|..++.. ..+
T Consensus 394 -~-------------------~~~---~~~-~~l~~~~v~~i~~d~----~g~~lWigt~~~Gl~~~d~~~~~~---~~~ 442 (795)
T 4a2l_A 394 -L-------------------QED---ESA-RGIGSNNIKAVYVDE----KKSLVYIGTHAGGLSILHRNSGQV---ENF 442 (795)
T ss_dssp -C-------------------C----------CCSCSCEEEEEEET----TTTEEEEEETTTEEEEEETTTCCE---EEE
T ss_pred -c-------------------CCC---Ccc-cCCCCccEEEEEEcC----CCCEEEEEeCcCceeEEeCCCCcE---EEe
Confidence 0 000 000 001235788998887 477455667767799999887653 222
Q ss_pred c-----cCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 186 N-----TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 186 ~-----~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
. .....|.++...++|.+.+.. .+ -|.+|+..+
T Consensus 443 ~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQ 480 (795)
T ss_dssp CTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTT
T ss_pred ecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCC
Confidence 2 124578999988888866554 34 588888764
No 297
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.02 E-value=4.7 Score=31.67 Aligned_cols=71 Identities=18% Similarity=0.125 Sum_probs=39.4
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+.+ ++.+++.|+.+ ..+.+||+.+ ..|..
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~ 245 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET-ETWTF 245 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TEEEE
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC-CcEEE
Confidence 5677777654 4588889877542111111111111122222 56777777654 5689999875 47877
Q ss_pred EEEe
Q psy13856 227 ITEM 230 (271)
Q Consensus 227 ~~~~ 230 (271)
+..+
T Consensus 246 ~~~~ 249 (308)
T 1zgk_A 246 VAPM 249 (308)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.96 E-value=4.7 Score=31.55 Aligned_cols=71 Identities=10% Similarity=0.077 Sum_probs=37.4
Q ss_pred CcEEEEEeC---------CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCC
Q psy13856 157 KCMIASCSQ---------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDG 222 (271)
Q Consensus 157 ~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~ 222 (271)
+.+++.|+. -..+.+||..+..-.....+......-..+. -++.+++.|+.+ ..+.+||+.+ .
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~-~ 226 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF--VKDKIFAVGGQNGLGGLDNVEYYDIKL-N 226 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTEEBCCEEEEETTT-T
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEE--ECCEEEEEeCCCCCCCCceEEEeeCCC-C
Confidence 566666653 3447889988754211111111111111222 256677776643 4588898875 4
Q ss_pred ceeEEEEe
Q psy13856 223 AWQCITEM 230 (271)
Q Consensus 223 ~~~~~~~~ 230 (271)
.|..+..+
T Consensus 227 ~W~~~~~~ 234 (306)
T 3ii7_A 227 EWKMVSPM 234 (306)
T ss_dssp EEEECCCC
T ss_pred cEEECCCC
Confidence 78776544
No 299
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.92 E-value=6.6 Score=33.16 Aligned_cols=27 Identities=11% Similarity=-0.074 Sum_probs=19.3
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEe
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGT 93 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~ 93 (271)
.++++|.|+|+++++-...+.|++++.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~ 55 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNP 55 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECT
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEEC
Confidence 689999999987766533346766664
No 300
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=90.91 E-value=9 Score=34.72 Aligned_cols=175 Identities=10% Similarity=-0.027 Sum_probs=91.8
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeecccc-----ccccccceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceee
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQGSV-----YLRRESNKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQ 103 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~~h~-----~~~~~~i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~ 103 (271)
++|. |..|..++-|..|+. ...+.... ......|.++...++++.|..|+.++-+..++. .+++...
T Consensus 366 ~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~---~~~~~~~ 441 (795)
T 4a2l_A 366 KDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR---NSGQVEN 441 (795)
T ss_dssp TTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET---TTCCEEE
T ss_pred CCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC---CCCcEEE
Confidence 3444 445666667777876 22221110 011123888888888875677777777888886 4443322
Q ss_pred cc---------ceeeEEEeeccceee----eEEEE-eeCCceEEeEEe----cCCCcceEEEEEccCCCCCCcEEEEEeC
Q psy13856 104 PK---------YFKLTVYSTKLTRIL----ILVRI-CGGDKWIEETKL----ENHSDWVRDVAWAPSWGLSKCMIASCSQ 165 (271)
Q Consensus 104 ~~---------~~~~~~~~~~~~~l~----~~v~i-~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~~~l~s~~~ 165 (271)
.. ..........+...+ +..++ ...+.+...... .-....|.++...+ ++.+.+...
T Consensus 442 ~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~----~g~lWigt~- 516 (795)
T 4a2l_A 442 FNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS----HKRLWIGGE- 516 (795)
T ss_dssp ECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT----TCCEEEEES-
T ss_pred eecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECC----CCCEEEEeC-
Confidence 11 011111122244333 33333 223322221111 01235788998888 466655444
Q ss_pred CCeEEEEEcCCCceeeeee---e-ccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 166 DRKVIIWTSNDYVTWTPFI---M-NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 166 dg~i~iwd~~~~~~~~~~~---~-~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
. -+..||..+... .... . ......|.++...++|.+.+... . -|..|+..+
T Consensus 517 ~-Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~ 571 (795)
T 4a2l_A 517 E-GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKD 571 (795)
T ss_dssp S-CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTT
T ss_pred C-ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCC
Confidence 4 488888766542 1100 0 11235789999989988665543 3 577888654
No 301
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.88 E-value=2.4 Score=32.14 Aligned_cols=63 Identities=10% Similarity=0.044 Sum_probs=40.3
Q ss_pred eEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc--eeee--eee-ccCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy13856 144 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--TWTP--FIM-NTFDDVVWNVSWSLTGDILTVSCGDNSVS 214 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~--~~~-~~h~~~v~~v~~~~~g~~l~s~s~D~~v~ 214 (271)
..++.|.| ++.+.++ .||.|+-++..+.. .|.- ..+ ..-=..+..|.|.|+|.+.+.. |+.++
T Consensus 90 F~a~~fD~----~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 90 FQFLFFDP----NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CSEEEECT----TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ceEEEECC----CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 56899999 5787777 56988877753322 1100 011 1111467899999999987777 77654
No 302
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.78 E-value=5.1 Score=31.59 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=37.2
Q ss_pred CcEEEEEeCCC-----eEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC--------------CcEEEEE
Q psy13856 157 KCMIASCSQDR-----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD--------------NSVSLWK 217 (271)
Q Consensus 157 ~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D--------------~~v~iw~ 217 (271)
+.+++.|+.++ .+.+||..+..-.....+.........+. .++.+++.|+.+ ..+.+||
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYN 274 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEec
Confidence 56777777654 58888887754211111111111112222 256777777753 2477888
Q ss_pred eCCCCceeEE
Q psy13856 218 ENTDGAWQCI 227 (271)
Q Consensus 218 ~~~~~~~~~~ 227 (271)
+.+ ..|..+
T Consensus 275 ~~~-~~W~~~ 283 (315)
T 4asc_A 275 EEE-KKWEGV 283 (315)
T ss_dssp TTT-TEEEEE
T ss_pred CCC-Chhhhh
Confidence 775 478877
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=90.70 E-value=5.9 Score=32.23 Aligned_cols=153 Identities=8% Similarity=0.008 Sum_probs=89.9
Q ss_pred CCeEEeccc------eeeeccc--c-ccccccceEEEE--cCC-CC-eEEEEeCCCcEEEEEeecCCCCceeeccceeeE
Q psy13856 44 QAHIGIRST------ISLLQGS--V-YLRRESNKAGAL--SPK-LN-RSATSSFHEAAKHLGTVQSSSPACLQPKYFKLT 110 (271)
Q Consensus 44 d~~i~lwd~------~~~~~~h--~-~~~~~~i~~~~~--s~~-~~-~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~ 110 (271)
+++|++|++ +..+..- . .....++..+++ +|. +. +++....++.+..|++.....+..
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~--------- 168 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI--------- 168 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE---------
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc---------
Confidence 589999955 2222110 0 011134777888 664 43 677788889998888742111111
Q ss_pred EEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc--e-eeeeee-c
Q psy13856 111 VYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--T-WTPFIM-N 186 (271)
Q Consensus 111 ~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~--~-~~~~~~-~ 186 (271)
..+.++++.- .+.+..+...+ ....|..+-++.-|..++.+... . ..+..+ .
T Consensus 169 -------------------~~~lVR~f~l-gsq~EgcvvDd----~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~ 224 (355)
T 3amr_A 169 -------------------SGKKVRAFKM-NSQTEGMAADD----EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG 224 (355)
T ss_dssp -------------------EEEEEEEEEC-SSCEEEEEEET----TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS
T ss_pred -------------------cceEEEEecC-CCCcceEEEcC----CCCeEEEecccceEEEEeCCcCCCCCceEEEEecC
Confidence 1145555553 35788899998 47788888888777777754221 1 112222 1
Q ss_pred cC-CCCeEEEEE--ecCCC-EEEEEE-CCCcEEEEEeCCCCceeEEEEec
Q psy13856 187 TF-DDVVWNVSW--SLTGD-ILTVSC-GDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 187 ~h-~~~v~~v~~--~~~g~-~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
++ ...+-.++. .++++ +|++++ .+++..+||... .++.+.++.
T Consensus 225 g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~--~~~~vg~f~ 272 (355)
T 3amr_A 225 RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG--KNKYVADFR 272 (355)
T ss_dssp SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST--TCCEEEEEE
T ss_pred CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC--CCcEEEEEE
Confidence 22 246777777 45555 666666 578999999862 235555553
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.77 E-value=7 Score=31.68 Aligned_cols=109 Identities=7% Similarity=-0.139 Sum_probs=58.0
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEE
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRD 146 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~ 146 (271)
...++|.|+|++++ +..++.|++++. .+. ... ..+............
T Consensus 31 P~~ia~~pdG~l~V-~e~~g~I~~~d~----~G~--~~~--------------------------~~~~v~~~g~~g~~g 77 (354)
T 3a9g_A 31 PWSIAPLGGGRYLV-TERPGRLVLISP----SGK--KLV--------------------------ASFDVANVGEAGLLG 77 (354)
T ss_dssp EEEEEEEETTEEEE-EETTTEEEEECS----SCE--EEE--------------------------EECCCCCSTTCSEEE
T ss_pred CeEEEEcCCCeEEE-EeCCCEEEEEeC----CCc--eEe--------------------------eccceeecCCCceee
Confidence 68999999997554 456688877752 121 100 000011112345788
Q ss_pred EEEccCCCCCCcEEEEEeC---C----CeEEEEEcCCC--ce--ee--eeeecc-CCCCeEEEEEecCCCEEEEEE
Q psy13856 147 VAWAPSWGLSKCMIASCSQ---D----RKVIIWTSNDY--VT--WT--PFIMNT-FDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 147 v~~~p~~~~~~~~l~s~~~---d----g~i~iwd~~~~--~~--~~--~~~~~~-h~~~v~~v~~~~~g~~l~s~s 208 (271)
|+++|.+..++.+.++-+. + ..|..|+.... .. .. ...+.. .......++|.|+|.+.++.+
T Consensus 78 ia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 78 LALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 9999932222455454432 3 56777776643 10 00 111111 111346799999998766644
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.25 E-value=7.5 Score=31.31 Aligned_cols=114 Identities=5% Similarity=-0.036 Sum_probs=68.9
Q ss_pred ceEEEEcCCCCeEEEEe-CCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecC----C-
Q psy13856 67 NKAGALSPKLNRSATSS-FHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLEN----H- 140 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~----h- 140 (271)
.-+++|++....+..++ ..++|..|+. ..+.... + .+.+ .
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~---~~~~~~~------------------------------~-~~~~~s~~g~ 60 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNP---KTQSHFN------------------------------V-VIDGASSNGD 60 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECT---TTCCEEE------------------------------E-CCTTTCCSSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcC---CCCeEEE------------------------------E-ecCCccccCC
Confidence 34789988555555555 7899988886 2121111 1 1211 0
Q ss_pred -CcceEEEEE---ccCCCCCCcEEEEEe-------------CCCeEEEEEcC---CCceeeeeeeccC-----------C
Q psy13856 141 -SDWVRDVAW---APSWGLSKCMIASCS-------------QDRKVIIWTSN---DYVTWTPFIMNTF-----------D 189 (271)
Q Consensus 141 -~~~v~~v~~---~p~~~~~~~~l~s~~-------------~dg~i~iwd~~---~~~~~~~~~~~~h-----------~ 189 (271)
...+..|.| .| ++.++++.. .+..+..||+. +++......+... .
T Consensus 61 ~~~~~sGl~~~~~D~----~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~ 136 (334)
T 2p9w_A 61 GEQQMSGLSLLTHDN----SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP 136 (334)
T ss_dssp CSEEEEEEEESSSSS----CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC
T ss_pred CcceeeEEEEeccCC----CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc
Confidence 113478999 67 567776533 26889999998 5543112222211 1
Q ss_pred CCeEEEEEecCCCEEEEEECC-CcEEEEEe
Q psy13856 190 DVVWNVSWSLTGDILTVSCGD-NSVSLWKE 218 (271)
Q Consensus 190 ~~v~~v~~~~~g~~l~s~s~D-~~v~iw~~ 218 (271)
...+.++..++|+..++++.- +.|...+.
T Consensus 137 ~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 137 FGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp EEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred cCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 247899999999999988877 66544443
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.13 E-value=10 Score=33.09 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=31.6
Q ss_pred CcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCC-eEEEEEecCCC-EEEEEEC
Q psy13856 157 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV-VWNVSWSLTGD-ILTVSCG 209 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~-v~~v~~~~~g~-~l~s~s~ 209 (271)
+.+++.|+.|+.++.||.++++. +-.+...... ..-+.|..+|+ |+++.+.
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~--lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKE--LWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCCE--EEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 56777799999999999999885 3333322211 11255667775 4544443
No 307
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=88.63 E-value=14 Score=33.47 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=44.2
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec---cCCCCeEEEEEecCCCEEEEEECCCcEEEEE
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN---TFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 217 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~ 217 (271)
...|.++...+ ++.+.+. +. +-+..+|..+.......... .....|.++...++|.+.+....+| |..|+
T Consensus 449 ~~~v~~i~~d~----~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 449 LLDVRVFYEDK----NKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp CCCEEEEEECT----TSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEEC
T ss_pred CCeEEEEEECC----CCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEe
Confidence 46788888887 4555444 44 45888998765531111111 1135789999988888665443344 77777
Q ss_pred eCC
Q psy13856 218 ENT 220 (271)
Q Consensus 218 ~~~ 220 (271)
.+.
T Consensus 522 ~~~ 524 (781)
T 3v9f_A 522 PDM 524 (781)
T ss_dssp TTC
T ss_pred CCC
Confidence 653
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.56 E-value=8.6 Score=31.08 Aligned_cols=106 Identities=8% Similarity=-0.106 Sum_probs=57.7
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeeccceeeEEEeeccceeeeEEEEeeCCceEEeE---EecCCCcc
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEET---KLENHSDW 143 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~---~~~~h~~~ 143 (271)
...++|.|+|+++++ ..++.|++++. . .. ..+. .+......
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~~---g--~~------------------------------~~~~~~~v~~~g~~~ 76 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFRE---G--RL------------------------------STYAELSVYHRGESG 76 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEET---T--EE------------------------------EEEEECCCCCSTTCS
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEEC---C--Cc------------------------------cEeecceEeecCCCC
Confidence 689999999985554 56688877762 1 10 1111 11122345
Q ss_pred eEEEEEccCCCCCCcEEEEEeCC-----CeEEEEEcCCCceee----eeeec---cCCCCeEEEEEecCCCEEEEEE
Q psy13856 144 VRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWT----PFIMN---TFDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~----~~~~~---~h~~~v~~v~~~~~g~~l~s~s 208 (271)
...|+++|.+..++.+.++-..+ +.|..++......-. ...+. +.......++|.|+|.+.++.+
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 78899999321114444444432 678888876432100 11122 1111236899999997666543
No 309
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.98 E-value=9.7 Score=29.95 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=36.8
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC--------------CcEEEEE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD--------------NSVSLWK 217 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D--------------~~v~iw~ 217 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+ ..++.+++.|+.+ ..+.+||
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred CEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEe
Confidence 5666666643 35778888775421111111111111122 2356677776643 3588888
Q ss_pred eCCCCceeEE
Q psy13856 218 ENTDGAWQCI 227 (271)
Q Consensus 218 ~~~~~~~~~~ 227 (271)
+.+ ..|..+
T Consensus 285 ~~~-~~W~~~ 293 (318)
T 2woz_A 285 DDK-KEWAGM 293 (318)
T ss_dssp TTT-TEEEEE
T ss_pred CCC-CEehhh
Confidence 875 478877
No 310
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.89 E-value=11 Score=30.26 Aligned_cols=21 Identities=19% Similarity=0.364 Sum_probs=13.3
Q ss_pred cEEEEEeCCCCceeEEEEeccc
Q psy13856 212 SVSLWKENTDGAWQCITEMGKT 233 (271)
Q Consensus 212 ~v~iw~~~~~~~~~~~~~~~~~ 233 (271)
.+.+||+.+ ..|..+..+...
T Consensus 286 ~~~~yd~~~-~~W~~~~~~p~~ 306 (357)
T 2uvk_A 286 STDIHLWHN-GKWDKSGELSQG 306 (357)
T ss_dssp CCEEEECC----CEEEEECSSC
T ss_pred eEEEEecCC-CceeeCCCCCCC
Confidence 578899874 489888766543
No 311
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.36 E-value=10 Score=29.70 Aligned_cols=71 Identities=10% Similarity=0.150 Sum_probs=39.6
Q ss_pred CcEEEEEeC-C-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCC-----cEEEEEeCCCCcee
Q psy13856 157 KCMIASCSQ-D-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-----SVSLWKENTDGAWQ 225 (271)
Q Consensus 157 ~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~-----~v~iw~~~~~~~~~ 225 (271)
+.+++.|+. + ..+.+||..+..-.....+.........+ ..++.+++.|+.++ .+.+||+.+ ..|.
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~ 225 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITD-NKWA 225 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTT-TEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCC-CeEE
Confidence 567777775 2 46888998875421111111111111122 22667777777654 488888875 4788
Q ss_pred EEEEe
Q psy13856 226 CITEM 230 (271)
Q Consensus 226 ~~~~~ 230 (271)
.+..+
T Consensus 226 ~~~~~ 230 (315)
T 4asc_A 226 PFEAF 230 (315)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 77544
No 312
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=86.26 E-value=20 Score=32.76 Aligned_cols=77 Identities=9% Similarity=-0.060 Sum_probs=44.3
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc--CCCCeEEEEEecCCCEEEEE-ECCCcEEEEE
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVS-CGDNSVSLWK 217 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~-s~D~~v~iw~ 217 (271)
-.....|++++. .+.++.+=.....|...++..... ...+.. .-.....|++. +..|+.+ ...+.|...+
T Consensus 557 l~~P~GLavD~~---~~~LYwaD~~~~~I~~~d~dG~~~--~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 557 IQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp CSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC--EEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEecC---CCeEEEEeCCCCcEEEEecCCCce--EEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEe
Confidence 356788999975 455555555667899999865442 222222 12234456653 3344444 4467787777
Q ss_pred eCCCCce
Q psy13856 218 ENTDGAW 224 (271)
Q Consensus 218 ~~~~~~~ 224 (271)
..++...
T Consensus 630 k~tG~~~ 636 (791)
T 3m0c_C 630 RLTGSDV 636 (791)
T ss_dssp TTTCCCC
T ss_pred CCCCcce
Confidence 6555333
No 313
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.08 E-value=19 Score=32.29 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=41.8
Q ss_pred EEEEccCCCCCCcEEEEEeC--C-----CeEEEEEcCCCce-----eeee-eeccCCCCeEEEEEecCCCEEEEEEC---
Q psy13856 146 DVAWAPSWGLSKCMIASCSQ--D-----RKVIIWTSNDYVT-----WTPF-IMNTFDDVVWNVSWSLTGDILTVSCG--- 209 (271)
Q Consensus 146 ~v~~~p~~~~~~~~l~s~~~--d-----g~i~iwd~~~~~~-----~~~~-~~~~h~~~v~~v~~~~~g~~l~s~s~--- 209 (271)
++.+... ++.+++.|+. + ..+.+||..+... |... ........-.+++...++.+++.|+.
T Consensus 543 a~v~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~ 619 (695)
T 2zwa_A 543 GLEFDPV---SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPS 619 (695)
T ss_dssp EEEEETT---TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSS
T ss_pred EEEEeCC---CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCC
Confidence 3555552 3667777775 2 4588999887662 3221 11111111112223333677777774
Q ss_pred -----CCcEEEEEeCCCCcee
Q psy13856 210 -----DNSVSLWKENTDGAWQ 225 (271)
Q Consensus 210 -----D~~v~iw~~~~~~~~~ 225 (271)
...+.+||+.++ .|.
T Consensus 620 ~~~~~~~~v~~yd~~t~-~W~ 639 (695)
T 2zwa_A 620 GLFDRTNSIISLDPLSE-TLT 639 (695)
T ss_dssp CCCCTTTSEEEEETTTT-EEE
T ss_pred CCCCCCCeEEEEECCCC-eEE
Confidence 346999998754 676
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.74 E-value=11 Score=29.29 Aligned_cols=71 Identities=20% Similarity=0.114 Sum_probs=39.8
Q ss_pred CcEEEEEeCC-----CeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCceeE
Q psy13856 157 KCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQC 226 (271)
Q Consensus 157 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~~~ 226 (271)
+.+++.|+.+ ..+.+||..+..-.....+.........+. .++.+++.|+.+ ..+.+||+.+ ..|..
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~ 236 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRT-DSWTT 236 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT-TEEEE
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCC-CcEEE
Confidence 5677777654 458889987754211111111111112222 256777777654 4688999875 47877
Q ss_pred EEEe
Q psy13856 227 ITEM 230 (271)
Q Consensus 227 ~~~~ 230 (271)
+..+
T Consensus 237 ~~~~ 240 (301)
T 2vpj_A 237 VTSM 240 (301)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 7544
No 315
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=82.52 E-value=27 Score=31.26 Aligned_cols=72 Identities=6% Similarity=0.101 Sum_probs=43.0
Q ss_pred CcEEEEEeCCC--eEEEEEcCCCceeeeee----eccCCCCeEEEEEecC-CCEEEEEEC--C-----CcEEEEEeCCCC
Q psy13856 157 KCMIASCSQDR--KVIIWTSNDYVTWTPFI----MNTFDDVVWNVSWSLT-GDILTVSCG--D-----NSVSLWKENTDG 222 (271)
Q Consensus 157 ~~~l~s~~~dg--~i~iwd~~~~~~~~~~~----~~~h~~~v~~v~~~~~-g~~l~s~s~--D-----~~v~iw~~~~~~ 222 (271)
+.+++.|+.++ .+.+||..+.. |.... +........++.+..+ +.+++.|+. + +.+.+||+.++.
T Consensus 501 ~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 501 GNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 67777887654 68999988754 32211 1111112233555555 667777765 2 458899998764
Q ss_pred -----ceeEEEE
Q psy13856 223 -----AWQCITE 229 (271)
Q Consensus 223 -----~~~~~~~ 229 (271)
.|..+..
T Consensus 580 w~~~~~W~~~~~ 591 (695)
T 2zwa_A 580 ATEPITVIKKLQ 591 (695)
T ss_dssp SSCCEEEEEEEE
T ss_pred cccceEEEEcCC
Confidence 2777655
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.55 E-value=2.5 Score=32.01 Aligned_cols=68 Identities=9% Similarity=0.079 Sum_probs=42.7
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCce--ee--eeeec--cCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT--WT--PFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSL 215 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~--~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~v~i 215 (271)
..+..++|+| ++.+.+. .+|.+.-.+..+... |. -..+- +.. ...++.|.|+|.+.++ .||.|+-
T Consensus 41 ~~~~~laf~P----~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 41 SNFKFLFLSP----GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp TTCSEEEECT----TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEE
T ss_pred ccceeEEECC----CccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEE
Confidence 3667999999 5887766 677766666543221 00 00110 111 1478899999998877 4698887
Q ss_pred EEe
Q psy13856 216 WKE 218 (271)
Q Consensus 216 w~~ 218 (271)
++.
T Consensus 112 ~~p 114 (236)
T 1tl2_A 112 ASP 114 (236)
T ss_dssp ESC
T ss_pred eCC
Confidence 776
No 317
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.98 E-value=18 Score=28.32 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=38.5
Q ss_pred CCcEEEEEeC------CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECC-----CcEEEEEeCCCCce
Q psy13856 156 SKCMIASCSQ------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAW 224 (271)
Q Consensus 156 ~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----~~v~iw~~~~~~~~ 224 (271)
++.+++.|+. -..+.+||..+..-.....+.........+. -++.+++.|+.+ ..+.+||+.+ ..|
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W 234 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT-NKW 234 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTT-CCE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCC-CeE
Confidence 3566666664 2358899988754211111111111112222 256777777653 3477888875 478
Q ss_pred eEEEEe
Q psy13856 225 QCITEM 230 (271)
Q Consensus 225 ~~~~~~ 230 (271)
..+..+
T Consensus 235 ~~~~~~ 240 (318)
T 2woz_A 235 EVMTEF 240 (318)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 776544
No 318
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=80.75 E-value=32 Score=31.02 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=44.2
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec---c-CCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN---T-FDDVVWNVSWSLTGDILTVSCGDNSVSLW 216 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~-h~~~v~~v~~~~~g~~l~s~s~D~~v~iw 216 (271)
...|.++...+ ++.+.+.....| +..||...... ..+. + ....|.++...++|.+.++. .+|-+..|
T Consensus 494 ~~~i~~i~~d~----~g~lWigt~~~G-l~~~~~~~~~~---~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~ 564 (781)
T 3v9f_A 494 ENFVRSIAQDS----EGRFWIGTFGGG-VGIYTPDMQLV---RKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFP 564 (781)
T ss_dssp CSCEEEEEECT----TCCEEEEESSSC-EEEECTTCCEE---EEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEES
T ss_pred cceeEEEEEcC----CCCEEEEEcCCC-EEEEeCCCCeE---EEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEE
Confidence 35788898887 466555443345 77788766542 2222 1 13468899888888866554 35544777
Q ss_pred EeCC
Q psy13856 217 KENT 220 (271)
Q Consensus 217 ~~~~ 220 (271)
|..+
T Consensus 565 d~~~ 568 (781)
T 3v9f_A 565 SARN 568 (781)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7654
No 319
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=79.18 E-value=33 Score=30.26 Aligned_cols=73 Identities=11% Similarity=-0.072 Sum_probs=42.0
Q ss_pred cceEEEEEccCCCCCCcEEEEE-eCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASC-SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
....+|+++|. .+.++.+- +..+.|...++..... ..+...-...+.+++++++..|..+. ..+.|..++++
T Consensus 123 ~~P~~iavdp~---~G~lY~tD~g~~~~I~r~~~dG~~~---~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 123 DSPRALALDPA---EGFMYWTEWGGKPKIDRAAMDGSER---TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp CCEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCSC---EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcccEEEccC---CCeEEEeCCCCCCEEEEEeCCCCce---EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 34568888874 35544443 2246677777654432 22222334567888888665555554 35667777765
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 197 G 197 (628)
T 4a0p_A 197 G 197 (628)
T ss_dssp S
T ss_pred C
Confidence 4
No 320
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.12 E-value=41 Score=31.42 Aligned_cols=38 Identities=16% Similarity=0.290 Sum_probs=31.8
Q ss_pred CeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEec
Q psy13856 191 VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 191 ~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~ 231 (271)
.+.+++..++..++++-+.|+++|+|++.++ +++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~---~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN---QCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT---EEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC---CeEeeec
Confidence 5677777888899999999999999999987 6666554
No 321
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.92 E-value=27 Score=29.55 Aligned_cols=27 Identities=15% Similarity=-0.134 Sum_probs=21.6
Q ss_pred ceEEEEcCCCC-eEEEEeCCCcEEEEEe
Q psy13856 67 NKAGALSPKLN-RSATSSFHEAAKHLGT 93 (271)
Q Consensus 67 i~~~~~s~~~~-~l~s~s~d~~i~~~d~ 93 (271)
.+.++|.|++. .|+.+...|.|++++.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 67999999996 5666678999988863
No 322
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=75.89 E-value=41 Score=29.59 Aligned_cols=73 Identities=16% Similarity=-0.046 Sum_probs=38.2
Q ss_pred cceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEE-CCCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~v~iw~~~ 219 (271)
....+|+++|. .+.++.+-. ..+.|...++..... .......-...+.+++++++..|..+. ..+.|...+++
T Consensus 127 ~~P~~Iavdp~---~g~ly~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 127 DQPRAIALDPS---SGFMYWTDWGEVPKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp SCCCCEEEETT---TTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred CCCceEEEecC---CCeEEEeccCCCCEEEEEECCCCce--EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 34557888774 344444432 235666666553321 122222234567788887655554443 34566666654
No 323
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=75.51 E-value=24 Score=30.22 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=48.5
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc---CCCCeEEEEE-------ecCCCEEEEEECCC-
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT---FDDVVWNVSW-------SLTGDILTVSCGDN- 211 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---h~~~v~~v~~-------~~~g~~l~s~s~D~- 211 (271)
....|+|+|.. +++++++-...+.|++.|...... ...... .......++| +++|..|+.+...+
T Consensus 140 ~p~~la~dp~~--~~~Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLN--KDHLYICYDGHKAIQLIDLKNRML--SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTE--EEEEEEEEETEEEEEEEETTTTEE--EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCC--CCEEEEEECCCCeEEEEECCCCEE--EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 45689999820 345555555557788899887653 222221 1235889999 99999777666543
Q ss_pred ------cEEEEEeCCCCce
Q psy13856 212 ------SVSLWKENTDGAW 224 (271)
Q Consensus 212 ------~v~iw~~~~~~~~ 224 (271)
.|.+++...++.|
T Consensus 216 ~~~~~~~V~~i~r~~~G~~ 234 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTF 234 (496)
T ss_dssp TGGGEEEEEEEECCTTSCC
T ss_pred CcccCceEEEEecCCCCce
Confidence 2666654443444
No 324
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=75.17 E-value=42 Score=29.40 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=34.6
Q ss_pred CeEEEEEcCCCceeeeeeeccCC--------CCeEEEEEe-cCC---CEEEEEECCCcEEEEEeCCCC
Q psy13856 167 RKVIIWTSNDYVTWTPFIMNTFD--------DVVWNVSWS-LTG---DILTVSCGDNSVSLWKENTDG 222 (271)
Q Consensus 167 g~i~iwd~~~~~~~~~~~~~~h~--------~~v~~v~~~-~~g---~~l~s~s~D~~v~iw~~~~~~ 222 (271)
+.|..+|.++++..=......|. .++. +... .+| ..++.++.+|.++++|..++.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCC
Confidence 47899999988741122222332 1222 2222 467 567778899999999998873
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.65 E-value=48 Score=29.27 Aligned_cols=77 Identities=3% Similarity=-0.136 Sum_probs=47.0
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCC
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 220 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~ 220 (271)
-.....|++++. .+.+..+-...+.|...|+..... ..+.........+++.. +.++.+-...+.|...|..+
T Consensus 165 ~~~P~GlalD~~---~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 165 VGRANGLTIDYA---KRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp CSSEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred CCCcceEEEccc---cCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 355678999984 345555555678899999865442 22333333456777754 34444444577888888666
Q ss_pred CCce
Q psy13856 221 DGAW 224 (271)
Q Consensus 221 ~~~~ 224 (271)
+...
T Consensus 238 g~~~ 241 (628)
T 4a0p_A 238 GQNR 241 (628)
T ss_dssp CCSC
T ss_pred CCce
Confidence 5443
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.84 E-value=7.3 Score=36.37 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=30.4
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
+.+++..++..++++-+.|+++|+|++ .+++|+...
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl---~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDL---STNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEET---TTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEEC---CCCCeEeee
Confidence 567777888889999999999999999 788877653
No 327
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.66 E-value=5.8 Score=37.84 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=29.9
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
+.+++..++..++++-+.|+++|+|++ .++.|+...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl---~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDL---STNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEET---TTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEEC---CCCCeEEee
Confidence 456667778889999999999999999 888887654
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=68.20 E-value=53 Score=27.57 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=35.0
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc------CCCCeEEEEEecC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------FDDVVWNVSWSLT 200 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------h~~~v~~v~~~~~ 200 (271)
...++|+|.| +++++++-...+.|++++..++.......+.. ....+..|+|+|+
T Consensus 27 ~~P~~~a~~p----dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGP----DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECT----TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcC----CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4567999999 68877776544578888765444211222211 2456789999995
No 329
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=68.20 E-value=47 Score=26.97 Aligned_cols=161 Identities=8% Similarity=-0.005 Sum_probs=87.6
Q ss_pred CCCCEEEEccCCCeEEeccc----eeeeccccccccccceEEEEcC----CCCe--EEEEe--C--CCcEEEEEeecCCC
Q psy13856 33 RIGHTLISCDTQAHIGIRST----ISLLQGSVYLRRESNKAGALSP----KLNR--SATSS--F--HEAAKHLGTVQSSS 98 (271)
Q Consensus 33 ~~g~~l~s~s~d~~i~lwd~----~~~~~~h~~~~~~~i~~~~~s~----~~~~--l~s~s--~--d~~i~~~d~~~~~~ 98 (271)
|...+++....++-+.+||+ ++.+.. +. +..+..-| .|+. ++.++ . +.+|.+|++.. .+
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~----~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp-~~ 110 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYNT--GK----LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG-KN 110 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEECC--SC----EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT-TT
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEccC--CC----cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC-CC
Confidence 45566777777789999999 444432 33 55555554 2222 23332 3 57888897620 11
Q ss_pred CceeeccceeeEEEeeccceeeeEEEEeeCCceEEeEEecCCCcceEEEEE--ccCCCCCCc-EEEEEeCCCeEEEEEcC
Q psy13856 99 PACLQPKYFKLTVYSTKLTRILILVRICGGDKWIEETKLENHSDWVRDVAW--APSWGLSKC-MIASCSQDRKVIIWTSN 175 (271)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~v~i~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~~-~l~s~~~dg~i~iwd~~ 175 (271)
+. +... + .....+..--..+..+++ +|. ++. +++....+|.+..|++.
T Consensus 111 ~~-l~~i-----------------------~--~~~~pv~t~~~~pyGlcly~~~~---~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 111 GT-LQSM-----------------------T--DPDHPIATAINEVYGFTLYHSQK---TGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp CC-EEEC-----------------------S--CTTSCEECCCSSCCCEEEEECTT---TCCEEEEEECSSSEEEEEEEE
T ss_pred Cc-eeec-----------------------c--ccccCcCCCCCCeeEEEEEecCC---CCcEEEEEECCCCeEEEEEEE
Confidence 11 1100 0 000000011145566777 674 343 67788889999999984
Q ss_pred C---Cce--eeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCCC--ceeEEEEe
Q psy13856 176 D---YVT--WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG--AWQCITEM 230 (271)
Q Consensus 176 ~---~~~--~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~--~~~~~~~~ 230 (271)
. +.. ..+..+. ..+.+-.+...+....|+.+-+|.-|..++.+... ....+..+
T Consensus 162 ~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 162 ADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp ECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred eCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 3 211 1122332 34567788888888899999998665444533222 23455544
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=67.40 E-value=90 Score=29.93 Aligned_cols=162 Identities=9% Similarity=-0.018 Sum_probs=85.5
Q ss_pred CCCeEEeccc------eee--eccccccccccceEEEEc---CCCCeEEEEeCCCcEEEEEeecCCCCceeeccce----
Q psy13856 43 TQAHIGIRST------ISL--LQGSVYLRRESNKAGALS---PKLNRSATSSFHEAAKHLGTVQSSSPACLQPKYF---- 107 (271)
Q Consensus 43 ~d~~i~lwd~------~~~--~~~h~~~~~~~i~~~~~s---~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~~~---- 107 (271)
.+|.+++... ... +.+ ... ++.+... ....+|+.+..+.+. ++.+.. ++...+....+
T Consensus 401 ~~gsL~~lr~Gi~~~~~~~~~l~g-v~~----iWtl~~~~~~~~~~yLvlS~~~~T~-Vl~i~~-e~veev~~~gf~~~~ 473 (1158)
T 3ei3_A 401 KEGSLRIIRNGIGIHEHASIDLPG-IKG----LWPLRSDPNRETDDTLVLSFVGQTR-VLMLNG-EEVEETELMGFVDDQ 473 (1158)
T ss_dssp GGCEEEEEEESBCEEEEEEECCCS-CCE----EEEECCCSSCSSCCEEEEEETTEEE-EEEEET-TEEEEECCTTCCSSS
T ss_pred CCCeEEEEecCCCEEEEEeecCCC-ccE----EEEEeecCCCCCCCEEEEECCCCeE-EEEEeC-CcccccccccccCCC
Confidence 5688888765 111 111 122 5666543 234577777777775 666521 11111111111
Q ss_pred -eeEEEeeccceee----eEEEE-eeCCceEEeEEecC-CCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCcee
Q psy13856 108 -KLTVYSTKLTRIL----ILVRI-CGGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW 180 (271)
Q Consensus 108 -~~~~~~~~~~~l~----~~v~i-~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 180 (271)
+..+.......++ ..|++ ..... ..+..... ....|...+.+. .+++.++ .+.+..+.+..+...
T Consensus 474 ~TL~~~~l~~~~ivQVt~~~Irli~~~~~-~~~~~w~~p~~~~I~~As~n~------~~vvva~-g~~l~~fel~~~~L~ 545 (1158)
T 3ei3_A 474 QTFFCGNVAHQQLIQITSASVRLVSQEPK-ALVSEWKEPQAKNISVASCNS------SQVVVAV-GRALYYLQIHPQELR 545 (1158)
T ss_dssp CEEEEEEETTTEEEEEESSCEEEEESSSC-CEEEEECCTTCCCCCEEEECS------SEEEEEE-TTEEEEEEEETTEEE
T ss_pred CcEEEEEcCCCeEEEEecCEEEEEECCCC-eEEEEEECCCCCEEEEEEeCC------CEEEEEE-CCEEEEEEeeCCcee
Confidence 2222222233343 44555 22111 23334432 234566666554 3454444 577888877654321
Q ss_pred eeeeeccCCCCeEEEEEecC------CCEEEEEEC-CCcEEEEEeCC
Q psy13856 181 TPFIMNTFDDVVWNVSWSLT------GDILTVSCG-DNSVSLWKENT 220 (271)
Q Consensus 181 ~~~~~~~h~~~v~~v~~~~~------g~~l~s~s~-D~~v~iw~~~~ 220 (271)
...-......|.|+++.|. +.+++.|.. |++|+|+.+..
T Consensus 546 -~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 546 -QISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp -EEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred -eecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 1111234568999999863 479999997 99999999974
No 331
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.06 E-value=19 Score=34.35 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=30.9
Q ss_pred CeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 191 VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 191 ~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
.+.+++..++..++++-+.|+++|||++.++ .++.+..-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~---~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN---QCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT---EEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC---CeEEeech
Confidence 4455666678899999999999999999987 67666543
No 332
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.21 E-value=50 Score=29.73 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=28.0
Q ss_pred CeEEEEEecCCCEEEEEECCCcEEEEEeCCCCceeEEEEecc
Q psy13856 191 VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK 232 (271)
Q Consensus 191 ~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 232 (271)
.|.++. .+..++++-+.|.++|+|+++++ +++.+..-
T Consensus 223 ~Is~~~--~~~~fLftL~~Dh~LRiWsL~t~---~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKL--FHERYLIVLTQNCHLKIWDLTSF---TLIQDYDM 259 (729)
T ss_dssp EEEEEE--ETTTEEEEEETTCEEEEEETTTT---EEEEEEET
T ss_pred eEEEec--cCCcEEEEEEcCCeEEEEEcCCC---ceEEeecc
Confidence 344443 35789999999999999999987 66665544
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=64.03 E-value=55 Score=26.29 Aligned_cols=73 Identities=5% Similarity=-0.078 Sum_probs=43.8
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee---ccCCCCeEEEEEecC----CCEEEEEEC---C
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLT----GDILTVSCG---D 210 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~v~~~~~----g~~l~s~s~---D 210 (271)
-...+.++|.| +++++++ ..++.|++++. ++. .....+ .........++++|+ +.+.++-+. +
T Consensus 28 l~~P~~ia~~p----dG~l~V~-e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 28 LEVPWSIAPLG----GGRYLVT-ERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp CSCEEEEEEEE----TTEEEEE-ETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCCeEEEEcC----CCeEEEE-eCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 34567899999 6775555 55699998873 333 112211 112346889999997 444444332 3
Q ss_pred ----CcEEEEEeCC
Q psy13856 211 ----NSVSLWKENT 220 (271)
Q Consensus 211 ----~~v~iw~~~~ 220 (271)
+.|..|+...
T Consensus 101 ~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 101 GHIRNRVIRGRLDG 114 (354)
T ss_dssp GCEEEEEEEEEECS
T ss_pred CCcceEEEEEEECC
Confidence 5677777653
No 334
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=59.62 E-value=22 Score=31.90 Aligned_cols=34 Identities=9% Similarity=-0.147 Sum_probs=26.4
Q ss_pred ceEEEEcCCCCeEEEEeCCCcEEEEEeecCCCCceeecc
Q psy13856 67 NKAGALSPKLNRSATSSFHEAAKHLGTVQSSSPACLQPK 105 (271)
Q Consensus 67 i~~~~~s~~~~~l~s~s~d~~i~~~d~~~~~~~~~~~~~ 105 (271)
|.++.+ +..++++-+.|.++|+|++ ++++++...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL---~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDL---TSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEET---TTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEc---CCCceEEee
Confidence 444444 4679999999999999999 788777654
No 335
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=58.88 E-value=68 Score=25.66 Aligned_cols=72 Identities=8% Similarity=0.027 Sum_probs=44.1
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee---ccCCCCeEEEEEecC---CCEEEEE-ECC----
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLT---GDILTVS-CGD---- 210 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~v~~~~~---g~~l~s~-s~D---- 210 (271)
..-+.++|.| +++++++ ..++.|++++ .+.......+ .........++|+|+ +..|..+ ..+
T Consensus 31 ~~P~~ia~~p----dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLP----DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECT----TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcC----CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 4467899999 6886655 4569999998 3332111111 112346789999998 4444443 322
Q ss_pred -CcEEEEEeCC
Q psy13856 211 -NSVSLWKENT 220 (271)
Q Consensus 211 -~~v~iw~~~~ 220 (271)
+.|..|+...
T Consensus 104 ~~~v~r~~~~~ 114 (352)
T 2ism_A 104 RNQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEEECS
T ss_pred ccEEEEEEeCC
Confidence 5677777763
No 336
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=57.18 E-value=1e+02 Score=27.10 Aligned_cols=74 Identities=8% Similarity=-0.038 Sum_probs=40.5
Q ss_pred cceEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEEC-CCcEEEEEeC
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKEN 219 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-D~~v~iw~~~ 219 (271)
....+|+++|. .|.++.+-. ....|...++..... .......-...+.+++++++..|..+.. .+.|..++++
T Consensus 435 ~~P~~iavdp~---~G~ly~tD~g~~~~I~r~~~dG~~~--~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 435 EEPRAIVLDPM---VGYMYWTDWGEIPKIERAALDGSDR--VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp CSEEEEEEETT---TTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred CCeeeEEEEcC---CCcEEEecCCCCCEEEEEccCCCcc--EEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 45667888874 355544432 235666666543321 2222223345677888876555555543 4567777765
Q ss_pred C
Q psy13856 220 T 220 (271)
Q Consensus 220 ~ 220 (271)
.
T Consensus 510 G 510 (619)
T 3s94_A 510 G 510 (619)
T ss_dssp S
T ss_pred C
Confidence 3
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=54.05 E-value=61 Score=28.42 Aligned_cols=72 Identities=7% Similarity=-0.012 Sum_probs=48.4
Q ss_pred eEEEEEccCCCCCCcEEEEEe-CCCeEEEEEcCCCc-----------eeeeeeeccCCCCeEEEEEecCCCEEEEEECCC
Q psy13856 144 VRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYV-----------TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN 211 (271)
Q Consensus 144 v~~v~~~p~~~~~~~~l~s~~-~dg~i~iwd~~~~~-----------~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~ 211 (271)
...+..+| ||.+++.++ -+.++.++|.++.. .. +.....-.......+|.++|....+---|.
T Consensus 325 PHGv~vsP----DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~-~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 325 PHGCNTSS----DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDV-IVGEPELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp CCCEEECT----TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGG-EEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred CcceeeCC----CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccc-eEeeccCCCcccEEEECCCCceEeeeeecc
Confidence 34678888 788876655 48899999998421 10 111111234567889999995555555799
Q ss_pred cEEEEEeCC
Q psy13856 212 SVSLWKENT 220 (271)
Q Consensus 212 ~v~iw~~~~ 220 (271)
+|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999963
No 338
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.89 E-value=1.2e+02 Score=27.66 Aligned_cols=84 Identities=10% Similarity=0.150 Sum_probs=50.5
Q ss_pred CcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc-----CCCCeEEEEEecC-CCEEEEEECCCc--
Q psy13856 141 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-----FDDVVWNVSWSLT-GDILTVSCGDNS-- 212 (271)
Q Consensus 141 ~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----h~~~v~~v~~~~~-g~~l~s~s~D~~-- 212 (271)
...|.+|+++|. +...+..+...+.|...+ ..+..|....... ....+.+++++|. ...+..+..+..
T Consensus 14 ~g~i~~i~~~p~---~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~ 89 (789)
T 1sqj_A 14 GGYITGIVAHPK---TKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD 89 (789)
T ss_dssp CSCEEEEEECSS---STTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred CCcEEEEEECCC---CCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC
Confidence 468999999996 567777777777665544 4456663321111 1246999999984 344444443322
Q ss_pred --EEEEEeCCC-CceeEEE
Q psy13856 213 --VSLWKENTD-GAWQCIT 228 (271)
Q Consensus 213 --v~iw~~~~~-~~~~~~~ 228 (271)
-.||.-..+ ..|+.+.
T Consensus 90 ~~~~v~~S~DgG~TW~~~~ 108 (789)
T 1sqj_A 90 EWAAFYVSEDRGQSFTIYE 108 (789)
T ss_dssp SCCEEEEESSTTSEEEEEE
T ss_pred cccEEEEECCCCCcceecc
Confidence 445655444 4687764
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.29 E-value=95 Score=25.05 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=39.9
Q ss_pred cceEEEEEccCCCCC-CcEEEEEeCCCeEEEEEcCCCceeeeee-ecc----------------CCCCeEEEEEecC-CC
Q psy13856 142 DWVRDVAWAPSWGLS-KCMIASCSQDRKVIIWTSNDYVTWTPFI-MNT----------------FDDVVWNVSWSLT-GD 202 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~----------------h~~~v~~v~~~~~-g~ 202 (271)
..|.++++.|. + ...+..+...+.|...+ ..+..|.... ... ....+.++.++|. ..
T Consensus 115 ~~i~~l~~~~~---~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~ 190 (394)
T 3b7f_A 115 DHVFWLTPGHA---SEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPK 190 (394)
T ss_dssp CEEEEEEECCT---TSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTT
T ss_pred cceeEEEeCCC---CCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCC
Confidence 35778888874 3 44555555556554432 3334442221 100 1235788999873 34
Q ss_pred EEEEEECCCcEEEEEeCC-CCceeEE
Q psy13856 203 ILTVSCGDNSVSLWKENT-DGAWQCI 227 (271)
Q Consensus 203 ~l~s~s~D~~v~iw~~~~-~~~~~~~ 227 (271)
.|..+..++.| |.... +..|+.+
T Consensus 191 ~l~vg~~~ggl--~~s~DgG~tW~~~ 214 (394)
T 3b7f_A 191 HLYIGMSSGGV--FESTDAGTDWKPL 214 (394)
T ss_dssp CEEEEEETBEE--EEESSTTSSCEEC
T ss_pred EEEEEECCCCE--EEECCCCCCceEC
Confidence 44444444434 33333 3456554
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=50.13 E-value=82 Score=25.22 Aligned_cols=73 Identities=11% Similarity=0.083 Sum_probs=41.4
Q ss_pred cceEEEEEccCCCCCCc-EEEEEeCCCeEEEEEcCCCcee-eee----eeccCCCCeEEEEEecC----CCEEEEEEC--
Q psy13856 142 DWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTW-TPF----IMNTFDDVVWNVSWSLT----GDILTVSCG-- 209 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~-~~~----~~~~h~~~v~~v~~~~~----g~~l~s~s~-- 209 (271)
...+.|+|.| +++ +++ +...|.|++++... ... ... ...........++|+|+ +.+.++-+.
T Consensus 18 ~~P~~i~~~p----dG~~l~V-~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~ 91 (353)
T 2g8s_A 18 DHPWALAFLP----DNHGMLI-TLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG 91 (353)
T ss_dssp SSEEEEEECS----TTCCEEE-EETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEEC
T ss_pred CCcEEEEEcC----CCCEEEE-EeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCC
Confidence 3467899999 688 554 45679999998532 210 011 11112346789999995 444444332
Q ss_pred -----CCcEEEEEeCC
Q psy13856 210 -----DNSVSLWKENT 220 (271)
Q Consensus 210 -----D~~v~iw~~~~ 220 (271)
...|..|++..
T Consensus 92 ~~g~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSD 107 (353)
T ss_dssp SSSCEEEEEEEEEECT
T ss_pred CCCCceeEEEEEEECC
Confidence 22465666543
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=50.04 E-value=1.8e+02 Score=27.89 Aligned_cols=78 Identities=12% Similarity=0.024 Sum_probs=51.5
Q ss_pred CcceEEEEEccCC--CCCCcEEEEEeC-CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEec--CCCEEEEEECCCcEEE
Q psy13856 141 SDWVRDVAWAPSW--GLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL--TGDILTVSCGDNSVSL 215 (271)
Q Consensus 141 ~~~v~~v~~~p~~--~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~--~g~~l~s~s~D~~v~i 215 (271)
...|.|+++.|.. .....+++.|.. |++++|+++...+......+.. .....++.+.. ...+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 4679999998631 002478999996 9999999998755432222221 22344554432 3468889999999877
Q ss_pred EEeC
Q psy13856 216 WKEN 219 (271)
Q Consensus 216 w~~~ 219 (271)
+.++
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7775
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=43.56 E-value=1.3e+02 Score=24.27 Aligned_cols=82 Identities=7% Similarity=-0.047 Sum_probs=49.3
Q ss_pred EEecCCCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeee----ccCCCCeEEEEEecC----CCEEEE
Q psy13856 135 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM----NTFDDVVWNVSWSLT----GDILTV 206 (271)
Q Consensus 135 ~~~~~h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~h~~~v~~v~~~~~----g~~l~s 206 (271)
..+...-..-+.|+|.| ++.++++--..|.|++++...+.......+ .........++++|+ +.+.++
T Consensus 25 ~~va~gL~~P~~ia~~p----dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP----GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEECCCSSEEEEEECT----TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred EEeecCCCCceEEEEcC----CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 33333345668999999 688877776689999988655442112111 123457889999995 444333
Q ss_pred EE--CCCcEEEEEeCC
Q psy13856 207 SC--GDNSVSLWKENT 220 (271)
Q Consensus 207 ~s--~D~~v~iw~~~~ 220 (271)
-+ .++.|.-|.+..
T Consensus 101 yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 101 FTSASDNRIVRMLYDE 116 (347)
T ss_dssp EECSSSEEEEEEEBCT
T ss_pred EecCCCCEEEEEEeCC
Confidence 22 344555555543
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=39.87 E-value=1.3e+02 Score=26.35 Aligned_cols=57 Identities=12% Similarity=0.015 Sum_probs=35.2
Q ss_pred EEEEEccCCCCCCcEEEEEeCC------------CeEEEEEcCCCceeeeeeeccC-CCCeEEEEEecCCCEEEEE
Q psy13856 145 RDVAWAPSWGLSKCMIASCSQD------------RKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVS 207 (271)
Q Consensus 145 ~~v~~~p~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~h-~~~v~~v~~~~~g~~l~s~ 207 (271)
=.|.|+| .|.+++.-..+ ..+.+.+..+++. ...+.+. ...++.++|+||++.|+..
T Consensus 479 DNL~fd~----~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~--~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDK----AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI--RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECT----TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE--EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECC----CCCEEEEecCCCcccccccccccceEEEEeCCCCeE--EEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4588999 57766554322 2344555555553 3333333 4689999999998877665
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=32.88 E-value=1.8e+02 Score=22.83 Aligned_cols=20 Identities=15% Similarity=0.235 Sum_probs=14.9
Q ss_pred CcEEEEEeCCCCceeEEEEec
Q psy13856 211 NSVSLWKENTDGAWQCITEMG 231 (271)
Q Consensus 211 ~~v~iw~~~~~~~~~~~~~~~ 231 (271)
..+.+||+.+ ..|..+..+.
T Consensus 168 ~~v~~yd~~~-~~W~~~~~~p 187 (357)
T 2uvk_A 168 KFLLSFDPST-QQWSYAGESP 187 (357)
T ss_dssp CEEEEEETTT-TEEEEEEECS
T ss_pred ccEEEEeCCC-CcEEECCCCC
Confidence 4788899875 4888887654
No 345
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.95 E-value=2.8e+02 Score=24.83 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=42.5
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCC-------CeEEEEEc-CCCceeeeeeeccC-------CCCeEEEEEecC-CCEEE
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQD-------RKVIIWTS-NDYVTWTPFIMNTF-------DDVVWNVSWSLT-GDILT 205 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~d-------g~i~iwd~-~~~~~~~~~~~~~h-------~~~v~~v~~~~~-g~~l~ 205 (271)
..|.+|+++|. +...+..+... +...||.. ..++.|........ ...+.+++++|. ...+.
T Consensus 72 ~~i~~i~~dp~---~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~ 148 (737)
T 2cn3_A 72 YGVESIATDPV---DPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILY 148 (737)
T ss_dssp GCEEEEEECSS---STTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEE
T ss_pred CCcceEEeCCC---CCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEE
Confidence 45889999985 44444333311 12344444 44555533322111 012467889885 45666
Q ss_pred EEECCCcEEEEEeCCC-CceeEEEE
Q psy13856 206 VSCGDNSVSLWKENTD-GAWQCITE 229 (271)
Q Consensus 206 s~s~D~~v~iw~~~~~-~~~~~~~~ 229 (271)
.+...+ --||.-..+ ..|+.+..
T Consensus 149 ~g~~~g-~gl~~S~DgG~tW~~~~~ 172 (737)
T 2cn3_A 149 LGTRCG-NGLWRSTDYGVTWSKVES 172 (737)
T ss_dssp EECSTT-CCEEEESSTTSSCEECTT
T ss_pred EeeccC-CcEEEeCCCCcceecccC
Confidence 665332 135655444 46876543
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=31.74 E-value=1.8e+02 Score=22.63 Aligned_cols=62 Identities=5% Similarity=-0.045 Sum_probs=31.9
Q ss_pred EEccCCCCCCcEEEEEeC-CCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeC
Q psy13856 148 AWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 219 (271)
Q Consensus 148 ~~~p~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~ 219 (271)
.++| ++..|.-.+. ...|.+-++..... ..+.. +... ..+.|++.+|+-...++.-+|+...
T Consensus 151 ~~~~----~g~~iy~t~~g~~~Iy~~~l~g~~~---~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ 213 (302)
T 3s25_A 151 TCNT----SDRYFYYNNPKNGQLYRYDTASQSE---ALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVN 213 (302)
T ss_dssp CSEE----ETTEEEEECTTTCCEEEEETTTTEE---EEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred EeeE----ECCEEEEEeCCCceEEEEECCCCCE---EEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEE
Confidence 4556 4555554443 56777777665442 22221 2222 2356888877766544323444443
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.20 E-value=2.4e+02 Score=22.56 Aligned_cols=65 Identities=5% Similarity=-0.055 Sum_probs=35.5
Q ss_pred CcEEEEE-eCCCeEEEEEcCCCceeeeeeecc--CCCCeEE----EEEe----cCCCEEEEEECCCcEEEEEeCCC
Q psy13856 157 KCMIASC-SQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWN----VSWS----LTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 157 ~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~----v~~~----~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
+..++.. ..||.+..++..++...-...... ..+++.. +... ..+..+++|+.++.+.-.|+.++
T Consensus 56 ~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 56 YETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp SEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred CcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC
Confidence 3444443 578999999887764210111111 1122221 0000 03457788888999999998887
No 348
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.43 E-value=3.5e+02 Score=24.19 Aligned_cols=82 Identities=12% Similarity=0.237 Sum_probs=48.5
Q ss_pred cceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeec--c----CCCCeEEEEEecC-CCEEEEEECC----
Q psy13856 142 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--T----FDDVVWNVSWSLT-GDILTVSCGD---- 210 (271)
Q Consensus 142 ~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~----h~~~v~~v~~~~~-g~~l~s~s~D---- 210 (271)
+.|..|+++|. +...+..+...+.|...+ ..+..|.. ... + ....+.+|+++|. ...++.+...
T Consensus 23 g~i~~i~~~p~---~~~~~~~~~~~ggv~rS~-D~G~tW~~-i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~ 97 (737)
T 2cn3_A 23 GFMPGIVFNET---EKDLIYARAAIGGAYRWD-PSTETWIP-LLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND 97 (737)
T ss_dssp SCCCEEEECSS---STTCEEEECSSSCEEEEE-TTTTEEEE-CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS
T ss_pred ceeeEEEECCC---CCCEEEEEecCCcEEEeC-CCCCCEEE-CcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc
Confidence 37999999996 556676677666665554 34455532 211 1 1246899999983 3344444321
Q ss_pred ---CcEEEEEeCCC-CceeEEE
Q psy13856 211 ---NSVSLWKENTD-GAWQCIT 228 (271)
Q Consensus 211 ---~~v~iw~~~~~-~~~~~~~ 228 (271)
+...||.-..+ ..|+.+.
T Consensus 98 ~~~~~~~l~~S~DgG~TW~~~~ 119 (737)
T 2cn3_A 98 WLPNMGAILRSTDRGETWEKTI 119 (737)
T ss_dssp SSCCCCEEEEESSSSSSCEEEE
T ss_pred cccCCccEEEeCCCCCCcccCC
Confidence 13567766554 4688765
No 349
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=26.07 E-value=2.2e+02 Score=24.27 Aligned_cols=59 Identities=10% Similarity=-0.094 Sum_probs=37.0
Q ss_pred CcEEEEEeCCCeEEEEEcCCCc------eeeeeeec--cCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy13856 157 KCMIASCSQDRKVIIWTSNDYV------TWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSL 215 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~v~i 215 (271)
...+..|..+|.|.-.-..... ......+. ....+|..+.++++..+|..++.++.++|
T Consensus 421 ~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 421 YDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4467788889987644432211 10011222 23578999999999999999998775544
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=25.11 E-value=1.4e+02 Score=23.97 Aligned_cols=63 Identities=8% Similarity=0.099 Sum_probs=35.9
Q ss_pred CcEEEEEeCCCeEEEEEcCCCceeeeeeeccC-CCCeEEEEEe--c-CCCEEEEE-ECCCcEEEEEeCCC
Q psy13856 157 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWS--L-TGDILTVS-CGDNSVSLWKENTD 221 (271)
Q Consensus 157 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~v~~~--~-~g~~l~s~-s~D~~v~iw~~~~~ 221 (271)
+..++.++.||.|.-.|..+++. .-.+..- ..++....-. + ++..++.. +.||.|+.++..++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~--~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHI--IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEE--EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCcE--EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 45788889999999999988764 2222221 1122111100 1 22333333 57888888887654
No 351
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.71 E-value=1.8e+02 Score=25.04 Aligned_cols=71 Identities=8% Similarity=-0.002 Sum_probs=43.0
Q ss_pred ceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCc----eeeeeeeccCCCCeE-EEEEecCCCEEEEEECCCcEEE
Q psy13856 143 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV----TWTPFIMNTFDDVVW-NVSWSLTGDILTVSCGDNSVSL 215 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~h~~~v~-~v~~~~~g~~l~s~s~D~~v~i 215 (271)
..++|+..... +...+..|..+|.|.-..+.... .+....+.....+|. .+.+++++.+|..++.++.++|
T Consensus 401 ~lT~vav~~~~--~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYN--GYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEET--TEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccC--CeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 34555555421 35677889999988765554221 111112223346785 8999999999999987654444
No 352
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=24.55 E-value=3.9e+02 Score=24.05 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=49.9
Q ss_pred CCcceEEEEEccCCCCCCcEEEEEeCCCeEEEEEcCCCceeeeeeecc----------CCCCeEEEEEecC-CCEEEEEE
Q psy13856 140 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT----------FDDVVWNVSWSLT-GDILTVSC 208 (271)
Q Consensus 140 h~~~v~~v~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------h~~~v~~v~~~~~-g~~l~s~s 208 (271)
-.+.|.+|.++|. +...+..+...|.|...+ ..++.|....... ....+.+++++|. ...+..+.
T Consensus 19 ~~g~i~~i~~~p~---~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~ 94 (763)
T 3a0f_A 19 GGGFISGLVAHPT---EKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQ 94 (763)
T ss_dssp BCSCEEEEEECSS---STTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEE
T ss_pred CCCceeEEEeCCC---CCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEe
Confidence 4568999999997 667777777666654433 3455553322211 1245889999883 34444433
Q ss_pred CC-----CcEEEEEeCC-CCceeEEE
Q psy13856 209 GD-----NSVSLWKENT-DGAWQCIT 228 (271)
Q Consensus 209 ~D-----~~v~iw~~~~-~~~~~~~~ 228 (271)
.+ ....||.-.. +..|+.+.
T Consensus 95 g~~~~~~~~~~i~~S~DgG~TW~~~~ 120 (763)
T 3a0f_A 95 GDYVQWDPWAAFLVSDDRGKTFKQYR 120 (763)
T ss_dssp CSCTTTCSCCEEEEESSTTSSCEEEE
T ss_pred cccccCCCCceEEEECCCCCCceecc
Confidence 21 1245666554 44688876
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=23.14 E-value=3e+02 Score=22.31 Aligned_cols=176 Identities=5% Similarity=-0.083 Sum_probs=92.3
Q ss_pred CEEEEccCCCeEEeccc------eeeeccccccccccceEEEEcCCCCeEEEEe-------CCCcEEEEEeecCCCCcee
Q psy13856 36 HTLISCDTQAHIGIRST------ISLLQGSVYLRRESNKAGALSPKLNRSATSS-------FHEAAKHLGTVQSSSPACL 102 (271)
Q Consensus 36 ~~l~s~s~d~~i~lwd~------~~~~~~h~~~~~~~i~~~~~s~~~~~l~s~s-------~d~~i~~~d~~~~~~~~~~ 102 (271)
+.|+-... ..|.-|++ .+.+..|.......|..-+.+++.++++..+ -.|.+++|.. +.+...
T Consensus 118 ~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~---er~~sQ 193 (365)
T 2xzh_A 118 NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV---DRKVSQ 193 (365)
T ss_dssp SEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET---TTTEEE
T ss_pred CeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEee---cccccc
Confidence 33333333 55666765 5556666665455566777788888765543 2366777775 333333
Q ss_pred eccceeeEEEe--ec-----cceee--------eEEEE-ee--C--C--ce--EEeEEecC---CCcceEEEEEccCCCC
Q psy13856 103 QPKYFKLTVYS--TK-----LTRIL--------ILVRI-CG--G--D--KW--IEETKLEN---HSDWVRDVAWAPSWGL 155 (271)
Q Consensus 103 ~~~~~~~~~~~--~~-----~~~l~--------~~v~i-~~--~--~--~~--~~~~~~~~---h~~~v~~v~~~p~~~~ 155 (271)
...++...-.. .+ ...++ +.+++ .- . + .+ +.+..+.. ..+--.++..++.
T Consensus 194 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k--- 270 (365)
T 2xzh_A 194 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK--- 270 (365)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT---
T ss_pred eeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc---
Confidence 22233222111 11 11222 34444 11 1 1 11 11111111 1233456777774
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCceeeeeeeccCCCCeEEEEEecCCCEEEEEECCCcEEEEEeCCC
Q psy13856 156 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 221 (271)
Q Consensus 156 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw~~~~~ 221 (271)
...+..-..-|.+.+||++++.+. ..-.--.+.|..-+-+.+..-++.....|.|.--.++..
T Consensus 271 -ygviyviTK~G~ihlyDleTgt~i--~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 271 -HDVVFLITKYGYIHLYDLETGTCI--YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp -TTEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred -CCEEEEEeCCcEEEEEEcccCcEE--EEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 677888888999999999999873 332223445555555444444555556777766666544
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.30 E-value=4.2e+02 Score=23.23 Aligned_cols=60 Identities=10% Similarity=0.008 Sum_probs=37.0
Q ss_pred ceEEEEEccCCCCCCcEEE-EEeC-----------CCeEEEEEcCCCceeeeeeecc-CCCCeEEEEEecCCCEEEEEE
Q psy13856 143 WVRDVAWAPSWGLSKCMIA-SCSQ-----------DRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSC 208 (271)
Q Consensus 143 ~v~~v~~~p~~~~~~~~l~-s~~~-----------dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~s 208 (271)
....|.|++ +|.+.+ +=.. ...+..++..+++. ...+.. ....++.++|+||++.|+.+-
T Consensus 477 sPDnL~fd~----~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel--~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK----AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI--RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT----TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE--EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC----CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE--EEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345789998 566666 3221 12466666655653 233332 235789999999998877663
No 355
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.94 E-value=4.2e+02 Score=23.60 Aligned_cols=58 Identities=7% Similarity=-0.078 Sum_probs=36.1
Q ss_pred cEEEEEeCCCeEE-EEEcCCCc-----eeeeee--eccCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy13856 158 CMIASCSQDRKVI-IWTSNDYV-----TWTPFI--MNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 215 (271)
Q Consensus 158 ~~l~s~~~dg~i~-iwd~~~~~-----~~~~~~--~~~h~~~v~~v~~~~~g~~l~s~s~D~~v~i 215 (271)
..+..|..+|.|. +....... ...+.. ......+|..+.++++..+|..++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4577788899875 33222211 100111 2234568999999999999999998775544
No 356
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.41 E-value=4.3e+02 Score=23.13 Aligned_cols=59 Identities=7% Similarity=-0.062 Sum_probs=37.8
Q ss_pred cEEEEEeCCCeEEEEEcCCCc----eeeeeeec--cCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy13856 158 CMIASCSQDRKVIIWTSNDYV----TWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLW 216 (271)
Q Consensus 158 ~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~v~iw 216 (271)
..+..|..+|.|.-.-..... ......+. ....+|..+.++++...|..++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 467788889987744333211 11122222 345688999999999999998877655553
Done!