Your job contains 1 sequence.
>psy13857
MFFGKSRGPIGVFKITKESRTIWCRRVLIFTDTTTPGPSVNASDPNSSDPPKPALYYQML
TLLTSDPVMLGSLSMNHTIVNIQVQNIWGVVNTPILKFYHIYKRKEDHNRLSELKHLLSH
KGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTP
EEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADN
LNFGLVQVVYEWAMQKPHW
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13857
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 306 6.5e-26 1
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 289 4.0e-25 2
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 280 1.6e-24 1
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 283 2.8e-24 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 291 2.9e-24 1
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 283 1.1e-23 1
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 283 1.5e-23 1
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 283 1.5e-23 1
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 284 1.5e-23 1
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 283 1.6e-23 1
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 283 1.6e-23 1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 281 3.1e-23 1
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 281 3.2e-23 1
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 280 4.1e-23 1
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 280 4.1e-23 1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 275 1.3e-22 1
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 249 9.5e-20 1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 248 1.2e-19 1
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 239 1.2e-19 2
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 242 4.8e-19 1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 219 1.1e-16 1
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 219 1.1e-16 1
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 204 4.2e-15 1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 204 4.4e-15 1
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 195 4.0e-14 1
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 191 1.3e-13 1
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 183 7.0e-12 1
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 173 2.5e-11 1
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 175 3.0e-11 2
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 174 4.6e-11 2
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 174 4.7e-11 2
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 173 5.0e-11 2
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 173 6.5e-11 2
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 173 6.5e-11 2
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 176 7.5e-11 1
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 171 3.4e-10 1
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 167 1.1e-09 1
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 160 4.5e-09 2
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 159 7.2e-09 2
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 151 1.0e-07 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 142 6.2e-07 2
UNIPROTKB|H9L343 - symbol:H9L343 "Uncharacterized protein... 107 1.1e-05 1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 118 0.00026 2
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 116 0.00091 3
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 306 (112.8 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 71/162 (43%), Positives = 103/162 (63%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
+F +Y+R+ + EL+ S + ++LY DY +K+KVL+ L YI+ V LKG +AC
Sbjct: 976 EFAKVYERRMLEIHIEELRFKNSARNLTLYPDYCNKLKVLRALKYIDELDEVTLKGKVAC 1035
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
EMG +NELLITEL+ N + P EIAALLS LVFQ+K +PE+LK+ ++ +
Sbjct: 1036 EMG-QNELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEALKECVAAFEQI 1094
Query: 217 NIEVESIEKKHGVERDKSSEEADN-LNFGLVQVVYEWAMQKP 257
N + + E +R +++ E DN LNFGL++VVYEWA KP
Sbjct: 1095 NDTILAEE-----QRFQAAIETDNRLNFGLLEVVYEWARNKP 1131
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 289 (106.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 68/175 (38%), Positives = 101/175 (57%)
Query: 87 IWGV--VNTPIL--KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYI 142
IWG V++P ++ + +R + + L+ LLS + + L +Y +V+VL+ L Y+
Sbjct: 1009 IWGAQCVHSPRFSAQYVKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068
Query: 143 NSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTEL 202
+ G V+L G +AC M S +ELL+TEL+F N L PEEIAALLS LV QS +L
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQL 1127
Query: 203 PESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
P +LKQG+ + + + ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1128 PSTLKQGVERVRAVARRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1181
Score = 38 (18.4 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 36 PGPSVNASDPNSSDPPKPALYYQMLTLLTSDPVMLGSLSMNHTIVNIQVQ-NIWGVVNT 93
PG + ++ P+ P P L + L S P L + H++ Q + + W ++ T
Sbjct: 36 PG-APESTLPHGLPPCAPDLQQEAEQLFLSSPAWLPLHGVEHSVRKWQRKMDPWSLLAT 93
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 62/157 (39%), Positives = 93/157 (59%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 22 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 81
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 82 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 140
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+ ++ G+ + E LNFGLV+VVYEWA
Sbjct: 141 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWA 176
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 283 (104.7 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 1023 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 1082
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 1083 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 1141
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1142 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1181
Score = 36 (17.7 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 36 PGPSVNASDPNSSDPPKPALYYQMLTLLTSDPVMLGSLSMNHT 78
PG + +S P+ P P L + L S P L + H+
Sbjct: 36 PG-APESSLPHGLPPCAPDLQQEAEQLFLSSPAWLPLHGVEHS 77
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 291 (107.5 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 61/163 (37%), Positives = 98/163 (60%)
Query: 97 KFYHIYKRKEDH----NRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKG 152
KF ++ + D +S+LK L+S + + L DY+ +++VL++L +++ Q VQLKG
Sbjct: 1063 KFLKHFEMQRDEWQIKENISQLKQLMSDQNLQLLPDYEQRIQVLKDLGFVDEQSRVQLKG 1122
Query: 153 NIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSI 212
+ACE+ S +EL++TEL+ +N L + PEEI ALLS VFQ KT L L++G
Sbjct: 1123 KVACEIHSADELVLTELILENVLAEYEPEEIVALLSAFVFQEKTENVPTLNPRLEKGKEA 1182
Query: 213 IADMNIEVESIEKKHGV--ERDKSSEEADNLNFGLVQVVYEWA 253
I ++ +V ++ +H V + ++ A FGL +VVYEWA
Sbjct: 1183 IIRISEKVNDVQIQHQVLQSTEDINDFASQPRFGLAEVVYEWA 1225
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 283 (104.7 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 657 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 716
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 717 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 775
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 776 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 815
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 830 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 889
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 890 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 948
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 949 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 988
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 283 (104.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 830 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 889
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 890 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 948
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 949 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 988
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 284 (105.0 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 1023 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 1082
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 1083 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVRTV 1141
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1142 AKRIGEVQAACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1181
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 283 (104.7 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 865 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 924
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 925 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 983
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 984 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1023
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 283 (104.7 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 865 QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 924
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 925 AMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAV 983
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 984 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1023
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 281 (104.0 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 983 QYVKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 1042
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 1043 AMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVKAV 1101
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1102 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1141
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 281 (104.0 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 1018 QYVKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 1077
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 1078 AMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVKAV 1136
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1137 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1176
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 280 (103.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 63/161 (39%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
++ + +R + + L+ LLS + + L +Y +V+VL+ L Y++ G V+L G +AC
Sbjct: 1023 QYVKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC 1082
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
M S +ELL+TEL+F N L PEEIAALLS LV QS +LP +LKQG+ + +
Sbjct: 1083 AMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVQAV 1141
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ ++ G+ + E LNFGLV+VVYEWA P
Sbjct: 1142 AKRIGEVQVACGLNQTVE-EFVGELNFGLVEVVYEWARGMP 1181
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 280 (103.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 59/161 (36%), Positives = 94/161 (58%)
Query: 97 KFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
+F + +R L +L L+S + ++L +Y ++KVL+ L Y++S G VQLKG +AC
Sbjct: 1026 QFTRVQERMSVQEELDKLLFLVSDQSLTLLPEYHQRIKVLEALQYVDSSGAVQLKGRVAC 1085
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
++ S +ELL+TELLF+N L PEE AALLSCLVF T + +L++G++ + +
Sbjct: 1086 QISS-HELLLTELLFENTLSPLAPEESAALLSCLVFTQNTQIEPHITNTLQEGINQVLAV 1144
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
+ +++ G+ + A FGL +VVY WA P
Sbjct: 1145 AQRIGDLQRDCGIAQTAEDFVAQ-FKFGLTEVVYCWARGMP 1184
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 58/167 (34%), Positives = 97/167 (58%)
Query: 90 VVNTP--ILKFYHIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGI 147
+++TP + F Y+ E + + L +S + + L DY+ ++KVLQEL YI+++
Sbjct: 979 IISTPNFLTHFALAYQEYELESNIDNLSSYISDQNLELLPDYEQRIKVLQELGYIDAERT 1038
Query: 148 VQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLK 207
V LKG +ACE+ S +EL++TEL+ +N L +F+ EE ALLS VF KT + L+
Sbjct: 1039 VLLKGRVACEINSTSELVLTELILENSLADFSCEETIALLSAFVFDEKTEVEPTISPHLQ 1098
Query: 208 QGMSIIADMNIEVESIEKKHGVERDKSSEEADNL-NFGLVQVVYEWA 253
+G +I + +V I++ + V + ++ FGL++V YEWA
Sbjct: 1099 KGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQPRFGLMEVCYEWA 1145
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 249 (92.7 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 57/158 (36%), Positives = 89/158 (56%)
Query: 103 KRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKN 162
KR + + + K+ S + + L ++ ++ +L EL YI+ + V LKG ++ E+ +
Sbjct: 1159 KRYQLQYAIRDAKYTASDENLKLMPQFNIRLDILHELGYIDDENTVTLKGRVSREINTCE 1218
Query: 163 ELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTT-PTELP--ESLKQGMSIIADMNIE 219
+L+ITEL+F+N +N P E+ ++LSCL+FQ K P+ P E KQ + A+ +
Sbjct: 1219 DLVITELIFENAFINLEPSEVVSVLSCLIFQEKDAVQPSLTPRLEEAKQNLIKTAEKTYK 1278
Query: 220 VESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
VES +K V D E L FGL+QVVYEWA P
Sbjct: 1279 VES-DKGLDVVPDDKLETT--LKFGLMQVVYEWARGTP 1313
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 248 (92.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/157 (33%), Positives = 84/157 (53%)
Query: 101 IYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGS 160
I K K D L +L+ +S + + + ++ VL+ + I+ +VQ+KG +ACEM S
Sbjct: 1127 IKKHKTD---LKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNS 1183
Query: 161 KNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADMNIEV 220
EL+ T LF+N+ PEE A++S VFQ K T+ L L + + D I +
Sbjct: 1184 GEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRL 1243
Query: 221 ESIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQKP 257
++ ++ ++ D +NL FGLV+VVYEWA P
Sbjct: 1244 GELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTP 1280
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 59/150 (39%), Positives = 90/150 (60%)
Query: 111 LSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNELLITELL 170
+ +L+ L+S + + L DY+ +++VL+ + YI+ Q V LKG +ACE+ S EL+ITEL+
Sbjct: 1032 VEKLERLISDENLELLPDYEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELIITELV 1091
Query: 171 FQNKLVNFTPEEIAALLSCLVFQSKTTT--PTELPESLKQGMSIIADMNIEVESIEKKHG 228
N L +F P EI ALLSC V++ +T P + L++G + I ++ E + K +
Sbjct: 1092 LNNFLGDFEPAEIVALLSCFVYEGRTQEEEPPLITPRLEKGKAKILEI---AEKLLKVY- 1147
Query: 229 VERDKS--SEEAD---NLNFGLVQVVYEWA 253
VE+ S SEE D + F L VVYEWA
Sbjct: 1148 VEKQVSLTSEEEDFVESKRFALANVVYEWA 1177
Score = 36 (17.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 25 RRVLIFTDTTTPGPSVN 41
RR + TD P P +N
Sbjct: 32 RRQNLKTDLLNPSPEIN 48
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 242 (90.2 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 56/157 (35%), Positives = 88/157 (56%)
Query: 100 HIYKRKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMG 159
H+ K+K + EL HL+S + +SL DY+ ++ VL++ +I+ V LKG +ACE+
Sbjct: 1068 HVIKKK-----IEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEIN 1122
Query: 160 SKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTT--PTELPESLKQGMSIIADMN 217
S EL++TEL+ N L +F PEEI ALLS V++ KT P + L +G I ++
Sbjct: 1123 SGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIY 1182
Query: 218 IEVESIEKKHGVERDKSSEE-ADNLNFGLVQVVYEWA 253
++ + H + + E D F ++ VVYEWA
Sbjct: 1183 KKMLCVFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWA 1219
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 97 KFYHIYKRKED-HNRLSELKHLLSHKGMSLYAD-YDSKVKVLQELNYINSQGIVQLKGNI 154
+ Y Y RK D H + +LK +S + D + +VL+ L + I++LKG +
Sbjct: 848 ELYGKYSRKHDLHEDMKQLKRKISESQAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRV 907
Query: 155 ACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIA 214
ACE+ S +ELL+TEL+F PE+ AALLSC FQ + L L + + +
Sbjct: 908 ACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELAEPLKAMR 967
Query: 215 DMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEW 252
++ ++ I K +E + + ++ L++VVYEW
Sbjct: 968 EIAAKIAKIMKDSKIEVVEK-DYVESFRHELMEVVYEW 1004
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/145 (33%), Positives = 83/145 (57%)
Query: 111 LSELKHLLSHKGMSLYAD-YDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNELLITEL 169
+ +LK LS + D +S+ +VL+ L + S ++++KG +ACE+ S + LL+TEL
Sbjct: 906 VKDLKKKLSKARSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTEL 965
Query: 170 LFQNKLVNFTPEEIAALLSCLVFQSKTTTPTE-LPESLKQGMSIIADMNIEVESIEKKHG 228
+F + TPE+ AALLSCLVFQ K+ + + E L + I+ +M + + K+
Sbjct: 966 IFNGMFNDLTPEQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESK 1025
Query: 229 VERDKSSEEADNLNFGLVQVVYEWA 253
E ++ E ++ L++VVY WA
Sbjct: 1026 QELNEE-EYVNSFKPSLMEVVYAWA 1049
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 204 (76.9 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 57/172 (33%), Positives = 91/172 (52%)
Query: 92 NTPILK-FYHIYKRKED-HNRLSELKHLLSHKGMSLYA--DYDSKVKVLQELNYINSQGI 147
N+P L+ Y Y K D N++ K +S +GM++ + + +VL+ +IN +
Sbjct: 841 NSPRLEELYEQYAEKLDLGNKIKATKKKIS-EGMAIQQLDELKCRKRVLRRFGFINEAEV 899
Query: 148 VQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKT--TTPTELPES 205
VQLK +ACE+ + +EL+++ELLF TPE+ AA+LS VF+ KT T P E
Sbjct: 900 VQLKARVACEISTGDELMLSELLFNGFFNKLTPEQAAAVLSVFVFEEKTKETPPLSKEEL 959
Query: 206 LKQGMSIIADMNIEVE-SIEKKHGVERDKSSEEADNLNFGLVQVVYEWAMQK 256
K I A I + + E K V + + + ++ L++V+YEWA K
Sbjct: 960 AKPLKEIQAQARIIAKVAQESKLAVSEE---DYVQSFHWELMEVIYEWANGK 1008
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 204 (76.9 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 48/157 (30%), Positives = 85/157 (54%)
Query: 99 YHIYKRKED-HNRLSELKHLLSHKGMSLYADYDSKVK-VLQELNYINSQGIVQLKGNIAC 156
Y Y K D +N++ +L+ + + D S +K VL++L + S+ +V+LKG +A
Sbjct: 883 YAKYTAKVDLNNQIKKLEEQIFQAKSIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAA 942
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM 216
E+ + +EL+ITELLF TP++I LLS +FQ + +L L + +I +
Sbjct: 943 ELSTGDELMITELLFSGFFNELTPQQICGLLSAFIFQERAKELPKLKPELAEPAKVIHET 1002
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ I K+ G+E + + + N LV+VV+ W+
Sbjct: 1003 ANKIAKISKQSGLEIVEK-DYIEQFNLALVEVVFVWS 1038
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 195 (73.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 59/177 (33%), Positives = 95/177 (53%)
Query: 89 GVVNTPILKFYHIYKRKED-HNRLSELKHLLSHKGMSLYADYD---SKVKVLQELNYINS 144
G N P L + YK K + +++ E K ++ K S+ A D S+++VL+ LN+IN
Sbjct: 870 GSPNLPEL--WDKYKIKTELTSQIKETKRAIN-KSYSI-AQLDELKSRMRVLRRLNFINE 925
Query: 145 QGIVQLKGNIACEMGSK--NELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTEL 202
+VQ+K +ACE+ S +EL+I+ELLF PE AA+LSC VF K T L
Sbjct: 926 NEVVQMKARVACEISSTEGHELVISELLFNGFFNELEPEVCAAILSCFVFDEKMEG-TPL 984
Query: 203 PESLKQGMSIIADMNIEVESIEK-KHGVERDKSSEEA-DNLNFGLVQVVYEWAMQKP 257
E L + ++ +++ + ++I + + D S E+ NL + L + V WA +P
Sbjct: 985 KEDLDK---LVREIHAQAKTIARISRESKLDVSDEQVVGNLKWQLTETVLAWAKGRP 1038
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/152 (32%), Positives = 81/152 (53%)
Query: 110 RLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNELLITEL 169
++ L++ LS + L +Y +++KVL+ LN++ Q +V LKG I CE+ + ELLITEL
Sbjct: 1056 KIESLEYELSSDALLLSEEYHNRLKVLEALNFVE-QKMVSLKGRIGCEIHHQ-ELLITEL 1113
Query: 170 LFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQG--MSIIADMNIEVESIEKKH 227
+ K +P E+AALLS L Q + + G + + +ES+ KH
Sbjct: 1114 ILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKH 1173
Query: 228 GVERDKSSEEADNLNFGLVQVVYEWAMQKPHW 259
+ + S+ + F L++VVYEWA P +
Sbjct: 1174 ---KSQISDLGCEIRFDLMEVVYEWANGTPFY 1202
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 183 (69.5 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 49/155 (31%), Positives = 84/155 (54%)
Query: 102 YKRKEDH-NRLSELKHLLSHKGMSLYAD-YDSKVKVLQELNYINSQGIVQLKGNIACEMG 159
+++K+D L+ LK +L+ + +++ +VL+ L Y+ + + LKG++ACE+
Sbjct: 807 FEQKQDAVKELNALKAERKSVQSTLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELS 866
Query: 160 SKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADM--N 217
+ +EL++TE+L + + AALLSC VFQ K P +L L+ +S + + N
Sbjct: 867 ASDELILTEMLLKGIFNTLDVAQTAALLSCFVFQDKCAAP-KLATELQTCLSELHEQARN 925
Query: 218 IEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEW 252
+ S E K V DK + N GL+ VVY+W
Sbjct: 926 VAKVSNECKMEVMEDKY---VSSFNPGLMDVVYQW 957
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 173 (66.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ
Sbjct: 151 RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQ 210
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ +L E L + + + + + + +E D+ + + L+ VVY WA
Sbjct: 211 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 269
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 175 (66.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 92 NTPILK-FYHIYKRKEDHNR-LSELKHLLSHKGMSLYAD-YDSKVKVLQELNYINSQGIV 148
N P L+ Y + +RK + K L L D + +VL+ L + S ++
Sbjct: 800 NDPNLETIYKLCERKAQIAMDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 859
Query: 149 QLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQ 208
++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ + +L E L
Sbjct: 860 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSNEMPKLTEQLAG 919
Query: 209 GMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+ + + + + + +E D+ + ++ L+ VVY WA
Sbjct: 920 PLRQMQECAKRIARVSAEAKLEIDEENY-LNSFRPNLMDVVYTWA 963
Score = 43 (20.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 355 GGTKGPSNVFKIVKMIMERNFQPVIIFS 382
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 174 (66.3 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE S +ELL+TE++F + T E+ ALLSC VFQ
Sbjct: 848 RVLRRLGFATSSDVIEMKGRVACETSSGDELLLTEMMFNGLFNDLTAEQATALLSCFVFQ 907
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+L E L + + + + + + +E D+ S + L+ VVY WA
Sbjct: 908 ENANEMPKLTEQLGGPLRQMQECAKRIAKVSAEAKLEVDEDSY-LNQFRPHLMDVVYTWA 966
Score = 43 (20.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 359 GGTKGPSNVFKIVKMIMERNFQPVIIFS 386
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 174 (66.3 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ
Sbjct: 856 RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQ 915
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ +L E L + + + + + + +E D+ + ++ L+ VVY WA
Sbjct: 916 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LNSFKPHLMDVVYTWA 974
Score = 43 (20.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 366 GGTKGPSNVFKIVKMIMERNFQPVIIFS 393
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 173 (66.0 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ
Sbjct: 755 RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQ 814
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ +L E L + + + + + + +E D+ + + L+ VVY WA
Sbjct: 815 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 873
Score = 43 (20.2 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 265 GGTKGPSNVFKIVKMIMERNFQPVIIFS 292
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 173 (66.0 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ
Sbjct: 854 RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQ 913
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ +L E L + + + + + + +E D+ + + L+ VVY WA
Sbjct: 914 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 972
Score = 43 (20.2 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 364 GGTKGPSNVFKIVKMIMERNFQPVIIFS 391
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 173 (66.0 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 36/120 (30%), Positives = 66/120 (55%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQ 193
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC VFQ
Sbjct: 856 RVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQ 915
Query: 194 SKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
++ +L E L + + + + + + +E D+ + + L+ VVY WA
Sbjct: 916 ENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 974
Score = 43 (20.2 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 366 GGTKGPSNVFKIVKMIMERNFQPVIIFS 393
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 176 (67.0 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 40/154 (25%), Positives = 80/154 (51%)
Query: 102 YKRKEDHN-RLSELKHLLSHKGMSLYAD-YDSKVKVLQELNYINSQGIVQLKGNIACEMG 159
++RK + N + +LK + + + D ++ +VL++L +I++ G+VQ+KG AC +
Sbjct: 774 FQRKAEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLID 833
Query: 160 SKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIADMNIE 219
+ +ELL+TEL+F + ++AAL SC + K+ L L + + + D +
Sbjct: 834 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARK 893
Query: 220 VESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+ I+ + +E D + L+ V+Y W+
Sbjct: 894 IAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWS 927
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/189 (25%), Positives = 93/189 (49%)
Query: 72 SLSMNHTIVNIQ-VQNIWG---VVNTPIL--KFYHIYKRKEDHNRLSELKHLL-SHKGMS 124
S S T+ ++ ++N++ + +P++ K + ++E ++ LK + S ++
Sbjct: 733 SSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKKTVRSSTALA 792
Query: 125 LYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIA 184
+ ++ +VL+ L YI S +V+LKG +ACE+ S EL +TEL+F + EE+
Sbjct: 793 FKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVEELV 852
Query: 185 ALLSCLVFQSKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFG 244
+LLSC V++ + + E L + D V ++ VE D S +
Sbjct: 853 SLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESF-VQSFRPD 911
Query: 245 LVQVVYEWA 253
+++ VY WA
Sbjct: 912 IMEAVYAWA 920
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/133 (30%), Positives = 75/133 (56%)
Query: 99 YHIYKRKED-HNRLSELKHLLSH-KGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIAC 156
YH +++K + ++ ++ +++ + + + + +VL+ L + + ++ +KG +AC
Sbjct: 806 YHEFRKKLNLRAQIKDISTKITNTEAIIQLRELKIRQRVLRRLGFCTLENVIDIKGRVAC 865
Query: 157 EMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPT-ELPESLKQG-MSII- 213
E+ S +ELL+ EL+FQ PEEIAA LSC V++ K+ T L E K+ ++II
Sbjct: 866 EITSGDELLLVELIFQGFFNQMPPEEIAAALSCFVYEDKSEVSTLNLKEPFKKMYLTIIE 925
Query: 214 ADMNIEVESIEKK 226
A I S+E K
Sbjct: 926 AAKRIATVSLESK 938
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 160 (61.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMG---SKNELLITELLFQNKLVNFTPEEIAALLSCL 190
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC
Sbjct: 857 RVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCF 916
Query: 191 VFQSKTTTPTELPESLKQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVY 250
VFQ ++ +L E L + + + + + + +E D+ + + L+ VVY
Sbjct: 917 VFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVY 975
Query: 251 EWA 253
WA
Sbjct: 976 TWA 978
Score = 43 (20.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 367 GGTKGPSNVFKIVKMIMERNFQPVIIFS 394
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 159 (61.0 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 103 KRKEDHNRLSEL-KHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSK 161
K+ E + +L K + S + L D S ++L L YI G+V LKG +ACE+ +
Sbjct: 904 KKNEITKEIKQLQKQIKSGDEVILKDDLRSMKRILTRLGYITDDGVVALKGRVACEISAG 963
Query: 162 NELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPE-SLKQGM----SIIADM 216
+EL+I+ELLF + + E+ A+ SC VFQ++ + ++ +K + +I D
Sbjct: 964 DELVISELLFAGLFNDLSVEQCVAVFSCFVFQNEGSANNDVNNPKIKPDLVPLYRVIRDT 1023
Query: 217 NIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+V ++ ++ + + N + V + WA
Sbjct: 1024 ASKVVTVSQECKLTSVDEKTYLASFNPNFMDVTFAWA 1060
Score = 43 (20.2 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 36 PGPSVNASDPNSSDPPKP 53
PG VN DPN +PP+P
Sbjct: 186 PG-EVN-DDPNLYNPPEP 201
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/157 (24%), Positives = 75/157 (47%)
Query: 101 IYKRKED----HNRLSELK-HLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIA 155
I++R +D +L +LK L + + + + + +VL+ + Y +++ KG +A
Sbjct: 831 IHRRYQDKVTLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVA 890
Query: 156 CEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLKQGMSIIAD 215
CE+ S +ELL+TE++F + T + ALLSC V K++ + L + + D
Sbjct: 891 CELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQD 950
Query: 216 MNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEW 252
+ + + + ++ D + D L+ VV W
Sbjct: 951 LARRIAKVSTECKLDLDADTY-VDKFKPFLMDVVLAW 986
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 142 (55.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 134 KVLQELNYINSQGIVQLKGNIACEMG---SKNELLITELLFQNKLVNFTPEEIAALLSCL 190
+VL+ L + S ++++KG +ACE+ S +ELL+TE++F + + E+ ALLSC
Sbjct: 854 RVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMMFNGLFNDLSAEQATALLSCF 913
Query: 191 VFQSKTTTPTELPESL 206
VFQ ++ +L E L
Sbjct: 914 VFQENSSEMPKLTEQL 929
Score = 43 (20.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 364 GGTKGPSNVFKIVKMIMERNFQPVIIFS 391
>UNIPROTKB|H9L343 [details] [associations]
symbol:H9L343 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0055087 "Ski complex" evidence=IEA]
InterPro:IPR025696 Pfam:PF13234 GeneTree:ENSGT00690000102154
EMBL:AADN02042840 Ensembl:ENSGALT00000036117 OMA:LLSCHEL
Uniprot:H9L343
Length = 131
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 104 RKEDHNRLSELKHLLSHKGMSLYADYDSKVKVLQELNYINSQGIVQLKGNIACEMGSKNE 163
R+ ++ +L++ LS + + L +Y ++ VL+ L Y+ G VQL G +A + S +E
Sbjct: 60 RRRLQAQVEQLQYELSDRSLLLLPEYRQRLGVLRALGYVADGGAVQLPGRVAALL-SCHE 118
Query: 164 LLITELLFQNKL 175
LL+TELL N L
Sbjct: 119 LLLTELLLGNVL 130
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 118 (46.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 147 IVQLKGNIACEMGSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESL 206
++ KG C +ELL+TE++F + + E+ ALLSC VFQ ++ +L E L
Sbjct: 591 LIHRKGYHFCYKSCADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQL 650
Query: 207 KQGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+ + + + + + +E D+ + + L+ VVY WA
Sbjct: 651 AGPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 696
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 110 GGTKGPSNVFKIVKMIMERNFQPVIIFS 137
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 149 QLKGNIACEM-GSKNELLITELLFQNKLVNFTPEEIAALLSCLVFQSKTTTPTELPESLK 207
QLK ++ + S +ELL+TE++F + + E+ ALLSC VFQ ++ +L E L
Sbjct: 874 QLKHRVSLTVHSSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLA 933
Query: 208 QGMSIIADMNIEVESIEKKHGVERDKSSEEADNLNFGLVQVVYEWA 253
+ + + + + + +E D+ + + L+ VVY WA
Sbjct: 934 GPLRQMQECAKRIAKVSAEAKLEIDEETY-LSSFKPHLMDVVYTWA 978
Score = 43 (20.2 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 4 GKSRGPIGVFKITKESRTIWCRRVLIFT 31
G ++GP VFKI K + V+IF+
Sbjct: 366 GGTKGPSNVFKIVKMIMERNFQPVIIFS 393
Score = 37 (18.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 86 NIWGVVNTPILKFYHIYKRK 105
N GV+N P + +Y K+K
Sbjct: 616 NFVGVMNRPHMPWYTSTKQK 635
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 259 0.00088 114 3 11 22 0.49 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 609 (65 KB)
Total size of DFA: 195 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.46u 0.08s 28.54t Elapsed: 00:00:18
Total cpu time: 28.47u 0.08s 28.55t Elapsed: 00:00:18
Start: Thu Aug 15 13:34:04 2013 End: Thu Aug 15 13:34:22 2013