BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy13858
MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGE
FLTRGDFRWE

High Scoring Gene Products

Symbol, full name Information P value
tst
twister
protein from Drosophila melanogaster 9.7e-17
skiv2l
superkiller viralicidic activity 2 (S. cerevisiae homolog)-like
gene_product from Danio rerio 6.6e-15
SKIV2L
Uncharacterized protein
protein from Homo sapiens 7.9e-14
SKIV2L
Helicase SKI2W
protein from Homo sapiens 9.8e-14
SKIV2L
Uncharacterized protein
protein from Sus scrofa 9.8e-14
Skiv2l
superkiller viralicidic activity 2-like (S. cerevisiae )
gene from Rattus norvegicus 1.3e-13
LOC100852213
Uncharacterized protein
protein from Bos taurus 1.3e-13
SKIV2L
Uncharacterized protein
protein from Canis lupus familiaris 1.3e-13
skih-2 gene from Caenorhabditis elegans 1.5e-12
SKI2 gene_product from Candida albicans 4.5e-11
DDB_G0277211
superkiller viralicidic activity 2-like protein
gene from Dictyostelium discoideum 4.7e-10
AT3G46960 protein from Arabidopsis thaliana 7.4e-10
SKI2
Ski complex component and putative RNA helicase
gene from Saccharomyces cerevisiae 3.1e-09
PFF0100w
putative ATP dependent RNA helicase
gene from Plasmodium falciparum 5.0e-06
MTR4
homolog of yeast MTR4
protein from Arabidopsis thaliana 5.7e-06
mtr-4 gene from Caenorhabditis elegans 7.7e-06
DDB_G0275633
superkiller viralicidic activity 2-like protein
gene from Dictyostelium discoideum 1.0e-05
skiv2l2
superkiller viralicidic activity 2-like 2
gene_product from Danio rerio 2.6e-05
SKIV2L2
Uncharacterized protein
protein from Bos taurus 4.7e-05
l(2)35Df
lethal (2) 35Df
protein from Drosophila melanogaster 5.6e-05
SKIV2L2
Uncharacterized protein
protein from Bos taurus 8.0e-05
SKIV2L2
Superkiller viralicidic activity 2-like 2
protein from Homo sapiens 8.1e-05
Skiv2l2
superkiller viralicidic activity 2-like 2 (S. cerevisiae)
protein from Mus musculus 9.1e-05
SKIV2L2
Uncharacterized protein
protein from Canis lupus familiaris 9.1e-05
SKIV2L2
Superkiller viralicidic activity 2-like 2
protein from Homo sapiens 9.1e-05
SKIV2L2
Uncharacterized protein
protein from Sus scrofa 9.1e-05
MTR4
ATP-dependent 3'-5' RNA helicase of the DExD/H family
gene from Saccharomyces cerevisiae 0.00012
orf19.1335 gene_product from Candida albicans 0.00012

The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy13858
        (70 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso...   220  9.7e-17   1
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral...   203  6.6e-15   1
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species...   192  7.9e-14   1
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species...   192  7.9e-14   1
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s...   192  8.3e-14   1
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species...   192  8.3e-14   1
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species...   192  9.8e-14   1
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein...   192  9.8e-14   1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species...   191  1.2e-13   1
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti...   191  1.3e-13   1
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p...   191  1.3e-13   1
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein...   191  1.3e-13   1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA...   188  2.5e-13   1
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab...   181  1.5e-12   1
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer...   174  8.5e-12   1
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ...   167  4.5e-11   1
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller...   158  4.7e-10   1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi...   156  7.4e-10   1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p...   150  3.1e-09   1
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A...   120  5.0e-06   1
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ...   118  5.7e-06   1
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd...   117  7.7e-06   1
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller...   109  1.0e-05   2
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A...   113  2.1e-05   1
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v...   112  2.6e-05   1
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei...   107  4.7e-05   1
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie...   109  5.6e-05   1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein...   107  6.3e-05   1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei...   107  8.0e-05   1
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi...   107  8.1e-05   1
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic...   107  9.1e-05   1
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei...   107  9.1e-05   1
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi...   107  9.1e-05   1
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei...   107  9.1e-05   1
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein...   107  9.1e-05   1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel...   106  0.00012   1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ...   106  0.00012   1
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel...   106  0.00013   1
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric...   102  0.00032   1


>FB|FBgn0039117 [details] [associations]
            symbol:tst "twister" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
            ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
            PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
            OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
        Length = 1197

 Score = 220 (82.5 bits), Expect = 9.7e-17, P = 9.7e-17
 Identities = 43/68 (63%), Positives = 56/68 (82%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPV-LEKNQLFLIREAEG 59
             MLSATVPNTLE ADWVG+TKK KVYV+STLKRPVPL HFLY G     ++ +FL+ +A+G
Sbjct:   404 MLSATVPNTLELADWVGSTKKRKVYVISTLKRPVPLTHFLYTGAGGKSRDDIFLLVDAQG 463

Query:    60 EFLTRGDF 67
             ++L +G++
Sbjct:   464 KYL-QGNY 470


>ZFIN|ZDB-GENE-010430-5 [details] [associations]
            symbol:skiv2l "superkiller viralicidic activity 2 (S.
            cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
            IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
            Uniprot:F1R881
        Length = 1249

 Score = 203 (76.5 bits), Expect = 6.6e-15, P = 6.6e-15
 Identities = 35/66 (53%), Positives = 52/66 (78%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN +EF++W+G  KK  +YV+ST+KRPVPL+H+LY G   + + +LF++ +A G
Sbjct:   460 LLSATVPNAVEFSEWIGRIKKRHIYVISTIKRPVPLEHYLYTGNSTKTQKELFMLLDATG 519

Query:    60 EFLTRG 65
              FLT+G
Sbjct:   520 NFLTKG 525


>UNIPROTKB|F5H7B0 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
            InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
            IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
            Ensembl:ENST00000546549 Uniprot:F5H7B0
        Length = 1053

 Score = 192 (72.6 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   259 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRG 318

Query:    60 EFLTRG 65
              F T+G
Sbjct:   319 AFHTKG 324


>UNIPROTKB|F8VS23 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
            EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
            SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
            Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
            Uniprot:F8VS23
        Length = 1053

 Score = 192 (72.6 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   259 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRG 318

Query:    60 EFLTRG 65
              F T+G
Sbjct:   319 AFHTKG 324


>UNIPROTKB|B4DM01 [details] [associations]
            symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
            SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
            InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
            HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
            IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
            Uniprot:B4DM01
        Length = 1088

 Score = 192 (72.6 bits), Expect = 8.3e-14, P = 8.3e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   294 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRG 353

Query:    60 EFLTRG 65
              F T+G
Sbjct:   354 AFHTKG 359


>UNIPROTKB|F8VNU1 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
            EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
            SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
            Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
            Uniprot:F8VNU1
        Length = 1088

 Score = 192 (72.6 bits), Expect = 8.3e-14, P = 8.3e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   294 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRG 353

Query:    60 EFLTRG 65
              F T+G
Sbjct:   354 AFHTKG 359


>UNIPROTKB|Q15477 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
            complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
            EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
            UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
            STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
            PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
            Ensembl:ENST00000383336 Ensembl:ENST00000412823
            Ensembl:ENST00000421789 Ensembl:ENST00000429465
            Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
            CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
            H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
            H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
            MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
            HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
            PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
            ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
            Genevestigator:Q15477 Uniprot:Q15477
        Length = 1246

 Score = 192 (72.6 bits), Expect = 9.8e-14, P = 9.8e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   452 LLSATVPNALEFADWIGRLKRRQIYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLDSRG 511

Query:    60 EFLTRG 65
              F T+G
Sbjct:   512 AFHTKG 517


>UNIPROTKB|F1RQW4 [details] [associations]
            symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
            EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
            Uniprot:F1RQW4
        Length = 1246

 Score = 192 (72.6 bits), Expect = 9.8e-14, P = 9.8e-14
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   452 LLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRG 511

Query:    60 EFLTRG 65
              F T+G
Sbjct:   512 SFHTKG 517


>UNIPROTKB|F1LP39 [details] [associations]
            symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
            OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
            Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
        Length = 1206

 Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   411 LLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRG 470

Query:    60 EFLTRG 65
              F T+G
Sbjct:   471 AFHTKG 476


>RGD|1303059 [details] [associations]
            symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
            cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
            complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
            KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
            IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
            ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
            PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
            InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
            Genevestigator:Q6MG76 Uniprot:Q6MG76
        Length = 1241

 Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   446 LLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRG 505

Query:    60 EFLTRG 65
              F T+G
Sbjct:   506 AFHTKG 511


>UNIPROTKB|E1BMS0 [details] [associations]
            symbol:LOC100139548 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
            EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
            RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
            KEGG:bta:100139548 Uniprot:E1BMS0
        Length = 1246

 Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   452 LLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRG 511

Query:    60 EFLTRG 65
              F T+G
Sbjct:   512 AFHTKG 517


>UNIPROTKB|E2RSD6 [details] [associations]
            symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
            CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
            ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
            KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
        Length = 1246

 Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             +LSATVPN LEFADW+G  K+ ++YV+ST+ RPVPL+H+L+ G   + + +LFL+ ++ G
Sbjct:   452 LLSATVPNALEFADWIGRLKRRQIYVISTVARPVPLEHYLFTGNSPKTQGELFLLLDSRG 511

Query:    60 EFLTRG 65
              F T+G
Sbjct:   512 AFHTKG 517


>POMBASE|SPCC550.03c [details] [associations]
            symbol:SPCC550.03c "Ski complex RNA helicase Ski2
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
            process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
            [GO:0071276 "cellular response to cadmium ion" evidence=IMP]
            [GO:0071585 "detoxification of cadmium ion" evidence=IMP]
            [GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
            EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
            GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
            RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
            EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
            NextBio:20800023 Uniprot:O59801
        Length = 1213

 Score = 188 (71.2 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 38/65 (58%), Positives = 46/65 (70%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGE 60
             +LSATVPNT EFA WVG TKK  +YV+STLKRPVPL+H+L+V     K  +F I +  G 
Sbjct:   422 LLSATVPNTKEFASWVGRTKKKNIYVISTLKRPVPLEHYLWV-----KQNMFKIVDQHGR 476

Query:    61 FLTRG 65
             FL  G
Sbjct:   477 FLMDG 481


>WB|WBGene00008502 [details] [associations]
            symbol:skih-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
            GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
            ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
            EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
            UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
            NextBio:899374 Uniprot:Q19103
        Length = 1266

 Score = 181 (68.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 36/66 (54%), Positives = 47/66 (71%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLE-KNQLFLIREAEG 59
             MLSATVPN +EFADWVG  K  K+ V+ST +RPVPL+HFLY G   + +  LF I +  G
Sbjct:   434 MLSATVPNCVEFADWVGRIKNRKINVISTDRRPVPLEHFLYTGQDGKTQKDLFKIIDRSG 493

Query:    60 EFLTRG 65
             +F+ +G
Sbjct:   494 QFILKG 499


>ASPGD|ASPL0000004985 [details] [associations]
            symbol:AN6007 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
            RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
            EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
            Uniprot:Q5B0C3
        Length = 1293

 Score = 174 (66.3 bits), Expect = 8.5e-12, P = 8.5e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGP----VLEKNQLFL 53
             +LSATVPNT EFA WVG TKK  +YV+ST KRPVPL+H+L+ G     +++ N+ FL
Sbjct:   464 LLSATVPNTQEFASWVGRTKKKDIYVISTAKRPVPLEHYLWAGKDKFKIVDSNKRFL 520


>CGD|CAL0002171 [details] [associations]
            symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
            [GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
            exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
            "nuclear-transcribed mRNA catabolic process, non-stop decay"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
            EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
            RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
            GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
            KEGG:cal:CaO19.6425 Uniprot:Q5A337
        Length = 1245

 Score = 167 (63.8 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 37/68 (54%), Positives = 46/68 (67%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGE 60
             +LSATVPNT EFA+WVG TK+  +YV+ST KRPVPL+ F     V  KNQLF + +A   
Sbjct:   433 LLSATVPNTFEFANWVGRTKQKDIYVISTPKRPVPLEIF-----VSAKNQLFKVVDANRR 487

Query:    61 FLTRGDFR 68
             F    +FR
Sbjct:   488 F-QENEFR 494


>DICTYBASE|DDB_G0277211 [details] [associations]
            symbol:DDB_G0277211 "superkiller viralicidic activity
            2-like protein" species:44689 "Dictyostelium discoideum"
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
            GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
            Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
            ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
            KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
        Length = 1378

 Score = 158 (60.7 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 31/64 (48%), Positives = 43/64 (67%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSATV N LEFA W+G TK+  +YV+ T KRP+PL+H+++  P    N+LF I ++   F
Sbjct:   576 LSATVSNPLEFAQWIGRTKQLPIYVIGTTKRPIPLEHYIHT-P---SNELFKIVDSNRNF 631

Query:    62 LTRG 65
             L  G
Sbjct:   632 LPSG 635


>TAIR|locus:2075566 [details] [associations]
            symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
            evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
            [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
            "chromatin silencing by small RNA" evidence=RCA] [GO:0045132
            "meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
            EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
            RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
            ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
            EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
            GO:GO:0035864 Uniprot:F4JAA5
        Length = 1347

 Score = 156 (60.0 bits), Expect = 7.4e-10, P = 7.4e-10
 Identities = 31/56 (55%), Positives = 40/56 (71%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEK---NQLFL 53
             +LSATVPNT EFADW+G TK+ ++ V  T KRPVPL+H L+    L K   N++FL
Sbjct:   501 LLSATVPNTFEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKVCENEVFL 556


>SGD|S000004390 [details] [associations]
            symbol:SKI2 "Ski complex component and putative RNA helicase"
            species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
            "nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
            nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
            complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
            catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
            "nuclear-transcribed mRNA catabolic process, non-stop decay"
            evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
            GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
            GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
            GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
            RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
            InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
            KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
            RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
            ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
            MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
            EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
            GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
            GermOnline:YLR398C Uniprot:P35207
        Length = 1287

 Score = 150 (57.9 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 30/57 (52%), Positives = 41/57 (71%)

Query:     1 MLSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVG----PVLEKNQLFL 53
             +LSATVPNT EFA+W+G TK+  +YV+ST KRPVPL+  ++      PV+ +N  FL
Sbjct:   473 LLSATVPNTYEFANWIGRTKQKNIYVISTPKRPVPLEINIWAKKELIPVINQNSEFL 529


>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
            symbol:PFF0100w "putative ATP dependent RNA
            helicase" species:5833 "Plasmodium falciparum" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
            InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
            ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
            GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
            OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
        Length = 1350

 Score = 120 (47.3 bits), Expect = 5.0e-06, P = 5.0e-06
 Identities = 24/60 (40%), Positives = 39/60 (65%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN ++FA+WV + K    ++V T  RP PL+H++Y  P   ++ +FLI +   +F
Sbjct:   397 LSATIPNGIQFAEWVSSIKSQACHIVYTDYRPTPLQHYIY--PTSSES-VFLICDENKDF 453


>TAIR|locus:2026001 [details] [associations]
            symbol:MTR4 "homolog of yeast MTR4" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
            [GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
            "double-strand break repair via homologous recombination"
            evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
            "protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
            egg cell differentiation" evidence=RCA] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
            flower development" evidence=RCA] [GO:0010074 "maintenance of
            meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
            radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
            "protein deubiquitination" evidence=RCA] [GO:0030422 "production of
            siRNA involved in RNA interference" evidence=RCA] [GO:0035196
            "production of miRNAs involved in gene silencing by miRNA"
            evidence=RCA] [GO:0043687 "post-translational protein modification"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
            evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
            HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
            RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
            SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
            GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
            PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
            Genevestigator:Q9XIF2 Uniprot:Q9XIF2
        Length = 988

 Score = 118 (46.6 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 27/60 (45%), Positives = 36/60 (60%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSATVPN  EFADWV    +   ++V T  RP PL+H  YV P    N L+L+ + + +F
Sbjct:   210 LSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQH--YVFPA-GGNGLYLVVDEKSKF 266


>WB|WBGene00012342 [details] [associations]
            symbol:mtr-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
            "feminization of hermaphroditic germ-line" evidence=IMP]
            [GO:0007281 "germ cell development" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
            GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
            GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
            RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
            MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
            GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
            GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
            KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
            Pfam:PF13234 Uniprot:Q23223
        Length = 1026

 Score = 117 (46.2 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA WV + K+  V VV T  RP PL+H++Y  PV  +  ++ +   +GEF
Sbjct:   268 LSATIPNARQFAQWVASIKQQPVNVVYTDYRPTPLQHWIY--PVGGEG-MYEVVNVKGEF 324


>DICTYBASE|DDB_G0275633 [details] [associations]
            symbol:DDB_G0275633 "superkiller viralicidic activity
            2-like protein" species:44689 "Dictyostelium discoideum"
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
            GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
            InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
            ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
            GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
            ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
        Length = 1128

 Score = 109 (43.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLY 41
             LSAT+PN  EFA W+    K   +VV T  RP+PL+H+++
Sbjct:   354 LSATIPNAREFAAWIAKIHKQPCHVVYTEYRPIPLQHYIF 393

 Score = 32 (16.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query:    41 YVGPVLEKNQLFLIREAEGEF 61
             YV P L   ++  IRE   ++
Sbjct:   722 YVQPFLTAGRIVRIREGSTDW 742

 Score = 31 (16.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query:    48 KNQLFLIREAEGEFLTR 64
             K QL  +REA  +F+ +
Sbjct:   703 KAQLAKLREAMRDFINQ 719


>POMBASE|SPAC17H9.02 [details] [associations]
            symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
            helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
            "rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
            process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
            [GO:0043630 "ncRNA polyadenylation involved in
            polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
            [GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
            the site of transcription" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
            EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
            GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
            HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
            OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
            ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
            GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
            Uniprot:O13799
        Length = 1030

 Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 21/40 (52%), Positives = 27/40 (67%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLY 41
             LSAT+PN L+FA W+    K   +VV T  RP PL+HF+Y
Sbjct:   268 LSATLPNALQFARWISEIHKQPCHVVYTDYRPTPLQHFIY 307


>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
            symbol:skiv2l2 "superkiller viralicidic activity
            2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
            evidence=IMP] [GO:0051781 "positive regulation of cell division"
            evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
            GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
            InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
            OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
            UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
            PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
            Bgee:Q6P7X6 Uniprot:Q6P7X6
        Length = 1034

 Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSATVPN  +FA+W+ +  K   +VV T  RP PL+H+++  P    + L L+ +  GEF
Sbjct:   270 LSATVPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGEF 326


>UNIPROTKB|G3MYJ7 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
            EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
            Uniprot:G3MYJ7
        Length = 605

 Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   280 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 336


>FB|FBgn0001986 [details] [associations]
            symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
            melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
            2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
            OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
            RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
            STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
            KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
            InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
            Uniprot:Q9Y134
        Length = 1055

 Score = 109 (43.4 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+WV +  K   +VV T  RP PL+H+++  P    + + LI + +G+F
Sbjct:   294 LSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIF--PA-GGDGIHLIVDEKGQF 350


>UNIPROTKB|D4AE49 [details] [associations]
            symbol:D4AE49 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
            GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
            IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
            ArrayExpress:D4AE49 Uniprot:D4AE49
        Length = 764

 Score = 107 (42.7 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:    26 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 82


>UNIPROTKB|F1MJX4 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
            "exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
            GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
            EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
            Uniprot:F1MJX4
        Length = 937

 Score = 107 (42.7 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   280 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 336


>UNIPROTKB|F5H7E2 [details] [associations]
            symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
            EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
            Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
            Bgee:F5H7E2 Uniprot:F5H7E2
        Length = 941

 Score = 107 (42.7 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   181 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 237


>MGI|MGI:1919448 [details] [associations]
            symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
            (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
            rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
            GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
            GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
            OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
            HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
            EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
            ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
            PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
            Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
            UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
            Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
        Length = 1040

 Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   280 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 336


>UNIPROTKB|E2RCI5 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
            InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
            RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
            KEGG:cfa:607950 Uniprot:E2RCI5
        Length = 1042

 Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   282 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 338


>UNIPROTKB|P42285 [details] [associations]
            symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
            evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
            KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
            EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
            EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
            RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
            SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
            DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
            PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
            KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
            HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
            PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
            OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
            NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
            Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
        Length = 1042

 Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   282 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 338


>UNIPROTKB|F1SLL6 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
            "exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
            GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
            Uniprot:F1SLL6
        Length = 1046

 Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   283 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 339


>UNIPROTKB|F1MAH7 [details] [associations]
            symbol:F1MAH7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
            Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
        Length = 1046

 Score = 107 (42.7 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN  +FA+W+ +  K   +V+ T  RP PL+H+++  P    + L L+ +  G+F
Sbjct:   282 LSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIF--PA-GGDGLHLVVDENGDF 338


>SGD|S000003586 [details] [associations]
            symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
            family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
            "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
            evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
            mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
            "ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
            polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
            [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
            process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
            mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
            polyadenylation-dependent mRNA catabolic process" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
            RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
            helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
            processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
            "nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
            transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0071051
            "polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
            GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
            GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
            GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
            GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
            KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
            OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
            RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
            ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
            MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
            EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
            EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
            GermOnline:YJL050W Uniprot:P47047
        Length = 1073

 Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLY 41
             LSAT+PN +EFA+W+        ++V T  RP PL+H+L+
Sbjct:   292 LSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLF 331


>CGD|CAL0003794 [details] [associations]
            symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
            3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
            "U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
            retention of pre-mRNA with aberrant 3'-ends at the site of
            transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
            to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
            process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
            evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
            processing" evidence=IEA] [GO:0071042 "nuclear
            polyadenylation-dependent mRNA catabolic process" evidence=IEA]
            [GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
            process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
            EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
            Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
            RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
            GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
            KEGG:cal:CaO19_1335 Uniprot:Q59PN6
        Length = 1106

 Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLY 41
             LSAT+PN +EFA+W+        +VV T  RP PL+H+L+
Sbjct:   327 LSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPLQHYLF 366


>POMBASE|SPAC6F12.16c [details] [associations]
            symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
            subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
            evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
            [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
            polyadenylation involved in polyadenylation-dependent ncRNA
            catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
            pre-mRNA with aberrant 3'-ends at the site of transcription"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
            GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
            Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
            ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
            GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
            NextBio:20802732 GO:GO:0071049 Uniprot:O14232
        Length = 1117

 Score = 106 (42.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 18/40 (45%), Positives = 28/40 (70%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLY 41
             LSAT+PN ++FA+W+    +   +VV T  RP PL+H+L+
Sbjct:   341 LSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLF 380


>ASPGD|ASPL0000070749 [details] [associations]
            symbol:mtr4 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
            complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
            GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
            EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
            GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
            HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
            ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
            EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
            Uniprot:Q5B4W8
        Length = 1073

 Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query:     2 LSATVPNTLEFADWVGNTKKTKVYVVSTLKRPVPLKHFLYVGPVLEKNQLFLIREAEGEF 61
             LSAT+PN ++FA+W+        +VV T  RP PL+H+ +  P   +  + LI + +G F
Sbjct:   295 LSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFF--PAGSEG-MHLIVDEKGVF 351


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       70        70   0.00091  102 3  11 22  0.47    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  39
  No. of states in DFA:  505 (54 KB)
  Total size of DFA:  93 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.02u 0.12s 8.14t   Elapsed:  00:00:01
  Total cpu time:  8.02u 0.12s 8.14t   Elapsed:  00:00:01
  Start:  Thu Aug 15 13:35:31 2013   End:  Thu Aug 15 13:35:32 2013

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