Query psy13875
Match_columns 105
No_of_seqs 149 out of 1070
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 22:38:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 99.9 5.8E-26 2E-30 163.5 9.9 97 4-101 96-192 (216)
2 3tue_A Tryparedoxin peroxidase 99.9 4.4E-25 1.5E-29 159.2 9.9 96 4-100 100-195 (219)
3 3a2v_A Probable peroxiredoxin; 99.7 7.5E-18 2.6E-22 123.0 10.5 94 5-100 78-172 (249)
4 4eo3_A Bacterioferritin comigr 99.7 9E-18 3.1E-22 126.2 8.8 76 4-90 64-139 (322)
5 1xcc_A 1-Cys peroxiredoxin; un 99.7 8.1E-18 2.8E-22 120.1 8.1 95 5-100 76-176 (220)
6 1prx_A HORF6; peroxiredoxin, h 99.7 2.4E-17 8.3E-22 117.9 10.0 95 5-100 76-179 (224)
7 3tjj_A Peroxiredoxin-4; thiore 99.7 2.6E-17 8.9E-22 120.1 9.6 95 5-100 136-230 (254)
8 2v2g_A Peroxiredoxin 6; oxidor 99.7 2.4E-17 8.1E-22 119.0 8.6 95 5-100 74-175 (233)
9 3qpm_A Peroxiredoxin; oxidored 99.7 7.7E-17 2.6E-21 116.4 10.3 95 5-100 122-216 (240)
10 4gqc_A Thiol peroxidase, perox 99.7 1.2E-16 4.1E-21 109.0 9.0 78 4-89 77-159 (164)
11 4g2e_A Peroxiredoxin; redox pr 99.7 3E-16 1E-20 105.9 9.8 77 5-89 75-157 (157)
12 1n8j_A AHPC, alkyl hydroperoxi 99.7 4.1E-16 1.4E-20 107.8 10.2 92 5-100 75-167 (186)
13 1uul_A Tryparedoxin peroxidase 99.7 9.6E-16 3.3E-20 106.8 10.3 95 5-100 81-175 (202)
14 2i81_A 2-Cys peroxiredoxin; st 99.6 8.8E-16 3E-20 108.6 10.1 94 5-100 97-190 (213)
15 2pn8_A Peroxiredoxin-4; thiore 99.6 8.4E-16 2.9E-20 108.6 9.5 95 5-100 93-187 (211)
16 1zye_A Thioredoxin-dependent p 99.6 1.5E-15 5.1E-20 107.8 9.7 95 5-100 101-195 (220)
17 2c0d_A Thioredoxin peroxidase 99.6 2.8E-15 9.6E-20 107.0 10.5 94 5-100 101-194 (221)
18 1qmv_A Human thioredoxin perox 99.6 3.5E-15 1.2E-19 103.4 10.0 95 5-100 79-173 (197)
19 1xiy_A Peroxiredoxin, pfaop; a 99.6 2.4E-15 8.4E-20 105.2 8.8 76 4-88 90-180 (182)
20 2h01_A 2-Cys peroxiredoxin; th 99.6 2.6E-15 8.9E-20 103.6 8.8 94 5-100 76-169 (192)
21 3keb_A Probable thiol peroxida 99.6 5.3E-15 1.8E-19 106.7 10.4 79 4-90 92-176 (224)
22 3mng_A Peroxiredoxin-5, mitoch 99.6 1.8E-15 6.2E-20 104.6 7.6 75 5-88 90-173 (173)
23 3ztl_A Thioredoxin peroxidase; 99.6 2.3E-14 7.8E-19 101.7 10.6 95 5-100 114-208 (222)
24 2xhf_A Peroxiredoxin 5; oxidor 99.5 1.8E-14 6.1E-19 100.0 5.9 74 4-86 87-170 (171)
25 4f82_A Thioredoxin reductase; 99.5 2.1E-14 7.2E-19 100.2 6.3 72 4-85 93-174 (176)
26 1we0_A Alkyl hydroperoxide red 99.5 9.9E-14 3.4E-18 95.1 9.0 92 5-100 76-168 (187)
27 3p7x_A Probable thiol peroxida 99.5 1.8E-13 6.1E-18 92.3 9.6 76 5-88 88-166 (166)
28 1psq_A Probable thiol peroxida 99.5 5.4E-13 1.9E-17 89.7 10.2 76 5-88 85-163 (163)
29 1zof_A Alkyl hydroperoxide-red 99.5 1.9E-13 6.4E-18 94.6 8.1 94 5-100 78-171 (198)
30 3drn_A Peroxiredoxin, bacterio 99.4 4.1E-13 1.4E-17 90.0 8.4 84 5-98 74-157 (161)
31 3ixr_A Bacterioferritin comigr 99.4 1.4E-12 4.8E-17 89.3 8.6 77 5-90 96-178 (179)
32 2bmx_A Alkyl hydroperoxidase C 99.4 2.5E-12 8.5E-17 88.8 9.7 86 5-99 90-175 (195)
33 3uma_A Hypothetical peroxiredo 99.4 9.9E-13 3.4E-17 91.5 6.9 71 5-84 103-183 (184)
34 3gkn_A Bacterioferritin comigr 99.4 2.2E-12 7.4E-17 86.0 8.3 77 5-90 80-162 (163)
35 1xvw_A Hypothetical protein RV 99.4 5.1E-12 1.7E-16 83.9 9.5 77 5-89 81-159 (160)
36 2yzh_A Probable thiol peroxida 99.3 6.3E-12 2.2E-16 84.9 9.4 75 5-88 90-170 (171)
37 3zrd_A Thiol peroxidase; oxido 99.3 2.9E-12 1E-16 89.6 6.8 74 5-86 121-200 (200)
38 1nm3_A Protein HI0572; hybrid, 99.3 6.8E-12 2.3E-16 89.3 8.3 76 5-89 80-166 (241)
39 1tp9_A Peroxiredoxin, PRX D (t 99.3 4E-12 1.4E-16 85.7 6.5 70 5-84 82-161 (162)
40 1q98_A Thiol peroxidase, TPX; 99.3 3.9E-12 1.3E-16 85.7 5.9 73 5-85 86-164 (165)
41 2pwj_A Mitochondrial peroxired 99.3 6.1E-12 2.1E-16 86.0 6.7 73 5-84 90-170 (171)
42 2jsy_A Probable thiol peroxida 99.2 1.4E-11 4.7E-16 82.5 5.9 76 6-89 88-166 (167)
43 1xvq_A Thiol peroxidase; thior 99.2 7.7E-11 2.6E-15 80.1 7.1 75 5-87 86-165 (175)
44 2wfc_A Peroxiredoxin 5, PRDX5; 99.2 5.8E-11 2E-15 81.0 6.3 72 5-85 78-159 (167)
45 2a4v_A Peroxiredoxin DOT5; yea 99.1 1.7E-10 5.8E-15 76.8 5.9 72 5-87 79-151 (159)
46 3eyt_A Uncharacterized protein 99.0 2.9E-09 1E-13 70.0 8.9 68 4-89 79-151 (158)
47 2f9s_A Thiol-disulfide oxidore 99.0 3.7E-09 1.3E-13 69.1 8.8 68 5-90 71-138 (151)
48 3lor_A Thiol-disulfide isomera 99.0 4.2E-09 1.4E-13 69.2 9.1 68 4-89 81-154 (160)
49 3kcm_A Thioredoxin family prot 99.0 4.1E-09 1.4E-13 68.8 8.6 72 5-92 74-145 (154)
50 3u5r_E Uncharacterized protein 98.9 7.4E-09 2.5E-13 72.7 9.2 73 4-90 110-187 (218)
51 2ywi_A Hypothetical conserved 98.9 8E-09 2.7E-13 70.3 9.0 73 4-90 97-174 (196)
52 4evm_A Thioredoxin family prot 98.9 9.2E-09 3.1E-13 64.9 8.3 65 6-88 72-137 (138)
53 3gl3_A Putative thiol:disulfid 98.9 1.3E-08 4.6E-13 66.2 9.1 68 6-89 74-141 (152)
54 3raz_A Thioredoxin-related pro 98.8 1.2E-08 4.2E-13 66.8 7.7 70 5-92 68-142 (151)
55 1lu4_A Soluble secreted antige 98.8 2.2E-08 7.7E-13 63.6 8.6 68 5-88 67-134 (136)
56 2b5x_A YKUV protein, TRXY; thi 98.8 2.2E-08 7.5E-13 64.4 8.5 67 5-89 78-144 (148)
57 2hyx_A Protein DIPZ; thioredox 98.8 2E-08 6.9E-13 76.2 9.5 70 5-92 132-201 (352)
58 1xzo_A BSSCO, hypothetical pro 98.8 1.4E-08 4.6E-13 67.7 7.4 76 4-89 83-171 (174)
59 3erw_A Sporulation thiol-disul 98.8 2.5E-08 8.5E-13 63.9 8.3 63 5-85 82-144 (145)
60 1jfu_A Thiol:disulfide interch 98.8 1.5E-08 5.2E-13 68.5 7.5 72 6-89 107-179 (186)
61 3hdc_A Thioredoxin family prot 98.8 8E-09 2.7E-13 68.3 5.9 61 24-92 94-154 (158)
62 3kh7_A Thiol:disulfide interch 98.8 9.4E-09 3.2E-13 69.7 6.3 66 5-88 99-165 (176)
63 2cvb_A Probable thiol-disulfid 98.8 2.1E-08 7.1E-13 68.0 8.1 69 5-89 84-158 (188)
64 3ia1_A THIO-disulfide isomeras 98.8 1.3E-08 4.6E-13 66.5 6.2 70 5-92 74-146 (154)
65 2l5o_A Putative thioredoxin; s 98.8 3.6E-08 1.2E-12 64.2 7.9 67 5-89 74-140 (153)
66 3lwa_A Secreted thiol-disulfid 98.8 5.3E-08 1.8E-12 65.7 8.7 70 5-89 111-180 (183)
67 3fw2_A Thiol-disulfide oxidore 98.7 4E-08 1.4E-12 64.3 7.5 63 6-89 82-147 (150)
68 2ggt_A SCO1 protein homolog, m 98.7 4.1E-08 1.4E-12 64.6 7.6 73 5-89 76-160 (164)
69 1zzo_A RV1677; thioredoxin fol 98.7 1.2E-07 4E-12 60.0 8.9 65 5-88 68-133 (136)
70 2rli_A SCO2 protein homolog, m 98.7 9.3E-08 3.2E-12 63.4 8.7 75 4-90 78-164 (171)
71 2k6v_A Putative cytochrome C o 98.7 1.3E-08 4.5E-13 67.5 4.5 74 4-88 86-171 (172)
72 2b1k_A Thiol:disulfide interch 98.7 8.5E-08 2.9E-12 63.7 8.1 66 5-88 92-158 (168)
73 1kng_A Thiol:disulfide interch 98.7 1.2E-07 4.2E-12 61.7 8.7 66 5-88 84-150 (156)
74 4h86_A Peroxiredoxin type-2; o 98.7 4E-08 1.4E-12 69.7 6.7 75 5-84 117-198 (199)
75 3ewl_A Uncharacterized conserv 98.6 1.3E-07 4.4E-12 60.9 7.6 53 24-89 86-140 (142)
76 2h30_A Thioredoxin, peptide me 98.6 1.5E-07 5E-12 61.9 8.0 56 24-89 99-155 (164)
77 3hcz_A Possible thiol-disulfid 98.6 9.6E-08 3.3E-12 61.4 6.8 65 6-88 77-144 (148)
78 2lrn_A Thiol:disulfide interch 98.6 9.5E-08 3.2E-12 62.6 6.7 53 24-89 85-140 (152)
79 3ha9_A Uncharacterized thiored 98.6 3.5E-07 1.2E-11 60.4 8.1 66 4-89 97-163 (165)
80 3fkf_A Thiol-disulfide oxidore 98.5 3E-07 1E-11 59.1 7.4 62 7-89 81-145 (148)
81 3or5_A Thiol:disulfide interch 98.5 4.8E-07 1.6E-11 59.3 8.5 72 5-89 79-150 (165)
82 4fo5_A Thioredoxin-like protei 98.5 2.9E-07 9.8E-12 59.6 6.9 61 6-87 78-142 (143)
83 3me7_A Putative uncharacterize 98.5 9.4E-07 3.2E-11 59.6 8.2 80 4-91 77-163 (170)
84 2ls5_A Uncharacterized protein 97.8 2.4E-08 8.1E-13 65.8 0.0 58 24-87 91-148 (159)
85 2b7k_A SCO1 protein; metalloch 98.4 3E-07 1E-11 63.5 5.5 79 4-90 92-183 (200)
86 2lja_A Putative thiol-disulfid 98.4 5.1E-07 1.7E-11 58.6 6.2 68 7-92 77-145 (152)
87 3eur_A Uncharacterized protein 98.4 1.3E-06 4.6E-11 56.3 7.4 50 24-86 90-141 (142)
88 2lrt_A Uncharacterized protein 98.4 6.4E-07 2.2E-11 59.0 5.6 53 24-86 89-144 (152)
89 2vup_A Glutathione peroxidase- 98.3 1.2E-06 4E-11 59.8 6.7 68 4-89 99-184 (190)
90 2p5q_A Glutathione peroxidase 98.3 6.5E-07 2.2E-11 59.1 5.1 69 5-88 84-166 (170)
91 2obi_A PHGPX, GPX-4, phospholi 98.3 5.8E-07 2E-11 60.8 4.7 72 5-88 99-182 (183)
92 2p31_A CL683, glutathione pero 98.3 8.4E-07 2.9E-11 60.1 4.8 66 5-88 101-179 (181)
93 2i3y_A Epididymal secretory gl 98.3 1.1E-06 3.6E-11 62.3 5.5 80 5-90 107-211 (215)
94 3cmi_A Peroxiredoxin HYR1; thi 98.3 6E-07 2E-11 60.0 3.7 65 6-88 84-166 (171)
95 2r37_A Glutathione peroxidase 98.3 1.3E-06 4.4E-11 61.3 5.4 79 5-89 89-192 (207)
96 2gs3_A PHGPX, GPX-4, phospholi 98.2 1E-06 3.5E-11 59.9 4.5 71 5-87 101-183 (185)
97 2v1m_A Glutathione peroxidase; 98.2 3E-06 1E-10 55.8 6.4 71 5-88 83-165 (169)
98 3dwv_A Glutathione peroxidase- 98.1 2.1E-06 7.3E-11 58.4 4.3 58 24-89 110-182 (187)
99 3kij_A Probable glutathione pe 98.1 3.3E-06 1.1E-10 57.0 4.3 77 4-89 89-173 (180)
100 2f8a_A Glutathione peroxidase 98.0 5.1E-06 1.7E-10 58.1 4.9 33 52-88 173-205 (208)
101 4hde_A SCO1/SENC family lipopr 97.9 0.00012 4E-09 49.3 9.8 79 4-89 82-169 (170)
102 2lus_A Thioredoxion; CR-Trp16, 96.9 4E-06 1.4E-10 53.6 0.0 38 27-70 90-127 (143)
103 2ju5_A Thioredoxin disulfide i 97.7 4.1E-05 1.4E-09 50.6 4.5 49 32-89 103-151 (154)
104 2l57_A Uncharacterized protein 97.5 0.00025 8.5E-09 44.6 5.4 56 24-89 58-116 (126)
105 2kuc_A Putative disulphide-iso 97.4 0.00031 1.1E-08 44.2 5.6 47 33-89 74-120 (130)
106 1i5g_A Tryparedoxin II; electr 97.3 0.00011 3.7E-09 47.2 2.5 39 25-69 87-127 (144)
107 2fwh_A Thiol:disulfide interch 97.2 0.00011 3.8E-09 47.1 1.9 50 32-91 78-129 (134)
108 3fk8_A Disulphide isomerase; A 97.2 0.0006 2.1E-08 43.2 5.2 55 32-89 75-132 (133)
109 1o8x_A Tryparedoxin, TRYX, TXN 97.2 0.00018 6.1E-09 46.3 2.6 39 25-69 87-127 (146)
110 1o73_A Tryparedoxin; electron 97.1 0.00029 9.9E-09 44.9 2.5 39 25-69 87-127 (144)
111 2l5l_A Thioredoxin; structural 96.9 0.0024 8.3E-08 40.7 6.1 55 24-89 70-125 (136)
112 3s9f_A Tryparedoxin; thioredox 96.9 0.00053 1.8E-08 45.5 2.5 38 26-69 108-147 (165)
113 3hxs_A Thioredoxin, TRXP; elec 96.6 0.005 1.7E-07 39.1 5.6 55 24-89 83-138 (141)
114 2voc_A Thioredoxin; electron t 96.6 0.0047 1.6E-07 37.9 5.2 55 24-89 49-104 (112)
115 2i4a_A Thioredoxin; acidophIle 96.4 0.0078 2.7E-07 36.0 5.3 54 24-88 52-106 (107)
116 3f9u_A Putative exported cytoc 96.3 0.0012 4.2E-08 43.6 1.6 42 38-88 123-164 (172)
117 2trx_A Thioredoxin; electron t 96.3 0.0089 3.1E-07 35.9 5.2 54 24-88 52-106 (108)
118 1nsw_A Thioredoxin, TRX; therm 96.3 0.0066 2.3E-07 36.3 4.6 53 25-88 50-103 (105)
119 2qgv_A Hydrogenase-1 operon pr 96.3 0.0057 2E-07 40.7 4.5 54 25-89 70-124 (140)
120 2es7_A Q8ZP25_salty, putative 96.2 0.0042 1.4E-07 40.8 3.7 48 31-89 77-124 (142)
121 1thx_A Thioredoxin, thioredoxi 96.2 0.0099 3.4E-07 35.9 5.2 55 24-89 57-112 (115)
122 1oaz_A Thioredoxin 1; immune s 96.2 0.0096 3.3E-07 37.5 5.2 47 31-88 75-121 (123)
123 2pu9_C TRX-F, thioredoxin F-ty 96.2 0.012 4.3E-07 35.6 5.5 53 24-88 55-109 (111)
124 3tco_A Thioredoxin (TRXA-1); d 96.2 0.012 4E-07 35.2 5.2 54 24-88 53-107 (109)
125 1w4v_A Thioredoxin, mitochondr 96.1 0.011 3.8E-07 36.6 5.2 54 24-88 63-117 (119)
126 1dby_A Chloroplast thioredoxin 96.1 0.017 5.9E-07 34.5 6.0 53 25-88 52-105 (107)
127 2yzu_A Thioredoxin; redox prot 96.1 0.013 4.4E-07 34.9 5.3 55 24-89 50-105 (109)
128 2e0q_A Thioredoxin; electron t 96.1 0.013 4.6E-07 34.4 5.3 53 25-88 48-101 (104)
129 2o8v_B Thioredoxin 1; disulfid 96.0 0.011 3.8E-07 37.4 4.8 54 24-88 72-126 (128)
130 2dlx_A UBX domain-containing p 95.9 0.02 6.8E-07 38.3 5.9 58 35-103 91-151 (153)
131 3die_A Thioredoxin, TRX; elect 95.9 0.021 7.1E-07 33.9 5.5 53 25-88 52-105 (106)
132 2l6c_A Thioredoxin; oxidoreduc 95.9 0.02 7E-07 34.9 5.5 55 24-89 50-105 (110)
133 4euy_A Uncharacterized protein 95.7 0.023 7.9E-07 34.2 5.2 54 24-88 49-103 (105)
134 3emx_A Thioredoxin; structural 95.7 0.011 3.8E-07 37.6 3.8 48 32-90 79-126 (135)
135 3ul3_B Thioredoxin, thioredoxi 95.6 0.02 6.7E-07 35.9 4.7 46 31-87 82-127 (128)
136 3zzx_A Thioredoxin; oxidoreduc 95.5 0.026 8.9E-07 34.9 5.0 52 24-87 51-103 (105)
137 1t00_A Thioredoxin, TRX; redox 95.5 0.025 8.4E-07 34.2 4.7 54 24-88 55-109 (112)
138 1sen_A Thioredoxin-like protei 95.5 0.014 4.6E-07 38.7 3.7 61 25-89 79-147 (164)
139 2lst_A Thioredoxin; structural 94.4 0.0025 8.4E-08 40.0 0.0 47 33-89 66-115 (130)
140 1faa_A Thioredoxin F; electron 95.4 0.026 9E-07 34.8 4.7 53 24-88 68-122 (124)
141 1x5e_A Thioredoxin domain cont 95.4 0.035 1.2E-06 34.4 5.3 54 24-89 55-109 (126)
142 3qfa_C Thioredoxin; protein-pr 95.4 0.048 1.6E-06 33.6 5.8 53 24-88 62-115 (116)
143 1fb6_A Thioredoxin M; electron 95.4 0.044 1.5E-06 32.4 5.5 53 25-88 51-104 (105)
144 1x5d_A Protein disulfide-isome 95.3 0.035 1.2E-06 34.4 5.2 54 25-89 62-116 (133)
145 2ppt_A Thioredoxin-2; thiredox 95.3 0.034 1.2E-06 36.4 5.3 55 24-89 96-151 (155)
146 3gnj_A Thioredoxin domain prot 95.3 0.04 1.4E-06 33.0 5.3 54 24-88 54-108 (111)
147 1ep7_A Thioredoxin CH1, H-type 95.3 0.032 1.1E-06 33.6 4.7 53 24-88 56-109 (112)
148 3f3q_A Thioredoxin-1; His TAG, 95.2 0.052 1.8E-06 33.0 5.6 53 24-88 55-108 (109)
149 2dj1_A Protein disulfide-isome 95.1 0.046 1.6E-06 34.3 5.3 53 25-89 70-123 (140)
150 1v98_A Thioredoxin; oxidoreduc 95.1 0.045 1.5E-06 34.7 5.2 55 24-89 82-137 (140)
151 2wz9_A Glutaredoxin-3; protein 95.0 0.047 1.6E-06 35.3 5.3 54 24-89 63-117 (153)
152 2dml_A Protein disulfide-isome 95.0 0.026 8.9E-07 35.1 3.9 54 25-88 68-122 (130)
153 3p2a_A Thioredoxin 2, putative 95.0 0.044 1.5E-06 35.0 4.9 55 24-89 87-142 (148)
154 3cxg_A Putative thioredoxin; m 94.9 0.047 1.6E-06 34.6 5.0 48 31-89 78-128 (133)
155 2qsi_A Putative hydrogenase ex 94.9 0.044 1.5E-06 36.2 4.9 55 24-89 67-122 (137)
156 1xwb_A Thioredoxin; dimerizati 94.9 0.049 1.7E-06 32.2 4.8 53 24-88 52-105 (106)
157 1xfl_A Thioredoxin H1; AT3G510 94.8 0.058 2E-06 33.7 5.1 53 24-88 69-122 (124)
158 3d22_A TRXH4, thioredoxin H-ty 94.8 0.051 1.7E-06 34.2 4.9 54 24-89 77-131 (139)
159 3uvt_A Thioredoxin domain-cont 94.8 0.06 2.1E-06 32.1 5.0 53 24-87 56-109 (111)
160 2oe3_A Thioredoxin-3; electron 94.5 0.078 2.7E-06 32.6 5.1 51 25-87 62-113 (114)
161 3m9j_A Thioredoxin; oxidoreduc 94.5 0.086 2.9E-06 31.1 5.1 52 24-87 51-103 (105)
162 1syr_A Thioredoxin; SGPP, stru 94.4 0.073 2.5E-06 32.2 4.8 53 24-88 57-110 (112)
163 3gix_A Thioredoxin-like protei 94.4 0.043 1.5E-06 35.7 3.9 53 31-90 63-121 (149)
164 3hz4_A Thioredoxin; NYSGXRC, P 94.4 0.084 2.9E-06 33.5 5.2 54 25-89 57-111 (140)
165 2vim_A Thioredoxin, TRX; thior 94.4 0.1 3.5E-06 30.7 5.3 53 24-88 50-103 (104)
166 2xc2_A Thioredoxinn; oxidoredu 94.4 0.089 3.1E-06 32.0 5.1 53 24-88 63-116 (117)
167 2i1u_A Thioredoxin, TRX, MPT46 94.3 0.068 2.3E-06 32.5 4.4 54 24-88 62-116 (121)
168 2vlu_A Thioredoxin, thioredoxi 94.2 0.098 3.4E-06 31.9 5.1 53 24-88 65-118 (122)
169 2j23_A Thioredoxin; immune pro 94.2 0.096 3.3E-06 32.4 5.0 52 25-88 67-119 (121)
170 1r26_A Thioredoxin; redox-acti 94.1 0.1 3.6E-06 32.7 5.1 54 24-89 68-122 (125)
171 2vm1_A Thioredoxin, thioredoxi 93.9 0.13 4.5E-06 30.9 5.2 54 24-89 59-113 (118)
172 3d6i_A Monothiol glutaredoxin- 93.9 0.12 4E-06 31.1 4.9 54 24-89 54-108 (112)
173 1ti3_A Thioredoxin H, PTTRXH1; 93.7 0.064 2.2E-06 32.2 3.4 53 24-88 57-110 (113)
174 1gh2_A Thioredoxin-like protei 93.7 0.15 5.1E-06 30.4 5.1 52 24-87 52-104 (107)
175 2f51_A Thioredoxin; electron t 93.6 0.082 2.8E-06 32.7 3.8 56 24-90 54-113 (118)
176 2yj7_A LPBCA thioredoxin; oxid 92.6 0.013 4.6E-07 34.6 0.0 46 31-87 59-104 (106)
177 3ira_A Conserved protein; meth 93.5 0.24 8.1E-06 33.6 6.3 50 33-88 84-145 (173)
178 3ph9_A Anterior gradient prote 93.4 0.03 1E-06 37.2 1.6 48 35-88 90-143 (151)
179 1nho_A Probable thioredoxin; b 93.3 0.16 5.5E-06 28.7 4.5 50 24-88 33-83 (85)
180 3h79_A Thioredoxin-like protei 93.3 0.084 2.9E-06 32.8 3.5 54 25-88 71-126 (127)
181 2dbc_A PDCL2, unnamed protein 93.2 0.21 7.2E-06 31.6 5.4 58 39-103 74-134 (135)
182 3apq_A DNAJ homolog subfamily 93.0 0.11 3.8E-06 35.3 4.1 55 24-89 146-201 (210)
183 1zma_A Bacterocin transport ac 92.8 0.094 3.2E-06 32.0 3.2 41 35-86 77-117 (118)
184 1mek_A Protein disulfide isome 92.8 0.067 2.3E-06 32.2 2.4 54 25-89 60-116 (120)
185 3q6o_A Sulfhydryl oxidase 1; p 92.5 0.2 6.9E-06 34.7 4.9 57 23-89 183-239 (244)
186 3dxb_A Thioredoxin N-terminall 92.4 0.26 8.7E-06 33.8 5.3 54 25-89 63-117 (222)
187 1qgv_A Spliceosomal protein U5 91.9 0.4 1.4E-05 30.7 5.5 59 25-90 56-121 (142)
188 1a8l_A Protein disulfide oxido 91.8 0.26 8.8E-06 33.4 4.7 54 24-88 170-224 (226)
189 3qou_A Protein YBBN; thioredox 91.5 0.3 1E-05 34.3 5.0 52 25-87 59-111 (287)
190 3aps_A DNAJ homolog subfamily 90.9 0.091 3.1E-06 32.1 1.5 59 24-89 53-112 (122)
191 1fo5_A Thioredoxin; disulfide 90.6 0.19 6.4E-06 28.4 2.6 49 24-87 34-83 (85)
192 3dml_A Putative uncharacterize 89.6 0.57 2E-05 29.8 4.5 43 36-89 67-109 (116)
193 3t58_A Sulfhydryl oxidase 1; o 89.3 0.53 1.8E-05 37.0 5.0 58 24-91 184-241 (519)
194 3t58_A Sulfhydryl oxidase 1; o 89.1 0.77 2.6E-05 36.1 5.9 56 24-89 65-126 (519)
195 2dj3_A Protein disulfide-isome 86.6 0.4 1.4E-05 29.5 2.3 49 32-89 68-117 (133)
196 2av4_A Thioredoxin-like protei 84.4 1.4 4.8E-05 29.8 4.3 64 25-95 74-144 (160)
197 1v58_A Thiol:disulfide interch 84.3 0.95 3.2E-05 31.6 3.6 46 33-89 187-232 (241)
198 2djk_A PDI, protein disulfide- 83.6 2.6 9E-05 26.2 5.2 59 24-89 54-114 (133)
199 2hls_A Protein disulfide oxido 83.1 2 7E-05 29.9 4.9 51 24-89 174-225 (243)
200 1sji_A Calsequestrin 2, calseq 83.0 1.6 5.5E-05 31.8 4.5 52 25-88 68-120 (350)
201 1ilo_A Conserved hypothetical 82.5 1.4 4.8E-05 24.2 3.2 38 34-85 39-76 (77)
202 3idv_A Protein disulfide-isome 81.9 1.7 6E-05 29.2 4.1 52 25-88 183-235 (241)
203 1z6n_A Hypothetical protein PA 80.9 1.2 4.2E-05 29.6 3.0 43 24-69 85-128 (167)
204 1wmj_A Thioredoxin H-type; str 80.7 0.49 1.7E-05 28.8 0.9 53 24-88 67-120 (130)
205 3idv_A Protein disulfide-isome 80.1 1.9 6.4E-05 29.0 3.8 53 25-89 68-121 (241)
206 2dj0_A Thioredoxin-related tra 79.9 2.8 9.7E-05 25.9 4.3 48 25-73 60-108 (137)
207 2k9k_A TONB2; metal transport; 79.5 3.8 0.00013 24.9 4.7 40 49-89 40-80 (106)
208 3q6o_A Sulfhydryl oxidase 1; p 79.3 3.1 0.00011 28.5 4.7 55 25-89 66-126 (244)
209 1ttz_A Conserved hypothetical 79.3 3.3 0.00011 24.5 4.3 43 31-89 34-76 (87)
210 2r2j_A Thioredoxin domain-cont 78.0 2.3 7.8E-05 31.4 3.9 54 25-89 61-116 (382)
211 3kp8_A Vkorc1/thioredoxin doma 77.5 4.4 0.00015 24.5 4.6 37 33-85 54-90 (106)
212 2ywm_A Glutaredoxin-like prote 77.0 2.6 8.8E-05 28.4 3.7 52 24-89 167-219 (229)
213 1u07_A TONB protein; beta-hair 76.9 4.2 0.00015 23.9 4.3 48 37-89 17-65 (90)
214 3f8u_A Protein disulfide-isome 76.1 2.6 9.1E-05 31.8 3.9 53 25-88 54-107 (481)
215 3iv4_A Putative oxidoreductase 75.2 4 0.00014 25.8 4.0 52 24-84 54-110 (112)
216 2znm_A Thiol:disulfide interch 74.3 2.3 7.9E-05 27.9 2.8 53 34-101 139-193 (195)
217 3us3_A Calsequestrin-1; calciu 72.8 3.6 0.00012 30.3 3.8 52 25-88 70-122 (367)
218 2djj_A PDI, protein disulfide- 69.4 2.3 7.9E-05 25.4 1.8 34 51-88 81-115 (121)
219 2d9v_A Pleckstrin homology dom 68.7 13 0.00045 23.0 5.4 47 53-105 79-127 (130)
220 2b5e_A Protein disulfide-isome 68.0 4.5 0.00015 30.7 3.5 53 25-88 65-120 (504)
221 2ywm_A Glutaredoxin-like prote 67.5 5.5 0.00019 26.7 3.6 41 24-71 59-100 (229)
222 3ed3_A Protein disulfide-isome 66.4 11 0.00038 27.0 5.2 57 25-88 68-140 (298)
223 3f8u_A Protein disulfide-isome 66.1 4.5 0.00015 30.5 3.2 54 25-88 405-459 (481)
224 2grx_C Protein TONB; beta barr 66.1 7 0.00024 27.8 4.0 39 51-89 165-204 (229)
225 3apo_A DNAJ homolog subfamily 66.1 7.2 0.00025 31.3 4.5 54 24-89 487-541 (780)
226 3apo_A DNAJ homolog subfamily 64.4 2 6.7E-05 34.7 0.9 59 24-89 707-766 (780)
227 2trc_P Phosducin, MEKA, PP33; 62.8 5.4 0.00019 27.4 2.8 57 24-88 151-211 (217)
228 1a0r_P Phosducin, MEKA, PP33; 60.5 10 0.00034 26.8 4.0 48 35-89 175-225 (245)
229 2k8s_A Thioredoxin; dimer, str 60.5 8.3 0.00028 21.5 2.9 35 24-67 30-68 (80)
230 1wou_A Thioredoxin -related pr 58.8 6.3 0.00021 23.9 2.4 43 32-86 79-121 (123)
231 3evi_A Phosducin-like protein 58.7 25 0.00084 21.6 5.2 43 38-87 66-111 (118)
232 4fu0_A D-alanine--D-alanine li 56.0 32 0.0011 25.0 6.2 32 36-72 285-316 (357)
233 3uem_A Protein disulfide-isome 54.9 8.5 0.00029 27.7 2.8 48 31-88 307-355 (361)
234 4hi4_A Aerotaxis transducer AE 51.3 10 0.00035 22.3 2.4 16 53-68 16-31 (121)
235 3a0s_A Sensor protein; PAS-fol 50.4 12 0.00039 19.5 2.3 15 54-68 4-18 (96)
236 1lr0_A TOLA protein; domain-sw 50.1 25 0.00084 22.4 4.2 39 49-87 51-90 (129)
237 3b33_A Sensor protein; structu 49.5 14 0.00046 20.9 2.7 17 53-69 18-34 (115)
238 2qc7_A ERP31, ERP28, endoplasm 48.6 19 0.00064 25.3 3.7 46 34-88 70-117 (240)
239 1eej_A Thiol:disulfide interch 48.2 13 0.00043 25.1 2.7 44 31-89 167-210 (216)
240 3ga4_A Dolichyl-diphosphooligo 47.1 20 0.00069 24.1 3.6 57 24-87 81-150 (178)
241 2fgx_A Putative thioredoxin; N 46.2 35 0.0012 20.9 4.3 48 24-85 58-106 (107)
242 3gyk_A 27KDA outer membrane pr 43.6 27 0.00094 22.1 3.7 40 33-88 132-171 (175)
243 2rem_A Disulfide oxidoreductas 43.4 20 0.00069 23.1 3.1 39 35-89 145-183 (193)
244 1pls_A Pleckstrin homology dom 43.3 42 0.0014 19.6 4.3 37 53-95 66-103 (113)
245 3fg8_A Uncharacterized protein 43.1 19 0.00065 20.8 2.7 17 53-69 23-39 (118)
246 1w63_Q Adapter-related protein 42.5 35 0.0012 22.2 4.2 20 52-71 2-21 (158)
247 3olo_A Two-component sensor hi 42.3 20 0.00069 19.9 2.6 16 53-68 24-39 (118)
248 3gv1_A Disulfide interchange p 41.2 19 0.00065 23.1 2.6 41 33-88 97-137 (147)
249 4dvc_A Thiol:disulfide interch 41.0 39 0.0013 21.3 4.1 41 36-89 141-181 (184)
250 3mfx_A Sensory BOX/ggdef famil 40.9 18 0.0006 22.2 2.3 17 53-69 18-34 (129)
251 3fc7_A HTR-like protein, senso 40.3 19 0.00066 20.3 2.3 16 53-68 30-45 (125)
252 2gj3_A Nitrogen fixation regul 40.3 22 0.00077 20.3 2.7 15 54-68 17-31 (120)
253 2in3_A Hypothetical protein; D 40.2 51 0.0017 21.5 4.8 33 52-89 177-209 (216)
254 3cwf_A Alkaline phosphatase sy 40.1 15 0.00053 22.2 2.0 15 54-68 50-64 (122)
255 1ll8_A PAS kinase; PAS domain, 39.8 20 0.00069 20.3 2.4 15 54-68 10-25 (114)
256 2ec4_A FAS-associated factor 1 39.0 83 0.0028 20.8 6.0 33 51-87 130-165 (178)
257 2vv6_A FIXL, sensor protein FI 38.7 21 0.00071 20.4 2.3 16 54-69 5-20 (119)
258 2qkp_A Uncharacterized protein 38.6 20 0.00067 22.9 2.3 18 53-70 30-47 (151)
259 3ihg_A RDME; flavoenzyme, anth 38.4 46 0.0016 25.3 4.8 34 30-70 483-516 (535)
260 2lqo_A Putative glutaredoxin R 36.8 65 0.0022 18.9 6.9 54 24-89 28-83 (92)
261 2r78_A Sensor protein; sensory 36.6 27 0.00092 20.1 2.6 15 54-68 23-37 (117)
262 1t3b_A Thiol:disulfide interch 36.5 32 0.0011 23.1 3.3 41 33-88 169-209 (211)
263 2vgl_S AP-2 complex subunit si 36.1 46 0.0016 21.1 3.9 20 52-71 2-21 (142)
264 2c0g_A ERP29 homolog, windbeut 34.4 67 0.0023 22.5 4.8 57 24-88 66-130 (248)
265 3mxq_A Sensor protein; PSI2, M 34.0 25 0.00087 22.5 2.3 17 53-69 33-49 (152)
266 1hyu_A AHPF, alkyl hydroperoxi 33.4 53 0.0018 25.1 4.4 50 24-88 148-198 (521)
267 3bwl_A Sensor protein; structu 33.2 34 0.0012 19.4 2.7 15 54-68 29-43 (126)
268 1d06_A Nitrogen fixation regul 33.1 29 0.00098 20.2 2.3 17 53-69 27-43 (130)
269 1wjk_A C330018D20RIK protein; 32.6 75 0.0026 18.4 4.9 50 24-89 43-95 (100)
270 3kzq_A Putative uncharacterize 32.6 35 0.0012 22.5 2.9 32 54-89 171-202 (208)
271 1z6m_A Conserved hypothetical 32.1 61 0.0021 20.4 4.0 37 34-86 138-174 (175)
272 3qcp_A QSOX from trypanosoma b 31.9 17 0.00057 28.4 1.3 33 25-63 83-116 (470)
273 3luq_A Sensor protein; PAS, hi 31.8 33 0.0011 18.6 2.4 15 54-68 15-29 (114)
274 2v2f_A Penicillin binding prot 31.5 25 0.00084 15.8 1.4 16 53-68 5-20 (26)
275 3u3g_D Ribonuclease H, RNAse H 31.0 41 0.0014 20.4 2.9 42 54-95 22-64 (140)
276 3h93_A Thiol:disulfide interch 30.9 45 0.0015 21.5 3.2 41 36-89 143-183 (192)
277 3vol_A Aerotaxis transducer AE 30.9 29 0.001 23.4 2.3 16 53-68 33-48 (233)
278 3mjq_A Uncharacterized protein 30.4 35 0.0012 19.0 2.3 15 54-68 11-25 (126)
279 1kcq_A Gelsolin, brevin, ADF, 30.1 60 0.0021 19.4 3.5 22 50-72 26-47 (104)
280 3t12_B Gliding protein MGLB; G 29.8 54 0.0018 21.1 3.4 18 52-69 26-43 (136)
281 3lyx_A Sensory BOX/ggdef domai 29.2 39 0.0013 18.1 2.4 16 53-68 18-33 (124)
282 2vlg_A Sporulation kinase A; h 28.7 43 0.0015 19.8 2.6 16 54-69 11-26 (111)
283 4gym_A Glyoxalase/bleomycin re 28.2 58 0.002 19.7 3.3 18 52-69 115-132 (149)
284 3fcd_A Lyase, ORF125EGC139; la 28.2 88 0.003 18.6 4.1 19 52-70 106-124 (134)
285 2h8l_A Protein disulfide-isome 27.9 1.1E+02 0.0038 20.7 5.0 58 25-89 169-229 (252)
286 2e7p_A Glutaredoxin; thioredox 27.9 20 0.00068 21.0 0.9 24 36-68 64-87 (116)
287 3kp9_A Vkorc1/thioredoxin doma 27.8 65 0.0022 23.3 3.8 37 34-86 240-276 (291)
288 4ann_A ESSB; membrane protein, 26.9 43 0.0015 23.3 2.6 39 51-89 105-147 (215)
289 3qyh_A CO-type nitrIle hydrata 26.9 31 0.0011 24.5 1.8 68 29-102 154-222 (226)
290 2e5i_A Heterogeneous nuclear r 25.5 73 0.0025 19.8 3.4 31 53-89 53-83 (124)
291 1nwz_A PYP, photoactive yellow 25.2 42 0.0014 21.3 2.2 16 54-69 29-44 (125)
292 3sk2_A EHPR; antibiotic resist 24.5 70 0.0024 18.9 3.1 17 53-69 114-130 (132)
293 3fv6_A YQZB protein; CBS domai 24.3 72 0.0024 19.7 3.2 38 52-97 114-154 (159)
294 2p25_A Glyoxalase family prote 24.2 74 0.0025 18.1 3.1 16 52-67 109-124 (126)
295 3ktb_A Arsenical resistance op 24.2 83 0.0028 19.5 3.4 59 8-85 35-101 (106)
296 3by9_A Sensor protein; histidi 24.1 49 0.0017 21.9 2.5 16 52-67 163-178 (260)
297 1sk4_A Peptidoglycan recogniti 23.8 33 0.0011 22.4 1.5 15 52-66 62-76 (163)
298 2a4x_A Mitomycin-binding prote 23.7 1E+02 0.0035 18.2 3.8 19 52-70 110-128 (138)
299 3c8c_A Methyl-accepting chemot 23.5 40 0.0014 21.7 1.9 15 53-67 160-174 (240)
300 3f4s_A Alpha-DSBA1, putative u 23.5 68 0.0023 21.9 3.2 45 36-89 161-210 (226)
301 1qto_A Bleomycin-binding prote 23.4 75 0.0026 18.5 3.1 16 53-68 104-119 (122)
302 1mzu_A PPR; photoactive yellow 23.4 48 0.0016 21.2 2.2 16 54-69 34-49 (129)
303 2jhe_A Transcription regulator 23.2 53 0.0018 20.5 2.4 16 53-68 91-106 (190)
304 4dah_A Sporulation kinase D; a 23.2 47 0.0016 21.6 2.2 17 53-69 163-179 (217)
305 4g6x_A Glyoxalase/bleomycin re 22.8 73 0.0025 19.6 3.0 17 52-68 133-149 (155)
306 2zyz_A Putative uncharacterize 22.7 83 0.0028 19.8 3.2 25 53-77 85-110 (116)
307 1xrk_A Bleomycin resistance pr 22.6 82 0.0028 18.4 3.1 17 53-69 104-120 (124)
308 4gqw_A CBS domain-containing p 22.4 1.3E+02 0.0044 17.8 4.1 31 52-90 116-146 (152)
309 2aa4_A Mannac kinase, putative 22.3 1.9E+02 0.0065 19.7 5.4 34 54-87 14-47 (289)
310 1lba_A T7 lysozyme; hydrolase( 22.0 48 0.0016 21.2 2.0 15 52-66 40-54 (146)
311 1xqa_A Glyoxalase/bleomycin re 21.8 66 0.0023 18.2 2.5 16 52-67 96-111 (113)
312 3kol_A Oxidoreductase, glyoxal 21.6 1.1E+02 0.0036 18.2 3.6 19 52-70 133-151 (156)
313 3f1p_A Endothelial PAS domain- 21.6 75 0.0026 17.6 2.7 16 53-68 10-25 (117)
314 2w0n_A Sensor protein DCUS; si 21.5 16 0.00054 20.3 -0.4 14 54-67 27-40 (118)
315 3huh_A Virulence protein STM31 21.5 96 0.0033 18.7 3.4 18 53-70 126-143 (152)
316 2f2l_A Peptidoglycan-recogniti 21.5 39 0.0013 22.3 1.5 14 52-65 63-76 (167)
317 3l7t_A SMU.1112C, putative unc 21.3 91 0.0031 17.8 3.1 16 52-67 117-132 (134)
318 3hd5_A Thiol:disulfide interch 21.2 1.1E+02 0.0037 19.6 3.7 12 79-90 173-184 (195)
319 3e5d_A Putative glyoxalase I; 21.2 88 0.003 17.8 3.0 16 52-67 110-125 (127)
320 2pjs_A AGR_C_3564P, uncharacte 21.2 90 0.0031 17.7 3.1 17 52-68 100-116 (119)
321 3f1p_B ARYL hydrocarbon recept 21.1 75 0.0026 17.8 2.6 17 52-68 12-28 (121)
322 3lic_A Sensor protein; PDC fol 21.1 55 0.0019 21.9 2.2 13 54-66 182-194 (274)
323 2rkq_A Peptidoglycan-recogniti 21.1 41 0.0014 22.1 1.5 15 52-66 65-79 (169)
324 4eet_B Phototropin-2; LOV, blu 21.0 70 0.0024 17.1 2.4 15 54-68 9-26 (115)
325 3kgk_A Arsenical resistance op 21.0 82 0.0028 19.7 2.9 60 8-86 32-99 (110)
326 2rk0_A Glyoxalase/bleomycin re 21.0 91 0.0031 18.4 3.1 17 53-69 110-126 (136)
327 3m7a_A Uncharacterized protein 21.0 79 0.0027 20.5 2.9 16 54-69 85-100 (140)
328 1f9z_A Glyoxalase I; beta-alph 20.8 91 0.0031 18.0 3.1 17 53-69 109-125 (135)
329 2rbb_A Glyoxalase/bleomycin re 20.7 90 0.0031 18.6 3.1 18 52-69 114-131 (141)
330 1ecs_A Bleomycin resistance pr 20.7 92 0.0031 18.2 3.1 18 52-69 101-118 (126)
331 3feu_A Putative lipoprotein; a 20.6 1E+02 0.0035 20.0 3.5 13 77-89 171-183 (185)
332 1yck_A Peptidoglycan recogniti 20.5 42 0.0014 22.3 1.5 15 52-66 72-86 (175)
333 2dhk_A TBC1 domain family memb 20.4 1.1E+02 0.0038 18.1 3.4 34 53-92 70-103 (119)
334 2xz4_A Peptidoglycan-recogniti 20.4 42 0.0015 22.3 1.5 15 52-66 71-85 (180)
335 2cb3_A Peptidoglycan-recogniti 20.4 43 0.0015 22.2 1.5 15 52-66 68-82 (175)
336 2qqz_A Glyoxalase family prote 20.3 95 0.0033 17.9 3.1 17 52-68 106-122 (126)
337 2p7o_A Glyoxalase family prote 20.3 1.3E+02 0.0043 17.4 3.7 19 52-70 104-122 (133)
338 1tvf_A PBP4, penicillin bindin 20.2 2E+02 0.0069 21.3 5.4 53 36-88 19-72 (369)
339 3ey7_A Biphenyl-2,3-DIOL 1,2-d 20.1 99 0.0034 17.7 3.1 17 53-69 113-129 (133)
340 3r6a_A Uncharacterized protein 20.1 92 0.0031 19.1 3.1 17 53-69 101-117 (144)
341 3ghj_A Putative integron gene 20.1 96 0.0033 18.7 3.1 17 52-68 123-139 (141)
342 2xz8_A Peptidoglycan-recogniti 20.0 45 0.0015 21.9 1.5 14 52-65 70-83 (150)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.8e-26 Score=163.49 Aligned_cols=97 Identities=52% Similarity=0.859 Sum_probs=88.0
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
.+++|++|++.. +..+++.+++||||||++++++++||++.++.|++.|+|||||++|+|+++++++.+.+||++|+|+
T Consensus 96 s~~sh~aw~~~~-~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr 174 (216)
T 3sbc_A 96 SEYSLLAWTNIP-RKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALR 174 (216)
T ss_dssp CHHHHHHHHTSC-GGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred chhhHHHHHHHH-HHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHH
Confidence 468999999653 3335677899999999999999999999888899999999999999999999999999999999999
Q ss_pred HHHhhhhhhhcCCcccCC
Q psy13875 84 LVKAFQFVDKHGEGSKRV 101 (105)
Q Consensus 84 ~l~~l~~~~~~~~~~~~~ 101 (105)
.|++||..+++|++||+-
T Consensus 175 ~l~AlQ~~~~~~~~~Pa~ 192 (216)
T 3sbc_A 175 LVEAFQWTDKNGTVLPCN 192 (216)
T ss_dssp HHHHHHHHHHHCCBBCTT
T ss_pred HHHHhhhHhhcCCCcCCC
Confidence 999999999999999874
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.92 E-value=4.4e-25 Score=159.20 Aligned_cols=96 Identities=59% Similarity=0.938 Sum_probs=81.2
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
-+++|++|+++... .+++.+++||||||++++|+++||++.+..|++.|+|||||++|+|+++++++...+||++|+|+
T Consensus 100 s~~sh~~w~~~~~~-~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr 178 (219)
T 3tue_A 100 SEYAHLQWTLQDRK-KGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLR 178 (219)
T ss_dssp CHHHHHHHHHSCGG-GTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHH
T ss_pred chhhHHHHhhhhHH-hcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHH
Confidence 36899999965332 24556899999999999999999999887899999999999999999999989999999999999
Q ss_pred HHHhhhhhhhcCCcccC
Q psy13875 84 LVKAFQFVDKHGEGSKR 100 (105)
Q Consensus 84 ~l~~l~~~~~~~~~~~~ 100 (105)
.|++||..+++|++||+
T Consensus 179 ~l~aLQ~~~~~~~~~Pa 195 (219)
T 3tue_A 179 LLEAFQFVEKHGEVCPA 195 (219)
T ss_dssp HHHHHHHHHHC------
T ss_pred HHHHhhhHHhcCCCcCC
Confidence 99999999999999986
No 3
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.75 E-value=7.5e-18 Score=123.04 Aligned_cols=94 Identities=29% Similarity=0.535 Sum_probs=82.1
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCc-cceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGI-PLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~-~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
.++|++|++..... .+. +++||+++|.+++++++||+..+..|. +.|++||||++|+|+++++++.+.+++.+++++
T Consensus 78 ~~~~~~w~~~~~~~-~~~-~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr 155 (249)
T 3a2v_A 78 VFSHIKWKEWIERH-IGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILR 155 (249)
T ss_dssp HHHHHHHHHHHHHH-TCC-CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCC-CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHH
Confidence 57899999765332 223 789999999999999999998765565 789999999999999999998888899999999
Q ss_pred HHHhhhhhhhcCCcccC
Q psy13875 84 LVKAFQFVDKHGEGSKR 100 (105)
Q Consensus 84 ~l~~l~~~~~~~~~~~~ 100 (105)
.|++||..+++|++||+
T Consensus 156 ~I~alq~~~~~~~~~Pa 172 (249)
T 3a2v_A 156 IVKALKLGDSLKRAVPA 172 (249)
T ss_dssp HHHHHHHHHHHTCBBCT
T ss_pred HHHHHHhccccCccCCC
Confidence 99999999999999987
No 4
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.73 E-value=9e-18 Score=126.18 Aligned_cols=76 Identities=28% Similarity=0.301 Sum_probs=67.7
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
.+++|++|+++. +++||+|||++++++++||+... |.+.|+|||||++|+|+++|. .+....|++|+|+
T Consensus 64 ~~~~~~~f~~~~--------~l~fp~l~D~~~~v~~~ygv~~~--~~~~r~tfiId~~G~i~~~~~-~v~~~~h~~~~l~ 132 (322)
T 4eo3_A 64 SVEALKRFKEKN--------DLKVTLLSDPEGILHEFFNVLEN--GKTVRSTFLIDRWGFVRKEWR-RVKVEGHVQEVKE 132 (322)
T ss_dssp CHHHHHHHHHHH--------TCCSEEEECTTCHHHHHTTCEET--TEECCEEEEECTTSBEEEEEE-SCCSTTHHHHHHH
T ss_pred CHHHHHHHHHhh--------CCceEEEEcCchHHHHhcCCCCC--CcCccEEEEECCCCEEEEEEe-CCCccccHHHHHH
Confidence 468999999873 78999999999999999999843 667899999999999999997 4677889999999
Q ss_pred HHHhhhh
Q psy13875 84 LVKAFQF 90 (105)
Q Consensus 84 ~l~~l~~ 90 (105)
.|++++.
T Consensus 133 ~~~~~~~ 139 (322)
T 4eo3_A 133 ALDRLIE 139 (322)
T ss_dssp HHHHHHH
T ss_pred HHhhhch
Confidence 9999975
No 5
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.73 E-value=8.1e-18 Score=120.11 Aligned_cols=95 Identities=23% Similarity=0.432 Sum_probs=78.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCcccc----CC--ccceeEEEECCCCCEEEEEeccCCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIES----AG--IPLRGLFIIDTKGVLRQITVNDLPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~----~G--~~~ratfiID~~G~V~~~~~~~~~~~~~~ 78 (105)
.++|++|++++...-++ .+++||+++|.+++++++||+..+. .| .+.|++||||++|+|++++.++.+.+++.
T Consensus 76 ~~~~~~~~~~i~~~~~~-~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~ 154 (220)
T 1xcc_A 76 KESHDKWIEDIKYYGKL-NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNA 154 (220)
T ss_dssp HHHHHHHHHHHHHHHTC-SCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCH
T ss_pred HHHHHHHHHHHHHHhcC-CCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCH
Confidence 56899999754321001 3789999999999999999997542 12 46899999999999999999888778999
Q ss_pred HHHHHHHHhhhhhhhcCCcccC
Q psy13875 79 EEVLRLVKAFQFVDKHGEGSKR 100 (105)
Q Consensus 79 ~eil~~l~~l~~~~~~~~~~~~ 100 (105)
+++++.|++||..+++|++||+
T Consensus 155 ~ell~~i~~lq~~~~~~~~~p~ 176 (220)
T 1xcc_A 155 HEILRVLKSLQLTYTTPVATPV 176 (220)
T ss_dssp HHHHHHHHHHHHHHHSSEEBCT
T ss_pred HHHHHHHHHHHhhhcCCcccCC
Confidence 9999999999999999999984
No 6
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.72 E-value=2.4e-17 Score=117.92 Aligned_cols=95 Identities=22% Similarity=0.410 Sum_probs=79.7
Q ss_pred hHHHHHHHHhhhcCCCCC---CCCCceEEeeCcchHHhhhCCcccc----CC--ccceeEEEECCCCCEEEEEeccCCCC
Q psy13875 5 DEGDEVWLEDVKQGDGGL---GDLKYPLLADFKKEIATSYGVLIES----AG--IPLRGLFIIDTKGVLRQITVNDLPVG 75 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~---~~l~fpllsD~~~~vak~ygv~~~~----~G--~~~ratfiID~~G~V~~~~~~~~~~~ 75 (105)
.++|++|++++... .++ .+++||+++|.+++++++||+..+. .| ++.|++||||++|+|++++.++...+
T Consensus 76 ~~~~~~~~~~i~~~-~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~g 154 (224)
T 1prx_A 76 VEDHLAWSKDINAY-NSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTG 154 (224)
T ss_dssp HHHHHHHHHHHHHH-TTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBC
T ss_pred HHHHHHHHHHHHHh-hCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCC
Confidence 46899999864332 222 3789999999999999999997542 12 46899999999999999999888778
Q ss_pred CCHHHHHHHHHhhhhhhhcCCcccC
Q psy13875 76 RSVEEVLRLVKAFQFVDKHGEGSKR 100 (105)
Q Consensus 76 ~~~~eil~~l~~l~~~~~~~~~~~~ 100 (105)
++.+++++.|++||..++++++||+
T Consensus 155 r~~~eil~~i~~l~~~~~~~~~~p~ 179 (224)
T 1prx_A 155 RNFDEILRVVISLQLTAEKRVATPV 179 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHHCEEBCT
T ss_pred CCHHHHHHHHHHHHhhccCCcCCCC
Confidence 9999999999999999999999984
No 7
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.72 E-value=2.6e-17 Score=120.06 Aligned_cols=95 Identities=55% Similarity=0.976 Sum_probs=78.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
+++|++|+++..+ ++++.+++||+++|.+++++++||+..+..|++.|++||||++|+|+++++++...+++.+++++.
T Consensus 136 ~~~~~~~~~~~~~-~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~ 214 (254)
T 3tjj_A 136 QFTHLAWINTPRR-QGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRL 214 (254)
T ss_dssp HHHHHHHHTSCGG-GTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 5789999975322 244557899999999999999999987666778899999999999999999888888999999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..++++++|+.
T Consensus 215 L~alq~~~~~~~~cp~ 230 (254)
T 3tjj_A 215 VQAFQYTDKHGEVAPA 230 (254)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHhhccccccCccccC
Confidence 9999999999999875
No 8
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.71 E-value=2.4e-17 Score=119.05 Aligned_cols=95 Identities=27% Similarity=0.507 Sum_probs=78.5
Q ss_pred hHHHHHHHHhhhcCCCCCC-CCCceEEeeCcchHHhhhCCcccc----CC--ccceeEEEECCCCCEEEEEeccCCCCCC
Q psy13875 5 DEGDEVWLEDVKQGDGGLG-DLKYPLLADFKKEIATSYGVLIES----AG--IPLRGLFIIDTKGVLRQITVNDLPVGRS 77 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~-~l~fpllsD~~~~vak~ygv~~~~----~G--~~~ratfiID~~G~V~~~~~~~~~~~~~ 77 (105)
+++|++|++.+.... +.. +++||+++|.+++++++||+..+. .| ++.|++||||++|+|+++++++...+++
T Consensus 74 ~~~~~~~~~~i~~~~-~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~ 152 (233)
T 2v2g_A 74 VADHKEWSEDVKCLS-GVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRN 152 (233)
T ss_dssp HHHHHHHHHHHHHHH-TCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred HHHHHHHHHHHHHhh-CcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCC
Confidence 578999998542210 111 679999999999999999997532 12 4689999999999999999988878899
Q ss_pred HHHHHHHHHhhhhhhhcCCcccC
Q psy13875 78 VEEVLRLVKAFQFVDKHGEGSKR 100 (105)
Q Consensus 78 ~~eil~~l~~l~~~~~~~~~~~~ 100 (105)
.+++++.|++||..++++++||+
T Consensus 153 ~~eilr~l~~Lq~~~~~~~~~p~ 175 (233)
T 2v2g_A 153 FSEILRVIDSLQLTAQKKVATPA 175 (233)
T ss_dssp HHHHHHHHHHHHHHHHSSEEBCT
T ss_pred HHHHHHHHHHHHhhccCCccCCC
Confidence 99999999999999999999984
No 9
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.70 E-value=7.7e-17 Score=116.36 Aligned_cols=95 Identities=57% Similarity=0.957 Sum_probs=82.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++..+ .+++.+++||+++|.+++++++||+..+..|+..|++||||++|+|++++.++...+++.+++++.
T Consensus 122 ~~~~~~~~~~~~~-~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~ 200 (240)
T 3qpm_A 122 QFTHLAWIITPRK-QGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRL 200 (240)
T ss_dssp HHHHHHHHHSCGG-GTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 5688999976432 234457899999999999999999987666778899999999999999999888778899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..+++|++|+.
T Consensus 201 l~~lq~~~~~~~~cp~ 216 (240)
T 3qpm_A 201 VQAFQYTDKHGEVCPA 216 (240)
T ss_dssp HHHHHHHHHHSCBBCT
T ss_pred HHHhhhhhhcCCccCC
Confidence 9999999888988876
No 10
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.69 E-value=1.2e-16 Score=108.97 Aligned_cols=78 Identities=23% Similarity=0.381 Sum_probs=65.6
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccC----CccceeEEEECCCCCEEEEEeccCCC-CCCH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESA----GIPLRGLFIIDTKGVLRQITVNDLPV-GRSV 78 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~----G~~~ratfiID~~G~V~~~~~~~~~~-~~~~ 78 (105)
.++++++|+++ .+++||+|+|++++++++||+..+.. +++.|+|||||++|+|++++++.... .+++
T Consensus 77 ~~~~~~~~~~~--------~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~ 148 (164)
T 4gqc_A 77 SPWCLKKFKDE--------NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDY 148 (164)
T ss_dssp CHHHHHHHHHH--------TTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCH
T ss_pred CHHHHHHHHHh--------cCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCH
Confidence 36789999987 27899999999999999999976432 25689999999999999999976544 4589
Q ss_pred HHHHHHHHhhh
Q psy13875 79 EEVLRLVKAFQ 89 (105)
Q Consensus 79 ~eil~~l~~l~ 89 (105)
+++|+.|++|.
T Consensus 149 ~eil~~l~~l~ 159 (164)
T 4gqc_A 149 DEVVREANKIA 159 (164)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 11
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.67 E-value=3e-16 Score=105.92 Aligned_cols=77 Identities=26% Similarity=0.498 Sum_probs=64.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCC-----ccceeEEEECCCCCEEEEEeccCCC-CCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAG-----IPLRGLFIIDTKGVLRQITVNDLPV-GRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G-----~~~ratfiID~~G~V~~~~~~~~~~-~~~~ 78 (105)
++++++|+++. +++||+|+|.+++++++||+.....+ ++.|+|||||++|+|+++++++... ++++
T Consensus 75 ~~~~~~~~~~~--------~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~ 146 (157)
T 4g2e_A 75 PFSNKAFKEHN--------KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPY 146 (157)
T ss_dssp HHHHHHHHHHT--------TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCH
T ss_pred hhHHHHHHHHc--------CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCH
Confidence 67899999872 78999999999999999999764332 4689999999999999999986443 4689
Q ss_pred HHHHHHHHhhh
Q psy13875 79 EEVLRLVKAFQ 89 (105)
Q Consensus 79 ~eil~~l~~l~ 89 (105)
++++++|++|.
T Consensus 147 ~eil~~l~~Ls 157 (157)
T 4g2e_A 147 DEIEKVVKSLS 157 (157)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999873
No 12
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.67 E-value=4.1e-16 Score=107.84 Aligned_cols=92 Identities=25% Similarity=0.521 Sum_probs=78.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++. +++.+++||+++|.+++++++||+.....|+..|++||||++|+|++++.+....+++.+++++.
T Consensus 75 ~~~~~~~~~~~----~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~ 150 (186)
T 1n8j_A 75 HFTHKAWHSSS----ETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRK 150 (186)
T ss_dssp HHHHHHHHHHC----TTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHc----CcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 56789999773 23337899999999999999999986544666899999999999999999876667789999999
Q ss_pred HHhhhhhhhc-CCcccC
Q psy13875 85 VKAFQFVDKH-GEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~-~~~~~~ 100 (105)
|++|+..+++ +++||.
T Consensus 151 l~~l~~~~~~p~~~~p~ 167 (186)
T 1n8j_A 151 IKAAQYVAAHPGEVCPA 167 (186)
T ss_dssp HHHHHHHHHSTTCBBCT
T ss_pred HHHHHHHhhcCCCccCC
Confidence 9999988888 899875
No 13
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.65 E-value=9.6e-16 Score=106.77 Aligned_cols=95 Identities=58% Similarity=0.893 Sum_probs=81.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++.... +++.+++||+++|.+++++++||+.....|...|++||||++|+|++++.+....+++.+++++.
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~ 159 (202)
T 1uul_A 81 EYSHLAWTSIERKR-GGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRL 159 (202)
T ss_dssp HHHHHHHHHSCGGG-TCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHH
Confidence 46789999763221 34557899999999999999999986655767999999999999999999887777899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++|+...+++++||.
T Consensus 160 l~~l~~~~~~~~~~p~ 175 (202)
T 1uul_A 160 VKAFQFVEKHGEVCPA 175 (202)
T ss_dssp HHHHHHHHHHSCBBCT
T ss_pred HHHhhhhhhcCCccCC
Confidence 9999988888999886
No 14
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.65 E-value=8.8e-16 Score=108.64 Aligned_cols=94 Identities=34% Similarity=0.663 Sum_probs=79.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++..+ .+++.+++||+++|.+++++++||+.. +.|+..|++||||++|+|++++.+....+++.+++++.
T Consensus 97 ~~~~~~~~~~~~~-~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~ 174 (213)
T 2i81_A 97 KYTHLAWKKTPLA-KGGIGNIKHTLLSDITKSISKDYNVLF-DDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRI 174 (213)
T ss_dssp HHHHHHHHSSCGG-GTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHh-hCCccCCCceEEECCchHHHHHhCCcc-ccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHH
Confidence 5688999976322 134557899999999999999999986 34667899999999999999999877777899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..++++++|+.
T Consensus 175 l~~l~~~~~~~~~cp~ 190 (213)
T 2i81_A 175 IDAIQHHEKYGDVCPA 190 (213)
T ss_dssp HHHHHHHHHHCCBCCT
T ss_pred HHHHHhhhhcCCCcCC
Confidence 9999988888998875
No 15
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.64 E-value=8.4e-16 Score=108.61 Aligned_cols=95 Identities=55% Similarity=0.972 Sum_probs=79.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++..+ ++++.+++||+++|.+++++++||+..+..|...|++||||++|+|+++++++...+++.+++++.
T Consensus 93 ~~~~~~~~~~~~~-~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~ 171 (211)
T 2pn8_A 93 QFTHLAWINTPRR-QGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRL 171 (211)
T ss_dssp HHHHHHHHTSCGG-GTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHhhh-ccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHH
Confidence 5678999976322 123447899999999999999999976545667899999999999999999877777899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++|+..++++++|+.
T Consensus 172 l~~l~~~~~~~~~~p~ 187 (211)
T 2pn8_A 172 VQAFQYTDKHGEVCPA 187 (211)
T ss_dssp HHHHHHHHHHCCBBCT
T ss_pred HHHhhhcccCCcccCC
Confidence 9999988888998875
No 16
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.63 E-value=1.5e-15 Score=107.80 Aligned_cols=95 Identities=55% Similarity=0.973 Sum_probs=74.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++..+. .++.+++||+++|.+++++++||+..+..|+..|++||||++|+|+++++++.+.+++.+++++.
T Consensus 101 ~~~~~~~~~~~~~~-~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~ 179 (220)
T 1zye_A 101 HFSHLAWINTPRKN-GGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRL 179 (220)
T ss_dssp HHHHHHHHTSCGGG-TCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHH
Confidence 46789999763222 34457899999999999999999986655777899999999999999999887778899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++|+...+++++|+.
T Consensus 180 l~~l~~~~~~~~~cp~ 195 (220)
T 1zye_A 180 VKAFQFVEAHGEVSPA 195 (220)
T ss_dssp HHHHHHTTC-------
T ss_pred HHHhhhhcccCCccCC
Confidence 9999988888888875
No 17
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.62 E-value=2.8e-15 Score=106.96 Aligned_cols=94 Identities=40% Similarity=0.714 Sum_probs=77.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++..+. +++.+++||+++|.+++++++||+. ...|...|++||||++|+|+++++++...+++.+++++.
T Consensus 101 ~~~~~~~~~~~~~~-~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~ 178 (221)
T 2c0d_A 101 VYSHLAWKNMPIEK-GGIGNVEFTLVSDINKDISKNYNVL-YDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRT 178 (221)
T ss_dssp HHHHHHHHHSCGGG-TCCCSCSSEEEECTTSHHHHHTTCE-ETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHhhhh-cCccCCceEEEECCchHHHHHcCCc-ccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 46789999763221 2344689999999999999999997 545667899999999999999999877667899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++|+..++++++|+.
T Consensus 179 l~~L~~~~~~~~~cp~ 194 (221)
T 2c0d_A 179 IDSIIHVDTSGEVCPI 194 (221)
T ss_dssp HHHHHHHHHHCCSCC-
T ss_pred HHHHhhhhcCCCcCCC
Confidence 9999988888998864
No 18
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.61 E-value=3.5e-15 Score=103.40 Aligned_cols=95 Identities=57% Similarity=0.944 Sum_probs=79.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
.+++++|+++..+. .++.+++||+++|.+++++++||+.....|+..|++||||++|+|++++.+..+.+++.+++++.
T Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~ 157 (197)
T 1qmv_A 79 QFTHLAWINTPRKE-GGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRL 157 (197)
T ss_dssp HHHHHHHHTSCGGG-TCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHH
Confidence 45788999764222 23447899999999999999999986555667899999999999999999887778899999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..++++++|+.
T Consensus 158 l~~l~~~~~~~~~cp~ 173 (197)
T 1qmv_A 158 VQAFQYTDEHGEVCPA 173 (197)
T ss_dssp HHHHHHHHHHCCBBCT
T ss_pred HHhcchhhccCCccCC
Confidence 9999988888998875
No 19
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.61 E-value=2.4e-15 Score=105.17 Aligned_cols=76 Identities=17% Similarity=0.231 Sum_probs=62.7
Q ss_pred chHHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCcccc--CCc---cceeEEEECCCCCEEEEEeccCCC---
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIES--AGI---PLRGLFIIDTKGVLRQITVNDLPV--- 74 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~--~G~---~~ratfiID~~G~V~~~~~~~~~~--- 74 (105)
.+++|++|+++. ++ +||||||.+++++++||+..+. .|+ +.|++|||| +|+|+++++.+...
T Consensus 90 ~~~~~~~~~~~~--------~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~ 160 (182)
T 1xiy_A 90 DIYVLKSWFKSM--------DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMFQEKDKQHNI 160 (182)
T ss_dssp CHHHHHHHHHHT--------TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEEECSSCCTTC
T ss_pred CHHHHHHHHHHc--------CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEEEeCCccccc
Confidence 478999999873 45 7999999999999999998653 243 689999999 99999999876332
Q ss_pred ------CCCHHHHHHHHHhh
Q psy13875 75 ------GRSVEEVLRLVKAF 88 (105)
Q Consensus 75 ------~~~~~eil~~l~~l 88 (105)
..+++++|++|++.
T Consensus 161 ~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 161 QTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp SSCCCSTTSHHHHHHHHHCC
T ss_pred ccCcccCCCHHHHHHHHHhc
Confidence 37899999999763
No 20
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.61 E-value=2.6e-15 Score=103.57 Aligned_cols=94 Identities=37% Similarity=0.671 Sum_probs=78.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|+++.... +++.+++||+++|.+++++++||+.. ..|+..|++||||++|+|++++.+....+++.+++++.
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~ 153 (192)
T 2h01_A 76 KFTHLAWKKTPLSQ-GGIGNIKHTLISDISKSIARSYDVLF-NESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRL 153 (192)
T ss_dssp HHHHHHHHTSCGGG-TCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHH
T ss_pred HHHHHHHHHhHHhh-CCccCCCcCeEECCcHHHHHHhCCcC-cCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHH
Confidence 56889999763221 24457899999999999999999986 34667899999999999999999876667789999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..++++++|+.
T Consensus 154 l~~l~~~~~~~~~cp~ 169 (192)
T 2h01_A 154 IDALQHHEKYGDVCPA 169 (192)
T ss_dssp HHHHHHHHHHCCCCCS
T ss_pred HHHHhhhhhcCCCccC
Confidence 9999988888998875
No 21
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.60 E-value=5.3e-15 Score=106.70 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=66.9
Q ss_pred chHHHHHHHHhhhcCCCCCCCC-CceEEeeC-cchHHhhhCCcccc---CCccceeEEEECCCCCEEEEEeccC-CCCCC
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDL-KYPLLADF-KKEIATSYGVLIES---AGIPLRGLFIIDTKGVLRQITVNDL-PVGRS 77 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l-~fpllsD~-~~~vak~ygv~~~~---~G~~~ratfiID~~G~V~~~~~~~~-~~~~~ 77 (105)
.+++|++|+++. ++ +||+|||. +++++++||+..+. .|++.|++||||++|+|+++++.+. ...++
T Consensus 92 s~~~~~~f~~~~--------gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd 163 (224)
T 3keb_A 92 SPSSLARARHEH--------GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFD 163 (224)
T ss_dssp CHHHHHHHHHHH--------CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCC
T ss_pred CHHHHHHHHHHc--------CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCC
Confidence 468999999874 66 69999999 69999999998653 4677999999999999999998753 33578
Q ss_pred HHHHHHHHHhhhh
Q psy13875 78 VEEVLRLVKAFQF 90 (105)
Q Consensus 78 ~~eil~~l~~l~~ 90 (105)
+++++++|+.++.
T Consensus 164 ~~evl~~L~~l~~ 176 (224)
T 3keb_A 164 FDAIEKLLQEGEQ 176 (224)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999988764
No 22
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.60 E-value=1.8e-15 Score=104.58 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=64.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCCC--ceEEeeCcchHHhhhCCccccC-----C--ccceeEEEECCCCCEEEEEeccCCCC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLK--YPLLADFKKEIATSYGVLIESA-----G--IPLRGLFIIDTKGVLRQITVNDLPVG 75 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~--fpllsD~~~~vak~ygv~~~~~-----G--~~~ratfiID~~G~V~~~~~~~~~~~ 75 (105)
+++|++|+++. +++ ||+|+|.+++++++||+..++. | .+.|+||||| +|+|+++++++...+
T Consensus 90 ~~~~~~f~~~~--------~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g 160 (173)
T 3mng_A 90 AFVTGEWGRAH--------KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTG 160 (173)
T ss_dssp HHHHHHHHHHT--------TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSC
T ss_pred HHHHHHHHHHh--------CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCC
Confidence 57899999873 556 9999999999999999986531 2 4689999999 999999999988888
Q ss_pred CCHHHHHHHHHhh
Q psy13875 76 RSVEEVLRLVKAF 88 (105)
Q Consensus 76 ~~~~eil~~l~~l 88 (105)
+++.++.+.|++|
T Consensus 161 ~~~~~~~~vl~~l 173 (173)
T 3mng_A 161 LTCSLAPNIISQL 173 (173)
T ss_dssp SSTTSHHHHHHHC
T ss_pred cchHHHHHHHHhC
Confidence 8988888888765
No 23
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.57 E-value=2.3e-14 Score=101.67 Aligned_cols=95 Identities=56% Similarity=0.895 Sum_probs=79.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++++++|++...+. .++.+++||+++|.++.++++||+.....|+..|++||||++|+|++++.+.....++.+++++.
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~ 192 (222)
T 3ztl_A 114 QYSHLAWDNLDRKS-GGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRL 192 (222)
T ss_dssp HHHHHHHHHSCGGG-TSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHhhhh-ccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 45788999764222 23347899999999999999999986656777899999999999999999877777789999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++..++++++|+.
T Consensus 193 l~~l~~~~~~~~~c~~ 208 (222)
T 3ztl_A 193 LDAFQFVEKHGEVCPV 208 (222)
T ss_dssp HHHHHHHHHHSCBBCT
T ss_pred HHHhhcccccCccCCc
Confidence 9999999888888854
No 24
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.51 E-value=1.8e-14 Score=100.04 Aligned_cols=74 Identities=22% Similarity=0.227 Sum_probs=55.6
Q ss_pred chHHHHHHHHhhhcCCCCCCCC--CceEEeeCcchHHhhhCCccccC----C-ccceeEEEECCCCCEEEEEeccCCCC-
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDL--KYPLLADFKKEIATSYGVLIESA----G-IPLRGLFIIDTKGVLRQITVNDLPVG- 75 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l--~fpllsD~~~~vak~ygv~~~~~----G-~~~ratfiID~~G~V~~~~~~~~~~~- 75 (105)
.+++|++|+++. ++ +||||||++++++++||+..+.. | .+.|+||||| +|+|+++++.+.+.+
T Consensus 87 ~~~~~~~w~~~~--------~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~~~ 157 (171)
T 2xhf_A 87 DPFVMAAWGKTV--------DPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPDITGL 157 (171)
T ss_dssp CHHHHHHHHHHH--------CTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTSCSHH
T ss_pred CHHHHHHHHHhc--------CCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCCCCcc
Confidence 478999999874 44 89999999999999999986531 2 3789999999 999999999654431
Q ss_pred --CCHHHHHHHHH
Q psy13875 76 --RSVEEVLRLVK 86 (105)
Q Consensus 76 --~~~~eil~~l~ 86 (105)
.+.+++|+.|+
T Consensus 158 ~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 158 ACLLSIQRQKENK 170 (171)
T ss_dssp HHHHHHHHC----
T ss_pred cCCCHHHHHHHhc
Confidence 23566665543
No 25
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.51 E-value=2.1e-14 Score=100.23 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=56.4
Q ss_pred chHHHHHHHHhhhcCCCCCCCCC--ceEEeeCcchHHhhhCCcccc--CCc---cceeEEEECCCCCEEEEEeccCCCC-
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLK--YPLLADFKKEIATSYGVLIES--AGI---PLRGLFIIDTKGVLRQITVNDLPVG- 75 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~--fpllsD~~~~vak~ygv~~~~--~G~---~~ratfiID~~G~V~~~~~~~~~~~- 75 (105)
.+++|++|+++. +++ ||+|||++++++++||+..+. .|+ +.|+|||| ++|+|+++++++. ..
T Consensus 93 ~~~~~~~f~~~~--------~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~~~-~~~ 162 (176)
T 4f82_A 93 DAFVMGAWGRDL--------HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVEAP-GKF 162 (176)
T ss_dssp CHHHHHHHHHHT--------TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEECCT-TCC
T ss_pred CHHHHHHHHHHh--------CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEcCC-CCc
Confidence 478999999873 566 999999999999999998653 353 57999999 9999999999763 23
Q ss_pred --CCHHHHHHHH
Q psy13875 76 --RSVEEVLRLV 85 (105)
Q Consensus 76 --~~~~eil~~l 85 (105)
.+.+++|+.|
T Consensus 163 ~~~~a~~vL~~L 174 (176)
T 4f82_A 163 EVSDAASVLATL 174 (176)
T ss_dssp SSSSHHHHHHTC
T ss_pred chhhHHHHHHHh
Confidence 3455555543
No 26
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.50 E-value=9.9e-14 Score=95.07 Aligned_cols=92 Identities=32% Similarity=0.568 Sum_probs=74.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++.+++|+++.. .+.+++||+++|.+++++++||+.....|...|++||||++|+|++.+.+....+++.+++++.
T Consensus 76 ~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~ 151 (187)
T 1we0_A 76 HFVHKAWHENSP----AVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINK 151 (187)
T ss_dssp HHHHHHHHHSCH----HHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHH
T ss_pred HHHHHHHHHHhc----cccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 457888986521 1116799999999999999999986545667899999999999999999876666789999999
Q ss_pred HHhhhhhhhc-CCcccC
Q psy13875 85 VKAFQFVDKH-GEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~-~~~~~~ 100 (105)
|++++..+++ +++|+.
T Consensus 152 l~~l~~~~~~~~~~~p~ 168 (187)
T 1we0_A 152 VKAAQYVRENPGEVCPA 168 (187)
T ss_dssp HHHHHHHHTSTTCCC--
T ss_pred HHHHhhhhhCCCccccc
Confidence 9999988877 788774
No 27
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.49 E-value=1.8e-13 Score=92.33 Aligned_cols=76 Identities=17% Similarity=0.263 Sum_probs=64.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEeeC-cchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc-CCCCCCHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLADF-KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND-LPVGRSVEEV 81 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD~-~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~-~~~~~~~~ei 81 (105)
++++++|+++. ++ +||+++|. +++++++||+.....|+..|++||||++|+|++++++. ....++.+++
T Consensus 88 ~~~~~~~~~~~--------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~i 159 (166)
T 3p7x_A 88 PFAQKRWCASA--------GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAA 159 (166)
T ss_dssp HHHHHHHHHHH--------TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHH
Confidence 57889999873 67 89999999 89999999998655566789999999999999998865 4446789999
Q ss_pred HHHHHhh
Q psy13875 82 LRLVKAF 88 (105)
Q Consensus 82 l~~l~~l 88 (105)
++.|+++
T Consensus 160 l~~l~~l 166 (166)
T 3p7x_A 160 LAAYKNI 166 (166)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9998764
No 28
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.46 E-value=5.4e-13 Score=89.70 Aligned_cols=76 Identities=22% Similarity=0.408 Sum_probs=63.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEee-CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc-CCCCCCHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLAD-FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND-LPVGRSVEEV 81 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD-~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~-~~~~~~~~ei 81 (105)
++++++|+++. ++ +||+++| .++.++++||+.....|+..|++||||++|+|++.+.+. ....++.+++
T Consensus 85 ~~~~~~~~~~~--------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~ 156 (163)
T 1psq_A 85 PFAQKRWCGAE--------GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAA 156 (163)
T ss_dssp HHHHHHHHHHH--------TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred HHHHHHHHHhc--------CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHH
Confidence 56789999873 67 8999999 899999999998544466679999999999999999875 3445688999
Q ss_pred HHHHHhh
Q psy13875 82 LRLVKAF 88 (105)
Q Consensus 82 l~~l~~l 88 (105)
++.|++|
T Consensus 157 l~~l~~l 163 (163)
T 1psq_A 157 IAAAKAL 163 (163)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998864
No 29
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.46 E-value=1.9e-13 Score=94.58 Aligned_cols=94 Identities=37% Similarity=0.732 Sum_probs=76.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++.+++|+++.... .+..+++||+++|.+++++++||+..+ .|...|++||||++|+|++.+.+....+++.+++++.
T Consensus 78 ~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~ 155 (198)
T 1zof_A 78 EQVHFAWKNTPVEK-GGIGQVSFPMVADITKSISRDYDVLFE-EAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRM 155 (198)
T ss_dssp HHHHHHHHTSCGGG-TCCCCCSSCEEECTTSHHHHHTTCEET-TTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHH
T ss_pred HHHHHHHHHhhhhc-ccccCceeEEEECCchHHHHHhCCccc-CCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHH
Confidence 45788898653221 233488999999999999999999753 3556899999999999999999876667789999999
Q ss_pred HHhhhhhhhcCCcccC
Q psy13875 85 VKAFQFVDKHGEGSKR 100 (105)
Q Consensus 85 l~~l~~~~~~~~~~~~ 100 (105)
|++++...++|+.||.
T Consensus 156 l~~l~~~~~~~~~~p~ 171 (198)
T 1zof_A 156 VDALLHFEEHGEVCPA 171 (198)
T ss_dssp HHHHHHHHSSCCCCC-
T ss_pred HHHHHHhhccCCccCC
Confidence 9999988888888864
No 30
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.44 E-value=4.1e-13 Score=89.98 Aligned_cols=84 Identities=26% Similarity=0.340 Sum_probs=68.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++..++|+++. +++||+++|.+++++++||+... +...|++||||++|+|++++.+......+.+++++.
T Consensus 74 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~~~--~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~ 143 (161)
T 3drn_A 74 INSHKRFKEKY--------KLPFILVSDPDKKIRELYGAKGF--ILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKA 143 (161)
T ss_dssp HHHHHHHHHHT--------TCCSEEEECTTSHHHHHTTCCCS--SSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHh--------CCCceEEECCcHHHHHHcCCCCc--CcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHH
Confidence 56788999772 78999999999999999999721 245799999999999999999866667789999999
Q ss_pred HHhhhhhhhcCCcc
Q psy13875 85 VKAFQFVDKHGEGS 98 (105)
Q Consensus 85 l~~l~~~~~~~~~~ 98 (105)
|++|+..++.++++
T Consensus 144 l~~l~~~~~~~~~~ 157 (161)
T 3drn_A 144 LKQIKEEEISLEHH 157 (161)
T ss_dssp HHHHHHHHHC----
T ss_pred HHHhhhhhcchhhc
Confidence 99999888777654
No 31
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.39 E-value=1.4e-12 Score=89.34 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=63.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccC--Cc----cceeEEEECCCCCEEEEEeccCCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESA--GI----PLRGLFIIDTKGVLRQITVNDLPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~--G~----~~ratfiID~~G~V~~~~~~~~~~~~~~ 78 (105)
++.+++|+++. +++||+++|.+++++++||+..... |. ..|++||||++|+|++++. ......+.
T Consensus 96 ~~~~~~~~~~~--------~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~-~~~~~~~~ 166 (179)
T 3ixr_A 96 VKSHDSFCAKQ--------GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR-QVKVPGHA 166 (179)
T ss_dssp HHHHHHHHHHH--------TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC-SCCSTTHH
T ss_pred HHHHHHHHHHc--------CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc-CCCCCCCH
Confidence 46789999873 7899999999999999999975422 21 3699999999999999994 45556789
Q ss_pred HHHHHHHHhhhh
Q psy13875 79 EEVLRLVKAFQF 90 (105)
Q Consensus 79 ~eil~~l~~l~~ 90 (105)
+++++.|++|+.
T Consensus 167 ~~il~~l~~l~~ 178 (179)
T 3ixr_A 167 EEVLNKLKAHAE 178 (179)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 32
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.39 E-value=2.5e-12 Score=88.80 Aligned_cols=86 Identities=31% Similarity=0.517 Sum_probs=67.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++.+++|+++. +.+.+++||+++|.++.++++||+... .|...|++||||++|+|++.+.+.....++.+++++.
T Consensus 90 ~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~ 164 (195)
T 2bmx_A 90 EFAHFQWRAQH----NDLKTLPFPMLSDIKRELSQAAGVLNA-DGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRV 164 (195)
T ss_dssp HHHHHHHHHHC----TTGGGCCSCEEECTTSHHHHHHTCBCT-TSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred HHHHHHHHHHh----ccccCCceeEEeCCchHHHHHhCCccc-CCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHH
Confidence 45788999763 223378999999999999999999755 4656899999999999999999877667789999999
Q ss_pred HHhhhhhhhcCCccc
Q psy13875 85 VKAFQFVDKHGEGSK 99 (105)
Q Consensus 85 l~~l~~~~~~~~~~~ 99 (105)
|++++. ++.|+
T Consensus 165 l~~l~~----~~~~p 175 (195)
T 2bmx_A 165 LDALQS----DELCA 175 (195)
T ss_dssp HHHHHC---------
T ss_pred HHHHhh----CCCcC
Confidence 998874 44554
No 33
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.37 E-value=9.9e-13 Score=91.52 Aligned_cols=71 Identities=15% Similarity=0.319 Sum_probs=56.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCC--ceEEeeCcchHHhhhCCcccc--CCc---cceeEEEECCCCCEEEEEeccCCCC--
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLK--YPLLADFKKEIATSYGVLIES--AGI---PLRGLFIIDTKGVLRQITVNDLPVG-- 75 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~--fpllsD~~~~vak~ygv~~~~--~G~---~~ratfiID~~G~V~~~~~~~~~~~-- 75 (105)
++++++|+++. +++ ||+|+|++++++++||+..+. .|+ +.|+||||| +|+|+++++++.+..
T Consensus 103 ~~~~~~f~~~~--------~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~ 173 (184)
T 3uma_A 103 LHVMGAWATHS--------GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQAT 173 (184)
T ss_dssp HHHHHHHHHHH--------TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCS
T ss_pred HHHHHHHHHHh--------CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCc
Confidence 57899999874 667 999999999999999998642 243 579999996 999999999864433
Q ss_pred -CCHHHHHHH
Q psy13875 76 -RSVEEVLRL 84 (105)
Q Consensus 76 -~~~~eil~~ 84 (105)
.+.+++|+.
T Consensus 174 ~~~~~~vL~~ 183 (184)
T 3uma_A 174 ASGAAAMLEL 183 (184)
T ss_dssp TTSHHHHHHH
T ss_pred CCCHHHHHhh
Confidence 456666654
No 34
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.37 E-value=2.2e-12 Score=86.05 Aligned_cols=77 Identities=19% Similarity=0.327 Sum_probs=62.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccC--Cc----cceeEEEECCCCCEEEEEeccCCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESA--GI----PLRGLFIIDTKGVLRQITVNDLPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~--G~----~~ratfiID~~G~V~~~~~~~~~~~~~~ 78 (105)
++.+++|+++. +++||+++|.+++++++||+..... |. ..|++||||++|+|++++. ......+.
T Consensus 80 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~-~~~~~~~~ 150 (163)
T 3gkn_A 80 VKSHDNFCAKQ--------GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWR-KVKVAGHA 150 (163)
T ss_dssp HHHHHHHHHHH--------CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEEC-SCCSTTHH
T ss_pred HHHHHHHHHHh--------CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEc-CCCcccCH
Confidence 57889999873 7899999999999999999985321 11 2799999999999999994 45556788
Q ss_pred HHHHHHHHhhhh
Q psy13875 79 EEVLRLVKAFQF 90 (105)
Q Consensus 79 ~eil~~l~~l~~ 90 (105)
+++++.|++|+.
T Consensus 151 ~~il~~l~~l~~ 162 (163)
T 3gkn_A 151 DAVLAALKAHAK 162 (163)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 35
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.36 E-value=5.1e-12 Score=83.86 Aligned_cols=77 Identities=27% Similarity=0.538 Sum_probs=64.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeC--cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADF--KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVL 82 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~--~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil 82 (105)
++.+++|+++. +++||+++|. ++.+++.||+.....|++.|++||||++|+|++.+.+........++++
T Consensus 81 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 152 (160)
T 1xvw_A 81 PPTHKIWATQS--------GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWT 152 (160)
T ss_dssp HHHHHHHHHHH--------TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHH
T ss_pred HHHHHHHHHhc--------CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHH
Confidence 46788999773 6799999996 8999999999755446656699999999999999998766667899999
Q ss_pred HHHHhhh
Q psy13875 83 RLVKAFQ 89 (105)
Q Consensus 83 ~~l~~l~ 89 (105)
+.|++++
T Consensus 153 ~~l~~l~ 159 (160)
T 1xvw_A 153 DALAALT 159 (160)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9998875
No 36
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.34 E-value=6.3e-12 Score=84.88 Aligned_cols=75 Identities=25% Similarity=0.445 Sum_probs=61.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEee-CcchHHhhhCCcccc---CCccceeEEEECCCCCEEEEEecc-CCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLAD-FKKEIATSYGVLIES---AGIPLRGLFIIDTKGVLRQITVND-LPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD-~~~~vak~ygv~~~~---~G~~~ratfiID~~G~V~~~~~~~-~~~~~~~ 78 (105)
++.+++|+++. ++ +||+++| .++++ ++||+.... .|...|++||||++|+|++++.+. .....+.
T Consensus 90 ~~~~~~~~~~~--------~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 160 (171)
T 2yzh_A 90 PFAQKRFCESF--------NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNY 160 (171)
T ss_dssp HHHHHHHHHHT--------TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCC
T ss_pred HHHHHHHHHHc--------CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCH
Confidence 56789999872 67 8999999 88999 999997543 255679999999999999999864 3345688
Q ss_pred HHHHHHHHhh
Q psy13875 79 EEVLRLVKAF 88 (105)
Q Consensus 79 ~eil~~l~~l 88 (105)
+++++.|++|
T Consensus 161 ~~ll~~l~~l 170 (171)
T 2yzh_A 161 DEVVNKVKEL 170 (171)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 37
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.32 E-value=2.9e-12 Score=89.64 Aligned_cols=74 Identities=16% Similarity=0.277 Sum_probs=60.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEeeC-cchHHhhhCCcccc---CCccceeEEEECCCCCEEEEEecc-CCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLADF-KKEIATSYGVLIES---AGIPLRGLFIIDTKGVLRQITVND-LPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD~-~~~vak~ygv~~~~---~G~~~ratfiID~~G~V~~~~~~~-~~~~~~~ 78 (105)
++++++|+++ .++ +||+++|. +++++++||+.... .|+..|++||||++|+|++++++. ....++.
T Consensus 121 ~~~~~~~~~~--------~~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~ 192 (200)
T 3zrd_A 121 PFAQSRFCGA--------EGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNY 192 (200)
T ss_dssp HHHHTTCTTT--------TTCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCH
T ss_pred HHHHHHHHHH--------cCCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCCH
Confidence 5677788865 278 99999999 99999999998543 355689999999999999999865 5556789
Q ss_pred HHHHHHHH
Q psy13875 79 EEVLRLVK 86 (105)
Q Consensus 79 ~eil~~l~ 86 (105)
++++++|+
T Consensus 193 ~~~l~~Lk 200 (200)
T 3zrd_A 193 DAALAALK 200 (200)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99988763
No 38
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.31 E-value=6.8e-12 Score=89.27 Aligned_cols=76 Identities=17% Similarity=0.335 Sum_probs=62.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCC-ceEEeeCcchHHhhhCCcccc--CCc---cceeEEEECCCCCEEEEEeccCCCC---
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLK-YPLLADFKKEIATSYGVLIES--AGI---PLRGLFIIDTKGVLRQITVNDLPVG--- 75 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~-fpllsD~~~~vak~ygv~~~~--~G~---~~ratfiID~~G~V~~~~~~~~~~~--- 75 (105)
++++++|+++. +++ ||+|+|.+++++++||+..+. .|+ +.|+|||| ++|+|++++++....+
T Consensus 80 ~~~~~~~~~~~--------~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~ 150 (241)
T 1nm3_A 80 TFVMNAWKEDE--------KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPF 150 (241)
T ss_dssp HHHHHHHHHHT--------TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCC
T ss_pred HHHHHHHHHhc--------CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccc
Confidence 57899999873 565 999999999999999997542 244 57999999 9999999999875554
Q ss_pred --CCHHHHHHHHHhhh
Q psy13875 76 --RSVEEVLRLVKAFQ 89 (105)
Q Consensus 76 --~~~~eil~~l~~l~ 89 (105)
++.+++++.|++.+
T Consensus 151 ~~~~~~~il~~l~~~~ 166 (241)
T 1nm3_A 151 KVSDADTMLKYLAPQH 166 (241)
T ss_dssp SSSSHHHHHHHHCTTS
T ss_pred eecCHHHHHHHhhhhc
Confidence 68999999998653
No 39
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.30 E-value=4e-12 Score=85.69 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCC--CceEEeeCcchHHhhhCCcccc--CCc---cceeEEEECCCCCEEEEEeccCCCCC-
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL--KYPLLADFKKEIATSYGVLIES--AGI---PLRGLFIIDTKGVLRQITVNDLPVGR- 76 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l--~fpllsD~~~~vak~ygv~~~~--~G~---~~ratfiID~~G~V~~~~~~~~~~~~- 76 (105)
++++++|+++. ++ +||+|+|.+++++++||+.... .|+ +.|++|||| +|+|+++++++ +.++
T Consensus 82 ~~~~~~~~~~~--------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~ 151 (162)
T 1tp9_A 82 PFVMKAWAKSY--------PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG-GGEFT 151 (162)
T ss_dssp HHHHHHHHHTC--------TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS-SSCCS
T ss_pred HHHHHHHHHhc--------CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC-CCCCc
Confidence 57899999762 56 8999999999999999997432 242 479999999 99999999987 4443
Q ss_pred --CHHHHHHH
Q psy13875 77 --SVEEVLRL 84 (105)
Q Consensus 77 --~~~eil~~ 84 (105)
+.+++|+.
T Consensus 152 ~~~~~~vl~~ 161 (162)
T 1tp9_A 152 VSSAEDILKD 161 (162)
T ss_dssp SCSHHHHHTT
T ss_pred cCCHHHHHhh
Confidence 57777654
No 40
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.29 E-value=3.9e-12 Score=85.73 Aligned_cols=73 Identities=14% Similarity=0.281 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEeeC-cchHHhhhCCcccc---CCccceeEEEECCCCCEEEEEec-cCCCCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLADF-KKEIATSYGVLIES---AGIPLRGLFIIDTKGVLRQITVN-DLPVGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD~-~~~vak~ygv~~~~---~G~~~ratfiID~~G~V~~~~~~-~~~~~~~~ 78 (105)
++++++|+++ .++ +||+++|. ++.++++||+.... .|...|++||||++|+|++.+.+ .....+++
T Consensus 86 ~~~~~~~~~~--------~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~ 157 (165)
T 1q98_A 86 PFAQARFCGA--------EGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNY 157 (165)
T ss_dssp HHHHTTCTTT--------TTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCH
T ss_pred HHHHHHHHHH--------cCCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCH
Confidence 4567788865 267 79999998 89999999997532 25557999999999999999986 34556789
Q ss_pred HHHHHHH
Q psy13875 79 EEVLRLV 85 (105)
Q Consensus 79 ~eil~~l 85 (105)
+++++.|
T Consensus 158 ~~~l~~l 164 (165)
T 1q98_A 158 EAALAVL 164 (165)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9988765
No 41
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.29 E-value=6.1e-12 Score=85.98 Aligned_cols=73 Identities=18% Similarity=0.278 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccC----Cc-cceeEEEECCCCCEEEEEeccCCCC---C
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESA----GI-PLRGLFIIDTKGVLRQITVNDLPVG---R 76 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~----G~-~~ratfiID~~G~V~~~~~~~~~~~---~ 76 (105)
++++++|+++. ++ .++||+|+|.+++++++||+..+.. |+ ..|.+|||| +|+|++++++..+.+ .
T Consensus 90 ~~~~~~~~~~~-----~~-~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~~~~~ 162 (171)
T 2pwj_A 90 PYTVNAWAEKI-----QA-KDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEESPSDVKVS 162 (171)
T ss_dssp HHHHHHHHHHT-----TC-TTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECSSTTCCSSS
T ss_pred HHHHHHHHHHh-----CC-CCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeecCCCCCccc
Confidence 56899999873 22 2489999999999999999985431 32 368999999 999999999876543 3
Q ss_pred CHHHHHHH
Q psy13875 77 SVEEVLRL 84 (105)
Q Consensus 77 ~~~eil~~ 84 (105)
+.+++|+.
T Consensus 163 ~~~~il~~ 170 (171)
T 2pwj_A 163 GAETILGQ 170 (171)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHhc
Confidence 56666554
No 42
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.23 E-value=1.4e-11 Score=82.54 Aligned_cols=76 Identities=18% Similarity=0.294 Sum_probs=60.4
Q ss_pred HHHHHHHHhhhcCCCCCCCC-CceEEee-CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc-CCCCCCHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDL-KYPLLAD-FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND-LPVGRSVEEVL 82 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l-~fpllsD-~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~-~~~~~~~~eil 82 (105)
+..++|+++ .++ +||+++| .+++++++||+.....|+..|++||||++|+|++++.+. .....+.++++
T Consensus 88 ~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~ 159 (167)
T 2jsy_A 88 FAQARWCGA--------NGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPI 159 (167)
T ss_dssp GGTSCCGGG--------SSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHH
T ss_pred HHHHHHHHh--------cCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHH
Confidence 345667755 267 8999999 889999999998544465679999999999999999864 33455789999
Q ss_pred HHHHhhh
Q psy13875 83 RLVKAFQ 89 (105)
Q Consensus 83 ~~l~~l~ 89 (105)
+.|++|.
T Consensus 160 ~~l~~ll 166 (167)
T 2jsy_A 160 EAAKALV 166 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998764
No 43
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.16 E-value=7.7e-11 Score=80.10 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCcccc---CCccceeEEEECCCCCEEEEEec-cCCCCCCHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIES---AGIPLRGLFIIDTKGVLRQITVN-DLPVGRSVE 79 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~---~G~~~ratfiID~~G~V~~~~~~-~~~~~~~~~ 79 (105)
+++.++|+++. ++ +||+++|.++.++++||+.... .|...|++||||++|+|++++.+ ......+.+
T Consensus 86 ~~~~~~~~~~~--------~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~ 157 (175)
T 1xvq_A 86 PFAQKRFCGAE--------GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYE 157 (175)
T ss_dssp HHHHTTCC--------------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHH
T ss_pred HHHHHHHHHHc--------CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHH
Confidence 35567787652 66 8999999999999999997532 35567999999999999999985 444556888
Q ss_pred HHHHHHHh
Q psy13875 80 EVLRLVKA 87 (105)
Q Consensus 80 eil~~l~~ 87 (105)
++++.+++
T Consensus 158 ~~l~~l~~ 165 (175)
T 1xvq_A 158 AALAALGA 165 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888764
No 44
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.15 E-value=5.8e-11 Score=80.96 Aligned_cols=72 Identities=17% Similarity=0.223 Sum_probs=54.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCC--ceEEeeCcchHHhhhCCcccc---CC--ccceeEEEECCCCCEEEEEeccCCCCCC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLK--YPLLADFKKEIATSYGVLIES---AG--IPLRGLFIIDTKGVLRQITVNDLPVGRS 77 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~--fpllsD~~~~vak~ygv~~~~---~G--~~~ratfiID~~G~V~~~~~~~~~~~~~ 77 (105)
++++++|+++. +++ ||+|+|.+++++++||+.... .| .+.|+|||| ++|+|+++++++.....+
T Consensus 78 ~~~~~~~~~~~--------~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~ 148 (167)
T 2wfc_A 78 SFVMDAWGKAH--------GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLT 148 (167)
T ss_dssp HHHHHHHHHHT--------TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTTSSSSS
T ss_pred HHHHHHHHHhc--------CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEecCCCCcce
Confidence 56899999873 567 999999999999999997431 12 246999999 999999999987554433
Q ss_pred ---HHHHHHHH
Q psy13875 78 ---VEEVLRLV 85 (105)
Q Consensus 78 ---~~eil~~l 85 (105)
.+.+|+.|
T Consensus 149 ~~~~~~~~~~~ 159 (167)
T 2wfc_A 149 CSLAPNILSQL 159 (167)
T ss_dssp TTSHHHHHHHH
T ss_pred eccHHHHHHHh
Confidence 44454444
No 45
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.08 E-value=1.7e-10 Score=76.84 Aligned_cols=72 Identities=26% Similarity=0.350 Sum_probs=53.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCcccc-CCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIES-AGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~-~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
++.+++|+++. +++||+++|.+++++++||+.... .| ..|++||| ++|+|++++.+..+ ..+.+++++
T Consensus 79 ~~~~~~~~~~~--------~~~~~~l~D~~~~~~~~~gv~~~p~~g-~~~~~~li-~~G~i~~~~~g~~~-~~~~~~~~~ 147 (159)
T 2a4v_A 79 VTSQKKFQSKQ--------NLPYHLLSDPKREFIGLLGAKKTPLSG-SIRSHFIF-VDGKLKFKRVKISP-EVSVNDAKK 147 (159)
T ss_dssp HHHHHHHHHHH--------TCSSEEEECTTCHHHHHHTCBSSSSSC-BCCEEEEE-ETTEEEEEEESCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHh--------CCCceEEECCccHHHHHhCCcccccCC-ccceEEEE-cCCEEEEEEccCCc-cccHHHHHH
Confidence 56789999873 679999999999999999997432 24 46899999 99999999986432 223444444
Q ss_pred HHHh
Q psy13875 84 LVKA 87 (105)
Q Consensus 84 ~l~~ 87 (105)
.|.+
T Consensus 148 ~l~~ 151 (159)
T 2a4v_A 148 EVLE 151 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 46
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.99 E-value=2.9e-09 Score=69.96 Aligned_cols=68 Identities=21% Similarity=0.287 Sum_probs=56.3
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcc-----hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKK-----EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSV 78 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~-----~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~ 78 (105)
..+..++|+++. +++||++.|.++ .+++.||+. + .|++||||++|+|++.+.+.. +.
T Consensus 79 ~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~ 140 (158)
T 3eyt_A 79 TPISLKAFLHEY--------RIKFPVGVDQPGDGAMPRTMAAYQMR----G--TPSLLLIDKAGDLRAHHFGDV----SE 140 (158)
T ss_dssp CHHHHHHHHHHT--------TCCSCEEEECCCSSSSCHHHHHTTCC----S--SSEEEEECTTSEEEEEEESCC----CH
T ss_pred CHHHHHHHHHHc--------CCCceEEEcCccchhhHHHHHHcCCC----C--CCEEEEECCCCCEEEEEeCCC----CH
Confidence 356788888772 789999999988 799999987 3 699999999999999998754 57
Q ss_pred HHHHHHHHhhh
Q psy13875 79 EEVLRLVKAFQ 89 (105)
Q Consensus 79 ~eil~~l~~l~ 89 (105)
+++.+.|+++.
T Consensus 141 ~~l~~~i~~ll 151 (158)
T 3eyt_A 141 LLLGAEIATLL 151 (158)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77888887764
No 47
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.97 E-value=3.7e-09 Score=69.11 Aligned_cols=68 Identities=12% Similarity=0.323 Sum_probs=56.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++..++|+++. +++||+++|.++.+++.||+. + .|++||||++|+|++.+.+.. +.+++.+.
T Consensus 71 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~G~~----~~~~l~~~ 132 (151)
T 2f9s_A 71 KIAVHNFMKSY--------GVNFPVVLDTDRQVLDAYDVS----P--LPTTFLINPEGKVVKVVTGTM----TESMIHDY 132 (151)
T ss_dssp HHHHHHHHHHH--------TCCSCEEEETTSHHHHHTTCC----S--SCEEEEECTTSEEEEEEESCC----CHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEECCchHHHHhcCCC----C--CCeEEEECCCCcEEEEEeCCC----CHHHHHHH
Confidence 35667888763 679999999999999999987 3 699999999999999988643 67888888
Q ss_pred HHhhhh
Q psy13875 85 VKAFQF 90 (105)
Q Consensus 85 l~~l~~ 90 (105)
|+++..
T Consensus 133 l~~ll~ 138 (151)
T 2f9s_A 133 MNLIKP 138 (151)
T ss_dssp HHHHSC
T ss_pred HHHHHh
Confidence 887653
No 48
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.97 E-value=4.2e-09 Score=69.18 Aligned_cols=68 Identities=21% Similarity=0.416 Sum_probs=56.0
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcch------HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCC
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKE------IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRS 77 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~------vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~ 77 (105)
.++..++|+++. +++||++.|.++. +++.||+. + .|++||||++|+|++.+.+.. +
T Consensus 81 ~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~ 142 (160)
T 3lor_A 81 TPEALKVFIDEF--------GIKFPVAVDMPREGQRIPSTMKKYRLE----G--TPSIILADRKGRIRQVQFGQV----D 142 (160)
T ss_dssp CHHHHHHHHHHT--------TCCSCEEEECCCTTCSSCHHHHHTTCC----S--SSEEEEECTTSBEEEEEESCC----C
T ss_pred CHHHHHHHHHHc--------CCCCcEEECCccccchhhhHHHhcccC----c--cceEEEECCCCcEEEEecCcC----C
Confidence 346778888762 7899999999988 99999987 3 699999999999999998754 5
Q ss_pred HHHHHHHHHhhh
Q psy13875 78 VEEVLRLVKAFQ 89 (105)
Q Consensus 78 ~~eil~~l~~l~ 89 (105)
.+++.+.|+++-
T Consensus 143 ~~~l~~~i~~ll 154 (160)
T 3lor_A 143 DFVLGLLLGSLL 154 (160)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677777777654
No 49
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.96 E-value=4.1e-09 Score=68.85 Aligned_cols=72 Identities=21% Similarity=0.334 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
.+..++|+++. +++||+++|.++.+++.||+. ..|++||||++|+|++.+.+... .+.+++.+.
T Consensus 74 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~ 137 (154)
T 3kcm_A 74 KVAVEEFFRKT--------GFTLPVLLDADKRVGKLYGTT------GVPETFVIDRHGVILKKVVGAME--WDHPEVIAF 137 (154)
T ss_dssp HHHHHHHHHHH--------CCCCCEEECTTCHHHHHHTCC------SBCEEEEECTTSBEEEEEESCCC--TTSHHHHHH
T ss_pred hHHHHHHHHHc--------CCCeeEEecCchHHHHHhCCC------CCCeEEEECCCCcEEEEEcCCCc--cccHHHHHH
Confidence 45677888763 779999999999999999987 36999999999999999987542 356788888
Q ss_pred HHhhhhhh
Q psy13875 85 VKAFQFVD 92 (105)
Q Consensus 85 l~~l~~~~ 92 (105)
|+++....
T Consensus 138 l~~l~~~~ 145 (154)
T 3kcm_A 138 LNNELSKA 145 (154)
T ss_dssp HHTC----
T ss_pred HHHHHHHh
Confidence 88876543
No 50
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.91 E-value=7.4e-09 Score=72.72 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=56.8
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCC-----CCCCH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLP-----VGRSV 78 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~-----~~~~~ 78 (105)
.++..++|+++. +++||+++|.++.++++||+. ..|++||||++|+|++....... .....
T Consensus 110 ~~~~~~~~~~~~--------~~~~~~l~D~~~~~~~~~~v~------~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~ 175 (218)
T 3u5r_E 110 TLERVGAEVKAY--------GYGFPYLKDASQSVAKAYGAA------CTPDFFLYDRERRLVYHGQFDDARPGNGKDVTG 175 (218)
T ss_dssp SHHHHHHHHHHH--------TCCSCEEECTTCHHHHHHTCC------EESEEEEECTTCBEEEEECSSSCCTTSCCCCCC
T ss_pred CHHHHHHHHHHh--------CCCccEEECCccHHHHHcCCC------CCCeEEEECCCCcEEEeccccccccccccccCH
Confidence 456788999773 789999999999999999987 36999999999999987643221 12346
Q ss_pred HHHHHHHHhhhh
Q psy13875 79 EEVLRLVKAFQF 90 (105)
Q Consensus 79 ~eil~~l~~l~~ 90 (105)
+++.++|+++..
T Consensus 176 ~~l~~~i~~ll~ 187 (218)
T 3u5r_E 176 ADLRAAVDAVLK 187 (218)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 778888877653
No 51
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.91 E-value=8e-09 Score=70.30 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=57.3
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccC-----CCCCCH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDL-----PVGRSV 78 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~-----~~~~~~ 78 (105)
.++..++|+++. +++||+++|.++.+++.||+. ..|++||||++|+|++.+.... ....+.
T Consensus 97 ~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~ 162 (196)
T 2ywi_A 97 SPENMKKVAEEL--------GYPFPYLYDETQEVAKAYDAA------CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTG 162 (196)
T ss_dssp SHHHHHHHHHHH--------TCCSCEEECSSCHHHHHHTCC------EESEEEEEETTCBEEEEECSSSCCTTTCCCCCC
T ss_pred CHHHHHHHHHHc--------CCCceEEECCchHHHHHhCCC------CCCeEEEEcCCCeEEEccccCcccccccCccCH
Confidence 356788888773 779999999999999999986 3699999999999999875321 112367
Q ss_pred HHHHHHHHhhhh
Q psy13875 79 EEVLRLVKAFQF 90 (105)
Q Consensus 79 ~eil~~l~~l~~ 90 (105)
+++.+.|+++..
T Consensus 163 ~~l~~~i~~ll~ 174 (196)
T 2ywi_A 163 ESIRAALDALLE 174 (196)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 888888887653
No 52
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.89 E-value=9.2e-09 Score=64.94 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=52.5
Q ss_pred HHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
...++|.++ .++ +||+++|.++.+++.||+. + .|++||||++|+|++.+.+.. +.+++.+.
T Consensus 72 ~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~~~l~~~ 133 (138)
T 4evm_A 72 ADFKNWYKG--------LDYKNLPVLVDPSGKLLETYGVR----S--YPTQAFIDKEGKLVKTHPGFM----EKDAILQT 133 (138)
T ss_dssp HHHHHHHTT--------CCCTTCCEEECTTCHHHHHTTCC----S--SSEEEEECTTCCEEEEEESCC----CHHHHHHH
T ss_pred HHHHHHHhh--------cCCCCeeEEECcchHHHHHcCcc----c--CCeEEEECCCCcEEEeecCCC----cHHHHHHH
Confidence 445566644 145 8999999999999999987 3 699999999999999998643 57888888
Q ss_pred HHhh
Q psy13875 85 VKAF 88 (105)
Q Consensus 85 l~~l 88 (105)
|+++
T Consensus 134 l~~l 137 (138)
T 4evm_A 134 LKEL 137 (138)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8765
No 53
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.89 E-value=1.3e-08 Score=66.21 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=55.6
Q ss_pred HHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLV 85 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l 85 (105)
+..++|.++ .+++||+++|.++.+++.||+. ..|++||||++|+|++.+.+.. ..+.+++.+.|
T Consensus 74 ~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~i 137 (152)
T 3gl3_A 74 GDAMKFLAQ--------VPAEFTVAFDPKGQTPRLYGVK------GMPTSFLIDRNGKVLLQHVGFR--PADKEALEQQI 137 (152)
T ss_dssp HHHHHHHHH--------SCCCSEEEECTTCHHHHHTTCC------SSSEEEEECTTSBEEEEEESCC--TTTHHHHHHHH
T ss_pred HHHHHHHHH--------cCCCCceeECCcchhHHHcCCC------CCCeEEEECCCCCEEEEEccCC--CcCHHHHHHHH
Confidence 456677766 2779999999999999999987 3699999999999999998743 34678888888
Q ss_pred Hhhh
Q psy13875 86 KAFQ 89 (105)
Q Consensus 86 ~~l~ 89 (105)
+++.
T Consensus 138 ~~~~ 141 (152)
T 3gl3_A 138 LAAL 141 (152)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7764
No 54
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.84 E-value=1.2e-08 Score=66.80 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=54.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCc---chHHhhhC--CccccCCccceeEEEECCCCCEEEEEeccCCCCCCHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFK---KEIATSYG--VLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVE 79 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~---~~vak~yg--v~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~ 79 (105)
++..++|+++ .+++||++.|.. ..+++.|| +. ..|++||||++|+|++.+.+.. +.+
T Consensus 68 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~ 129 (151)
T 3raz_A 68 SDNIGNFLKQ--------TPVSYPIWRYTGANSRNFMKTYGNTVG------VLPFTVVEAPKCGYRQTITGEV----NEK 129 (151)
T ss_dssp HHHHHHHHHH--------SCCSSCEEEECCSCHHHHHHTTTCCSC------CSSEEEEEETTTTEEEECCSCC----CHH
T ss_pred hHHHHHHHHH--------cCCCCceEecCccchHHHHHHhCCccC------CCCEEEEECCCCcEEEEECCCC----CHH
Confidence 3567888876 278999999874 56889999 44 3699999999999999987644 578
Q ss_pred HHHHHHHhhhhhh
Q psy13875 80 EVLRLVKAFQFVD 92 (105)
Q Consensus 80 eil~~l~~l~~~~ 92 (105)
++.+.|+++....
T Consensus 130 ~l~~~l~~l~~~~ 142 (151)
T 3raz_A 130 SLTDAVKLAHSKC 142 (151)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHh
Confidence 8888888876543
No 55
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.84 E-value=2.2e-08 Score=63.63 Aligned_cols=68 Identities=18% Similarity=0.169 Sum_probs=53.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
.+..++|+++. +++||+++|.++.+++.||+. + .|++||||++|+|+ .+.. .....+.+++.+.
T Consensus 67 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~i~----~--~P~~~lid~~G~i~-~~~~-~~g~~~~~~l~~~ 130 (136)
T 1lu4_A 67 VGAMQSFVSKY--------NLNFTNLNDADGVIWARYNVP----W--QPAFVFYRADGTST-FVNN-PTAAMSQDELSGR 130 (136)
T ss_dssp HHHHHHHHHHH--------TCCSEEEECTTSHHHHHTTCC----S--SSEEEEECTTSCEE-EECC-SSSCCCHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEECCchhHHHhcCCC----C--CCEEEEECCCCcEE-EEEc-CCCccCHHHHHHH
Confidence 45677788663 779999999999999999986 3 69999999999999 7761 1112368888888
Q ss_pred HHhh
Q psy13875 85 VKAF 88 (105)
Q Consensus 85 l~~l 88 (105)
|+++
T Consensus 131 l~~l 134 (136)
T 1lu4_A 131 VAAL 134 (136)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8765
No 56
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.83 E-value=2.2e-08 Score=64.41 Aligned_cols=67 Identities=12% Similarity=0.215 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++..++|+++. +++||++.|.++.+++.||+. + .|++||||++|+|++.+.+.. +.+++.+.
T Consensus 78 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~~~l~~~ 139 (148)
T 2b5x_A 78 PGKIKETAAEH--------DITQPIFVDSDHALTDAFENE----Y--VPAYYVFDKTGQLRHFQAGGS----GMKMLEKR 139 (148)
T ss_dssp HHHHHHHHHHT--------TCCSCEEECSSCHHHHHTCCC----C--SSEEEEECTTCBEEEEEESCS----TTHHHHHH
T ss_pred HHHHHHHHHHc--------CCCcceEECCchhHHHHhCCC----C--CCEEEEECCCCcEEEEecCCC----CHHHHHHH
Confidence 45677888662 779999999999999999987 3 699999999999999988743 56677777
Q ss_pred HHhhh
Q psy13875 85 VKAFQ 89 (105)
Q Consensus 85 l~~l~ 89 (105)
|+++.
T Consensus 140 l~~~l 144 (148)
T 2b5x_A 140 VNRVL 144 (148)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 57
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.83 E-value=2e-08 Score=76.19 Aligned_cols=70 Identities=17% Similarity=0.196 Sum_probs=57.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++..++|+++. +++||+++|.+..+++.|++. ..|++||||++|+|++.+.+.. +.+++.+.
T Consensus 132 ~~~~~~~~~~~--------~l~fpv~~D~~~~l~~~ygV~------~~Pt~~lID~~G~Iv~~~~G~~----~~~~l~~~ 193 (352)
T 2hyx_A 132 PGNVAKGAANL--------GISYPIALDNNYATWTNYRNR------YWPAEYLIDATGTVRHIKFGEG----DYNVTETL 193 (352)
T ss_dssp HHHHHHHHHHH--------TCCSCEEECTTSHHHHHTTCC------EESEEEEECTTSBEEEEEESBC----CHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCccEEeCCcHHHHHHcCCC------ccCEEEEEeCCCeEEEEEcCCC----CHHHHHHH
Confidence 45677888763 789999999999999999986 3699999999999999998743 57788888
Q ss_pred HHhhhhhh
Q psy13875 85 VKAFQFVD 92 (105)
Q Consensus 85 l~~l~~~~ 92 (105)
|+++....
T Consensus 194 I~~lL~e~ 201 (352)
T 2hyx_A 194 VRQLLNDA 201 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 87765433
No 58
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.82 E-value=1.4e-08 Score=67.69 Aligned_cols=76 Identities=8% Similarity=0.143 Sum_probs=56.9
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCc---eEEeeCcchHHhhhCCcc-----c--c--C-CccceeEEEECCCCCEEEEEec
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKY---PLLADFKKEIATSYGVLI-----E--S--A-GIPLRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~f---pllsD~~~~vak~ygv~~-----~--~--~-G~~~ratfiID~~G~V~~~~~~ 70 (105)
.++.+++|+++ .+++| ++++|.+++++++|++.. . . . ....|++||||++|+|++++.+
T Consensus 83 ~~~~~~~~~~~--------~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g 154 (174)
T 1xzo_A 83 KPKQLKKFAAN--------YPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNG 154 (174)
T ss_dssp CHHHHHHHHTT--------SCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEES
T ss_pred CHHHHHHHHHH--------cCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcC
Confidence 35678888865 26788 999999999988886410 0 0 0 1357899999999999999987
Q ss_pred cCCCCCCHHHHHHHHHhhh
Q psy13875 71 DLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 71 ~~~~~~~~~eil~~l~~l~ 89 (105)
... .+.+++++.|++|.
T Consensus 155 ~~~--~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 155 VEN--TPYDDIISDVKSAS 171 (174)
T ss_dssp SSS--CCHHHHHHHHHHHT
T ss_pred CCC--CCHHHHHHHHHHHH
Confidence 542 46889999888764
No 59
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.81 E-value=2.5e-08 Score=63.92 Aligned_cols=63 Identities=17% Similarity=0.452 Sum_probs=51.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
.+..++|.++ .+++||+++|.++.+++.||+. ..|++||||++|+|++.+.+.. +.+++.+.
T Consensus 82 ~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~ 143 (145)
T 3erw_A 82 QQVVEDFIKA--------NKLTFPIVLDSKGELMKEYHII------TIPTSFLLNEKGEIEKTKIGPM----TAEQLKEW 143 (145)
T ss_dssp HHHHHHHHHH--------TTCCSCEEECSSSHHHHHTTCC------EESEEEEECTTCCEEEEEESCC----CHHHHHHH
T ss_pred HHHHHHHHHH--------cCCceeEEEcCchhHHHhcCcC------ccCeEEEEcCCCcEEEEEcCCc----CHHHHHHh
Confidence 4566777766 2789999999999999999987 3799999999999999998743 56677665
Q ss_pred H
Q psy13875 85 V 85 (105)
Q Consensus 85 l 85 (105)
|
T Consensus 144 l 144 (145)
T 3erw_A 144 T 144 (145)
T ss_dssp H
T ss_pred h
Confidence 5
No 60
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.81 E-value=1.5e-08 Score=68.48 Aligned_cols=72 Identities=15% Similarity=0.285 Sum_probs=56.8
Q ss_pred HHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
+..++|+++. ++ .||+++|.++.+++.||+.... ...|++||||++|+|++.+.+.. ..+.+++++.
T Consensus 107 ~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~--~~~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~ 174 (186)
T 1jfu_A 107 EKPKTFLKEA--------NLTRLGYFNDQKAKVFQDLKAIGRA--LGMPTSVLVDPQGCEIATIAGPA--EWASEDALKL 174 (186)
T ss_dssp THHHHHHHHT--------TCCTTCCEECTTCHHHHHHHTTTCC--SSSSEEEEECTTSBEEEEEESCC--CTTSHHHHHH
T ss_pred HHHHHHHHHc--------CCCCCceEECCcchHHHHhcccccc--CCCCEEEEECCCCCEEEEEecCC--ccCHHHHHHH
Confidence 5678898762 56 5999999999999999986321 24799999999999999998753 2356788888
Q ss_pred HHhhh
Q psy13875 85 VKAFQ 89 (105)
Q Consensus 85 l~~l~ 89 (105)
|+++.
T Consensus 175 l~~ll 179 (186)
T 1jfu_A 175 IRAAT 179 (186)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
No 61
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.81 E-value=8e-09 Score=68.30 Aligned_cols=61 Identities=23% Similarity=0.440 Sum_probs=50.7
Q ss_pred CCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhhhh
Q psy13875 24 DLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQFVD 92 (105)
Q Consensus 24 ~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~~ 92 (105)
+++||+++|.++.+++.||+. ..|++||||++|+|++.+.|.. ..+..++++.+.+.+...
T Consensus 94 ~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~G~~--~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 94 PVSFNFLSDATGQVQQRYGAN------RLPDTFIVDRKGIIRQRVTGGI--EWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp CCSCEEEECTTSHHHHHTTCC------SSSEEEEECTTSBEEEEEESCC--CTTSHHHHHHHHTTC---
T ss_pred CCCceEEECchHHHHHHhCCC------CcceEEEEcCCCCEEEEEeCCC--ccchHHHHHHHHhhcccc
Confidence 779999999999999999987 3699999999999999998764 346788888888766543
No 62
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.80 E-value=9.4e-09 Score=69.73 Aligned_cols=66 Identities=18% Similarity=0.380 Sum_probs=51.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCce-EEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYP-LLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fp-llsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
++..++|+++. +++|+ +++|.++.+++.||+. + .|++||||++|+|++.+.+.. +.+++.+
T Consensus 99 ~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~~~l~~ 160 (176)
T 3kh7_A 99 NAAAIKWLNEL--------HNPYLLSISDADGTLGLDLGVY----G--APETYLIDKQGIIRHKIVGVV----DQKVWRE 160 (176)
T ss_dssp HHHHHHHHHHT--------TCCCSEEEEETTCHHHHHHTCC----S--SCEEEEECTTCBEEEEEESCC----CHHHHHH
T ss_pred HHHHHHHHHHc--------CCCCceEEECCcchHHHHcCCC----C--CCeEEEECCCCeEEEEEcCCC----CHHHHHH
Confidence 45677888762 67888 5899999999999987 3 699999999999999998754 4555555
Q ss_pred HHHhh
Q psy13875 84 LVKAF 88 (105)
Q Consensus 84 ~l~~l 88 (105)
.|+++
T Consensus 161 ~l~~~ 165 (176)
T 3kh7_A 161 QLAPL 165 (176)
T ss_dssp HTHHH
T ss_pred HHHHH
Confidence 55443
No 63
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.80 E-value=2.1e-08 Score=68.01 Aligned_cols=69 Identities=20% Similarity=0.337 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCC------CCCCH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLP------VGRSV 78 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~------~~~~~ 78 (105)
.+..++|+++. +++||+++|.++++++.||+. ..|++||||++|+|++. +... ...+.
T Consensus 84 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~--g~~~~~~~~~g~~~~ 147 (188)
T 2cvb_A 84 PEKMAAFAEEH--------GIFFPYLLDETQEVAKAYRAL------RTPEVFLFDERRLLRYH--GRVNDNPKDPSKVQS 147 (188)
T ss_dssp HHHHHHHHHHH--------TCCSCEEECSSSHHHHHTTCC------EESEEEEECTTCBEEEE--ECSSSCTTCGGGCCC
T ss_pred HHHHHHHHHHh--------CCCceEEECCcchHHHHcCCC------CCCeEEEECCCCcEEEE--EecCCccccccccCH
Confidence 46778888773 679999999999999999987 36999999999999988 3221 11245
Q ss_pred HHHHHHHHhhh
Q psy13875 79 EEVLRLVKAFQ 89 (105)
Q Consensus 79 ~eil~~l~~l~ 89 (105)
+++.+.|+++.
T Consensus 148 ~~l~~~i~~ll 158 (188)
T 2cvb_A 148 HDLEAAIEALL 158 (188)
T ss_dssp CHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66777777654
No 64
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.78 E-value=1.3e-08 Score=66.47 Aligned_cols=70 Identities=20% Similarity=0.153 Sum_probs=56.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEee---CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLAD---FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEV 81 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD---~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~ei 81 (105)
.+..++|+++ .+++||+++| .+..+++.||+. ..|++||||++|+|++.+.+.. +.+++
T Consensus 74 ~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l 135 (154)
T 3ia1_A 74 REVVLEYMKT--------YPRFIPLLASDRDRPHEVAARFKVL------GQPWTFVVDREGKVVALFAGRA----GREAL 135 (154)
T ss_dssp HHHHHHHHTT--------CTTEEECBCCSSCCHHHHHTTSSBC------SSCEEEEECTTSEEEEEEESBC----CHHHH
T ss_pred HHHHHHHHHH--------cCCCcccccccccchHHHHHHhCCC------cccEEEEECCCCCEEEEEcCCC----CHHHH
Confidence 4456677755 2779999998 778999999987 3699999999999999998743 68888
Q ss_pred HHHHHhhhhhh
Q psy13875 82 LRLVKAFQFVD 92 (105)
Q Consensus 82 l~~l~~l~~~~ 92 (105)
.+.|+++....
T Consensus 136 ~~~l~~~~~~~ 146 (154)
T 3ia1_A 136 LDALLLAGADL 146 (154)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHhccCcc
Confidence 88888876433
No 65
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.76 E-value=3.6e-08 Score=64.23 Aligned_cols=67 Identities=15% Similarity=0.262 Sum_probs=55.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
.+..++|+++. +++|+++.|.+..+++.||+. + .|++||||++|+|++.+.+. .+.+++++.
T Consensus 74 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~i~----~--~P~~~lid~~G~i~~~~~g~----~~~~~l~~~ 135 (153)
T 2l5o_A 74 IESVRQYVKDY--------GLPFTVMYDADKAVGQAFGTQ----V--YPTSVLIGKKGEILKTYVGE----PDFGKLYQE 135 (153)
T ss_dssp HHHHHHHHHHT--------TCCSEEEECSSCHHHHHHTCC----S--SSEEEEECSSSCCCEEEESS----CCHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEcCchHHHHHHcCCC----c--cCeEEEECCCCcEEEEEcCC----CCHHHHHHH
Confidence 35567787662 778999999999999999987 3 69999999999999998864 368888888
Q ss_pred HHhhh
Q psy13875 85 VKAFQ 89 (105)
Q Consensus 85 l~~l~ 89 (105)
|+++.
T Consensus 136 l~~ll 140 (153)
T 2l5o_A 136 IDTAW 140 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 66
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.75 E-value=5.3e-08 Score=65.72 Aligned_cols=70 Identities=16% Similarity=0.226 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
++..++|+++. +++||+++|.++.+++.||.+.. ...|++||||++|+|++.+.+.. +.+++.+.
T Consensus 111 ~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~ 175 (183)
T 3lwa_A 111 RDIAQDFVTDN--------GLDYPSIYDPPFMTAASLGGVPA---SVIPTTIVLDKQHRPAAVFLREV----TSKDVLDV 175 (183)
T ss_dssp HHHHHHHHHHT--------TCCSCEEECTTCGGGGGTTTCCT---TCCSEEEEECTTSCEEEEECSCC----CHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCccEEECCcchHHHHhccCCC---CCCCeEEEECCCCcEEEEEcCCC----CHHHHHHH
Confidence 45678888762 78999999999999999985311 14799999999999999988643 67888888
Q ss_pred HHhhh
Q psy13875 85 VKAFQ 89 (105)
Q Consensus 85 l~~l~ 89 (105)
|+++.
T Consensus 176 l~~ll 180 (183)
T 3lwa_A 176 ALPLV 180 (183)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 67
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=4e-08 Score=64.28 Aligned_cols=63 Identities=14% Similarity=0.303 Sum_probs=50.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCCceEEeeC---cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDLKYPLLADF---KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVL 82 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l~fpllsD~---~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil 82 (105)
+..++|+++ .+++||+++|. ++.+++.||+. ..|++||||++|+|++.+. +.+++.
T Consensus 82 ~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l~ 140 (150)
T 3fw2_A 82 QQWKDAIKR--------DTLDWEQVCDFGGLNSEVAKQYSIY------KIPANILLSSDGKILAKNL-------RGEELK 140 (150)
T ss_dssp HHHHHHHHH--------TTCCSEEECCSCGGGCHHHHHTTCC------SSSEEEEECTTSBEEEESC-------CHHHHH
T ss_pred HHHHHHHHH--------hCCCceEEEcCcccchHHHHHcCCC------ccCeEEEECCCCEEEEccC-------CHHHHH
Confidence 456677765 27899999999 67999999987 3699999999999999874 566677
Q ss_pred HHHHhhh
Q psy13875 83 RLVKAFQ 89 (105)
Q Consensus 83 ~~l~~l~ 89 (105)
+.|+++.
T Consensus 141 ~~l~~ll 147 (150)
T 3fw2_A 141 KKIENIV 147 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776643
No 68
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.73 E-value=4.1e-08 Score=64.59 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=53.5
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEe---eCcchHHhhhCCcccc-----CC----ccceeEEEECCCCCEEEEEeccC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLA---DFKKEIATSYGVLIES-----AG----IPLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fplls---D~~~~vak~ygv~~~~-----~G----~~~ratfiID~~G~V~~~~~~~~ 72 (105)
++..++|+++. +++|++++ |..+.++++||+.... .+ ...+++||||++|+|++.+.+..
T Consensus 76 ~~~~~~~~~~~--------~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~ 147 (164)
T 2ggt_A 76 KEAIANYVKEF--------SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK 147 (164)
T ss_dssp HHHHHHHHHTT--------CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC
T ss_pred HHHHHHHHHHc--------CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC
Confidence 56788898762 67899994 6667899999986311 00 01238999999999999987643
Q ss_pred CCCCCHHHHHHHHHhhh
Q psy13875 73 PVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 73 ~~~~~~~eil~~l~~l~ 89 (105)
+.+++++.|+++.
T Consensus 148 ----~~~~l~~~l~~ll 160 (164)
T 2ggt_A 148 ----RKGEIAASIATHM 160 (164)
T ss_dssp ----CHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHH
Confidence 5788888887764
No 69
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.71 E-value=1.2e-07 Score=59.95 Aligned_cols=65 Identities=18% Similarity=0.308 Sum_probs=52.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
....++|.++. ++ +||+++|.+..+++.||+. + .|++||||++|+|+ .+.+.. +.+++.+
T Consensus 68 ~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~i~----~--~P~~~~id~~g~i~-~~~g~~----~~~~l~~ 128 (136)
T 1zzo_A 68 VPAMQEFVNKY--------PVKTFTQLADTDGSVWANFGVT----Q--QPAYAFVDPHGNVD-VVRGRM----SQDELTR 128 (136)
T ss_dssp HHHHHHHHHHT--------TCTTSEEEECTTCHHHHHTTCC----S--SSEEEEECTTCCEE-EEESCC----CHHHHHH
T ss_pred HHHHHHHHHHc--------CCCceEEEEcCCcHHHHHcCCC----C--CceEEEECCCCCEE-EEecCC----CHHHHHH
Confidence 34567777652 66 8999999999999999986 3 69999999999999 777643 5788888
Q ss_pred HHHhh
Q psy13875 84 LVKAF 88 (105)
Q Consensus 84 ~l~~l 88 (105)
.|+++
T Consensus 129 ~l~~~ 133 (136)
T 1zzo_A 129 RVTAL 133 (136)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 70
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.71 E-value=9.3e-08 Score=63.39 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=55.5
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCc---chHHhhhCCccccC-----C----ccceeEEEECCCCCEEEEEecc
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFK---KEIATSYGVLIESA-----G----IPLRGLFIIDTKGVLRQITVND 71 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~---~~vak~ygv~~~~~-----G----~~~ratfiID~~G~V~~~~~~~ 71 (105)
.++..++|+++. +++|++|+|.. +.++++||+..... + ...|++||||++|+|++++.+.
T Consensus 78 ~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 149 (171)
T 2rli_A 78 DVEAMARYVQDF--------HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS 149 (171)
T ss_dssp CHHHHHHHHHTT--------CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS
T ss_pred CHHHHHHHHHHc--------CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC
Confidence 356788898762 67899998753 58999999873210 0 1245999999999999998764
Q ss_pred CCCCCCHHHHHHHHHhhhh
Q psy13875 72 LPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 72 ~~~~~~~~eil~~l~~l~~ 90 (105)
. +.+++++.|+++..
T Consensus 150 ~----~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 150 R----SAEQISDSVRRHMA 164 (171)
T ss_dssp C----CHHHHHHHHHHHHH
T ss_pred C----CHHHHHHHHHHHHH
Confidence 3 67888888887654
No 71
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.70 E-value=1.3e-08 Score=67.50 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=57.4
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCc---chHHhhhCCccccC--------C-ccceeEEEECCCCCEEEEEecc
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFK---KEIATSYGVLIESA--------G-IPLRGLFIIDTKGVLRQITVND 71 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~---~~vak~ygv~~~~~--------G-~~~ratfiID~~G~V~~~~~~~ 71 (105)
.++..++|+++. +++||+++|.+ +.++++||+..... + ...|++|||| +|+|++.+.+.
T Consensus 86 ~~~~~~~~~~~~--------~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~ 156 (172)
T 2k6v_A 86 PPEVADRYAKAF--------HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPD 156 (172)
T ss_dssp CHHHHHHHHHHH--------CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHH
T ss_pred CHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCC
Confidence 356788999873 67999999998 78999999864311 1 1479999999 99999999864
Q ss_pred CCCCCCHHHHHHHHHhh
Q psy13875 72 LPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 72 ~~~~~~~~eil~~l~~l 88 (105)
. ..+.+++++.|+++
T Consensus 157 ~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 157 K--AEATDRVVADLQAL 171 (172)
T ss_dssp H--HTCHHHHHHHHHHC
T ss_pred C--CCCHHHHHHHHHHh
Confidence 3 23688888888765
No 72
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.69 E-value=8.5e-08 Score=63.66 Aligned_cols=66 Identities=24% Similarity=0.379 Sum_probs=51.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCce-EEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYP-LLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fp-llsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
++..++|.++. +++|| ++.|.++.+++.||+. + .|++||||++|+|++.+.+.. +.+++.+
T Consensus 92 ~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~~~l~~ 153 (168)
T 2b1k_A 92 RQKAISWLKEL--------GNPYALSLFDGDGMLGLDLGVY----G--APETFLIDGNGIIRYRHAGDL----NPRVWEE 153 (168)
T ss_dssp HHHHHHHHHHH--------CCCCSEEEEETTCHHHHHHTCC----S--SSEEEEECTTSBEEEEEESCC----CHHHHHH
T ss_pred hHHHHHHHHHc--------CCCCceeeECcchHHHHHcCcc----c--cCEEEEECCCCeEEEEEeCCC----CHHHHHH
Confidence 35678888763 67888 6799999999999987 3 699999999999999998744 4566655
Q ss_pred HHHhh
Q psy13875 84 LVKAF 88 (105)
Q Consensus 84 ~l~~l 88 (105)
.|+.+
T Consensus 154 ~l~~~ 158 (168)
T 2b1k_A 154 EIKPL 158 (168)
T ss_dssp TTHHH
T ss_pred HHHHH
Confidence 55543
No 73
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.69 E-value=1.2e-07 Score=61.71 Aligned_cols=66 Identities=12% Similarity=0.255 Sum_probs=52.7
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCce-EEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYP-LLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fp-llsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
.+..++|+++. +++|| ++.|.+..+++.||+. + .|++||||++|+|++.+.+.. +.+++.+
T Consensus 84 ~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~~id~~G~i~~~~~g~~----~~~~l~~ 145 (156)
T 1kng_A 84 ADNARRFLGRY--------GNPFGRVGVDANGRASIEWGVY----G--VPETFVVGREGTIVYKLVGPI----TPDNLRS 145 (156)
T ss_dssp HHHHHHHHHHH--------CCCCSEEEEETTSHHHHHTTCC----S--SCEEEEECTTSBEEEEEESCC----CHHHHHH
T ss_pred HHHHHHHHHHc--------CCCCceeeeCchhHHHHhcCcC----c--cCeEEEEcCCCCEEEEEeCCC----CHHHHHH
Confidence 34567787663 67999 8899999999999987 3 699999999999999988643 5666766
Q ss_pred HHHhh
Q psy13875 84 LVKAF 88 (105)
Q Consensus 84 ~l~~l 88 (105)
.|+++
T Consensus 146 ~l~~~ 150 (156)
T 1kng_A 146 VLLPQ 150 (156)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 66654
No 74
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.68 E-value=4e-08 Score=69.67 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCC---ccceeEEEECCCCCEEEEEeccCC---CC-CC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAG---IPLRGLFIIDTKGVLRQITVNDLP---VG-RS 77 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G---~~~ratfiID~~G~V~~~~~~~~~---~~-~~ 77 (105)
++++++|.+.... .....+++|+|.+++++++||+.....+ .+.|.++||| ||+|.+.++.+.+ .. ..
T Consensus 117 ~FVm~AW~k~~~~----~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~vE~~pg~~~~vS~ 191 (199)
T 4h86_A 117 PFANQAWAKSLGV----KDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAAKETNPGTDVTVSS 191 (199)
T ss_dssp HHHHHHHHHHTTC----CCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEEECSSTTTCCSTTS
T ss_pred HHHHHHHHHHhcc----cccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEEEeCCCCCCCcccC
Confidence 6899999987421 1245799999999999999998654322 2679999998 9999999985432 11 24
Q ss_pred HHHHHHH
Q psy13875 78 VEEVLRL 84 (105)
Q Consensus 78 ~~eil~~ 84 (105)
.+.+|+.
T Consensus 192 ae~vL~~ 198 (199)
T 4h86_A 192 VESVLAH 198 (199)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 6666543
No 75
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.64 E-value=1.3e-07 Score=60.91 Aligned_cols=53 Identities=11% Similarity=0.169 Sum_probs=43.2
Q ss_pred CCCceEEeeCcchHHh--hhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLLADFKKEIAT--SYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpllsD~~~~vak--~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+++||++.|.++.++. .||+. ..|++||||++|+|++. ..+.+++.+.|++++
T Consensus 86 ~~~~~~~~d~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~-------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 86 PQGWIVGWNKAGDIRTRQLYDIR------ATPTIYLLDGRKRVILK-------DTSMEQLIDYLATQA 140 (142)
T ss_dssp CTTCEEEECTTCHHHHTTCSCCC------SSSEEEEECTTCBEEEC-------SCCHHHHHHHHHC--
T ss_pred CCCcceeeCCccchhhHHHcCCC------CCCeEEEECCCCCEEec-------CCCHHHHHHHHHHHc
Confidence 7899999999999977 99987 36999999999999872 236788888887754
No 76
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.64 E-value=1.5e-07 Score=61.93 Aligned_cols=56 Identities=16% Similarity=0.283 Sum_probs=47.7
Q ss_pred CCC-ceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLK-YPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~-fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+++ |+++.|.+..+++.||+. + .|++||||++|+|++.+.+.. +.+++.+.|+++.
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~~----~~~~l~~~i~~~~ 155 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNIS----V--YPSWALIGKDGDVQRIVKGSI----NEAQALALIRNPN 155 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTCC----S--SSEEEEECTTSCEEEEEESCC----CHHHHHHHHHCTT
T ss_pred CCCcceEEEcCchHHHHHcCCC----c--cceEEEECCCCcEEEEEcCCC----CHHHHHHHHHHHH
Confidence 566 899999999999999987 3 699999999999999988643 6788888887764
No 77
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.63 E-value=9.6e-08 Score=61.44 Aligned_cols=65 Identities=12% Similarity=0.217 Sum_probs=51.4
Q ss_pred HHHHHHHHhhhcCCCCCCCCC-ceEEeeCcch--HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDLK-YPLLADFKKE--IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVL 82 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l~-fpllsD~~~~--vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil 82 (105)
+..++|.++. +++ |++++|.++. +++.||+. ..|++||||++|+|++.+.+. .+.++++
T Consensus 77 ~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~~g~----~~~~~~l 138 (148)
T 3hcz_A 77 EEWLKFIRSK--------KIGGWLNVRDSKNHTDFKITYDIY------ATPVLYVLDKNKVIIAKRIGY----ENLDDFL 138 (148)
T ss_dssp HHHHHHHHHH--------TCTTSEEEECTTCCCCHHHHHCCC------SSCEEEEECTTCBEEEESCCG----GGHHHHH
T ss_pred HHHHHHHHHc--------CCCCceEEeccccchhHHHhcCcC------CCCEEEEECCCCcEEEecCCH----HHHHHHH
Confidence 4567777663 566 9999999988 99999987 369999999999999988653 3677777
Q ss_pred HHHHhh
Q psy13875 83 RLVKAF 88 (105)
Q Consensus 83 ~~l~~l 88 (105)
+.+.++
T Consensus 139 ~~l~~~ 144 (148)
T 3hcz_A 139 VQYEKS 144 (148)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766553
No 78
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.62 E-value=9.5e-08 Score=62.56 Aligned_cols=53 Identities=13% Similarity=0.270 Sum_probs=42.4
Q ss_pred CCCceEEeeC---cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLLADF---KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpllsD~---~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+++||+++|. +..+++.||+. ..|++||||++|+|++.+.. .+++.+.|+++.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~-------~~~l~~~l~~l~ 140 (152)
T 2lrn_A 85 KSYWNQVLLQKDDVKDVLESYCIV------GFPHIILVDPEGKIVAKELR-------GDDLYNTVEKFV 140 (152)
T ss_dssp TCCSEEEEECHHHHHHHHHHTTCC------SSCEEEEECTTSEEEEECCC-------TTHHHHHHHHHH
T ss_pred CCCCeEEecccchhHHHHHHhCCC------cCCeEEEECCCCeEEEeeCC-------HHHHHHHHHHHH
Confidence 7799999999 78999999987 36999999999999998742 235555565543
No 79
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.55 E-value=3.5e-07 Score=60.43 Aligned_cols=66 Identities=14% Similarity=0.213 Sum_probs=52.1
Q ss_pred chHHHHHHHHhhhcCCCCCCCC-CceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHH
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDL-KYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVL 82 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l-~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil 82 (105)
..+..++|.++. ++ +||+++| ++++++.||+. + .|++||||++|+|++ .+.. .+.+++.
T Consensus 97 ~~~~~~~~~~~~--------~~~~~~~~~d-~~~~~~~~~v~----~--~P~~~lid~~G~i~~--~g~~---~~~~~l~ 156 (165)
T 3ha9_A 97 TPEMFRKFIANY--------GDPSWIMVMD-DGSLVEKFNVR----S--IDYIVIMDKSSNVLY--AGTT---PSLGELE 156 (165)
T ss_dssp CHHHHHHHHHHH--------SCTTSEEEEC-CSHHHHHTTCC----S--SSEEEEEETTCCEEE--EEES---CCHHHHH
T ss_pred CHHHHHHHHHHc--------CCCCeeEEeC-hHHHHHHhCCC----C--ceEEEEEcCCCcEEE--eCCC---CCHHHHH
Confidence 345677888763 67 9999999 99999999987 3 699999999999999 4433 1577888
Q ss_pred HHHHhhh
Q psy13875 83 RLVKAFQ 89 (105)
Q Consensus 83 ~~l~~l~ 89 (105)
+.|+++.
T Consensus 157 ~~l~~l~ 163 (165)
T 3ha9_A 157 SVIKSVQ 163 (165)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 8887754
No 80
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.54 E-value=3e-07 Score=59.09 Aligned_cols=62 Identities=19% Similarity=0.307 Sum_probs=49.4
Q ss_pred HHHHHHHhhhcCCCCCCCCCceEEeeC---cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHH
Q psy13875 7 GDEVWLEDVKQGDGGLGDLKYPLLADF---KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLR 83 (105)
Q Consensus 7 sh~~w~~~~~~~~~~~~~l~fpllsD~---~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~ 83 (105)
..++|+++ .+++||+++|. +..+++.||+. ..|++||||++|+|++.+. +.+++.+
T Consensus 81 ~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l~~ 139 (148)
T 3fkf_A 81 AWETAIKK--------DTLSWDQVCDFTGLSSETAKQYAIL------TLPTNILLSPTGKILARDI-------QGEALTG 139 (148)
T ss_dssp HHHHHHHH--------TTCCSEEECCSCGGGCHHHHHTTCC------SSSEEEEECTTSBEEEESC-------CHHHHHH
T ss_pred HHHHHHHH--------cCCCceEEEccCCcchHHHHhcCCC------CcCEEEEECCCCeEEEecC-------CHHHHHH
Confidence 45566655 27899999999 77999999987 3699999999999998764 5777777
Q ss_pred HHHhhh
Q psy13875 84 LVKAFQ 89 (105)
Q Consensus 84 ~l~~l~ 89 (105)
.|+++.
T Consensus 140 ~l~~ll 145 (148)
T 3fkf_A 140 KLKELL 145 (148)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 776653
No 81
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.54 E-value=4.8e-07 Score=59.35 Aligned_cols=72 Identities=18% Similarity=0.282 Sum_probs=53.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
....++|+++. +++||++.|.. ++++.|+......-...|++||||++|+|++.+.+.. +.+++.+.
T Consensus 79 ~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~ 145 (165)
T 3or5_A 79 LPNVKNYMKTQ--------GIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPR----SKADFDRI 145 (165)
T ss_dssp HHHHHHHHHHH--------TCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCC----CHHHHHHH
T ss_pred HHHHHHHHHHc--------CCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCC----CHHHHHHH
Confidence 34567777663 78999999976 8999995443211124799999999999999887643 57777777
Q ss_pred HHhhh
Q psy13875 85 VKAFQ 89 (105)
Q Consensus 85 l~~l~ 89 (105)
|+++-
T Consensus 146 l~~~l 150 (165)
T 3or5_A 146 VKMAL 150 (165)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 82
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.52 E-value=2.9e-07 Score=59.63 Aligned_cols=61 Identities=18% Similarity=0.154 Sum_probs=46.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCCc-eEEeeCc---chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHH
Q psy13875 6 EGDEVWLEDVKQGDGGLGDLKY-PLLADFK---KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEV 81 (105)
Q Consensus 6 ~sh~~w~~~~~~~~~~~~~l~f-pllsD~~---~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~ei 81 (105)
+..++|+++. +++| ++++|.+ +.+++.||+. ..|++||||++|+|++... ..+++
T Consensus 78 ~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l 136 (143)
T 4fo5_A 78 SIFTETVKID--------KLDLSTQFHEGLGKESELYKKYDLR------KGFKNFLINDEGVIIAANV-------TPEKL 136 (143)
T ss_dssp HHHHHHHHHH--------TCCGGGEEECTTGGGSHHHHHTTGG------GCCCEEEECTTSBEEEESC-------CHHHH
T ss_pred HHHHHHHHHh--------CCCCceeeecccccchHHHHHcCCC------CCCcEEEECCCCEEEEccC-------CHHHH
Confidence 4556666552 7899 8899984 6899999987 4699999999999998764 35566
Q ss_pred HHHHHh
Q psy13875 82 LRLVKA 87 (105)
Q Consensus 82 l~~l~~ 87 (105)
.+.|++
T Consensus 137 ~~~l~~ 142 (143)
T 4fo5_A 137 TEILKA 142 (143)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 655554
No 83
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.45 E-value=9.4e-07 Score=59.58 Aligned_cols=80 Identities=5% Similarity=0.015 Sum_probs=54.8
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEE--ee--CcchHHhhhCCcccc--CC-ccceeEEEECCCCCEEEEEeccCCCCC
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLL--AD--FKKEIATSYGVLIES--AG-IPLRGLFIIDTKGVLRQITVNDLPVGR 76 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpll--sD--~~~~vak~ygv~~~~--~G-~~~ratfiID~~G~V~~~~~~~~~~~~ 76 (105)
.++..++|+++. ++....++++ .| ...+++++||+.... .+ ...|++||||++|+|++++.+. ..
T Consensus 77 ~~~~~~~~~~~~-----~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~---~~ 148 (170)
T 3me7_A 77 TLEDIKRFQKEY-----GIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGV---NY 148 (170)
T ss_dssp CHHHHHHHHHHT-----TCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESS---SC
T ss_pred CHHHHHHHHHHc-----CCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCC---CC
Confidence 467889999873 2212233343 33 347899999875321 11 2468999999999999998764 34
Q ss_pred CHHHHHHHHHhhhhh
Q psy13875 77 SVEEVLRLVKAFQFV 91 (105)
Q Consensus 77 ~~~eil~~l~~l~~~ 91 (105)
+.+++++.|+++...
T Consensus 149 ~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 149 NYLEFVNALRLARGE 163 (170)
T ss_dssp CHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhhcc
Confidence 699999999887653
No 84
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=2.4e-08 Score=65.83 Aligned_cols=58 Identities=19% Similarity=0.309 Sum_probs=43.1
Q ss_pred CCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
+++||+++|.++.++++||+... | .|++||||++|+|++.+.+. . ..+.+++++.|.+
T Consensus 91 ~~~~~~~~d~~~~~~~~~~~~~~--~--~P~~~lid~~G~i~~~~~g~-~-~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 91 GVTYPLGLDPGADIFAKYALRDA--G--ITRNVLIDREGKIVKLTRLY-N-EEEFASLVQQINE 148 (159)
Confidence 77999999999999999996421 3 69999999999999988752 1 2234444444433
No 85
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.43 E-value=3e-07 Score=63.53 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=53.9
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEee---CcchHHhhhCCcccc-----CC-----ccceeEEEECCCCCEEEEEec
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLAD---FKKEIATSYGVLIES-----AG-----IPLRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD---~~~~vak~ygv~~~~-----~G-----~~~ratfiID~~G~V~~~~~~ 70 (105)
.++.+++|+++. +++|++|++ ..+.++++||+.... .| ...|++||||++|+|++.+.+
T Consensus 92 ~~~~~~~~~~~~--------~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g 163 (200)
T 2b7k_A 92 SPAVLKEYLSDF--------HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGR 163 (200)
T ss_dssp CHHHHHHHHTTS--------CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECT
T ss_pred CHHHHHHHHHHc--------CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCC
Confidence 456788888652 578888874 357899999987210 01 125799999999999999876
Q ss_pred cCCCCCCHHHHHHHHHhhhh
Q psy13875 71 DLPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 71 ~~~~~~~~~eil~~l~~l~~ 90 (105)
..+.....+++.+.|+++..
T Consensus 164 ~~~~~~~~~~i~~~l~~l~~ 183 (200)
T 2b7k_A 164 NYDEKTGVDKIVEHVKSYVP 183 (200)
T ss_dssp TCCTTHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHHHHHhhh
Confidence 55444445666677776654
No 86
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.43 E-value=5.1e-07 Score=58.57 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=50.8
Q ss_pred HHHHHHHhhhcCCCCCCCCC-ceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHH
Q psy13875 7 GDEVWLEDVKQGDGGLGDLK-YPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLV 85 (105)
Q Consensus 7 sh~~w~~~~~~~~~~~~~l~-fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l 85 (105)
..++|+++. +++ +++++|.++.+++.||+. + .|++||||++|+|++.+.+. .+.+++.+.|
T Consensus 77 ~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~v~----~--~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l 138 (152)
T 2lja_A 77 AWENMVTKD--------QLKGIQLHMGTDRTFMDAYLIN----G--IPRFILLDRDGKIISANMTR----PSDPKTAEKF 138 (152)
T ss_dssp HHHHHHHHH--------TCCSEEEECSSCTHHHHHTTCC----S--SCCEEEECTTSCEEESSCCC----TTCHHHHHHH
T ss_pred HHHHHHHhc--------CCCCceeecCcchhHHHHcCcC----C--CCEEEEECCCCeEEEccCCC----CCHHHHHHHH
Confidence 456666552 344 578889999999999987 3 69999999999999876543 3567788888
Q ss_pred Hhhhhhh
Q psy13875 86 KAFQFVD 92 (105)
Q Consensus 86 ~~l~~~~ 92 (105)
+.+....
T Consensus 139 ~~~~~~~ 145 (152)
T 2lja_A 139 NELLGLE 145 (152)
T ss_dssp HHHHTCC
T ss_pred HHHhccc
Confidence 7765433
No 87
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.38 E-value=1.3e-06 Score=56.34 Aligned_cols=50 Identities=10% Similarity=0.133 Sum_probs=40.8
Q ss_pred CCCceEEeeCcch--HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 24 DLKYPLLADFKKE--IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 24 ~l~fpllsD~~~~--vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
+++|+.+.|.++. +++.||+. ..|++||||++|+|++...+ .+++.+.|+
T Consensus 90 ~~~~~~~~d~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~-------~~~l~~~l~ 141 (142)
T 3eur_A 90 AKEWTNGYDKELVIKNKNLYDLR------AIPTLYLLDKNKTVLLKDAT-------LQKVEQYLA 141 (142)
T ss_dssp CTTSEEEECTTCHHHHTTCSCCT------TCSEEEEECTTCBEEEEEEC-------HHHHHHHHH
T ss_pred ccccccccCccchhhhhhhcCCC------cCCeEEEECCCCcEEecCCC-------HHHHHHHHh
Confidence 6789999999875 78999987 36999999999999998763 566666654
No 88
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.37 E-value=6.4e-07 Score=59.01 Aligned_cols=53 Identities=17% Similarity=0.311 Sum_probs=43.0
Q ss_pred CCCceEEeeCcch---HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 24 DLKYPLLADFKKE---IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 24 ~l~fpllsD~~~~---vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
+++||+++|.++. +++.||+. ..|++||||++|+|++.+.+. .+.++.+..+.
T Consensus 89 ~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~e~~~~~~~ 144 (152)
T 2lrt_A 89 NLPWVCVRDANGAYSSYISLYNVT------NLPSVFLVNRNNELSARGENI----KDLDEAIKKLL 144 (152)
T ss_dssp TCSSEEEECSSGGGCHHHHHHTCC------SCSEEEEEETTTEEEEETTTC----SCHHHHHHHHH
T ss_pred CCCceEEECCCCcchHHHHHcCcc------cCceEEEECCCCeEEEecCCH----HHHHHHHHHHH
Confidence 5789999999987 99999987 369999999999999988753 35666655443
No 89
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.35 E-value=1.2e-06 Score=59.82 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=49.3
Q ss_pred chHHHHHHH-HhhhcCCCCCCCCCceEEe--eCcchHHh-h--------hCCccccCCccce------eEEEECCCCCEE
Q psy13875 4 VDEGDEVWL-EDVKQGDGGLGDLKYPLLA--DFKKEIAT-S--------YGVLIESAGIPLR------GLFIIDTKGVLR 65 (105)
Q Consensus 4 ~~~sh~~w~-~~~~~~~~~~~~l~fplls--D~~~~vak-~--------ygv~~~~~G~~~r------atfiID~~G~V~ 65 (105)
.++..++|+ ++. +++||+++ |.++.+++ . ||+. | .| ++||||++|+|+
T Consensus 99 ~~~~~~~~~~~~~--------~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~----~--~P~i~~~~~~~lid~~G~i~ 164 (190)
T 2vup_A 99 NEEEIKEFVCTKF--------KAEFPIMAKINVNGENAHPLYEYMKKTKPGIL----K--TKAIKWNFTSFLIDRDGVPV 164 (190)
T ss_dssp CHHHHHHHHHHHH--------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGG----G--CCSCCSTTCEEEECTTSCEE
T ss_pred CHHHHHHHHHHhc--------CCCeEEEeecccCcccccHHHHHHHhhcCCcC----C--CccccccceEEEECCCCcEE
Confidence 356778888 663 77999997 67776654 2 3544 3 35 999999999999
Q ss_pred EEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 66 QITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 66 ~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.+.+.. +.+++.+.|+++.
T Consensus 165 ~~~~g~~----~~~~l~~~i~~ll 184 (190)
T 2vup_A 165 ERFSPGA----SVKDIEKKLIPLL 184 (190)
T ss_dssp EEECTTC----CHHHHHHHHHHHH
T ss_pred EEECCCC----CHHHHHHHHHHHH
Confidence 9987643 4677777777654
No 90
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.34 E-value=6.5e-07 Score=59.07 Aligned_cols=69 Identities=17% Similarity=0.289 Sum_probs=47.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEE--eeCcchHHh-hh--------CCccccCCccce---eEEEECCCCCEEEEEec
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLL--ADFKKEIAT-SY--------GVLIESAGIPLR---GLFIIDTKGVLRQITVN 70 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpll--sD~~~~vak-~y--------gv~~~~~G~~~r---atfiID~~G~V~~~~~~ 70 (105)
++..++|+++. .+++||++ .|.++.+++ .| |+. +...| ++||||++|+|++.+.+
T Consensus 84 ~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~----~~~~p~~~~~~lid~~G~i~~~~~g 152 (170)
T 2p5q_A 84 NDQITDFVCTR-------FKSEFPIFDKIDVNGENASPLYRFLKLGKWGIF----GDDIQWNFAKFLVNKDGQVVDRYYP 152 (170)
T ss_dssp HHHHHHHHHHH-------TCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTT----CSCCCSTTCEEEECTTSCEEEEECT
T ss_pred HHHHHHHHHHh-------cCCCceeEeeeccCCCchHHHHHHHHhcCCCcc----CCcccccccEEEECCCCCEEEeeCC
Confidence 45678888721 27799999 688877653 33 542 12356 99999999999999986
Q ss_pred cCCCCCCHHHHHHHHHhh
Q psy13875 71 DLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 71 ~~~~~~~~~eil~~l~~l 88 (105)
.. +.+++.+.|+++
T Consensus 153 ~~----~~~~l~~~i~~l 166 (170)
T 2p5q_A 153 TT----SPLSLERDIKQL 166 (170)
T ss_dssp TS----CGGGGHHHHHHH
T ss_pred CC----CHHHHHHHHHHH
Confidence 43 345566666654
No 91
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.32 E-value=5.8e-07 Score=60.83 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=47.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEe--eCcchHHh-hhCCcccc------CC---ccceeEEEECCCCCEEEEEeccC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLA--DFKKEIAT-SYGVLIES------AG---IPLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fplls--D~~~~vak-~ygv~~~~------~G---~~~ratfiID~~G~V~~~~~~~~ 72 (105)
++..++|+++ .+++||+++ |.++..+. .|+.+... .+ ...|++||||++|+|++.+.+..
T Consensus 99 ~~~~~~~~~~--------~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 170 (183)
T 2obi_A 99 NEEIKEFAAG--------YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME 170 (183)
T ss_dssp HHHHHHHHHT--------TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTS
T ss_pred HHHHHHHHHH--------cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCC
Confidence 4678888865 278999998 77777653 45221100 01 12589999999999999987643
Q ss_pred CCCCCHHHHHHHHHhh
Q psy13875 73 PVGRSVEEVLRLVKAF 88 (105)
Q Consensus 73 ~~~~~~~eil~~l~~l 88 (105)
+.+++.+.|+++
T Consensus 171 ----~~~~l~~~i~~l 182 (183)
T 2obi_A 171 ----EPLVIEKDLPHY 182 (183)
T ss_dssp ----CTHHHHTTSGGG
T ss_pred ----CHHHHHHHHHHh
Confidence 446666666543
No 92
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.28 E-value=8.4e-07 Score=60.11 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=47.3
Q ss_pred hHHHHHHHHh-hhcCCCCCCCCCceEEe--eCcchHHh-hh--CCccccCCccce-------eEEEECCCCCEEEEEecc
Q psy13875 5 DEGDEVWLED-VKQGDGGLGDLKYPLLA--DFKKEIAT-SY--GVLIESAGIPLR-------GLFIIDTKGVLRQITVND 71 (105)
Q Consensus 5 ~~sh~~w~~~-~~~~~~~~~~l~fplls--D~~~~vak-~y--gv~~~~~G~~~r-------atfiID~~G~V~~~~~~~ 71 (105)
++..++|+++ . +++||+++ |.++..+. .| ++. ..| ++||||++|+|++.+.+.
T Consensus 101 ~~~~~~~~~~~~--------~~~~p~~~~~d~~g~~~~~~~~~~~~------~~P~~~~~~~~~~lid~~G~i~~~~~g~ 166 (181)
T 2p31_A 101 NKEIESFARRTY--------SVSFPMFSKIAVTGTGAHPAFKYLAQ------TSGKEPTWNFWKYLVAPDGKVVGAWDPT 166 (181)
T ss_dssp HHHHHHHHHHHH--------CCCSCBBCCCCCSSTTSCHHHHHHHH------HHSCCCCSTTCEEEECTTSCEEEEECTT
T ss_pred HHHHHHHHHhhc--------CCCceeEeecccCCccchhhhhhhhh------cCCCccccceeEEEEcCCCCEEEEeCCC
Confidence 4577888876 3 67899996 45565543 33 332 235 999999999999998764
Q ss_pred CCCCCCHHHHHHHHHhh
Q psy13875 72 LPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 72 ~~~~~~~~eil~~l~~l 88 (105)
. +.+++.+.|+++
T Consensus 167 ~----~~~~l~~~i~~l 179 (181)
T 2p31_A 167 V----SVEEVRPQITAL 179 (181)
T ss_dssp S----CHHHHHHHHHTT
T ss_pred C----CHHHHHHHHHHH
Confidence 3 577888888765
No 93
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.28 E-value=1.1e-06 Score=62.30 Aligned_cols=80 Identities=19% Similarity=0.109 Sum_probs=48.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeC--cchHH-hhhCCcccc-------CC--------------c-cceeEEEEC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADF--KKEIA-TSYGVLIES-------AG--------------I-PLRGLFIID 59 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~--~~~va-k~ygv~~~~-------~G--------------~-~~ratfiID 59 (105)
++.+++|++..... .-.+++||+++|. ++..+ ..|+..... .| + -.|++||||
T Consensus 107 ~~~i~~f~~~~~~~--~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID 184 (215)
T 2i3y_A 107 NKEILPGLKYVRPG--GGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVG 184 (215)
T ss_dssp HHHHHHHHHHTSSC--TTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHHHhccch--hccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEEC
Confidence 46789999710000 0027899999875 35432 233321100 01 0 127999999
Q ss_pred CCCCEEEEEeccCCCCCCHHHHHHHHHhhhh
Q psy13875 60 TKGVLRQITVNDLPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 60 ~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~ 90 (105)
++|+|++.+.+.. +.+++.+.|++|..
T Consensus 185 ~~G~vv~~~~g~~----~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 185 PDGIPVMRWSHRA----TVSSVKTDILAYLK 211 (215)
T ss_dssp TTSCEEEEECTTS----CHHHHHHHHHHHGG
T ss_pred CCCeEEEEeCCCC----CHHHHHHHHHHHHH
Confidence 9999999997643 46778888877653
No 94
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.27 E-value=6e-07 Score=60.05 Aligned_cols=65 Identities=17% Similarity=0.286 Sum_probs=37.7
Q ss_pred HHHHHHH-HhhhcCCCCCCCCCceEEeeCc--ch-HHhh--------hCCccccCCccce------eEEEECCCCCEEEE
Q psy13875 6 EGDEVWL-EDVKQGDGGLGDLKYPLLADFK--KE-IATS--------YGVLIESAGIPLR------GLFIIDTKGVLRQI 67 (105)
Q Consensus 6 ~sh~~w~-~~~~~~~~~~~~l~fpllsD~~--~~-vak~--------ygv~~~~~G~~~r------atfiID~~G~V~~~ 67 (105)
+..++|+ ++ .+++||+++|.+ +. +++. ||+. | .| ++||||++|+|++.
T Consensus 84 ~~~~~~~~~~--------~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~----~--~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 84 EEIAQFCQLN--------YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGML----G--LRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSS----S--CCSCCSTTCEEEECSSSCEEEE
T ss_pred HHHHHHHHhc--------cCCCceEEeeccCCCccchHHHHHHHhccCCcC----C--CCcccccceEEEECCCCCEEEE
Confidence 4567777 55 278999998743 44 3333 4443 3 45 99999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHhh
Q psy13875 68 TVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 68 ~~~~~~~~~~~~eil~~l~~l 88 (105)
+.+.. +.+++.+.|+++
T Consensus 150 ~~g~~----~~~~l~~~i~~l 166 (171)
T 3cmi_A 150 YSSLT----KPSSLSETIEEL 166 (171)
T ss_dssp ECTTS----CGGGGHHHHHHH
T ss_pred eCCCC----CHHHHHHHHHHH
Confidence 98644 345556666554
No 95
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.26 E-value=1.3e-06 Score=61.34 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=47.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEeeC--cchHH-hhhCCcccc-------CC--------------c-cceeEEEEC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLADF--KKEIA-TSYGVLIES-------AG--------------I-PLRGLFIID 59 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fpllsD~--~~~va-k~ygv~~~~-------~G--------------~-~~ratfiID 59 (105)
++.+++|++.... +.-.+++||+++|. ++..+ ..|+..... .| + -.|++||||
T Consensus 89 ~~~i~~f~~~~~~--~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID 166 (207)
T 2r37_A 89 NSEILPTLKYVRP--GGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVG 166 (207)
T ss_dssp HHHHHHHHHHTSS--CTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEEC
T ss_pred HHHHHHHHHhcch--hhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEEC
Confidence 4678999971000 00027899999875 35432 233321100 01 1 127999999
Q ss_pred CCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 60 TKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 60 ~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++|+|++++.+.. +.+++.+.|++|.
T Consensus 167 ~~G~i~~~~~g~~----~~~~l~~~I~~ll 192 (207)
T 2r37_A 167 PDGIPIMRWHHRT----TVSNVKMDILSYM 192 (207)
T ss_dssp TTSCEEEEECTTS----CHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCC----CHHHHHHHHHHHH
Confidence 9999999997643 4567777776654
No 96
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.24 E-value=1e-06 Score=59.89 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=45.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCceEEe--eCcchHHh-hhCCcccc------CCc---cceeEEEECCCCCEEEEEeccC
Q psy13875 5 DEGDEVWLEDVKQGDGGLGDLKYPLLA--DFKKEIAT-SYGVLIES------AGI---PLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 5 ~~sh~~w~~~~~~~~~~~~~l~fplls--D~~~~vak-~ygv~~~~------~G~---~~ratfiID~~G~V~~~~~~~~ 72 (105)
++..++|+++. +++||+++ |.++..+. .|+.+... .|. ..|++||||++|+|++.+.+..
T Consensus 101 ~~~~~~~~~~~--------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 172 (185)
T 2gs3_A 101 NEEIKEFAAGY--------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPME 172 (185)
T ss_dssp HHHHHHHHHHT--------TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTS
T ss_pred HHHHHHHHHHc--------CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCC
Confidence 45678898762 78999997 66776554 45321110 011 1489999999999999988643
Q ss_pred CCCCCHHHHHHHHHh
Q psy13875 73 PVGRSVEEVLRLVKA 87 (105)
Q Consensus 73 ~~~~~~~eil~~l~~ 87 (105)
+.+++.+.|++
T Consensus 173 ----~~~~l~~~i~~ 183 (185)
T 2gs3_A 173 ----EPLVIEKDLPH 183 (185)
T ss_dssp ----CGGGGGGGHHH
T ss_pred ----CHHHHHHHHHH
Confidence 33455555544
No 97
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.22 E-value=3e-06 Score=55.78 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=47.3
Q ss_pred hHHHHHH-HHhhhcCCCCCCCCCceEEe--eCcchHHh-hh--------CCccccCCccceeEEEECCCCCEEEEEeccC
Q psy13875 5 DEGDEVW-LEDVKQGDGGLGDLKYPLLA--DFKKEIAT-SY--------GVLIESAGIPLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 5 ~~sh~~w-~~~~~~~~~~~~~l~fplls--D~~~~vak-~y--------gv~~~~~G~~~ratfiID~~G~V~~~~~~~~ 72 (105)
++..++| .++. +++||+++ |.++.++. .| |+.... -...|++||||++|+|++.+.+..
T Consensus 83 ~~~~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~-i~~~P~~~lid~~G~i~~~~~g~~ 153 (169)
T 2v1m_A 83 EAEIKKFVTEKY--------GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNN-IKWNFSKFLVDRQGQPVKRYSPTT 153 (169)
T ss_dssp HHHHHHHHHHHH--------CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCS-CCSTTCEEEECTTSCEEEEECTTS
T ss_pred HHHHHHHHHHhc--------CCCCceEEEEeecCccccHHHHHHHhhcCCccCCc-ccccceEEEECCCCCEEEEcCCCC
Confidence 4577888 4663 78999997 77777654 44 543100 002589999999999999988644
Q ss_pred CCCCCHHHHHHHHHhh
Q psy13875 73 PVGRSVEEVLRLVKAF 88 (105)
Q Consensus 73 ~~~~~~~eil~~l~~l 88 (105)
+.+++.+.|+++
T Consensus 154 ----~~~~l~~~i~~l 165 (169)
T 2v1m_A 154 ----APYDIEGDIMEL 165 (169)
T ss_dssp ----CGGGGHHHHHHH
T ss_pred ----CHHHHHHHHHHH
Confidence 345566666554
No 98
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.13 E-value=2.1e-06 Score=58.43 Aligned_cols=58 Identities=24% Similarity=0.433 Sum_probs=40.7
Q ss_pred CCCceEEe--eCcchHHh-hh--------CCccccCCc-cce---eEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLLA--DFKKEIAT-SY--------GVLIESAGI-PLR---GLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fplls--D~~~~vak-~y--------gv~~~~~G~-~~r---atfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+++||+++ |.++..+. .| +++ |. .+| ++||||++|+|++.+.+.. +.+++.+.|+++
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~----~~~~iP~~~~~~liD~~G~i~~~~~g~~----~~~~l~~~i~~l 181 (187)
T 3dwv_A 110 KAEFPIMAKINVNGENAHPLYEYMKKTKPGIL----ATKAIKWNFTSFLIDRDGVPVERFSPGA----SVKDIEEKLIPL 181 (187)
T ss_dssp CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB----SSSSCCSTTCEEEECTTSCEEEEECTTC----CHHHHHHHHHHH
T ss_pred CCCCceeeccccCCcchhHHHHHHHhhcCCcc----CCCccccceeEEEECCCCCEEEEECCCC----CHHHHHHHHHHH
Confidence 78999997 56665542 23 333 32 367 9999999999999987643 567777777765
Q ss_pred h
Q psy13875 89 Q 89 (105)
Q Consensus 89 ~ 89 (105)
-
T Consensus 182 L 182 (187)
T 3dwv_A 182 L 182 (187)
T ss_dssp C
T ss_pred H
Confidence 3
No 99
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.07 E-value=3.3e-06 Score=56.97 Aligned_cols=77 Identities=10% Similarity=0.248 Sum_probs=45.9
Q ss_pred chHHHHHHHHh-hhcCCCCCCCCCceEEeeC--cchHHh-hhCCccccCCcccee----EEEECCCCCEEEEEeccCCCC
Q psy13875 4 VDEGDEVWLED-VKQGDGGLGDLKYPLLADF--KKEIAT-SYGVLIESAGIPLRG----LFIIDTKGVLRQITVNDLPVG 75 (105)
Q Consensus 4 ~~~sh~~w~~~-~~~~~~~~~~l~fpllsD~--~~~vak-~ygv~~~~~G~~~ra----tfiID~~G~V~~~~~~~~~~~ 75 (105)
.++..++|+++ . +++||+++|. ++..+. .|+......| ..|. +||||++|+|++.+.+..+..
T Consensus 89 ~~~~~~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~p~~~~~~~lid~~G~i~~~~~g~~~~~ 159 (180)
T 3kij_A 89 PSKEVESFARKNY--------GVTFPIFHKIKILGSEGEPAFRFLVDSSK-KEPRWNFWKYLVNPEGQVVKFWRPEEPIE 159 (180)
T ss_dssp CHHHHHHHHHHHH--------CCCSCBBCCCCCSSTTCCHHHHHHHHHHT-CCCSSTTCEEEECTTSCEEEEECTTCCGG
T ss_pred CHHHHHHHHHHhc--------CCCCceeeeeeccCccccHHHHHHHhcCC-CCccccceEEEECCCCCEEEEECCCCCHH
Confidence 34567778866 3 6789988743 333222 2221111011 2466 999999999999998765444
Q ss_pred CCHHHHHHHHHhhh
Q psy13875 76 RSVEEVLRLVKAFQ 89 (105)
Q Consensus 76 ~~~~eil~~l~~l~ 89 (105)
.-.+++.+.|+++.
T Consensus 160 ~l~~~i~~lL~~~~ 173 (180)
T 3kij_A 160 VIRPDIAALVRQVI 173 (180)
T ss_dssp GTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 34455555555544
No 100
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.05 E-value=5.1e-06 Score=58.06 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=25.0
Q ss_pred ceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 52 LRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.|+|||||++|+|++.+.+.. +.+++.+.|+++
T Consensus 173 ~p~tflID~~G~i~~~~~g~~----~~~~l~~~I~~l 205 (208)
T 2f8a_A 173 NFEKFLVGPDGVPLRRYSRRF----QTIDIEPDIEAL 205 (208)
T ss_dssp TTCEEEECTTSCEEEEECTTS----CGGGGHHHHHHH
T ss_pred CceEEEEcCCCcEEEEeCCCC----CHHHHHHHHHHH
Confidence 489999999999999998654 335566666554
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.92 E-value=0.00012 Score=49.30 Aligned_cols=79 Identities=16% Similarity=0.328 Sum_probs=50.2
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCceEEeeCcch-HH----hhhCCcccc--CC-c-cceeEEEECCCCCEEEEEeccCCC
Q psy13875 4 VDEGDEVWLEDVKQGDGGLGDLKYPLLADFKKE-IA----TSYGVLIES--AG-I-PLRGLFIIDTKGVLRQITVNDLPV 74 (105)
Q Consensus 4 ~~~sh~~w~~~~~~~~~~~~~l~fpllsD~~~~-va----k~ygv~~~~--~G-~-~~ratfiID~~G~V~~~~~~~~~~ 74 (105)
.++..++|+++. +.....+.+|++...+ +. ..|+..... .| + -.+++||||++|+|+.++.+..
T Consensus 82 tp~~l~~y~~~~-----~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~-- 154 (170)
T 4hde_A 82 KPENLKAFIQKF-----TEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGIS-- 154 (170)
T ss_dssp CHHHHHHHHTTT-----CSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSS--
T ss_pred cHHHHHHHHHHc-----CCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCC--
Confidence 467788998763 2334456777765432 22 234444221 11 1 2578999999999999987632
Q ss_pred CCCHHHHHHHHHhhh
Q psy13875 75 GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 75 ~~~~~eil~~l~~l~ 89 (105)
..+.+++++.|++|.
T Consensus 155 ~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 155 NTPYEDIIRDMKRLA 169 (170)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 346788888888763
No 102
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.94 E-value=4e-06 Score=53.62 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=31.5
Q ss_pred ceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEec
Q psy13875 27 YPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 27 fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~ 70 (105)
+++..|.++.++++||+. ..|++||||++|+|++.+..
T Consensus 90 ~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGIT------GIPALVIVKKDGTLISMNGR 127 (143)
Confidence 556677778999999986 36999999999999998643
No 103
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.70 E-value=4.1e-05 Score=50.60 Aligned_cols=49 Identities=20% Similarity=0.177 Sum_probs=39.2
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
|.+.++++.||+. | .|+++|+|++|+|++.. |.. ..+.+++++.|+++.
T Consensus 103 ~~~~~l~~~~~v~----~--~Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 103 QKNQELKAQYKVT----G--FPELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHHHHTTCC----S--SSEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHcCCC----C--CCEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHHHH
Confidence 3345899999987 4 69999999999999988 754 347888888887754
No 104
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.45 E-value=0.00025 Score=44.61 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=43.0
Q ss_pred CCCceEE---eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL---ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll---sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+++++|++|+++..+.|.. +.+++.++|+++.
T Consensus 58 ~v~~~~v~~~~d~~~~~~~~~~v~----~--~Pt~~~~~~~G~~~~~~~G~~----~~~~l~~~l~~~~ 116 (126)
T 2l57_A 58 KFNIYYARLEEEKNIDLAYKYDAN----I--VPTTVFLDKEGNKFYVHQGLM----RKNNIETILNSLG 116 (126)
T ss_dssp SCEEEEEETTSSHHHHHHHHTTCC----S--SSEEEEECTTCCEEEEEESCC----CHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCchHHHHHHcCCc----c--eeEEEEECCCCCEEEEecCCC----CHHHHHHHHHHHh
Confidence 4555544 35678999999987 3 699999999999999887643 6788888887654
No 105
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.00031 Score=44.21 Aligned_cols=47 Identities=26% Similarity=0.265 Sum_probs=38.4
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.+..+++.||+. + .|+++++|++|++++.+.|.. +.+++.+.|+++.
T Consensus 74 ~~~~~~~~~~v~----~--~Pt~~~~d~~G~~~~~~~G~~----~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 74 EGVELRKKYGVH----A--YPTLLFINSSGEVVYRLVGAE----DAPELLKKVKLGV 120 (130)
T ss_dssp THHHHHHHTTCC----S--SCEEEEECTTSCEEEEEESCC----CHHHHHHHHHHHH
T ss_pred chHHHHHHcCCC----C--CCEEEEECCCCcEEEEecCCC----CHHHHHHHHHHHH
Confidence 457899999987 3 699999999999999887643 5778888887754
No 106
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.32 E-value=0.00011 Score=47.19 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCceEEe-eCcchHHhhhCCccccCCccceeEEEEC-CCCCEEEEEe
Q psy13875 25 LKYPLLA-DFKKEIATSYGVLIESAGIPLRGLFIID-TKGVLRQITV 69 (105)
Q Consensus 25 l~fplls-D~~~~vak~ygv~~~~~G~~~ratfiID-~~G~V~~~~~ 69 (105)
+.||++. |.+..++++||+. ..|++|||| ++|+|++.+.
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 87 LALPFEDRKGMEFLTTGFDVK------SIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp EECCTTCHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESCH
T ss_pred cccccCchHHHHHHHHHcCCC------CCCEEEEEECCCCcEEeccc
Confidence 3566655 6678999999986 369999999 9999998664
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.24 E-value=0.00011 Score=47.13 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=38.0
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEE--EEEeccCCCCCCHHHHHHHHHhhhhh
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLR--QITVNDLPVGRSVEEVLRLVKAFQFV 91 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~--~~~~~~~~~~~~~~eil~~l~~l~~~ 91 (105)
|.+.++++.||+. | .|+++++|++|+++ +.+.|.. +.+++++.|+.++..
T Consensus 78 ~~~~~l~~~~~v~----~--~Pt~~~~d~~G~~v~~~~~~G~~----~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 78 AQDVALLKHLNVL----G--LPTILFFDGQGQEHPQARVTGFM----DAETFSAHLRDRQPH 129 (134)
T ss_dssp HHHHHHHHHTTCC----S--SSEEEEECTTSCBCGGGCBCSCC----CHHHHHHHHHHC---
T ss_pred chHHHHHHHcCCC----C--CCEEEEECCCCCEeeeeeeeecc----CHHHHHHHHHhcCcc
Confidence 4467899999987 3 69999999999997 5665533 688899999887643
No 108
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.22 E-value=0.0006 Score=43.16 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=40.4
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc-CCC--CCCHHHHHHHHHhhh
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND-LPV--GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~-~~~--~~~~~eil~~l~~l~ 89 (105)
|.+.++++.||+... ...|+++++|++|++++...+. ... ....+++.++|+++.
T Consensus 75 ~~~~~l~~~~~v~~~---~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQ---DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSSHHHHHHTTCGGG---GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccC---CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 677899999999210 1379999999999999998762 221 236778888877654
No 109
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.20 E-value=0.00018 Score=46.32 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=31.5
Q ss_pred CCceEEe-eCcchHHhhhCCccccCCccceeEEEEC-CCCCEEEEEe
Q psy13875 25 LKYPLLA-DFKKEIATSYGVLIESAGIPLRGLFIID-TKGVLRQITV 69 (105)
Q Consensus 25 l~fplls-D~~~~vak~ygv~~~~~G~~~ratfiID-~~G~V~~~~~ 69 (105)
+.||++. |.+..++++||+. ..|++|||| ++|+|++.+.
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~------~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 87 LAVPFAQSEAVQKLSKHFNVE------SIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp EECCGGGHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESCH
T ss_pred eeeccchhhHHHHHHHHhCCC------CCCEEEEEECCCCeEEEecc
Confidence 3566655 6678999999986 369999999 9999998764
No 110
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.05 E-value=0.00029 Score=44.93 Aligned_cols=39 Identities=21% Similarity=0.377 Sum_probs=30.5
Q ss_pred CCceEEe-eCcchHHhhhCCccccCCccceeEEEEC-CCCCEEEEEe
Q psy13875 25 LKYPLLA-DFKKEIATSYGVLIESAGIPLRGLFIID-TKGVLRQITV 69 (105)
Q Consensus 25 l~fplls-D~~~~vak~ygv~~~~~G~~~ratfiID-~~G~V~~~~~ 69 (105)
+.||++. |.+..++++||+. ..|++|||| ++|+|++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~------~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 87 LALPFDQRSTVSELGKTFGVE------SIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp EECCTTCHHHHHHHHHHHTCC------SSSEEEEEETTTCCEEESCH
T ss_pred eEeeccchhHHHHHHHHcCCC------CCCEEEEEECCCCeEEecch
Confidence 3455554 5678899999986 369999999 8999998653
No 111
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.94 E-value=0.0024 Score=40.73 Aligned_cols=55 Identities=11% Similarity=0.273 Sum_probs=40.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+++++|++|+++ .+.+. .+.+++.++|+++.
T Consensus 70 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~~~G~~~-~~~G~----~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 70 QIVIYKVDTEKEQELAGAFGIR----S--IPSILFIPMEGKPE-MAQGA----MPKASFKKAIDEFL 125 (136)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SCEEEEECSSSCCE-EEESC----CCHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCHHHHHHcCCC----C--CCEEEEECCCCcEE-EEeCC----CCHHHHHHHHHHHh
Confidence 3444433 45678899999987 3 69999999999987 45553 36788888887754
No 112
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=96.86 E-value=0.00053 Score=45.54 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=29.4
Q ss_pred CceEEeeCc-chHHhhhCCccccCCccceeEEEECCC-CCEEEEEe
Q psy13875 26 KYPLLADFK-KEIATSYGVLIESAGIPLRGLFIIDTK-GVLRQITV 69 (105)
Q Consensus 26 ~fpllsD~~-~~vak~ygv~~~~~G~~~ratfiID~~-G~V~~~~~ 69 (105)
.||+..+.. ..+++.||+. ..|++||||++ |+|++...
T Consensus 108 ~~~~~~~~~~~~l~~~~~v~------~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 108 SIPFANRNIVEALTKKYSVE------SIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp ECCTTCHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESCH
T ss_pred ccccCchhHHHHHHHHcCCC------CCCEEEEEeCCCCEEEeccc
Confidence 455544433 7999999987 36999999998 99998654
No 113
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=96.59 E-value=0.005 Score=39.08 Aligned_cols=55 Identities=15% Similarity=0.265 Sum_probs=40.8
Q ss_pred CCCceE-EeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPL-LADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpl-lsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-. -.|.+..+++.||+. + .|+.+++|++|++. .+.|. .+.+++.+.|+.+-
T Consensus 83 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~~~~g~~~-~~~G~----~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 83 KIYIYKVNVDKEPELARDFGIQ----S--IPTIWFVPMKGEPQ-VNMGA----LSKEQLKGYIDKVL 138 (141)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEECSSSCCE-EEESC----CCHHHHHHHHHHTT
T ss_pred ceEEEEEECCCCHHHHHHcCCC----C--cCEEEEEeCCCCEE-EEeCC----CCHHHHHHHHHHHH
Confidence 344433 356678999999987 3 69999999999987 55553 36788888887653
No 114
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=96.56 E-value=0.0047 Score=37.89 Aligned_cols=55 Identities=25% Similarity=0.372 Sum_probs=41.9
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.+++++||+. + .|+++++ ++|+++..+.|.. +.+++.++++++.
T Consensus 49 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~~ 104 (112)
T 2voc_A 49 KLKIVKIDVDENQETAGKYGVM----S--IPTLLVL-KDGEVVETSVGFK----PKEALQELVNKHL 104 (112)
T ss_dssp TCEEEEEETTTCCSHHHHTTCC----S--BSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHTTS
T ss_pred CcEEEEEECCCCHHHHHHcCCC----c--ccEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHHH
Confidence 3455444 46678999999987 3 6999999 9999999888643 6788888887644
No 115
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.38 E-value=0.0078 Score=35.95 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=40.4
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 106 (107)
T 2i4a_A 52 KVTVAKVNIDDNPETPNAYQVR----S--IPTLMLV-RDGKVIDKKVGAL----PKSQLKAWVESA 106 (107)
T ss_dssp SEEEEEEETTTCCHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHT
T ss_pred cEEEEEEECCCCHHHHHhcCCC----c--cCEEEEE-eCCEEEEEecCCC----CHHHHHHHHHhc
Confidence 3454444 35678999999987 3 6999999 9999998887633 677888887664
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.34 E-value=0.0012 Score=43.62 Aligned_cols=42 Identities=10% Similarity=0.116 Sum_probs=32.9
Q ss_pred HhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 38 ATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 38 ak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.||+. | .|+++|||++|+|+..+.|.. .+.+++++.|++.
T Consensus 123 ~~~~~v~----~--~Pt~~lid~~G~~~~~~~G~~---~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGAN----A--QPFYVLIDNEGNPLNKSYAYD---EDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCC----C--SSEEEEECTTSCBSSCCBCSC---CCHHHHHHHHHHH
T ss_pred HHHcCCC----C--cceEEEECCCCCEEeeccCCC---CCHHHHHHHHHHH
Confidence 6888887 4 699999999999998887644 2377787777664
No 117
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.29 E-value=0.0089 Score=35.90 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=39.9
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 106 (108)
T 2trx_A 52 KLTVAKLNIDQNPGTAPKYGIR----G--IPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 106 (108)
T ss_dssp TEEEEEEETTTCTTHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHcCCc----c--cCEEEEE-eCCEEEEEEecCC----CHHHHHHHHHHh
Confidence 3444443 45678899999987 3 6999999 8999998887643 577787777654
No 118
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.28 E-value=0.0066 Score=36.31 Aligned_cols=53 Identities=13% Similarity=0.226 Sum_probs=39.4
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+++++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 50 v~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 103 (105)
T 1nsw_A 50 VTVAKLNVDENPETTSQFGIM----S--IPTLILF-KGGRPVKQLIGYQ----PKEQLEAQLADV 103 (105)
T ss_dssp CEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHTTTT
T ss_pred cEEEEEECcCCHHHHHHcCCc----c--ccEEEEE-eCCeEEEEEecCC----CHHHHHHHHHHH
Confidence 454444 45678899999987 3 6999999 8999998887643 567777777654
No 119
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.26 E-value=0.0057 Score=40.75 Aligned_cols=54 Identities=13% Similarity=0.278 Sum_probs=41.5
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|--+ .|.+.+++.+|||. .+|+.++. ++|+++....|.. +.+++.+.|+++.
T Consensus 70 v~~~KVdvDe~~~lA~~ygV~------sIPTlilF-k~G~~v~~~~G~~----~k~~l~~~i~~~l 124 (140)
T 2qgv_A 70 WQVAIADLEQSEAIGDRFGAF------RFPATLVF-TGGNYRGVLNGIH----PWAELINLMRGLV 124 (140)
T ss_dssp CEEEECCHHHHHHHHHHHTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHcCCc------cCCEEEEE-ECCEEEEEEecCC----CHHHHHHHHHHHh
Confidence 555544 56788999999997 47988888 8999999998753 5677777777643
No 120
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=96.24 E-value=0.0042 Score=40.78 Aligned_cols=48 Identities=19% Similarity=0.278 Sum_probs=34.6
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.|.+.+++++||+. ..|+++++ ++|+++..+.|.. +.+++.+.|+++.
T Consensus 77 ~d~~~~la~~~~V~------~iPT~~~f-k~G~~v~~~~G~~----~~~~l~~~i~~~l 124 (142)
T 2es7_A 77 LEQSEAIGDRFNVR------RFPATLVF-TDGKLRGALSGIH----PWAELLTLMRSIV 124 (142)
T ss_dssp HHHHHHHHHTTTCC------SSSEEEEE-SCC----CEESCC----CHHHHHHHHHHHH
T ss_pred CCCCHHHHHhcCCC------cCCeEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHHh
Confidence 46678999999997 36999999 9999998887743 5777888777654
No 121
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=96.23 E-value=0.0099 Score=35.93 Aligned_cols=55 Identities=18% Similarity=0.153 Sum_probs=41.3
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. ..|+.+++ ++|+++..+.|. .+.+++.++|+++.
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~l 112 (115)
T 1thx_A 57 RLKVVKLEIDPNPTTVKKYKVE------GVPALRLV-KGEQILDSTEGV----ISKDKLLSFLDTHL 112 (115)
T ss_dssp TCEEEEEESTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred cEEEEEEEcCCCHHHHHHcCCC------ceeEEEEE-cCCEEEEEecCC----CCHHHHHHHHHHHh
Confidence 3555444 45678899999987 36999999 999999888763 36778888887653
No 122
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.21 E-value=0.0096 Score=37.53 Aligned_cols=47 Identities=23% Similarity=0.384 Sum_probs=37.9
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.|.+.++++.||+. | .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 75 ~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 121 (123)
T 1oaz_A 75 IDQNPGTAPKYGIR----G--IPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 121 (123)
T ss_dssp TTSCTTTGGGGTCC----B--SSEEEEE-ESSSEEEEEESCC----CHHHHHHHHTTT
T ss_pred CCCCHHHHHHcCCC----c--cCEEEEE-ECCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 46678999999987 3 6999999 9999998887643 678888888764
No 123
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.18 E-value=0.012 Score=35.63 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=37.8
Q ss_pred CCCceEE-ee-CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-AD-FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD-~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|--+ .| .+..++++||+. + .|+ |+++++|+++..+.|. +.+++.+.|+++
T Consensus 55 ~v~~~~vd~~~~~~~~~~~~~v~----~--~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (111)
T 2pu9_C 55 DVIFLKLDCNQENKTLAKELGIR----V--VPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 109 (111)
T ss_dssp TSEEEEEECSSTTHHHHHHHCCS----B--SSE-EEEESSSSEEEEEESS-----CHHHHHHHHHHH
T ss_pred CeEEEEEecCcchHHHHHHcCCC----e--eeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 3444433 33 568999999987 3 576 8888999999888753 367777777664
No 124
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.15 E-value=0.012 Score=35.15 Aligned_cols=54 Identities=22% Similarity=0.332 Sum_probs=41.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. ..|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 53 ~~~~~~v~~~~~~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~ 107 (109)
T 3tco_A 53 KAVFGRLNVDENQKIADKYSVL------NIPTTLIF-VNGQLVDSLVGAV----DEDTLESTVNKY 107 (109)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CceEEEEccccCHHHHHhcCcc------cCCEEEEE-cCCcEEEeeeccC----CHHHHHHHHHHH
Confidence 3455444 55678999999987 36999999 9999999887643 677888887764
No 125
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.14 E-value=0.011 Score=36.61 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=39.8
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++
T Consensus 63 ~v~~~~vd~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 117 (119)
T 1w4v_A 63 KVVMAKVDIDDHTDLAIEYEVS----A--VPTVLAM-KNGDVVDKFVGIK----DEDQLEAFLKKL 117 (119)
T ss_dssp SSEEEEEETTTTHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHcCCC----c--ccEEEEE-eCCcEEEEEcCCC----CHHHHHHHHHHH
Confidence 3454444 45677899999987 3 6999888 8999998887643 577787777654
No 126
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.14 E-value=0.017 Score=34.53 Aligned_cols=53 Identities=17% Similarity=0.372 Sum_probs=38.0
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 52 ~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 105 (107)
T 1dby_A 52 LKCVKLNTDESPNVASEYGIR----S--IPTIMVF-KGGKKCETIIGAV----PKATIVQTVEKY 105 (107)
T ss_dssp CEEEEEETTTCHHHHHHHTCC----S--SCEEEEE-SSSSEEEEEESCC----CHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHCCCC----c--CCEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 444433 45678899999987 3 5886666 8999998887643 567777777654
No 127
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.12 E-value=0.013 Score=34.90 Aligned_cols=55 Identities=15% Similarity=0.191 Sum_probs=41.3
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++.
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~l 105 (109)
T 2yzu_A 50 KLLVAKLDVDENPKTAMRYRVM----S--IPTVILF-KDGQPVEVLVGAQ----PKRNYQAKIEKHL 105 (109)
T ss_dssp TBEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHTTC
T ss_pred ceEEEEEECCCCHhHHHhCCCC----c--CCEEEEE-eCCcEeeeEeCCC----CHHHHHHHHHHHh
Confidence 3454444 46678999999987 3 6999999 8999998887643 6788888887654
No 128
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.11 E-value=0.013 Score=34.43 Aligned_cols=53 Identities=23% Similarity=0.369 Sum_probs=39.8
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++
T Consensus 48 ~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~~ 101 (104)
T 2e0q_A 48 VGFGKLNSDENPDIAARYGVM----S--LPTVIFF-KDGEPVDEIIGAV----PREEIEIRIKNL 101 (104)
T ss_dssp SEEEEEETTTCHHHHHHTTCC----S--SCEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred ceEEEEECCCCHHHHHhCCcc----c--cCEEEEE-ECCeEhhhccCCC----CHHHHHHHHHHH
Confidence 455444 46678899999987 3 6999988 8999998887643 577787777664
No 129
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.00 E-value=0.011 Score=37.42 Aligned_cols=54 Identities=24% Similarity=0.369 Sum_probs=40.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+++++ ++|+++..+.|.. +.+++.++|+++
T Consensus 72 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 126 (128)
T 2o8v_B 72 KLTVAKLNIDQNPGTAPKYGIR----G--IPTLLLF-KNGEVAATKVGAL----SKGQLKEFLDAN 126 (128)
T ss_dssp TEEEEEEETTTCCTTSGGGTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHHcCCC----c--cCEEEEE-eCCEEEEEEcCCC----CHHHHHHHHHHh
Confidence 3444433 45678899999987 3 6999999 8999998887643 577888877664
No 130
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.91 E-value=0.02 Score=38.28 Aligned_cols=58 Identities=21% Similarity=0.122 Sum_probs=40.5
Q ss_pred chHHhhhCCccccCCccceeEEEECCC-CCEEEEEeccCCCCCCHHHHHHHHHhhhhh--hhcCCcccCCCC
Q psy13875 35 KEIATSYGVLIESAGIPLRGLFIIDTK-GVLRQITVNDLPVGRSVEEVLRLVKAFQFV--DKHGEGSKRVPS 103 (105)
Q Consensus 35 ~~vak~ygv~~~~~G~~~ratfiID~~-G~V~~~~~~~~~~~~~~~eil~~l~~l~~~--~~~~~~~~~~~~ 103 (105)
..+++.|++. | .|+.++||++ |+.+..+. +.+.+++++.|++.... ...|+++++.|+
T Consensus 91 ~~l~~~y~v~----~--~P~~~fld~~~G~~l~~~~-----g~~~~~fl~~L~~~l~~~~~~~~~~~~~~~~ 151 (153)
T 2dlx_A 91 QRYIQFYKLG----D--FPYVSILDPRTGQKLVEWH-----QLDVSSFLDQVTGFLGEHGQLDGLSSSSGPS 151 (153)
T ss_dssp HHHHHHHTCC----S--SSEEEEECTTTCCCCEEES-----SCCHHHHHHHHHHHHHHTCSCSSCCCCCSCC
T ss_pred HHHHHHcCCC----C--CCEEEEEeCCCCcEeeecC-----CCCHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 4688899986 4 6999999999 86666542 24789999888775422 223566666665
No 131
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=95.91 E-value=0.021 Score=33.93 Aligned_cols=53 Identities=17% Similarity=0.220 Sum_probs=39.3
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.++++ +|+++..+.|. .+.+++.+.|+++
T Consensus 52 ~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~~ 105 (106)
T 3die_A 52 ADILKLDVDENPSTAAKYEVM----S--IPTLIVFK-DGQPVDKVVGF----QPKENLAEVLDKH 105 (106)
T ss_dssp CEEEEEETTTCHHHHHHTTCC----S--BSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred cEEEEEECCcCHHHHHhCCCc----c--cCEEEEEe-CCeEEEEEeCC----CCHHHHHHHHHHh
Confidence 455444 46678999999987 3 68888884 99999888763 3678888887653
No 132
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=95.88 E-value=0.02 Score=34.94 Aligned_cols=55 Identities=13% Similarity=0.237 Sum_probs=41.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+++++ ++|+++..+.|.. +.+++.+.|++..
T Consensus 50 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~v~~~~G~~----~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 50 QVAISSVDSEARPELMKELGFE----R--VPTLVFI-RDGKVAKVFSGIM----NPRELQALYASIH 105 (110)
T ss_dssp TSCEEEEEGGGCHHHHHHTTCC----S--SCEEEEE-ESSSEEEEEESCC----CHHHHHHHHHTC-
T ss_pred CcEEEEEcCcCCHHHHHHcCCc----c--cCEEEEE-ECCEEEEEEcCCC----CHHHHHHHHHHHh
Confidence 4555443 45678899999987 3 6999999 8999999888643 6778888877654
No 133
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=95.70 E-value=0.023 Score=34.19 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=32.5
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 49 ~~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~g~~----~~~~l~~~l~~~ 103 (105)
T 4euy_A 49 YVEKIEILLQDMQEIAGRYAVF----T--GPTVLLF-YNGKEILRESRFI----SLENLERTIQLF 103 (105)
T ss_dssp TEEEEEEEECCC---------C----C--CCEEEEE-ETTEEEEEEESSC----CHHHHHHHHHTT
T ss_pred CceEEEEECCCCHHHHHhcCCC----C--CCEEEEE-eCCeEEEEEeCCc----CHHHHHHHHHHh
Confidence 4454433 56778999999987 3 6999999 5999998887643 688888888764
No 134
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=95.70 E-value=0.011 Score=37.62 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=34.4
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhh
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~ 90 (105)
|.+.+++++||+. + .| ||++.++|+++..+.|.. ..+.+.+.++++..
T Consensus 79 d~~~~l~~~~~v~----~--~P-t~~~~~~G~~v~~~~G~~----~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 79 SAARLEMNKAGVE----G--TP-TLVFYKEGRIVDKLVGAT----PWSLKVEKAREIYG 126 (135)
T ss_dssp HHHHHHHHHHTCC----S--SS-EEEEEETTEEEEEEESCC----CHHHHHHHHHHHC-
T ss_pred hhhHHHHHHcCCc----e--eC-eEEEEcCCEEEEEEeCCC----CHHHHHHHHHHHhC
Confidence 5678999999987 4 58 555556999999988743 45666666666543
No 135
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=95.59 E-value=0.02 Score=35.89 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=36.7
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
.|.+.+++++||+. | .|+++++ ++|+++..+.|. .+.+++.+.|++
T Consensus 82 ~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 127 (128)
T 3ul3_B 82 LDKNESLARKFSVK----S--LPTIILL-KNKTMLARKDHF----VSSNDLIALIKK 127 (128)
T ss_dssp GGGCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEESSC----CCHHHHHHHHTT
T ss_pred CCCCHHHHHHcCCC----C--cCEEEEE-ECCEEEEEecCC----CCHHHHHHHHHh
Confidence 56678999999987 3 6999999 799999888763 367888877754
No 136
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=95.55 E-value=0.026 Score=34.88 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=37.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
++.|--+ .|.+.++++.||+. | .|+.+++ ++|+++..+.| .+.+++.+.|++
T Consensus 51 ~~~~~~vd~d~~~~l~~~~~V~----~--~PT~~~~-~~G~~v~~~~G-----~~~~~l~~~i~k 103 (105)
T 3zzx_A 51 DVVFLKVDVDECEDIAQDNQIA----C--MPTFLFM-KNGQKLDSLSG-----ANYDKLLELVEK 103 (105)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC----B--SSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHH
T ss_pred CeEEEEEecccCHHHHHHcCCC----e--ecEEEEE-ECCEEEEEEeC-----cCHHHHHHHHHh
Confidence 3444333 56678999999997 4 5765554 89999998876 367888887765
No 137
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=95.48 E-value=0.025 Score=34.17 Aligned_cols=54 Identities=20% Similarity=0.319 Sum_probs=37.8
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 55 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 109 (112)
T 1t00_A 55 KIEIVKLNIDENPGTAAKYGVM----S--IPTLNVY-QGGEVAKTIVGAK----PKAAIVRDLEDF 109 (112)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHTHHH
T ss_pred CeEEEEEEcCCCHHHHHhCCCC----c--ccEEEEE-eCCEEEEEEeCCC----CHHHHHHHHHHH
Confidence 3444433 45678999999987 4 5765555 8999998887643 567777777654
No 138
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.47 E-value=0.014 Score=38.75 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=42.2
Q ss_pred CCceEE-eeCcch-HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC------CCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKE-IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV------GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~-vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~------~~~~~eil~~l~~l~ 89 (105)
+.|-.+ .|.+.. +++.|++. +...|+++++|++|+++..+.+.... ..+.+++++.|+++.
T Consensus 79 ~~~~~v~~d~~~~~~~~~~~~~----~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 79 HNFVMVNLEDEEEPKDEDFSPD----GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TTSEEEEEEGGGSCSCGGGCTT----CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CeEEEEEecCCchHHHHHhccc----CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 444444 455544 77888764 33579999999999998877764221 257888988887754
No 139
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.44 E-value=0.0025 Score=40.00 Aligned_cols=47 Identities=17% Similarity=0.179 Sum_probs=33.6
Q ss_pred CcchHHhhhCCccccCCccceeEEEECC-CCCE--EEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDT-KGVL--RQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~-~G~V--~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.+..+++.||+. + .|+++++|+ +|++ +..+.|.. +.+++.+.|+++.
T Consensus 66 ~~~~~~~~~~v~----~--~Pt~~~~d~~~G~~~~~~~~~G~~----~~~~l~~~l~~~~ 115 (130)
T 2lst_A 66 EGQELARRYRVP----G--TPTFVFLVPKAGAWEEVGRLFGSR----PRAEFLKELRQVC 115 (130)
Confidence 446788888886 3 799999996 5998 77776543 4556666776643
No 140
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.40 E-value=0.026 Score=34.82 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=37.5
Q ss_pred CCCceEE-ee-CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-AD-FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD-~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|--+ .| .+.+++++||+. + .|+ |+++++|+++..+.|. ..+++.+.|+++
T Consensus 68 ~~~~~~vd~~~~~~~~~~~~~v~----~--~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~i~~~ 122 (124)
T 1faa_A 68 DVIFLKLDCNQENKTLAKELGIR----V--VPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 122 (124)
T ss_dssp TSEEEEEECSSTTHHHHHHHCCS----S--SSE-EEEEETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CCEEEEEecCcchHHHHHHcCCC----e--eeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 3454443 23 467899999987 4 576 7777999999888753 367777777764
No 141
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.38 E-value=0.035 Score=34.41 Aligned_cols=54 Identities=6% Similarity=0.175 Sum_probs=38.8
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. + .|+++++ ++|++ ..+.| ..+.+++.++|+++.
T Consensus 55 ~v~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~-~~~~G----~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 55 EVNIAKVDVTEQPGLSGRFIIN----A--LPTIYHC-KDGEF-RRYQG----PRTKKDFINFISDKE 109 (126)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEE-EECCS----CCCHHHHHHHHHTCG
T ss_pred CeEEEEEECcCCHHHHHHcCCc----c--cCEEEEE-eCCeE-EEeec----CCCHHHHHHHHHHHh
Confidence 3454444 45678899999987 3 6999999 89986 44433 347888999988764
No 142
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=95.36 E-value=0.048 Score=33.60 Aligned_cols=53 Identities=11% Similarity=0.126 Sum_probs=38.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|--+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. +.+++.+.|+++
T Consensus 62 ~v~~~~vd~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 115 (116)
T 3qfa_C 62 NVIFLEVDVDDCQDVASECEVK----S--MPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 115 (116)
T ss_dssp TSEEEEEETTTTHHHHHHTTCC----S--SSEEEEE-SSSSEEEEEESC-----CHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHcCCc----c--ccEEEEE-eCCeEEEEEcCC-----CHHHHHHHHHHh
Confidence 3444433 56678999999987 3 6887777 899999888753 577777777653
No 143
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=95.35 E-value=0.044 Score=32.37 Aligned_cols=53 Identities=13% Similarity=0.261 Sum_probs=37.1
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 51 ~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~G~~----~~~~l~~~l~~~ 104 (105)
T 1fb6_A 51 IAVYKLNTDEAPGIATQYNIR----S--IPTVLFF-KNGERKESIIGAV----PKSTLTDSIEKY 104 (105)
T ss_dssp CEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEEECC----CHHHHHHHHHHH
T ss_pred eEEEEEcCcchHHHHHhCCCC----c--ccEEEEE-eCCeEEEEEecCC----CHHHHHHHHHhh
Confidence 444333 45667899999987 3 5876555 7999998887743 567777777653
No 144
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.35 E-value=0.035 Score=34.44 Aligned_cols=54 Identities=17% Similarity=0.258 Sum_probs=39.7
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|-.+ .|.+..+++.||+. + .|+++++++ |++...+.+. .+.+++.++|+++.
T Consensus 62 ~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~~-g~~~~~~~G~----~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 62 VKLAAVDATVNQVLASRYGIR----G--FPTIKIFQK-GESPVDYDGG----RTRSDIVSRALDLF 116 (133)
T ss_dssp EEEEEEETTTCCHHHHHHTCC----S--SSEEEEEET-TEEEEEECSC----CSHHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHhCCCC----e--eCeEEEEeC-CCceEEecCC----CCHHHHHHHHHHHh
Confidence 444333 45568899999987 3 699999987 8877777653 36888888887754
No 145
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=95.33 E-value=0.034 Score=36.40 Aligned_cols=55 Identities=9% Similarity=0.152 Sum_probs=41.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|--+ .|.+.+++++||+. ..|+.+++ ++|+++..+.|.. +.+++.++|+++.
T Consensus 96 ~v~~~~vd~~~~~~l~~~~~i~------~~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l 151 (155)
T 2ppt_A 96 QVRLAKIDTQAHPAVAGRHRIQ------GIPAFILF-HKGRELARAAGAR----PASELVGFVRGKL 151 (155)
T ss_dssp TCEEEEEETTTSTHHHHHTTCC------SSSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred CEEEEEEeCCccHHHHHHcCCC------cCCEEEEE-eCCeEEEEecCCC----CHHHHHHHHHHHh
Confidence 4555444 45678999999987 36999888 7999998887643 6778888887643
No 146
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=95.32 E-value=0.04 Score=32.96 Aligned_cols=54 Identities=9% Similarity=0.223 Sum_probs=40.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. ..|+.+++ ++|+++..+.|. .+.+++.+.|+++
T Consensus 54 ~v~~~~vd~~~~~~l~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 54 SFGFYYVDVEEEKTLFQRFSLK------GVPQILYF-KDGEYKGKMAGD----VEDDEVEQMIADV 108 (111)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------SSCEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHH
T ss_pred ceEEEEEECCcChhHHHhcCCC------cCCEEEEE-ECCEEEEEEecc----CCHHHHHHHHHHH
Confidence 3555444 46678899999987 36999999 799998888764 3677888887764
No 147
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=95.26 E-value=0.032 Score=33.59 Aligned_cols=53 Identities=19% Similarity=0.251 Sum_probs=37.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+ |++.++|+++..+.|. +.+++.+.|+++
T Consensus 56 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (112)
T 1ep7_A 56 KVIFLKVDVDAVAAVAEAAGIT----A--MPT-FHVYKDGVKADDLVGA-----SQDKLKALVAKH 109 (112)
T ss_dssp TSEEEEEETTTTHHHHHHHTCC----B--SSE-EEEEETTEEEEEEESC-----CHHHHHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHcCCC----c--ccE-EEEEECCeEEEEEcCC-----CHHHHHHHHHHH
Confidence 3444443 45678999999987 3 576 5555899999888753 567777777664
No 148
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=95.23 E-value=0.052 Score=32.99 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=39.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. + .|+.++++ +|+++..+.|. +.+++.+.|+++
T Consensus 55 ~~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~ 108 (109)
T 3f3q_A 55 QADFYKLDVDELGDVAQKNEVS----A--MPTLLLFK-NGKEVAKVVGA-----NPAAIKQAIAAN 108 (109)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHcCCC----c--cCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHhh
Confidence 4555443 56678999999987 4 69888887 99999888763 457777777653
No 149
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.12 E-value=0.046 Score=34.30 Aligned_cols=53 Identities=21% Similarity=0.271 Sum_probs=37.0
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|-.+ .|.+..+++.||+. + .|+.+++ ++|+ +..+.+ ..+.+++.++|+++.
T Consensus 70 v~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~-~~~~~g----~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 70 IAVAKIDATSASMLASKFDVS----G--YPTIKIL-KKGQ-AVDYDG----SRTQEEIVAKVREVS 123 (140)
T ss_dssp CEEEEECTTTCHHHHHHTTCC----S--SSEEEEE-ETTE-EEECCS----CCCHHHHHHHHHHHH
T ss_pred eEEEEEeCcccHHHHHHCCCC----c--cCeEEEE-ECCc-EEEcCC----CCCHHHHHHHHHHhc
Confidence 444333 34567899999987 3 6999999 7898 444443 347888888887764
No 150
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=95.11 E-value=0.045 Score=34.66 Aligned_cols=55 Identities=18% Similarity=0.229 Sum_probs=40.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++.
T Consensus 82 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~i~~~l 137 (140)
T 1v98_A 82 RLKVVKVNVDEHPGLAARYGVR----S--VPTLVLF-RRGAPVATWVGAS----PRRVLEERLRPYL 137 (140)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred ceEEEEEECCCCHHHHHHCCCC----c--cCEEEEE-eCCcEEEEEeCCC----CHHHHHHHHHHHH
Confidence 3455444 45577899999987 3 6888888 7999998887643 5777887777643
No 151
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=95.05 E-value=0.047 Score=35.35 Aligned_cols=54 Identities=11% Similarity=0.161 Sum_probs=40.5
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. + .|++++++ +|+++..+.|. +.+++.+.|+++.
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~l 117 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEIS----S--VPTFLFFK-NSQKIDRLDGA-----HAPELTKKVQRHA 117 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC----S--SSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHHS
T ss_pred CeEEEEEECCCCHHHHHHcCCC----C--CCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHHHh
Confidence 4555544 45677899999987 3 69999999 99998887752 4677888887754
No 152
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.02 E-value=0.026 Score=35.05 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=38.9
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+..+++.|++. ..|++++++++|++...+.+ ..+.++++++|.+.
T Consensus 68 ~~~~~vd~~~~~~l~~~~~v~------~~Pt~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 68 VKVGAVNADKHQSLGGQYGVQ------GFPTIKIFGANKNKPEDYQG----GRTGEAIVDAALSA 122 (130)
T ss_dssp SEEEEEETTTCHHHHHHHTCC------SSSEEEEESSCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHcCCC------ccCEEEEEeCCCCeEEEeec----CCCHHHHHHHHHHH
Confidence 444433 45678899999987 36999999999985555554 34678888877654
No 153
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=94.96 E-value=0.044 Score=35.00 Aligned_cols=55 Identities=4% Similarity=0.150 Sum_probs=40.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|. .+.+++.++|+++.
T Consensus 87 ~~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 87 KVRFVKVNTEAEPALSTRFRIR----S--IPTIMLY-RNGKMIDMLNGA----VPKAPFDNWLDEQL 142 (148)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEESSC----CCHHHHHHHHHHHH
T ss_pred ceEEEEEECcCCHHHHHHCCCC----c--cCEEEEE-ECCeEEEEEeCC----CCHHHHHHHHHHHh
Confidence 4555444 45678999999987 4 6887777 699999887764 36788888887654
No 154
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=94.93 E-value=0.047 Score=34.65 Aligned_cols=48 Identities=6% Similarity=0.137 Sum_probs=35.2
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEE-CCCCC--EEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFII-DTKGV--LRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiI-D~~G~--V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.|.+..+++.||+. + .|+++++ |++|+ ++..+.|. +.+++.+.|+++.
T Consensus 78 ~~~~~~l~~~~~v~----~--~Pt~~~~~~~~g~g~~~~~~~G~-----~~~~l~~~l~~~l 128 (133)
T 3cxg_A 78 VDIHPKLNDQHNIK----A--LPTFEFYFNLNNEWVLVHTVEGA-----NQNDIEKAFQKYC 128 (133)
T ss_dssp TTTCHHHHHHTTCC----S--SSEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHHS
T ss_pred ccchHHHHHhcCCC----C--CCEEEEEEecCCCeEEEEEEcCC-----CHHHHHHHHHHHH
Confidence 35567899999987 3 6999998 44555 88887753 4778888887653
No 155
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.93 E-value=0.044 Score=36.25 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=42.4
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|--+ .|.+.+++.+||+. .+|+.++. ++|+++....|.. +.+++.+.|+++.
T Consensus 67 ~v~~~KVdvDe~~~la~~ygV~------siPTlilF-kdG~~v~~~vG~~----~k~~l~~~l~~~l 122 (137)
T 2qsi_A 67 RLVAAEVAAEAERGLMARFGVA------VCPSLAVV-QPERTLGVIAKIQ----DWSSYLAQIGAML 122 (137)
T ss_dssp TEEEEEECGGGHHHHHHHHTCC------SSSEEEEE-ECCEEEEEEESCC----CHHHHHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHcCCc------cCCEEEEE-ECCEEEEEEeCCC----CHHHHHHHHHHHh
Confidence 4555544 56778999999998 47999999 8999999998754 5667777776544
No 156
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=94.91 E-value=0.049 Score=32.21 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+ |++.++|+++..+.| . +.+++.+.|+++
T Consensus 52 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt-~~~~~~G~~~~~~~g-~----~~~~l~~~i~~~ 105 (106)
T 1xwb_A 52 NVVVLKVDVDECEDIAMEYNIS----S--MPT-FVFLKNGVKVEEFAG-A----NAKRLEDVIKAN 105 (106)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC----S--SSE-EEEEETTEEEEEEES-C----CHHHHHHHHHHT
T ss_pred CeEEEEEeccchHHHHHHcCCC----c--ccE-EEEEcCCcEEEEEcC-C----CHHHHHHHHHHh
Confidence 3444333 45677899999987 4 577 455589999888875 2 467777777653
No 157
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=94.83 E-value=0.058 Score=33.72 Aligned_cols=53 Identities=11% Similarity=0.273 Sum_probs=36.9
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|--+ .|.+.+++++||+. + .|+.+++ ++|+++..+.+ . +.+++.+.|+++
T Consensus 69 ~v~~~~vd~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G-~----~~~~l~~~l~~~ 122 (124)
T 1xfl_A 69 NVLFLKVDTDELKSVASDWAIQ----A--MPTFMFL-KEGKILDKVVG-A----KKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEEETTTSHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEES-C----CHHHHHHHHHHH
T ss_pred CcEEEEEECccCHHHHHHcCCC----c--cCEEEEE-ECCEEEEEEeC-C----CHHHHHHHHHHh
Confidence 3444433 45578999999987 4 5775555 89999988875 2 567777777654
No 158
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=94.81 E-value=0.051 Score=34.22 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=39.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. +.+++.+.|+++.
T Consensus 77 ~v~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~~ 131 (139)
T 3d22_A 77 SLMFLVIDVDELSDFSASWEIK----A--TPTFFFL-RDGQQVDKLVGA-----NKPELHKKITAIL 131 (139)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC----E--ESEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHHH
T ss_pred CCEEEEEeCcccHHHHHHcCCC----c--ccEEEEE-cCCeEEEEEeCC-----CHHHHHHHHHHHh
Confidence 4555444 56678999999987 3 6877766 999999988763 4667777776654
No 159
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=94.78 E-value=0.06 Score=32.08 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=37.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. .+.+++.++|++
T Consensus 56 ~~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 109 (111)
T 3uvt_A 56 GVKIAEVDCTAERNICSKYSVR----G--YPTLLLF-RGGKKVSEHSGG----RDLDSLHRFVLS 109 (111)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEECSC----CSHHHHHHHHHH
T ss_pred ceEEEEEeccccHhHHHhcCCC----c--ccEEEEE-eCCcEEEeccCC----cCHHHHHHHHHh
Confidence 3444333 45567899999987 3 6877666 899988877653 378888888765
No 160
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=94.51 E-value=0.078 Score=32.62 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=35.6
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
+.|-.+ .|.+.+++++||+. + .|+.+++ ++|+++..+.|. ..+++.+.|++
T Consensus 62 v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~ 113 (114)
T 2oe3_A 62 VRFVKCDVDESPDIAKECEVT----A--MPTFVLG-KDGQLIGKIIGA-----NPTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTTCHHHHHHTTCC----S--BSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHT
T ss_pred CEEEEEECCCCHHHHHHCCCC----c--ccEEEEE-eCCeEEEEEeCC-----CHHHHHHHHHh
Confidence 454443 45567899999987 3 5876555 899999888763 26677777654
No 161
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=94.47 E-value=0.086 Score=31.12 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=38.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
++.|-.+ .|.+..+++.||+. ..|+.+++ ++|+++..+.|. +.+++.+.|++
T Consensus 51 ~~~~~~vd~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~ 103 (105)
T 3m9j_A 51 NVIFLEVDVDDCQDVASESEVK------SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINE 103 (105)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC------BSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHH
T ss_pred CeEEEEEEhhhhHHHHHHcCCC------cCcEEEEE-ECCeEEEEEeCC-----CHHHHHHHHHH
Confidence 4454433 45678999999987 36999999 789988887753 56777777765
No 162
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=94.41 E-value=0.073 Score=32.24 Aligned_cols=53 Identities=9% Similarity=0.203 Sum_probs=37.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. + .|+ |++.++|+++..+.|. +.+++.+.|+++
T Consensus 57 ~v~~~~vd~~~~~~~~~~~~v~----~--~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 110 (112)
T 1syr_A 57 KMVFIKVDVDEVSEVTEKENIT----S--MPT-FKVYKNGSSVDTLLGA-----NDSALKQLIEKY 110 (112)
T ss_dssp TSEEEEEETTTTHHHHHHTTCC----S--SSE-EEEEETTEEEEEEESC-----CHHHHHHHHHTT
T ss_pred CCEEEEEECCCCHHHHHHcCCC----c--ccE-EEEEECCcEEEEEeCC-----CHHHHHHHHHHh
Confidence 4555444 44567899999987 4 576 5555799998887652 577888877764
No 163
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=94.40 E-value=0.043 Score=35.71 Aligned_cols=53 Identities=6% Similarity=0.046 Sum_probs=36.7
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC------CCCHHHHHHHHHhhhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV------GRSVEEVLRLVKAFQF 90 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~------~~~~~eil~~l~~l~~ 90 (105)
.|.+.++++.|++. ..|+++ ++++|+++.+..+.... ..+.+++.+.|+.+-.
T Consensus 63 ~d~~~~l~~~~~v~------~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 63 VDQTAVYTQYFDIS------YIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp TTTCCHHHHHTTCC------SSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHcCCC------ccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 46788999999987 368888 67899999443332110 2357888888877643
No 164
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=94.40 E-value=0.084 Score=33.54 Aligned_cols=54 Identities=15% Similarity=0.105 Sum_probs=38.9
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|.. +.+++.++|+++.
T Consensus 57 v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~l 111 (140)
T 3hz4_A 57 AVFGRINIATNPWTAEKYGVQ----G--TPTFKFF-CHGRPVWEQVGQI----YPSILKNAVRDML 111 (140)
T ss_dssp SEEEEEETTTCHHHHHHHTCC----E--ESEEEEE-ETTEEEEEEESSC----CHHHHHHHHHHHH
T ss_pred eEEEEEECCcCHhHHHHCCCC----c--CCEEEEE-eCCcEEEEEcCCC----CHHHHHHHHHHHh
Confidence 555444 46678999999987 3 6866666 8999998887643 5777777776653
No 165
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=94.39 E-value=0.1 Score=30.66 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=36.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.| . +.+++.++|+++
T Consensus 50 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~G-~----~~~~l~~~l~~~ 103 (104)
T 2vim_A 50 EVEFAKVDVDQNEEAAAKYSVT----A--MPTFVFI-KDGKEVDRFSG-A----NETKLRETITRH 103 (104)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEES-S----CHHHHHHHHHHH
T ss_pred CCEEEEEeccCCHHHHHHcCCc----c--ccEEEEE-eCCcEEEEEeC-C----CHHHHHHHHHhh
Confidence 4455444 45567899999987 3 5876555 69999888875 2 567777777653
No 166
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=94.35 E-value=0.089 Score=32.03 Aligned_cols=53 Identities=23% Similarity=0.308 Sum_probs=35.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.| . +.+++.+.|+++
T Consensus 63 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G-~----~~~~l~~~l~~~ 116 (117)
T 2xc2_A 63 DAIFVKVDVDKLEETARKYNIS----A--MPTFIAI-KNGEKVGDVVG-A----SIAKVEDMIKKF 116 (117)
T ss_dssp SSEEEEEETTTSHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEES-S----CHHHHHHHHHHH
T ss_pred CcEEEEEECCccHHHHHHcCCC----c--cceEEEE-eCCcEEEEEeC-C----CHHHHHHHHHHh
Confidence 3444333 35567899999987 4 5875554 89999988875 2 466777777653
No 167
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=94.27 E-value=0.068 Score=32.49 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=38.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|.. +.+++.+.|+++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~i~----~--~Pt~~~~-~~g~~~~~~~G~~----~~~~l~~~l~~~ 116 (121)
T 2i1u_A 62 DLTVAKLDVDTNPETARNFQVV----S--IPTLILF-KDGQPVKRIVGAK----GKAALLRELSDV 116 (121)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHTCSC
T ss_pred CeEEEEEECCCCHHHHHhcCCC----c--CCEEEEE-ECCEEEEEecCCC----CHHHHHHHHHHH
Confidence 3455444 45678899999987 3 6887777 6999988887643 577787777654
No 168
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=94.22 E-value=0.098 Score=31.94 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=36.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+. ++.++|+++..+.|. . .+++.+.|+++
T Consensus 65 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~-~~~~~G~~~~~~~G~----~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 65 NAVFLKVDVDELKPIAEQFSVE----A--MPTF-LFMKEGDVKDRVVGA----I-KEELTAKVGLH 118 (122)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEE-EEEETTEEEEEEESS----C-HHHHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHcCCC----c--ccEE-EEEeCCEEEEEEeCc----C-HHHHHHHHHHH
Confidence 3454443 45678899999987 4 5764 455899999888753 2 66777777664
No 169
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=94.20 E-value=0.096 Score=32.35 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. +.+++.++|+++
T Consensus 67 v~~~~vd~d~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 119 (121)
T 2j23_A 67 VGFYKVDVDEQSQIAQEVGIR----A--MPTFVFF-KNGQKIDTVVGA-----DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTTCHHHHHHHTCC----S--SSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred EEEEEEECcCCHHHHHHcCCC----c--ccEEEEE-ECCeEEeeEcCC-----CHHHHHHHHHHh
Confidence 444433 45677899999987 3 6887777 699999887753 567777777664
No 170
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=94.07 E-value=0.1 Score=32.71 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=38.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.| . +.+++.+.|+++.
T Consensus 68 ~v~~~~vd~d~~~~l~~~~~v~----~--~Pt~~i~-~~G~~~~~~~G-~----~~~~l~~~l~~~l 122 (125)
T 1r26_A 68 TVKFAKVDADNNSEIVSKCRVL----Q--LPTFIIA-RSGKMLGHVIG-A----NPGMLRQKLRDII 122 (125)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEES-S----CHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHcCCC----c--ccEEEEE-eCCeEEEEEeC-C----CHHHHHHHHHHHh
Confidence 4555444 45678899999987 3 5875555 89999888875 2 5677888777653
No 171
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=93.91 E-value=0.13 Score=30.94 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=38.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.| . +.+++.+.|+++.
T Consensus 59 ~~~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~g-~----~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 59 GAIFLKVDVDELKDVAEAYNVE----A--MPTFLFI-KDGEKVDSVVG-G----RKDDIHTKIVALM 113 (118)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC----S--BSEEEEE-ETTEEEEEEES-C----CHHHHHHHHHHHH
T ss_pred CcEEEEEEcccCHHHHHHcCCC----c--CcEEEEE-eCCeEEEEecC-C----CHHHHHHHHHHHh
Confidence 4455444 45678899999987 3 5876666 89999887775 2 5677777777653
No 172
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.12 Score=31.08 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=37.8
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|--+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. ..+++.+.|+++.
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEIS----A--VPYFIII-HKGTILKELSGA-----DPKEYVSLLEDCK 108 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEEEEEECSC-----CHHHHHHHHHHHH
T ss_pred CEEEEEEecccCHHHHHHcCCC----c--ccEEEEE-ECCEEEEEecCC-----CHHHHHHHHHHHH
Confidence 4455444 45578899999987 3 6887777 799999888753 3456777776643
No 173
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=93.71 E-value=0.064 Score=32.15 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=36.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.| . +.+++.+.|+++
T Consensus 57 ~v~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~g-~----~~~~l~~~l~~~ 110 (113)
T 1ti3_A 57 NVTFLKVDVDELKAVAEEWNVE----A--MPTFIFL-KDGKLVDKTVG-A----DKDGLPTLVAKH 110 (113)
T ss_dssp SEEEEEEETTTCHHHHHHHHCS----S--TTEEEEE-ETTEEEEEEEC-C----CTTHHHHHHHHH
T ss_pred CcEEEEEEccccHHHHHhCCCC----c--ccEEEEE-eCCEEEEEEec-C----CHHHHHHHHHHh
Confidence 3454444 45667899999987 3 5877777 79999988876 3 344566666554
No 174
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=93.69 E-value=0.15 Score=30.40 Aligned_cols=52 Identities=6% Similarity=-0.040 Sum_probs=36.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
++.|-.+ .|.+.++++.||+. + .|+.+++ ++|+++..+.|. +.+++.+.|++
T Consensus 52 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~ 104 (107)
T 1gh2_A 52 QAVFLEVDVHQCQGTAATNNIS----A--TPTFQFF-RNKVRIDQYQGA-----DAVGLEEKIKQ 104 (107)
T ss_dssp TSEEEEEETTTSHHHHHHTTCC----S--SSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHH
T ss_pred CcEEEEEECccCHHHHHhcCCC----c--ccEEEEE-ECCeEEEEEeCC-----CHHHHHHHHHH
Confidence 4455444 45678899999987 3 6877777 899998887762 34556666654
No 175
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=93.58 E-value=0.082 Score=32.66 Aligned_cols=56 Identities=20% Similarity=0.316 Sum_probs=40.0
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECC---CCCEEEEEeccCCCCCCHHHHHHHHHhhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDT---KGVLRQITVNDLPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~---~G~V~~~~~~~~~~~~~~~eil~~l~~l~~ 90 (105)
++.|-.+ .|.+.++++.||+. + .|+.++++. +|+++..+.|. ..+++.+.+++...
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~----~--~Pt~~~~~~~~~~G~~~~~~~G~-----~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVS----S--IPALFFVKKEGNEIKTLDQFVGA-----DVSRIKADIEKFKH 113 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCC----S--SSEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHHC-
T ss_pred CeEEEEEECCCCHHHHHhcCCC----C--CCEEEEEeCCCCcceEEEeecCC-----CHHHHHHHHHHhhh
Confidence 4555544 45678899999987 3 699999976 49999988864 35567777766543
No 176
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=92.59 E-value=0.013 Score=34.55 Aligned_cols=46 Identities=17% Similarity=0.286 Sum_probs=32.5
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
.|.+.++++.||+. ..|+.+++ ++|+++..+.|.. +.+++.+.|++
T Consensus 59 ~~~~~~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~~----~~~~l~~~l~~ 104 (106)
T 2yj7_A 59 VDENPNTAAQYGIR------SIPTLLLF-KNGQVVDRLVGAQ----PKEALKERIDK 104 (106)
Confidence 45667888889886 36999999 8999988776533 34555555543
No 177
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=93.45 E-value=0.24 Score=33.64 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=33.8
Q ss_pred CcchHHhhh--------CCccccCCccceeEEEECCCCCEEEEEeccCC----CCCCHHHHHHHHHhh
Q psy13875 33 FKKEIATSY--------GVLIESAGIPLRGLFIIDTKGVLRQITVNDLP----VGRSVEEVLRLVKAF 88 (105)
Q Consensus 33 ~~~~vak~y--------gv~~~~~G~~~ratfiID~~G~V~~~~~~~~~----~~~~~~eil~~l~~l 88 (105)
.+.++++.| |+. | .|+++++|++|++++.-.+-.. ......++|+.+..+
T Consensus 84 e~~~l~~~y~~~~q~~~gv~----g--~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 84 ERPDIDNIYMTVCQIILGRG----G--WPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEI 145 (173)
T ss_dssp TCHHHHHHHHHHHHHHHSCC----C--SSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHcCCC----C--CcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHH
Confidence 346788888 765 4 6999999999999987432111 123577777766543
No 178
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=93.43 E-value=0.03 Score=37.25 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=33.2
Q ss_pred chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC------CCCHHHHHHHHHhh
Q psy13875 35 KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV------GRSVEEVLRLVKAF 88 (105)
Q Consensus 35 ~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~------~~~~~eil~~l~~l 88 (105)
..++..|++. | .|+++++|++|+++....|.... ..+.+++++.+++.
T Consensus 90 ~~~~~~~~v~----~--~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 90 TDKNLSPDGQ----Y--VPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp SCGGGCTTCC----C--SSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred hhhHhhcCCC----C--CCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 4567777764 3 69999999999999988875211 13466666666543
No 179
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=93.26 E-value=0.16 Score=28.74 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=33.5
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.+++++||+. + .|++++ +|++ .+.|.. +.+++.+.|+++
T Consensus 33 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~---~G~~--~~~G~~----~~~~l~~~l~~~ 83 (85)
T 1nho_A 33 KIDVEKIDIMVDREKAIEYGLM----A--VPAIAI---NGVV--RFVGAP----SREELFEAINDE 83 (85)
T ss_dssp SCCEEEECTTTCGGGGGGTCSS----C--SSEEEE---TTTE--EEECSS----CCHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHhCCce----e--eCEEEE---CCEE--EEccCC----CHHHHHHHHHHH
Confidence 4555544 45677899999987 3 688877 8988 455532 456777776553
No 180
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=93.26 E-value=0.084 Score=32.78 Aligned_cols=54 Identities=9% Similarity=-0.047 Sum_probs=38.0
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEE-EEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLR-QITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~-~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+ .|.+.++++.|++. + .|+.+++++.+++. ..+.| .++.++++++|+++
T Consensus 71 v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~~g~~~~~~~~~G----~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 71 FVAARIDGEKYPDVIERMRVS----G--FPTMRYYTRIDKQEPFEYSG----QRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEEEETTTCHHHHHHTTCC----S--SSEEEEECSSCSSSCEECCS----CCCHHHHHHHHHHH
T ss_pred eEEEEEEccccHhHHHhcCCc----c--CCEEEEEeCCCCCCceEecC----CccHHHHHHHHHhc
Confidence 444433 45677999999987 3 69999998777754 23333 35889999888764
No 181
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.20 E-value=0.21 Score=31.63 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=36.3
Q ss_pred hhhCCccccCCccceeEEEECCCCCEEEEEeccCCCC---CCHHHHHHHHHhhhhhhhcCCcccCCCC
Q psy13875 39 TSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVG---RSVEEVLRLVKAFQFVDKHGEGSKRVPS 103 (105)
Q Consensus 39 k~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~---~~~~eil~~l~~l~~~~~~~~~~~~~~~ 103 (105)
+.|++. ..|+.++++ +|+++..+.+....+ ...+++.+.|++........+..+.+.|
T Consensus 74 ~~~~i~------~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~~~~~~~~~~ 134 (135)
T 2dbc_A 74 EHYHDN------CLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEVGAIQSDLEENSGPSS 134 (135)
T ss_dssp SSCCSS------CCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHHTSSCCCSCCCSCSSC
T ss_pred ccCCCC------CCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcCCccccccCCCCCCC
Confidence 566665 369988885 999999988764322 2577777777765443333333333333
No 182
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=93.03 E-value=0.11 Score=35.28 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=40.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.+.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|. .+.+++.++|+++.
T Consensus 146 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~l 201 (210)
T 3apq_A 146 LLRIGAVNCGDDRMLCRMKGVN----S--YPSLFIF-RSGMAAVKYNGD----RSKESLVAFAMQHV 201 (210)
T ss_dssp TBEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-CTTSCCEECCSC----CCHHHHHHHHHHHH
T ss_pred ceEEEEEECCccHHHHHHcCCC----c--CCeEEEE-ECCCceeEecCC----CCHHHHHHHHHHhC
Confidence 3555444 45678899999987 4 6988888 999987776653 46888888887654
No 183
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=92.83 E-value=0.094 Score=32.04 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=30.2
Q ss_pred chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 35 KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 35 ~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
..+++.||+. | .|+++++ ++|+++..+.|. .+.+++.++|+
T Consensus 77 ~~~~~~~~i~----~--~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~ 117 (118)
T 1zma_A 77 QAFRSRYGIP----T--VPGFVHI-TDGQINVRCDSS----MSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHTCC----S--SCEEEEE-ETTEEEEECCTT----CCHHHHHHHHT
T ss_pred HHHHHHcCCC----C--CCeEEEE-ECCEEEEEecCC----CCHHHHHHHhh
Confidence 4788999987 3 6999888 589988766653 35677777664
No 184
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=92.77 E-value=0.067 Score=32.18 Aligned_cols=54 Identities=19% Similarity=0.353 Sum_probs=37.0
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEE--EEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLR--QITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~--~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|--+ .|.+..+++.||+. + .|+.+++ ++|+++ ..+.| ..+.+++.++|+++.
T Consensus 60 v~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~~~g----~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 60 IRLAKVDATEESDLAQQYGVR----G--YPTIKFF-RNGDTASPKEYTA----GREADDIVNWLKKRT 116 (120)
T ss_dssp CBCEEEETTTCCSSHHHHTCC----S--SSEEEEE-ESSCSSSCEECCC----CSSHHHHHHHHHTTS
T ss_pred EEEEEEcCCCCHHHHHHCCCC----c--ccEEEEE-eCCCcCCcccccC----ccCHHHHHHHHHhcc
Confidence 444333 33457899999987 3 6999999 688765 54444 347888888887643
No 185
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=92.49 E-value=0.2 Score=34.70 Aligned_cols=57 Identities=9% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 23 GDLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 23 ~~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
..+.+..+.|.+..+++.||+. + .|+.++++++|++...... ....+.+-..|+.|.
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~----~--~Pslvl~~~~g~~~~~~~~----~~~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVT----D--FPSCYLLFRNGSVSRVPVL----MESRSFYTAYLQRLS 239 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCC----C--SSEEEEEETTSCEEECCCS----SSSHHHHHHHHHTC-
T ss_pred CceEEEEEeCchHHHHHHcCCC----C--CCeEEEEeCCCCeEeeccc----cccHHHHHHHHHhCC
Confidence 3567888888889999999987 3 6999999999999876642 224455555566554
No 186
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=92.41 E-value=0.26 Score=33.83 Aligned_cols=54 Identities=22% Similarity=0.318 Sum_probs=39.6
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|-.+ .|.+..+++.||+. + .|+.+++ ++|+++..+.|. .+.+++.+.|+++.
T Consensus 63 v~~~~vd~d~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 63 LTVAKLNIDQNPGTAPKYGIR----G--IPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDANL 117 (222)
T ss_dssp CEEEEEETTTCTTTGGGGTCC----S--BSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred cEEEEEECCCCHHHHHHcCCC----c--CCEEEEE-ECCeEEEEeccc----cChHHHHHHHHhhc
Confidence 444433 46678999999987 4 6887777 599999888764 36788888887654
No 187
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=91.87 E-value=0.4 Score=30.71 Aligned_cols=59 Identities=7% Similarity=0.025 Sum_probs=38.5
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCC------CCCCHHHHHHHHHhhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLP------VGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~------~~~~~~eil~~l~~l~~ 90 (105)
+.|--+ .|.+.++++.||+. ..|+++++ ++|+++....+... ...+.+++++.|+++..
T Consensus 56 v~~~~vd~d~~~~~~~~~~i~------~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 56 AVIYLVDITEVPDFNKMYELY------DPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EEEEEEETTTCCTTTTSSCSC------SSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred eEEEEEccccCHHHHHHcCCC------CCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 444333 45667899999987 36999888 58888876654211 11247888888887643
No 188
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=91.80 E-value=0.26 Score=33.36 Aligned_cols=54 Identities=17% Similarity=0.087 Sum_probs=38.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+..+++.||+. | .|+.+++ ++|++...+.|.. +.+++.++|+++
T Consensus 170 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~G~~~~~~~G~~----~~~~l~~~l~~~ 224 (226)
T 1a8l_A 170 KILGDMVEAIEYPEWADQYNVM----A--VPKIVIQ-VNGEDRVEFEGAY----PEKMFLEKLLSA 224 (226)
T ss_dssp CEEEEEEEGGGCHHHHHHTTCC----S--SCEEEEE-ETTEEEEEEESCC----CHHHHHHHHHHH
T ss_pred cEEEEEEEcccCHHHHHhCCCc----c--cCeEEEE-eCCceeEEEcCCC----CHHHHHHHHHHh
Confidence 4455444 45667899999987 4 6886665 7999988887643 567787777654
No 189
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=91.51 E-value=0.3 Score=34.33 Aligned_cols=52 Identities=15% Similarity=0.237 Sum_probs=37.4
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
+.|--+ .|.+.++++.||+. | .|+++++ ++|+++..+.|.. +.+.+.+.++.
T Consensus 59 ~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~G~~~~~~~g~~----~~~~l~~~l~~ 111 (287)
T 3qou_A 59 FILAKLDCDAEQMIAAQFGLR----A--IPTVYLF-QNGQPVDGFQGPQ----PEEAIRALLDX 111 (287)
T ss_dssp SEEEEEETTTCHHHHHTTTCC----S--SSEEEEE-ETTEEEEEEESCC----CHHHHHHHHHH
T ss_pred eEEEEEeCccCHHHHHHcCCC----C--CCeEEEE-ECCEEEEEeeCCC----CHHHHHHHHHH
Confidence 455444 46678999999987 4 6999888 7999998887643 45556555544
No 190
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=90.86 E-value=0.091 Score=32.11 Aligned_cols=59 Identities=5% Similarity=0.028 Sum_probs=39.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. + .|+.++++.+|.+ ..+.|......+.+++.+.|+++.
T Consensus 53 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 53 KVRAGKVDCQAYPQTCQKAGIK----A--YPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHH
T ss_pred CeEEEEEeCcCCHHHHHHcCCC----c--cceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHH
Confidence 3455444 35677899999987 3 6999999888874 334442111247788888887653
No 191
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=90.60 E-value=0.19 Score=28.43 Aligned_cols=49 Identities=14% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
++.|-.+ .|.+.+++++||+. | .|+.++ +|++ .+.|. .+.+++.+.|++
T Consensus 34 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~ 83 (85)
T 1fo5_A 34 AVEVEYINVMENPQKAMEYGIM----A--VPTIVI---NGDV--EFIGA----PTKEALVEAIKK 83 (85)
T ss_dssp SEEEEEEESSSSCCTTTSTTTC----C--SSEEEE---TTEE--ECCSS----SSSHHHHHHHHH
T ss_pred ceEEEEEECCCCHHHHHHCCCc----c--cCEEEE---CCEE--eeecC----CCHHHHHHHHHH
Confidence 4455444 45567899999987 3 688777 8887 44442 256777777754
No 192
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=89.61 E-value=0.57 Score=29.84 Aligned_cols=43 Identities=5% Similarity=-0.100 Sum_probs=33.8
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.++..|++. | .|+.++++ +|+.+....|.+ ..++++++|+.+.
T Consensus 67 ~la~~~~V~----g--~PT~i~f~-~G~ev~Ri~G~~----~~~~f~~~L~~~l 109 (116)
T 3dml_A 67 GLELARPVT----F--TPTFVLMA-GDVESGRLEGYP----GEDFFWPMLARLI 109 (116)
T ss_dssp TCBCSSCCC----S--SSEEEEEE-TTEEEEEEECCC----CHHHHHHHHHHHH
T ss_pred hHHHHCCCC----C--CCEEEEEE-CCEEEeeecCCC----CHHHHHHHHHHHH
Confidence 677888876 3 69999998 999999888754 5678888887654
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=89.28 E-value=0.53 Score=37.03 Aligned_cols=58 Identities=9% Similarity=0.216 Sum_probs=41.8
Q ss_pred CCCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhhh
Q psy13875 24 DLKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQFV 91 (105)
Q Consensus 24 ~l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~ 91 (105)
++.+..+.|.+..+++.||+. ..|+.++++++|++....+. . ...+.+-..|+.|...
T Consensus 184 ~v~v~~v~~~~~~l~~kfgV~------~~Pslvl~~~nGk~~~~~v~-~---~~r~~~~~~l~~l~~~ 241 (519)
T 3t58_A 184 AVAVRRVLNTESDLVNKFGVT------DFPSCYLLLRNGSVSRVPVL-V---ESRSFYTSYLRGLPGL 241 (519)
T ss_dssp TEEEEEEETTCHHHHHHHTCC------CSSEEEEEETTSCEEECCCS-S---CSHHHHHHHHTTSTTC
T ss_pred CeeEEEecCchHHHHHHcCCC------CCCeEEEEeCCCceeecccc-c---ccHHHHHHHHHHccCC
Confidence 577888888889999999997 36999999999998766442 1 1234444556665443
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=89.12 E-value=0.77 Score=36.08 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=41.3
Q ss_pred CCCceEEe---eCcchHHhhhCCccccCCccceeEEEECC---CCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLLA---DFKKEIATSYGVLIESAGIPLRGLFIIDT---KGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fplls---D~~~~vak~ygv~~~~~G~~~ratfiID~---~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.+.|--+. |.+.++++.||+. | .|+++++++ +|+++....+ +++.+++.+.|.++.
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~----~--~PTl~~f~~g~~~G~~~~~~~g----~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIA----G--FPTVRFFQAFTKNGSGATLPGA----GANVQTLRMRLIDAL 126 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCC----S--BSEEEEECTTCCSCCCEEECCS----SCCHHHHHHHHHHHH
T ss_pred cEEEEEEECCccccHHHHHHcCCc----c--cCEEEEEcCcccCCCceeEecC----CCCHHHHHHHHHHHH
Confidence 34555543 4578999999997 3 699999997 7876666554 357888888887654
No 195
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.62 E-value=0.4 Score=29.52 Aligned_cols=49 Identities=10% Similarity=0.172 Sum_probs=32.3
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEEEE-EeccCCCCCCHHHHHHHHHhhh
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQI-TVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~-~~~~~~~~~~~~eil~~l~~l~ 89 (105)
|.+..+++.|++. ..|++++++..|++..+ +.+. ..+.+++.++|+++.
T Consensus 68 ~~~~~~~~~~~v~------~~Pt~~~~~~g~~~~~~~~~gg---~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 68 TANDITNDQYKVE------GFPTIYFAPSGDKKNPIKFEGG---NRDLEHLSKFIDEHA 117 (133)
T ss_dssp TTSCCCCSSCCCS------SSSEEEEECTTCTTSCEECCSS---CCSTTHHHHHHHHHS
T ss_pred CcCHHHHhhcCCC------cCCEEEEEeCCCcccceEecCC---CcCHHHHHHHHHHhc
Confidence 3456777888886 36999999988776543 2211 235667777776653
No 196
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=84.38 E-value=1.4 Score=29.78 Aligned_cols=64 Identities=11% Similarity=0.058 Sum_probs=38.9
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc------CCCCCCHHHHHHHHHhhhhhhhcC
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND------LPVGRSVEEVLRLVKAFQFVDKHG 95 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~------~~~~~~~~eil~~l~~l~~~~~~~ 95 (105)
+.|-.+ .|.+.+++..||+. ..|+.++. ++|+.+.+.+|. ....++-+++.+.|++.......|
T Consensus 74 v~f~kVDVDe~~e~a~~y~V~------siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~~g 144 (160)
T 2av4_A 74 CVIYLVDITEVPDFNTMYELY------DPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGARKG 144 (160)
T ss_dssp EEEEEEETTTCCTTTTTTTCC------SSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEEECCCCHHHHHHcCCC------CCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhhcC
Confidence 444444 46678999999987 46888667 788877533111 111224778888887754333333
No 197
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=84.33 E-value=0.95 Score=31.64 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=31.6
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.+.++++.||+. | .|+.|+.|.+|++ ....|. .+.+++.+.|++..
T Consensus 187 ~~~~l~~~~gv~----g--tPt~vi~~~~G~~-~~~~G~----~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 187 DNEKLMDDLGAN----V--TPAIYYMSKENTL-QQAVGL----PDQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHHHHTCC----S--SCEEEEEETTTEE-EEEESS----CCHHHHHHHTTC--
T ss_pred HHHHHHHHcCCC----C--CCEEEEECCCCCE-EEecCC----CCHHHHHHHHHHHH
Confidence 345677888887 4 6999998888975 344443 36788888887643
No 198
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=83.57 E-value=2.6 Score=26.24 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=37.5
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECC-CCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDT-KGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~-~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..++..||+... .+|+..+++. +|+. +... .....+.+++.++|+++.
T Consensus 54 k~~f~~vd~d~~~~~a~~~gi~~~----~iPtl~i~~~~~g~~-~~~~--~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 54 VINFGTIDAKAFGAHAGNLNLKTD----KFPAFAIQEVAKNQK-FPFD--QEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp TSEEEEECTTTTGGGTTTTTCCSS----SSSEEEEECTTTCCB-CCCC--SSSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEchHHhHHHHHHcCCCcc----cCCEEEEEecCcCcc-cCCC--CccccCHHHHHHHHHHHH
Confidence 5677665 4556789999998721 2699888874 5776 4332 101235677877877643
No 199
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=83.08 E-value=2 Score=29.87 Aligned_cols=51 Identities=27% Similarity=0.299 Sum_probs=35.4
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|..+ .|.+..+++.||+. ..|++|+ +|+++ +.|. ++.+++++.|+...
T Consensus 174 ~v~~~~vd~~~~~~~~~~~~V~------~vPt~~i---~G~~~--~~G~----~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 174 VILSEAVEAYENPDIADKYGVM------SVPSIAI---NGYLV--FVGV----PYEEDFLDYVKSAA 225 (243)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC------SSSEEEE---TTEEE--EESC----CCHHHHHHHHHHHH
T ss_pred cEEEEEEECccCHHHHHHcCCe------eeCeEEE---CCEEE--EeCC----CCHHHHHHHHHHHh
Confidence 4555554 33467899999987 3698888 78875 5443 46888888887654
No 200
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=83.00 E-value=1.6 Score=31.77 Aligned_cols=52 Identities=8% Similarity=0.143 Sum_probs=37.8
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+ +|.+.+++++||+. | .|+.+++ ++|++ ..+.| .++.+++.++++..
T Consensus 68 v~~~~Vd~~~~~~l~~~~~v~----~--~Pt~~~~-~~g~~-~~~~G----~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 68 IGFVMVDAKKEAKLAKKLGFD----E--EGSLYVL-KGDRT-IEFDG----EFAADVLVEFLLDL 120 (350)
T ss_dssp EEEEEEETTTTHHHHHHHTCC----S--TTEEEEE-ETTEE-EEECS----CCCHHHHHHHHHTT
T ss_pred cEEEEEeCCCCHHHHHhcCCC----c--cceEEEE-ECCcE-EEecC----CCCHHHHHHHHHHh
Confidence 455433 56678999999997 4 6999999 78884 34444 35788888888664
No 201
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=82.52 E-value=1.4 Score=24.25 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=26.5
Q ss_pred cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHH
Q psy13875 34 KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLV 85 (105)
Q Consensus 34 ~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l 85 (105)
+.+++++||+. + .|++++ +|+++.. |.. ++.+++.+.|
T Consensus 39 ~~~~~~~~~v~----~--~Pt~~~---~G~~~~~--G~~---~~~~~l~~~l 76 (77)
T 1ilo_A 39 EMDQILEAGLT----A--LPGLAV---DGELKIM--GRV---ASKEEIKKIL 76 (77)
T ss_dssp SHHHHHHHTCS----S--SSCEEE---TTEEEEC--SSC---CCHHHHHHHC
T ss_pred CHHHHHHCCCC----c--CCEEEE---CCEEEEc--CCC---CCHHHHHHHh
Confidence 77899999987 3 688777 8987654 422 2566666554
No 202
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=81.87 E-value=1.7 Score=29.20 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=36.7
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|-.+ .|.+.++++.||+. + .|+.++++ +|+++. +.| .++.++++++|++.
T Consensus 183 v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 183 IPLAKVDATAETDLAKRFDVS----G--YPTLKIFR-KGRPYD-YNG----PREKYGIVDYMIEQ 235 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCC----S--SSEEEEEE-TTEEEE-CCS----CCSHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHcCCc----c--cCEEEEEE-CCeEEE-ecC----CCCHHHHHHHHHhh
Confidence 555544 45678999999987 3 68888885 677654 333 45788999888764
No 203
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=80.89 E-value=1.2 Score=29.57 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=29.3
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEe
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITV 69 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~ 69 (105)
++.|-.+ .|.+.++++.|+-. ....+|+++++|.+|+++..+.
T Consensus 85 ~v~~~~v~~d~~~~~~~~~~~~---~v~~iPt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 85 NIELAIISKGRAEDDLRQRLAL---ERIAIPLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp TEEEEEECHHHHHHHTTTTTTC---SSCCSSEEEEECTTCCEEEEEE
T ss_pred CcEEEEEECCCCHHHHHHHHHc---CCCCcCeEEEECCCCCEEEEEc
Confidence 4555554 34556788888621 0125799999999999987774
No 204
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=80.66 E-value=0.49 Score=28.85 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=33.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|-.+ .|.+.++++.||+. + .|+.++ .++|+++..+.+ . +.+++.+.|+++
T Consensus 67 ~v~~~~v~~~~~~~~~~~~~v~----~--~Pt~~~-~~~g~~~~~~~g-~----~~~~l~~~l~~~ 120 (130)
T 1wmj_A 67 GAVFLKVDVDELKEVAEKYNVE----A--MPTFLF-IKDGAEADKVVG-A----RKDDLQNTIVKH 120 (130)
T ss_dssp TBCCEECCTTTSGGGHHHHTCC----S--SCCCCB-CTTTTCCBCCCT-T----CTTTHHHHHHHH
T ss_pred CCEEEEEeccchHHHHHHcCCC----c--cceEEE-EeCCeEEEEEeC-C----CHHHHHHHHHHH
Confidence 3454443 45678899999987 3 576554 489998876654 2 334555556554
No 205
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=80.14 E-value=1.9 Score=29.03 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=36.4
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|--+ .|.+.++++.||+. + .|++++++ +|.++. +.+ .++.+++.+.++.+.
T Consensus 68 ~~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 68 IPVAKIDATSASVLASRFDVS----G--YPTIKILK-KGQAVD-YEG----SRTQEEIVAKVREVS 121 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCC----S--SSEEEEEE-TTEEEE-CCS----CSCHHHHHHHHHHHH
T ss_pred eEEEEEeccCCHHHHHhcCCC----c--CCEEEEEc-CCCccc-ccC----cccHHHHHHHHhhcc
Confidence 444433 45678999999987 4 69988885 666552 333 457888888887654
No 206
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.87 E-value=2.8 Score=25.91 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=31.6
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCC
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLP 73 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~ 73 (105)
+.|--+ .|.+..+++.|++.....-...|+.+++ ++|+++..+.+..+
T Consensus 60 v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 60 LNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILF-QGGKEAMRRPQIDK 108 (137)
T ss_dssp CEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEEESCBCS
T ss_pred eEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEE-ECCEEEEEecCcCc
Confidence 444433 3556789999998511100136998888 79999988887543
No 207
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=79.48 E-value=3.8 Score=24.89 Aligned_cols=40 Identities=28% Similarity=0.287 Sum_probs=28.0
Q ss_pred CccceeEEEECCCCCEEEEEeccCCC-CCCHHHHHHHHHhhh
Q psy13875 49 GIPLRGLFIIDTKGVLRQITVNDLPV-GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 49 G~~~ratfiID~~G~V~~~~~~~~~~-~~~~~eil~~l~~l~ 89 (105)
| ...-.|.||++|+|..+.+-..+. ..=-++.+++++.++
T Consensus 40 G-~V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~~~ 80 (106)
T 2k9k_A 40 G-FVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKKWK 80 (106)
T ss_dssp C-EEEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHHCC
T ss_pred e-EEEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHhCC
Confidence 5 467899999999999988743222 223466778887654
No 208
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=79.34 E-value=3.1 Score=28.50 Aligned_cols=55 Identities=11% Similarity=0.152 Sum_probs=36.5
Q ss_pred CCceEEe---eCcchHHhhhCCccccCCccceeEEEECCCCCE---EEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLLA---DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVL---RQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fplls---D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V---~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|--+. |.+.++++.||+. + .|+.+++++.+++ ..+.+ .+++.+++.+.|.++-
T Consensus 66 v~~~~vd~~~~~~~~l~~~~~v~----~--~Pt~~~~~~g~~~~~g~~~~~----~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 66 LYLAALDCAEETNSAVCRDFNIP----G--FPTVRFFXAFTXNGSGAVFPV----AGADVQTLRERLIDAL 126 (244)
T ss_dssp EEEEEEETTSTTTHHHHHHTTCC----S--SSEEEEECTTCCSSSCEECCC----TTCCHHHHHHHHHHHH
T ss_pred EEEEEEeCCchhhHHHHHHcCCC----c--cCEEEEEeCCCcCCCCeeEec----CCCCHHHHHHHHHHHH
Confidence 4554443 5678999999997 3 6999999874332 11122 2357888888887654
No 209
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=79.31 E-value=3.3 Score=24.49 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=29.6
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.|.+.+++++||+. .|+.++ .+|+.+. +. .+.+++.++|+++.
T Consensus 34 id~~~~l~~~~g~~-------vPtl~~--~~G~~v~---g~----~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 34 IDDDAALESAYGLR-------VPVLRD--PMGRELD---WP----FDAPRLRAWLDAAP 76 (87)
T ss_dssp CTTCHHHHHHHTTT-------CSEEEC--TTCCEEE---SC----CCHHHHHHHHHTCC
T ss_pred CCCCHHHHHHhCCC-------cCeEEE--ECCEEEe---CC----CCHHHHHHHHHHHH
Confidence 44567899999863 687776 6788764 32 25777888887643
No 210
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=78.02 E-value=2.3 Score=31.42 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=38.4
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEE-EeccCCCCCCHHHHHHHHHhhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQI-TVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~-~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+.|--+ +|.+..+++.||+. | .|+.+++ ++|+++.. +.| .++.+++.++++.+.
T Consensus 61 v~~~~Vd~~~~~~l~~~~~v~----~--~Pt~~~f-~~G~~~~~~~~G----~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 61 VVFARVDCDQHSDIAQRYRIS----K--YPTLKLF-RNGMMMKREYRG----QRSVKALADYIRQQK 116 (382)
T ss_dssp EEEEEEETTTCHHHHHHTTCC----E--ESEEEEE-ETTEEEEEECCS----CCSHHHHHHHHHHHH
T ss_pred eEEEEEECCccHHHHHhcCCC----c--CCEEEEE-eCCcEeeeeecC----cchHHHHHHHHHHhc
Confidence 445444 56678999999997 3 6887776 68988764 433 357888888887643
No 211
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=77.48 E-value=4.4 Score=24.48 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=24.9
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHH
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLV 85 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l 85 (105)
.+.++++.||+. | .|+.+| +|++ +.|. ++.+++.+++
T Consensus 54 ~~~~l~~~~~V~----~--~PT~~i---~G~~---~~G~----~~~~~l~~~~ 90 (106)
T 3kp8_A 54 PQAQECTEAGIT----S--YPTWII---NGRT---YTGV----RSLEALAVAS 90 (106)
T ss_dssp CCCHHHHHTTCC----S--SSEEEE---TTEE---EESC----CCHHHHHHHH
T ss_pred hhHHHHHHcCCe----E--eCEEEE---CCEE---ecCC----CCHHHHHHHh
Confidence 567899999997 4 587554 7763 4443 3677776665
No 212
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=76.99 E-value=2.6 Score=28.41 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=34.3
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+.++++.||+. | .|++++ +|++ ..+.|. .+.+++++.|+.+.
T Consensus 167 ~v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~---~G~~-~~~~G~----~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 167 YITSKVIDASENQDLAEQFQVV----G--VPKIVI---NKGV-AEFVGA----QPENAFLGYIMAVY 219 (229)
T ss_dssp TEEEEEEEGGGCHHHHHHTTCC----S--SSEEEE---GGGT-EEEESC----CCHHHHHHHHHHHH
T ss_pred CeEEEEEECCCCHHHHHHcCCc----c--cCEEEE---CCEE-EEeeCC----CCHHHHHHHHHHHh
Confidence 4454433 45567899999987 3 688887 6774 445553 36777887776643
No 213
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=76.94 E-value=4.2 Score=23.94 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=30.9
Q ss_pred HHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC-CCCHHHHHHHHHhhh
Q psy13875 37 IATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV-GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 37 vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~-~~~~~eil~~l~~l~ 89 (105)
.++.-|+. | ...-.|.||++|+|..+.+...+. ..--++.+++++++.
T Consensus 17 ~a~~~~~~----G-~V~v~~~i~~~G~v~~~~v~~ssg~~~ld~aa~~av~~~~ 65 (90)
T 1u07_A 17 RAQALRIE----G-QVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWR 65 (90)
T ss_dssp HHHHHTCC----E-EEEEEEEECTTSCEEEEEEEEEESSSSSHHHHHHHHTTCE
T ss_pred HHHHCCCc----e-EEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHhCC
Confidence 45555654 5 367899999999999988743221 223455677776654
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=76.06 E-value=2.6 Score=31.75 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=38.2
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+ +|.+..+++.||+. | .|+.+++ ++|++...+.| .++.+++.+++...
T Consensus 54 v~~~~vd~~~~~~l~~~~~v~----~--~Ptl~~~-~~g~~~~~~~G----~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 54 VPLAKVDCTANTNTCNKYGVS----G--YPTLKIF-RDGEEAGAYDG----PRTADGIVSHLKKQ 107 (481)
T ss_dssp CCEEEEETTTCHHHHHHTTCC----E--ESEEEEE-ETTEEEEECCS----CSSHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHhcCCC----C--CCEEEEE-eCCceeeeecC----ccCHHHHHHHHHhh
Confidence 555443 56678999999997 4 5876666 78977666654 35788888888664
No 215
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=75.23 E-value=4 Score=25.81 Aligned_cols=52 Identities=15% Similarity=0.083 Sum_probs=33.8
Q ss_pred CCCceEE-eeCcc----hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHH
Q psy13875 24 DLKYPLL-ADFKK----EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRL 84 (105)
Q Consensus 24 ~l~fpll-sD~~~----~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~ 84 (105)
+++|-.| -|... .++..|||.. ..|+.+++ ++|++++..... .-+.+++.++
T Consensus 54 ~v~~~~vdVde~r~~Sn~IA~~~~V~h-----~sPq~il~-k~G~~v~~~SH~---~I~~~~l~~~ 110 (112)
T 3iv4_A 54 DMDGYYLIVQQERDLSDYIAKKTNVKH-----ESPQAFYF-VNGEMVWNRDHG---DINVSSLAQA 110 (112)
T ss_dssp TCCEEEEEGGGGHHHHHHHHHHHTCCC-----CSSEEEEE-ETTEEEEEEEGG---GCSHHHHHHH
T ss_pred CceEEEEEeecCchhhHHHHHHhCCcc-----CCCeEEEE-ECCEEEEEeecc---ccCHHHHHHh
Confidence 4555444 34443 3899999983 36999999 899999886532 1245555444
No 216
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=74.34 E-value=2.3 Score=27.93 Aligned_cols=53 Identities=13% Similarity=0.227 Sum_probs=26.6
Q ss_pred cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh-hhhhc-CCcccCC
Q psy13875 34 KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ-FVDKH-GEGSKRV 101 (105)
Q Consensus 34 ~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~-~~~~~-~~~~~~~ 101 (105)
+...++.+|+. | .|+ |+|| |+.+ ..+ ..+.+++.+.|+.+. ..++. .+.+++.
T Consensus 139 ~~~~a~~~gv~----g--tPt-~vin--g~~~--~~g----~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 193 (195)
T 2znm_A 139 MQKLTEQYRID----S--TPT-VIVG--GKYR--VIF----NNGFDGGVHTIKELVAKVREERKRQTPAV 193 (195)
T ss_dssp HHHHHHHTTCC----S--SSE-EEET--TTEE--ECC----CSHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHcCCC----C--CCe-EEEC--CEEE--EcC----CCCHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 34566777776 4 587 7885 5532 122 135777777777653 33333 4554443
No 217
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=72.76 E-value=3.6 Score=30.28 Aligned_cols=52 Identities=8% Similarity=0.197 Sum_probs=37.0
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+ +|.+..+|+.||+. | .|+.+++. +|++. .+.| .++.+.+++++++.
T Consensus 70 v~~~~Vd~~~~~~l~~~~~V~----~--~PTl~~f~-~G~~~-~y~G----~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 70 VGFGLVDSEKDAAVAKKLGLT----E--EDSIYVFK-EDEVI-EYDG----EFSADTLVEFLLDV 122 (367)
T ss_dssp EEEEEEETTTTHHHHHHHTCC----S--TTEEEEEE-TTEEE-ECCS----CCSHHHHHHHHHHH
T ss_pred ceEEEEeCcccHHHHHHcCCC----c--CceEEEEE-CCcEE-EeCC----CCCHHHHHHHHHHh
Confidence 444433 56678999999998 4 69999984 78763 3333 46888998888664
No 218
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=69.41 E-value=2.3 Score=25.37 Aligned_cols=34 Identities=9% Similarity=0.129 Sum_probs=24.5
Q ss_pred cceeEEEECCCCCE-EEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 51 PLRGLFIIDTKGVL-RQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 51 ~~ratfiID~~G~V-~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
..|++++++++|++ ...+.+ ..+.+++.++|+++
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTYSG----SRTVEDLIKFIAEN 115 (121)
T ss_dssp SSSEEEEECSSCTTSCCCCCC----CSCHHHHHHHHHHT
T ss_pred cCCeEEEEeCcCCCCceEecC----CCCHHHHHHHHHhc
Confidence 47999999988874 344433 34788888888764
No 219
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=68.68 E-value=13 Score=22.97 Aligned_cols=47 Identities=19% Similarity=0.342 Sum_probs=29.3
Q ss_pred eeEEEE-CCCCCEEEEEeccCCCCCCHHHHHHHHHhhhhhhhc-CCcccCCCCCC
Q psy13875 53 RGLFII-DTKGVLRQITVNDLPVGRSVEEVLRLVKAFQFVDKH-GEGSKRVPSGP 105 (105)
Q Consensus 53 ratfiI-D~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~~~~-~~~~~~~~~~~ 105 (105)
+..|-| -++|+..+ +. ..+.+|..+++++|+.+... ...++.+|++|
T Consensus 79 ~~~F~I~~~~~r~~~-l~-----A~s~~e~~~Wi~al~~a~~~~~~~~~~~p~~~ 127 (130)
T 2d9v_A 79 DGLLTVNLREGSRLH-LC-----AETRDDAIAWKTALMEANSTPAPAGATVPSGP 127 (130)
T ss_dssp TTEEEEEETTSCEEE-EE-----CSSHHHHHHHHHHHHHHHTCCCCTTSCCCCCC
T ss_pred CcEEEEEeCCCCEEE-EE-----cCCHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 345644 34677533 32 12688888899988876654 35556777765
No 220
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=67.97 E-value=4.5 Score=30.75 Aligned_cols=53 Identities=9% Similarity=0.167 Sum_probs=37.4
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCE--EEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVL--RQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V--~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+ +|.+..+++.||+. | .|+.+++. +|++ ...+.| .++.+++.+++...
T Consensus 65 v~~~~vd~~~~~~l~~~~~v~----~--~Pt~~~~~-~g~~~~~~~~~G----~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 65 ITLAQIDCTENQDLCMEHNIP----G--FPSLKIFK-NSDVNNSIDYEG----PRTAEAIVQFMIKQ 120 (504)
T ss_dssp CEEEEEETTTCHHHHHHTTCC----S--SSEEEEEE-TTCTTCEEECCS----CCSHHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHhcCCC----c--CCEEEEEe-CCccccceeecC----CCCHHHHHHHHHHh
Confidence 455444 55678999999997 4 69988884 5765 444444 35788898888764
No 221
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=67.55 E-value=5.5 Score=26.69 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=28.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEecc
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVND 71 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~ 71 (105)
++.|--+ .|.+.+++++||+. + .|+..+.+ +|.....+.|.
T Consensus 59 ~v~~~~vd~~~~~~l~~~~~v~----~--~Ptl~~~~-~~~~~~~~~G~ 100 (229)
T 2ywm_A 59 KIKLDIYSPFTHKEETEKYGVD----R--VPTIVIEG-DKDYGIRYIGL 100 (229)
T ss_dssp TEEEEEECTTTCHHHHHHTTCC----B--SSEEEEES-SSCCCEEEESC
T ss_pred ceEEEEecCcccHHHHHHcCCC----c--CcEEEEEC-CCcccceecCC
Confidence 3455443 45678999999997 3 69888885 56655666653
No 222
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=66.42 E-value=11 Score=26.96 Aligned_cols=57 Identities=12% Similarity=0.191 Sum_probs=34.7
Q ss_pred CCceEE-ee--CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEec-------------cCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLL-AD--FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVN-------------DLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpll-sD--~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~-------------~~~~~~~~~eil~~l~~l 88 (105)
+.+-.+ .| .+..+++.||+. | .|+.++++. |+++....+ .....++.+.+++++...
T Consensus 68 ~~~~~v~~d~~~~~~l~~~~~I~----~--~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 68 VQVAAVNCDLNKNKALCAKYDVN----G--FPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR 140 (298)
T ss_dssp SEEEEEETTSTTTHHHHHHTTCC----B--SSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTT
T ss_pred cEEEEEEccCccCHHHHHhCCCC----c--cceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHh
Confidence 444444 34 467999999987 3 699999975 543111110 112246899999988654
No 223
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=66.14 E-value=4.5 Score=30.47 Aligned_cols=54 Identities=11% Similarity=0.271 Sum_probs=37.0
Q ss_pred CCceEEeeCcchHHhhhCCccccCCccceeEEEECCCCCE-EEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 25 LKYPLLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVL-RQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 25 l~fpllsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V-~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+.|--+.....++++.|++. | .|+.++++..|++ ...+.| .++.++++++|++.
T Consensus 405 v~~~~id~~~~~~~~~~~v~----~--~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 405 IVIAKMDATANDVPSPYEVR----G--FPTIYFSPANKKLNPKKYEG----GRELSDFISYLQRE 459 (481)
T ss_dssp EEEEEEETTSSCCCTTCCCC----S--SSEEEEECTTCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred EEEEEEECCchhhHhhCCCc----c--cCEEEEEeCCCeEeeeEeCC----CCCHHHHHHHHHHh
Confidence 44444433345788889887 4 6999999988875 333433 35789999988764
No 224
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=66.14 E-value=7 Score=27.76 Aligned_cols=39 Identities=10% Similarity=0.190 Sum_probs=27.1
Q ss_pred cceeEEEECCCCCEEEEEeccCCCCC-CHHHHHHHHHhhh
Q psy13875 51 PLRGLFIIDTKGVLRQITVNDLPVGR-SVEEVLRLVKAFQ 89 (105)
Q Consensus 51 ~~ratfiID~~G~V~~~~~~~~~~~~-~~~eil~~l~~l~ 89 (105)
.....|.||++|+|..+.+...+... --++.+++++.+.
T Consensus 165 ~V~V~f~Id~dG~V~~v~V~~SSG~~~LD~aAl~AVr~~r 204 (229)
T 2grx_C 165 QVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWR 204 (229)
T ss_dssp EECEEEECCTTSCCEEEEECCCSSSTTSHHHHHHHTTSCC
T ss_pred EEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHhC
Confidence 36789999999999998884332222 2455677777654
No 225
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=66.08 E-value=7.2 Score=31.35 Aligned_cols=54 Identities=13% Similarity=0.293 Sum_probs=37.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. | .|+++++ ++|++ +.+.| .++.+++.++++.+.
T Consensus 487 ~v~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~-~~~~g----~~~~~~l~~fi~~~~ 541 (780)
T 3apo_A 487 QLKVGTLDCTIHEGLCNMYNIQ----A--YPTTVVF-NQSSI-HEYEG----HHSAEQILEFIEDLR 541 (780)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-ETTEE-EEECS----CSCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCHHHHHHcCCC----c--CCeEEEE-cCCce-eeecC----cccHHHHHHHHHhhc
Confidence 4555544 34567899999987 4 6999999 46876 55544 346788888887653
No 226
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=64.42 E-value=2 Score=34.68 Aligned_cols=59 Identities=5% Similarity=0.025 Sum_probs=40.6
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|-.+ .|.+..+++.||+. | .|+++++ ++|+++..+.|......+.+++.++|+++.
T Consensus 707 ~~~~~~vd~~~~~~~~~~~~v~----~--~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l 766 (780)
T 3apo_A 707 KVRAGKVDCQAYPQTCQKAGIK----A--YPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKL 766 (780)
T ss_dssp TCEEEEEETTTCHHHHHHTTCC----S--SSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHT
T ss_pred CceEEEEECCCCHHHHHhcCCC----c--CCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHH
Confidence 4555444 45567899999987 4 6999999 888877666653101347888888887754
No 227
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=62.83 E-value=5.4 Score=27.40 Aligned_cols=57 Identities=12% Similarity=0.129 Sum_probs=37.2
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC---CCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV---GRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~---~~~~~eil~~l~~l 88 (105)
++.|--+ .| +..+++.|++. ..|+.+++ ++|+++..+.|.... .-..+++.+.|...
T Consensus 151 ~v~f~~vd~~-~~~l~~~~~i~------~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 151 MVKFCKIRAS-NTGAGDRFSSD------VLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp TSEEEEEEHH-HHTCSTTSCGG------GCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CeEEEEEECC-cHHHHHHCCCC------CCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 4455433 33 55678888876 36998888 599999888875432 12356777777653
No 228
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=60.50 E-value=10 Score=26.80 Aligned_cols=48 Identities=10% Similarity=0.065 Sum_probs=33.2
Q ss_pred chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCC---CCCHHHHHHHHHhhh
Q psy13875 35 KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPV---GRSVEEVLRLVKAFQ 89 (105)
Q Consensus 35 ~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~---~~~~~eil~~l~~l~ 89 (105)
..+++.|++. + .|+.+++ ++|+++..++|.... ....+++...|....
T Consensus 175 ~~l~~~~~I~----~--~PTll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 175 TGAGDRFSSD----V--LPTLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp HCCTTSSCTT----T--CSEEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred HHHHHHCCCC----C--CCEEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 4577778876 3 6888777 599999998875422 235677777776643
No 229
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=60.46 E-value=8.3 Score=21.52 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=22.3
Q ss_pred CCCceEEe---e-CcchHHhhhCCccccCCccceeEEEECCCCCEEEE
Q psy13875 24 DLKYPLLA---D-FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQI 67 (105)
Q Consensus 24 ~l~fplls---D-~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~ 67 (105)
+++|.++. | .+.++++.||+. ..|+.|+ +|+++++
T Consensus 30 ~~~~~~~~v~~~~~~~~~~~~~gv~------~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 30 KYTVEIVHLGTDKARIAEAEKAGVK------SVPALVI---DGAAFHI 68 (80)
T ss_dssp TEEEEEEETTTCSSTHHHHHHHTCC------EEEEEEE---TTEEEEE
T ss_pred CCeEEEEEecCChhhHHHHHHcCCC------cCCEEEE---CCEEEEe
Confidence 34555442 2 246788899976 4687766 7887653
No 230
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=58.80 E-value=6.3 Score=23.91 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=28.4
Q ss_pred eCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 32 DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 32 D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
|.+..+++.||+. + .|++++++..+++. +.. ..+.+++.+.|+
T Consensus 79 d~~~~~~~~~~i~----~--~Pt~~~~~~~~~~~----g~~--~~~~~~l~~~i~ 121 (123)
T 1wou_A 79 DPNNDFRKNLKVT----A--VPTLLKYGTPQKLV----ESE--CLQANLVEMLFS 121 (123)
T ss_dssp CTTCHHHHHHCCC----S--SSEEEETTSSCEEE----GGG--GGCHHHHHHHHH
T ss_pred chhHHHHHHCCCC----e--eCEEEEEcCCceEe----ccc--cCCHHHHHHHHh
Confidence 6788999999987 3 69999998733332 221 234566666654
No 231
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=58.72 E-value=25 Score=21.62 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=30.7
Q ss_pred HhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCC---CCHHHHHHHHHh
Q psy13875 38 ATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVG---RSVEEVLRLVKA 87 (105)
Q Consensus 38 ak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~---~~~~eil~~l~~ 87 (105)
++.|++. ..|+.++. ++|+++....|....+ -..+++...|.+
T Consensus 66 ~~~~~v~------~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 66 IQHYHDN------CLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp STTCCGG------GCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred HHHCCCC------CCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 5777776 47888777 8999999999865432 356666666654
No 232
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=55.98 E-value=32 Score=24.97 Aligned_cols=32 Identities=22% Similarity=0.185 Sum_probs=23.5
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccC
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~ 72 (105)
++++++|.. | ..|.=|++|++|++....+++.
T Consensus 285 ~~~~aLg~~----G-~~~VDf~~~~dg~~~vlEvNt~ 316 (357)
T 4fu0_A 285 TIYKALGCS----G-FSRVDMFYTPSGEIVFNEVNTI 316 (357)
T ss_dssp HHHHHTTCC----E-EEEEEEEECTTCCEEEEEEESS
T ss_pred HHHHHhCCc----c-eEEEEEEEeCCCCEEEEEEeCC
Confidence 344555653 4 3688999999999988888754
No 233
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=54.87 E-value=8.5 Score=27.69 Aligned_cols=48 Identities=8% Similarity=-0.006 Sum_probs=32.9
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCC-CCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTK-GVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~-G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.|.+...++.|++. | .|+.++++++ |+....+.| .++.++++++|+..
T Consensus 307 vd~~~~~~~~~~v~----~--~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 307 MDSTANEVEAVKVH----S--FPTLKFFPASADRTVIDYNG----ERTLDGFKKFLESG 355 (361)
T ss_dssp EETTTCBCSSCCCC----S--SSEEEEECSSSSCCCEECCS----CSSHHHHHHHHTTT
T ss_pred EECCccchhhcCCc----c--cCeEEEEECCCCcceeEecC----CCCHHHHHHHHHhc
Confidence 45544447788876 4 6999999655 555555544 45889998888764
No 234
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=51.28 E-value=10 Score=22.27 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=13.4
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
=+.+++|.+|+|.++-
T Consensus 16 ~gviv~D~~g~I~~~N 31 (121)
T 4hi4_A 16 ANVMIADNDLNIIYMN 31 (121)
T ss_dssp SEEEEEETTCBEEEEC
T ss_pred ccEEEEcCCCeEEEec
Confidence 4678999999999864
No 235
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=50.36 E-value=12 Score=19.54 Aligned_cols=15 Identities=7% Similarity=0.339 Sum_probs=12.4
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
+.+++|.+|+|++.-
T Consensus 4 ~i~~~d~~g~i~~~N 18 (96)
T 3a0s_A 4 AIITLSKDGRITEWN 18 (96)
T ss_dssp EEEEEETTSBEEEEC
T ss_pred eEEEEcCCCCEeehh
Confidence 468999999998764
No 236
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=50.14 E-value=25 Score=22.37 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=24.0
Q ss_pred CccceeEEEECCCCCEEEEEeccCCCCCCHH-HHHHHHHh
Q psy13875 49 GIPLRGLFIIDTKGVLRQITVNDLPVGRSVE-EVLRLVKA 87 (105)
Q Consensus 49 G~~~ratfiID~~G~V~~~~~~~~~~~~~~~-eil~~l~~ 87 (105)
|+.....|-||++|+|..+.+...+-....+ ..+++++.
T Consensus 51 ~~~~~V~v~l~~dG~v~~v~v~~SSG~~~lD~AAl~AV~r 90 (129)
T 1lr0_A 51 GMSVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRN 90 (129)
T ss_dssp TCCEEEEEEECTTSBEEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHH
Confidence 3445678899999999998874332222233 34455543
No 237
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.49 E-value=14 Score=20.93 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=13.6
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
-+.+++|.+|+|+++--
T Consensus 18 ~~i~~~D~~g~I~~~N~ 34 (115)
T 3b33_A 18 TATLILDDGLAIRYANP 34 (115)
T ss_dssp SEEEEECTTCBEEEECH
T ss_pred ceEEEECCCCcEEEECH
Confidence 35789999999998643
No 238
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=48.58 E-value=19 Score=25.26 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=31.4
Q ss_pred cchHHhhhCCccccCCccceeEEEECCCCC--EEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 34 KKEIATSYGVLIESAGIPLRGLFIIDTKGV--LRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 34 ~~~vak~ygv~~~~~G~~~ratfiID~~G~--V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
+..+++.||+..+ ..|+.+++ ++|. ....+.| .++.+++.++|+..
T Consensus 70 ~~~l~~~~~V~~~----~~PTl~~f-~~G~~~~~~~y~G----~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 70 NMELSEKYKLDKE----SYPVFYLF-RDGDFENPVPYTG----AVKVGAIQRWLKGQ 117 (240)
T ss_dssp SHHHHHHTTCCGG----GCSEEEEE-ETTCSSCCEECCS----CSCHHHHHHHHHHT
T ss_pred hHHHHHHcCCCCC----CCCEEEEE-eCCCcCcceeecC----CCCHHHHHHHHHHh
Confidence 6789999998621 26888888 5676 2233333 45788888888764
No 239
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=48.20 E-value=13 Score=25.14 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=28.1
Q ss_pred eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 31 ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 31 sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.|.+.++++.||+. | .|+.|+.| |. ...|. .+.+++.+.|+++.
T Consensus 167 v~~~~~l~~~~gV~----g--tPt~v~~d--G~---~~~G~----~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 167 IADHYALGVQLGVS----G--TPAVVLSN--GT---LVPGY----QPPKEMKEFLDEHQ 210 (216)
T ss_dssp HHHHHHHHHHHTCC----S--SSEEECTT--SC---EEESC----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC----c--cCEEEEcC--Ce---EecCC----CCHHHHHHHHHHhh
Confidence 35567889999987 5 58776544 53 23342 25677777776654
No 240
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=47.11 E-value=20 Score=24.11 Aligned_cols=57 Identities=4% Similarity=-0.054 Sum_probs=37.5
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEE----------EEEeccCC--CCCCHHHHHHHHHh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLR----------QITVNDLP--VGRSVEEVLRLVKA 87 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~----------~~~~~~~~--~~~~~~eil~~l~~ 87 (105)
++.|--+ .|.+.+++++|||. .+|+.+++-+.+... ...+ .+. .++..+.+.++|.+
T Consensus 81 ~v~f~kvD~d~~~~la~~~~I~------siPtl~~F~~g~~~~~~~~~~~~~~~~~y-~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 81 LNLFFTVDVNEVPQLVKDLKLQ------NVPHLVVYPPAESNKQSQFEWKTSPFYQY-SLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp CEEEEEEETTTCHHHHHHTTCC------SSCEEEEECCCCGGGGGGCCTTTSCCEEE-CCCGGGTTCHHHHHHHHHH
T ss_pred CEEEEEEECccCHHHHHHcCCC------CCCEEEEEcCCCCCCccccccccCCccee-ecccCCCcCHHHHHHHHHH
Confidence 4555544 55678999999998 479999995554332 1111 222 25788899888865
No 241
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=46.18 E-value=35 Score=20.89 Aligned_cols=48 Identities=10% Similarity=0.053 Sum_probs=29.1
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHH
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLV 85 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l 85 (105)
++.|..+ -|.+.+++.+||+. .|+.+++ .+|+++. .+.. +.+++.++|
T Consensus 58 ~i~~~~vDId~d~~l~~~ygv~-------VP~l~~~-~dG~~v~--~g~~----~~~~L~~~L 106 (107)
T 2fgx_A 58 WFELEVINIDGNEHLTRLYNDR-------VPVLFAV-NEDKELC--HYFL----DSDVIGAYL 106 (107)
T ss_dssp CCCCEEEETTTCHHHHHHSTTS-------CSEEEET-TTTEEEE--CSSC----CCHHHHHHH
T ss_pred CCeEEEEECCCCHHHHHHhCCC-------CceEEEE-ECCEEEE--ecCC----CHHHHHHHh
Confidence 4677665 34567888888863 6877655 4687652 2322 445555554
No 242
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=43.59 E-value=27 Score=22.09 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=23.4
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.+...++.+|+. | .| ||+| +|+ ...|. .+.+++.+.|+++
T Consensus 132 ~~~~~a~~~gv~----g--tP-t~~i--~g~---~~~G~----~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 132 QSMALAQKLGFN----G--TP-SFVV--EDA---LVPGF----VEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHHTCC----S--SS-EEEE--TTE---EECSC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc----c--CC-EEEE--CCE---EeeCC----CCHHHHHHHHHHH
Confidence 345667778876 5 57 4555 453 22332 3677777777654
No 243
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=43.40 E-value=20 Score=23.11 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=23.5
Q ss_pred chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 35 KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 35 ~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
...++.+|+. | .|+ |+|| |+.. ..+ . +.+++.+.|+.+.
T Consensus 145 ~~~a~~~gv~----g--tPt-~vin--g~~~--~~g----~-~~~~l~~~i~~~~ 183 (193)
T 2rem_A 145 RAYALKVRPV----G--TPT-IVVN--GRYM--VTG----H-DFEDTLRITDYLV 183 (193)
T ss_dssp HHHHHHHCCS----S--SSE-EEET--TTEE--ECC----S-SHHHHHHHHHHHH
T ss_pred HHHHHHhCCC----C--CCe-EEEC--CEEE--ecC----C-CHHHHHHHHHHHH
Confidence 4556677766 4 577 7885 5432 111 1 6777877777654
No 244
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=43.33 E-value=42 Score=19.60 Aligned_cols=37 Identities=22% Similarity=-0.013 Sum_probs=22.2
Q ss_pred eeEEEEC-CCCCEEEEEeccCCCCCCHHHHHHHHHhhhhhhhcC
Q psy13875 53 RGLFIID-TKGVLRQITVNDLPVGRSVEEVLRLVKAFQFVDKHG 95 (105)
Q Consensus 53 ratfiID-~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~~~~~ 95 (105)
+-.|.|- ++++..+... .+.++..+++.+|+.+....
T Consensus 66 ~~~F~i~~~~~r~~~l~a------~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 66 MFVFKITTTKQQDHFFQA------AFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp SSEEEEEETTTEEEEEEC------SSHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCCCEEEEEC------CCHHHHHHHHHHHHHHHhcc
Confidence 4466664 4455444322 26788888888887665543
No 245
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=43.12 E-value=19 Score=20.85 Aligned_cols=17 Identities=12% Similarity=0.198 Sum_probs=13.5
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
=..+++|.+|+|+++--
T Consensus 23 ~~i~~~D~~g~i~~~N~ 39 (118)
T 3fg8_A 23 LGFMALDEDLRIIYVNS 39 (118)
T ss_dssp CEEEEECTTCBEEEECH
T ss_pred ceEEEECCCCeEEEECH
Confidence 35789999999998753
No 246
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=42.52 E-value=35 Score=22.20 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=16.5
Q ss_pred ceeEEEECCCCCEEEEEecc
Q psy13875 52 LRGLFIIDTKGVLRQITVND 71 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~~ 71 (105)
+.+.||+|.+|+++....+.
T Consensus 2 I~~i~Il~~~Gk~~lsk~y~ 21 (158)
T 1w63_Q 2 MRFMLLFSRQGKLRLQKWYL 21 (158)
T ss_dssp EEEEEEECSSSCEEEEEESS
T ss_pred eEEEEEECCCCCEEEEEeCC
Confidence 46889999999988887654
No 247
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=42.31 E-value=20 Score=19.86 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=12.8
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
-+.+++|.+|+|+++-
T Consensus 24 ~~i~~~d~~g~i~~~N 39 (118)
T 3olo_A 24 EASFCLGDNWQFLYVN 39 (118)
T ss_dssp SEEEEECTTSBEEEEC
T ss_pred ceEEEECCCCcEEEEH
Confidence 3578999999998754
No 248
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=41.23 E-value=19 Score=23.13 Aligned_cols=41 Identities=10% Similarity=0.193 Sum_probs=25.4
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.+.+++++||+. | .|+.+| .+|++ ..|.. ..+++.++|++.
T Consensus 97 ~~~~la~~~gI~----g--tPt~vi--~nG~~---i~G~~----~~~~l~~~i~~~ 137 (147)
T 3gv1_A 97 ETTSLGEQFGFN----G--TPTLVF--PNGRT---QSGYS----PMPQLEEIIRKN 137 (147)
T ss_dssp HHHHHHHHTTCC----S--SCEEEC--TTSCE---EESCC----CTTHHHHHHHHT
T ss_pred HHHHHHHHhCCC----c--cCEEEE--ECCEE---eeCCC----CHHHHHHHHHHH
Confidence 456788888887 4 476665 57763 33432 455666666553
No 249
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=40.96 E-value=39 Score=21.27 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=23.6
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
..++.+|+. | .| ||||| |+ |+..+ . ...+.+++++.|+.|-
T Consensus 141 ~~a~~~gv~----g--TP-tfiIN--Gk--y~v~~-~-~~~s~e~~~~~i~~Ll 181 (184)
T 4dvc_A 141 KQFQDSGLT----G--VP-AVVVN--NR--YLVQG-Q-SAKSLDEYFDLVNYLL 181 (184)
T ss_dssp HHHHHHTCC----S--SS-EEEET--TT--EEECG-G-GCSSHHHHHHHHHHHT
T ss_pred HHHHHcCCC----c--CC-EEEEC--CE--EeeCC-c-CCCCHHHHHHHHHHHH
Confidence 445566655 4 46 57774 65 22221 1 1347888888888764
No 250
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=40.87 E-value=18 Score=22.22 Aligned_cols=17 Identities=12% Similarity=0.520 Sum_probs=14.0
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
-+.+++|.+|+|+++--
T Consensus 18 d~i~~~D~~g~I~~~N~ 34 (129)
T 3mfx_A 18 EAMILVNANGFIRSCNQ 34 (129)
T ss_dssp SEEEEEETTSBEEEECH
T ss_pred ceEEEECCCCEEEeEhH
Confidence 46789999999998754
No 251
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=40.35 E-value=19 Score=20.27 Aligned_cols=16 Identities=19% Similarity=0.503 Sum_probs=13.1
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
=..+++|.+|+|++.-
T Consensus 30 ~~i~~~d~~g~i~~~N 45 (125)
T 3fc7_A 30 DGIVHLTTNGTILSVN 45 (125)
T ss_dssp CEEEEEETTSBEEEEC
T ss_pred CeEEEEcCCCeEEEEC
Confidence 4678999999998764
No 252
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=40.26 E-value=22 Score=20.34 Aligned_cols=15 Identities=20% Similarity=0.166 Sum_probs=12.8
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
+.+++|.+|+|+++-
T Consensus 17 ~i~~~d~~g~i~~~N 31 (120)
T 2gj3_A 17 AISITDLKANILYAN 31 (120)
T ss_dssp EEEEECTTCBEEEEC
T ss_pred eEEEECCCCCEEeeh
Confidence 678999999999864
No 253
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=40.23 E-value=51 Score=21.54 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=19.9
Q ss_pred ceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 52 LRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
.|+.+|. .+|+.+....|. ...+++.+.|+++.
T Consensus 177 ~Pt~~i~-~~G~~~~~~~G~----~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 177 FPALVVE-SGTDRYLITTGY----RPIEALRQLLDTWL 209 (216)
T ss_dssp SSEEEEE-ETTEEEEEESSC----CCHHHHHHHHHHHH
T ss_pred cceEEEE-ECCEEEEeccCC----CCHHHHHHHHHHHH
Confidence 5776654 467644344332 35778888887654
No 254
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=40.10 E-value=15 Score=22.17 Aligned_cols=15 Identities=27% Similarity=0.246 Sum_probs=12.2
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
-..|||++|+|++--
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 367899999999854
No 255
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=39.76 E-value=20 Score=20.27 Aligned_cols=15 Identities=20% Similarity=0.381 Sum_probs=13.0
Q ss_pred eEEEECCC-CCEEEEE
Q psy13875 54 GLFIIDTK-GVLRQIT 68 (105)
Q Consensus 54 atfiID~~-G~V~~~~ 68 (105)
+.+++|.+ |+|+++-
T Consensus 10 ~i~~~d~~~g~I~~~N 25 (114)
T 1ll8_A 10 AIFTVDAKTTEILVAN 25 (114)
T ss_dssp EEEEEETTTCBEEEEC
T ss_pred eEEEEECCCCeEEEeh
Confidence 78999999 9999864
No 256
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.01 E-value=83 Score=20.83 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=24.6
Q ss_pred cceeEEEECCCC---CEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 51 PLRGLFIIDTKG---VLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 51 ~~ratfiID~~G---~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
..|...||++.| .|+.+..|.. +.++++..|..
T Consensus 130 ~~P~l~ii~~~~~~~~vl~~~~G~~----~~~~ll~~L~~ 165 (178)
T 2ec4_A 130 QFPLFLIIMGKRSSNEVLNVIQGNT----TVDELMMRLMA 165 (178)
T ss_dssp TCSEEEEECCCSSCCCEEEEECSCC----CHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCceEEEEEEeCCC----CHHHHHHHHHH
Confidence 369999998774 7778777654 68888877654
No 257
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=38.70 E-value=21 Score=20.40 Aligned_cols=16 Identities=19% Similarity=0.636 Sum_probs=12.8
Q ss_pred eEEEECCCCCEEEEEe
Q psy13875 54 GLFIIDTKGVLRQITV 69 (105)
Q Consensus 54 atfiID~~G~V~~~~~ 69 (105)
+.+++|.+|+|++.--
T Consensus 5 ~i~~~d~~g~i~~~N~ 20 (119)
T 2vv6_A 5 AMIVIDGHGIIQLFST 20 (119)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCeEEEEhH
Confidence 5688999999987643
No 258
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=38.59 E-value=20 Score=22.88 Aligned_cols=18 Identities=0% Similarity=0.137 Sum_probs=14.9
Q ss_pred eeEEEECCCCCEEEEEec
Q psy13875 53 RGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 53 ratfiID~~G~V~~~~~~ 70 (105)
=..+++|++|+|++.-..
T Consensus 30 ~gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 30 LEITFVNKDDIFQYYNDS 47 (151)
T ss_dssp SEEEEEETTSBEEEECCC
T ss_pred CceEEEcCCCeEEEEeCC
Confidence 367899999999998654
No 259
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=38.36 E-value=46 Score=25.26 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=25.8
Q ss_pred EeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEec
Q psy13875 30 LADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 30 lsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~ 70 (105)
+.|..+.++++||+. -...+||=|||-|.++...
T Consensus 483 ~~d~~~~~~~~~~~~-------~~~~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 483 LTDPESAVSERYGIG-------KAGASLVRPDGIVAWRTDE 516 (535)
T ss_dssp BBCSSCCHHHHHTCT-------TTCEEEECTTSBEEEEESS
T ss_pred cccCcchHHHHhCCC-------CCceEeeCCCceeEEecCC
Confidence 346667777777765 3568999999999988753
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=36.76 E-value=65 Score=18.92 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=27.4
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCC-ccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAG-IPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G-~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
+++|..+ -|.+.+..+.+--.. .| .+.|..||- ||.+. .+ .+.+++.++|+++.
T Consensus 28 gi~y~~idi~~d~~~~~~~~~~~--~G~~tVP~I~i~--Dg~~l---~~-----~~~~el~~~L~el~ 83 (92)
T 2lqo_A 28 RIAYDEVDIEHNRAAAEFVGSVN--GGNRTVPTVKFA--DGSTL---TN-----PSADEVKAKLVKIA 83 (92)
T ss_dssp TCCCEEEETTTCHHHHHHHHHHS--SSSSCSCEEEET--TSCEE---ES-----CCHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCHHHHHHHHHHc--CCCCEeCEEEEe--CCEEE---eC-----CCHHHHHHHHHHhc
Confidence 7788865 233433333221000 12 257888774 56653 22 35677766665543
No 261
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=36.62 E-value=27 Score=20.10 Aligned_cols=15 Identities=33% Similarity=0.806 Sum_probs=12.3
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
..|++|.+|+|+++-
T Consensus 23 ~i~~~d~~g~i~~vN 37 (117)
T 2r78_A 23 GIFIMDAEGHYLDVN 37 (117)
T ss_dssp EEEEECTTSBEEEEC
T ss_pred eEEEECCCCCEEEec
Confidence 568999999998754
No 262
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=36.48 E-value=32 Score=23.08 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=26.3
Q ss_pred CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 33 FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 33 ~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
.+.++++.||+. | .|+.|+ .+|+. ..| ..+.+++.++|++.
T Consensus 169 ~~~~l~~~~gV~----g--TPt~vi--~nG~~---~~G----~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 169 KHYELGIQFGVR----G--TPSIVT--STGEL---IGG----YLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHHHTCC----S--SCEEEC--TTSCC---CCS----CCCHHHHHHHHHHC
T ss_pred HHHHHHHHcCCC----c--CCEEEE--eCCEE---ecC----CCCHHHHHHHHHhc
Confidence 456778889987 5 587766 46751 222 23677888777654
No 263
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=36.08 E-value=46 Score=21.07 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=16.3
Q ss_pred ceeEEEECCCCCEEEEEecc
Q psy13875 52 LRGLFIIDTKGVLRQITVND 71 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~~ 71 (105)
+.+.||+|++|+++....+.
T Consensus 2 I~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 2 IRFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEEETTSCEEEEEECS
T ss_pred eEEEEEEcCCCCEEEEEeCC
Confidence 46889999999988877653
No 264
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=34.43 E-value=67 Score=22.51 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=36.3
Q ss_pred CCCceEE-eeC-----cchHHhhhCCccccCCccceeEEEECCCCCE--EEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADF-----KKEIATSYGVLIESAGIPLRGLFIIDTKGVL--RQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~-----~~~vak~ygv~~~~~G~~~ratfiID~~G~V--~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|--+ +|. +..+++.|||.. -..|+.++.- |.+ ...+ .....++.+++.++|+..
T Consensus 66 ~v~~akVD~d~~g~~~n~~la~~~~V~~----~~~PTl~~F~--G~~~~~~~y--~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 66 DLLIATVGVKDYGELENKALGDRYKVDD----KNFPSIFLFK--GNADEYVQL--PSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp SEEEEEEEECSSTTCTTHHHHHHTTCCT----TSCCEEEEES--SSSSSEEEC--CTTSCCCHHHHHHHHHHH
T ss_pred CeEEEEEECCcccccccHHHHHHhCCCc----CCCCeEEEEe--CCcCcceee--cccCCCCHHHHHHHHHHh
Confidence 4555544 365 678999999872 1369998884 773 2222 001246888898888764
No 265
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=34.05 E-value=25 Score=22.46 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=13.9
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
=+.+++|++|+|++.--
T Consensus 33 ~gi~v~D~~g~I~~~N~ 49 (152)
T 3mxq_A 33 FALCIVRNDYVIVKVNE 49 (152)
T ss_dssp CEEEEEETTSBEEEECH
T ss_pred CCEEEEcCCCEEEEECH
Confidence 36789999999998754
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=33.41 E-value=53 Score=25.10 Aligned_cols=50 Identities=14% Similarity=0.148 Sum_probs=34.7
Q ss_pred CCCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhh
Q psy13875 24 DLKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAF 88 (105)
Q Consensus 24 ~l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l 88 (105)
++.|..+ .|...++++.||+. +.|+.|+ +|+.+.. +. ...++++++|+..
T Consensus 148 ~v~~~~vd~~~~~~~~~~~~i~------svPt~~i---~g~~~~~--G~----~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 RIKHTAIDGGTFQNEITERNVM------GVPAVFV---NGKEFGQ--GR----MTLTEIVAKVDTG 198 (521)
T ss_dssp TEEEEEEETTTCHHHHHHTTCC------SSSEEEE---TTEEEEE--SC----CCHHHHHHHHCCS
T ss_pred ceEEEEEechhhHHHHHHhCCC------ccCEEEE---CCEEEec--CC----CCHHHHHHHHhhc
Confidence 4566554 34567899999987 4798877 7876543 42 3678888888665
No 267
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=33.24 E-value=34 Score=19.40 Aligned_cols=15 Identities=13% Similarity=0.423 Sum_probs=12.3
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
..+++|.+|+|+++-
T Consensus 29 ~i~~~d~~g~i~~~N 43 (126)
T 3bwl_A 29 MIDVLDADGTICEVN 43 (126)
T ss_dssp EEEEECTTCBEEEEC
T ss_pred EEEEEcCCCCEEEEc
Confidence 468899999998764
No 268
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=33.06 E-value=29 Score=20.18 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=13.3
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
=+.+++|.+|+|++.--
T Consensus 27 d~i~~~d~~g~i~~~N~ 43 (130)
T 1d06_A 27 DATVVSATDGTIVSFNA 43 (130)
T ss_dssp SEEEEEETTSBEEEECH
T ss_pred CeEEEECCCCeEEEEcH
Confidence 36789999999987543
No 269
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=32.57 E-value=75 Score=18.43 Aligned_cols=50 Identities=4% Similarity=0.094 Sum_probs=29.9
Q ss_pred CCCceEE-ee--CcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 24 DLKYPLL-AD--FKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 24 ~l~fpll-sD--~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
++.|..+ -| .+.++++.|| . ..|+. ++ +|+.. ..+. .+.+++.++|+++.
T Consensus 43 ~i~~~~vdi~~~~~~el~~~~g-~------~vP~l-~~--~g~~~--~~~g----~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 43 RFILQEVDITLPENSTWYERYK-F------DIPVF-HL--NGQFL--MMHR----VNTSKLEKQLRKLS 95 (100)
T ss_dssp SSEEEEEETTSSTTHHHHHHSS-S------SCSEE-EE--SSSEE--EESS----CCHHHHHHHHHSSS
T ss_pred CCeEEEEECCCcchHHHHHHHC-C------CCCEE-EE--CCEEE--EecC----CCHHHHHHHHHHHH
Confidence 4566554 22 4567888998 6 35754 45 46654 2322 35777888887643
No 270
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=32.57 E-value=35 Score=22.52 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=19.8
Q ss_pred eEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 54 GLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 54 atfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
-||+|+.+|+.+....+ ....+++++.|+.+.
T Consensus 171 Pt~~v~~~~~~~~~~~g----~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 171 PSLVLQINDAYFPIEVD----YLSTEPTLKLIRERI 202 (208)
T ss_dssp SEEEEEETTEEEEECCC----SSCSHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEeeCC----CCCHHHHHHHHHHHH
Confidence 35677777775543333 235778888887754
No 271
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=32.15 E-value=61 Score=20.42 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=22.1
Q ss_pred cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 34 KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 34 ~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
+.+.++.+|+. | .|+ |+|| |+. ..|. ...+++.+.|+
T Consensus 138 ~~~~a~~~gv~----g--tPt-~vvn--g~~---~~G~----~~~~~l~~~i~ 174 (175)
T 1z6m_A 138 VIAEANAAHIQ----F--VPT-IIIG--EYI---FDES----VTEEELRGYIE 174 (175)
T ss_dssp HHHHHHHHTCC----S--SCE-EEET--TEE---ECTT----CCHHHHHHHHT
T ss_pred HHHHHHHcCCC----C--cCe-EEEC--CEE---ccCC----CCHHHHHHHhc
Confidence 44667777876 5 577 7774 542 2232 35677776664
No 272
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=31.87 E-value=17 Score=28.40 Aligned_cols=33 Identities=9% Similarity=0.156 Sum_probs=24.2
Q ss_pred CCceEE-eeCcchHHhhhCCccccCCccceeEEEECCCCC
Q psy13875 25 LKYPLL-ADFKKEIATSYGVLIESAGIPLRGLFIIDTKGV 63 (105)
Q Consensus 25 l~fpll-sD~~~~vak~ygv~~~~~G~~~ratfiID~~G~ 63 (105)
+.|--+ .|.+.+++++||+. + .|+.+++++.|.
T Consensus 83 v~f~~VD~d~~~~la~~y~V~----~--~PTlilf~~gg~ 116 (470)
T 3qcp_A 83 ATAAAVNCASEVDLCRKYDIN----F--VPRLFFFYPRDS 116 (470)
T ss_dssp CEEEEEETTTCHHHHHHTTCC----S--SCEEEEEEESSC
T ss_pred EEEEEEECCCCHHHHHHcCCC----c--cCeEEEEECCCc
Confidence 444444 46678999999997 3 699999976653
No 273
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=31.84 E-value=33 Score=18.59 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=12.5
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
..+++|.+|+|++.-
T Consensus 15 ~i~~~d~~g~i~~~N 29 (114)
T 3luq_A 15 ALAMFDREMRYLAVS 29 (114)
T ss_dssp EEEEEETTCBEEEEC
T ss_pred eEEEEcCCcEEEEEC
Confidence 568899999998764
No 274
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=31.46 E-value=25 Score=15.81 Aligned_cols=16 Identities=25% Similarity=0.038 Sum_probs=13.0
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
-++.|-|.+|+++...
T Consensus 5 ~ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADL 20 (26)
T ss_pred CCCEEEeCCCCEeeec
Confidence 4588999999988754
No 275
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=31.03 E-value=41 Score=20.38 Aligned_cols=42 Identities=24% Similarity=0.324 Sum_probs=26.7
Q ss_pred eEEEECCCCCEEEEEeccC-CCCCCHHHHHHHHHhhhhhhhcC
Q psy13875 54 GLFIIDTKGVLRQITVNDL-PVGRSVEEVLRLVKAFQFVDKHG 95 (105)
Q Consensus 54 atfiID~~G~V~~~~~~~~-~~~~~~~eil~~l~~l~~~~~~~ 95 (105)
+.++.+++|.+.....+.. ....+..|+...+.+|+.+.+.+
T Consensus 22 G~v~~~~~g~~~~~~~~~~~~~tn~~aEl~A~~~aL~~a~~~~ 64 (140)
T 3u3g_D 22 GVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFG 64 (140)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECHHHHHHHHHHHHHHHHGGGG
T ss_pred EEEEEeCCCCEEEEEEeeCCCCchHHHHHHHHHHHHHHHHHcC
Confidence 4577788888764443322 12335788888888887766544
No 276
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=30.91 E-value=45 Score=21.46 Aligned_cols=41 Identities=24% Similarity=0.363 Sum_probs=22.2
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
..++.+|+. | .| ||+| +|+......|. .+.+++.+.|+.+.
T Consensus 143 ~~a~~~gv~----g--tP-t~~v--ng~~~~~~~G~----~~~e~l~~~i~~l~ 183 (192)
T 3h93_A 143 KLAMAYQVT----G--VP-TMVV--NGKYRFDIGSA----GGPEETLKLADYLI 183 (192)
T ss_dssp HHHHHHTCC----S--SS-EEEE--TTTEEEEHHHH----TSHHHHHHHHHHHH
T ss_pred HHHHHhCCC----C--CC-eEEE--CCEEEeccccc----CCHHHHHHHHHHHH
Confidence 344555554 4 46 5666 56654322232 25777777776654
No 277
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=30.87 E-value=29 Score=23.41 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=13.6
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
=+.+++|++|+|+++-
T Consensus 33 ~~vii~D~~g~I~~~N 48 (233)
T 3vol_A 33 ANVMIADNDLNIIYMN 48 (233)
T ss_dssp SEEEEEETTSBEEEEC
T ss_pred CcEEEECCCCcEEEec
Confidence 4689999999999864
No 278
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=30.43 E-value=35 Score=18.98 Aligned_cols=15 Identities=27% Similarity=0.377 Sum_probs=12.4
Q ss_pred eEEEECCCCCEEEEE
Q psy13875 54 GLFIIDTKGVLRQIT 68 (105)
Q Consensus 54 atfiID~~G~V~~~~ 68 (105)
..+++|.+|+|++.-
T Consensus 11 ~i~~~d~~g~i~~~N 25 (126)
T 3mjq_A 11 MILIINREGRLLYAN 25 (126)
T ss_dssp EEEEEETTSBEEEEC
T ss_pred eEEEEeCCCcEEEEc
Confidence 568999999998764
No 279
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=30.14 E-value=60 Score=19.39 Aligned_cols=22 Identities=18% Similarity=0.072 Sum_probs=16.7
Q ss_pred ccceeEEEECCCCCEEEEEeccC
Q psy13875 50 IPLRGLFIIDTKGVLRQITVNDL 72 (105)
Q Consensus 50 ~~~ratfiID~~G~V~~~~~~~~ 72 (105)
+.....||+|- |..+|+|.|..
T Consensus 26 Lns~d~FILd~-g~~iyvW~G~~ 47 (104)
T 1kcq_A 26 FNNGDCFILDL-GNNIHQWCGSN 47 (104)
T ss_dssp CCTTSEEEEEC-SSEEEEEECTT
T ss_pred cCCCCeEEEeC-CCEEEEEeCCC
Confidence 34678999985 55789999864
No 280
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=29.81 E-value=54 Score=21.10 Aligned_cols=18 Identities=28% Similarity=0.314 Sum_probs=15.0
Q ss_pred ceeEEEECCCCCEEEEEe
Q psy13875 52 LRGLFIIDTKGVLRQITV 69 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~ 69 (105)
.+.++|+|++|.|+...-
T Consensus 26 v~~~~lvd~dG~vIa~~~ 43 (136)
T 3t12_B 26 ARYALLIDRKGFVLAHKE 43 (136)
T ss_dssp CSEEEEEETTC-CCEEEE
T ss_pred CeEEEEEcCCCCEEEEec
Confidence 599999999999998774
No 281
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=29.24 E-value=39 Score=18.13 Aligned_cols=16 Identities=13% Similarity=0.360 Sum_probs=13.0
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
-..+++|.+|+|.+.-
T Consensus 18 ~~i~~~d~~~~i~~~N 33 (124)
T 3lyx_A 18 DAIVVTDLQGFIIDWN 33 (124)
T ss_dssp SEEEEEETTCBEEEEC
T ss_pred ceEEEECCCCcEeehh
Confidence 4678999999998764
No 282
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=28.68 E-value=43 Score=19.84 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=12.8
Q ss_pred eEEEECCCCCEEEEEe
Q psy13875 54 GLFIIDTKGVLRQITV 69 (105)
Q Consensus 54 atfiID~~G~V~~~~~ 69 (105)
..+++|.+|+|.|+--
T Consensus 11 ~i~v~d~~G~i~yvn~ 26 (111)
T 2vlg_A 11 IHAVLASNGRIIYISA 26 (111)
T ss_dssp EEEEECTTSBEEEECT
T ss_pred EEEEEcCCCeEEEECh
Confidence 5789999999987643
No 283
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=28.21 E-value=58 Score=19.74 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=15.2
Q ss_pred ceeEEEECCCCCEEEEEe
Q psy13875 52 LRGLFIIDTKGVLRQITV 69 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~ 69 (105)
.++.|+-||||.++-+..
T Consensus 115 ~~~~~f~DPDGn~iEi~~ 132 (149)
T 4gym_A 115 MYGRSFHDLDGHLWEVMW 132 (149)
T ss_dssp EEEEEEECTTCCEEEEEE
T ss_pred EEEEEEEcCCCCEEEEEE
Confidence 478999999999887754
No 284
>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0
Probab=28.20 E-value=88 Score=18.57 Aligned_cols=19 Identities=16% Similarity=0.076 Sum_probs=15.8
Q ss_pred ceeEEEECCCCCEEEEEec
Q psy13875 52 LRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~ 70 (105)
.|..++.||+|.++...-.
T Consensus 106 ~~~~~~~DPdG~~iel~~~ 124 (134)
T 3fcd_A 106 QREFQVRMPDGDWLNFTAP 124 (134)
T ss_dssp EEEEEEECTTSCEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEEc
Confidence 4889999999998877654
No 285
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=27.91 E-value=1.1e+02 Score=20.65 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=32.2
Q ss_pred CCceEEe-eCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHH--HHHHHHhhh
Q psy13875 25 LKYPLLA-DFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEE--VLRLVKAFQ 89 (105)
Q Consensus 25 l~fplls-D~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~e--il~~l~~l~ 89 (105)
+.|-++. +..+.+.+.||+... +-..|+..|+|.+|. .|..-+ .-+.+. |.++++.+.
T Consensus 169 ~~F~~~d~~~~~~~~~~fgl~~~--~~~~P~v~i~~~~~~-ky~~~~----~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 169 LNFAVASRKTFSHELSDFGLEST--AGEIPVVAIRTAKGE-KFVMQE----EFSRDGKALERFLQDYF 229 (252)
T ss_dssp CEEEEEETTTTHHHHGGGTCCCC--SCSSCEEEEECTTSC-EEECCS----CCCTTSHHHHHHHHHHH
T ss_pred EEEEEEchHHHHHHHHHcCCCCc--cCCCCEEEEEeCcCc-EecCCc----ccCcchHHHHHHHHHHH
Confidence 6776652 223567888888310 113699999988765 444322 222333 666665543
No 286
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=27.89 E-value=20 Score=21.02 Aligned_cols=24 Identities=21% Similarity=0.112 Sum_probs=16.6
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEE
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~ 68 (105)
.+++.||+. ..|++| + +|+++..+
T Consensus 64 ~l~~~~~v~------~~Pt~~-~--~g~~v~~~ 87 (116)
T 2e7p_A 64 ALAHWTGRG------TVPNVF-I--GGKQIGGC 87 (116)
T ss_dssp HHHHHHSCC------SSCEEE-E--TTEEEECH
T ss_pred HHHHHhCCC------CcCEEE-E--CCEEECCh
Confidence 588899986 368884 4 68766544
No 287
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=27.82 E-value=65 Score=23.29 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=24.8
Q ss_pred cchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHH
Q psy13875 34 KKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVK 86 (105)
Q Consensus 34 ~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~ 86 (105)
+.+++++||+. | .|+ +++ +|+. +.| .++.+++.+.+.
T Consensus 240 ~~~la~~~gI~----~--vPT-~~i--~G~~---~~G----~~~~~~L~~~l~ 276 (291)
T 3kp9_A 240 QAQECTEAGIT----S--YPT-WII--NGRT---YTG----VRSLEALAVASG 276 (291)
T ss_dssp CCHHHHTTTCC----S--TTE-EEE--TTEE---EES----CCCHHHHHHHTC
T ss_pred HHHHHHHcCCc----c--cCe-EEE--CCEE---ecC----CCCHHHHHHHHC
Confidence 67999999987 4 588 445 6752 444 346777776653
No 288
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=26.90 E-value=43 Score=23.34 Aligned_cols=39 Identities=18% Similarity=0.049 Sum_probs=29.5
Q ss_pred cceeEEEECCCCCEEEEEecc---CC-CCCCHHHHHHHHHhhh
Q psy13875 51 PLRGLFIIDTKGVLRQITVND---LP-VGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 51 ~~ratfiID~~G~V~~~~~~~---~~-~~~~~~eil~~l~~l~ 89 (105)
..|..+++|++|.+...++|- ++ ...+.++.++..+++-
T Consensus 105 L~P~NL~f~~~~~p~i~~RGik~~l~P~~~~ee~fL~qyKAli 147 (215)
T 4ann_A 105 LAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALV 147 (215)
T ss_dssp CSGGGEEECTTSCEEESCCEETTTBSCCCCCHHHHHHHHHHHH
T ss_pred EecceEEEcCCCCEEEEEccCccCCCCCCCCHHHHHHHHHHHH
Confidence 368889999999999888863 22 2447788888877763
No 289
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=26.88 E-value=31 Score=24.47 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=38.9
Q ss_pred EEeeCcchHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhhhhh-cCCcccCCC
Q psy13875 29 LLADFKKEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQFVDK-HGEGSKRVP 102 (105)
Q Consensus 29 llsD~~~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~~~-~~~~~~~~~ 102 (105)
++.|+.+-++ .||+..++ ++ ..=|+|..-.++|..+ +..+...-.--.+.|.+|-..+. .|.+-+..|
T Consensus 154 lVrePR~vL~-EfGv~lP~-~v---~VrV~Dstae~rYlVL-P~RP~gte~lseeqLa~lVTrdsmIGv~l~~~p 222 (226)
T 3qyh_A 154 MVSDPRGVLA-EFGLVIPA-NK---EIRVWDTTAELRYMVL-PERPAGTEAYSEEQLAELVTRDSMIGTGLPTQP 222 (226)
T ss_dssp HTTCHHHHHH-HTTCCCCT-TS---EEEEEECCSSCEEEEE-CCCCSSCTTCCHHHHHTTCCHHHHHTSSCCCCC
T ss_pred HHHHHHHHHH-HhCCCCCC-Ce---EEEEEeCCCCeEEEEe-cCCCCCCCCCCHHHHHHHhccccceeeccCCCC
Confidence 3445555444 58887653 33 3338999999999888 44332111112344566655444 476665554
No 290
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.51 E-value=73 Score=19.85 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=17.3
Q ss_pred eeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhh
Q psy13875 53 RGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 53 ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~ 89 (105)
....|+++.|...++.+ .+.++..+++++|.
T Consensus 53 ~~v~i~~~~Gf~aFVef------~~~~~A~~A~~~Ln 83 (124)
T 2e5i_A 53 QRIVIFKRNGIQAMVEF------ESVLCAQKAKAALN 83 (124)
T ss_dssp EEEEEEESSSEEEEEEE------SSHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCEEEEEE------CCHHHHHHHHHHhC
Confidence 34445666664344443 25677777777664
No 291
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=25.23 E-value=42 Score=21.26 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=13.2
Q ss_pred eEEEECCCCCEEEEEe
Q psy13875 54 GLFIIDTKGVLRQITV 69 (105)
Q Consensus 54 atfiID~~G~V~~~~~ 69 (105)
+.+++|++|+|.+.-.
T Consensus 29 Gii~lD~~g~I~~~N~ 44 (125)
T 1nwz_A 29 GAIQLDGDGNILQYNA 44 (125)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEECCCCEEEEEHH
Confidence 6789999999987543
No 292
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=24.53 E-value=70 Score=18.89 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.2
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
+..++.||+|..+.++.
T Consensus 114 ~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 78899999999877653
No 293
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=24.31 E-value=72 Score=19.70 Aligned_cols=38 Identities=5% Similarity=0.032 Sum_probs=25.2
Q ss_pred ceeEEEECCCC---CEEEEEeccCCCCCCHHHHHHHHHhhhhhhhcCCc
Q psy13875 52 LRGLFIIDTKG---VLRQITVNDLPVGRSVEEVLRLVKAFQFVDKHGEG 97 (105)
Q Consensus 52 ~ratfiID~~G---~V~~~~~~~~~~~~~~~eil~~l~~l~~~~~~~~~ 97 (105)
.+...|+|.+| +++-+. +..++++++..+......+..
T Consensus 114 ~~~lpVvd~~g~~~~~vGii--------t~~dil~~l~~~~~~~~~~~~ 154 (159)
T 3fv6_A 114 IDALPVIKDTDKGFEVIGRV--------TKTNMTKILVSLSENEILLQH 154 (159)
T ss_dssp CSEEEEEEECSSSEEEEEEE--------EHHHHHHHHHHHHTTCCC---
T ss_pred CcEEEEEeCCCcceeEEEEE--------EHHHHHHHHHHHhhcchhhhh
Confidence 57788999888 776554 467788888777655444443
No 294
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=24.24 E-value=74 Score=18.06 Aligned_cols=16 Identities=19% Similarity=0.387 Sum_probs=12.9
Q ss_pred ceeEEEECCCCCEEEE
Q psy13875 52 LRGLFIIDTKGVLRQI 67 (105)
Q Consensus 52 ~ratfiID~~G~V~~~ 67 (105)
.+..|+.||+|.+.-.
T Consensus 109 ~~~~~~~DPdG~~iel 124 (126)
T 2p25_A 109 KKMTFFFDPDGLPLEL 124 (126)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred cEEEEEECCCCCEEEe
Confidence 4778899999988754
No 295
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=24.17 E-value=83 Score=19.53 Aligned_cols=59 Identities=10% Similarity=0.048 Sum_probs=34.0
Q ss_pred HHHHHHhhhcCCCCCCCCCceEEeeCc--------chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHH
Q psy13875 8 DEVWLEDVKQGDGGLGDLKYPLLADFK--------KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVE 79 (105)
Q Consensus 8 h~~w~~~~~~~~~~~~~l~fpllsD~~--------~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~ 79 (105)
--.|.++ +|+.--.|-|-+++. .++.+.+|+. ..|.++| ||+|+..-.+ ++.+
T Consensus 35 ~~~~lk~-----~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~------~LP~~~V---DGevv~~G~y-----Pt~e 95 (106)
T 3ktb_A 35 VIESLKK-----QGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGAD------ALPITLV---DGEIAVSQTY-----PTTK 95 (106)
T ss_dssp HHHHHHH-----TTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGG------GCSEEEE---TTEEEECSSC-----CCHH
T ss_pred HHHHHHH-----CCCEEEEEccccChHHHhcCHHHHHHHHHcCcc------cCCEEEE---CCEEEEeccC-----CCHH
Confidence 3567765 344333466666664 2334455554 4687765 7888754332 3678
Q ss_pred HHHHHH
Q psy13875 80 EVLRLV 85 (105)
Q Consensus 80 eil~~l 85 (105)
|+.+++
T Consensus 96 El~~~l 101 (106)
T 3ktb_A 96 QMSEWT 101 (106)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877765
No 296
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=24.14 E-value=49 Score=21.86 Aligned_cols=16 Identities=13% Similarity=-0.041 Sum_probs=13.2
Q ss_pred ceeEEEECCCCCEEEE
Q psy13875 52 LRGLFIIDTKGVLRQI 67 (105)
Q Consensus 52 ~ratfiID~~G~V~~~ 67 (105)
.-..||+|++|+|+..
T Consensus 163 ~g~~~l~d~~G~ii~~ 178 (260)
T 3by9_A 163 SSYFVATDDHQVVFMS 178 (260)
T ss_dssp SCEEEEECTTCBEEEE
T ss_pred CCcEEEECCCCeEEEc
Confidence 3468999999999875
No 297
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=23.78 E-value=33 Score=22.41 Aligned_cols=15 Identities=13% Similarity=0.321 Sum_probs=12.7
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
+-..|+|+++|+|..
T Consensus 62 igyhflI~~dG~I~e 76 (163)
T 1sk4_A 62 IGYHFLVGQDGGVYE 76 (163)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 578999999999854
No 298
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=23.74 E-value=1e+02 Score=18.24 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=15.7
Q ss_pred ceeEEEECCCCCEEEEEec
Q psy13875 52 LRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~ 70 (105)
.+..|+.||+|.+.-+...
T Consensus 110 ~~~~~~~DPdG~~iel~~~ 128 (138)
T 2a4x_A 110 QRYAIVKDPDGNVVDLFAP 128 (138)
T ss_dssp EEEEEEECTTCCEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeC
Confidence 4788999999998877654
No 299
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=23.51 E-value=40 Score=21.72 Aligned_cols=15 Identities=20% Similarity=0.275 Sum_probs=12.3
Q ss_pred eeEEEECCCCCEEEE
Q psy13875 53 RGLFIIDTKGVLRQI 67 (105)
Q Consensus 53 ratfiID~~G~V~~~ 67 (105)
-.+||+|.+|+|+..
T Consensus 160 g~~~l~d~~G~ii~~ 174 (240)
T 3c8c_A 160 GYVFIVSEDGTTIAH 174 (240)
T ss_dssp EEEEEEETTSBEEEC
T ss_pred eEEEEEcCCCcEEEe
Confidence 358999999999863
No 300
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=23.51 E-value=68 Score=21.88 Aligned_cols=45 Identities=9% Similarity=0.110 Sum_probs=26.5
Q ss_pred hHHhh-hCCccccCCccceeEEEECCCCCEEEEEeccCC----CCCCHHHHHHHHHhhh
Q psy13875 36 EIATS-YGVLIESAGIPLRGLFIIDTKGVLRQITVNDLP----VGRSVEEVLRLVKAFQ 89 (105)
Q Consensus 36 ~vak~-ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~----~~~~~~eil~~l~~l~ 89 (105)
..+++ +|+. | .|+.||.+.+|+.. .|..+ -..+.+++.++|+++.
T Consensus 161 ~~a~~~~GV~----G--tPtfvv~~~nG~~~---~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 161 SLAINKLGIT----A--VPIFFIKLNDDKSY---IEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHHHCCC----S--SCEEEEEECCTTCC---CCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCC----c--CCEEEEEcCCCEEe---eCCCCcccccccCHHHHHHHHHHHH
Confidence 34455 6665 4 58888877788732 22211 1234788888777653
No 301
>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A
Probab=23.39 E-value=75 Score=18.49 Aligned_cols=16 Identities=25% Similarity=0.299 Sum_probs=13.5
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
+..++.||+|.+....
T Consensus 104 ~~~~~~DPdG~~iel~ 119 (122)
T 1qto_A 104 REFAVRDPAGNCVHFT 119 (122)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cEEEEECCCCCEEEEe
Confidence 7789999999987654
No 302
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=23.37 E-value=48 Score=21.22 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.2
Q ss_pred eEEEECCCCCEEEEEe
Q psy13875 54 GLFIIDTKGVLRQITV 69 (105)
Q Consensus 54 atfiID~~G~V~~~~~ 69 (105)
..+++|++|+|.+.-.
T Consensus 34 GiivlD~dg~I~~~N~ 49 (129)
T 1mzu_A 34 GAIQVDGSGVIHRYNR 49 (129)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred eEEEECCCCeEEEEHH
Confidence 6789999999987543
No 303
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=23.23 E-value=53 Score=20.55 Aligned_cols=16 Identities=13% Similarity=0.212 Sum_probs=13.2
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
-+.+++|.+|+|.+.-
T Consensus 91 ~gvi~~D~~g~I~~~N 106 (190)
T 2jhe_A 91 EPVLSVDMKSKVDMAN 106 (190)
T ss_dssp SCEEEECTTCBEEEEC
T ss_pred CcEEEEcCCCCEEEEc
Confidence 3578999999999864
No 304
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=23.17 E-value=47 Score=21.60 Aligned_cols=17 Identities=6% Similarity=0.040 Sum_probs=13.5
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
-..||+|.+|+|++.--
T Consensus 163 g~~~l~d~~G~ii~~~~ 179 (217)
T 4dah_A 163 VYIEVVNQDGKMIFASG 179 (217)
T ss_dssp SCEEEEETTSCEEEEES
T ss_pred cEEEEEcCCCCEEEeCC
Confidence 36899999998887543
No 305
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=22.80 E-value=73 Score=19.57 Aligned_cols=17 Identities=29% Similarity=0.253 Sum_probs=13.7
Q ss_pred ceeEEEECCCCCEEEEE
Q psy13875 52 LRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~ 68 (105)
-+..|+-||+|.++-..
T Consensus 133 g~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 133 VVTAILDDTCGNLIQLM 149 (155)
T ss_dssp CEEEEEECSSSCEEEEE
T ss_pred eEEEEEECCCCCEEEEE
Confidence 37789999999987654
No 306
>2zyz_A Putative uncharacterized protein PAE0789; crenarchaea, heterotetramer, RNA PROC endonuclease, hydrolase, tRNA processing; 1.70A {Pyrobaculum aerophilum}
Probab=22.73 E-value=83 Score=19.76 Aligned_cols=25 Identities=12% Similarity=0.305 Sum_probs=17.4
Q ss_pred eeEE-EECCCCCEEEEEeccCCCCCC
Q psy13875 53 RGLF-IIDTKGVLRQITVNDLPVGRS 77 (105)
Q Consensus 53 ratf-iID~~G~V~~~~~~~~~~~~~ 77 (105)
+..| ++|.+|.|.|..+.-....+|
T Consensus 85 ~~VlAiVd~dg~ItYy~v~~~~~~~~ 110 (116)
T 2zyz_A 85 PVVLALVSNDGTVTYYYVRKIRLPRN 110 (116)
T ss_dssp CEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred EEEEEEEcCCCCEEEEEEEEcccCcc
Confidence 4444 368999999998876555544
No 307
>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A
Probab=22.59 E-value=82 Score=18.39 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=14.1
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
+..++.||+|.+....-
T Consensus 104 ~~~~~~DPdG~~iel~~ 120 (124)
T 1xrk_A 104 REFALRDPAGNCVHFVA 120 (124)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred CEEEEECCCCCEEEEEE
Confidence 78899999999876653
No 308
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=22.39 E-value=1.3e+02 Score=17.83 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=21.3
Q ss_pred ceeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhh
Q psy13875 52 LRGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQF 90 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~ 90 (105)
.+...|+|.+|+++-+. +..++++.+.....
T Consensus 116 ~~~l~Vvd~~g~~~Gii--------t~~dil~~~~~~~~ 146 (152)
T 4gqw_A 116 YRRLPVVDSDGKLVGII--------TRGNVVRAALQIKR 146 (152)
T ss_dssp CCEEEEECTTSBEEEEE--------EHHHHHHHHHC---
T ss_pred CCEEEEECCCCcEEEEE--------EHHHHHHHHHhccc
Confidence 46788999999887655 46778887766543
No 309
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=22.33 E-value=1.9e+02 Score=19.75 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=22.3
Q ss_pred eEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHh
Q psy13875 54 GLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKA 87 (105)
Q Consensus 54 atfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~ 87 (105)
...++|.+|+|+.....+.......+++++.|.+
T Consensus 14 ~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~i~~ 47 (289)
T 2aa4_A 14 AAALIGADGQIRDRRELPTPASQTPEALRDALSA 47 (289)
T ss_dssp EEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEecCCCCCCHHHHHHHHHH
Confidence 3456799999988776554333347777766654
No 310
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=21.98 E-value=48 Score=21.15 Aligned_cols=15 Identities=27% Similarity=0.430 Sum_probs=12.4
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
.-..|+||++|+|..
T Consensus 40 isyHflI~~dG~I~q 54 (146)
T 1lba_A 40 VGYHFIIKRDGTVEA 54 (146)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 568899999999743
No 311
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=21.83 E-value=66 Score=18.20 Aligned_cols=16 Identities=6% Similarity=0.208 Sum_probs=12.7
Q ss_pred ceeEEEECCCCCEEEE
Q psy13875 52 LRGLFIIDTKGVLRQI 67 (105)
Q Consensus 52 ~ratfiID~~G~V~~~ 67 (105)
.+..|+.||+|.+.-.
T Consensus 96 ~~~~~~~DPdG~~iel 111 (113)
T 1xqa_A 96 AYTFYVEAPGGFTIEV 111 (113)
T ss_dssp CEEEEEEETTTEEEEE
T ss_pred cEEEEEECCCCcEEEE
Confidence 4678999999987654
No 312
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=21.60 E-value=1.1e+02 Score=18.17 Aligned_cols=19 Identities=26% Similarity=0.600 Sum_probs=15.4
Q ss_pred ceeEEEECCCCCEEEEEec
Q psy13875 52 LRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~ 70 (105)
.+..|+.|++|.++-+...
T Consensus 133 g~~~~~~DPdG~~iel~~~ 151 (156)
T 3kol_A 133 GRGVYFYDPDGFMIEIRCD 151 (156)
T ss_dssp CEEEEEECTTSCEEEEEEC
T ss_pred ccEEEEECCCCCEEEEEec
Confidence 3688999999998877654
No 313
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=21.56 E-value=75 Score=17.64 Aligned_cols=16 Identities=6% Similarity=-0.307 Sum_probs=12.8
Q ss_pred eeEEEECCCCCEEEEE
Q psy13875 53 RGLFIIDTKGVLRQIT 68 (105)
Q Consensus 53 ratfiID~~G~V~~~~ 68 (105)
-..+++|.+|+|.++-
T Consensus 10 ~~i~~~d~~g~i~~~n 25 (117)
T 3f1p_A 10 TFLSEHSMDMKFTYCD 25 (117)
T ss_dssp EEEEEECTTCBEEEEC
T ss_pred cEEEEECCCceEEEEC
Confidence 4567889999998764
No 314
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=21.52 E-value=16 Score=20.28 Aligned_cols=14 Identities=29% Similarity=0.641 Sum_probs=11.4
Q ss_pred eEEEECCCCCEEEE
Q psy13875 54 GLFIIDTKGVLRQI 67 (105)
Q Consensus 54 atfiID~~G~V~~~ 67 (105)
..+++|.+|+|++.
T Consensus 27 ~i~~~d~~g~i~~~ 40 (118)
T 2w0n_A 27 GVVAVDDRGEVTLI 40 (118)
T ss_dssp CCEEEBTTTBCCCB
T ss_pred cEEEECCCCcEeeh
Confidence 46899999998764
No 315
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=21.52 E-value=96 Score=18.66 Aligned_cols=18 Identities=28% Similarity=0.442 Sum_probs=15.0
Q ss_pred eeEEEECCCCCEEEEEec
Q psy13875 53 RGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 53 ratfiID~~G~V~~~~~~ 70 (105)
+..|+.||+|.++-+...
T Consensus 126 ~~~~~~DPdG~~iEl~~~ 143 (152)
T 3huh_A 126 MSIYIRDPDGNLIEISQY 143 (152)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEec
Confidence 788999999998877653
No 316
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=21.51 E-value=39 Score=22.31 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=11.9
Q ss_pred ceeEEEECCCCCEE
Q psy13875 52 LRGLFIIDTKGVLR 65 (105)
Q Consensus 52 ~ratfiID~~G~V~ 65 (105)
+--.|+|++||+|-
T Consensus 63 IGYhflI~~dG~Iy 76 (167)
T 2f2l_A 63 IAYNFLIGGDGNVY 76 (167)
T ss_dssp CSCSEEECTTSCEE
T ss_pred cCCcEEEcCCCEEE
Confidence 56789999999974
No 317
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=21.34 E-value=91 Score=17.76 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=13.2
Q ss_pred ceeEEEECCCCCEEEE
Q psy13875 52 LRGLFIIDTKGVLRQI 67 (105)
Q Consensus 52 ~ratfiID~~G~V~~~ 67 (105)
.+..|+.||+|.+.-.
T Consensus 117 ~~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 117 KKMAFFFDPDGLPLEL 132 (134)
T ss_dssp CEEEEEECTTCCEEEE
T ss_pred eEEEEEECCCCCEEEE
Confidence 5788999999987654
No 318
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=21.22 E-value=1.1e+02 Score=19.58 Aligned_cols=12 Identities=17% Similarity=0.326 Sum_probs=7.1
Q ss_pred HHHHHHHHhhhh
Q psy13875 79 EEVLRLVKAFQF 90 (105)
Q Consensus 79 ~eil~~l~~l~~ 90 (105)
+++++.|+.|..
T Consensus 173 e~~~~~i~~L~~ 184 (195)
T 3hd5_A 173 AGALKVVDQLIV 184 (195)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 556666666543
No 319
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=21.22 E-value=88 Score=17.84 Aligned_cols=16 Identities=19% Similarity=0.268 Sum_probs=13.2
Q ss_pred ceeEEEECCCCCEEEE
Q psy13875 52 LRGLFIIDTKGVLRQI 67 (105)
Q Consensus 52 ~ratfiID~~G~V~~~ 67 (105)
.+..|+.||+|.+.-.
T Consensus 110 ~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 110 YYESVVLDPEGNRIEI 125 (127)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 4789999999987654
No 320
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=21.20 E-value=90 Score=17.72 Aligned_cols=17 Identities=35% Similarity=0.493 Sum_probs=13.9
Q ss_pred ceeEEEECCCCCEEEEE
Q psy13875 52 LRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~ 68 (105)
.+..++.||+|.+....
T Consensus 100 ~~~~~~~DPdG~~iel~ 116 (119)
T 2pjs_A 100 VQRLFLRDPFGKLINIL 116 (119)
T ss_dssp CEEEEEECTTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEE
Confidence 48899999999987654
No 321
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=21.15 E-value=75 Score=17.83 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=13.4
Q ss_pred ceeEEEECCCCCEEEEE
Q psy13875 52 LRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~ 68 (105)
.-..+++|.+|+|.++-
T Consensus 12 ~d~i~~~d~~g~i~~~n 28 (121)
T 3f1p_B 12 TRFISRHNIEGIFTFVD 28 (121)
T ss_dssp CEEEEEECTTSBEEEEC
T ss_pred CceEEEECCCceEEEEC
Confidence 34678899999998864
No 322
>3lic_A Sensor protein; PDC fold, ATP-binding, kinase, nucleotide-binding, phosphopr transferase, transmembrane; 2.30A {Shewanella oneidensis}
Probab=21.09 E-value=55 Score=21.87 Aligned_cols=13 Identities=31% Similarity=0.483 Sum_probs=11.6
Q ss_pred eEEEECCCCCEEE
Q psy13875 54 GLFIIDTKGVLRQ 66 (105)
Q Consensus 54 atfiID~~G~V~~ 66 (105)
.+||+|.+|+|+.
T Consensus 182 ~~~l~d~~G~ii~ 194 (274)
T 3lic_A 182 RLVVLDDQGRLIF 194 (274)
T ss_dssp GEEEECTTSCEEE
T ss_pred eEEEECCCCCEEE
Confidence 5899999999986
No 323
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=21.07 E-value=41 Score=22.15 Aligned_cols=15 Identities=13% Similarity=0.317 Sum_probs=12.7
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
+-..|+|+++|+|..
T Consensus 65 igyhflI~~dG~I~~ 79 (169)
T 2rkq_A 65 IGYHYLIGGNGKVYE 79 (169)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCCcEEECCCCEEEE
Confidence 578999999999854
No 324
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=20.99 E-value=70 Score=17.10 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.4
Q ss_pred eEEEECC---CCCEEEEE
Q psy13875 54 GLFIIDT---KGVLRQIT 68 (105)
Q Consensus 54 atfiID~---~G~V~~~~ 68 (105)
..+++|. +|+|.+.-
T Consensus 9 ~i~~~d~~~~~g~i~~~N 26 (115)
T 4eet_B 9 NFVITDPRLPDNPIIFAS 26 (115)
T ss_dssp SEEEECTTSTTCCEEEEC
T ss_pred cEEEEcCCCCCCcEEEEc
Confidence 5689999 99998764
No 325
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=20.99 E-value=82 Score=19.71 Aligned_cols=60 Identities=20% Similarity=0.226 Sum_probs=34.9
Q ss_pred HHHHHHhhhcCCCCCCCCCceEEeeCc--------chHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCCCCHH
Q psy13875 8 DEVWLEDVKQGDGGLGDLKYPLLADFK--------KEIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVGRSVE 79 (105)
Q Consensus 8 h~~w~~~~~~~~~~~~~l~fpllsD~~--------~~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~~~~~ 79 (105)
--.|.++ +|+.--.|-|-+++. .++.+.+|+. ..|.++| ||+|+..-.+ ++.+
T Consensus 32 ~~~~lk~-----~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~------~LP~~~V---DGevv~~G~y-----Pt~e 92 (110)
T 3kgk_A 32 DVQWLKQ-----SGVQIERFNLAQQPMSFVQNEKVKAFIEASGAE------GLPLLLL---DGETVMAGRY-----PKRA 92 (110)
T ss_dssp HHHHHHH-----HTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGG------GCCEEEE---TTEEEEESSC-----CCHH
T ss_pred HHHHHHH-----CCCeEEEEccccChHHHhcCHHHHHHHHHcCcc------cCCEEEE---CCEEEEeccC-----CCHH
Confidence 3567766 233222455656663 2444556654 4687765 7888765433 3678
Q ss_pred HHHHHHH
Q psy13875 80 EVLRLVK 86 (105)
Q Consensus 80 eil~~l~ 86 (105)
|+.+++.
T Consensus 93 El~~~lg 99 (110)
T 3kgk_A 93 ELARWFG 99 (110)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 8877764
No 326
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=20.96 E-value=91 Score=18.36 Aligned_cols=17 Identities=12% Similarity=0.046 Sum_probs=14.3
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
+..|+.||+|.++-...
T Consensus 110 ~~~~~~DPdG~~iel~~ 126 (136)
T 2rk0_A 110 WILAFRDADNIALEAML 126 (136)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred eEEEEECCCCCEEEEEE
Confidence 77899999999887664
No 327
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=20.96 E-value=79 Score=20.47 Aligned_cols=16 Identities=6% Similarity=0.206 Sum_probs=13.1
Q ss_pred eEEEECCCCCEEEEEe
Q psy13875 54 GLFIIDTKGVLRQITV 69 (105)
Q Consensus 54 atfiID~~G~V~~~~~ 69 (105)
....||.+|+|+.+..
T Consensus 85 DiiFid~dg~Vv~i~~ 100 (140)
T 3m7a_A 85 DIIFVGLDRRVMNIAA 100 (140)
T ss_dssp EEEEECTTSBEEEEEE
T ss_pred EEEEECCCCeEEEEEc
Confidence 4567899999999975
No 328
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=20.83 E-value=91 Score=18.01 Aligned_cols=17 Identities=18% Similarity=0.159 Sum_probs=13.9
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
+..|+.||+|.+.....
T Consensus 109 ~~~~~~DPdG~~iel~~ 125 (135)
T 1f9z_A 109 VIAFVEDPDGYKIELIE 125 (135)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEe
Confidence 56789999999887664
No 329
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=20.73 E-value=90 Score=18.58 Aligned_cols=18 Identities=11% Similarity=0.117 Sum_probs=15.1
Q ss_pred ceeEEEECCCCCEEEEEe
Q psy13875 52 LRGLFIIDTKGVLRQITV 69 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~ 69 (105)
.+..|+.||+|.+.-...
T Consensus 114 ~~~~~~~DPdG~~iel~~ 131 (141)
T 2rbb_A 114 WYQAVLLDPERNVFRINN 131 (141)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEE
Confidence 588999999999887664
No 330
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=20.69 E-value=92 Score=18.16 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=15.0
Q ss_pred ceeEEEECCCCCEEEEEe
Q psy13875 52 LRGLFIIDTKGVLRQITV 69 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~ 69 (105)
.+..++.||+|.+....-
T Consensus 101 ~~~~~~~DPdG~~iel~~ 118 (126)
T 1ecs_A 101 GTMAALVDPDGTLLRLIQ 118 (126)
T ss_dssp SEEEEEECTTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEec
Confidence 378899999999887664
No 331
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=20.56 E-value=1e+02 Score=19.96 Aligned_cols=13 Identities=0% Similarity=0.153 Sum_probs=9.5
Q ss_pred CHHHHHHHHHhhh
Q psy13875 77 SVEEVLRLVKAFQ 89 (105)
Q Consensus 77 ~~~eil~~l~~l~ 89 (105)
+.+++++.|+.|-
T Consensus 171 ~~e~~~~~i~~ll 183 (185)
T 3feu_A 171 DPKQIADTIRYLL 183 (185)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6788888877653
No 332
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=20.51 E-value=42 Score=22.26 Aligned_cols=15 Identities=20% Similarity=0.406 Sum_probs=12.7
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
+-..|+|+++|+|..
T Consensus 72 igyhflI~~dG~I~e 86 (175)
T 1yck_A 72 VGYNFLIGEDGLVYE 86 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 578999999999854
No 333
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.44 E-value=1.1e+02 Score=18.07 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=19.6
Q ss_pred eeEEEECCCCCEEEEEeccCCCCCCHHHHHHHHHhhhhhh
Q psy13875 53 RGLFIIDTKGVLRQITVNDLPVGRSVEEVLRLVKAFQFVD 92 (105)
Q Consensus 53 ratfiID~~G~V~~~~~~~~~~~~~~~eil~~l~~l~~~~ 92 (105)
+..|.|...+++.+... .+.++..+++++|+.+.
T Consensus 70 ~~~F~i~~~~r~~~l~a------~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 70 EGIFEIKTPSRVITLKA------ATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp GCEEEEECSSCCEEEEC------SSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcEEEEEC------CCHHHHHHHHHHHHHHH
Confidence 44666555555433221 26777778887777554
No 334
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=20.43 E-value=42 Score=22.29 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=12.7
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
+-..|+|+++|+|..
T Consensus 71 igyhflI~~dG~I~e 85 (180)
T 2xz4_A 71 IGYNFLVGGDGQIYV 85 (180)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 578999999999854
No 335
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=20.36 E-value=43 Score=22.20 Aligned_cols=15 Identities=13% Similarity=0.341 Sum_probs=12.8
Q ss_pred ceeEEEECCCCCEEE
Q psy13875 52 LRGLFIIDTKGVLRQ 66 (105)
Q Consensus 52 ~ratfiID~~G~V~~ 66 (105)
+-..|+|+++|+|..
T Consensus 68 igyhflI~~dG~I~e 82 (175)
T 2cb3_A 68 IAYNFLVGCDGNIYE 82 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 578999999999854
No 336
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=20.32 E-value=95 Score=17.93 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=13.9
Q ss_pred ceeEEEECCCCCEEEEE
Q psy13875 52 LRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~ 68 (105)
.+..|+.||+|.+....
T Consensus 106 ~~~~~~~DPdG~~iel~ 122 (126)
T 2qqz_A 106 VIRFYVSDPFGNRIEFM 122 (126)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred eeEEEEECCCCCEEEEE
Confidence 47889999999987655
No 337
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=20.25 E-value=1.3e+02 Score=17.43 Aligned_cols=19 Identities=16% Similarity=0.279 Sum_probs=15.7
Q ss_pred ceeEEEECCCCCEEEEEec
Q psy13875 52 LRGLFIIDTKGVLRQITVN 70 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~~~ 70 (105)
.+..|+.||+|.+......
T Consensus 104 ~~~~~~~DPdG~~iel~~~ 122 (133)
T 2p7o_A 104 GRSIYFYDFDNHLFELHAG 122 (133)
T ss_dssp CCEEEEECSSSCEEEEECS
T ss_pred eeEEEEECCCCCEEEEEcC
Confidence 4789999999999877653
No 338
>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Probab=20.21 E-value=2e+02 Score=21.26 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=30.4
Q ss_pred hHHhhhCCccccCCccceeEEEECCCCCEEEEEeccCCCC-CCHHHHHHHHHhh
Q psy13875 36 EIATSYGVLIESAGIPLRGLFIIDTKGVLRQITVNDLPVG-RSVEEVLRLVKAF 88 (105)
Q Consensus 36 ~vak~ygv~~~~~G~~~ratfiID~~G~V~~~~~~~~~~~-~~~~eil~~l~~l 88 (105)
++++.+|-..-+..+..++.+++|..|+|.+..-...... .+.-.++-++-.+
T Consensus 19 ~~~~~~~~~~l~~~~~a~~~il~d~tG~vL~~~n~d~~~~~AS~tKlmTa~~vl 72 (369)
T 1tvf_A 19 QAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTL 72 (369)
T ss_dssp HHHHHTTCTTCCGGGCCSEEEEEETTSBEEEEESTTCCBCCGGGHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccCCcEEEEEeCCCCEEEEECCCCeEccHHHHHHHHHHHHH
Confidence 6777776321111234579999998899998775432221 2555555544333
No 339
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=20.12 E-value=99 Score=17.72 Aligned_cols=17 Identities=18% Similarity=0.462 Sum_probs=14.2
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
+..|+.||+|.+.-+.-
T Consensus 113 ~~~~~~DPdG~~iel~~ 129 (133)
T 3ey7_A 113 TSFYFRDPDGNLIEVST 129 (133)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 78899999999877653
No 340
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=20.12 E-value=92 Score=19.12 Aligned_cols=17 Identities=12% Similarity=0.255 Sum_probs=14.4
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13875 53 RGLFIIDTKGVLRQITV 69 (105)
Q Consensus 53 ratfiID~~G~V~~~~~ 69 (105)
|..|+.||+|.+.-..-
T Consensus 101 ~~~~~~DPdG~~iel~~ 117 (144)
T 3r6a_A 101 RNMTVRHSDGSVIEYVE 117 (144)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEE
Confidence 67899999999887764
No 341
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=20.09 E-value=96 Score=18.68 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=13.8
Q ss_pred ceeEEEECCCCCEEEEE
Q psy13875 52 LRGLFIIDTKGVLRQIT 68 (105)
Q Consensus 52 ~ratfiID~~G~V~~~~ 68 (105)
.+..|+.||+|.++-..
T Consensus 123 ~~~~~~~DPdG~~iel~ 139 (141)
T 3ghj_A 123 AVSLYFADPNGHALEFT 139 (141)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 47899999999987654
No 342
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=20.00 E-value=45 Score=21.89 Aligned_cols=14 Identities=7% Similarity=0.062 Sum_probs=11.8
Q ss_pred ceeEEEECCCCCEE
Q psy13875 52 LRGLFIIDTKGVLR 65 (105)
Q Consensus 52 ~ratfiID~~G~V~ 65 (105)
+--.|+|++||+|-
T Consensus 70 IGYnFlI~~dG~Vy 83 (150)
T 2xz8_A 70 INYNFVAAGDENIY 83 (150)
T ss_dssp CSCSEEECTTSCEE
T ss_pred CCCcEEEcCCCeEE
Confidence 56789999999873
Done!