BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13876
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBH9|MCM7_BOVIN DNA replication licensing factor MCM7 OS=Bos taurus GN=MCM7 PE=2
SV=1
Length = 719
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%)
Query: 33 ILHGLFVCSSPGLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAAS 92
IL F GLLS+TY+EA RI +SK+ ED+ AG L+ EE+ ++ + FY KLAAS
Sbjct: 280 ILRTGFRQMVQGLLSETYLEAHRIVKMSKSEEDESGAGELTREELRQITEEDFYEKLAAS 339
Query: 93 LAPEIYGHEDVKKALLLLLVGGVDRS 118
+APEIYGHEDVKKALLLLLVGGVD+S
Sbjct: 340 IAPEIYGHEDVKKALLLLLVGGVDQS 365
>sp|P33993|MCM7_HUMAN DNA replication licensing factor MCM7 OS=Homo sapiens GN=MCM7 PE=1
SV=4
Length = 719
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 65/86 (75%)
Query: 33 ILHGLFVCSSPGLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAAS 92
IL F GLLS+TY+EA RI ++K+ +D+ AG L+ EE+ ++ + FY KLAAS
Sbjct: 280 ILRTGFRQVVQGLLSETYLEAHRIVKMNKSEDDESGAGELTREELRQIAEEDFYEKLAAS 339
Query: 93 LAPEIYGHEDVKKALLLLLVGGVDRS 118
+APEIYGHEDVKKALLLLLVGGVD+S
Sbjct: 340 IAPEIYGHEDVKKALLLLLVGGVDQS 365
>sp|Q61881|MCM7_MOUSE DNA replication licensing factor MCM7 OS=Mus musculus GN=Mcm7 PE=2
SV=1
Length = 719
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 64/86 (74%)
Query: 33 ILHGLFVCSSPGLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAAS 92
+L F + GLLS+TY+EA I ++K+ +D AG LS EE+ ++ + FY KLAAS
Sbjct: 280 VLRTGFQQMAQGLLSETYLEAHWIVKMTKSDDDVSGAGELSSEELKQIAEEDFYEKLAAS 339
Query: 93 LAPEIYGHEDVKKALLLLLVGGVDRS 118
+APEIYGHEDVKKALLLLLVGGVD+S
Sbjct: 340 IAPEIYGHEDVKKALLLLLVGGVDQS 365
>sp|Q6NX31|MCM7_XENTR DNA replication licensing factor mcm7 OS=Xenopus tropicalis GN=mcm7
PE=2 SV=1
Length = 720
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 44 GLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAASLAPEIYGHEDV 103
GLLS+TY+E+ R+ ++K +D+ LSEEE+ ++ + FY KLAAS+APEIYGHEDV
Sbjct: 290 GLLSETYLESHRLVKMNKTEDDELGTEELSEEELRQITEEDFYEKLAASIAPEIYGHEDV 349
Query: 104 KKALLLLLVGGVDRS 118
KKALLLLLVGGVD S
Sbjct: 350 KKALLLLLVGGVDNS 364
>sp|Q7ZXB1|MCM7B_XENLA DNA replication licensing factor mcm7-B OS=Xenopus laevis GN=mcm7-b
PE=2 SV=1
Length = 720
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 44 GLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAASLAPEIYGHEDV 103
GLLS+TY+E+ R+ ++K +D+ LSEEE+ ++ + FY KLAAS+APEIYGHEDV
Sbjct: 290 GLLSETYLESHRLVKMNKTEDDELGTEELSEEELRQITEEDFYEKLAASIAPEIYGHEDV 349
Query: 104 KKALLLLLVGGVDRS 118
KKALLLLLVGGVD S
Sbjct: 350 KKALLLLLVGGVDHS 364
>sp|Q91876|MCM7A_XENLA DNA replication licensing factor mcm7-A OS=Xenopus laevis GN=mcm7-a
PE=1 SV=2
Length = 720
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 44 GLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAASLAPEIYGHEDV 103
GLLS+TY+E R+ ++K+ +D+ LSEEE+ ++ + FY KLAAS+APEIYGHEDV
Sbjct: 290 GLLSETYLECHRLVKMNKSEDDELGTEELSEEELRQITEEDFYEKLAASIAPEIYGHEDV 349
Query: 104 KKALLLLLVGGVDRS 118
KKALLLLLVGGVD S
Sbjct: 350 KKALLLLLVGGVDNS 364
>sp|P43299|PROL_ARATH Protein PROLIFERA OS=Arabidopsis thaliana GN=PRL PE=1 SV=2
Length = 716
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 38 FVCSSPGLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGD-QFYSKLAASLAPE 96
F GL++DTY+EA + K E+ + EE++A L D Y+KL+ SLAPE
Sbjct: 279 FKALRAGLVADTYLEATSVTHFKKKYEEYEFQKD-EEEQIARLAEDGDIYNKLSRSLAPE 337
Query: 97 IYGHEDVKKALLLLLVGGVDR 117
IYGHED+KKALLLLLVG R
Sbjct: 338 IYGHEDIKKALLLLLVGAPHR 358
>sp|O75001|MCM7_SCHPO DNA replication licensing factor mcm7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm7 PE=1 SV=1
Length = 760
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 38 FVCSSPGLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELG-GDQFYSKLAASLAPE 96
F GLL+DTY+E + + K + + SE +AEL G Y KLA S+APE
Sbjct: 306 FRAMRAGLLTDTYLECHYVSQIIKNYTNIEKTPQ-SEAAIAELNQGGNVYEKLAKSIAPE 364
Query: 97 IYGHEDVKKA 106
IYGHEDVKKA
Sbjct: 365 IYGHEDVKKA 374
>sp|Q9XYU0|MCM7_DROME DNA replication licensing factor Mcm7 OS=Drosophila melanogaster
GN=Mcm7 PE=1 SV=1
Length = 720
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 44 GLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAASLAPEIYGH 100
GLLS+T+++A RI C++K E L+ EE+ EL D FY +LA SLAPEIYGH
Sbjct: 291 GLLSETFLQAHRIICINKNDEISDKDAELTPEELEELAQDDFYERLATSLAPEIYGH 347
>sp|P49731|MCM6_SCHPO DNA replication licensing factor mcm6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm6 PE=1 SV=2
Length = 892
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 64 EDDKPAGTLSEEEMAELGG----DQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
E D+ +LS+EE+ +L D YS+L SLAP +YGHE +KK +LL L+GGV +
Sbjct: 401 EQDEFLQSLSQEEIDDLRAMVHSDHIYSRLTNSLAPSVYGHEIIKKGILLQLMGGVHK 458
>sp|P53091|MCM6_YEAST DNA replication licensing factor MCM6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM6 PE=1 SV=2
Length = 1017
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 71 TLSEEEMAELG----GDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
+LS +E+ EL + Y KL S+AP ++GHE VKK +LL ++GGV +S
Sbjct: 507 SLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKS 558
>sp|P25205|MCM3_HUMAN DNA replication licensing factor MCM3 OS=Homo sapiens GN=MCM3 PE=1
SV=3
Length = 808
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 56 IQCLSKALEDDKPAGTLSEEEMAELG------GDQFYSKLAASLAPEIYGHEDVKKALLL 109
I C K + D + S E++A++ + +LA SLAP I+GH+ VKKA+L
Sbjct: 261 IACNVKQMSKDAQP-SFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPSIHGHDYVKKAILC 319
Query: 110 LLVGGVDR 117
LL+GGV+R
Sbjct: 320 LLLGGVER 327
>sp|Q5R8G6|MCM3_PONAB DNA replication licensing factor MCM3 OS=Pongo abelii GN=MCM3 PE=2
SV=1
Length = 808
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 56 IQCLSKALEDDKPAGTLSEEEMAELG------GDQFYSKLAASLAPEIYGHEDVKKALLL 109
I C K + D + S E++A++ + +LA SLAP I+GH+ VKKA+L
Sbjct: 261 IACNVKQMSKDAQP-SFSAEDIAKIKKFSKTRSKDIFDQLARSLAPSIHGHDYVKKAILC 319
Query: 110 LLVGGVDR 117
LL+GGV+R
Sbjct: 320 LLLGGVER 327
>sp|A4FUD9|MCM3_BOVIN DNA replication licensing factor MCM3 OS=Bos taurus GN=MCM3 PE=2
SV=1
Length = 808
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Query: 56 IQCLSKALEDD-KPAGTLSEEEMAELG------GDQFYSKLAASLAPEIYGHEDVKKALL 108
I C K + D +P + S E++A++ + +LA SLAP I+GH+ VKKA+L
Sbjct: 261 IACNVKQMSKDVQP--SFSAEDIAKIKKFSKTRSKDIFDQLARSLAPSIHGHDYVKKAIL 318
Query: 109 LLLVGGVDR 117
LL+GGV+R
Sbjct: 319 CLLLGGVER 327
>sp|Q5XK83|MCM4A_XENLA DNA replication licensing factor mcm4-A OS=Xenopus laevis GN=mcm4-a
PE=1 SV=1
Length = 858
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 63 LEDDKPAGTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+++D +EE +A L Y +LAA+LAP IY HED+KK +LL L GG +
Sbjct: 427 IDEDTEQKMFTEERVAVLKELAAKPDIYERLAAALAPSIYEHEDIKKGILLQLFGGTRK 485
>sp|P30664|MCM4B_XENLA DNA replication licensing factor mcm4-B OS=Xenopus laevis GN=mcm4-b
PE=1 SV=3
Length = 863
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 63 LEDDKPAGTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+++D +EE +A L Y +LAA+LAP IY HED+KK +LL L GG +
Sbjct: 432 IDEDTEQKLFTEERVAMLKELAAKPDIYERLAAALAPSIYEHEDIKKGILLQLFGGTRK 490
>sp|P25206|MCM3_MOUSE DNA replication licensing factor MCM3 OS=Mus musculus GN=Mcm3 PE=1
SV=2
Length = 812
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Query: 56 IQCLSKALEDD-KPAGTLSEEEMAELG------GDQFYSKLAASLAPEIYGHEDVKKALL 108
I C K + D +PA S +++A++ + +LA SLAP I+GH+ VKKA+L
Sbjct: 261 IACNVKQMSKDIQPA--FSADDIAKIKKFSKTRSKDVFEQLARSLAPSIHGHDYVKKAIL 318
Query: 109 LLLVGGVDR 117
LL+GGV+R
Sbjct: 319 CLLLGGVER 327
>sp|Q6GL41|MCM4_XENTR DNA replication licensing factor mcm4 OS=Xenopus tropicalis GN=mcm4
PE=2 SV=1
Length = 863
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 63 LEDDKPAGTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+++D +EE +A L Y +LA++LAP IY HED+KK +LL L GG +
Sbjct: 432 IDEDTEQKMFTEERVAMLKELAAKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRK 490
>sp|P24279|MCM3_YEAST DNA replication licensing factor MCM3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM3 PE=1 SV=1
Length = 971
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 86 YSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
+ L+ SLAP IYGH+ +KKA+LL+L+GGV+++
Sbjct: 360 FDILSQSLAPSIYGHDHIKKAILLMLMGGVEKN 392
>sp|P97310|MCM2_MOUSE DNA replication licensing factor MCM2 OS=Mus musculus GN=Mcm2 PE=1
SV=3
Length = 904
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 62 ALEDDKPA-GTLSEEEMAELGG----DQFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
A +D+K A G L++E++ + G Q K+ AS+AP IYGHED+K+ L L L GG
Sbjct: 445 AKKDNKVAVGELTDEDVKMITGLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGG 502
>sp|Q5ZMN2|MCM3_CHICK DNA replication licensing factor MCM3 OS=Gallus gallus GN=MCM3 PE=2
SV=1
Length = 812
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 85 FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+++LA SLAP I+GHE +KKALL +L+GGV++
Sbjct: 296 IFNQLARSLAPSIHGHEFIKKALLCMLLGGVEK 328
>sp|Q9FL33|MCM3_ARATH DNA replication licensing factor MCM3 homolog OS=Arabidopsis
thaliana GN=MCM3 PE=2 SV=1
Length = 776
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 83 DQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
D + LA SLAP IYGH +KKA++LL++GGV+++
Sbjct: 283 DDAFDLLARSLAPSIYGHAWIKKAVVLLMLGGVEKN 318
>sp|Q6DIH3|MCM2_XENTR DNA replication licensing factor mcm2 OS=Xenopus tropicalis GN=mcm2
PE=2 SV=1
Length = 884
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 64 EDDKPA-GTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
+DDK A G L++E++ + ++ ++ AS+AP IYGHED+K+ L L L GG
Sbjct: 432 KDDKVAVGELTDEDVKAIVALSKDERIGERIFASIAPSIYGHEDIKRGLALALFGG 487
>sp|P55861|MCM2_XENLA DNA replication licensing factor mcm2 OS=Xenopus laevis GN=mcm2
PE=1 SV=2
Length = 886
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 64 EDDKPA-GTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
+DDK A G L++E++ + ++ ++ AS+AP IYGHED+K+ L L L GG
Sbjct: 432 KDDKVAVGELTDEDVKAIVALSKDERIGERIFASIAPSIYGHEDIKRGLALALFGG 487
>sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1
SV=4
Length = 904
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 62 ALEDDKPA-GTLSEEE---MAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
A +D+K A G L++E+ + L DQ K+ AS+AP IYGHED+K+ L L L GG
Sbjct: 445 AKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGG 502
>sp|P33991|MCM4_HUMAN DNA replication licensing factor MCM4 OS=Homo sapiens GN=MCM4 PE=1
SV=5
Length = 863
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 85 FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
Y +LA++LAP IY HED+KK +LL L GG +
Sbjct: 458 IYERLASALAPSIYEHEDIKKGILLQLFGGTRK 490
>sp|P49717|MCM4_MOUSE DNA replication licensing factor MCM4 OS=Mus musculus GN=Mcm4 PE=2
SV=1
Length = 862
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 85 FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
Y +LA++LAP IY HED+KK +LL L GG +
Sbjct: 457 IYERLASALAPSIYEHEDIKKGILLQLFGGTRK 489
>sp|P29458|MCM4_SCHPO DNA replication licensing factor mcm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm4 PE=1 SV=2
Length = 931
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 72 LSEEEMAELGG----DQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
+S+EE+ ++ D Y L+ SLAP IY +DVKK LLL L GG ++S
Sbjct: 476 ISDEEVEKIQQVSKRDDIYDILSRSLAPSIYEMDDVKKGLLLQLFGGTNKS 526
>sp|P30666|MCM3_SCHPO DNA replication licensing factor mcm3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm3 PE=1 SV=2
Length = 879
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 86 YSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
+ L+ SLAP IYG+E VK+A+LLLL+GG +++
Sbjct: 307 FELLSTSLAPSIYGYEYVKQAILLLLLGGTEKN 339
>sp|P38132|MCM7_YEAST DNA replication licensing factor MCM7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM7 PE=1 SV=4
Length = 845
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 44 GLLSDTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFYSKLAASLAPEIYGH 100
GLL++TY+EAQ ++ K + E M + Y++LA S+APEIYG+
Sbjct: 369 GLLTETYLEAQFVRQHKKKFASFSLTSDVEERVMELITSGDVYNRLAKSIAPEIYGN 425
>sp|Q24849|MCM3_ENTHI DNA replication licensing factor MCM3 OS=Entamoeba histolytica
GN=MCM3 PE=3 SV=1
Length = 597
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 77 MAELGGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
M E +SK S+AP IYGH DVKKA+LL+LVG +
Sbjct: 175 MKEENPINLFSK---SIAPSIYGHSDVKKAILLMLVGATPK 212
>sp|P40377|MCM2_SCHPO DNA replication licensing factor mcm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm2 PE=1 SV=1
Length = 830
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 49 TYIEAQRIQCL--SKALEDDKPAGTLSEEEMAEL----GGDQFYSKLAASLAPEIYGHED 102
T IEA I L S +DD L+++E E+ ++++ AS+AP IYGH
Sbjct: 442 TIIEANHISQLDGSGNTDDDFSLSRLTDDEEREIRALAKSPDIHNRIIASMAPSIYGHRS 501
Query: 103 VKKALLLLLVGGVDRS 118
+K A+ L GGV ++
Sbjct: 502 IKTAIAAALFGGVPKN 517
>sp|Q9UXG1|MCM_SULSO Minichromosome maintenance protein MCM OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=MCM
PE=1 SV=1
Length = 686
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 48 DTYIEAQRIQCLSKALEDDKPAGTLSEEEMAELGGDQFY-SKLAASLAPEIYGHEDVKKA 106
D Y++ I+ K L D+ E+++ +L D + ++ +S+AP IYGH ++K+A
Sbjct: 254 DIYMKVSSIEVSQKVL-DEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEA 312
Query: 107 LLLLLVGGVDR 117
L L L GGV +
Sbjct: 313 LALALFGGVPK 323
>sp|P49739|MCM3M_XENLA Maternal DNA replication licensing factor mcm3 OS=Xenopus laevis
GN=mmcm3 PE=1 SV=2
Length = 807
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Query: 49 TYIEAQRIQCLSKALEDDKPAGTLSEEEMAELG------GDQFYSKLAASLAPEIYGHED 102
T + A I+ +SK + A T S +++A++ + L+ SLAP I+GHE
Sbjct: 258 TILLANNIKLMSKEI-----APTFSADDVAKIKKFCKAHSKDIFEHLSKSLAPSIHGHEY 312
Query: 103 VKKALLLLLVGGVDR 117
+KKA+L +L+GG ++
Sbjct: 313 IKKAILCMLLGGNEK 327
>sp|P30665|MCM4_YEAST DNA replication licensing factor MCM4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM4 PE=1 SV=2
Length = 933
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 72 LSEEEMAEL----GGDQFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
++++++A++ + YS LA S+AP IY EDVKK +LL L GG +++
Sbjct: 501 ITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVKKGILLQLFGGTNKT 551
>sp|Q86B14|MCM6_DICDI DNA replication licensing factor mcm6 OS=Dictyostelium discoideum
GN=mcm6 PE=3 SV=1
Length = 867
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 84 QFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+ Y L S+ P I+GHE++K+ +LL+L GGV +
Sbjct: 419 KIYQNLVNSICPSIFGHEEIKRGVLLMLFGGVHK 452
>sp|Q9SX03|MCM33_MAIZE DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3
PE=2 SV=1
Length = 768
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 49 TYIEAQRIQCLSKALEDDKPAGTLSE-EEMAELGG-DQFYSKLAASLAPEIYGHEDVKKA 106
T + A + L+K E + P T + + M E+ + + L SLAP IYGH +KKA
Sbjct: 254 TVLIANNVSLLNK--EANAPVYTREDLKRMKEISRRNDTFDLLGNSLAPSIYGHLWIKKA 311
Query: 107 LLLLLVGGVDRS 118
++LL++GGV+++
Sbjct: 312 VVLLMLGGVEKN 323
>sp|Q9SX04|MCM32_MAIZE DNA replication licensing factor MCM3 homolog 2 OS=Zea mays GN=ROA2
PE=2 SV=1
Length = 768
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 49 TYIEAQRIQCLSKALEDDKPAGTLSE-EEMAELGG-DQFYSKLAASLAPEIYGHEDVKKA 106
T + A + L+K E + P T + + M E+ + + L SLAP IYGH +KKA
Sbjct: 254 TVLIANNVSLLNK--EANAPVYTREDLKRMKEISRRNDTFDLLGNSLAPSIYGHLWIKKA 311
Query: 107 LLLLLVGGVDRS 118
++LL++GGV+++
Sbjct: 312 VVLLMLGGVEKN 323
>sp|Q43704|MCM31_MAIZE DNA replication licensing factor MCM3 homolog 1 OS=Zea mays GN=ROA1
PE=2 SV=2
Length = 768
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 49 TYIEAQRIQCLSKALEDDKPAGTLSE-EEMAELGG-DQFYSKLAASLAPEIYGHEDVKKA 106
T + A + L+K E + P T + + M E+ + + L SLAP IYGH +KKA
Sbjct: 254 TVLIANNVSLLNK--EANAPVYTREDLKRMKEISRRNDTFDLLGNSLAPSIYGHLWIKKA 311
Query: 107 LLLLLVGGVDRS 118
++LL++GGV+++
Sbjct: 312 VVLLMLGGVEKN 323
>sp|Q6PCI7|MCM5B_XENLA DNA replication licensing factor mcm5-B OS=Xenopus laevis GN=mcm5-b
PE=2 SV=1
Length = 735
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 12 KHWILGLLRYWQNPTMLQNYCILHGLFVCSSPGLLS------------DTYIEAQRIQCL 59
+H L RY + + N + G++ G S +YI IQ
Sbjct: 244 RHMQLYCDRYLCDKVVPGNRVTIMGIYSIQKSGKTSTKGRDRVGVGIRSSYIRVVGIQVD 303
Query: 60 SKALEDDKPAGTLS---EEEMAELG-GDQFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
++ AGT++ EEE L Y +A S+AP IYG D+KKA+ LL GG
Sbjct: 304 TEGT-GRSAAGTITPQEEEEFRRLAVKPDIYETVAKSIAPSIYGSTDIKKAIACLLFGG 361
>sp|Q62724|MCM6_RAT DNA replication licensing factor MCM6 (Fragment) OS=Rattus
norvegicus GN=Mcm6 PE=2 SV=2
Length = 507
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 75 EEMAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
E++ E+ DQ Y L SL P I+G+++VK+ +LL+L GGV ++
Sbjct: 21 EKVFEMSQDQNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKT 65
>sp|P29496|MCM5_YEAST Minichromosome maintenance protein 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM5 PE=1 SV=1
Length = 775
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 84 QFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
+ Y L S+AP I+G+ED+KKA++ LL+GG
Sbjct: 365 KLYEILTNSIAPSIFGNEDIKKAIVCLLMGG 395
>sp|Q7ZY18|MC6ZB_XENLA Zygotic DNA replication licensing factor mcm6-B OS=Xenopus laevis
GN=zmcm6-b PE=1 SV=1
Length = 825
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 75 EEMAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
E++ E+ D+ Y L SL P ++G+++VK+ +LL+L GGV +S
Sbjct: 336 EKVFEMSQDKNLYHNLCTSLFPTVHGNDEVKRGILLMLFGGVPKS 380
>sp|Q498J7|MC6ZA_XENLA Zygotic DNA replication licensing factor mcm6-A OS=Xenopus laevis
GN=zmcm6-a PE=1 SV=1
Length = 823
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 75 EEMAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
E++ E+ D+ Y L SL P ++G+++VK+ +LL+L GGV +S
Sbjct: 336 EKVFEMSQDKNLYHNLCTSLFPTVHGNDEVKRGILLMLFGGVPKS 380
>sp|P55862|MCM5A_XENLA DNA replication licensing factor mcm5-A OS=Xenopus laevis GN=mcm5-a
PE=1 SV=2
Length = 735
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 74 EEEMAELGGD-QFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
EEE L Y +A S+AP IYG D+KKA+ LL GG
Sbjct: 320 EEEFRRLAAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGG 361
>sp|Q7ZXZ0|MCM3Z_XENLA Zygotic DNA replication licensing factor mcm3 OS=Xenopus laevis
GN=zmcm3 PE=1 SV=1
Length = 806
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 86 YSKLAASLAPEIYGHEDVKKALLLLLVGGVDR 117
+ +L+ SLAP I+GH +KKA+L +L+GGV++
Sbjct: 296 FEQLSRSLAPSIHGHSYIKKAILCMLLGGVEK 327
>sp|Q561P5|MCM5_XENTR DNA replication licensing factor mcm5 OS=Xenopus tropicalis GN=mcm5
PE=2 SV=1
Length = 735
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 74 EEEMAELGGD-QFYSKLAASLAPEIYGHEDVKKALLLLLVGG 114
EEE L Y +A S+AP IYG D+KKA+ LL GG
Sbjct: 320 EEEFRRLSAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGG 361
>sp|Q7Q0Q1|MCM6_ANOGA DNA replication licensing factor Mcm6 OS=Anopheles gambiae GN=Mcm6
PE=3 SV=3
Length = 814
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 84 QFYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
+ Y L SL P IYG+++VK+ +LL+L GGV ++
Sbjct: 338 RLYQNLINSLFPSIYGNDEVKRGILLMLFGGVAKT 372
>sp|P97311|MCM6_MOUSE DNA replication licensing factor MCM6 OS=Mus musculus GN=Mcm6 PE=1
SV=1
Length = 821
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 75 EEMAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
E++ E+ D+ Y L SL P I+G+++VK+ +LL+L GGV ++
Sbjct: 335 EKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKT 379
>sp|Q14566|MCM6_HUMAN DNA replication licensing factor MCM6 OS=Homo sapiens GN=MCM6 PE=1
SV=1
Length = 821
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 75 EEMAELGGDQ-FYSKLAASLAPEIYGHEDVKKALLLLLVGGVDRS 118
E++ E+ D+ Y L SL P I+G+++VK+ +LL+L GGV ++
Sbjct: 335 EKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKT 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,188,116
Number of Sequences: 539616
Number of extensions: 1653944
Number of successful extensions: 3893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3801
Number of HSP's gapped (non-prelim): 94
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)